Query psy1288
Match_columns 1012
No_of_seqs 672 out of 4942
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 22:07:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1288.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1288hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 6.6E-88 1.4E-92 751.4 58.6 616 36-722 4-681 (682)
2 PRK10115 protease 2; Provision 100.0 5E-77 1.1E-81 719.5 70.4 611 38-722 2-678 (686)
3 KOG2237|consensus 100.0 6.3E-78 1.4E-82 663.9 42.0 626 35-722 3-708 (712)
4 COG1505 Serine proteases of th 100.0 2.2E-70 4.8E-75 602.6 48.1 587 56-720 2-647 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 7.5E-39 1.6E-43 372.5 40.1 342 39-390 1-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 9.4E-36 2E-40 359.1 49.5 515 112-722 68-619 (620)
7 COG1770 PtrB Protease II [Amin 100.0 9.3E-32 2E-36 301.8 13.5 133 854-1000 340-476 (682)
8 PRK10115 protease 2; Provision 100.0 1.5E-26 3.2E-31 280.6 34.6 198 644-870 443-657 (686)
9 COG1506 DAP2 Dipeptidyl aminop 99.9 4.2E-27 9.1E-32 284.1 19.1 205 643-882 391-611 (620)
10 KOG2100|consensus 99.9 7.8E-22 1.7E-26 239.6 49.6 337 306-722 398-750 (755)
11 KOG2281|consensus 99.9 2.3E-23 5E-28 229.9 31.5 334 309-718 517-866 (867)
12 KOG2237|consensus 99.9 5.1E-26 1.1E-30 253.0 10.3 110 888-1005 390-502 (712)
13 PF00326 Peptidase_S9: Prolyl 99.9 5.7E-25 1.2E-29 231.7 14.1 208 449-722 2-212 (213)
14 COG1505 Serine proteases of th 99.9 2.5E-22 5.4E-27 223.2 13.1 164 686-873 452-631 (648)
15 PRK01029 tolB translocation pr 99.7 7.5E-16 1.6E-20 178.3 29.7 261 95-373 126-402 (428)
16 PF00326 Peptidase_S9: Prolyl 99.7 1.4E-18 3.1E-23 182.9 0.6 183 668-881 5-203 (213)
17 KOG2100|consensus 99.7 2.4E-14 5.2E-19 174.6 35.2 191 643-871 523-731 (755)
18 PRK05137 tolB translocation pr 99.7 8E-15 1.7E-19 171.5 29.6 235 114-373 164-411 (435)
19 PRK04043 tolB translocation pr 99.7 3E-14 6.5E-19 163.9 30.5 228 117-373 156-399 (419)
20 PRK04043 tolB translocation pr 99.7 4.3E-15 9.3E-20 170.8 23.1 214 109-348 193-419 (419)
21 PRK03629 tolB translocation pr 99.7 3.8E-14 8.2E-19 164.9 30.1 233 115-373 163-405 (429)
22 TIGR02800 propeller_TolB tol-p 99.7 2.1E-14 4.6E-19 167.8 28.1 270 78-373 118-396 (417)
23 PRK04792 tolB translocation pr 99.6 2.1E-13 4.5E-18 159.3 30.4 234 114-373 181-424 (448)
24 PRK04792 tolB translocation pr 99.6 3.5E-14 7.5E-19 165.9 23.4 215 109-350 223-446 (448)
25 PRK13604 luxD acyl transferase 99.6 2E-14 4.4E-19 154.4 19.6 228 407-701 13-248 (307)
26 PRK02889 tolB translocation pr 99.6 2.4E-13 5.3E-18 158.3 30.4 230 116-373 164-402 (427)
27 PRK03629 tolB translocation pr 99.6 3.6E-14 7.7E-19 165.1 23.3 215 109-350 204-427 (429)
28 PRK01029 tolB translocation pr 99.6 6.1E-14 1.3E-18 162.5 23.9 219 108-352 189-426 (428)
29 PRK10566 esterase; Provisional 99.6 4.5E-14 9.8E-19 152.6 20.5 231 416-720 12-249 (249)
30 PRK04922 tolB translocation pr 99.6 3.2E-13 7E-18 157.8 29.2 235 113-373 165-410 (433)
31 PRK02889 tolB translocation pr 99.6 6.8E-14 1.5E-18 162.9 23.0 220 109-350 201-424 (427)
32 PRK00178 tolB translocation pr 99.6 4.7E-13 1E-17 156.8 30.2 235 113-373 160-405 (430)
33 PRK00178 tolB translocation pr 99.6 8.1E-14 1.8E-18 163.2 23.1 214 110-350 205-427 (430)
34 PLN02442 S-formylglutathione h 99.6 6.9E-14 1.5E-18 153.4 19.7 247 402-720 17-281 (283)
35 PRK04922 tolB translocation pr 99.6 1.4E-13 3.1E-18 160.7 23.1 215 109-350 209-432 (433)
36 PRK05137 tolB translocation pr 99.6 1.9E-13 4.1E-18 160.0 22.6 212 110-350 208-432 (435)
37 TIGR02821 fghA_ester_D S-formy 99.6 1.8E-13 3.9E-18 149.8 20.3 242 405-719 15-274 (275)
38 PLN02298 hydrolase, alpha/beta 99.5 2E-12 4.2E-17 146.0 25.9 143 396-545 25-167 (330)
39 PRK10162 acetyl esterase; Prov 99.5 1.4E-12 3E-17 145.7 23.4 246 402-721 56-317 (318)
40 COG0412 Dienelactone hydrolase 99.5 1.3E-12 2.7E-17 138.4 20.3 215 405-721 4-235 (236)
41 PF01738 DLH: Dienelactone hyd 99.5 1.8E-13 4E-18 144.5 13.8 205 416-720 1-218 (218)
42 COG3458 Acetyl esterase (deace 99.5 5.1E-13 1.1E-17 135.5 15.5 251 397-719 50-317 (321)
43 PF05448 AXE1: Acetyl xylan es 99.5 3.6E-13 7.7E-18 148.6 15.3 250 399-719 52-320 (320)
44 TIGR01840 esterase_phb esteras 99.5 9.1E-13 2E-17 138.5 16.5 125 419-545 2-128 (212)
45 PRK05077 frsA fermentation/res 99.5 4.9E-12 1.1E-16 145.7 24.0 133 401-545 166-298 (414)
46 KOG1455|consensus 99.5 3.6E-12 7.8E-17 132.8 19.0 260 404-719 28-312 (313)
47 PRK01742 tolB translocation pr 99.4 4E-11 8.7E-16 139.9 29.6 198 109-373 162-360 (429)
48 COG0823 TolB Periplasmic compo 99.4 4E-12 8.6E-17 145.1 19.4 223 108-350 197-423 (425)
49 PRK01742 tolB translocation pr 99.4 9.8E-12 2.1E-16 145.0 23.0 211 109-351 209-426 (429)
50 PLN02385 hydrolase; alpha/beta 99.4 1.1E-11 2.4E-16 141.0 22.8 136 402-545 60-195 (349)
51 PHA02857 monoglyceride lipase; 99.4 2.5E-11 5.4E-16 133.3 22.6 265 408-720 5-274 (276)
52 TIGR02800 propeller_TolB tol-p 99.4 2.6E-11 5.7E-16 141.7 23.3 214 109-349 195-417 (417)
53 PRK05371 x-prolyl-dipeptidyl a 99.4 4.4E-11 9.6E-16 146.7 24.6 238 454-723 271-523 (767)
54 PF00930 DPPIV_N: Dipeptidyl p 99.4 9.5E-11 2.1E-15 133.1 24.2 255 112-390 1-325 (353)
55 PRK11460 putative hydrolase; P 99.4 3.6E-11 7.9E-16 127.8 19.2 187 430-722 14-211 (232)
56 COG0657 Aes Esterase/lipase [L 99.3 2.3E-11 5E-16 136.0 17.4 241 410-717 58-308 (312)
57 PRK10749 lysophospholipase L2; 99.3 3.1E-10 6.8E-15 127.9 21.7 130 404-545 31-164 (330)
58 COG2267 PldB Lysophospholipase 99.2 2.2E-10 4.8E-15 125.9 18.6 128 405-545 11-140 (298)
59 COG1647 Esterase/lipase [Gener 99.2 3.4E-11 7.4E-16 119.4 10.7 217 431-717 14-242 (243)
60 PF10503 Esterase_phd: Esteras 99.2 1.7E-10 3.7E-15 119.4 15.3 128 416-545 1-130 (220)
61 PF07859 Abhydrolase_3: alpha/ 99.2 6.6E-11 1.4E-15 124.4 11.9 200 435-698 1-209 (211)
62 COG0823 TolB Periplasmic compo 99.2 2.1E-09 4.5E-14 123.0 22.6 226 124-373 167-401 (425)
63 PLN02652 hydrolase; alpha/beta 99.2 2E-09 4.3E-14 123.1 21.2 274 402-722 109-390 (395)
64 KOG1552|consensus 99.2 6.1E-10 1.3E-14 114.2 14.8 202 404-702 36-238 (258)
65 KOG1515|consensus 99.1 2.9E-09 6.3E-14 116.9 20.6 246 413-718 71-334 (336)
66 KOG2281|consensus 99.1 9.9E-11 2.1E-15 131.0 9.2 199 643-875 639-855 (867)
67 PF02129 Peptidase_S15: X-Pro 99.1 1.5E-10 3.3E-15 126.6 10.0 133 412-554 1-140 (272)
68 PF02230 Abhydrolase_2: Phosph 99.1 9.8E-10 2.1E-14 115.8 15.1 190 430-719 12-215 (216)
69 TIGR00976 /NonD putative hydro 99.1 1.9E-09 4.1E-14 129.8 19.5 128 409-545 2-130 (550)
70 PF00930 DPPIV_N: Dipeptidyl p 99.1 7.4E-09 1.6E-13 117.7 22.7 249 107-366 46-353 (353)
71 KOG4391|consensus 99.1 1.9E-09 4.2E-14 105.7 15.1 236 399-722 50-285 (300)
72 COG4946 Uncharacterized protei 99.0 1.8E-07 4E-12 101.4 28.4 96 113-221 48-146 (668)
73 TIGR01607 PST-A Plasmodium sub 99.0 7E-09 1.5E-13 116.7 18.6 133 408-545 2-183 (332)
74 COG4099 Predicted peptidase [G 99.0 1.7E-09 3.6E-14 111.3 12.0 126 412-545 170-302 (387)
75 PF12695 Abhydrolase_5: Alpha/ 99.0 4.8E-09 1E-13 102.7 13.8 145 434-697 1-145 (145)
76 COG0429 Predicted hydrolase of 99.0 3.2E-08 6.9E-13 105.1 18.5 271 405-721 51-342 (345)
77 PLN02511 hydrolase 99.0 5.4E-08 1.2E-12 111.8 21.9 136 403-545 71-208 (388)
78 COG0400 Predicted esterase [Ge 98.9 2.7E-08 5.8E-13 102.0 15.8 124 495-719 82-205 (207)
79 PRK10985 putative hydrolase; P 98.9 3.1E-08 6.8E-13 111.3 17.5 132 405-545 33-166 (324)
80 PF06500 DUF1100: Alpha/beta h 98.9 2.5E-08 5.3E-13 111.0 15.2 133 400-545 162-294 (411)
81 PF12715 Abhydrolase_7: Abhydr 98.8 8E-09 1.7E-13 112.6 9.1 141 399-543 84-256 (390)
82 TIGR03611 RutD pyrimidine util 98.8 8.2E-08 1.8E-12 103.5 17.0 102 431-545 12-113 (257)
83 TIGR03100 hydr1_PEP hydrolase, 98.8 2.5E-07 5.4E-12 101.3 20.5 128 405-545 4-132 (274)
84 TIGR03343 biphenyl_bphD 2-hydr 98.8 5E-08 1.1E-12 107.4 14.7 102 432-545 30-134 (282)
85 COG3509 LpqC Poly(3-hydroxybut 98.8 2.5E-07 5.4E-12 96.7 18.2 127 412-545 43-177 (312)
86 PLN02872 triacylglycerol lipas 98.8 7.7E-08 1.7E-12 109.7 14.8 144 398-545 39-195 (395)
87 PLN00021 chlorophyllase 98.8 2.9E-07 6.4E-12 101.7 18.8 115 414-545 37-164 (313)
88 PLN02442 S-formylglutathione h 98.8 1.6E-08 3.4E-13 111.1 8.5 110 734-868 149-264 (283)
89 PRK00870 haloalkane dehalogena 98.7 6.3E-07 1.4E-11 99.8 19.8 128 403-545 21-148 (302)
90 PRK10566 esterase; Provisional 98.7 2.7E-08 5.9E-13 107.4 8.5 62 795-868 172-234 (249)
91 TIGR02427 protocat_pcaD 3-oxoa 98.7 1.6E-07 3.5E-12 100.4 14.1 101 431-545 12-112 (251)
92 COG2945 Predicted hydrolase of 98.7 2E-07 4.3E-12 91.0 12.4 100 430-536 26-127 (210)
93 COG2936 Predicted acyl esteras 98.7 4.5E-07 9.7E-12 104.4 16.8 136 401-545 17-157 (563)
94 PRK11071 esterase YqiA; Provis 98.7 6.7E-07 1.5E-11 91.9 16.7 87 433-545 2-91 (190)
95 TIGR03101 hydr2_PEP hydrolase, 98.6 1.9E-06 4E-11 92.8 19.3 129 406-545 3-132 (266)
96 TIGR01249 pro_imino_pep_1 prol 98.6 1.3E-06 2.9E-11 97.4 18.9 120 408-545 9-128 (306)
97 PF08840 BAAT_C: BAAT / Acyl-C 98.6 3E-07 6.6E-12 96.1 12.7 51 494-545 4-54 (213)
98 TIGR01250 pro_imino_pep_2 prol 98.6 7.7E-07 1.7E-11 97.5 16.5 105 432-545 25-129 (288)
99 PRK03592 haloalkane dehalogena 98.6 2.9E-06 6.3E-11 94.1 20.8 112 412-545 15-126 (295)
100 TIGR02821 fghA_ester_D S-formy 98.6 9E-08 2E-12 104.8 8.5 61 797-869 198-259 (275)
101 PLN03087 BODYGUARD 1 domain co 98.6 2.4E-06 5.1E-11 99.4 19.8 120 412-545 184-307 (481)
102 TIGR03056 bchO_mg_che_rel puta 98.6 1.4E-06 3.1E-11 95.4 17.3 101 432-545 28-128 (278)
103 PRK10439 enterobactin/ferric e 98.6 3.6E-06 7.8E-11 96.7 20.9 132 404-545 181-321 (411)
104 PRK10673 acyl-CoA esterase; Pr 98.6 3E-06 6.6E-11 91.6 19.0 102 429-545 13-114 (255)
105 PF14583 Pectate_lyase22: Olig 98.6 1E-05 2.2E-10 89.2 22.5 231 140-390 21-281 (386)
106 TIGR02240 PHA_depoly_arom poly 98.6 1.5E-06 3.1E-11 95.5 16.4 115 412-545 10-124 (276)
107 PLN02824 hydrolase, alpha/beta 98.6 1.5E-06 3.3E-11 96.3 16.6 107 432-545 29-135 (294)
108 PF12697 Abhydrolase_6: Alpha/ 98.5 4.2E-07 9.1E-12 95.4 9.8 99 435-545 1-99 (228)
109 TIGR03695 menH_SHCHC 2-succiny 98.5 3.2E-06 6.9E-11 90.1 16.7 101 433-545 2-103 (251)
110 KOG1838|consensus 98.5 5.5E-06 1.2E-10 91.8 18.2 137 402-545 92-234 (409)
111 TIGR01738 bioH putative pimelo 98.5 1.9E-06 4E-11 91.9 14.2 94 433-545 5-98 (245)
112 KOG4667|consensus 98.5 4E-06 8.7E-11 83.0 14.8 231 403-702 10-244 (269)
113 PLN02965 Probable pheophorbida 98.5 6.9E-06 1.5E-10 89.0 18.6 100 434-545 5-105 (255)
114 TIGR01836 PHA_synth_III_C poly 98.5 4.8E-06 1E-10 94.7 18.1 103 432-545 63-169 (350)
115 PRK03204 haloalkane dehalogena 98.5 4.8E-06 1E-10 91.9 17.3 101 432-545 34-134 (286)
116 PRK06489 hypothetical protein; 98.4 6.8E-06 1.5E-10 93.9 18.9 109 432-545 69-187 (360)
117 KOG4627|consensus 98.4 7.8E-07 1.7E-11 87.1 9.3 182 430-697 65-247 (270)
118 COG2272 PnbA Carboxylesterase 98.4 5E-07 1.1E-11 101.3 9.1 127 410-545 76-215 (491)
119 KOG3043|consensus 98.4 2E-06 4.3E-11 86.2 12.1 165 455-720 60-241 (242)
120 PLN02894 hydrolase, alpha/beta 98.4 9.9E-06 2.2E-10 93.6 19.9 106 430-545 103-209 (402)
121 PLN02679 hydrolase, alpha/beta 98.4 1.1E-05 2.4E-10 92.0 19.6 100 433-545 89-189 (360)
122 COG4946 Uncharacterized protei 98.4 6.1E-05 1.3E-09 82.3 23.4 234 107-366 227-514 (668)
123 PRK14875 acetoin dehydrogenase 98.4 8.1E-06 1.8E-10 93.7 18.4 101 431-545 130-230 (371)
124 PRK07581 hypothetical protein; 98.4 3.7E-06 8.1E-11 95.3 15.0 129 412-545 24-157 (339)
125 cd00312 Esterase_lipase Estera 98.4 8.7E-07 1.9E-11 105.9 10.1 126 416-545 79-211 (493)
126 PRK13616 lipoprotein LpqB; Pro 98.4 1.4E-05 3.1E-10 95.5 20.0 101 110-221 356-466 (591)
127 PF14583 Pectate_lyase22: Olig 98.4 0.00011 2.3E-09 81.3 25.0 243 109-373 41-382 (386)
128 PRK00175 metX homoserine O-ace 98.3 1.2E-05 2.7E-10 92.3 17.2 111 432-545 48-180 (379)
129 PRK05371 x-prolyl-dipeptidyl a 98.3 3.8E-06 8.2E-11 103.7 12.7 62 794-870 441-502 (767)
130 TIGR01392 homoserO_Ac_trn homo 98.3 1.7E-05 3.7E-10 90.3 17.3 129 412-545 14-160 (351)
131 PF03583 LIP: Secretory lipase 98.3 1.1E-05 2.5E-10 88.4 15.0 66 644-722 218-284 (290)
132 PLN02578 hydrolase 98.3 2.5E-05 5.3E-10 89.1 18.0 98 433-545 87-185 (354)
133 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 0.00053 1.2E-08 75.6 28.2 235 111-373 38-278 (300)
134 PF12740 Chlorophyllase2: Chlo 98.3 2.9E-05 6.3E-10 81.7 16.4 112 417-545 5-129 (259)
135 PRK10349 carboxylesterase BioH 98.2 1.5E-05 3.2E-10 86.4 14.6 94 433-545 14-107 (256)
136 TIGR03866 PQQ_ABC_repeats PQQ- 98.2 0.0012 2.7E-08 72.6 29.8 217 131-373 12-236 (300)
137 KOG4178|consensus 98.2 0.00012 2.6E-09 78.6 20.2 105 430-545 42-146 (322)
138 PLN02211 methyl indole-3-aceta 98.2 3.6E-05 7.7E-10 84.3 16.5 106 429-545 15-120 (273)
139 PRK13604 luxD acyl transferase 98.2 4.6E-06 9.9E-11 90.4 7.9 57 798-870 192-248 (307)
140 PF00135 COesterase: Carboxyle 98.1 3.6E-06 7.7E-11 101.9 7.9 129 416-545 109-243 (535)
141 KOG2984|consensus 98.1 5.5E-06 1.2E-10 81.0 6.8 109 434-550 44-152 (277)
142 PRK11126 2-succinyl-6-hydroxy- 98.1 4.2E-05 9.1E-10 81.9 14.6 97 433-545 3-100 (242)
143 PRK08775 homoserine O-acetyltr 98.1 9.3E-05 2E-09 84.0 17.4 73 461-545 98-171 (343)
144 PRK10162 acetyl esterase; Prov 98.1 1.4E-05 3E-10 89.4 10.4 47 814-869 247-293 (318)
145 PRK11460 putative hydrolase; P 98.0 1.4E-05 3.1E-10 85.0 7.6 48 815-869 148-195 (232)
146 KOG3101|consensus 98.0 2.7E-05 5.8E-10 76.9 8.6 131 413-545 25-174 (283)
147 PF00756 Esterase: Putative es 97.9 1.4E-05 3E-10 86.3 6.7 131 413-545 5-148 (251)
148 COG0657 Aes Esterase/lipase [L 97.9 6E-05 1.3E-09 84.3 11.5 190 644-869 77-290 (312)
149 PLN03084 alpha/beta hydrolase 97.9 9.8E-05 2.1E-09 84.2 13.1 120 410-545 111-230 (383)
150 PRK06765 homoserine O-acetyltr 97.9 0.00024 5.2E-09 81.3 16.2 85 459-545 96-194 (389)
151 PRK13616 lipoprotein LpqB; Pro 97.9 0.00026 5.6E-09 84.9 17.0 164 158-373 351-526 (591)
152 PLN02980 2-oxoglutarate decarb 97.9 0.00021 4.6E-09 96.1 18.0 109 431-545 1370-1478(1655)
153 PF01738 DLH: Dienelactone hyd 97.9 7.5E-06 1.6E-10 86.4 3.5 52 813-871 143-194 (218)
154 COG0627 Predicted esterase [Ge 97.9 8.9E-05 1.9E-09 81.4 11.8 232 429-722 51-314 (316)
155 PF03403 PAF-AH_p_II: Platelet 97.8 9.2E-05 2E-09 84.2 11.5 112 430-545 98-260 (379)
156 PRK05855 short chain dehydroge 97.8 0.00029 6.3E-09 86.2 16.2 107 409-532 8-114 (582)
157 KOG0293|consensus 97.8 0.00099 2.1E-08 72.1 17.2 198 157-374 225-425 (519)
158 KOG4409|consensus 97.8 0.00034 7.3E-09 75.4 13.7 102 432-545 90-193 (365)
159 TIGR01838 PHA_synth_I poly(R)- 97.7 0.00069 1.5E-08 79.9 16.9 105 433-545 189-300 (532)
160 KOG0279|consensus 97.7 0.011 2.3E-07 61.4 22.9 189 156-361 63-304 (315)
161 COG4757 Predicted alpha/beta h 97.7 0.00034 7.4E-09 70.6 12.0 119 406-534 8-126 (281)
162 PF08662 eIF2A: Eukaryotic tra 97.7 0.0015 3.2E-08 67.4 16.9 136 111-266 13-163 (194)
163 KOG0271|consensus 97.7 0.0016 3.4E-08 70.0 17.0 62 157-223 116-178 (480)
164 KOG1454|consensus 97.7 0.00051 1.1E-08 76.7 14.1 102 430-541 56-157 (326)
165 KOG2112|consensus 97.7 0.00045 9.8E-09 69.3 11.9 61 645-718 143-203 (206)
166 TIGR02658 TTQ_MADH_Hv methylam 97.7 0.025 5.3E-07 63.3 26.8 99 114-221 11-123 (352)
167 cd00707 Pancreat_lipase_like P 97.7 0.00017 3.7E-09 78.7 9.7 111 430-545 34-145 (275)
168 TIGR02658 TTQ_MADH_Hv methylam 97.7 0.029 6.2E-07 62.7 27.2 246 110-373 52-329 (352)
169 PF08662 eIF2A: Eukaryotic tra 97.6 0.0028 6E-08 65.3 17.8 148 160-361 9-164 (194)
170 COG2819 Predicted hydrolase of 97.6 0.00052 1.1E-08 71.9 12.4 135 408-545 14-170 (264)
171 PF10282 Lactonase: Lactonase, 97.6 0.031 6.8E-07 63.3 27.9 244 106-373 39-323 (345)
172 KOG0293|consensus 97.6 0.0019 4.2E-08 69.9 16.4 99 112-223 233-333 (519)
173 PF07224 Chlorophyllase: Chlor 97.6 0.0011 2.3E-08 68.5 13.0 114 415-545 32-155 (307)
174 KOG1552|consensus 97.5 0.00038 8.2E-09 72.2 9.6 165 647-868 61-235 (258)
175 KOG2564|consensus 97.5 0.00034 7.4E-09 72.5 9.0 115 405-532 52-166 (343)
176 PF06821 Ser_hydrolase: Serine 97.5 0.00097 2.1E-08 67.0 12.3 57 644-716 113-169 (171)
177 PF08538 DUF1749: Protein of u 97.5 0.00018 4E-09 77.2 7.4 109 433-552 34-150 (303)
178 PF08450 SGL: SMP-30/Gluconola 97.5 0.048 1E-06 58.6 26.3 216 115-360 11-245 (246)
179 PRK05077 frsA fermentation/res 97.5 0.00043 9.2E-09 80.2 10.3 40 813-863 353-392 (414)
180 TIGR01840 esterase_phb esteras 97.4 0.00033 7.2E-09 73.5 7.9 32 813-844 166-197 (212)
181 KOG3847|consensus 97.4 0.0026 5.6E-08 67.1 13.9 113 429-545 115-273 (399)
182 COG4188 Predicted dienelactone 97.4 0.00058 1.3E-08 74.7 9.5 127 406-535 41-182 (365)
183 PF05728 UPF0227: Uncharacteri 97.4 0.0052 1.1E-07 62.5 15.8 49 495-550 44-92 (187)
184 COG2382 Fes Enterochelin ester 97.4 0.0014 3E-08 69.7 11.9 123 415-545 81-210 (299)
185 KOG0291|consensus 97.4 0.018 3.9E-07 67.2 20.9 186 157-356 308-494 (893)
186 PRK07868 acyl-CoA synthetase; 97.4 0.0055 1.2E-07 79.5 19.2 70 641-722 293-364 (994)
187 COG3571 Predicted hydrolase of 97.3 0.012 2.6E-07 56.0 15.1 93 433-532 15-109 (213)
188 PF02897 Peptidase_S9_N: Proly 97.3 0.062 1.4E-06 62.7 25.2 209 110-332 176-408 (414)
189 PF07859 Abhydrolase_3: alpha/ 97.3 0.0001 2.3E-09 77.2 1.7 56 797-867 154-209 (211)
190 cd00200 WD40 WD40 domain, foun 97.2 0.043 9.3E-07 58.8 22.0 195 157-373 10-206 (289)
191 TIGR03230 lipo_lipase lipoprot 97.2 0.0019 4.2E-08 74.0 11.5 112 430-545 39-152 (442)
192 KOG2314|consensus 97.2 0.029 6.4E-07 63.3 20.0 200 158-362 348-559 (698)
193 KOG0318|consensus 97.2 0.062 1.3E-06 60.5 22.1 93 113-223 28-124 (603)
194 KOG4497|consensus 97.2 0.001 2.2E-08 70.0 7.9 194 161-373 13-209 (447)
195 KOG1553|consensus 97.2 0.0019 4.2E-08 68.6 9.6 129 404-545 215-343 (517)
196 PRK11028 6-phosphogluconolacto 97.1 0.24 5.3E-06 55.7 27.3 244 110-373 41-305 (330)
197 PTZ00420 coronin; Provisional 97.1 0.42 9.1E-06 57.2 29.7 200 156-373 74-292 (568)
198 COG0400 Predicted esterase [Ge 97.1 0.0018 3.9E-08 66.8 8.6 50 813-870 144-193 (207)
199 COG0412 Dienelactone hydrolase 97.1 0.0038 8.1E-08 66.4 11.3 51 813-870 156-206 (236)
200 PF10340 DUF2424: Protein of u 97.1 0.019 4E-07 64.1 16.9 115 418-545 108-233 (374)
201 PF07433 DUF1513: Protein of u 97.1 0.3 6.5E-06 53.0 25.4 101 112-220 13-116 (305)
202 KOG2139|consensus 97.1 0.0095 2.1E-07 63.8 13.7 115 155-280 194-311 (445)
203 cd00200 WD40 WD40 domain, foun 97.1 0.2 4.4E-06 53.5 25.1 228 112-373 18-248 (289)
204 KOG0266|consensus 97.0 0.068 1.5E-06 63.0 22.3 224 111-359 211-441 (456)
205 PF11339 DUF3141: Protein of u 97.0 0.025 5.4E-07 64.4 17.2 57 640-697 292-348 (581)
206 KOG0291|consensus 97.0 0.067 1.4E-06 62.7 20.7 196 155-373 349-549 (893)
207 PF02129 Peptidase_S15: X-Pro 97.0 0.00025 5.5E-09 77.5 1.4 155 683-866 56-271 (272)
208 COG3545 Predicted esterase of 97.0 0.027 5.9E-07 55.2 14.8 121 487-698 37-157 (181)
209 PF02239 Cytochrom_D1: Cytochr 97.0 0.2 4.4E-06 57.1 24.4 249 112-373 86-346 (369)
210 PF07676 PD40: WD40-like Beta 96.9 0.0016 3.5E-08 47.7 4.9 30 158-187 10-39 (39)
211 PF06342 DUF1057: Alpha/beta h 96.9 0.024 5.1E-07 60.0 15.0 127 406-545 9-135 (297)
212 PLN02298 hydrolase, alpha/beta 96.9 0.0032 6.9E-08 71.0 9.6 47 813-868 249-295 (330)
213 PTZ00420 coronin; Provisional 96.9 0.2 4.3E-06 59.9 24.1 64 156-223 125-188 (568)
214 PF05677 DUF818: Chlamydia CHL 96.9 0.01 2.2E-07 64.2 12.0 121 402-533 111-236 (365)
215 KOG2314|consensus 96.8 0.15 3.3E-06 57.8 21.1 236 111-373 218-479 (698)
216 PLN02385 hydrolase; alpha/beta 96.8 0.0058 1.2E-07 69.5 10.8 47 813-868 277-323 (349)
217 PTZ00421 coronin; Provisional 96.8 0.29 6.3E-06 57.9 24.9 167 156-332 125-294 (493)
218 TIGR03611 RutD pyrimidine util 96.7 0.0023 5E-08 68.6 6.4 46 813-869 196-241 (257)
219 PF10282 Lactonase: Lactonase, 96.7 1.5 3.2E-05 49.7 30.2 241 159-417 39-307 (345)
220 KOG2624|consensus 96.7 0.0079 1.7E-07 68.2 10.7 141 398-545 43-197 (403)
221 KOG1516|consensus 96.7 0.0027 5.9E-08 77.0 7.6 130 410-545 93-230 (545)
222 KOG0318|consensus 96.7 0.13 2.9E-06 57.9 19.4 61 158-223 192-256 (603)
223 PF00561 Abhydrolase_1: alpha/ 96.7 0.0041 8.9E-08 65.5 7.7 77 463-545 1-77 (230)
224 TIGR02171 Fb_sc_TIGR02171 Fibr 96.7 0.075 1.6E-06 64.8 18.6 95 116-223 319-420 (912)
225 COG1647 Esterase/lipase [Gener 96.7 0.0014 3E-08 66.2 3.5 57 802-874 175-231 (243)
226 TIGR01839 PHA_synth_II poly(R) 96.7 0.2 4.4E-06 58.9 21.7 80 453-545 238-326 (560)
227 PF02239 Cytochrom_D1: Cytochr 96.6 0.54 1.2E-05 53.6 24.6 195 118-334 7-208 (369)
228 PTZ00421 coronin; Provisional 96.6 1.1 2.3E-05 53.2 27.6 202 156-373 75-289 (493)
229 KOG1407|consensus 96.6 0.079 1.7E-06 54.7 15.3 210 113-357 30-248 (313)
230 PHA02857 monoglyceride lipase; 96.6 0.0057 1.2E-07 66.9 7.9 47 813-869 207-253 (276)
231 PF10647 Gmad1: Lipoprotein Lp 96.5 0.16 3.5E-06 54.6 18.6 165 157-327 24-196 (253)
232 TIGR03343 biphenyl_bphD 2-hydr 96.5 0.0044 9.5E-08 68.0 6.2 45 813-868 221-265 (282)
233 PRK11028 6-phosphogluconolacto 96.4 0.48 1E-05 53.3 22.3 59 159-221 128-193 (330)
234 KOG2048|consensus 96.4 0.2 4.4E-06 58.2 18.7 67 301-374 481-548 (691)
235 KOG2055|consensus 96.4 0.079 1.7E-06 58.8 14.7 190 157-373 258-466 (514)
236 COG2706 3-carboxymuconate cycl 96.3 0.96 2.1E-05 49.3 22.4 198 170-373 3-222 (346)
237 KOG0266|consensus 96.3 0.21 4.5E-06 59.0 19.5 197 157-373 160-363 (456)
238 TIGR03502 lipase_Pla1_cef extr 96.3 0.018 3.9E-07 70.5 10.5 101 430-533 447-576 (792)
239 COG4099 Predicted peptidase [G 96.3 0.0089 1.9E-07 62.7 6.6 104 709-861 249-354 (387)
240 KOG0305|consensus 96.2 0.76 1.7E-05 53.2 22.4 207 131-371 198-418 (484)
241 COG2706 3-carboxymuconate cycl 96.2 2.5 5.4E-05 46.2 27.6 253 103-381 39-325 (346)
242 COG3386 Gluconolactonase [Carb 96.2 0.32 7E-06 53.6 18.7 65 157-221 111-181 (307)
243 PF10503 Esterase_phd: Esteras 96.2 0.012 2.7E-07 61.3 7.2 29 816-844 170-198 (220)
244 KOG4389|consensus 96.0 0.0057 1.2E-07 68.4 4.2 112 433-545 136-253 (601)
245 PF09752 DUF2048: Uncharacteri 96.0 0.15 3.3E-06 56.0 15.0 119 417-540 78-203 (348)
246 PF06433 Me-amine-dh_H: Methyl 96.0 3.2 7E-05 45.8 25.5 242 111-373 43-319 (342)
247 PF02230 Abhydrolase_2: Phosph 96.0 0.0056 1.2E-07 64.4 3.6 48 815-869 155-202 (216)
248 PF12146 Hydrolase_4: Putative 96.0 0.027 5.8E-07 48.5 7.2 58 413-477 1-58 (79)
249 PF05448 AXE1: Acetyl xylan es 96.0 0.0011 2.5E-08 73.5 -1.7 62 792-870 246-307 (320)
250 KOG0772|consensus 96.0 0.18 3.8E-06 56.8 15.0 196 155-361 267-478 (641)
251 KOG0973|consensus 96.0 0.29 6.3E-06 60.0 18.2 22 156-177 69-90 (942)
252 KOG2055|consensus 95.9 0.2 4.3E-06 55.8 15.1 60 158-222 305-364 (514)
253 PRK10439 enterobactin/ferric e 95.9 0.028 6.1E-07 64.9 9.4 42 817-867 351-392 (411)
254 KOG1273|consensus 95.9 0.28 6.1E-06 52.0 15.4 183 159-361 26-217 (405)
255 PF02273 Acyl_transf_2: Acyl t 95.9 0.2 4.4E-06 51.6 14.0 123 410-545 9-132 (294)
256 KOG0275|consensus 95.9 0.35 7.6E-06 51.1 16.0 57 309-373 407-466 (508)
257 PF03959 FSH1: Serine hydrolas 95.9 0.021 4.5E-07 59.8 7.3 46 643-700 159-204 (212)
258 TIGR02427 protocat_pcaD 3-oxoa 95.8 0.033 7.1E-07 59.0 8.6 45 813-868 191-235 (251)
259 TIGR03056 bchO_mg_che_rel puta 95.7 0.029 6.2E-07 61.1 8.3 45 813-868 218-262 (278)
260 COG1073 Hydrolases of the alph 95.7 0.14 3E-06 56.2 13.7 79 626-720 218-298 (299)
261 KOG1407|consensus 95.7 1.4 3E-05 45.9 19.1 178 160-362 110-294 (313)
262 KOG4497|consensus 95.7 0.05 1.1E-06 57.7 9.1 105 155-266 90-198 (447)
263 PF11144 DUF2920: Protein of u 95.7 0.11 2.4E-06 58.2 12.2 53 493-545 163-217 (403)
264 KOG0315|consensus 95.6 0.73 1.6E-05 47.5 16.5 187 158-373 42-244 (311)
265 KOG0272|consensus 95.6 0.45 9.8E-06 52.5 15.9 206 129-359 198-406 (459)
266 COG3208 GrsT Predicted thioest 95.5 0.14 3E-06 53.2 11.6 60 643-720 174-233 (244)
267 PF05577 Peptidase_S28: Serine 95.5 0.058 1.3E-06 63.3 10.0 112 432-545 29-146 (434)
268 PF10142 PhoPQ_related: PhoPQ- 95.3 1.3 2.8E-05 49.9 19.2 81 620-722 243-323 (367)
269 KOG1446|consensus 95.3 1.3 2.9E-05 47.2 17.9 171 156-352 100-287 (311)
270 KOG0973|consensus 95.3 0.6 1.3E-05 57.4 17.4 101 111-223 77-192 (942)
271 KOG1445|consensus 95.1 0.17 3.8E-06 58.0 11.5 92 128-224 650-742 (1012)
272 KOG1838|consensus 95.1 0.23 4.9E-06 55.9 12.3 187 644-865 123-362 (409)
273 COG0596 MhpC Predicted hydrola 95.1 0.084 1.8E-06 55.8 9.0 101 432-545 21-121 (282)
274 KOG3253|consensus 95.1 0.39 8.4E-06 55.5 14.1 46 644-700 303-348 (784)
275 KOG0645|consensus 95.0 5.6 0.00012 41.8 21.4 193 157-373 15-228 (312)
276 TIGR02171 Fb_sc_TIGR02171 Fibr 94.9 0.1 2.3E-06 63.6 9.8 49 169-221 319-369 (912)
277 PF07676 PD40: WD40-like Beta 94.8 0.03 6.4E-07 40.9 3.1 26 199-224 5-30 (39)
278 KOG0272|consensus 94.7 0.4 8.7E-06 52.9 12.5 184 156-356 261-446 (459)
279 COG5354 Uncharacterized protei 94.6 6.4 0.00014 44.9 21.8 231 108-373 37-305 (561)
280 KOG2096|consensus 94.6 1.1 2.5E-05 47.7 15.1 37 320-356 352-389 (420)
281 PF06057 VirJ: Bacterial virul 94.6 0.24 5.2E-06 49.8 9.8 80 449-539 16-95 (192)
282 KOG0271|consensus 94.5 0.19 4.1E-06 54.5 9.5 62 157-223 368-430 (480)
283 KOG0273|consensus 94.4 5.5 0.00012 44.9 20.4 62 157-223 236-297 (524)
284 PRK10749 lysophospholipase L2; 94.2 0.042 9E-07 62.0 4.0 53 813-869 257-309 (330)
285 PLN02578 hydrolase 94.2 0.16 3.5E-06 57.8 8.8 44 813-868 294-337 (354)
286 PRK04940 hypothetical protein; 94.1 2.3 4.9E-05 42.8 15.5 52 649-717 127-178 (180)
287 TIGR01250 pro_imino_pep_2 prol 94.1 0.11 2.3E-06 56.5 7.0 44 813-868 229-272 (288)
288 KOG0284|consensus 94.1 0.56 1.2E-05 51.5 11.9 187 156-373 96-293 (464)
289 PRK10673 acyl-CoA esterase; Pr 94.1 0.16 3.5E-06 54.5 8.2 45 813-868 193-237 (255)
290 PF03583 LIP: Secretory lipase 94.0 0.071 1.5E-06 58.6 5.4 49 813-868 217-266 (290)
291 PRK14875 acetoin dehydrogenase 94.0 0.072 1.6E-06 61.0 5.6 42 813-868 312-353 (371)
292 PF12695 Abhydrolase_5: Alpha/ 94.0 0.043 9.3E-07 53.1 3.2 43 814-866 103-145 (145)
293 COG3490 Uncharacterized protei 94.0 8.6 0.00019 40.9 19.7 66 155-220 112-179 (366)
294 PF06977 SdiA-regulated: SdiA- 93.9 10 0.00022 40.4 21.3 197 158-371 23-247 (248)
295 PF04762 IKI3: IKI3 family; I 93.9 19 0.00042 46.2 27.3 105 113-223 31-141 (928)
296 PTZ00472 serine carboxypeptida 93.9 0.21 4.5E-06 58.8 9.1 114 413-532 60-191 (462)
297 COG2021 MET2 Homoserine acetyl 93.8 0.36 7.8E-06 53.3 10.1 82 462-545 92-180 (368)
298 KOG2096|consensus 93.8 1.6 3.5E-05 46.6 14.2 71 146-222 77-152 (420)
299 TIGR00976 /NonD putative hydro 93.8 0.14 3.1E-06 62.0 7.8 43 813-866 230-272 (550)
300 PF00151 Lipase: Lipase; Inte 93.7 0.077 1.7E-06 59.3 4.9 112 429-545 68-185 (331)
301 PLN00021 chlorophyllase 93.6 0.46 9.9E-06 52.8 10.8 44 814-867 188-241 (313)
302 PRK11071 esterase YqiA; Provis 93.6 0.2 4.3E-06 51.4 7.3 43 814-870 135-177 (190)
303 KOG2394|consensus 93.6 0.074 1.6E-06 60.1 4.3 59 158-221 292-351 (636)
304 KOG1274|consensus 93.5 1.7 3.6E-05 52.8 15.5 106 156-281 138-263 (933)
305 PF10647 Gmad1: Lipoprotein Lp 93.4 1.3 2.8E-05 47.8 13.5 61 158-221 113-183 (253)
306 PF08386 Abhydrolase_4: TAP-li 93.3 0.11 2.3E-06 47.4 4.3 43 815-868 34-76 (103)
307 PLN02894 hydrolase, alpha/beta 93.3 0.16 3.4E-06 58.9 6.8 45 813-868 323-367 (402)
308 KOG0263|consensus 93.2 0.88 1.9E-05 54.1 12.5 89 118-220 506-595 (707)
309 COG4947 Uncharacterized protei 93.0 0.1 2.3E-06 50.4 3.8 49 500-553 91-139 (227)
310 PF08840 BAAT_C: BAAT / Acyl-C 93.0 0.07 1.5E-06 55.9 3.0 53 813-870 113-166 (213)
311 COG2382 Fes Enterochelin ester 92.9 0.29 6.4E-06 52.5 7.5 46 813-868 237-282 (299)
312 KOG0263|consensus 92.9 4 8.6E-05 48.8 17.2 187 158-373 453-648 (707)
313 TIGR03695 menH_SHCHC 2-succiny 92.9 0.24 5.2E-06 52.2 7.0 44 813-868 192-235 (251)
314 KOG1455|consensus 92.9 0.35 7.7E-06 51.8 7.9 47 813-868 244-290 (313)
315 KOG0772|consensus 92.7 1.9 4.2E-05 48.8 13.6 206 155-374 166-394 (641)
316 KOG4391|consensus 92.7 0.76 1.6E-05 46.5 9.4 45 813-866 219-263 (300)
317 KOG0296|consensus 92.7 13 0.00029 40.7 19.2 162 156-337 64-229 (399)
318 PLN00181 protein SPA1-RELATED; 92.7 14 0.0003 47.1 23.6 195 158-373 534-737 (793)
319 KOG0650|consensus 92.6 3 6.6E-05 48.2 15.1 191 156-359 400-626 (733)
320 KOG1524|consensus 92.6 3.9 8.5E-05 46.7 15.7 91 125-222 70-165 (737)
321 KOG1446|consensus 92.5 18 0.00039 39.0 24.3 195 157-373 15-216 (311)
322 KOG2139|consensus 92.4 0.49 1.1E-05 51.2 8.2 96 111-222 246-365 (445)
323 KOG1063|consensus 92.4 7.1 0.00015 46.2 17.9 68 156-223 525-593 (764)
324 PF06500 DUF1100: Alpha/beta h 92.3 0.036 7.9E-07 62.5 -0.2 171 643-838 187-375 (411)
325 PLN02652 hydrolase; alpha/beta 92.2 0.11 2.3E-06 59.9 3.4 48 813-869 322-369 (395)
326 PF10230 DUF2305: Uncharacteri 92.2 0.85 1.8E-05 49.5 10.2 109 432-545 2-120 (266)
327 TIGR01849 PHB_depoly_PhaZ poly 92.1 3.1 6.8E-05 47.6 14.9 69 641-718 333-405 (406)
328 PF00450 Peptidase_S10: Serine 91.7 0.51 1.1E-05 55.0 8.5 116 411-530 21-154 (415)
329 KOG2382|consensus 91.7 1.1 2.3E-05 48.9 10.0 101 430-539 50-151 (315)
330 KOG1274|consensus 91.7 16 0.00034 44.8 20.2 193 130-359 76-289 (933)
331 KOG2183|consensus 91.4 0.92 2E-05 50.4 9.0 90 456-545 105-200 (492)
332 KOG2315|consensus 91.3 29 0.00062 40.4 20.9 193 158-361 167-375 (566)
333 KOG1538|consensus 91.3 16 0.00035 43.0 19.0 59 157-221 13-72 (1081)
334 KOG0286|consensus 91.1 24 0.00052 37.7 22.2 159 183-363 166-336 (343)
335 KOG3043|consensus 90.7 0.24 5.1E-06 50.6 3.6 51 813-869 162-212 (242)
336 PF08386 Abhydrolase_4: TAP-li 90.7 0.4 8.6E-06 43.7 4.8 43 647-700 35-77 (103)
337 COG3458 Acetyl esterase (deace 90.2 0.68 1.5E-05 48.7 6.4 46 813-868 257-302 (321)
338 KOG1539|consensus 90.0 0.8 1.7E-05 54.7 7.6 60 158-222 578-637 (910)
339 KOG2110|consensus 89.9 3.4 7.4E-05 45.2 11.6 64 155-222 172-238 (391)
340 PF07519 Tannase: Tannase and 89.9 0.64 1.4E-05 54.8 6.8 72 648-719 355-427 (474)
341 KOG0299|consensus 89.8 38 0.00082 38.4 19.7 49 158-211 204-253 (479)
342 TIGR01738 bioH putative pimelo 89.7 0.29 6.2E-06 51.5 3.6 45 813-868 186-230 (245)
343 KOG2551|consensus 89.7 4 8.7E-05 41.9 11.3 61 643-720 161-221 (230)
344 KOG0315|consensus 89.6 29 0.00063 36.3 19.7 183 157-362 84-279 (311)
345 KOG0306|consensus 89.6 10 0.00023 45.3 16.0 174 156-355 454-649 (888)
346 KOG0275|consensus 89.5 1.2 2.7E-05 47.2 7.7 63 157-224 307-370 (508)
347 PF07819 PGAP1: PGAP1-like pro 89.4 2.2 4.7E-05 45.1 9.9 37 508-544 81-120 (225)
348 COG5354 Uncharacterized protei 89.3 30 0.00064 39.8 18.6 197 157-363 174-382 (561)
349 PLN02679 hydrolase, alpha/beta 89.2 0.46 1E-05 54.2 4.9 49 813-868 290-339 (360)
350 KOG0643|consensus 89.0 8.6 0.00019 40.4 13.2 66 158-223 95-168 (327)
351 PRK02888 nitrous-oxide reducta 88.9 24 0.00053 42.3 18.6 193 112-329 138-352 (635)
352 KOG0771|consensus 88.5 11 0.00023 42.2 14.3 59 160-223 148-207 (398)
353 PLN02511 hydrolase 88.5 0.55 1.2E-05 54.1 5.0 56 795-867 285-340 (388)
354 KOG0286|consensus 88.5 39 0.00084 36.2 19.8 187 157-374 56-259 (343)
355 COG3386 Gluconolactonase [Carb 88.3 10 0.00022 41.9 14.4 51 320-374 143-193 (307)
356 PLN02733 phosphatidylcholine-s 88.2 0.88 1.9E-05 52.8 6.3 83 454-545 113-199 (440)
357 KOG2182|consensus 88.1 2.8 6E-05 48.1 9.9 115 431-545 85-205 (514)
358 COG2945 Predicted hydrolase of 87.8 1.1 2.5E-05 44.7 5.9 42 816-869 150-191 (210)
359 PRK00175 metX homoserine O-ace 87.7 0.53 1.2E-05 54.1 4.2 49 813-868 307-356 (379)
360 PRK10349 carboxylesterase BioH 87.7 0.37 7.9E-06 51.9 2.7 46 813-869 194-239 (256)
361 COG3243 PhaC Poly(3-hydroxyalk 87.6 6.2 0.00013 44.6 12.0 83 453-543 130-213 (445)
362 PF07519 Tannase: Tannase and 87.5 2.9 6.2E-05 49.4 10.1 126 415-545 16-148 (474)
363 TIGR01249 pro_imino_pep_1 prol 87.4 0.49 1.1E-05 52.6 3.6 47 813-870 245-292 (306)
364 KOG2112|consensus 87.3 0.64 1.4E-05 47.2 3.9 48 815-869 144-191 (206)
365 KOG3253|consensus 87.3 6.4 0.00014 46.0 12.1 48 814-871 303-350 (784)
366 KOG0282|consensus 87.2 7.5 0.00016 44.0 12.3 182 155-356 213-401 (503)
367 TIGR01607 PST-A Plasmodium sub 87.1 0.6 1.3E-05 52.6 4.1 47 815-870 270-316 (332)
368 PLN02211 methyl indole-3-aceta 87.0 3 6.6E-05 45.4 9.5 43 813-867 208-251 (273)
369 KOG0273|consensus 87.0 1.8 3.9E-05 48.6 7.4 64 155-223 451-514 (524)
370 COG1073 Hydrolases of the alph 86.8 0.56 1.2E-05 51.3 3.7 59 795-869 218-277 (299)
371 PLN03087 BODYGUARD 1 domain co 86.7 0.42 9E-06 56.2 2.6 44 813-867 416-459 (481)
372 COG3391 Uncharacterized conser 86.7 66 0.0014 36.9 21.0 203 158-373 75-282 (381)
373 PF12740 Chlorophyllase2: Chlo 86.6 10 0.00022 40.6 12.5 41 816-866 155-205 (259)
374 PRK06765 homoserine O-acetyltr 86.4 0.72 1.6E-05 53.0 4.3 49 813-868 321-370 (389)
375 KOG1282|consensus 86.4 1.9 4.1E-05 49.9 7.6 117 410-530 53-186 (454)
376 KOG1273|consensus 86.2 54 0.0012 35.5 19.1 60 156-220 65-124 (405)
377 KOG0282|consensus 85.7 37 0.0008 38.8 16.7 60 157-221 259-318 (503)
378 KOG2106|consensus 85.6 11 0.00025 42.9 12.6 58 160-223 411-468 (626)
379 PF04762 IKI3: IKI3 family; I 85.5 44 0.00095 43.1 19.8 53 308-361 269-325 (928)
380 PF01674 Lipase_2: Lipase (cla 85.0 3.1 6.7E-05 43.5 7.8 89 435-532 4-95 (219)
381 KOG3967|consensus 85.0 11 0.00023 38.3 10.9 70 460-535 142-213 (297)
382 KOG2315|consensus 84.8 21 0.00046 41.4 14.5 96 158-266 272-374 (566)
383 PLN03016 sinapoylglucose-malat 84.7 2.6 5.5E-05 49.1 7.7 115 412-531 48-184 (433)
384 TIGR03100 hydr1_PEP hydrolase, 84.5 3 6.4E-05 45.5 7.8 47 813-869 205-257 (274)
385 PF11187 DUF2974: Protein of u 84.4 2.2 4.8E-05 44.8 6.5 50 496-545 68-121 (224)
386 COG2267 PldB Lysophospholipase 84.3 0.78 1.7E-05 50.7 3.2 53 812-873 225-278 (298)
387 KOG2919|consensus 84.3 14 0.00029 40.0 11.9 114 158-282 160-283 (406)
388 KOG1515|consensus 84.2 1 2.2E-05 50.3 4.0 51 809-868 262-312 (336)
389 PLN02965 Probable pheophorbida 84.0 0.8 1.7E-05 49.3 3.1 45 813-868 191-235 (255)
390 KOG4388|consensus 83.8 1.9 4.1E-05 49.7 5.9 89 431-530 395-487 (880)
391 COG3150 Predicted esterase [Ge 83.6 20 0.00042 35.3 11.7 37 495-533 44-80 (191)
392 KOG0639|consensus 83.3 8.9 0.00019 43.6 10.6 170 158-355 467-648 (705)
393 KOG4499|consensus 83.0 27 0.00059 36.2 12.9 63 157-221 109-176 (310)
394 PRK07581 hypothetical protein; 82.8 0.89 1.9E-05 51.3 3.0 44 813-867 273-317 (339)
395 PF06028 DUF915: Alpha/beta hy 82.6 15 0.00032 39.4 11.9 37 495-533 88-124 (255)
396 PF12697 Abhydrolase_6: Alpha/ 82.6 1.7 3.7E-05 44.7 4.8 44 813-867 174-217 (228)
397 PRK00870 haloalkane dehalogena 82.6 1.1 2.3E-05 49.7 3.5 47 813-868 237-283 (302)
398 KOG2984|consensus 82.3 1.1 2.5E-05 44.8 3.0 45 813-868 214-258 (277)
399 PRK06489 hypothetical protein; 82.3 1.1 2.4E-05 51.1 3.5 45 813-868 290-340 (360)
400 PLN02209 serine carboxypeptida 82.2 3.6 7.9E-05 47.9 7.7 115 411-530 49-185 (437)
401 PF05990 DUF900: Alpha/beta hy 82.1 3.9 8.5E-05 43.4 7.3 96 430-532 16-113 (233)
402 KOG0303|consensus 82.1 25 0.00055 39.0 13.2 65 155-223 130-194 (472)
403 KOG2919|consensus 82.0 22 0.00048 38.5 12.4 48 324-374 234-281 (406)
404 TIGR01392 homoserO_Ac_trn homo 81.9 1.4 3E-05 50.1 4.0 49 813-868 286-335 (351)
405 KOG0288|consensus 81.7 1.8 3.9E-05 47.8 4.5 58 159-221 390-450 (459)
406 PRK03592 haloalkane dehalogena 81.5 1.4 3.1E-05 48.5 3.9 46 813-868 226-271 (295)
407 PRK13613 lipoprotein LpqB; Pro 81.5 74 0.0016 38.8 18.5 161 158-331 364-541 (599)
408 COG0429 Predicted hydrolase of 81.4 1.5 3.2E-05 47.9 3.7 58 792-866 258-315 (345)
409 KOG0265|consensus 81.3 64 0.0014 34.8 15.3 63 155-222 46-110 (338)
410 PRK13614 lipoprotein LpqB; Pro 81.0 58 0.0013 39.3 17.2 162 158-331 344-521 (573)
411 KOG0296|consensus 81.0 96 0.0021 34.4 18.9 139 125-283 83-223 (399)
412 PRK10985 putative hydrolase; P 80.8 1.9 4.1E-05 48.4 4.7 56 793-866 240-295 (324)
413 PLN02919 haloacid dehalogenase 80.8 2E+02 0.0043 37.9 23.8 58 160-221 686-758 (1057)
414 PF00756 Esterase: Putative es 80.6 0.046 9.9E-07 58.9 -8.3 44 815-866 183-236 (251)
415 KOG2110|consensus 80.4 85 0.0019 34.8 16.4 62 308-372 185-248 (391)
416 KOG1445|consensus 80.3 9.8 0.00021 44.4 9.8 63 156-223 720-785 (1012)
417 KOG0302|consensus 80.2 23 0.0005 39.1 12.1 114 155-279 256-377 (440)
418 KOG0645|consensus 80.2 87 0.0019 33.4 20.1 64 155-223 60-126 (312)
419 KOG0310|consensus 80.2 50 0.0011 37.8 15.0 159 158-332 70-229 (487)
420 PF07082 DUF1350: Protein of u 80.2 16 0.00035 38.5 10.7 90 434-532 18-110 (250)
421 KOG4840|consensus 79.9 4.5 9.8E-05 41.3 6.3 90 450-552 54-146 (299)
422 KOG3101|consensus 79.7 34 0.00074 35.0 12.1 45 816-866 216-261 (283)
423 PF00975 Thioesterase: Thioest 79.5 6.1 0.00013 41.5 7.8 83 434-532 2-86 (229)
424 KOG1009|consensus 79.4 22 0.00049 39.6 11.8 61 158-223 125-186 (434)
425 PLN02824 hydrolase, alpha/beta 79.1 1.2 2.6E-05 49.1 2.3 45 813-868 232-276 (294)
426 KOG0771|consensus 79.1 46 0.00099 37.4 14.1 53 156-214 186-241 (398)
427 PLN02919 haloacid dehalogenase 77.5 2.5E+02 0.0054 37.1 33.7 59 159-221 626-701 (1057)
428 KOG1920|consensus 77.3 1.3E+02 0.0028 38.8 18.6 62 157-223 69-130 (1265)
429 KOG0305|consensus 76.9 54 0.0012 38.4 14.7 149 157-327 302-460 (484)
430 KOG0643|consensus 76.6 1.1E+02 0.0024 32.6 19.2 149 113-283 20-180 (327)
431 KOG0279|consensus 76.4 1.1E+02 0.0025 32.7 20.7 199 155-374 14-222 (315)
432 cd00312 Esterase_lipase Estera 76.3 1.5 3.3E-05 52.4 2.2 87 643-738 92-186 (493)
433 PRK08775 homoserine O-acetyltr 76.2 1.5 3.2E-05 49.7 2.0 46 813-868 275-321 (343)
434 KOG4667|consensus 76.2 24 0.00052 36.2 10.1 49 814-873 198-246 (269)
435 TIGR02240 PHA_depoly_arom poly 76.2 1.9 4.1E-05 47.0 2.8 44 813-868 205-248 (276)
436 PF05787 DUF839: Bacterial pro 76.1 17 0.00036 43.5 10.8 109 112-221 358-520 (524)
437 TIGR01836 PHA_synth_III_C poly 76.1 2.1 4.5E-05 48.7 3.2 45 813-867 284-328 (350)
438 PF03088 Str_synth: Strictosid 75.9 16 0.00035 32.1 7.9 61 161-221 2-75 (89)
439 KOG0646|consensus 75.5 70 0.0015 36.5 14.4 61 158-223 83-144 (476)
440 PRK03204 haloalkane dehalogena 75.4 2.4 5.2E-05 46.5 3.4 43 815-868 227-270 (286)
441 KOG0319|consensus 75.0 1.1E+02 0.0024 37.0 16.5 182 160-373 23-221 (775)
442 KOG2321|consensus 74.8 81 0.0018 37.0 14.9 31 158-192 53-83 (703)
443 KOG0283|consensus 74.4 83 0.0018 38.4 15.6 58 309-373 516-575 (712)
444 KOG2394|consensus 73.7 16 0.00034 42.2 9.0 95 157-265 220-351 (636)
445 PF05728 UPF0227: Uncharacteri 73.5 3.2 6.9E-05 42.3 3.4 40 816-869 135-174 (187)
446 KOG0289|consensus 73.4 1.7E+02 0.0037 33.3 19.3 198 155-373 260-461 (506)
447 KOG0289|consensus 72.9 1.3E+02 0.0027 34.3 15.3 180 179-374 237-419 (506)
448 KOG2931|consensus 72.7 22 0.00047 38.4 9.2 137 408-556 27-166 (326)
449 PF06821 Ser_hydrolase: Serine 72.3 3.2 6.9E-05 41.7 3.0 39 816-866 115-153 (171)
450 KOG0303|consensus 71.6 1.7E+02 0.0037 32.9 15.8 60 155-220 172-233 (472)
451 PF07433 DUF1513: Protein of u 71.3 1.7E+02 0.0036 32.3 20.8 102 254-359 12-117 (305)
452 PF08450 SGL: SMP-30/Gluconola 69.7 1.6E+02 0.0034 31.2 28.9 192 161-373 4-212 (246)
453 KOG2111|consensus 69.6 18 0.00039 39.1 7.8 63 157-223 182-247 (346)
454 PF12048 DUF3530: Protein of u 69.4 45 0.00098 37.0 11.6 128 412-545 70-227 (310)
455 PLN02872 triacylglycerol lipas 69.0 4 8.7E-05 47.0 3.3 42 815-866 325-366 (395)
456 KOG1063|consensus 68.9 23 0.0005 42.2 9.1 102 112-223 534-638 (764)
457 PRK13615 lipoprotein LpqB; Pro 68.7 2.5E+02 0.0054 33.9 18.1 159 159-331 336-504 (557)
458 PF07224 Chlorophyllase: Chlor 68.4 45 0.00097 35.5 10.3 83 643-738 43-130 (307)
459 COG0627 Predicted esterase [Ge 68.2 4.6 9.9E-05 44.8 3.4 110 739-867 169-294 (316)
460 COG3509 LpqC Poly(3-hydroxybut 68.0 22 0.00048 38.4 8.2 50 820-869 213-278 (312)
461 PF10142 PhoPQ_related: PhoPQ- 67.8 12 0.00026 42.2 6.7 65 788-869 242-306 (367)
462 KOG2106|consensus 67.6 14 0.00031 42.2 6.9 59 157-218 448-507 (626)
463 KOG0278|consensus 67.4 1.7E+02 0.0037 30.9 15.2 145 157-327 144-298 (334)
464 PF00561 Abhydrolase_1: alpha/ 67.2 6 0.00013 41.1 4.0 44 643-698 173-216 (230)
465 PF04083 Abhydro_lipase: Parti 66.3 15 0.00034 29.9 5.2 47 399-445 8-56 (63)
466 PLN03084 alpha/beta hydrolase 66.2 6.2 0.00013 45.3 4.1 45 813-869 323-367 (383)
467 PRK13613 lipoprotein LpqB; Pro 64.9 62 0.0013 39.4 12.3 114 102-221 405-524 (599)
468 KOG3975|consensus 64.8 75 0.0016 33.5 10.9 102 428-532 25-130 (301)
469 KOG0270|consensus 64.7 2.6E+02 0.0056 32.0 16.6 122 162-294 249-373 (463)
470 KOG2565|consensus 64.7 30 0.00066 38.4 8.5 116 412-539 132-256 (469)
471 COG2939 Carboxypeptidase C (ca 64.2 18 0.00039 42.0 7.2 99 429-531 98-217 (498)
472 PF11288 DUF3089: Protein of u 64.1 7.5 0.00016 40.0 3.8 70 463-533 46-116 (207)
473 PLN00181 protein SPA1-RELATED; 64.0 4E+02 0.0087 33.9 27.6 62 157-223 576-639 (793)
474 PF01764 Lipase_3: Lipase (cla 63.8 13 0.00028 35.5 5.4 36 495-532 49-84 (140)
475 KOG0268|consensus 63.8 35 0.00077 37.5 8.7 59 158-222 189-247 (433)
476 KOG2041|consensus 63.1 50 0.0011 39.5 10.3 57 157-223 116-177 (1189)
477 PF03096 Ndr: Ndr family; Int 62.9 15 0.00032 39.7 5.9 109 430-545 21-132 (283)
478 PF05057 DUF676: Putative seri 62.9 13 0.00029 38.9 5.6 22 511-532 77-98 (217)
479 PRK13614 lipoprotein LpqB; Pro 62.6 68 0.0015 38.7 11.9 63 158-221 435-503 (573)
480 KOG0278|consensus 62.5 1.3E+02 0.0029 31.6 12.1 172 157-356 101-283 (334)
481 PF03959 FSH1: Serine hydrolas 62.0 6 0.00013 41.3 2.8 46 813-869 159-204 (212)
482 KOG1523|consensus 61.9 2.5E+02 0.0054 30.8 14.5 102 158-266 12-120 (361)
483 KOG1454|consensus 61.7 5.7 0.00012 44.5 2.6 45 813-868 261-306 (326)
484 KOG0639|consensus 60.3 73 0.0016 36.6 10.7 55 160-219 513-568 (705)
485 COG2936 Predicted acyl esteras 60.3 18 0.00038 43.0 6.3 39 797-844 241-279 (563)
486 KOG0283|consensus 59.8 88 0.0019 38.2 12.0 33 155-192 266-298 (712)
487 KOG1408|consensus 59.3 1.9E+02 0.0041 35.1 14.0 31 156-191 459-489 (1080)
488 KOG1524|consensus 58.8 1.6E+02 0.0034 34.4 13.0 26 336-361 251-277 (737)
489 COG3490 Uncharacterized protei 57.8 2.1E+02 0.0046 30.9 12.9 62 159-223 70-134 (366)
490 KOG0310|consensus 57.7 3.5E+02 0.0077 31.3 18.1 63 155-222 109-173 (487)
491 KOG0313|consensus 57.6 2.1E+02 0.0045 32.0 13.2 60 156-221 260-319 (423)
492 TIGR01838 PHA_synth_I poly(R)- 57.4 8.6 0.00019 45.9 3.3 45 813-868 413-457 (532)
493 KOG0302|consensus 56.4 1.3E+02 0.0028 33.5 11.5 57 161-221 216-276 (440)
494 KOG1920|consensus 56.1 5.8E+02 0.013 33.3 20.8 20 157-176 110-129 (1265)
495 KOG0277|consensus 56.0 2.8E+02 0.006 29.5 17.4 189 161-373 13-220 (311)
496 PRK13615 lipoprotein LpqB; Pro 55.4 1.3E+02 0.0029 36.1 12.7 108 106-221 373-487 (557)
497 KOG1009|consensus 55.0 49 0.0011 37.1 8.1 96 124-223 32-144 (434)
498 COG4782 Uncharacterized protei 54.4 30 0.00064 38.5 6.4 51 493-545 174-232 (377)
499 KOG0307|consensus 54.1 87 0.0019 39.7 10.9 198 158-373 8-239 (1049)
500 cd00741 Lipase Lipase. Lipase 53.6 19 0.00042 35.1 4.6 25 510-534 26-50 (153)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-88 Score=751.39 Aligned_cols=616 Identities=30% Similarity=0.534 Sum_probs=546.6
Q ss_pred CCCCCCccCcceeecccCccccCCCCCCCCCC--CHHHHHHHHHhhhchHhhhccC-CChHHHHHHHhhcccCCCCCCCe
Q psy1288 36 FEYPKARKNESLVDEYHGVKIPDPYGWMEDPD--SEETKKFVDEENAISRPYLEDH-PDRDKVKAELTKMWDYPKYSSPQ 112 (1012)
Q Consensus 36 ~~~P~a~~~~~~~~~~hG~~~~Dpy~WLed~~--~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~s~p~ 112 (1012)
+.||.|+|.|+. .+.||++++|+|+||+|.+ +|+|++||+|||+|++++|+++ +++++|++||+.+++.++.|+|.
T Consensus 4 p~pP~a~k~~~~-~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp~ 82 (682)
T COG1770 4 PLPPIAKKVPTT-RTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVPY 82 (682)
T ss_pred CCCCCcccccee-eeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCcc
Confidence 469999999965 8889999999999999998 9999999999999999999999 99999999999999999999999
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEeCCCCc-eEEEcCCCCCCCC-CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQDSLDGE-ARVFLDPNNLSDD-GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~~~~g~-~~~L~D~n~la~~-g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
++|.+.||.+.+.+.+++.-||+...++. +++|+|.|+++.+ .++.++.+.+|||++++||+.+..|++++.|.++|+
T Consensus 83 ~~~~~~Yy~r~~~g~~y~~~~R~~~~g~~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL 162 (682)
T COG1770 83 RKGPYEYYSRTEEGKEYPIYCRQPDEGGEGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDL 162 (682)
T ss_pred ccCCeeEEEEecCCCcceeEEeccCCCCCceeEeecchhccCcccceeeeeeeeCCCCceEEEEEecccccEEEEEEEec
Confidence 99999999999888777666664444554 8999999999988 688999999999999999999999999999999999
Q ss_pred CCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcc------c-CCCCCceEEEEeeccc-----------------
Q psy1288 191 ATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK------K-HSKKNRSSAYHLTVNV----------------- 246 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~------~-~~~~~~~l~~~~~~~~----------------- 246 (1012)
++|+..++.+.++. .+++|.+|+++|+|++.+...+-. . ......+++|++....
T Consensus 163 ~tg~~~~d~i~~~~-~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~ 241 (682)
T COG1770 163 ATGEELPDEITNTS-GSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVIS 241 (682)
T ss_pred ccccccchhhcccc-cceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEE
Confidence 99999888877653 779999999999999876532111 0 1112345556552000
Q ss_pred ----------------------------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCce
Q psy1288 247 ----------------------------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDV 298 (1012)
Q Consensus 247 ----------------------------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~ 298 (1012)
.+++|. ..+.|+.+|+.+|.++++++|++.++ .+..++|+.++++.++..
T Consensus 242 ~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~-~eh~~d~f~i~sN~~gknf~l~~ap~-~~~~~~w~~~I~h~~~~~ 319 (682)
T COG1770 242 LGSHITSEVRLLDADDPEAEPKVVLPRENGVEYS-VEHGGDRFYILSNADGKNFKLVRAPV-SADKSNWRELIPHREDVR 319 (682)
T ss_pred cCCCcceeEEEEecCCCCCceEEEEEcCCCcEEe-eeecCcEEEEEecCCCcceEEEEccC-CCChhcCeeeeccCCCce
Confidence 234454 67789999999999989999999998 666678999999999999
Q ss_pred eeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC--ceEEE-eecccccCcEEEEEecCCCCCcEEEEEeCCC
Q psy1288 299 LDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD--VGTIV-GFSGKKKYSEIFYSFMSFLQPTIIFHCNIPA 375 (1012)
Q Consensus 299 ~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~--~~~v~-~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~ 375 (1012)
++.+..++ ++|++..+.++.+++++.+..+|+.. .|.++ .++.. ..+..++.+.|+|.++|+++|.++|.+|+
T Consensus 320 l~~~~~f~-~~lVl~eR~~glp~v~v~~~~~~~~~-~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP~~~~~~dm-- 395 (682)
T COG1770 320 LEGVDLFA-DHLVLLERQEGLPRVVVRDRKTGEER-GIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTPATLFDYDM-- 395 (682)
T ss_pred eeeeeeec-cEEEEEecccCCceEEEEecCCCcee-eEEecchhhhccccCCCCCCCccEEEEeecccccceeEEeec--
Confidence 99999998 99999999999999999999777653 35555 22221 33445678999999999999999999999
Q ss_pred CCCCCCCcceEEEEeccCCC-CCCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhH
Q psy1288 376 RVDPNSKLETSIFREIKVPD-FDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTK 454 (1012)
Q Consensus 376 ~~~~~g~~~~~~l~~~~~~~-~~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~ 454 (1012)
.++ +.++|++.++++ ++++.|.++++++++.||.+||..++++++...+++.|+++++||+++.++.+.|+...
T Consensus 396 ---~t~--er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~ 470 (682)
T COG1770 396 ---ATG--ERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIAR 470 (682)
T ss_pred ---cCC--cEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccce
Confidence 577 788999988887 99999999999999999999999999999988899999999999999999999999888
Q ss_pred HHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCC
Q psy1288 455 IVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRP 534 (1012)
Q Consensus 455 ~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 534 (1012)
+++++ ||++++++++||||+.|+.|+++|+...+.++|.||++|+++|++++++++++|+++|+|+||+++++++++.|
T Consensus 471 lSLlD-RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P 549 (682)
T COG1770 471 LSLLD-RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAP 549 (682)
T ss_pred eeeec-CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhCh
Confidence 88887 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEEEEccCCCccccCcceeeeecccccccCcccccc-cCCCCcccccCCCCcchhhhhhhhhhhccccccccccccc
Q psy1288 535 DLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCD-LDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESD 613 (1012)
Q Consensus 535 ~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~d-l~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~ 613 (1012)
++|+++|+.+| |+| +++|.+ +++|||.. +| .|
T Consensus 550 ~lf~~iiA~VP-------------------------FVDvltTMlD----~slPLT~~-----------------E~-~E 582 (682)
T COG1770 550 DLFAGIIAQVP-------------------------FVDVLTTMLD----PSLPLTVT-----------------EW-DE 582 (682)
T ss_pred hhhhheeecCC-------------------------ccchhhhhcC----CCCCCCcc-----------------ch-hh
Confidence 99999999999 999 688876 79999985 34 79
Q ss_pred cCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCC
Q psy1288 614 YGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETK 693 (1012)
Q Consensus 614 ~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~ 693 (1012)
||+|.+++.++++++|||+.|+. .+.||++|++.|.+|+||.++++.+|.++|++. .+++.+++|++++.
T Consensus 583 WGNP~d~e~y~yikSYSPYdNV~------a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~----~td~~plLlkt~M~ 652 (682)
T COG1770 583 WGNPLDPEYYDYIKSYSPYDNVE------AQPYPAILVTTGLNDPRVQYWEPAKWVAKLREL----KTDGNPLLLKTNMD 652 (682)
T ss_pred hCCcCCHHHHHHHhhcCchhccc------cCCCCceEEEccccCCccccchHHHHHHHHhhc----ccCCCcEEEEeccc
Confidence 99999999999999999999999 689999999999999999999999999999998 56688999999999
Q ss_pred CCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 694 AGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 694 ~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
+|||...++.+.+++.+..++|+.+.++.
T Consensus 653 aGHgG~SgRf~~lee~A~eYaF~l~~~~~ 681 (682)
T COG1770 653 AGHGGASGRFQRLEEIAFEYAFLLKLAGT 681 (682)
T ss_pred ccCCCCCCchHHHHHHHHHHHHHhhhccC
Confidence 99999888888899999999999887643
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=5e-77 Score=719.52 Aligned_cols=611 Identities=24% Similarity=0.430 Sum_probs=501.5
Q ss_pred CCCCccCcceeecccCccccCCCCCCCCC--CCHHHHHHHHHhhhchHhhhccC-CChHHHHHHHhhcccCCCCCCCeee
Q psy1288 38 YPKARKNESLVDEYHGVKIPDPYGWMEDP--DSEETKKFVDEENAISRPYLEDH-PDRDKVKAELTKMWDYPKYSSPQRQ 114 (1012)
Q Consensus 38 ~P~a~~~~~~~~~~hG~~~~Dpy~WLed~--~~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~s~p~~d 114 (1012)
||.++|+|+ ++++||+++.|||+||||. ++|+|++||++||+||+++|++. +++++|+++|++++..++.++|.+.
T Consensus 2 pP~a~~~~~-~~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~ 80 (686)
T PRK10115 2 LPKAARIPH-AMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIK 80 (686)
T ss_pred cCCCCCCCe-eEEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEE
Confidence 788899885 4899999999999999996 59999999999999999999995 9999999999999999999999999
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCC-C---CceEEEcCCCCCCCC-CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE
Q psy1288 115 GDHYFFFHNTGLQNHSVMYIQDSL-D---GEARVFLDPNNLSDD-GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD 189 (1012)
Q Consensus 115 G~~~yy~~~~~~~~~~~l~~~~~~-~---g~~~~L~D~n~la~~-g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d 189 (1012)
|+++||.++..+. +..||++... + +.+++|+|+|+++++ +++.++.+.|||||++|||+.+.+|+++++|+++|
T Consensus 81 g~~~y~~~~~~g~-~~~~~~r~~~~~~~~~~~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d 159 (686)
T PRK10115 81 NGYRYRHIYEPGC-EYAIYQRQSAFSEEWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRN 159 (686)
T ss_pred CCEEEEEEEcCCC-ccEEEEEecCCCCCCCCCEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEE
Confidence 9999998886655 5777776543 2 457999999999755 67899999999999999999999999999999999
Q ss_pred CCCCceeceeecceeeeeeEEeeCCCeEEEEecCCC-C---------CcccCCCCCceEEEEee----------------
Q psy1288 190 VATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPK-S---------KSKKHSKKNRSSAYHLT---------------- 243 (1012)
Q Consensus 190 l~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~-~---------~g~~~~~~~~~l~~~~~---------------- 243 (1012)
+++|+.+++.+.+.. ..++|++||++|+|++.+.. . .|+ . .....+++.+.
T Consensus 160 ~~tg~~l~~~i~~~~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt-~-~~~d~lv~~e~~~~~~~~~~~s~d~~~ 236 (686)
T PRK10115 160 LETGNWYPELLDNVE-PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGT-P-ASQDELVYEEKDDTFYVSLHKTTSKHY 236 (686)
T ss_pred CCCCCCCCccccCcc-eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCC-C-hhHCeEEEeeCCCCEEEEEEEcCCCCE
Confidence 999987666666665 45999999999999976421 1 121 0 00112222210
Q ss_pred ------cc--------------c---------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccC
Q psy1288 244 ------VN--------------V---------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEEN 294 (1012)
Q Consensus 244 ------~~--------------~---------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~ 294 (1012)
.+ . .+..+. ..+.++.||+.+|.++++++|+.+++.+. .+|+.|+++.
T Consensus 237 l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ly~~tn~~~~~~~l~~~~~~~~--~~~~~l~~~~ 313 (686)
T PRK10115 237 VVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYS-LDHYQHRFYLRSNRHGKNFGLYRTRVRDE--QQWEELIPPR 313 (686)
T ss_pred EEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEE-EEeCCCEEEEEEcCCCCCceEEEecCCCc--ccCeEEECCC
Confidence 00 0 011132 33567899999999999999999998753 3599999987
Q ss_pred CCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecc--cccCcEEEEEecCCCCCcEEEEE
Q psy1288 295 KDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSG--KKKYSEIFYSFMSFLQPTIIFHC 371 (1012)
Q Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~--spdg~~l~~~~ss~~~p~~l~~~ 371 (1012)
++..++.+.+.. ++|++..+.++.++|+++++.++ ....++++ ...+..++. +++++.+++.++++.+|.++|.+
T Consensus 314 ~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~ 391 (686)
T PRK10115 314 ENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRKTR-EVIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFEL 391 (686)
T ss_pred CCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCCCC-ceEEecCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEE
Confidence 666777777775 89999999999999999998533 33455532 122223333 46778899999999999999999
Q ss_pred eCCCCCCCCCCcceEEEEeccCCCCCCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcC
Q psy1288 372 NIPARVDPNSKLETSIFREIKVPDFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS 451 (1012)
Q Consensus 372 d~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~ 451 (1012)
|+ .++ +.++++....+.+++..+.+++++++|.||.+|+++++++++...+++.|+||++|||++.+..+.|+
T Consensus 392 d~-----~~~--~~~~l~~~~~~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~ 464 (686)
T PRK10115 392 DM-----DTG--ERRVLKQTEVPGFDAANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFS 464 (686)
T ss_pred EC-----CCC--cEEEEEecCCCCcCccccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCcc
Confidence 99 355 56778876666688888899999999999999999888777654567789999999999999999999
Q ss_pred hhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHh
Q psy1288 452 VTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACIN 531 (1012)
Q Consensus 452 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 531 (1012)
...+.|++ +||+|+.+|+||++++|+.|++.+...++.++++|+++|++||+++++++++||+|+|+|+||+|++++++
T Consensus 465 ~~~~~l~~-rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~ 543 (686)
T PRK10115 465 FSRLSLLD-RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAIN 543 (686)
T ss_pred HHHHHHHH-CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHh
Confidence 98766665 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccc
Q psy1288 532 QRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWE 611 (1012)
Q Consensus 532 ~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~ 611 (1012)
++|++|+|+|+.+| +.|+. ..|.+ +++|++. .|.
T Consensus 544 ~~Pdlf~A~v~~vp---~~D~~---------------------~~~~~----~~~p~~~------------------~~~ 577 (686)
T PRK10115 544 QRPELFHGVIAQVP---FVDVV---------------------TTMLD----ESIPLTT------------------GEF 577 (686)
T ss_pred cChhheeEEEecCC---chhHh---------------------hhccc----CCCCCCh------------------hHH
Confidence 99999999999999 33321 11111 1223322 355
Q ss_pred cccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEe
Q psy1288 612 SDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIE 691 (1012)
Q Consensus 612 ~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~ 691 (1012)
.+||+|.+++.++++.++||+++++ +++||++|++||.+|+||+++++.+|+++|++. .....+++++++
T Consensus 578 ~e~G~p~~~~~~~~l~~~SP~~~v~------~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~----~~~~~~vl~~~~ 647 (686)
T PRK10115 578 EEWGNPQDPQYYEYMKSYSPYDNVT------AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLREL----KTDDHLLLLCTD 647 (686)
T ss_pred HHhCCCCCHHHHHHHHHcCchhccC------ccCCCceeEEecCCCCCcCchHHHHHHHHHHhc----CCCCceEEEEec
Confidence 7899999888899999999999998 689999999999999999999999999999998 222455888888
Q ss_pred CCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 692 TKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 692 p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
+++|||......+.+++.++.++|+..+++.
T Consensus 648 ~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~ 678 (686)
T PRK10115 648 MDSGHGGKSGRFKSYEGVAMEYAFLIALAQG 678 (686)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998777777789999999999998765
No 3
>KOG2237|consensus
Probab=100.00 E-value=6.3e-78 Score=663.86 Aligned_cols=626 Identities=42% Similarity=0.707 Sum_probs=510.8
Q ss_pred cCCCCCCccCcceeecccCccccCCCCCCCCCCCHHHHHHHHHhhhchHhhhccCCChHHHHHHHhhcccCCCCCCCeee
Q psy1288 35 KFEYPKARKNESLVDEYHGVKIPDPYGWMEDPDSEETKKFVDEENAISRPYLEDHPDRDKVKAELTKMWDYPKYSSPQRQ 114 (1012)
Q Consensus 35 ~~~~P~a~~~~~~~~~~hG~~~~Dpy~WLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~s~p~~d 114 (1012)
.+.||+++|+.++++.+||++|.|||+||||+++.++.+||++||.||+++|+++...++|..||+.+++++.+++|.+.
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d~~~~~~fv~~en~~t~~vl~~~e~~~kl~~em~~~i~ye~~~~p~r~ 82 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPDDTEMKEFVEAENKYTDAVLEDTETKEKLFSEMTKRIDYEIITPPLRW 82 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCcHHHHHHHHHHhhhhhHHHHhccHHHHHHHHHhhhccCccccCCcccc
Confidence 34799999999999999999999999999999999999999999999999999998777999999999999999999999
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCCCCceEEEc-------------CCCCCCCCC-ceEeeeEEECCCCcEEEEEEeCCCC
Q psy1288 115 GDHYFFFHNTGLQNHSVMYIQDSLDGEARVFL-------------DPNNLSDDG-TVSLGSYSFSEDGKTLAYCLSSSGS 180 (1012)
Q Consensus 115 G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~-------------D~n~la~~g-~~~i~~~~~SPDGk~iAy~~~~~G~ 180 (1012)
|+|+||.++.+++ +..+++++....++++++ |.|++++++ ++..+-...|||.++|||+....|+
T Consensus 83 G~~yyY~~n~~lk-q~vl~~rr~~~~e~~~~ld~~~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~ 161 (712)
T KOG2237|consen 83 GPWYYYFYNTGLK-QYVLYCRRLLEKEEEVFLDPNALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGK 161 (712)
T ss_pred CCEEEEEEcCCce-ehhHHHHhhhhcccceecCCccCCCCceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCC
Confidence 9999999999887 677777665544444444 444555442 3455555677888888888777777
Q ss_pred ceEEEEEEECCCCceeceeecceeeeeeEEee-CCCeEEEEecCCCC---------CcccCCCCCceEEEEeecc-----
Q psy1288 181 DWTSMHFKDVATGKEYPEVLHRLKFVSIAWTH-DHKGVFYSNQEPKS---------KSKKHSKKNRSSAYHLTVN----- 245 (1012)
Q Consensus 181 ~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSp-DG~~l~y~~~~~~~---------~g~~~~~~~~~l~~~~~~~----- 245 (1012)
+.+.+ |.++...+... +....+++..+|.. ||..|.|.+.+... .|+ ++ ..+.+++++..+
T Consensus 162 e~~~~-v~~~~~~~~~~-~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gt-dq-~~Dvl~~~e~d~~~~vf 237 (712)
T KOG2237|consen 162 ELFTV-VIDVKFSGPVW-THDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGT-DQ-SEDVLLYEEKDEPKHVF 237 (712)
T ss_pred cccee-eeeeccCCcee-eccCCceEeeeecccCCceeeeeeeccccCcceEEEEeccc-CC-CcceEEEecCCCCeEEE
Confidence 77777 77776666532 23334456778876 77777666543211 121 11 112233332100
Q ss_pred -----------------------c----------ccee----------------eeeeecCCCEEEEEECCCCCCceEEE
Q psy1288 246 -----------------------V----------APIT----------------SQYITNEGPQFVFKTNKDAPNYRLIT 276 (1012)
Q Consensus 246 -----------------------~----------~~i~----------------~~~~s~dg~~l~~~tn~~~~~~~L~~ 276 (1012)
. .++. +..+..++..++|++|.++++..+.+
T Consensus 238 ~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~~p~y~l~r 317 (712)
T KOG2237|consen 238 ISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPRVKGVDCFVEHYDFITNEGTEFYFLTNKDAPNYYLLR 317 (712)
T ss_pred EEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeeccchhhhhhhhhhheeccCcceeeeccCCCCceeEEe
Confidence 0 0000 23455567899999999999999999
Q ss_pred EeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEE
Q psy1288 277 IDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 277 ~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~ 356 (1012)
+++..++...|+.++.+.+..+++++...+++.+++.+..+....+.+.++.+|...+.+++|.+++..+....+.+.++
T Consensus 318 ~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l~g~~~~~fpLpv~sv~~~~g~~~~~~~~ 397 (712)
T KOG2237|consen 318 IDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLLDGSLLRSFPLPVGSVSGTSGDFKSSTIR 397 (712)
T ss_pred eeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccccCceeeeecCCCCcccccccCCCCceEE
Confidence 99988877789999999999999998888877888888887766665666667777788999988887777777789999
Q ss_pred EEecCCCCCcEEEEEeCCCCCCCCCCcceEEEEeccC--CCCCCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcE
Q psy1288 357 YSFMSFLQPTIIFHCNIPARVDPNSKLETSIFREIKV--PDFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPC 434 (1012)
Q Consensus 357 ~~~ss~~~p~~l~~~d~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~ 434 (1012)
|.++|+.+|+.+|.||+. .|..+..++.+... ++++.+.|+++++++.|.||+.||+++++.++.+.+++.|+
T Consensus 398 f~~sS~l~P~~iy~yDl~-----~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~ 472 (712)
T KOG2237|consen 398 FQFSSFLTPGSIYDYDLA-----NGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPL 472 (712)
T ss_pred EEEeccCCCCeEEEeecc-----CCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEechhhhcCCCce
Confidence 999999999999999994 55334556665544 78999999999999999999999999999888888899999
Q ss_pred EEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcE
Q psy1288 435 ILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRL 514 (1012)
Q Consensus 435 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i 514 (1012)
+|++|||++.++++.|..+.+.++. +|++++.+|+||||++|..|+..|+...++|.|+|+++|++||++++++.|+++
T Consensus 473 LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 473 LLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred EEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 9999999999999999988777777 799999999999999999999999999999999999999999999999999999
Q ss_pred EEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhh
Q psy1288 515 AIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHK 594 (1012)
Q Consensus 515 ~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~ 594 (1012)
++.|+|+||++++++++++|++|+|+|+.+|
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia~Vp------------------------------------------------- 582 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIAKVP------------------------------------------------- 582 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhhcCc-------------------------------------------------
Confidence 9999999999999999999999999999999
Q ss_pred hhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHh
Q psy1288 595 VLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQE 674 (1012)
Q Consensus 595 ~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~ 674 (1012)
.+|+++++.+++++.|..+|+...+++.++++..++|++++++|. +...||.+|+..+.+|+||.++++.+|.++|+.
T Consensus 583 fmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~pv~~i~--~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre 660 (712)
T KOG2237|consen 583 FMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSPVDNIK--KQVQYPSMLVTTADHDDRVGPLESLKWVAKLRE 660 (712)
T ss_pred ceehhhhhccCccccchhhhcccCChhhhhhhheecccCccCCCc--hhccCcceEEeeccCCCcccccchHHHHHHHHH
Confidence 566677777777777777666555555666666666655555431 233599999999999999999999999999999
Q ss_pred hhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 675 KLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 675 ~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
+...+..+..++++.+++++||+.++++.+++++.++.++||.+.+..
T Consensus 661 ~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 661 ATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred HhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 876655556889999999999999999999999999999999998764
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-70 Score=602.57 Aligned_cols=587 Identities=37% Similarity=0.609 Sum_probs=480.8
Q ss_pred ccCCCCCCCCCCCHHHHHHHHHhhhchHhhhccCCChHHHHHHHhhcccCCCCCCCeeeCCEEEEEEEcCCCCeeEEEEE
Q psy1288 56 IPDPYGWMEDPDSEETKKFVDEENAISRPYLEDHPDRDKVKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQ 135 (1012)
Q Consensus 56 ~~Dpy~WLed~~~~~~~~~l~~qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~s~p~~dG~~~yy~~~~~~~~~~~l~~~ 135 (1012)
..|||+||||.+++|+++|+++||+.|..+|...+.++.+.+++.+++.+++++.|+..|+++|..+++. ++...+|++
T Consensus 2 ~~DPy~wlEd~~~~eal~wv~~~N~~t~~~L~~~~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D~-~~p~Glwr~ 80 (648)
T COG1505 2 VPDPYRWLEDLDSAEALKWVEAQNAKTREFLGEDSARAASDKRLLELWDYEDIPIPFERGGRYYNFWQDA-LYPRGLYRR 80 (648)
T ss_pred CCCcchhhhcCCcHHHHHHHHhhhhHHHHHhhcchhhHHHHHHHHHHhhccccCcceeccceeEEeeccc-cCcceeEEe
Confidence 5799999999999999999999999999999999999999999999999999999999999999999875 466789988
Q ss_pred eCC------CCceEEEcCCCCCCCCC--ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeee
Q psy1288 136 DSL------DGEARVFLDPNNLSDDG--TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVS 207 (1012)
Q Consensus 136 ~~~------~g~~~~L~D~n~la~~g--~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~ 207 (1012)
... .++|++|+|+++|+++. .+.....+.+|||++++|+.+.+|+++..++++|+++|+..... +..+..
T Consensus 81 ttl~syrs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~~fv~~~--~f~~~~ 158 (648)
T COG1505 81 TTLETYRSAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETGEFVEEE--GFKFPG 158 (648)
T ss_pred ecceeecccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEecccccccCC--Cccccc
Confidence 643 57899999999998773 67788888889999999999999999999999999999876543 223344
Q ss_pred eEEeeCCCeEEEEecCCCC----Cccc------------CCCCCceEEEEee--------------c-----------cc
Q psy1288 208 IAWTHDHKGVFYSNQEPKS----KSKK------------HSKKNRSSAYHLT--------------V-----------NV 246 (1012)
Q Consensus 208 ~~WSpDG~~l~y~~~~~~~----~g~~------------~~~~~~~l~~~~~--------------~-----------~~ 246 (1012)
+.|..++ +++|.+..... .|.. ...+....++... . +.
T Consensus 159 ~~wld~d-~~~~~~~~~~~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 237 (648)
T COG1505 159 ISWLDDD-GVFVSRYWRPKEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGDFFMLSLWLGTSG 237 (648)
T ss_pred eEEecCC-CEEEecccCCcccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccchhhheeeEeccC
Confidence 8999887 66666533211 1110 0001111111000 0 00
Q ss_pred cc-eeee---eeecCCCEEEEEECCC-----CCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcC
Q psy1288 247 AP-ITSQ---YITNEGPQFVFKTNKD-----APNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHH 317 (1012)
Q Consensus 247 ~~-i~~~---~~s~dg~~l~~~tn~~-----~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (1012)
++ +... ..+-.-++|++....+ .....|+.......+......++.......++++...+ +.+++...++
T Consensus 238 ~~~~~l~~p~~~~~~~~~l~~~~r~dw~~~~~~~g~l~l~~~e~~~~g~~~a~~~P~~~~~le~v~tt~-~~~va~~l~n 316 (648)
T COG1505 238 KGLIKLGLPDKVGYEWGKLVNTLRADWTFADVDYGLLYLLTDEDLELGKVIAEFIPEEEQSLEQVVTTK-DKLVAGTLDN 316 (648)
T ss_pred CCceeccCCccccceeeeeeEeecccccccCcccceEEEEehhccccCceeEEecCCcccceeeeEEEc-CeEEeeeehh
Confidence 00 0000 0111123344433221 11233333332221111122244444567788888887 8899999999
Q ss_pred ceEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEEEEecCCCCCcEEEEEeCCCCCCCCCCcceEEEEeccCCCC
Q psy1288 318 VKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDPNSKLETSIFREIKVPDF 396 (1012)
Q Consensus 318 g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~~~~~~g~~~~~~l~~~~~~~~ 396 (1012)
..+++.+++. .|...+.++++ .+.+..++.+.+|+++++.++++++|+++|++++ .++ +.+.+++. ...|
T Consensus 317 v~~~l~v~~~-~g~~~~~v~l~~~ga~~~~~~~~~g~ev~l~~t~F~tP~~~~r~~~-----~~~--eLe~ik~~-p~~F 387 (648)
T COG1505 317 VSGRLEVYDL-KGERIEEVELPPPGALGMGSADKDGDEVFLAFTSFTTPSTLYRLDL-----FGG--ELEVIREQ-PVQF 387 (648)
T ss_pred ccceEEEecc-CceEeeecccCCccceeeccCCCCCcEEEEEeecccCCCceEEEec-----CCc--eehhhhhc-cCCc
Confidence 9999999998 56666777776 5666555667788999999999999999999998 344 55666653 3469
Q ss_pred CCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCC
Q psy1288 397 DPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEY 476 (1012)
Q Consensus 397 ~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~ 476 (1012)
+++++.+++.+.+|.||++||+++++ ++.+.+ +.|++|+.|||+..+.+|.|++....||. +|.+++.+|+||+|+|
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLe-rGg~~v~ANIRGGGEf 464 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLE-RGGVFVLANIRGGGEF 464 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHh-cCCeEEEEecccCCcc
Confidence 99999999999999999999999999 887777 89999999999999999999998888888 6999999999999999
Q ss_pred chhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCccee
Q psy1288 477 GERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWL 556 (1012)
Q Consensus 477 g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~ 556 (1012)
|..||+++.+..+++.|+||.++++.|++++++.|++|+|.|+|+||+++..+++++|++|.|+|+.+|
T Consensus 465 Gp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP----------- 533 (648)
T COG1505 465 GPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP----------- 533 (648)
T ss_pred CHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCC
Q psy1288 557 IVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQ 636 (1012)
Q Consensus 557 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~ 636 (1012)
++||+||+.+.+|..|+.|||+|.+|+++..+.+|||++|++
T Consensus 534 --------------------------------------llDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~ 575 (648)
T COG1505 534 --------------------------------------LLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLK 575 (648)
T ss_pred --------------------------------------hhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCC
Confidence 899999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHH
Q psy1288 637 GPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFY 716 (1012)
Q Consensus 637 ~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl 716 (1012)
++.+||++||.++.+|.||+|+|+++|+++|+++ +.++.++.+-++||+.+.+..+...+.++.+.||
T Consensus 576 -----~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~-------~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl 643 (648)
T COG1505 576 -----PGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV-------GAPVLLREETKGGHGGAAPTAEIARELADLLAFL 643 (648)
T ss_pred -----ccccCCCeEEEcccccccccchHHHHHHHHHHhc-------CCceEEEeecCCcccCCCChHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999 8999999999999999998888789999999999
Q ss_pred HHhC
Q psy1288 717 LTSG 720 (1012)
Q Consensus 717 ~~~l 720 (1012)
.+.|
T Consensus 644 ~r~L 647 (648)
T COG1505 644 LRTL 647 (648)
T ss_pred HHhh
Confidence 9876
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=7.5e-39 Score=372.55 Aligned_cols=342 Identities=33% Similarity=0.615 Sum_probs=264.5
Q ss_pred CCCccCcceeecccCccccCCCCCCCCCCCHHHHHHHHHhhhchHhhhccC-CChHHHHHHHhhcccCCCCCCCeeeCCE
Q psy1288 39 PKARKNESLVDEYHGVKIPDPYGWMEDPDSEETKKFVDEENAISRPYLEDH-PDRDKVKAELTKMWDYPKYSSPQRQGDH 117 (1012)
Q Consensus 39 P~a~~~~~~~~~~hG~~~~Dpy~WLed~~~~~~~~~l~~qn~~t~~~l~~~-~~~~~l~~~~~~~~~~~~~s~p~~dG~~ 117 (1012)
|+++|++.+++++||+++.|||+||||.++|+|++||++||+|++++|+++ ++++.|.++|++++..++.++|...|++
T Consensus 1 P~~~~~~~~~~~~hg~~~~DpY~WLed~~~~~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~ 80 (414)
T PF02897_consen 1 PPTARKPPVVETLHGVTITDPYRWLEDDDSPEVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRGGY 80 (414)
T ss_dssp S-TTS-TTSEEEETTEEEE-TTGGGGSTTSHHHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEETTE
T ss_pred CCCCCCCCeeeecCCCEeecCchhhcCCCCHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEECCe
Confidence 444444435599999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred EEEEEEcCCCCeeEEEEEeCC--CCc-eEEEcCCCCCCCCC-ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy1288 118 YFFFHNTGLQNHSVMYIQDSL--DGE-ARVFLDPNNLSDDG-TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATG 193 (1012)
Q Consensus 118 ~yy~~~~~~~~~~~l~~~~~~--~g~-~~~L~D~n~la~~g-~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg 193 (1012)
+||.+..+++++..+||+... +++ +++|+|+|++++++ ...++.+++||||++|||+++.+|+++++|+++|+++|
T Consensus 81 ~y~~~~~~~~~~~~~~r~~~~~~~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg 160 (414)
T PF02897_consen 81 YYYSRNQGGKNYPVLYRRKTDEEDGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETG 160 (414)
T ss_dssp EEEEEE-SS-SS-EEEEEETTS-TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTT
T ss_pred EEEEEEcCCCceEEEEEEecccCCCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCC
Confidence 999999888889999999887 344 59999999999886 67788999999999999999999999999999999999
Q ss_pred ceeceeecceeeeeeEEeeCCCeEEEEecCCCCC---------------cccCCCCCceEEEEee---------------
Q psy1288 194 KEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSK---------------SKKHSKKNRSSAYHLT--------------- 243 (1012)
Q Consensus 194 ~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~---------------g~~~~~~~~~l~~~~~--------------- 243 (1012)
+.+.+.+.....+++.|++||+.|+|++.+.... |+ . .....++|.+.
T Consensus 161 ~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt-~-~~~d~lvfe~~~~~~~~~~~~~s~d~ 238 (414)
T PF02897_consen 161 KFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGT-P-QSEDELVFEEPDEPFWFVSVSRSKDG 238 (414)
T ss_dssp EEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS---GGG-EEEEC-TTCTTSEEEEEE-TTS
T ss_pred cCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCC-C-hHhCeeEEeecCCCcEEEEEEecCcc
Confidence 9888777777656699999999999998544211 11 0 00111222110
Q ss_pred ----------cc--c-------c------cee---------eeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcE-
Q psy1288 244 ----------VN--V-------A------PIT---------SQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWK- 288 (1012)
Q Consensus 244 ----------~~--~-------~------~i~---------~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~- 288 (1012)
.. . . ... ...+.+.|+.||+++|.++++++|++++++.+....|.
T Consensus 239 ~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~ 318 (414)
T PF02897_consen 239 RYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWT 318 (414)
T ss_dssp SEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEE
T ss_pred cEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEeccccccccccee
Confidence 00 0 1 000 22356679999999999999999999999988755566
Q ss_pred EeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEEEEecCCCCCcE
Q psy1288 289 TLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIFYSFMSFLQPTI 367 (1012)
Q Consensus 289 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss~~~p~~ 367 (1012)
.++++.+...+..+..++ ++|++.++.++.++|.++++..+.....++++ .+++.+.+.+++++.++|.++++.+|+.
T Consensus 319 ~l~~~~~~~~l~~~~~~~-~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~ 397 (414)
T PF02897_consen 319 VLIPEDEDVSLEDVSLFK-DYLVLSYRENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPT 397 (414)
T ss_dssp EEE--SSSEEEEEEEEET-TEEEEEEEETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEE
T ss_pred EEcCCCCceeEEEEEEEC-CEEEEEEEECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCE
Confidence 666666666888888776 89999999999999999999536655667766 6777788888899999999999999999
Q ss_pred EEEEeCCCCCCCCCCcceEEEEe
Q psy1288 368 IFHCNIPARVDPNSKLETSIFRE 390 (1012)
Q Consensus 368 l~~~d~~~~~~~~g~~~~~~l~~ 390 (1012)
+|.+|+ +++ +.+++++
T Consensus 398 ~y~~d~-----~t~--~~~~~k~ 413 (414)
T PF02897_consen 398 VYRYDL-----ATG--ELTLLKQ 413 (414)
T ss_dssp EEEEET-----TTT--CEEEEEE
T ss_pred EEEEEC-----CCC--CEEEEEe
Confidence 999999 577 5666654
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-36 Score=359.15 Aligned_cols=515 Identities=19% Similarity=0.234 Sum_probs=347.2
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEe-----CCC-------
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLS-----SSG------- 179 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~-----~~G------- 179 (1012)
+|+|..+++..+.++ ...++|+.+.. + .+.. ....+....|||+|+.+++... ..|
T Consensus 68 spdg~~~~~~~~~~~-~~~~l~l~~~~-g---~~~~-------~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 135 (620)
T COG1506 68 SPDGSVLAFVSTDGG-RVAQLYLVDVG-G---LITK-------TAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVD 135 (620)
T ss_pred CCCCCEEEEEeccCC-CcceEEEEecC-C---ceee-------eecccccceeCCCCCeEEEEecccccccCCceeeeec
Confidence 599999999985543 36788888765 3 1111 1245778999999999999321 112
Q ss_pred ----------CceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCC-CCcc----cCCCCCceEEEEeec
Q psy1288 180 ----------SDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPK-SKSK----KHSKKNRSSAYHLTV 244 (1012)
Q Consensus 180 ----------~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~-~~g~----~~~~~~~~l~~~~~~ 244 (1012)
.+..+++++|.++ +..........+..++|.+|++.++....... .... .....+..+.... .
T Consensus 136 ~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 213 (620)
T COG1506 136 RLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLT-P 213 (620)
T ss_pred ccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEc-C
Confidence 1456788888766 33333344444566777777777777654422 1000 0000000000000 0
Q ss_pred cccceeeeeeecCCCEEEEEECCCC----CCceEEEEeCCCCcccCcEEeeccCC---C-ceeeeeEEecCCEEEEEEEc
Q psy1288 245 NVAPITSQYITNEGPQFVFKTNKDA----PNYRLITIDFDNFAESNWKTLIEENK---D-DVLDWATCVANDKLILSYIH 316 (1012)
Q Consensus 245 ~~~~i~~~~~s~dg~~l~~~tn~~~----~~~~L~~~dl~~~~~~~~~~l~~~~~---~-~~~~~~~~~~~~~l~~~~~~ 316 (1012)
....+....+.++|+.+++..+... ....++..+....+. .......+ . ..+... .+++.+++....
T Consensus 214 ~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 288 (620)
T COG1506 214 GEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEV---DGDLSSGDDTRGAWAVEGG--LDGDGLLFIATD 288 (620)
T ss_pred CCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEecccccc---ceeeccCCcccCcHHhccc--cCCCcEEEEEec
Confidence 0012334457889998888876432 233444444222221 11111111 0 001111 233556665555
Q ss_pred -CceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCCCCCCCCCCcceEEEEeccCCC
Q psy1288 317 -HVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDPNSKLETSIFREIKVPD 395 (1012)
Q Consensus 317 -~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~~~~~~g~~~~~~l~~~~~~~ 395 (1012)
.+...++..+...+. ...+..+.+.+..++. +++.+++..+++..|+++|.++. .. +.+++.. ....
T Consensus 289 ~~g~~~l~~~~~~~~~-~~~~~~~~~~v~~f~~--~~~~~~~~~s~~~~p~~i~~~~~------~~--~~~~~~~-~~~~ 356 (620)
T COG1506 289 GGGSSPLFRVDDLGGG-VEGLSGDDGGVPGFDV--DGRKLALAYSSPTEPPEIYLYDR------GE--EAKLTSS-NNSG 356 (620)
T ss_pred CCCceEEEEEeccCCc-eeeecCCCceEEEEee--CCCEEEEEecCCCCccceEEEcC------CC--ceEEeec-cccc
Confidence 555555555542222 2334444466666654 88999999999999999999985 11 2222222 1222
Q ss_pred C-CCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCC
Q psy1288 396 F-DPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGG 474 (1012)
Q Consensus 396 ~-~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g 474 (1012)
+ ......++.+++.+.||.+|.++++.|.++++.+++|+||++|||+.......|.... +.++.+||+|+.+|+||++
T Consensus 357 ~~~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~-q~~~~~G~~V~~~n~RGS~ 435 (620)
T COG1506 357 LKKVKLAEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEI-QVLASAGYAVLAPNYRGST 435 (620)
T ss_pred ccccccCCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhh-HHHhcCCeEEEEeCCCCCC
Confidence 2 2234578999999999999999999999998888899999999999777776777664 5566689999999999999
Q ss_pred CCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcc
Q psy1288 475 EYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGR 554 (1012)
Q Consensus 475 ~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~ 554 (1012)
+||+.|.+...+.++...++|+.++++++.+.+.+|++||+|+|+|+||+|+++++++.| +|+++++..+ +++|..
T Consensus 436 GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~---~~~~~~ 511 (620)
T COG1506 436 GYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAG---GVDWLL 511 (620)
T ss_pred ccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccC---cchhhh
Confidence 999999999999999999999999999999999999999999999999999999999877 8888888877 433211
Q ss_pred eeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccC
Q psy1288 555 WLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHN 634 (1012)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~ 634 (1012)
.+. ..+. ... ..+....+.+.. ..+.++..||+.+
T Consensus 512 ~~~----------------~~~~-------------------~~~--------~~~~~~~~~~~~--~~~~~~~~sp~~~ 546 (620)
T COG1506 512 YFG----------------ESTE-------------------GLR--------FDPEENGGGPPE--DREKYEDRSPIFY 546 (620)
T ss_pred hcc----------------ccch-------------------hhc--------CCHHHhCCCccc--ChHHHHhcChhhh
Confidence 110 0000 000 001011122221 3456899999999
Q ss_pred CCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHH
Q psy1288 635 IQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIY 714 (1012)
Q Consensus 635 ~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~ 714 (1012)
+. ++++| +|+|||..|.+|+..|+.+++.+|+.. +++++++++|+++|++..+.+ ..+.+..+++
T Consensus 547 ~~------~i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~-------g~~~~~~~~p~e~H~~~~~~~-~~~~~~~~~~ 611 (620)
T COG1506 547 AD------NIKTP-LLLIHGEEDDRVPIEQAEQLVDALKRK-------GKPVELVVFPDEGHGFSRPEN-RVKVLKEILD 611 (620)
T ss_pred hc------ccCCC-EEEEeecCCccCChHHHHHHHHHHHHc-------CceEEEEEeCCCCcCCCCchh-HHHHHHHHHH
Confidence 88 78999 999999999999999999999999998 999999999999999988544 4678889999
Q ss_pred HHHHhCCC
Q psy1288 715 FYLTSGPV 722 (1012)
Q Consensus 715 fl~~~l~~ 722 (1012)
|+.++++.
T Consensus 612 ~~~~~~~~ 619 (620)
T COG1506 612 WFKRHLKQ 619 (620)
T ss_pred HHHHHhcC
Confidence 99999764
No 7
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.97 E-value=9.3e-32 Score=301.76 Aligned_cols=133 Identities=27% Similarity=0.596 Sum_probs=120.2
Q ss_pred CEEEEEe--CCCCCCCCCCchhhhhhhhhccCCCCcccccccceEE-eeccCCCCcEEEEeeCCCCCCCCCCcceeEEEe
Q psy1288 854 PLLIRIE--TKAGHGGGKPTTKQLCVRYMMGGHFTVEFIRSVTTIR-TFMSFLQPTIIFHCNIPARVDPNSKLETSIFRE 930 (1012)
Q Consensus 854 ~~~~~~~--~~~gH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1012)
|...+.. .+|-|++. .....+.++++.|+||+ +..+| .|+||+||.++|+|||.++ ++++||+
T Consensus 340 p~v~v~~~~~~~~~~i~-----f~~~ay~~~l~~~~e~~--s~~lR~~ysS~ttP~~~~~~dm~t~-------er~~Lkq 405 (682)
T COG1770 340 PRVVVRDRKTGEERGIA-----FDDEAYSAGLSGNPEFD--SDRLRYSYSSMTTPATLFDYDMATG-------ERTLLKQ 405 (682)
T ss_pred ceEEEEecCCCceeeEE-----ecchhhhccccCCCCCC--CccEEEEeecccccceeEEeeccCC-------cEEEEEe
Confidence 6666553 34556543 22345778889999999 99999 9999999999999999998 9999999
Q ss_pred eecCC-cCCCCcEEEEEEEeCCCCceeceEEEEecCCCCCCCCceEEEeccccCCCCCCCccccceecccc
Q psy1288 931 IKVPD-FDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRD 1000 (1012)
Q Consensus 931 ~~~~~-~~~~~y~~~~~~~~~~dg~~vp~~~~~~~~~~~~~~~p~~l~gyg~y~~~~~p~f~~~~~~l~~~ 1000 (1012)
|+||+ |||++|++||+||+++||++||||||||||.+++|++|||||||||||+||+|+||..|||||||
T Consensus 406 qeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR 476 (682)
T COG1770 406 QEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR 476 (682)
T ss_pred ccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecC
Confidence 99995 99999999999999999999999999999999999999999999999999999999999999998
No 8
>PRK10115 protease 2; Provisional
Probab=99.96 E-value=1.5e-26 Score=280.57 Aligned_cols=198 Identities=17% Similarity=0.177 Sum_probs=149.1
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc------hhhhhHHHHHHH
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ------FPLTIPVIYFYL 717 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~------~~~~~~~~~fl~ 717 (1012)
.+.|.+|.+||+......+..+.. .+.... .+.+++..|.+||.|+|+.+.+. ...+.|.++.++
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~--~~~l~~-------rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~ 513 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFS--RLSLLD-------RGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACD 513 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHH--HHHHHH-------CCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHH
Confidence 356999999999655544443322 234444 78999999999999999765442 123344444444
Q ss_pred HhCCCCCCCCCCCCCc--cCCccccccCccceeeeccccccccchhh-----hcccccCCCCC---CCCCCCcccCCCCC
Q psy1288 718 TSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTDQKDDILIA-----EVLDMLKFNKF---TIGYFWESDYGSPA 787 (1012)
Q Consensus 718 ~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~g~~~ 787 (1012)
..+.. ++.++.+++ ||||| ||.++++++++|++|.| |++||++++.. .....|+.|||+|+
T Consensus 514 ~Lv~~--g~~d~~rl~i~G~S~G-------G~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~ 584 (686)
T PRK10115 514 ALLKL--GYGSPSLCYGMGGSAG-------GMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQ 584 (686)
T ss_pred HHHHc--CCCChHHeEEEEECHH-------HHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCC
Confidence 33333 677788887 99999 88887888888888866 89999988532 23444668999999
Q ss_pred ChhhhhHhHcCCCCCCCCCCCCCCCCCCCc-eEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 788 NSSQFEYLLGYSPLHNIQGPNELKGKQYPA-TLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 788 ~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p-~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
++++++.+..+||++||+ ++++| +||+||+||+|||++|++||+++||++|++ .++++|.+.+++|||
T Consensus 585 ~~~~~~~l~~~SP~~~v~-------~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~----~~~vl~~~~~~~GHg 653 (686)
T PRK10115 585 DPQYYEYMKSYSPYDNVT-------AQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD----DHLLLLCTDMDSGHG 653 (686)
T ss_pred CHHHHHHHHHcCchhccC-------ccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCC----CceEEEEecCCCCCC
Confidence 888899999999999999 78888 678899999999999999999999999882 234555555999999
Q ss_pred CCCC
Q psy1288 867 GGKP 870 (1012)
Q Consensus 867 ~~~~ 870 (1012)
..+.
T Consensus 654 ~~~~ 657 (686)
T PRK10115 654 GKSG 657 (686)
T ss_pred CCcC
Confidence 6553
No 9
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.95 E-value=4.2e-27 Score=284.15 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=159.5
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccch------hhhhHHHHHH
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQF------PLTIPVIYFY 716 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~------~~~~~~~~fl 716 (1012)
+++||.+|.+||++..++. .++.+..+..+. .+++++.+|++|+.|+|+.+.+.. .++.|+++.+
T Consensus 391 ~k~yP~i~~~hGGP~~~~~--~~~~~~~q~~~~-------~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~ 461 (620)
T COG1506 391 RKKYPLIVYIHGGPSAQVG--YSFNPEIQVLAS-------AGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAV 461 (620)
T ss_pred CCCCCEEEEeCCCCccccc--cccchhhHHHhc-------CCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHH
Confidence 4679999999999766555 566777777777 899999999999999988765532 3556666666
Q ss_pred HHhCCCCCCCCCCCCCc--cCCccccccCccceeeeccccccccchhh-----hcccccCCCCCCCCCCCcc--c-CCCC
Q psy1288 717 LTSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTDQKDDILIA-----EVLDMLKFNKFTIGYFWES--D-YGSP 786 (1012)
Q Consensus 717 ~~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~-~g~~ 786 (1012)
+..... +..|+.+++ |+||| +||+++++++.+ .|.| +++||+.++.......|.. + .+.+
T Consensus 462 ~~l~~~--~~~d~~ri~i~G~SyG-------Gymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (620)
T COG1506 462 DALVKL--PLVDPERIGITGGSYG-------GYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGP 531 (620)
T ss_pred HHHHhC--CCcChHHeEEeccChH-------HHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCc
Confidence 622222 556666666 99999 999999999988 5544 5666666655544443432 2 2322
Q ss_pred CChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 787 ANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 787 ~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
.. +.+.++.+||+++++ ++++|+|||||++|+|||+.||++|+++||++|+ +++|++||+|||+
T Consensus 532 ~~--~~~~~~~~sp~~~~~-------~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~-------~~~~~~~p~e~H~ 595 (620)
T COG1506 532 PE--DREKYEDRSPIFYAD-------NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGK-------PVELVVFPDEGHG 595 (620)
T ss_pred cc--ChHHHHhcChhhhhc-------ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCc-------eEEEEEeCCCCcC
Confidence 21 567789999999999 9999999999999999999999999999999999 9999999999999
Q ss_pred CCCCchhhhhhhhhcc
Q psy1288 867 GGKPTTKQLCVRYMMG 882 (1012)
Q Consensus 867 ~~~~~~~~~~~~~~~~ 882 (1012)
+.++.|++..+..++.
T Consensus 596 ~~~~~~~~~~~~~~~~ 611 (620)
T COG1506 596 FSRPENRVKVLKEILD 611 (620)
T ss_pred CCCchhHHHHHHHHHH
Confidence 9999888877766543
No 10
>KOG2100|consensus
Probab=99.93 E-value=7.8e-22 Score=239.61 Aligned_cols=337 Identities=17% Similarity=0.152 Sum_probs=239.0
Q ss_pred cCCEEEEEEEcC--ceEEEEEEecCCCceeeeecCC----ceEEEeecccccCcEEEEEecCCCCCcEEEEEeCCCCCCC
Q psy1288 306 ANDKLILSYIHH--VKNVMHLHDLASGKHLYTFPLD----VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDP 379 (1012)
Q Consensus 306 ~~~~l~~~~~~~--g~~~l~~~dl~~G~~~~~l~~~----~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~~~~~ 379 (1012)
+.+.+++..... +..+|+.+++.++.. ..++.. ...+...+++...+.++..+..+..|.. .+... .
T Consensus 398 ~~~~i~f~~~~~~~~~~~ly~i~~~~~~~-~~lt~~~~~~~~~~~~~~~~~~~~~~v~~~~gP~~p~~--~~~~~----~ 470 (755)
T KOG2100|consen 398 DSNRIYFDAYEEDPSERHLYSISLGSGTV-ESLTCSLITGPCTYLSVSFSKSAKYYVLSCSGPKVPDG--QLTRH----S 470 (755)
T ss_pred CCceEEEEecCCCCCceEEEEEEcccccc-ccccccCCCCcceEEEEecCCcccEEEEEccCCCCCcc--eeecc----c
Confidence 446777777664 457888888865432 234433 2344455666666777777766666643 12211 0
Q ss_pred CCC-cceEEEEecc-CC----CCCCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCC-CCcCh
Q psy1288 380 NSK-LETSIFREIK-VP----DFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQ-PGFSV 452 (1012)
Q Consensus 380 ~g~-~~~~~l~~~~-~~----~~~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~ 452 (1012)
+.. .+...|.... .. .+.......+.+.+ ||....+.+..|+++...++.|+++.+|||++.... ..|..
T Consensus 471 ~~~~~~~~~Le~n~~~~~~~~~~~~p~~~~~~i~~---~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~ 547 (755)
T KOG2100|consen 471 SKNSKTIVVLETNEELKKTIENVALPIVEFGKIEI---DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSV 547 (755)
T ss_pred cccceEEEEeccChhhHHHhhcccCCcceeEEEEe---ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEe
Confidence 110 0112222211 00 11111223344444 899999999999999999999999999999974432 23333
Q ss_pred hHH-HHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHh
Q psy1288 453 TKI-VFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACIN 531 (1012)
Q Consensus 453 ~~~-~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 531 (1012)
.+. ..+..+|++|+.+|.||++++|..+.....+..+....+|.+.+++++++..++|++||+|+|+|+||++++.++.
T Consensus 548 ~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~ 627 (755)
T KOG2100|consen 548 DWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLE 627 (755)
T ss_pred cHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhh
Confidence 332 2355679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCC-CceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhcccccccccc
Q psy1288 532 QRP-DLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFW 610 (1012)
Q Consensus 532 ~~p-~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~ 610 (1012)
..| +.|+|+++.+| |+||..+.++ +
T Consensus 628 ~~~~~~fkcgvavaP---Vtd~~~yds~---------------------------------------------------~ 653 (755)
T KOG2100|consen 628 SDPGDVFKCGVAVAP---VTDWLYYDST---------------------------------------------------Y 653 (755)
T ss_pred hCcCceEEEEEEecc---eeeeeeeccc---------------------------------------------------c
Confidence 987 78999999999 8876522111 1
Q ss_pred cccc-CCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEE
Q psy1288 611 ESDY-GSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIR 689 (1012)
Q Consensus 611 ~~~~-g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~ 689 (1012)
.++| |.|.+.. ..+...++...+. .++.|-+|++||..|.+|++.++.+++.+|+.+ |.++.+.
T Consensus 654 terymg~p~~~~--~~y~e~~~~~~~~------~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~-------gv~~~~~ 718 (755)
T KOG2100|consen 654 TERYMGLPSEND--KGYEESSVSSPAN------NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNA-------GVPFRLL 718 (755)
T ss_pred cHhhcCCCcccc--chhhhccccchhh------hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHC-------CCceEEE
Confidence 1233 4443221 1255566666665 567776899999999999999999999999999 9999999
Q ss_pred EeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 690 IETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 690 ~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
+||++.|++...... ...+..+..|+..++..
T Consensus 719 vypde~H~is~~~~~-~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 719 VYPDENHGISYVEVI-SHLYEKLDRFLRDCFGS 750 (755)
T ss_pred EeCCCCcccccccch-HHHHHHHHHHHHHHcCc
Confidence 999999999875432 35666777898877654
No 11
>KOG2281|consensus
Probab=99.93 E-value=2.3e-23 Score=229.93 Aligned_cols=334 Identities=16% Similarity=0.207 Sum_probs=234.8
Q ss_pred EEEEEEEcCc--eEEEEEEecC-CCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCCCCCCCCCCcce
Q psy1288 309 KLILSYIHHV--KNVMHLHDLA-SGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDPNSKLET 385 (1012)
Q Consensus 309 ~l~~~~~~~g--~~~l~~~dl~-~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~~~~~~g~~~~ 385 (1012)
.+++..+.++ ..+|++..+. .|+. .+++.+..+. ....+.+=+.++..+++-..|+.+..+.+. .++...
T Consensus 517 LVYf~gt~d~PlE~hLyvvsye~~g~~-~rlt~~g~sh-~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls-----~~~~~~ 589 (867)
T KOG2281|consen 517 LVYFVGTKDTPLEHHLYVVSYENPGEI-ARLTEPGYSH-SCELDQQCDHFVSYYSSVGSPPCVSLYSLS-----WPENDP 589 (867)
T ss_pred EEEEEccCCCCceeeEEEEEEecCCce-eeccCCCccc-chhhhhhhhhHhhhhhcCCCCceEEEEecc-----CCccCc
Confidence 4566666665 3689998886 4554 5566553222 112333334455566788889988877762 221011
Q ss_pred EEEEecc-----C-CCCCCCCCc-eEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCC-CCcCh---hH
Q psy1288 386 SIFREIK-----V-PDFDPSLFE-TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQ-PGFSV---TK 454 (1012)
Q Consensus 386 ~~l~~~~-----~-~~~~~~~~~-~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~---~~ 454 (1012)
+..+.. . ....+.++. ++-+.+.++.|..+.+.++.|.++++.+++|+++++|||++.++- ..|.. ..
T Consensus 590 -l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR 668 (867)
T KOG2281|consen 590 -LPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLR 668 (867)
T ss_pred -ccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhh
Confidence 111110 0 011223443 466778888899999999999999999999999999999988753 33432 23
Q ss_pred HHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 455 IVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIAS-GYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 455 ~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
...|+++||+|+.+|-||+...|..|...-+...+.-.++|.+.++++|.++ +++|++||+|.|+|+||+|++..+.++
T Consensus 669 ~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~ 748 (867)
T KOG2281|consen 669 FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY 748 (867)
T ss_pred hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC
Confidence 4567889999999999999999999988888888999999999999999998 589999999999999999999999999
Q ss_pred CCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccc
Q psy1288 534 PDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESD 613 (1012)
Q Consensus 534 p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~ 613 (1012)
|++|+++|+++| |++|..|.. .+.+.
T Consensus 749 P~IfrvAIAGap---VT~W~~YDT---------------------------------------------------gYTER 774 (867)
T KOG2281|consen 749 PNIFRVAIAGAP---VTDWRLYDT---------------------------------------------------GYTER 774 (867)
T ss_pred cceeeEEeccCc---ceeeeeecc---------------------------------------------------cchhh
Confidence 999999999999 888643321 01111
Q ss_pred c-CCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeC
Q psy1288 614 Y-GSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIET 692 (1012)
Q Consensus 614 ~-g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p 692 (1012)
| |-|...+ +.+.+-|-..++.+ |+...- .+|++||.-|..|++.|...+..+|..+ |++.++.+||
T Consensus 775 YMg~P~~nE--~gY~agSV~~~Vek---lpdepn-RLlLvHGliDENVHF~Hts~Lvs~lvka-------gKpyeL~IfP 841 (867)
T KOG2281|consen 775 YMGYPDNNE--HGYGAGSVAGHVEK---LPDEPN-RLLLVHGLIDENVHFAHTSRLVSALVKA-------GKPYELQIFP 841 (867)
T ss_pred hcCCCccch--hcccchhHHHHHhh---CCCCCc-eEEEEecccccchhhhhHHHHHHHHHhC-------CCceEEEEcc
Confidence 1 2221111 11111122222210 001111 2999999999999999999999999999 9999999999
Q ss_pred CCCCCCCCccccchhhhhHHHHHHHH
Q psy1288 693 KAGHGGGKPTTKQFPLTIPVIYFYLT 718 (1012)
Q Consensus 693 ~~gHg~~~~~~~~~~~~~~~~~fl~~ 718 (1012)
++-|+....... +..-+.++.|+.+
T Consensus 842 ~ERHsiR~~es~-~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 842 NERHSIRNPESG-IYYEARLLHFLQE 866 (867)
T ss_pred ccccccCCCccc-hhHHHHHHHHHhh
Confidence 999998776543 3444567778764
No 12
>KOG2237|consensus
Probab=99.93 E-value=5.1e-26 Score=253.04 Aligned_cols=110 Identities=42% Similarity=0.761 Sum_probs=100.6
Q ss_pred ccccccceEE-eeccCCCCcEEEEeeCCCCCCCCCCcceeEEEeeec--CCcCCCCcEEEEEEEeCCCCceeceEEEEec
Q psy1288 888 EFIRSVTTIR-TFMSFLQPTIIFHCNIPARVDPNSKLETSIFREIKV--PDFDPSLFETKQVFYPSKDGTKIPMFILSRK 964 (1012)
Q Consensus 888 ~~~~~~~~~~-~~~s~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~y~~~~~~~~~~dg~~vp~~~~~~~ 964 (1012)
++. .+++| +|+||++|+++|+||++++. -+..++++..+ ||||+++|+++|+|+.|+|||+|||||||||
T Consensus 390 ~~~--~~~~~f~~sS~l~P~~iy~yDl~~~~-----~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk 462 (712)
T KOG2237|consen 390 DFK--SSTIRFQFSSFLTPGSIYDYDLANGK-----PEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKK 462 (712)
T ss_pred CCC--CceEEEEEeccCCCCeEEEeeccCCC-----CCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEec
Confidence 555 88899 99999999999999999862 25678888877 8999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEeccccCCCCCCCccccceecccccCccc
Q psy1288 965 GAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGKE 1005 (1012)
Q Consensus 965 ~~~~~~~~p~~l~gyg~y~~~~~p~f~~~~~~l~~~~~~~~ 1005 (1012)
+.+++|+.|||||||||||||++|+|+++|||||| +..++
T Consensus 463 ~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vl 502 (712)
T KOG2237|consen 463 DIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVL 502 (712)
T ss_pred hhhhcCCCceEEEEecccceeeccccccceeEEEe-cceEE
Confidence 99999999999999999999999999999999999 55443
No 13
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.92 E-value=5.7e-25 Score=231.66 Aligned_cols=208 Identities=29% Similarity=0.443 Sum_probs=161.5
Q ss_pred CcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q psy1288 449 GFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAA 528 (1012)
Q Consensus 449 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 528 (1012)
.|+ ...++|+++||+|+.+|+||++++|..|...+....+...++|+.+++++++++..+|++||+|+|+|+||++++.
T Consensus 2 ~f~-~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 2 SFN-WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp --S-HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred eee-HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 466 3468888899999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhcccccccc
Q psy1288 529 CINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGY 608 (1012)
Q Consensus 529 ~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~ 608 (1012)
++.++|++|+++++.+| ++|+..+. . ..+. ...
T Consensus 81 ~~~~~~~~f~a~v~~~g---~~d~~~~~----------------------~---------------~~~~-------~~~ 113 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAG---VSDLFSYY----------------------G---------------TTDI-------YTK 113 (213)
T ss_dssp HHHHTCCGSSEEEEESE----SSTTCSB----------------------H---------------HTCC-------HHH
T ss_pred hhcccceeeeeeeccce---ecchhccc----------------------c---------------cccc-------ccc
Confidence 99989999999999999 44422111 0 0000 000
Q ss_pred ccccccCCCC-ChHHHHHHHcCCcccCCCCCCcccC--CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCc
Q psy1288 609 FWESDYGSPA-NSSQFEYLLGYSPLHNIQGPDELKG--KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNP 685 (1012)
Q Consensus 609 ~~~~~~g~p~-~~~~~~~~~~~sP~~~~~~p~~~~~--~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~ 685 (1012)
.+..+++.+. ..+. +...+|+..+. + .+.| +|++||.+|.+||+.++.+++++|+++ +.+
T Consensus 114 ~~~~~~~~~~~~~~~---~~~~s~~~~~~------~~~~~~P-~li~hG~~D~~Vp~~~s~~~~~~L~~~-------g~~ 176 (213)
T PF00326_consen 114 AEYLEYGDPWDNPEF---YRELSPISPAD------NVQIKPP-VLIIHGENDPRVPPSQSLRLYNALRKA-------GKP 176 (213)
T ss_dssp GHHHHHSSTTTSHHH---HHHHHHGGGGG------GCGGGSE-EEEEEETTBSSSTTHHHHHHHHHHHHT-------TSS
T ss_pred ccccccCccchhhhh---hhhhccccccc------cccCCCC-EEEEccCCCCccCHHHHHHHHHHHHhc-------CCC
Confidence 1123455553 3333 44445555544 2 4455 999999999999999999999999998 999
Q ss_pred EEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 686 LLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 686 ~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
++++++|+++|++....... .....+++|++++++.
T Consensus 177 ~~~~~~p~~gH~~~~~~~~~-~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 177 VELLIFPGEGHGFGNPENRR-DWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETT-SSSTTSHHHHH-HHHHHHHHHHHHHTT-
T ss_pred EEEEEcCcCCCCCCCchhHH-HHHHHHHHHHHHHcCC
Confidence 99999999999998776554 7788899999999864
No 14
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.87 E-value=2.5e-22 Score=223.19 Aligned_cols=164 Identities=35% Similarity=0.580 Sum_probs=137.0
Q ss_pred EEEEEeCCCCCCCCCccccc---------hhhhhHHHHHHHHhCCCCCCCCCCCCCc--cCCccccccCccceeeecccc
Q psy1288 686 LLIRIETKAGHGGGKPTTKQ---------FPLTIPVIYFYLTSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTD 754 (1012)
Q Consensus 686 ~~l~~~p~~gHg~~~~~~~~---------~~~~~~~~~fl~~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t 754 (1012)
+-+..|-+||-.||...+++ .++...+.+.|.+. ++..+.+++ |||+| +.-..+++|
T Consensus 452 ~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-----gitspe~lgi~GgSNG-------GLLvg~alT 519 (648)
T COG1505 452 VFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-----GITSPEKLGIQGGSNG-------GLLVGAALT 519 (648)
T ss_pred eEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-----CCCCHHHhhhccCCCC-------ceEEEeeec
Confidence 34445667777777654433 34444444444443 555555665 99999 666669999
Q ss_pred ccccchhh-----hcccccCCCCCCCCCCCcccCCCCCChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCC
Q psy1288 755 QKDDILIA-----EVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRV 829 (1012)
Q Consensus 755 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv 829 (1012)
|||+.|-| |++||++|+..+.|.+|..|||+|++|+++++|.++||++|++ +|+.|||+||.+|.+|.||
T Consensus 520 QrPelfgA~v~evPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~-----~g~kYP~~LITTs~~DDRV 594 (648)
T COG1505 520 QRPELFGAAVCEVPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLK-----PGQKYPPTLITTSLHDDRV 594 (648)
T ss_pred cChhhhCceeeccchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCC-----ccccCCCeEEEcccccccc
Confidence 99999965 8999999999999999999999999999999999999999999 7899999999999999999
Q ss_pred CCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCchh
Q psy1288 830 SPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTK 873 (1012)
Q Consensus 830 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 873 (1012)
+|+||.+|+++||+.|. |+.|+...+.||+.+++..+
T Consensus 595 HPaHarKfaa~L~e~~~-------pv~~~e~t~gGH~g~~~~~~ 631 (648)
T COG1505 595 HPAHARKFAAKLQEVGA-------PVLLREETKGGHGGAAPTAE 631 (648)
T ss_pred cchHHHHHHHHHHhcCC-------ceEEEeecCCcccCCCChHH
Confidence 99999999999999987 99999999999999987443
No 15
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=7.5e-16 Score=178.34 Aligned_cols=261 Identities=12% Similarity=0.084 Sum_probs=169.8
Q ss_pred HHHHHhhcccCCCCCCCeeeCCEEEEEEEcCCC----CeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcE
Q psy1288 95 VKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQ----NHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKT 170 (1012)
Q Consensus 95 l~~~~~~~~~~~~~s~p~~dG~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~ 170 (1012)
+..++...+...-.+.|-.-+.+++|+....+. ....||+++.++++.++||.. ......|+|||||+.
T Consensus 126 ~~h~~~D~~~~~~tg~~g~~~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~-------~~~~~sP~wSPDG~~ 198 (428)
T PRK01029 126 KIHEAADTIHYALTGVPGISSGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQE-------HSLSITPTWMHIGSG 198 (428)
T ss_pred HHHHHHHHHHHHHcCCCccccCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccC-------CCCcccceEccCCCc
Confidence 334444444333334443448999999875432 256999999999989999873 234568999999988
Q ss_pred --EEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCC-cc-----cCC---CCCceEE
Q psy1288 171 --LAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSK-SK-----KHS---KKNRSSA 239 (1012)
Q Consensus 171 --iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~-g~-----~~~---~~~~~l~ 239 (1012)
++|+..+.|. .+||++++++|+.++++........++|||||+.|+|+....... .. .+. +...+++
T Consensus 199 ~~~~y~S~~~g~--~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt 276 (428)
T PRK01029 199 FPYLYVSYKLGV--PKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLL 276 (428)
T ss_pred eEEEEEEccCCC--ceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEee
Confidence 5567777664 599999999999877665444446799999999999997532100 00 000 0001111
Q ss_pred EEeeccccce-eeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCc
Q psy1288 240 YHLTVNVAPI-TSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHV 318 (1012)
Q Consensus 240 ~~~~~~~~~i-~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g 318 (1012)
. ...++ ..+.|+|||++|+|.++++. ..+||.++++.... ..+.+.... .........++++.|++....++
T Consensus 277 ~----~~~~~~~~p~wSPDG~~Laf~s~~~g-~~~ly~~~~~~~g~-~~~~lt~~~-~~~~~p~wSPDG~~Laf~~~~~g 349 (428)
T PRK01029 277 N----EAFGTQGNPSFSPDGTRLVFVSNKDG-RPRIYIMQIDPEGQ-SPRLLTKKY-RNSSCPAWSPDGKKIAFCSVIKG 349 (428)
T ss_pred c----CCCCCcCCeEECCCCCEEEEEECCCC-CceEEEEECccccc-ceEEeccCC-CCccceeECCCCCEEEEEEcCCC
Confidence 0 00111 24569999999999997653 45799988753211 123343332 22222233456678888877777
Q ss_pred eEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 319 KNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 319 ~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..+|+++++++|+. +.++.....+..+.|+|||+.|+|..+.. ....||.+|+
T Consensus 350 ~~~I~v~dl~~g~~-~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~-g~~~L~~vdl 402 (428)
T PRK01029 350 VRQICVYDLATGRD-YQLTTSPENKESPSWAIDSLHLVYSAGNS-NESELYLISL 402 (428)
T ss_pred CcEEEEEECCCCCe-EEccCCCCCccceEECCCCCEEEEEECCC-CCceEEEEEC
Confidence 78999999977765 44554333455688999999999887643 3468999999
No 16
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.71 E-value=1.4e-18 Score=182.91 Aligned_cols=183 Identities=22% Similarity=0.254 Sum_probs=126.5
Q ss_pred HHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc------hhhhhHHHHHHHHhCCCCCCCCCCCCCc--cCCccc
Q psy1288 668 FAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ------FPLTIPVIYFYLTSGPVLQRYPETPNKA--DGSENV 739 (1012)
Q Consensus 668 ~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~------~~~~~~~~~fl~~~l~~~~~~~d~~~~~--GgS~g~ 739 (1012)
+..++.+. .+++++.++.+++.|++..+... ..+..|+++.++..... ...|+.+++ |+|+|
T Consensus 5 ~~~~~la~-------~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~--~~iD~~ri~i~G~S~G- 74 (213)
T PF00326_consen 5 WNAQLLAS-------QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQ--YYIDPDRIGIMGHSYG- 74 (213)
T ss_dssp HHHHHHHT-------TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHT--TSEEEEEEEEEEETHH-
T ss_pred HHHHHHHh-------CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcc--ccccceeEEEEccccc-
Confidence 45566666 88999999999999987654431 23344444444443333 345666776 99999
Q ss_pred cccCccceeeeccccccccchhh-----hcccccCCCCCCCC--CCCcccCCCC-CChhhhhHhHcCCCCCCCCCCCCCC
Q psy1288 740 RNQDQKLYYHYLGTDQKDDILIA-----EVLDMLKFNKFTIG--YFWESDYGSP-ANSSQFEYLLGYSPLHNIQGPNELK 811 (1012)
Q Consensus 740 ~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~g~~-~~~~~~~~~~~~Sp~~~v~~~~~~~ 811 (1012)
++.++++++++|++|.| |++|+..+...... ..+..++|.+ ++++.++.+++++|+.++.
T Consensus 75 ------G~~a~~~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~------ 142 (213)
T PF00326_consen 75 ------GYLALLAATQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQ------ 142 (213)
T ss_dssp ------HHHHHHHHHHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG------
T ss_pred ------ccccchhhcccceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhcccccccccc------
Confidence 77776666666777655 89999888765433 1133456777 4444455555555554410
Q ss_pred CCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCchhhhhhhhhc
Q psy1288 812 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQLCVRYMM 881 (1012)
Q Consensus 812 ~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~ 881 (1012)
+++|+||+||++|.+||+.|+.+|+++|+++|+ |++++++|++||++.++.++......++
T Consensus 143 --~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~-------~~~~~~~p~~gH~~~~~~~~~~~~~~~~ 203 (213)
T PF00326_consen 143 --IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK-------PVELLIFPGEGHGFGNPENRRDWYERIL 203 (213)
T ss_dssp --GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS-------SEEEEEETT-SSSTTSHHHHHHHHHHHH
T ss_pred --CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC-------CEEEEEcCcCCCCCCCchhHHHHHHHHH
Confidence 559999999999999999999999999999988 9999999999999998877776555443
No 17
>KOG2100|consensus
Probab=99.69 E-value=2.4e-14 Score=174.58 Aligned_cols=191 Identities=16% Similarity=0.154 Sum_probs=130.9
Q ss_pred CCCCCcEEEEeeCCCCCCCh-HHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc------hhhhhHHHHH
Q psy1288 643 GKQYPATLLMTADHDDRVSP-VHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ------FPLTIPVIYF 715 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~-~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~------~~~~~~~~~f 715 (1012)
.++||.++.+||+.+.+... .....|...+... .+.+++.++.+|+-++|..+... ..+..|...-
T Consensus 523 ~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~-------~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~ 595 (755)
T KOG2100|consen 523 SKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSS-------RGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEA 595 (755)
T ss_pred CCCCCEEEEecCCCCcceeeeeEEecHHHHhhcc-------CCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHH
Confidence 46999999999997633222 2234455555444 78899999999999988764322 1344444444
Q ss_pred HHHhCCCCCCCCCCCCCc--cCCcc------ccccCc-cceeeeccccccccchhhhcccccCCCCCCCCCCCcccC-CC
Q psy1288 716 YLTSGPVLQRYPETPNKA--DGSEN------VRNQDQ-KLYYHYLGTDQKDDILIAEVLDMLKFNKFTIGYFWESDY-GS 785 (1012)
Q Consensus 716 l~~~l~~~~~~~d~~~~~--GgS~g------~~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~ 785 (1012)
+...+.. .++|+.+++ |+||| .+..++ +.|+|.++ ++||+||. ++..+.. ++| |.
T Consensus 596 ~~~~~~~--~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgva--------vaPVtd~~-~yds~~t----erymg~ 660 (755)
T KOG2100|consen 596 VKKVLKL--PFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVA--------VAPVTDWL-YYDSTYT----ERYMGL 660 (755)
T ss_pred HHHHHhc--ccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEE--------ecceeeee-eeccccc----HhhcCC
Confidence 4444444 377888888 99999 112221 44555444 55999998 6554332 344 66
Q ss_pred CCChhhhhHhHcCCCCCCCCCCCCCCCCCCCce-EEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCC
Q psy1288 786 PANSSQFEYLLGYSPLHNIQGPNELKGKQYPAT-LLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAG 864 (1012)
Q Consensus 786 ~~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~-l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 864 (1012)
|..... .+.+.+|..++. ++++|. |+|||+.|.+|+..||.+++.+||.+|| |+.+++||+|.
T Consensus 661 p~~~~~--~y~e~~~~~~~~-------~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv-------~~~~~vypde~ 724 (755)
T KOG2100|consen 661 PSENDK--GYEESSVSSPAN-------NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGV-------PFRLLVYPDEN 724 (755)
T ss_pred Cccccc--hhhhccccchhh-------hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC-------ceEEEEeCCCC
Confidence 643222 134445555555 555777 9999999999999999999999999999 99999999999
Q ss_pred CCCCCCc
Q psy1288 865 HGGGKPT 871 (1012)
Q Consensus 865 H~~~~~~ 871 (1012)
||++++.
T Consensus 725 H~is~~~ 731 (755)
T KOG2100|consen 725 HGISYVE 731 (755)
T ss_pred ccccccc
Confidence 9999864
No 18
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=8e-15 Score=171.49 Aligned_cols=235 Identities=12% Similarity=0.070 Sum_probs=162.6
Q ss_pred eCCEEEEEEEcCCCC--eeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC
Q psy1288 114 QGDHYFFFHNTGLQN--HSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA 191 (1012)
Q Consensus 114 dG~~~yy~~~~~~~~--~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~ 191 (1012)
-..+++|+...++.+ ...||+.+..+...++|+. +...+..++|||||++|+|+....|. .+||++|++
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~-------~~~~v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~ 234 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTD-------GSSLVLTPRFSPNRQEITYMSYANGR--PRVYLLDLE 234 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEec-------CCCCeEeeEECCCCCEEEEEEecCCC--CEEEEEECC
Confidence 456899998765422 5799999988888888886 33357789999999999999877664 599999999
Q ss_pred CCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc--------ccc-eeeeeeecCCCEEE
Q psy1288 192 TGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN--------VAP-ITSQYITNEGPQFV 262 (1012)
Q Consensus 192 tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~--------~~~-i~~~~~s~dg~~l~ 262 (1012)
+|+.++++........++|||||+.|+|+..... +..++.....+ ... ...+.|+|||++|+
T Consensus 235 ~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g---------~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~ 305 (435)
T PRK05137 235 TGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGG---------NTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIV 305 (435)
T ss_pred CCcEEEeecCCCcccCcEECCCCCEEEEEEecCC---------CceEEEEECCCCceEEccCCCCccCceeEcCCCCEEE
Confidence 9988766543333467999999999999864321 11222211100 011 12356999999999
Q ss_pred EEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceE
Q psy1288 263 FKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGT 342 (1012)
Q Consensus 263 ~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~ 342 (1012)
|.++++. ..+||.+|+++++ .+.++... .........++++.|++.....+..+|++++++++. .+.++.. ..
T Consensus 306 f~s~~~g-~~~Iy~~d~~g~~---~~~lt~~~-~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~-~~ 378 (435)
T PRK05137 306 FESDRSG-SPQLYVMNADGSN---PRRISFGG-GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSG-FL 378 (435)
T ss_pred EEECCCC-CCeEEEEECCCCC---eEEeecCC-CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCC-CC
Confidence 9997654 4689999987654 35555432 222222233566788877766666799999985443 3455443 23
Q ss_pred EEeecccccCcEEEEEecCCCCC--cEEEEEeC
Q psy1288 343 IVGFSGKKKYSEIFYSFMSFLQP--TIIFHCNI 373 (1012)
Q Consensus 343 v~~~~~spdg~~l~~~~ss~~~p--~~l~~~d~ 373 (1012)
+..++|+|||+.|+|..+..... ..||.+|+
T Consensus 379 ~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 379 VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred CCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 55788999999999988754442 57999999
No 19
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=3e-14 Score=163.88 Aligned_cols=228 Identities=9% Similarity=-0.007 Sum_probs=154.9
Q ss_pred EEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcE-EEEEEeCCCCceEEEEEEECCCCce
Q psy1288 117 HYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKT-LAYCLSSSGSDWTSMHFKDVATGKE 195 (1012)
Q Consensus 117 ~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~-iAy~~~~~G~~~~~L~v~dl~tg~~ 195 (1012)
+++|+....+.....||+++.++...++++. +. ....++|||||++ ++|+...++. .+||++|+++|+.
T Consensus 156 r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~-------~~-~~~~p~wSpDG~~~i~y~s~~~~~--~~Iyv~dl~tg~~ 225 (419)
T PRK04043 156 RKVVFSKYTGPKKSNIVLADYTLTYQKVIVK-------GG-LNIFPKWANKEQTAFYYTSYGERK--PTLYKYNLYTGKK 225 (419)
T ss_pred eEEEEEEccCCCcceEEEECCCCCceeEEcc-------CC-CeEeEEECCCCCcEEEEEEccCCC--CEEEEEECCCCcE
Confidence 4444444322246899999998888887776 22 4568999999997 6666554433 4999999999998
Q ss_pred eceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc--------ccc-eeeeeeecCCCEEEEEEC
Q psy1288 196 YPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN--------VAP-ITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 196 ~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~--------~~~-i~~~~~s~dg~~l~~~tn 266 (1012)
++++........+.|||||+.|+|+..... +.+++.....+ ... ...+.|+|||++|+|.++
T Consensus 226 ~~lt~~~g~~~~~~~SPDG~~la~~~~~~g---------~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sd 296 (419)
T PRK04043 226 EKIASSQGMLVVSDVSKDGSKLLLTMAPKG---------QPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSD 296 (419)
T ss_pred EEEecCCCcEEeeEECCCCCEEEEEEccCC---------CcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEEC
Confidence 887654443467899999999999875421 12232222100 011 113469999999999998
Q ss_pred CCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcC------ceEEEEEEecCCCceeeeecCCc
Q psy1288 267 KDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHH------VKNVMHLHDLASGKHLYTFPLDV 340 (1012)
Q Consensus 267 ~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~------g~~~l~~~dl~~G~~~~~l~~~~ 340 (1012)
+.. ..+||.+|+++++ .++++..... . ....++++.+++..... +..+|+++++++|+. +.|+..
T Consensus 297 r~g-~~~Iy~~dl~~g~---~~rlt~~g~~-~--~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~- 367 (419)
T PRK04043 297 RLG-YPNIFMKKLNSGS---VEQVVFHGKN-N--SSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN- 367 (419)
T ss_pred CCC-CceEEEEECCCCC---eEeCccCCCc-C--ceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-
Confidence 753 5789999998776 3456544322 1 23345767887776654 336899999977764 456543
Q ss_pred eEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 341 GTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 341 ~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+....++|+|||+.|+|.... ..-..|+.+++
T Consensus 368 ~~~~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l 399 (419)
T PRK04043 368 GVNQFPRFSSDGGSIMFIKYL-GNQSALGIIRL 399 (419)
T ss_pred CCcCCeEECCCCCEEEEEEcc-CCcEEEEEEec
Confidence 223357899999999998765 34457999998
No 20
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=4.3e-15 Score=170.83 Aligned_cols=214 Identities=11% Similarity=0.113 Sum_probs=149.3
Q ss_pred CCCeeeCCE-EEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEE
Q psy1288 109 SSPQRQGDH-YFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHF 187 (1012)
Q Consensus 109 s~p~~dG~~-~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v 187 (1012)
+.++|||++ +||++.++ ..++||+.+..+++.++|++.. .....+.|||||++|+|+.+..|+ .+||+
T Consensus 193 p~wSpDG~~~i~y~s~~~--~~~~Iyv~dl~tg~~~~lt~~~-------g~~~~~~~SPDG~~la~~~~~~g~--~~Iy~ 261 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGE--RKPTLYKYNLYTGKKEKIASSQ-------GMLVVSDVSKDGSKLLLTMAPKGQ--PDIYL 261 (419)
T ss_pred EEECCCCCcEEEEEEccC--CCCEEEEEECCCCcEEEEecCC-------CcEEeeEECCCCCEEEEEEccCCC--cEEEE
Confidence 455799996 88877764 2469999999889999998732 234568899999999999988764 59999
Q ss_pred EECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc-------cceeeeeeecCCCE
Q psy1288 188 KDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV-------APITSQYITNEGPQ 260 (1012)
Q Consensus 188 ~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~-------~~i~~~~~s~dg~~ 260 (1012)
+|+++|+.++++........+.|||||++|+|++++.. ..+++....... .+.....|||||+.
T Consensus 262 ~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g---------~~~Iy~~dl~~g~~~rlt~~g~~~~~~SPDG~~ 332 (419)
T PRK04043 262 YDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLG---------YPNIFMKKLNSGSVEQVVFHGKNNSSVSTYKNY 332 (419)
T ss_pred EECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCC---------CceEEEEECCCCCeEeCccCCCcCceECCCCCE
Confidence 99999998887765543467899999999999986532 112222211000 01112369999999
Q ss_pred EEEEECCCC-----CCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeee
Q psy1288 261 FVFKTNKDA-----PNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYT 335 (1012)
Q Consensus 261 l~~~tn~~~-----~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~ 335 (1012)
|++..+... ..++|+.+++++++ ++.|+...... .....++|+.+++.....+...|+++++ +|.....
T Consensus 333 Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---~~~LT~~~~~~--~p~~SPDG~~I~f~~~~~~~~~L~~~~l-~g~~~~~ 406 (419)
T PRK04043 333 IVYSSRETNNEFGKNTFNLYLISTNSDY---IRRLTANGVNQ--FPRFSSDGGSIMFIKYLGNQSALGIIRL-NYNKSFL 406 (419)
T ss_pred EEEEEcCCCcccCCCCcEEEEEECCCCC---eEECCCCCCcC--CeEECCCCCEEEEEEccCCcEEEEEEec-CCCeeEE
Confidence 999987542 23799999998776 56666542211 1223456678888887777889999999 5655566
Q ss_pred ecCCceEEEeecc
Q psy1288 336 FPLDVGTIVGFSG 348 (1012)
Q Consensus 336 l~~~~~~v~~~~~ 348 (1012)
++...+.+..++|
T Consensus 407 l~~~~g~~~~p~W 419 (419)
T PRK04043 407 FPLKVGKIQSIDW 419 (419)
T ss_pred eecCCCccCCCCC
Confidence 6655555544443
No 21
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=3.8e-14 Score=164.89 Aligned_cols=233 Identities=12% Similarity=0.047 Sum_probs=159.8
Q ss_pred CCEEEEEEEcC-CCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy1288 115 GDHYFFFHNTG-LQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATG 193 (1012)
Q Consensus 115 G~~~yy~~~~~-~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg 193 (1012)
..+++|+.... +.....||+++..+...++++. +...+..++|||||++|||+....|. .+||++|+++|
T Consensus 163 ~~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~-------~~~~~~~p~wSPDG~~la~~s~~~g~--~~i~i~dl~~G 233 (429)
T PRK03629 163 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHR-------SPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 233 (429)
T ss_pred CCeEEEEEeeCCCCcceeEEEEcCCCCCCEEeec-------CCCceeeeEEcCCCCEEEEEEecCCC--cEEEEEECCCC
Confidence 47888888743 3346799999998888888877 33457889999999999999865553 58999999999
Q ss_pred ceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCCEEEEE
Q psy1288 194 KEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGPQFVFK 264 (1012)
Q Consensus 194 ~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~~l~~~ 264 (1012)
+.++++........+.|||||+.|+|+..... ...++...... ......+.|+|||++|+|.
T Consensus 234 ~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g---------~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~ 304 (429)
T PRK03629 234 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTG---------SLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYT 304 (429)
T ss_pred CeEEccCCCCCcCCeEECCCCCEEEEEEcCCC---------CcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEE
Confidence 87665533333467999999999999864311 11222211100 0122345699999999999
Q ss_pred ECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEE
Q psy1288 265 TNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIV 344 (1012)
Q Consensus 265 tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~ 344 (1012)
+++.. ..+||.+++++++ .+.+.... .........++++.+++....++..+|+++++++|+. +.++.. ....
T Consensus 305 s~~~g-~~~Iy~~d~~~g~---~~~lt~~~-~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~~-~~~~ 377 (429)
T PRK03629 305 SDQAG-RPQVYKVNINGGA---PQRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTDT-FLDE 377 (429)
T ss_pred eCCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCCC-CCCC
Confidence 98653 4689999998765 34454332 1221222335667888877777778899999977754 455533 2233
Q ss_pred eecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 345 GFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 345 ~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.++|+|||+.|+|...... ...|+.+++
T Consensus 378 ~p~~SpDG~~i~~~s~~~~-~~~l~~~~~ 405 (429)
T PRK03629 378 TPSIAPNGTMVIYSSSQGM-GSVLNLVST 405 (429)
T ss_pred CceECCCCCEEEEEEcCCC-ceEEEEEEC
Confidence 6789999999998876432 356888888
No 22
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.66 E-value=2.1e-14 Score=167.75 Aligned_cols=270 Identities=13% Similarity=0.039 Sum_probs=187.7
Q ss_pred hhhchHhhhccCCChHHHHHHHhhcccCCCCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCce
Q psy1288 78 ENAISRPYLEDHPDRDKVKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTV 157 (1012)
Q Consensus 78 qn~~t~~~l~~~~~~~~l~~~~~~~~~~~~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~ 157 (1012)
|+.++.+++...+....+..++...+.+...+.|...+.+++|++..+++++..||+++..++..++|++.+ .
T Consensus 118 ~~~~~~~~~~~~~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~-------~ 190 (417)
T TIGR02800 118 LQLLGKQYTVTASQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSR-------E 190 (417)
T ss_pred EEeeeeeEEcCHHHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCC-------C
Confidence 566777777666777788888888877777778888899999998876566789999998878888888844 2
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCce
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRS 237 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~ 237 (1012)
.+..+.|||||++|||+....+. .+|+++|+++|+.............++|+|||+.|+|+.... ....
T Consensus 191 ~~~~p~~Spdg~~la~~~~~~~~--~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~---------~~~~ 259 (417)
T TIGR02800 191 PILSPAWSPDGQKLAYVSFESGK--PEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKD---------GNPD 259 (417)
T ss_pred ceecccCCCCCCEEEEEEcCCCC--cEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCC---------CCcc
Confidence 35678999999999999876553 589999999997655443332335689999999999986431 1223
Q ss_pred EEEEeeccc--------cc-eeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCC
Q psy1288 238 SAYHLTVNV--------AP-ITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVAND 308 (1012)
Q Consensus 238 l~~~~~~~~--------~~-i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 308 (1012)
++.+...+. .. ...+.|++||++|+|.+++.. ..+||.+++.+++ ++.+.... ..........+++
T Consensus 260 i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g-~~~iy~~d~~~~~---~~~l~~~~-~~~~~~~~spdg~ 334 (417)
T TIGR02800 260 IYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG-SPQIYMMDADGGE---VRRLTFRG-GYNASPSWSPDGD 334 (417)
T ss_pred EEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCC-CceEEEEECCCCC---EEEeecCC-CCccCeEECCCCC
Confidence 333332110 11 113468999999999988654 4589999987655 45555433 2222222334557
Q ss_pred EEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 309 KLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.+++.....+..+|+++++.++.. +.++... ....+.|+||++.|++....... ..++.++.
T Consensus 335 ~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~-~~~~p~~spdg~~l~~~~~~~~~-~~l~~~~~ 396 (417)
T TIGR02800 335 LIAFVHREGGGFNIAVMDLDGGGE-RVLTDTG-LDESPSFAPNGRMILYATTRGGR-GVLGLVST 396 (417)
T ss_pred EEEEEEccCCceEEEEEeCCCCCe-EEccCCC-CCCCceECCCCCEEEEEEeCCCc-EEEEEEEC
Confidence 777777766678999999966543 4444332 23356789999999988775433 56777776
No 23
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=2.1e-13 Score=159.31 Aligned_cols=234 Identities=13% Similarity=0.044 Sum_probs=158.9
Q ss_pred eCCEEEEEEEcCC-CCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy1288 114 QGDHYFFFHNTGL-QNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT 192 (1012)
Q Consensus 114 dG~~~yy~~~~~~-~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t 192 (1012)
-..+++|+....+ .....||+.+..+...++|+. +...+..++|||||++|+|+....| ..+||++|+++
T Consensus 181 f~~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~-------~~~~~~~p~wSPDG~~La~~s~~~g--~~~L~~~dl~t 251 (448)
T PRK04792 181 FLTRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLR-------SPEPLMSPAWSPDGRKLAYVSFENR--KAEIFVQDIYT 251 (448)
T ss_pred ccCEEEEEEeeCCCCCceEEEEEeCCCCCceEeec-------CCCcccCceECCCCCEEEEEEecCC--CcEEEEEECCC
Confidence 3457778776443 235789999988877788887 3345778999999999999988755 35899999999
Q ss_pred CceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc---------cceeeeeeecCCCEEEE
Q psy1288 193 GKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV---------APITSQYITNEGPQFVF 263 (1012)
Q Consensus 193 g~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~---------~~i~~~~~s~dg~~l~~ 263 (1012)
|+..+++........++|||||+.|+|+..... ..+++....... .....+.|+|||++|+|
T Consensus 252 g~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g---------~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f 322 (448)
T PRK04792 252 QVREKVTSFPGINGAPRFSPDGKKLALVLSKDG---------QPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIF 322 (448)
T ss_pred CCeEEecCCCCCcCCeeECCCCCEEEEEEeCCC---------CeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEE
Confidence 987665533333357999999999999864311 123332221100 11124569999999999
Q ss_pred EECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEE
Q psy1288 264 KTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTI 343 (1012)
Q Consensus 264 ~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v 343 (1012)
.++++. ..+||.+++++++ ++.|+..... ........+++.+++....++..+|+++++++|+. +.++.... .
T Consensus 323 ~s~~~g-~~~Iy~~dl~~g~---~~~Lt~~g~~-~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~~~~-d 395 (448)
T PRK04792 323 TSERGG-KPQIYRVNLASGK---VSRLTFEGEQ-NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTSTRL-D 395 (448)
T ss_pred EECCCC-CceEEEEECCCCC---EEEEecCCCC-CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEccCCCC-C
Confidence 987654 4689999997765 4555533322 12222345667888877767778899999976654 44543311 2
Q ss_pred EeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 344 VGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 344 ~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..++|+|||+.|+|..... ....||.++.
T Consensus 396 ~~ps~spdG~~I~~~~~~~-g~~~l~~~~~ 424 (448)
T PRK04792 396 ESPSVAPNGTMVIYSTTYQ-GKQVLAAVSI 424 (448)
T ss_pred CCceECCCCCEEEEEEecC-CceEEEEEEC
Confidence 2467999999999887643 3356888887
No 24
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=3.5e-14 Score=165.86 Aligned_cols=215 Identities=17% Similarity=0.176 Sum_probs=150.6
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|.+.+. +...||+.+..+++.+++++.. .....+.|||||++|+|+.+.+|. .+||++
T Consensus 223 p~wSPDG~~La~~s~~~--g~~~L~~~dl~tg~~~~lt~~~-------g~~~~~~wSPDG~~La~~~~~~g~--~~Iy~~ 291 (448)
T PRK04792 223 PAWSPDGRKLAYVSFEN--RKAEIFVQDIYTQVREKVTSFP-------GINGAPRFSPDGKKLALVLSKDGQ--PEIYVV 291 (448)
T ss_pred ceECCCCCEEEEEEecC--CCcEEEEEECCCCCeEEecCCC-------CCcCCeeECCCCCEEEEEEeCCCC--eEEEEE
Confidence 45579999999998764 3578999999888888877632 123478999999999999887764 589999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCC
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGP 259 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~ 259 (1012)
|+++++.++++........++|||||+.|+|++.+.. ..+++...... ......+.|+|||+
T Consensus 292 dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g---------~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~ 362 (448)
T PRK04792 292 DIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGG---------KPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGR 362 (448)
T ss_pred ECCCCCeEECccCCCCccceEECCCCCEEEEEECCCC---------CceEEEEECCCCCEEEEecCCCCCcCeeECCCCC
Confidence 9999998776655444577999999999999975421 11222211100 00111346999999
Q ss_pred EEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC
Q psy1288 260 QFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD 339 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 339 (1012)
.|+|....+ ..++|+.+|+++++ .+.+.... .. .......+++.|++....++...|++++. +|+..+.++.+
T Consensus 363 ~l~~~~~~~-g~~~I~~~dl~~g~---~~~lt~~~-~d-~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~ 435 (448)
T PRK04792 363 SMIMVNRTN-GKFNIARQDLETGA---MQVLTSTR-LD-ESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAG 435 (448)
T ss_pred EEEEEEecC-CceEEEEEECCCCC---eEEccCCC-CC-CCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCC
Confidence 999987653 46789999998765 33443221 11 11123456678888888888889999998 67666677666
Q ss_pred ceEEEeecccc
Q psy1288 340 VGTIVGFSGKK 350 (1012)
Q Consensus 340 ~~~v~~~~~sp 350 (1012)
.+.+..++|+|
T Consensus 436 ~g~~~~p~Wsp 446 (448)
T PRK04792 436 QGEVKSPAWSP 446 (448)
T ss_pred CCCcCCCccCC
Confidence 56666777876
No 25
>PRK13604 luxD acyl transferase; Provisional
Probab=99.62 E-value=2e-14 Score=154.42 Aligned_cols=228 Identities=14% Similarity=0.094 Sum_probs=142.5
Q ss_pred EEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCC-CCCchhHHhhhh
Q psy1288 407 FYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGG-GEYGERWHDGGR 485 (1012)
Q Consensus 407 ~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~-g~~g~~~~~~~~ 485 (1012)
.+.+.||.+|.+|+..|++. ...+.++|+.+||-.... .+...+..+|.++||.|+.+|.||+ |+.+..+.+...
T Consensus 13 ~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~---~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 13 VICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM---DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred eEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh---HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcc
Confidence 35678999999999999752 246678999999954432 2233456788889999999999876 655554432211
Q ss_pred cCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccc
Q psy1288 486 LLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCK 565 (1012)
Q Consensus 486 ~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~ 565 (1012)
. ....|+.++++|+.++ +.++|+++|+|+||..+..++.. + ..+++|+.+| .+++.+++..
T Consensus 89 s----~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp---~~~l~d~l~~------- 149 (307)
T PRK13604 89 S----IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINE-I-DLSFLITAVG---VVNLRDTLER------- 149 (307)
T ss_pred c----ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCC---cccHHHHHHH-------
Confidence 1 1257999999999876 34689999999999997666654 2 3788999999 4432211100
Q ss_pred cCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCC-hHHHHHHHc------CCcccCCCCC
Q psy1288 566 NNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPAN-SSQFEYLLG------YSPLHNIQGP 638 (1012)
Q Consensus 566 ~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~-~~~~~~~~~------~sP~~~~~~p 638 (1012)
.+...+ ..+|+.. +.+.+.+. |..-. ...+..... .+|...++
T Consensus 150 ----------~~~~~~--~~~p~~~----lp~~~d~~------------g~~l~~~~f~~~~~~~~~~~~~s~i~~~~-- 199 (307)
T PRK13604 150 ----------ALGYDY--LSLPIDE----LPEDLDFE------------GHNLGSEVFVTDCFKHGWDTLDSTINKMK-- 199 (307)
T ss_pred ----------hhhccc--ccCcccc----cccccccc------------cccccHHHHHHHHHhcCccccccHHHHHh--
Confidence 000000 0001000 00000000 00000 011111111 22334344
Q ss_pred CcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCc
Q psy1288 639 DELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 701 (1012)
Q Consensus 639 ~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~ 701 (1012)
+.+.| +|+|||..|..|++.++.+++.++.. .+..++.+++++|.+.+.
T Consensus 200 ----~l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s---------~~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 200 ----GLDIP-FIAFTANNDSWVKQSEVIDLLDSIRS---------EQCKLYSLIGSSHDLGEN 248 (307)
T ss_pred ----hcCCC-EEEEEcCCCCccCHHHHHHHHHHhcc---------CCcEEEEeCCCccccCcc
Confidence 56778 99999999999999999999887542 367899999999998763
No 26
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=2.4e-13 Score=158.27 Aligned_cols=230 Identities=15% Similarity=0.082 Sum_probs=155.8
Q ss_pred CEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce
Q psy1288 116 DHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE 195 (1012)
Q Consensus 116 ~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~ 195 (1012)
.+++|+...+ +...||..+..+...++++.. ...+..++|||||++|||+....+. .+||++|+++|+.
T Consensus 164 ~~iayv~~~~--~~~~L~~~D~dG~~~~~l~~~-------~~~v~~p~wSPDG~~la~~s~~~~~--~~I~~~dl~~g~~ 232 (427)
T PRK02889 164 TRIAYVIKTG--NRYQLQISDADGQNAQSALSS-------PEPIISPAWSPDGTKLAYVSFESKK--PVVYVHDLATGRR 232 (427)
T ss_pred cEEEEEEccC--CccEEEEECCCCCCceEeccC-------CCCcccceEcCCCCEEEEEEccCCC--cEEEEEECCCCCE
Confidence 6788887543 357899999877777777762 2346789999999999999876543 4899999999987
Q ss_pred eceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc--------ccc-eeeeeeecCCCEEEEEEC
Q psy1288 196 YPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN--------VAP-ITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 196 ~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~--------~~~-i~~~~~s~dg~~l~~~tn 266 (1012)
.+++........++|||||+.|+|+..... ...++.....+ ... ...+.|+|||++|+|.++
T Consensus 233 ~~l~~~~g~~~~~~~SPDG~~la~~~~~~g---------~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~ 303 (427)
T PRK02889 233 RVVANFKGSNSAPAWSPDGRTLAVALSRDG---------NSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSD 303 (427)
T ss_pred EEeecCCCCccceEECCCCCEEEEEEccCC---------CceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEec
Confidence 766533333467999999999999764321 12222211100 011 123469999999999987
Q ss_pred CCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEee
Q psy1288 267 KDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGF 346 (1012)
Q Consensus 267 ~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~ 346 (1012)
++. ..+||.++++++. .+.+..+. .........++++.|++....++..+|+++++.+|+. +.++.. .....+
T Consensus 304 ~~g-~~~Iy~~~~~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~-~~lt~~-~~~~~p 376 (427)
T PRK02889 304 RGG-APQIYRMPASGGA---AQRVTFTG-SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV-TALTDT-TRDESP 376 (427)
T ss_pred CCC-CcEEEEEECCCCc---eEEEecCC-CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe-EEccCC-CCccCc
Confidence 653 4689999987654 34454333 2122222345667888777666677899999977765 344433 223467
Q ss_pred cccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 347 SGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 347 ~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+|+|||+.|+|..+... -..|+.+++
T Consensus 377 ~~spdg~~l~~~~~~~g-~~~l~~~~~ 402 (427)
T PRK02889 377 SFAPNGRYILYATQQGG-RSVLAAVSS 402 (427)
T ss_pred eECCCCCEEEEEEecCC-CEEEEEEEC
Confidence 89999999999886543 356888888
No 27
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=3.6e-14 Score=165.10 Aligned_cols=215 Identities=16% Similarity=0.162 Sum_probs=149.7
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|++...+ ...||+.+..+++.++|++.. .....+.|||||++|+|+.+..|. .+||++
T Consensus 204 p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~~~~l~~~~-------~~~~~~~~SPDG~~La~~~~~~g~--~~I~~~ 272 (429)
T PRK03629 204 PAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFP-------RHNGAPAFSPDGSKLAFALSKTGS--LNLYVM 272 (429)
T ss_pred eEEcCCCCEEEEEEecCC--CcEEEEEECCCCCeEEccCCC-------CCcCCeEECCCCCEEEEEEcCCCC--cEEEEE
Confidence 455799999999886543 478999998888888887632 124578999999999999887664 379999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCC
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGP 259 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~ 259 (1012)
|+++|+.++++........+.|||||+.|+|++.+.. ..+++.....+ ......+.|+|||+
T Consensus 273 d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g---------~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~ 343 (429)
T PRK03629 273 DLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAG---------RPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK 343 (429)
T ss_pred ECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCC---------CceEEEEECCCCCeEEeecCCCCccCEEECCCCC
Confidence 9999998777655545678999999999999986521 11222211100 01122356999999
Q ss_pred EEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC
Q psy1288 260 QFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD 339 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 339 (1012)
.|++....+. ...|+.+|+++++ ++.|.... .........|++.|++...+.+...|+++++ +|+..+.++..
T Consensus 344 ~Ia~~~~~~g-~~~I~~~dl~~g~---~~~Lt~~~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~~ 416 (429)
T PRK03629 344 FMVMVSSNGG-QQHIAKQDLATGG---VQVLTDTF--LDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPAT 416 (429)
T ss_pred EEEEEEccCC-CceEEEEECCCCC---eEEeCCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECccC
Confidence 9999886543 5689999998765 44554322 1112223356677888877777788999999 56655666654
Q ss_pred ceEEEeecccc
Q psy1288 340 VGTIVGFSGKK 350 (1012)
Q Consensus 340 ~~~v~~~~~sp 350 (1012)
.+.+..++|+|
T Consensus 417 ~~~~~~p~Wsp 427 (429)
T PRK03629 417 DGQVKFPAWSP 427 (429)
T ss_pred CCCcCCcccCC
Confidence 55666777876
No 28
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=6.1e-14 Score=162.51 Aligned_cols=219 Identities=11% Similarity=0.029 Sum_probs=144.5
Q ss_pred CCCCeeeCCE--EEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEE
Q psy1288 108 YSSPQRQGDH--YFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSM 185 (1012)
Q Consensus 108 ~s~p~~dG~~--~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L 185 (1012)
.+.++|||++ ++|++.+. +.++||+++..+++.++|++.. .....++|||||++|||+.+..|.. +|
T Consensus 189 sP~wSPDG~~~~~~y~S~~~--g~~~I~~~~l~~g~~~~lt~~~-------g~~~~p~wSPDG~~Laf~s~~~g~~--di 257 (428)
T PRK01029 189 TPTWMHIGSGFPYLYVSYKL--GVPKIFLGSLENPAGKKILALQ-------GNQLMPTFSPRKKLLAFISDRYGNP--DL 257 (428)
T ss_pred cceEccCCCceEEEEEEccC--CCceEEEEECCCCCceEeecCC-------CCccceEECCCCCEEEEEECCCCCc--ce
Confidence 3456799987 66677765 3589999999999989998732 2345699999999999999877754 55
Q ss_pred EE--EECCC---Cceeceeecc-eeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEee--cc---------ccc
Q psy1288 186 HF--KDVAT---GKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT--VN---------VAP 248 (1012)
Q Consensus 186 ~v--~dl~t---g~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~--~~---------~~~ 248 (1012)
|+ +++++ |+.++++... .....++|||||+.|+|++.+.. ..+++.... .+ ...
T Consensus 258 ~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g---------~~~ly~~~~~~~g~~~~~lt~~~~~ 328 (428)
T PRK01029 258 FIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDG---------RPRIYIMQIDPEGQSPRLLTKKYRN 328 (428)
T ss_pred eEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCC---------CceEEEEECcccccceEEeccCCCC
Confidence 65 46664 4555555332 22367999999999999986421 112221110 00 012
Q ss_pred eeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecC
Q psy1288 249 ITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLA 328 (1012)
Q Consensus 249 i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~ 328 (1012)
...+.|||||++|+|.+..+. ..+|+.+|+++++ .+.|+.. +..........+++.|++....++...|++++++
T Consensus 329 ~~~p~wSPDG~~Laf~~~~~g-~~~I~v~dl~~g~---~~~Lt~~-~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 329 SSCPAWSPDGKKIAFCSVIKG-VRQICVYDLATGR---DYQLTTS-PENKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred ccceeECCCCCEEEEEEcCCC-CcEEEEEECCCCC---eEEccCC-CCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 234579999999999987543 5789999998776 3445433 2222222223466788887777777899999996
Q ss_pred CCceeeeecCCceEEEeecccccC
Q psy1288 329 SGKHLYTFPLDVGTIVGFSGKKKY 352 (1012)
Q Consensus 329 ~G~~~~~l~~~~~~v~~~~~spdg 352 (1012)
+++. +.++...+.+..++|+|-.
T Consensus 404 ~g~~-~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 404 TKKT-RKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred CCCE-EEeecCCCcccCceecCCC
Confidence 6654 4455444555567787643
No 29
>PRK10566 esterase; Provisional
Probab=99.60 E-value=4.5e-14 Score=152.59 Aligned_cols=231 Identities=18% Similarity=0.134 Sum_probs=140.1
Q ss_pred EEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCC-chhHHhhhhc--CCCcch
Q psy1288 416 IPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEY-GERWHDGGRL--LNKQNV 492 (1012)
Q Consensus 416 i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~-g~~~~~~~~~--~~~~~~ 492 (1012)
+....+.|.+ ..+++.|+||++||..+... .|. .....|+++||.|+++|+||.|.. +..-...... ......
T Consensus 12 ~~~~~~~p~~-~~~~~~p~vv~~HG~~~~~~--~~~-~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 12 IEVLHAFPAG-QRDTPLPTVFFYHGFTSSKL--VYS-YFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred cceEEEcCCC-CCCCCCCEEEEeCCCCcccc--hHH-HHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 3345555653 22356799999999754432 233 245667778999999999997632 1100000000 000123
Q ss_pred HhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEc-cCCCccccCcceeeeecccccccCcccc
Q psy1288 493 FDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQ-VGNPEISDCGRWLIVHTMKDCKNNMFHF 571 (1012)
Q Consensus 493 ~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~-~~~~~i~d~~~~~~~~~~~~~~~~~~~~ 571 (1012)
.+|+.++++++.+...+++++|+++|+|+||++++.++.+.|++..+++.. .+ ... .+
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~---~~~------------------~~ 146 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSG---YFT------------------SL 146 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcH---HHH------------------HH
Confidence 567778888988888889999999999999999999988878754333322 22 000 00
Q ss_pred cccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCC-CCCcEE
Q psy1288 572 CDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGK-QYPATL 650 (1012)
Q Consensus 572 ~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~-~~P~vL 650 (1012)
... ..+. ... .. ........+....+..+++...+. ++ +.| +|
T Consensus 147 ~~~-~~~~------~~~--------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~------~i~~~P-~L 190 (249)
T PRK10566 147 ART-LFPP------LIP--------------------ET--AAQQAEFNNIVAPLAEWEVTHQLE------QLADRP-LL 190 (249)
T ss_pred HHH-hccc------ccc--------------------cc--cccHHHHHHHHHHHhhcChhhhhh------hcCCCC-EE
Confidence 000 0000 000 00 000000001112233344433333 33 577 99
Q ss_pred EEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCC--cEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhC
Q psy1288 651 LMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTN--PLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 651 iihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~--~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l 720 (1012)
++||..|..|++.++.++.+++..+ +. .+++..+++++|++.. ..+.++++||.+++
T Consensus 191 ii~G~~D~~v~~~~~~~l~~~l~~~-------g~~~~~~~~~~~~~~H~~~~------~~~~~~~~fl~~~~ 249 (249)
T PRK10566 191 LWHGLADDVVPAAESLRLQQALRER-------GLDKNLTCLWEPGVRHRITP------EALDAGVAFFRQHL 249 (249)
T ss_pred EEEcCCCCcCCHHHHHHHHHHHHhc-------CCCcceEEEecCCCCCccCH------HHHHHHHHHHHhhC
Confidence 9999999999999999999999877 54 4889999999998742 45677889998764
No 30
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=3.2e-13 Score=157.77 Aligned_cols=235 Identities=14% Similarity=0.055 Sum_probs=158.9
Q ss_pred eeCCEEEEEEEcC--CCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 113 RQGDHYFFFHNTG--LQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 113 ~dG~~~yy~~~~~--~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
.-+.+++|++..+ +.....||+.+..+...++|+. +...+..++|||||++|+|+....+ ..+||++|+
T Consensus 165 ~f~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~-------~~~~v~~p~wSpDg~~la~~s~~~~--~~~l~~~dl 235 (433)
T PRK04922 165 AFWTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILR-------SAEPILSPAWSPDGKKLAYVSFERG--RSAIYVQDL 235 (433)
T ss_pred cccceEEEEEEeCCCCCceEEEEEECCCCCCceEeec-------CCCccccccCCCCCCEEEEEecCCC--CcEEEEEEC
Confidence 4466789987643 2335789999987777788876 3345778999999999999976655 358999999
Q ss_pred CCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc--------cc-eeeeeeecCCCEE
Q psy1288 191 ATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV--------AP-ITSQYITNEGPQF 261 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~--------~~-i~~~~~s~dg~~l 261 (1012)
++|+..+++........++|||||+.|+|+..... +..++....... .. ...+.|+|||++|
T Consensus 236 ~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g---------~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l 306 (433)
T PRK04922 236 ATGQRELVASFRGINGAPSFSPDGRRLALTLSRDG---------NPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSI 306 (433)
T ss_pred CCCCEEEeccCCCCccCceECCCCCEEEEEEeCCC---------CceEEEEECCCCCeEECccCCCCccceEECCCCCEE
Confidence 99987665433333457899999999999864321 112222111000 11 1234699999999
Q ss_pred EEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCce
Q psy1288 262 VFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVG 341 (1012)
Q Consensus 262 ~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~ 341 (1012)
+|.+++.+ ..+||.+++++++ .+.++... ..........+++.+++....++..+|+++++.+|+. +.++...
T Consensus 307 ~f~sd~~g-~~~iy~~dl~~g~---~~~lt~~g-~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~-~~Lt~~~- 379 (433)
T PRK04922 307 YFTSDRGG-RPQIYRVAASGGS---AERLTFQG-NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV-RTLTPGS- 379 (433)
T ss_pred EEEECCCC-CceEEEEECCCCC---eEEeecCC-CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCe-EECCCCC-
Confidence 99998754 4689999987765 45555332 2221222345667888776666667899999976664 3554332
Q ss_pred EEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 342 TIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 342 ~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
....++|+|||+.|+|..+.. .-..||.+++
T Consensus 380 ~~~~p~~spdG~~i~~~s~~~-g~~~L~~~~~ 410 (433)
T PRK04922 380 LDESPSFAPNGSMVLYATREG-GRGVLAAVST 410 (433)
T ss_pred CCCCceECCCCCEEEEEEecC-CceEEEEEEC
Confidence 233568999999999887653 3357999998
No 31
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=6.8e-14 Score=162.91 Aligned_cols=220 Identities=14% Similarity=0.158 Sum_probs=150.0
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|...+. +...||+.+..+++.+++++.. .....+.|||||++|+|+.+.+|. .+||++
T Consensus 201 p~wSPDG~~la~~s~~~--~~~~I~~~dl~~g~~~~l~~~~-------g~~~~~~~SPDG~~la~~~~~~g~--~~Iy~~ 269 (427)
T PRK02889 201 PAWSPDGTKLAYVSFES--KKPVVYVHDLATGRRRVVANFK-------GSNSAPAWSPDGRTLAVALSRDGN--SQIYTV 269 (427)
T ss_pred ceEcCCCCEEEEEEccC--CCcEEEEEECCCCCEEEeecCC-------CCccceEECCCCCEEEEEEccCCC--ceEEEE
Confidence 34569999999998754 3478999999888877776532 234579999999999999887764 589999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcc----cCCCCCceEEEEeeccccceeeeeeecCCCEEEEE
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK----KHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFK 264 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~----~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~ 264 (1012)
|+++++.++++........+.|||||+.|+|++++...... .+.+...++.+.. .....+.|||||+.|++.
T Consensus 270 d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g----~~~~~~~~SpDG~~Ia~~ 345 (427)
T PRK02889 270 NADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTG----SYNTSPRISPDGKLLAYI 345 (427)
T ss_pred ECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCC----CCcCceEECCCCCEEEEE
Confidence 99988877665544334678999999999998764211000 0011111111110 111234699999999998
Q ss_pred ECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEE
Q psy1288 265 TNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIV 344 (1012)
Q Consensus 265 tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~ 344 (1012)
++.+. .+.|+.+++.+++ .+.++..... .......+++.|++....++...|+++++ +|+....++.+.+.+.
T Consensus 346 s~~~g-~~~I~v~d~~~g~---~~~lt~~~~~--~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~ 418 (427)
T PRK02889 346 SRVGG-AFKLYVQDLATGQ---VTALTDTTRD--ESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVR 418 (427)
T ss_pred EccCC-cEEEEEEECCCCC---eEEccCCCCc--cCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCC
Confidence 86543 4689999987765 3445433211 11222346678888888888899999999 5766666766667677
Q ss_pred eecccc
Q psy1288 345 GFSGKK 350 (1012)
Q Consensus 345 ~~~~sp 350 (1012)
.++|+|
T Consensus 419 ~p~wsp 424 (427)
T PRK02889 419 EPSWGP 424 (427)
T ss_pred CCccCC
Confidence 778876
No 32
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=4.7e-13 Score=156.77 Aligned_cols=235 Identities=11% Similarity=0.066 Sum_probs=157.1
Q ss_pred eeCCEEEEEEEcC--CCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 113 RQGDHYFFFHNTG--LQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 113 ~dG~~~yy~~~~~--~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
....+++|+.... +.+...||..+..++..++++.. ...+..++|||||++|||+....+ ..+||++|+
T Consensus 160 ~f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~-------~~~~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l 230 (430)
T PRK00178 160 AFSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQS-------REPILSPRWSPDGKRIAYVSFEQK--RPRIFVQNL 230 (430)
T ss_pred cceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecC-------CCceeeeeECCCCCEEEEEEcCCC--CCEEEEEEC
Confidence 3556788877543 23456899999887777777762 235678999999999999987655 348999999
Q ss_pred CCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc--------cc-ceeeeeeecCCCEE
Q psy1288 191 ATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN--------VA-PITSQYITNEGPQF 261 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~--------~~-~i~~~~~s~dg~~l 261 (1012)
++|+..+++........++|||||+.|+|+..... ...++.....+ .. ....+.|+|||++|
T Consensus 231 ~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g---------~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i 301 (430)
T PRK00178 231 DTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG---------NPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTL 301 (430)
T ss_pred CCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC---------CceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEE
Confidence 99987665543333457999999999999864321 11222111100 01 11234699999999
Q ss_pred EEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCce
Q psy1288 262 VFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVG 341 (1012)
Q Consensus 262 ~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~ 341 (1012)
+|.++++. ..+||.+++.+++ ++.+...... ........+++.+++....++..+|+++++.+|+. +.++....
T Consensus 302 ~f~s~~~g-~~~iy~~d~~~g~---~~~lt~~~~~-~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~ 375 (430)
T PRK00178 302 YFTSDRGG-KPQIYKVNVNGGR---AERVTFVGNY-NARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILTDTSL 375 (430)
T ss_pred EEEECCCC-CceEEEEECCCCC---EEEeecCCCC-ccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEccCCCC
Confidence 99987653 4689999987765 4555433211 11112234667888877766777899999977664 44553322
Q ss_pred EEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 342 TIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 342 ~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
...++|+|||+.++|+..... -..|+.+++
T Consensus 376 -~~~p~~spdg~~i~~~~~~~g-~~~l~~~~~ 405 (430)
T PRK00178 376 -DESPSVAPNGTMLIYATRQQG-RGVLMLVSI 405 (430)
T ss_pred -CCCceECCCCCEEEEEEecCC-ceEEEEEEC
Confidence 225689999999998876432 346899988
No 33
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=8.1e-14 Score=163.21 Aligned_cols=214 Identities=15% Similarity=0.191 Sum_probs=149.6
Q ss_pred CCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE
Q psy1288 110 SPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD 189 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d 189 (1012)
.++|||++++|.+.+. +...||+.+..+++.++|+... .....+.|||||++|+|+.+..|. .+||++|
T Consensus 205 ~wSpDG~~la~~s~~~--~~~~l~~~~l~~g~~~~l~~~~-------g~~~~~~~SpDG~~la~~~~~~g~--~~Iy~~d 273 (430)
T PRK00178 205 RWSPDGKRIAYVSFEQ--KRPRIFVQNLDTGRREQITNFE-------GLNGAPAWSPDGSKLAFVLSKDGN--PEIYVMD 273 (430)
T ss_pred eECCCCCEEEEEEcCC--CCCEEEEEECCCCCEEEccCCC-------CCcCCeEECCCCCEEEEEEccCCC--ceEEEEE
Confidence 4569999999998764 3578999999888888876532 124579999999999999987764 5899999
Q ss_pred CCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc---------cceeeeeeecCCCE
Q psy1288 190 VATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV---------APITSQYITNEGPQ 260 (1012)
Q Consensus 190 l~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~---------~~i~~~~~s~dg~~ 260 (1012)
+++++.++++........+.|||||+.|+|++.+.. ..+++....... .....+.|+|||+.
T Consensus 274 ~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g---------~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~ 344 (430)
T PRK00178 274 LASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGG---------KPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKT 344 (430)
T ss_pred CCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCC---------CceEEEEECCCCCEEEeecCCCCccceEECCCCCE
Confidence 999988776654444577999999999999975421 112222211000 11113469999999
Q ss_pred EEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCc
Q psy1288 261 FVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDV 340 (1012)
Q Consensus 261 l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~ 340 (1012)
|++....+. .++|+.+|+.+++ .+.|.... ... ......+++.+++....++..+|+++++ +|...+.++.+.
T Consensus 345 i~~~~~~~~-~~~l~~~dl~tg~---~~~lt~~~-~~~-~p~~spdg~~i~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~ 417 (430)
T PRK00178 345 LVMVHRQDG-NFHVAAQDLQRGS---VRILTDTS-LDE-SPSVAPNGTMLIYATRQQGRGVLMLVSI-NGRVRLPLPTAQ 417 (430)
T ss_pred EEEEEccCC-ceEEEEEECCCCC---EEEccCCC-CCC-CceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECcCCC
Confidence 999886543 6789999998765 34444322 211 1223346678888888888899999999 565555666555
Q ss_pred eEEEeecccc
Q psy1288 341 GTIVGFSGKK 350 (1012)
Q Consensus 341 ~~v~~~~~sp 350 (1012)
+.+..++|+|
T Consensus 418 g~~~~p~ws~ 427 (430)
T PRK00178 418 GEVREPSWSP 427 (430)
T ss_pred CCcCCCccCC
Confidence 6666677775
No 34
>PLN02442 S-formylglutathione hydrolase
Probab=99.58 E-value=6.9e-14 Score=153.41 Aligned_cols=247 Identities=13% Similarity=0.034 Sum_probs=146.5
Q ss_pred ceEEEEEECC-CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCC-----
Q psy1288 402 ETKQVFYPSK-DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGE----- 475 (1012)
Q Consensus 402 ~~~~v~~~s~-DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~----- 475 (1012)
..+.+.+.|+ -|..+++.++.|+. ...++.|+|+++||..+.............+++..|++|+.+|..+.|.
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~ 95 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGE 95 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCc-ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCC
Confidence 3455566664 57789999999984 3456899999999976544322222333456677799999999764331
Q ss_pred -------CchhHHhhh-hcCCCcchHhH-HHHHH-HHHHHc-CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEcc
Q psy1288 476 -------YGERWHDGG-RLLNKQNVFDD-FQCAA-EYLIAS-GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQV 544 (1012)
Q Consensus 476 -------~g~~~~~~~-~~~~~~~~~~D-~~a~~-~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 544 (1012)
++..+.... ...+....+.+ +...+ .++... ...++++++|+|+|+||++++.++.++|++|+++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 175 (283)
T PLN02442 96 ADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFA 175 (283)
T ss_pred ccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEEC
Confidence 111111100 00010001111 21212 222222 23688999999999999999999999999999999988
Q ss_pred CCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHH
Q psy1288 545 GNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFE 624 (1012)
Q Consensus 545 ~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~ 624 (1012)
| +.+ +..++. + ...+ ...+|.+. +.
T Consensus 176 ~---~~~----------------------~~~~~~-------~--------~~~~-----------~~~~g~~~--~~-- 200 (283)
T PLN02442 176 P---IAN----------------------PINCPW-------G--------QKAF-----------TNYLGSDK--AD-- 200 (283)
T ss_pred C---ccC----------------------cccCch-------h--------hHHH-----------HHHcCCCh--hh--
Confidence 8 222 110000 0 0000 01123221 11
Q ss_pred HHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChH-HHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccc
Q psy1288 625 YLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPV-HSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTT 703 (1012)
Q Consensus 625 ~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~-~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~ 703 (1012)
+..++|...+... ...+.| +|++||..|..|+.. ++..++++++++ +.++.++++|+++|++.
T Consensus 201 -~~~~d~~~~~~~~---~~~~~p-vli~~G~~D~~v~~~~~s~~~~~~l~~~-------g~~~~~~~~pg~~H~~~---- 264 (283)
T PLN02442 201 -WEEYDATELVSKF---NDVSAT-ILIDQGEADKFLKEQLLPENFEEACKEA-------GAPVTLRLQPGYDHSYF---- 264 (283)
T ss_pred -HHHcChhhhhhhc---cccCCC-EEEEECCCCccccccccHHHHHHHHHHc-------CCCeEEEEeCCCCccHH----
Confidence 3334444322210 135566 999999999999874 578899999988 88999999999999864
Q ss_pred cchhhhhHHHHHHHHhC
Q psy1288 704 KQFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 704 ~~~~~~~~~~~fl~~~l 720 (1012)
.....+.+.+.|..+++
T Consensus 265 ~~~~~i~~~~~~~~~~~ 281 (283)
T PLN02442 265 FIATFIDDHINHHAQAL 281 (283)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 12233334445555443
No 35
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.4e-13 Score=160.74 Aligned_cols=215 Identities=15% Similarity=0.176 Sum_probs=147.6
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|.+... +...||+.+..++..+++++.. + ....++|||||++|+|+.+..|. .+||++
T Consensus 209 p~wSpDg~~la~~s~~~--~~~~l~~~dl~~g~~~~l~~~~-----g--~~~~~~~SpDG~~l~~~~s~~g~--~~Iy~~ 277 (433)
T PRK04922 209 PAWSPDGKKLAYVSFER--GRSAIYVQDLATGQRELVASFR-----G--INGAPSFSPDGRRLALTLSRDGN--PEIYVM 277 (433)
T ss_pred ccCCCCCCEEEEEecCC--CCcEEEEEECCCCCEEEeccCC-----C--CccCceECCCCCEEEEEEeCCCC--ceEEEE
Confidence 34569999999998754 3578999999888878877632 1 24578999999999999988774 489999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCC
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGP 259 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~ 259 (1012)
|+++|+.++++........++|||||+.|+|++++... .+++...... ......+.|||||+
T Consensus 278 d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~---------~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~ 348 (433)
T PRK04922 278 DLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGR---------PQIYRVAASGGSAERLTFQGNYNARASVSPDGK 348 (433)
T ss_pred ECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCC---------ceEEEEECCCCCeEEeecCCCCccCEEECCCCC
Confidence 99999987766544334679999999999999865311 1222211100 01111346999999
Q ss_pred EEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC
Q psy1288 260 QFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD 339 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 339 (1012)
.|++.+.. ...+.|+.+++.+++ .+.|.... .. .......+++.+++.....+..+|+++++ +|...+.++.+
T Consensus 349 ~Ia~~~~~-~~~~~I~v~d~~~g~---~~~Lt~~~-~~-~~p~~spdG~~i~~~s~~~g~~~L~~~~~-~g~~~~~l~~~ 421 (433)
T PRK04922 349 KIAMVHGS-GGQYRIAVMDLSTGS---VRTLTPGS-LD-ESPSFAPNGSMVLYATREGGRGVLAAVST-DGRVRQRLVSA 421 (433)
T ss_pred EEEEEECC-CCceeEEEEECCCCC---eEECCCCC-CC-CCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEcccC
Confidence 99998764 345789999987665 34444322 11 11123346677888877778889999999 56555666655
Q ss_pred ceEEEeecccc
Q psy1288 340 VGTIVGFSGKK 350 (1012)
Q Consensus 340 ~~~v~~~~~sp 350 (1012)
.+.+..++|+|
T Consensus 422 ~g~~~~p~wsp 432 (433)
T PRK04922 422 DGEVREPAWSP 432 (433)
T ss_pred CCCCCCCccCC
Confidence 55555667765
No 36
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.56 E-value=1.9e-13 Score=159.97 Aligned_cols=212 Identities=11% Similarity=0.070 Sum_probs=143.2
Q ss_pred CCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE
Q psy1288 110 SPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD 189 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d 189 (1012)
.++|||++++|.+...+ ...||+.+..++..+++++.. ..+..+.|||||++|+|+.+.+|. .+||++|
T Consensus 208 ~wSpDG~~lay~s~~~g--~~~i~~~dl~~g~~~~l~~~~-------g~~~~~~~SPDG~~la~~~~~~g~--~~Iy~~d 276 (435)
T PRK05137 208 RFSPNRQEITYMSYANG--RPRVYLLDLETGQRELVGNFP-------GMTFAPRFSPDGRKVVMSLSQGGN--TDIYTMD 276 (435)
T ss_pred EECCCCCEEEEEEecCC--CCEEEEEECCCCcEEEeecCC-------CcccCcEECCCCCEEEEEEecCCC--ceEEEEE
Confidence 34699999999987653 478999999888888887622 235688999999999999887764 5899999
Q ss_pred CCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCCE
Q psy1288 190 VATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGPQ 260 (1012)
Q Consensus 190 l~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~~ 260 (1012)
+++++.++++........+.|||||+.|+|++.+.. ..+++.....+ ......+.|+|||+.
T Consensus 277 ~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g---------~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ 347 (435)
T PRK05137 277 LRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSG---------SPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDL 347 (435)
T ss_pred CCCCceEEccCCCCccCceeEcCCCCEEEEEECCCC---------CCeEEEEECCCCCeEEeecCCCcccCeEECCCCCE
Confidence 999998777655444567999999999999985421 11222111100 011223569999999
Q ss_pred EEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeE-EecCCEEEEEEEcCce---EEEEEEecCCCceeeee
Q psy1288 261 FVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWAT-CVANDKLILSYIHHVK---NVMHLHDLASGKHLYTF 336 (1012)
Q Consensus 261 l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~---~~l~~~dl~~G~~~~~l 336 (1012)
|++..... ..++|+.+++++.. .+ ++.... . .+... ..+++.|++.....+. .+|++++++++. .+.+
T Consensus 348 ia~~~~~~-~~~~i~~~d~~~~~---~~-~lt~~~-~-~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~-~~~l 419 (435)
T PRK05137 348 IAFTKQGG-GQFSIGVMKPDGSG---ER-ILTSGF-L-VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRN-EREV 419 (435)
T ss_pred EEEEEcCC-CceEEEEEECCCCc---eE-eccCCC-C-CCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCc-eEEc
Confidence 99988543 35789999986544 23 333321 1 22222 3466777777665554 689999995444 3555
Q ss_pred cCCceEEEeecccc
Q psy1288 337 PLDVGTIVGFSGKK 350 (1012)
Q Consensus 337 ~~~~~~v~~~~~sp 350 (1012)
+. .+.+..++|+|
T Consensus 420 ~~-~~~~~~p~Wsp 432 (435)
T PRK05137 420 PT-PGDASDPAWSP 432 (435)
T ss_pred cC-CCCccCcccCC
Confidence 54 33455677775
No 37
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.55 E-value=1.8e-13 Score=149.81 Aligned_cols=242 Identities=15% Similarity=0.120 Sum_probs=147.4
Q ss_pred EEEEECC-CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcC--CCCCCCc--hh
Q psy1288 405 QVFYPSK-DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNI--RGGGEYG--ER 479 (1012)
Q Consensus 405 ~v~~~s~-DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~--RG~g~~g--~~ 479 (1012)
...+.|. -|..+.+.++.|++.. .++.|+|+++||.........+......++++.|++|+.+|. ||.+..+ ..
T Consensus 15 ~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~ 93 (275)
T TIGR02821 15 FYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDA 93 (275)
T ss_pred EEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCccc
Confidence 3444443 4677889999998643 346899999999865443322223334555667999999997 6654322 12
Q ss_pred HHhh---------hhcCC--CcchHhHHHHHHHHHHHc-CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCC
Q psy1288 480 WHDG---------GRLLN--KQNVFDDFQCAAEYLIAS-GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNP 547 (1012)
Q Consensus 480 ~~~~---------~~~~~--~~~~~~D~~a~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 547 (1012)
|... ....+ .......+...+..+++. -.+++++++++|+|+||++++.++.++|++|+++++.+|
T Consensus 94 w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~-- 171 (275)
T TIGR02821 94 WDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAP-- 171 (275)
T ss_pred ccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECC--
Confidence 2110 00000 011122333344444444 337889999999999999999999999999999999888
Q ss_pred ccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHH
Q psy1288 548 EISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLL 627 (1012)
Q Consensus 548 ~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~ 627 (1012)
+.+. ... +. ..+.+ ...++.+. . .+.
T Consensus 172 -~~~~----------------------~~~---------~~------~~~~~-----------~~~l~~~~--~---~~~ 197 (275)
T TIGR02821 172 -IVAP----------------------SRC---------PW------GQKAF-----------SAYLGADE--A---AWR 197 (275)
T ss_pred -ccCc----------------------ccC---------cc------hHHHH-----------HHHhcccc--c---chh
Confidence 2210 000 00 00000 00111111 0 122
Q ss_pred cCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCCh-HHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccch
Q psy1288 628 GYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSP-VHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQF 706 (1012)
Q Consensus 628 ~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~-~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~ 706 (1012)
.++|...+.. ....|++++.||..|+.++. .++..+.++|+++ +.++++..+|+.+|+|... .
T Consensus 198 ~~~~~~~~~~-----~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~-------g~~v~~~~~~g~~H~f~~~----~ 261 (275)
T TIGR02821 198 SYDASLLVAD-----GGRHSTILIDQGTADQFLDEQLRPDAFEQACRAA-------GQALTLRRQAGYDHSYYFI----A 261 (275)
T ss_pred hcchHHHHhh-----cccCCCeeEeecCCCcccCccccHHHHHHHHHHc-------CCCeEEEEeCCCCccchhH----H
Confidence 2344333220 12345599999999999999 6888999999998 8999999999999998542 2
Q ss_pred hhhhHHHHHHHHh
Q psy1288 707 PLTIPVIYFYLTS 719 (1012)
Q Consensus 707 ~~~~~~~~fl~~~ 719 (1012)
..+.+.+.|..++
T Consensus 262 ~~~~~~~~~~~~~ 274 (275)
T TIGR02821 262 SFIADHLRHHAER 274 (275)
T ss_pred HhHHHHHHHHHhh
Confidence 3445566666554
No 38
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.52 E-value=2e-12 Score=146.03 Aligned_cols=143 Identities=15% Similarity=0.085 Sum_probs=100.2
Q ss_pred CCCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCC
Q psy1288 396 FDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGE 475 (1012)
Q Consensus 396 ~~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~ 475 (1012)
..+..+..+...+.+.||.+|.+..+.|.+. ....++||++||..... ...|.. ....|.++||.|+.+|+||.|.
T Consensus 25 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~-~~~~~~-~~~~L~~~Gy~V~~~D~rGhG~ 100 (330)
T PLN02298 25 YALKGIKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDI-SWTFQS-TAIFLAQMGFACFALDLEGHGR 100 (330)
T ss_pred hhccCCccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCc-ceehhH-HHHHHHhCCCEEEEecCCCCCC
Confidence 3445556667778889999999988877542 23568999999974322 222222 2344666799999999999885
Q ss_pred CchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 476 YGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 476 ~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.... .+.........+|+.++++++......+..+++++|+|+||.+++.++.++|++++++|+..+
T Consensus 101 S~~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~ 167 (330)
T PLN02298 101 SEGL---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAP 167 (330)
T ss_pred CCCc---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecc
Confidence 4311 010111123457888888888765434445799999999999999999899999999998877
No 39
>PRK10162 acetyl esterase; Provisional
Probab=99.51 E-value=1.4e-12 Score=145.67 Aligned_cols=246 Identities=15% Similarity=0.134 Sum_probs=151.2
Q ss_pred ceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCC-CcChhHHHHHHh-CCeEEEEEcCCCCCCCchh
Q psy1288 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQP-GFSVTKIVFLRD-FNGIYAIPNIRGGGEYGER 479 (1012)
Q Consensus 402 ~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~ 479 (1012)
..+.+.+.+++| .|++.++.|.. ...|+||++|||....... .+.. ....++. .|+.|+.+|||...+.
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~-~~~~la~~~g~~Vv~vdYrlape~--- 126 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDR-IMRLLASYSGCTVIGIDYTLSPEA--- 126 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhH-HHHHHHHHcCCEEEEecCCCCCCC---
Confidence 467777888888 59999999863 3469999999986443332 2333 2344443 5999999999976542
Q ss_pred HHhhhhcCCCcchHhHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHhhC------CCceeEEEEccCCCccc
Q psy1288 480 WHDGGRLLNKQNVFDDFQCAAEYLIASG---YTQSSRLAIQGGSNGGLLTAACINQR------PDLFGAAIVQVGNPEIS 550 (1012)
Q Consensus 480 ~~~~~~~~~~~~~~~D~~a~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~~i~ 550 (1012)
.....++|+.++++|+.++. .+++++|+|+|+|+||.+++.++.+. +..+.+.+..+| +.
T Consensus 127 --------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p---~~ 195 (318)
T PRK10162 127 --------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYG---LY 195 (318)
T ss_pred --------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECC---cc
Confidence 12335789999999998652 36899999999999999998877542 245677788777 22
Q ss_pred cCcceeeeecccccccCcccccccCCCCccc-ccCCC-CcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHc
Q psy1288 551 DCGRWLIVHTMKDCKNNMFHFCDLDTIPDRK-IEGKL-PLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLG 628 (1012)
Q Consensus 551 d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~-~~~~~-plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~ 628 (1012)
+ +...+... ..... .|+.. ++..+ |....+++.+ .
T Consensus 196 ~----------------------~~~~~s~~~~~~~~~~l~~~-----~~~~~--------~~~y~~~~~~--------~ 232 (318)
T PRK10162 196 G----------------------LRDSVSRRLLGGVWDGLTQQ-----DLQMY--------EEAYLSNDAD--------R 232 (318)
T ss_pred C----------------------CCCChhHHHhCCCccccCHH-----HHHHH--------HHHhCCCccc--------c
Confidence 2 10000000 00000 01110 00000 0000111111 1
Q ss_pred CCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc---ccc
Q psy1288 629 YSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT---TKQ 705 (1012)
Q Consensus 629 ~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~---~~~ 705 (1012)
.+|+...... ++ ....|++++++|+.|+.+ .++..+..+|+++ |.+++++.+++..|+|.... ...
T Consensus 233 ~~p~~~p~~~-~l-~~~lPp~~i~~g~~D~L~--de~~~~~~~L~~a-------Gv~v~~~~~~g~~H~f~~~~~~~~~a 301 (318)
T PRK10162 233 ESPYYCLFNN-DL-TRDVPPCFIAGAEFDPLL--DDSRLLYQTLAAH-------QQPCEFKLYPGTLHAFLHYSRMMDTA 301 (318)
T ss_pred CCcccCcchh-hh-hcCCCCeEEEecCCCcCc--ChHHHHHHHHHHc-------CCCEEEEEECCCceehhhccCchHHH
Confidence 1232211000 00 135678999999999876 4788999999999 99999999999999985432 122
Q ss_pred hhhhhHHHHHHHHhCC
Q psy1288 706 FPLTIPVIYFYLTSGP 721 (1012)
Q Consensus 706 ~~~~~~~~~fl~~~l~ 721 (1012)
.+.+.++.+|+.++++
T Consensus 302 ~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 302 DDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 3445566678877654
No 40
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=1.3e-12 Score=138.35 Aligned_cols=215 Identities=19% Similarity=0.220 Sum_probs=156.1
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhH----
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERW---- 480 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~---- 480 (1012)
.+.++++| ..+.+++.+|++ .++.|.||.+|+-++... .-......++..||+|+++|.-+..+.....
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~---~~~~P~VIv~hei~Gl~~---~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~ 76 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG---AGGFPGVIVLHEIFGLNP---HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEP 76 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc---CCCCCEEEEEecccCCch---HHHHHHHHHHhCCcEEEechhhccCCCCCcccccH
Confidence 45566776 789999999987 344599999999766442 3334556778889999999986533221111
Q ss_pred --Hhhh--hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCccee
Q psy1288 481 --HDGG--RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWL 556 (1012)
Q Consensus 481 --~~~~--~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~ 556 (1012)
...+ ..........|+.++++||..++.+++.+|+++|.|+||.+++.++.+.| .++++++..|
T Consensus 77 ~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg----------- 144 (236)
T COG0412 77 AELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYG----------- 144 (236)
T ss_pred HHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecC-----------
Confidence 1111 01111456789999999999999899999999999999999999998866 7899999888
Q ss_pred eeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCC
Q psy1288 557 IVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQ 636 (1012)
Q Consensus 557 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~ 636 (1012)
.. + . ..+ ...
T Consensus 145 --------------~~---------------~-------~------------------~~~---------------~~~- 154 (236)
T COG0412 145 --------------GL---------------I-------A------------------DDT---------------ADA- 154 (236)
T ss_pred --------------CC---------------C-------C------------------Ccc---------------ccc-
Confidence 00 0 0 000 001
Q ss_pred CCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc------cc---chh
Q psy1288 637 GPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT------TK---QFP 707 (1012)
Q Consensus 637 ~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~------~~---~~~ 707 (1012)
.+.++| +|+.+|+.|+.++......+.+.+..+ +..+.+.+|+++.|+|.... .+ ...
T Consensus 155 -----~~~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~-------~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~ 221 (236)
T COG0412 155 -----PKIKVP-VLLHLAGEDPYIPAADVDALAAALEDA-------GVKVDLEIYPGAGHGFANDRADYHPGYDAAAAED 221 (236)
T ss_pred -----ccccCc-EEEEecccCCCCChhHHHHHHHHHHhc-------CCCeeEEEeCCCccccccCCCcccccCCHHHHHH
Confidence 157888 999999999999999988888888887 67899999999999997542 11 135
Q ss_pred hhhHHHHHHHHhCC
Q psy1288 708 LTIPVIYFYLTSGP 721 (1012)
Q Consensus 708 ~~~~~~~fl~~~l~ 721 (1012)
.+.++++|+.+.+.
T Consensus 222 a~~~~~~ff~~~~~ 235 (236)
T COG0412 222 AWQRVLAFFKRLLG 235 (236)
T ss_pred HHHHHHHHHHHhcc
Confidence 56777888887754
No 41
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.50 E-value=1.8e-13 Score=144.54 Aligned_cols=205 Identities=19% Similarity=0.222 Sum_probs=134.3
Q ss_pred EEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCC-CchhHHh--hhh----cCC
Q psy1288 416 IPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGE-YGERWHD--GGR----LLN 488 (1012)
Q Consensus 416 i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~-~g~~~~~--~~~----~~~ 488 (1012)
+.+++..|++. ++.|.||.+|+.++.. .+.......|+++||.|+++|+-++.. .-....+ ... ...
T Consensus 1 ~~ay~~~P~~~---~~~~~Vvv~~d~~G~~---~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG---GPRPAVVVIHDIFGLN---PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS---SSEEEEEEE-BTTBS----HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC---CCCCEEEEEcCCCCCc---hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 45788888872 6889999999977544 222234566778899999999866554 1111100 000 001
Q ss_pred CcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCc
Q psy1288 489 KQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNM 568 (1012)
Q Consensus 489 ~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~ 568 (1012)
......|+.+++++|.++...+.++|+++|.|+||.+++.++.+. ..+++++...| -.
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg---~~------------------ 132 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG---GS------------------ 132 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES----SS------------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC---CC------------------
Confidence 123457888999999999878899999999999999999888775 57888888766 00
Q ss_pred ccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCc
Q psy1288 569 FHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPA 648 (1012)
Q Consensus 569 ~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~ 648 (1012)
+.. . +.... .+++.|
T Consensus 133 ------------------~~~-----------------------------~-----------~~~~~------~~~~~P- 147 (218)
T PF01738_consen 133 ------------------PPP-----------------------------P-----------PLEDA------PKIKAP- 147 (218)
T ss_dssp ------------------SGG-----------------------------G-----------HHHHG------GG--S--
T ss_pred ------------------CCC-----------------------------c-----------chhhh------cccCCC-
Confidence 000 0 00001 135677
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc------hhhhhHHHHHHHHhC
Q psy1288 649 TLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ------FPLTIPVIYFYLTSG 720 (1012)
Q Consensus 649 vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~------~~~~~~~~~fl~~~l 720 (1012)
+|+++|+.|+.++.....++.+.|+++ +.++++++||+++|||....... .+.+..+++||.++|
T Consensus 148 ~l~~~g~~D~~~~~~~~~~~~~~l~~~-------~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 148 VLILFGENDPFFPPEEVEALEEALKAA-------GVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp EEEEEETT-TTS-HHHHHHHHHHHHCT-------TTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC--
T ss_pred EeecCccCCCCCChHHHHHHHHHHHhc-------CCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999988899999888 88999999999999997654331 345667778887664
No 42
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.49 E-value=5.1e-13 Score=135.50 Aligned_cols=251 Identities=19% Similarity=0.191 Sum_probs=162.4
Q ss_pred CCCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCC
Q psy1288 397 DPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEY 476 (1012)
Q Consensus 397 ~~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~ 476 (1012)
......+-.++|++.+|.+|.+|++.|+.- .++.|+||..||-.+... +-..++.|.. .||+|+.+|.||.++.
T Consensus 50 ~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~g---~~~~~l~wa~-~Gyavf~MdvRGQg~~ 123 (321)
T COG3458 50 TLPRVEVYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRGG---EWHDMLHWAV-AGYAVFVMDVRGQGSS 123 (321)
T ss_pred cCCceEEEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCCC---Cccccccccc-cceeEEEEecccCCCc
Confidence 334556788999999999999999999863 388999999998544332 2223345555 5999999999998866
Q ss_pred chh------------HHhhhhcC-----CCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeE
Q psy1288 477 GER------------WHDGGRLL-----NKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGA 539 (1012)
Q Consensus 477 g~~------------~~~~~~~~-----~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a 539 (1012)
..+ |...+..+ .....+.|...+++.+.....+|..||++.|+|.||.++++++.-.| ++++
T Consensus 124 ~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~ 202 (321)
T COG3458 124 SQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKA 202 (321)
T ss_pred cccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhc
Confidence 220 11111111 11245789999999999999999999999999999999998887654 7789
Q ss_pred EEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCC
Q psy1288 540 AIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPAN 619 (1012)
Q Consensus 540 ~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~ 619 (1012)
+++.+| -.+|+..+. .++......++....+. . .|..
T Consensus 203 ~~~~~P--fl~df~r~i----------------------------~~~~~~~ydei~~y~k~------------h-~~~e 239 (321)
T COG3458 203 VVADYP--FLSDFPRAI----------------------------ELATEGPYDEIQTYFKR------------H-DPKE 239 (321)
T ss_pred cccccc--ccccchhhe----------------------------eecccCcHHHHHHHHHh------------c-CchH
Confidence 998888 222322221 01111110011111111 1 1222
Q ss_pred hHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCC
Q psy1288 620 SSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 699 (1012)
Q Consensus 620 ~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~ 699 (1012)
.+.++.+.-++-.+.+. .+|.| +|+..|..|+.|||.-.+..++++.. ...+.+||--+|..+
T Consensus 240 ~~v~~TL~yfD~~n~A~------RiK~p-vL~svgL~D~vcpPstqFA~yN~l~~----------~K~i~iy~~~aHe~~ 302 (321)
T COG3458 240 AEVFETLSYFDIVNLAA------RIKVP-VLMSVGLMDPVCPPSTQFAAYNALTT----------SKTIEIYPYFAHEGG 302 (321)
T ss_pred HHHHHHHhhhhhhhHHH------hhccc-eEEeecccCCCCCChhhHHHhhcccC----------CceEEEeeccccccC
Confidence 23333333333333333 68899 99999999999999988877777653 345677777779877
Q ss_pred CccccchhhhhHHHHHHHHh
Q psy1288 700 KPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 700 ~~~~~~~~~~~~~~~fl~~~ 719 (1012)
..+.. .+.+.|+...
T Consensus 303 p~~~~-----~~~~~~l~~l 317 (321)
T COG3458 303 PGFQS-----RQQVHFLKIL 317 (321)
T ss_pred cchhH-----HHHHHHHHhh
Confidence 65543 2244566543
No 43
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.48 E-value=3.6e-13 Score=148.59 Aligned_cols=250 Identities=20% Similarity=0.225 Sum_probs=150.1
Q ss_pred CCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCch
Q psy1288 399 SLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGE 478 (1012)
Q Consensus 399 ~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 478 (1012)
....+..|.+.+.+|.+|.++++.|++. .++.|+||.+||..+... .+. ....| +.+|++|+.+|.||.++...
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~~--~~~-~~~~~-a~~G~~vl~~d~rGqg~~~~ 125 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRSG--DPF-DLLPW-AAAGYAVLAMDVRGQGGRSP 125 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--GG--GHH-HHHHH-HHTT-EEEEE--TTTSSSS-
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCCC--Ccc-ccccc-ccCCeEEEEecCCCCCCCCC
Confidence 3456788999999999999999999852 588999999999654321 111 12334 45799999999999884433
Q ss_pred hHHh-----------hhhcCCC-----cchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEE
Q psy1288 479 RWHD-----------GGRLLNK-----QNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIV 542 (1012)
Q Consensus 479 ~~~~-----------~~~~~~~-----~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 542 (1012)
.... .+..... ...+.|...++++|...+.+|+++|++.|.|.||.+++.++.-.+ +++++++
T Consensus 126 d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~ 204 (320)
T PF05448_consen 126 DYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAA 204 (320)
T ss_dssp B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEE
T ss_pred CccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEe
Confidence 2111 1111101 134679999999999999999999999999999999999988765 6888888
Q ss_pred ccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCC---CC
Q psy1288 543 QVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSP---AN 619 (1012)
Q Consensus 543 ~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p---~~ 619 (1012)
.+| -.+|+...+ .+.. ...|... +..++ .+.++ ..
T Consensus 205 ~vP--~l~d~~~~~-------------------~~~~----~~~~y~~----~~~~~-------------~~~d~~~~~~ 242 (320)
T PF05448_consen 205 DVP--FLCDFRRAL-------------------ELRA----DEGPYPE----IRRYF-------------RWRDPHHERE 242 (320)
T ss_dssp ESE--SSSSHHHHH-------------------HHT------STTTHH----HHHHH-------------HHHSCTHCHH
T ss_pred cCC--Cccchhhhh-------------------hcCC----ccccHHH----HHHHH-------------hccCCCcccH
Confidence 877 111110000 0000 0000000 11111 11111 12
Q ss_pred hHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCC
Q psy1288 620 SSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 699 (1012)
Q Consensus 620 ~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~ 699 (1012)
++.++.+.-++..+.++ .+++| +|+..|..|+.||+...+..+.++. .+..+.+||..+|...
T Consensus 243 ~~v~~~L~Y~D~~nfA~------ri~~p-vl~~~gl~D~~cPP~t~fA~yN~i~----------~~K~l~vyp~~~He~~ 305 (320)
T PF05448_consen 243 PEVFETLSYFDAVNFAR------RIKCP-VLFSVGLQDPVCPPSTQFAAYNAIP----------GPKELVVYPEYGHEYG 305 (320)
T ss_dssp HHHHHHHHTT-HHHHGG------G--SE-EEEEEETT-SSS-HHHHHHHHCC------------SSEEEEEETT--SSTT
T ss_pred HHHHHHHhhhhHHHHHH------HcCCC-EEEEEecCCCCCCchhHHHHHhccC----------CCeeEEeccCcCCCch
Confidence 34455566666666655 78999 9999999999999999888777764 3478999999999876
Q ss_pred CccccchhhhhHHHHHHHHh
Q psy1288 700 KPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 700 ~~~~~~~~~~~~~~~fl~~~ 719 (1012)
... .....+.||.++
T Consensus 306 ~~~-----~~~~~~~~l~~~ 320 (320)
T PF05448_consen 306 PEF-----QEDKQLNFLKEH 320 (320)
T ss_dssp HHH-----HHHHHHHHHHH-
T ss_pred hhH-----HHHHHHHHHhcC
Confidence 533 123456788764
No 44
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.47 E-value=9.1e-13 Score=138.46 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=90.3
Q ss_pred EEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchh--HHhhhhcCCCcchHhHH
Q psy1288 419 FILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGER--WHDGGRLLNKQNVFDDF 496 (1012)
Q Consensus 419 ~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~--~~~~~~~~~~~~~~~D~ 496 (1012)
+++.|++. .++.|+||++||+.+..........+..++.+.|++|+.+|.+|++..+.. |..............|+
T Consensus 2 ~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (212)
T TIGR01840 2 YVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESL 79 (212)
T ss_pred EEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHH
Confidence 57778764 467899999999865433221111234556667999999999997654332 22221111223345678
Q ss_pred HHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 497 QCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 497 ~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
...++++.++..+++++|+++|+|+||.+++.++.++|++|++++..++
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g 128 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAG 128 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecC
Confidence 8888888887778999999999999999999999999999999888877
No 45
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.47 E-value=4.9e-12 Score=145.71 Aligned_cols=133 Identities=19% Similarity=0.143 Sum_probs=97.3
Q ss_pred CceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhH
Q psy1288 401 FETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERW 480 (1012)
Q Consensus 401 ~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 480 (1012)
+..+.+.++..||..|+++++.|+. +++.|+||+.|| ........|.. ....++.+||.|+++|.||.|.... +
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~gG-~~~~~~~~~~~-~~~~La~~Gy~vl~~D~pG~G~s~~-~ 239 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVCGG-LDSLQTDYYRL-FRDYLAPRGIAMLTIDMPSVGFSSK-W 239 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEeCC-cccchhhhHHH-HHHHHHhCCCEEEEECCCCCCCCCC-C
Confidence 4578899999999899999999873 467888876554 33222222322 3456667899999999999775421 1
Q ss_pred HhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 481 HDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 481 ~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
. ..........++++++...+.+|+++|+++|+|+||++++.++..+|++++++|+..+
T Consensus 240 ~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~ 298 (414)
T PRK05077 240 K------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGP 298 (414)
T ss_pred C------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECC
Confidence 0 0011112234678899888889999999999999999999999888989999998877
No 46
>KOG1455|consensus
Probab=99.45 E-value=3.6e-12 Score=132.83 Aligned_cols=260 Identities=14% Similarity=0.121 Sum_probs=158.6
Q ss_pred EEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhh
Q psy1288 404 KQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDG 483 (1012)
Q Consensus 404 ~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 483 (1012)
..-.+.+++|.++....+.|... ..++-+|+++||....+ ...|... ...|+..||.|+..|++|+|...+. .
T Consensus 28 ~~~~~~n~rG~~lft~~W~p~~~--~~pr~lv~~~HG~g~~~-s~~~~~~-a~~l~~~g~~v~a~D~~GhG~SdGl---~ 100 (313)
T KOG1455|consen 28 SESFFTNPRGAKLFTQSWLPLSG--TEPRGLVFLCHGYGEHS-SWRYQST-AKRLAKSGFAVYAIDYEGHGRSDGL---H 100 (313)
T ss_pred eeeeEEcCCCCEeEEEecccCCC--CCCceEEEEEcCCcccc-hhhHHHH-HHHHHhCCCeEEEeeccCCCcCCCC---c
Confidence 34456788999998888888542 25667899999965433 2334333 3455567999999999998854211 1
Q ss_pred hhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccc
Q psy1288 484 GRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKD 563 (1012)
Q Consensus 484 ~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~ 563 (1012)
+........++|+.+-.+....+..-..-..+++|+||||.+++.++.+.|+.+..+|..+|
T Consensus 101 ~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaP------------------ 162 (313)
T KOG1455|consen 101 AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAP------------------ 162 (313)
T ss_pred ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeec------------------
Confidence 11111123345666555555555544445678999999999999999989999999999988
Q ss_pred cccCccccccc-CCCCcccccCCCCcchhhhhhhhhhhccccccccccccc----cCC--CCChHHHHHHHcCCcccCCC
Q psy1288 564 CKNNMFHFCDL-DTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESD----YGS--PANSSQFEYLLGYSPLHNIQ 636 (1012)
Q Consensus 564 ~~~~~~~~~dl-~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~----~g~--p~~~~~~~~~~~~sP~~~~~ 636 (1012)
++.+ ..+++. |+... ++-.+.. .-+.|... ... ..+++. ......+|+-...
T Consensus 163 -------mc~i~~~~kp~------p~v~~---~l~~l~~----liP~wk~vp~~d~~~~~~kdp~~-r~~~~~npl~y~g 221 (313)
T KOG1455|consen 163 -------MCKISEDTKPH------PPVIS---ILTLLSK----LIPTWKIVPTKDIIDVAFKDPEK-RKILRSDPLCYTG 221 (313)
T ss_pred -------ccccCCccCCC------cHHHH---HHHHHHH----hCCceeecCCccccccccCCHHH-HHHhhcCCceecC
Confidence 3331 122111 11000 0000000 00011100 000 012221 2233334443322
Q ss_pred CCC----------------cccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCC-
Q psy1288 637 GPD----------------ELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG- 699 (1012)
Q Consensus 637 ~p~----------------~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~- 699 (1012)
.|+ .+..+..| +|++||+.|..+.+..+.++++..... ...++.||+.-|+..
T Consensus 222 ~pRl~T~~ElLr~~~~le~~l~~vtvP-flilHG~dD~VTDp~~Sk~Lye~A~S~---------DKTlKlYpGm~H~Ll~ 291 (313)
T KOG1455|consen 222 KPRLKTAYELLRVTADLEKNLNEVTVP-FLILHGTDDKVTDPKVSKELYEKASSS---------DKTLKLYPGMWHSLLS 291 (313)
T ss_pred CccHHHHHHHHHHHHHHHHhccccccc-EEEEecCCCcccCcHHHHHHHHhccCC---------CCceeccccHHHHhhc
Confidence 222 23467888 999999999999999999988875543 668999999999975
Q ss_pred -CccccchhhhhHHHHHHHHh
Q psy1288 700 -KPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 700 -~~~~~~~~~~~~~~~fl~~~ 719 (1012)
+..........|+++||+++
T Consensus 292 gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 292 GEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCCchhHHHHHHHHHHHHHhc
Confidence 44444556778999999875
No 47
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=4e-11 Score=139.92 Aligned_cols=198 Identities=9% Similarity=0.005 Sum_probs=129.2
Q ss_pred CCCeeeCCEEEEEEEcCC-CCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGL-QNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHF 187 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~-~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v 187 (1012)
..+-.-+.+++|+....+ .....||+.+..+...++|+. +...+..++|||||++|||+...++ ..+||+
T Consensus 162 g~~g~f~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~-------~~~~v~~p~wSPDG~~la~~s~~~~--~~~i~i 232 (429)
T PRK01742 162 AIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNR-------SSQPLMSPAWSPDGSKLAYVSFENK--KSQLVV 232 (429)
T ss_pred CCCCccCCEEEEEEEEcCCCceEEEEEECCCCCCceEecc-------CCCccccceEcCCCCEEEEEEecCC--CcEEEE
Confidence 334456789999887542 235789999987777777776 3345788999999999999876544 358999
Q ss_pred EECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECC
Q psy1288 188 KDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNK 267 (1012)
Q Consensus 188 ~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~ 267 (1012)
+|+++|+...++........++|||||+.|+|+.... |
T Consensus 233 ~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~---------------------------------g--------- 270 (429)
T PRK01742 233 HDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKD---------------------------------G--------- 270 (429)
T ss_pred EeCCCCceEEEecCCCccCceeECCCCCEEEEEEecC---------------------------------C---------
Confidence 9999988655443222335789999999999975320 0
Q ss_pred CCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeec
Q psy1288 268 DAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFS 347 (1012)
Q Consensus 268 ~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~ 347 (1012)
..+||.+|++++. .+.+..+. ..........+++.|++....++..+||.++..++.. ..++. .+ ....
T Consensus 271 ---~~~Iy~~d~~~~~---~~~lt~~~-~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~-~~l~~-~~--~~~~ 339 (429)
T PRK01742 271 ---VLNIYVMGANGGT---PSQLTSGA-GNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA-SLVGG-RG--YSAQ 339 (429)
T ss_pred ---cEEEEEEECCCCC---eEeeccCC-CCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEecC-CC--CCcc
Confidence 1234444443332 23333222 2222222334656788877777788999998854433 34432 22 2467
Q ss_pred ccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 348 GKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 348 ~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
|+|||+.|++... ..++.+|+
T Consensus 340 ~SpDG~~ia~~~~-----~~i~~~Dl 360 (429)
T PRK01742 340 ISADGKTLVMING-----DNVVKQDL 360 (429)
T ss_pred CCCCCCEEEEEcC-----CCEEEEEC
Confidence 9999999888754 35788998
No 48
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.43 E-value=4e-12 Score=145.14 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=145.5
Q ss_pred CCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEE
Q psy1288 108 YSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHF 187 (1012)
Q Consensus 108 ~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v 187 (1012)
.+.++++|..++|+....++ .+.+|+.+...+..+++++.+ .....++|||||++|||+..++|+ .+||+
T Consensus 197 ~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~-------g~~~~P~fspDG~~l~f~~~rdg~--~~iy~ 266 (425)
T COG0823 197 TPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFN-------GNNGAPAFSPDGSKLAFSSSRDGS--PDIYL 266 (425)
T ss_pred ccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccC-------CccCCccCCCCCCEEEEEECCCCC--ccEEE
Confidence 34566999999998876533 278999999888888887744 245689999999999999999875 59999
Q ss_pred EECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcc----cCCCCCceEEEEeeccccceeeeeeecCCCEEEE
Q psy1288 188 KDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK----KHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVF 263 (1012)
Q Consensus 188 ~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~----~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~ 263 (1012)
+|+.++...+++...+....++|||||++|+|++++...... .++....++.... ..-..+.|+|||++|+|
T Consensus 267 ~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~----~~~~~p~~SpdG~~i~~ 342 (425)
T COG0823 267 MDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSG----GGNSNPVWSPDGDKIVF 342 (425)
T ss_pred EcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccC----CCCcCccCCCCCCEEEE
Confidence 999999877766655555789999999999999876421100 1111111111111 11125679999999999
Q ss_pred EECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEE
Q psy1288 264 KTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTI 343 (1012)
Q Consensus 264 ~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v 343 (1012)
.+..++ ...++..++..... |+.+.... ..... ....++..+++.....+.+.|...+. +|+....+....+.+
T Consensus 343 ~~~~~g-~~~i~~~~~~~~~~--~~~lt~~~-~~e~p-s~~~ng~~i~~~s~~~~~~~l~~~s~-~g~~~~~~~~~~~~~ 416 (425)
T COG0823 343 ESSSGG-QWDIDKNDLASGGK--IRILTSTY-LNESP-SWAPNGRMIMFSSGQGGGSVLSLVSL-DGRVSRPLPLADGDV 416 (425)
T ss_pred EeccCC-ceeeEEeccCCCCc--EEEccccc-cCCCC-CcCCCCceEEEeccCCCCceEEEeec-cceeEEEEeccCcce
Confidence 984322 36788887765441 44333221 11111 11234456666666666788888887 676555555444555
Q ss_pred Eeecccc
Q psy1288 344 VGFSGKK 350 (1012)
Q Consensus 344 ~~~~~sp 350 (1012)
..+.|++
T Consensus 417 ~~p~w~~ 423 (425)
T COG0823 417 RVPAWSP 423 (425)
T ss_pred ecccccC
Confidence 4555543
No 49
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.43 E-value=9.8e-12 Score=145.04 Aligned_cols=211 Identities=15% Similarity=0.161 Sum_probs=140.8
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|.+.+. +...||+.+..+++.+++.... + ....++|||||++|+|+.+.+|. .+||++
T Consensus 209 p~wSPDG~~la~~s~~~--~~~~i~i~dl~tg~~~~l~~~~-----g--~~~~~~wSPDG~~La~~~~~~g~--~~Iy~~ 277 (429)
T PRK01742 209 PAWSPDGSKLAYVSFEN--KKSQLVVHDLRSGARKVVASFR-----G--HNGAPAFSPDGSRLAFASSKDGV--LNIYVM 277 (429)
T ss_pred ceEcCCCCEEEEEEecC--CCcEEEEEeCCCCceEEEecCC-----C--ccCceeECCCCCEEEEEEecCCc--EEEEEE
Confidence 44569999999998754 3478999988777777776532 1 23468999999999999877664 489999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeec-------cccceeeeeeecCCCEE
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTV-------NVAPITSQYITNEGPQF 261 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~-------~~~~i~~~~~s~dg~~l 261 (1012)
|+++++.++++........+.|||||+.|+|++.+.. ..+++..... .... ....|+|||+.|
T Consensus 278 d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g---------~~~I~~~~~~~~~~~~l~~~~-~~~~~SpDG~~i 347 (429)
T PRK01742 278 GANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSG---------SPQVYRMSASGGGASLVGGRG-YSAQISADGKTL 347 (429)
T ss_pred ECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCC---------CceEEEEECCCCCeEEecCCC-CCccCCCCCCEE
Confidence 9999988777665555678999999999999975421 1122211110 0011 123589999999
Q ss_pred EEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCce
Q psy1288 262 VFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVG 341 (1012)
Q Consensus 262 ~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~ 341 (1012)
++... ..++.+|+.++. ++.+...... ......++++.+++...+++...+++++. +|+..+.++...+
T Consensus 348 a~~~~-----~~i~~~Dl~~g~---~~~lt~~~~~--~~~~~sPdG~~i~~~s~~g~~~~l~~~~~-~G~~~~~l~~~~g 416 (429)
T PRK01742 348 VMING-----DNVVKQDLTSGS---TEVLSSTFLD--ESPSISPNGIMIIYSSTQGLGKVLQLVSA-DGRFKARLPGSDG 416 (429)
T ss_pred EEEcC-----CCEEEEECCCCC---eEEecCCCCC--CCceECCCCCEEEEEEcCCCceEEEEEEC-CCCceEEccCCCC
Confidence 98864 357888987765 3444322111 11123446567777776666667777777 5766666765555
Q ss_pred EEEeeccccc
Q psy1288 342 TIVGFSGKKK 351 (1012)
Q Consensus 342 ~v~~~~~spd 351 (1012)
.+..++|+|-
T Consensus 417 ~~~~p~wsp~ 426 (429)
T PRK01742 417 QVKFPAWSPY 426 (429)
T ss_pred CCCCcccCCC
Confidence 5667778763
No 50
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.43 E-value=1.1e-11 Score=140.95 Aligned_cols=136 Identities=13% Similarity=0.026 Sum_probs=90.7
Q ss_pred ceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHH
Q psy1288 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWH 481 (1012)
Q Consensus 402 ~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 481 (1012)
..++.+..+.||.+|.+..+.|.+ ..+.|+||++||...... ..|. .....|+++||.|+.+|+||.|.....
T Consensus 60 ~~~~~~~~~~~g~~l~~~~~~p~~---~~~~~~iv~lHG~~~~~~-~~~~-~~~~~l~~~g~~v~~~D~~G~G~S~~~-- 132 (349)
T PLN02385 60 KTEESYEVNSRGVEIFSKSWLPEN---SRPKAAVCFCHGYGDTCT-FFFE-GIARKIASSGYGVFAMDYPGFGLSEGL-- 132 (349)
T ss_pred ceeeeeEEcCCCCEEEEEEEecCC---CCCCeEEEEECCCCCccc-hHHH-HHHHHHHhCCCEEEEecCCCCCCCCCC--
Confidence 344445667899999998888864 245689999999643221 1122 234456657999999999998754211
Q ss_pred hhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 482 DGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 482 ~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+.........+|+.+.++.+.........++.++|+|+||.+++.++.++|+++.++|...|
T Consensus 133 -~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p 195 (349)
T PLN02385 133 -HGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAP 195 (349)
T ss_pred -CCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecc
Confidence 000001112244555555555443334456899999999999999999999999999888876
No 51
>PHA02857 monoglyceride lipase; Provisional
Probab=99.40 E-value=2.5e-11 Score=133.31 Aligned_cols=265 Identities=11% Similarity=0.054 Sum_probs=143.7
Q ss_pred EECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcC
Q psy1288 408 YPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLL 487 (1012)
Q Consensus 408 ~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 487 (1012)
+.++||.+|++.++.|.. .+.++|+++||..... ..|.. ....|.++||.|+.+|.||.|..... .....
T Consensus 5 ~~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~~--~~~~~-~~~~l~~~g~~via~D~~G~G~S~~~---~~~~~ 74 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT----YPKALVFISHGAGEHS--GRYEE-LAENISSLGILVFSHDHIGHGRSNGE---KMMID 74 (276)
T ss_pred eecCCCCEEEEEeccCCC----CCCEEEEEeCCCcccc--chHHH-HHHHHHhCCCEEEEccCCCCCCCCCc---cCCcC
Confidence 456799999999998742 4568899999975432 24443 34556667999999999998754221 00001
Q ss_pred CCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccC
Q psy1288 488 NKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNN 567 (1012)
Q Consensus 488 ~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~ 567 (1012)
.....++|+...+.++... ....++.++|+|+||.+++.++.+.|++++++|..+| ..+.........+.. .
T Consensus 75 ~~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p---~~~~~~~~~~~~~~~---~ 146 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSP---LVNAEAVPRLNLLAA---K 146 (276)
T ss_pred CHHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecc---ccccccccHHHHHHH---H
Confidence 1112245666666655443 2245799999999999999999899999999999877 111000000000000 0
Q ss_pred cccccccCCCCcccccCCCC--cchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCc--ccCCCCCCcccC
Q psy1288 568 MFHFCDLDTIPDRKIEGKLP--LTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSP--LHNIQGPDELKG 643 (1012)
Q Consensus 568 ~~~~~dl~~~~~~~~~~~~p--lt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP--~~~~~~p~~~~~ 643 (1012)
+... .++........+ ++.. ......+.. . .+ .............+..... ...+ .+
T Consensus 147 ~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~-~~--~~~~~~~~~~~~~~~~~~~~~~~~l------~~ 207 (276)
T PHA02857 147 LMGI----FYPNKIVGKLCPESVSRD---MDEVYKYQY---D-PL--VNHEKIKAGFASQVLKATNKVRKII------PK 207 (276)
T ss_pred HHHH----hCCCCccCCCCHhhccCC---HHHHHHHhc---C-CC--ccCCCccHHHHHHHHHHHHHHHHhc------cc
Confidence 0000 000000000000 0000 000000000 0 00 0000000000011111100 0112 25
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcccc-chhhhhHHHHHHHHhC
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTK-QFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~-~~~~~~~~~~fl~~~l 720 (1012)
+++| +|++||++|..+++..+.++...+.. .+.+.+++++||........ ..+.+.++.+|++.+.
T Consensus 208 i~~P-vliv~G~~D~i~~~~~~~~l~~~~~~----------~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 208 IKTP-ILILQGTNNEISDVSGAYYFMQHANC----------NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred CCCC-EEEEecCCCCcCChHHHHHHHHHccC----------CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 7888 99999999999999988777665421 35788899999987654332 3456778889998763
No 52
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.39 E-value=2.6e-11 Score=141.67 Aligned_cols=214 Identities=14% Similarity=0.148 Sum_probs=144.0
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK 188 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~ 188 (1012)
+.++|||++++|....+ +...||+.+..++..+.+.... .....+.|||||++|+|+.+..|. .+||++
T Consensus 195 p~~Spdg~~la~~~~~~--~~~~i~v~d~~~g~~~~~~~~~-------~~~~~~~~spDg~~l~~~~~~~~~--~~i~~~ 263 (417)
T TIGR02800 195 PAWSPDGQKLAYVSFES--GKPEIYVQDLATGQREKVASFP-------GMNGAPAFSPDGSKLAVSLSKDGN--PDIYVM 263 (417)
T ss_pred ccCCCCCCEEEEEEcCC--CCcEEEEEECCCCCEEEeecCC-------CCccceEECCCCCEEEEEECCCCC--ccEEEE
Confidence 34679999999987655 3467999988777666665421 124468999999999999877654 489999
Q ss_pred ECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---------ccceeeeeeecCCC
Q psy1288 189 DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN---------VAPITSQYITNEGP 259 (1012)
Q Consensus 189 dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~---------~~~i~~~~~s~dg~ 259 (1012)
|+++++..+++........+.|+|||+.|+|++.+.. ..+++.....+ ......+.|+|||+
T Consensus 264 d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g---------~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~ 334 (417)
T TIGR02800 264 DLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG---------SPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGD 334 (417)
T ss_pred ECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCC---------CceEEEEECCCCCEEEeecCCCCccCeEECCCCC
Confidence 9999887666544333457899999999999876421 11222211100 01122346999999
Q ss_pred EEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC
Q psy1288 260 QFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD 339 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~ 339 (1012)
.|++..... ..++|+.+++.++. ..++.+... ........+++.|++....++...+++++. +|+....++.+
T Consensus 335 ~i~~~~~~~-~~~~i~~~d~~~~~----~~~l~~~~~-~~~p~~spdg~~l~~~~~~~~~~~l~~~~~-~g~~~~~~~~~ 407 (417)
T TIGR02800 335 LIAFVHREG-GGFNIAVMDLDGGG----ERVLTDTGL-DESPSFAPNGRMILYATTRGGRGVLGLVST-DGRFRARLPLG 407 (417)
T ss_pred EEEEEEccC-CceEEEEEeCCCCC----eEEccCCCC-CCCceECCCCCEEEEEEeCCCcEEEEEEEC-CCceeeECCCC
Confidence 999887654 56789999997743 344443221 112123446678888888888888999887 56666667766
Q ss_pred ceEEEeeccc
Q psy1288 340 VGTIVGFSGK 349 (1012)
Q Consensus 340 ~~~v~~~~~s 349 (1012)
.+.+..++|+
T Consensus 408 ~g~~~~~~ws 417 (417)
T TIGR02800 408 NGDVREPAWS 417 (417)
T ss_pred CCCcCCCCCC
Confidence 6666555553
No 53
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.37 E-value=4.4e-11 Score=146.71 Aligned_cols=238 Identities=13% Similarity=0.077 Sum_probs=141.2
Q ss_pred HHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcC--CCC------------CCcEEEEec
Q psy1288 454 KIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASG--YTQ------------SSRLAIQGG 519 (1012)
Q Consensus 454 ~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~--~~d------------~~~i~i~G~ 519 (1012)
...++..+||+|+..|.||.++..+.+.. ......+|..++++|+..+. ++| ..+|+++|.
T Consensus 271 ~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~ 345 (767)
T PRK05371 271 LNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGK 345 (767)
T ss_pred HHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEE
Confidence 34677778999999999999876554422 23456789999999999542 223 579999999
Q ss_pred ChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhh
Q psy1288 520 SNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDML 599 (1012)
Q Consensus 520 S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~ 599 (1012)
||||+++..+++..|..++|+|+.++ +++|.+++..++....+..+. -.+...+...+..... .... .....
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~---is~~yd~yr~~G~~~~~~g~~-ged~d~l~~~~~~r~~-~~~~---~~~~~ 417 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAA---ISSWYDYYRENGLVRAPGGYQ-GEDLDVLAELTYSRNL-LAGD---YLRHN 417 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCC---CCcHHHHhhcCCceeccCCcC-CcchhhHHHHhhhccc-Ccch---hhcch
Confidence 99999999888888888999999999 888765543322211110000 0000000000000000 0000 00000
Q ss_pred -hccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhcc
Q psy1288 600 -KFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRD 678 (1012)
Q Consensus 600 -~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~ 678 (1012)
.+.... . .+ ..+-....+..-+.|...++..++. +++.| +|++||..|..|++.++.+++.+|+++
T Consensus 418 ~~~~~~~-~-~~-~~~~~~~~~~y~~fW~~rn~~~~~~------kIkvP-vLlIhGw~D~~V~~~~s~~ly~aL~~~--- 484 (767)
T PRK05371 418 EACEKLL-A-EL-TAAQDRKTGDYNDFWDDRNYLKDAD------KIKAS-VLVVHGLNDWNVKPKQVYQWWDALPEN--- 484 (767)
T ss_pred HHHHHHH-h-hh-hhhhhhcCCCccHHHHhCCHhhHhh------CCCCC-EEEEeeCCCCCCChHHHHHHHHHHHhc---
Confidence 000000 0 00 0000000001112345555555555 68899 999999999999999999999999987
Q ss_pred CCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCCC
Q psy1288 679 YPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPVL 723 (1012)
Q Consensus 679 ~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~~ 723 (1012)
+.+..+.+. .++|+...... ..+....+++|++++|+..
T Consensus 485 ----g~pkkL~l~-~g~H~~~~~~~-~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 485 ----GVPKKLFLH-QGGHVYPNNWQ-SIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred ----CCCeEEEEe-CCCccCCCchh-HHHHHHHHHHHHHhccccC
Confidence 777777665 45787644322 2344556779999998753
No 54
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.36 E-value=9.5e-11 Score=133.10 Aligned_cols=255 Identities=17% Similarity=0.183 Sum_probs=158.1
Q ss_pred eeeCCEEEEEEEcCCC----CeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEE
Q psy1288 112 QRQGDHYFFFHNTGLQ----NHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHF 187 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~----~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v 187 (1012)
||||+++++..+.... ....+|+.+...++.+.|... ...+..+.|||||++|||+.+. +||+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-------~~~~~~~~~sP~g~~~~~v~~~------nly~ 67 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-------PPKLQDAKWSPDGKYIAFVRDN------NLYL 67 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-------ETTBSEEEE-SSSTEEEEEETT------EEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-------ccccccceeecCCCeeEEEecC------ceEE
Confidence 4899998887663211 235788888888877777663 1236789999999999999752 8999
Q ss_pred EECCCCceeceeecc------------------eeeeeeEEeeCCCeEEEEecCCCCCcc--------------------
Q psy1288 188 KDVATGKEYPEVLHR------------------LKFVSIAWTHDHKGVFYSNQEPKSKSK-------------------- 229 (1012)
Q Consensus 188 ~dl~tg~~~~~t~~~------------------~~~~~~~WSpDG~~l~y~~~~~~~~g~-------------------- 229 (1012)
.++.+++.+++|..+ .....+.|||||+.|+|.+.+......
T Consensus 68 ~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~ 147 (353)
T PF00930_consen 68 RDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIR 147 (353)
T ss_dssp ESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE
T ss_pred EECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccc
Confidence 999999888777644 012668899999999999855332100
Q ss_pred --cCCCCCce--EEEEeeccc--cc-------------eeeeeeecCCCEEEE-EECCCCCCceEEEEeCCCCcccCcEE
Q psy1288 230 --KHSKKNRS--SAYHLTVNV--AP-------------ITSQYITNEGPQFVF-KTNKDAPNYRLITIDFDNFAESNWKT 289 (1012)
Q Consensus 230 --~~~~~~~~--l~~~~~~~~--~~-------------i~~~~~s~dg~~l~~-~tn~~~~~~~L~~~dl~~~~~~~~~~ 289 (1012)
..+..+.. ++.....+. .. +....|++++++|++ .+||......|..+|..++. .+.
T Consensus 148 YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~---~~~ 224 (353)
T PF00930_consen 148 YPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE---TRV 224 (353)
T ss_dssp --BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT---CEE
T ss_pred cCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc---eeE
Confidence 00011111 111100000 00 112358899985555 56888888999999997765 233
Q ss_pred eeccCCCceee---eeEE--ecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEE-EeecccccCcEEEEEecCCC
Q psy1288 290 LIEENKDDVLD---WATC--VANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTI-VGFSGKKKYSEIFYSFMSFL 363 (1012)
Q Consensus 290 l~~~~~~~~~~---~~~~--~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v-~~~~~spdg~~l~~~~ss~~ 363 (1012)
+..+.....++ .... .+++.+++....+|..||++++.+++. .+.|+.....| ..+.++++++.|+|.++...
T Consensus 225 ~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~ 303 (353)
T PF00930_consen 225 VLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDN 303 (353)
T ss_dssp EEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGG
T ss_pred EEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCC
Confidence 33332222221 2222 355666666668899999999995544 45777665555 34677889999999987733
Q ss_pred -CCcEEEEEeCCCCCCC-CCCcceEEEEe
Q psy1288 364 -QPTIIFHCNIPARVDP-NSKLETSIFRE 390 (1012)
Q Consensus 364 -~p~~l~~~d~~~~~~~-~g~~~~~~l~~ 390 (1012)
.-..||++++ + ++ +.+.|+.
T Consensus 304 p~~r~lY~v~~-----~~~~--~~~~LT~ 325 (353)
T PF00930_consen 304 PGERHLYRVSL-----DSGG--EPKCLTC 325 (353)
T ss_dssp TTSBEEEEEET-----TETT--EEEESST
T ss_pred CCceEEEEEEe-----CCCC--CeEeccC
Confidence 2357999999 4 44 5666654
No 55
>PRK11460 putative hydrolase; Provisional
Probab=99.35 E-value=3.6e-11 Score=127.82 Aligned_cols=187 Identities=15% Similarity=0.153 Sum_probs=124.6
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCC----CCchhHHhhhhcCCCcch-------HhHHHH
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGG----EYGERWHDGGRLLNKQNV-------FDDFQC 498 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g----~~g~~~~~~~~~~~~~~~-------~~D~~a 498 (1012)
...|+||++||..+... .|.. ....+...+..+..+.++|.. ..|..|..... ...... ...+.+
T Consensus 14 ~~~~~vIlLHG~G~~~~--~~~~-l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~-~~~~~~~~~~~~~~~~l~~ 89 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPV--AMGE-IGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQG-ITEDNRQARVAAIMPTFIE 89 (232)
T ss_pred CCCcEEEEEeCCCCChH--HHHH-HHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCC-CCccchHHHHHHHHHHHHH
Confidence 45689999999654332 3333 334455446444455555532 22456654211 111111 223334
Q ss_pred HHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCC
Q psy1288 499 AAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIP 578 (1012)
Q Consensus 499 ~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~ 578 (1012)
.++++.++..+++++|+++|+|+||.+++.++.+.|+++.+++...+ .
T Consensus 90 ~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg-------------------------~------- 137 (232)
T PRK11460 90 TVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSG-------------------------R------- 137 (232)
T ss_pred HHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecc-------------------------c-------
Confidence 55666666667889999999999999999988888888877776665 0
Q ss_pred cccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCC
Q psy1288 579 DRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDD 658 (1012)
Q Consensus 579 ~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~ 658 (1012)
+ .. .+. .. ..+.| +|++||.+|+
T Consensus 138 -------------------------------~-~~--~~~----------------~~------~~~~p-vli~hG~~D~ 160 (232)
T PRK11460 138 -------------------------------Y-AS--LPE----------------TA------PTATT-IHLIHGGEDP 160 (232)
T ss_pred -------------------------------c-cc--ccc----------------cc------cCCCc-EEEEecCCCC
Confidence 0 00 000 00 12345 9999999999
Q ss_pred CCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 659 RVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 659 ~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
.|++..+.++...|+++ +..++++++++++|++.. +++.++.+|+.+.+..
T Consensus 161 vvp~~~~~~~~~~L~~~-------g~~~~~~~~~~~gH~i~~------~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 161 VIDVAHAVAAQEALISL-------GGDVTLDIVEDLGHAIDP------RLMQFALDRLRYTVPK 211 (232)
T ss_pred ccCHHHHHHHHHHHHHC-------CCCeEEEEECCCCCCCCH------HHHHHHHHHHHHHcch
Confidence 99999999999999988 888999999999999853 5566677888887643
No 56
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.33 E-value=2.3e-11 Score=135.99 Aligned_cols=241 Identities=20% Similarity=0.191 Sum_probs=147.4
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcC-hhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCC
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS-VTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLN 488 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~-~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 488 (1012)
..++..+++.++.| ......+.|+||++|||.......... .....++...|+.|+++|||-..+. .
T Consensus 58 ~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~-----------~ 125 (312)
T COG0657 58 GPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH-----------P 125 (312)
T ss_pred CCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------C
Confidence 34556678888888 223456789999999996555443333 3445566667999999999976643 3
Q ss_pred CcchHhHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHhhCCC----ceeEEEEccCCCccccCcceeeeecc
Q psy1288 489 KQNVFDDFQCAAEYLIASG---YTQSSRLAIQGGSNGGLLTAACINQRPD----LFGAAIVQVGNPEISDCGRWLIVHTM 561 (1012)
Q Consensus 489 ~~~~~~D~~a~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~~~~~i~d~~~~~~~~~~ 561 (1012)
....++|+.+++.|+.++. .+|+++|+++|+|+||.+++.++....+ ...+.+...| ..|...
T Consensus 126 ~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P---~~d~~~------- 195 (312)
T COG0657 126 FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISP---LLDLTS------- 195 (312)
T ss_pred CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEec---ccCCcc-------
Confidence 3455789999999999874 3799999999999999999887765432 3466777777 222100
Q ss_pred cccccCcccccccCCCCcccc-cCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCc
Q psy1288 562 KDCKNNMFHFCDLDTIPDRKI-EGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDE 640 (1012)
Q Consensus 562 ~~~~~~~~~~~dl~~~~~~~~-~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~ 640 (1012)
..+.... .....++... +..+ +.. .+ .+...+... ...+|+....
T Consensus 196 --------------~~~~~~~~~~~~~~~~~~--~~~~--~~~-----~~---~~~~~~~~~----p~~spl~~~~---- 241 (312)
T COG0657 196 --------------SAASLPGYGEADLLDAAA--ILAW--FAD-----LY---LGAAPDRED----PEASPLASDD---- 241 (312)
T ss_pred --------------cccchhhcCCccccCHHH--HHHH--HHH-----Hh---CcCccccCC----CccCcccccc----
Confidence 0000000 0001111100 0000 000 00 011100000 1234443321
Q ss_pred ccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccc-cchhhhhHHHHHHH
Q psy1288 641 LKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTT-KQFPLTIPVIYFYL 717 (1012)
Q Consensus 641 ~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~-~~~~~~~~~~~fl~ 717 (1012)
-...|++|+++|+.|+..+ ++..+..+|+++ ++++++..+++..|+|..... ...+.+..+..|+.
T Consensus 242 --~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~a-------gv~~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 242 --LSGLPPTLIQTAEFDPLRD--EGEAYAERLRAA-------GVPVELRVYPGMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred --ccCCCCEEEEecCCCcchh--HHHHHHHHHHHc-------CCeEEEEEeCCcceeccccCcHHHHHHHHHHHHHHH
Confidence 0126779999999999877 888999999999 999999999999999844332 12233344445554
No 57
>PRK10749 lysophospholipase L2; Provisional
Probab=99.27 E-value=3.1e-10 Score=127.88 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=84.0
Q ss_pred EEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhh
Q psy1288 404 KQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDG 483 (1012)
Q Consensus 404 ~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 483 (1012)
+...+...||.++.+..+.+. .+.++|+++||..... ..|.. ....+.+.||.|+.+|+||.|.........
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~--~~y~~-~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESY--VKYAE-LAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchH--HHHHH-HHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 445566779999988777553 2346899999964322 12222 233455579999999999988654321110
Q ss_pred hhcCCCcchHhH----HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 484 GRLLNKQNVFDD----FQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 484 ~~~~~~~~~~~D----~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
. ......+++ +.+.++.+... .+..++.++|+|+||.+++.++.++|+.++++|..+|
T Consensus 103 ~--~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p 164 (330)
T PRK10749 103 H--RGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAP 164 (330)
T ss_pred C--cCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECc
Confidence 0 001123444 44444433322 2457899999999999999999889999999998877
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.25 E-value=2.2e-10 Score=125.86 Aligned_cols=128 Identities=13% Similarity=0.115 Sum_probs=91.0
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
+..+.+.||..+.+..+.+.. .+..+||.+||...... .|.. ....|..+||.|+..|.||+|...+
T Consensus 11 ~~~~~~~d~~~~~~~~~~~~~----~~~g~Vvl~HG~~Eh~~--ry~~-la~~l~~~G~~V~~~D~RGhG~S~r------ 77 (298)
T COG2267 11 EGYFTGADGTRLRYRTWAAPE----PPKGVVVLVHGLGEHSG--RYEE-LADDLAARGFDVYALDLRGHGRSPR------ 77 (298)
T ss_pred cceeecCCCceEEEEeecCCC----CCCcEEEEecCchHHHH--HHHH-HHHHHHhCCCEEEEecCCCCCCCCC------
Confidence 344677899999888877654 22269999999754332 2222 3456667899999999999997643
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCC--CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGY--TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
........|+|....++.+++... .-..+++++||||||++++..+.+.+..+.++|..+|
T Consensus 78 ~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP 140 (298)
T COG2267 78 GQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSP 140 (298)
T ss_pred CCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECc
Confidence 112223336666666655555422 2346899999999999999999999999999999988
No 59
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.24 E-value=3.4e-11 Score=119.38 Aligned_cols=217 Identities=15% Similarity=0.166 Sum_probs=139.6
Q ss_pred CCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 431 NNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
..-.|+++||-.+...+..+ ....|.++||.|.+|+++|+|-....+..-+..+| ++|+.++.++|.+.++
T Consensus 14 G~~AVLllHGFTGt~~Dvr~---Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy-- 84 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRM---LGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY-- 84 (243)
T ss_pred CCEEEEEEeccCCCcHHHHH---HHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC--
Confidence 34789999996554432222 34567788999999999999988777766555555 5688889999998877
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcch
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQ 590 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~ 590 (1012)
+.|++.|.|+||.+++.++.+.| .+.++..+++..+.++. +.+
T Consensus 85 -~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--------------------------------~ii-- 127 (243)
T COG1647 85 -DEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--------------------------------III-- 127 (243)
T ss_pred -CeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccch--------------------------------hhh--
Confidence 68999999999999999999987 46666665522222210 001
Q ss_pred hhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCC--ccc----------CCCCCCcccCCCCCcEEEEeeCCCC
Q psy1288 591 VVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYS--PLH----------NIQGPDELKGKQYPATLLMTADHDD 658 (1012)
Q Consensus 591 ~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~s--P~~----------~~~~p~~~~~~~~P~vLiihG~~D~ 658 (1012)
...+.+-+ . ...+-.......-+.++++. |.. .+. .+++.+..| +|++.|.+|+
T Consensus 128 -----e~~l~y~~-----~-~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~--~~~~~I~~p-t~vvq~~~D~ 193 (243)
T COG1647 128 -----EGLLEYFR-----N-AKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDAR--RSLDKIYSP-TLVVQGRQDE 193 (243)
T ss_pred -----HHHHHHHH-----H-hhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHH--hhhhhcccc-hhheecccCC
Confidence 01111100 0 00111111111112233333 111 111 123367788 9999999999
Q ss_pred CCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHH
Q psy1288 659 RVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYL 717 (1012)
Q Consensus 659 ~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~ 717 (1012)
.|+...+..++..+.. .+..|.++.+.||-...+..+ -+...+++.||+
T Consensus 194 mv~~~sA~~Iy~~v~s---------~~KeL~~~e~SgHVIt~D~Er-d~v~e~V~~FL~ 242 (243)
T COG1647 194 MVPAESANFIYDHVES---------DDKELKWLEGSGHVITLDKER-DQVEEDVITFLE 242 (243)
T ss_pred CCCHHHHHHHHHhccC---------CcceeEEEccCCceeecchhH-HHHHHHHHHHhh
Confidence 9999988887777653 466899999999998775543 245567778875
No 60
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.22 E-value=1.7e-10 Score=119.44 Aligned_cols=128 Identities=19% Similarity=0.183 Sum_probs=88.5
Q ss_pred EEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCch--hHHhhhhcCCCcchH
Q psy1288 416 IPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGE--RWHDGGRLLNKQNVF 493 (1012)
Q Consensus 416 i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~--~~~~~~~~~~~~~~~ 493 (1012)
|.+.++.|++.. .++.|+||.+||+.+......-...+..+.++.|++|+.++......... .|.. .....+....
T Consensus 1 l~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~ 78 (220)
T PF10503_consen 1 LSYRLYVPPGAP-RGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDV 78 (220)
T ss_pred CcEEEecCCCCC-CCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccch
Confidence 357788888753 35789999999986543211111234455666799999998543222222 3333 1122223344
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 494 DDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 494 ~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+...++++..+..+|++||++.|.|+||.|+..++..+|++|.++...++
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 4455667888888889999999999999999999999999999999887777
No 61
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.21 E-value=6.6e-11 Score=124.38 Aligned_cols=200 Identities=20% Similarity=0.172 Sum_probs=118.7
Q ss_pred EEEEcCCCCCCCCCCcChhHHHHHH-hCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHc---CCCC
Q psy1288 435 ILYGYGGFAVSLQPGFSVTKIVFLR-DFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIAS---GYTQ 510 (1012)
Q Consensus 435 vv~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~---~~~d 510 (1012)
||++|||................++ +.|++|+.+|||-..+ ......++|+.++++|+.++ -..|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 6899999766554444444444444 4799999999996543 23345688999999999998 2468
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCC----ceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCC
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPD----LFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKL 586 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~ 586 (1012)
+++|+++|.|+||.+++.++.+..+ ..++++..+| +.|+.... -..+.... .....
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p---~~d~~~~~-----------~~~~~~~~------~~~~~ 129 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISP---WTDLQDFD-----------GPSYDDSN------ENKDD 129 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESC---HSSTSTSS-----------CHHHHHHH------HHSTT
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccc---cccchhcc-----------cccccccc------ccccc
Confidence 9999999999999999888764322 4788999988 44320000 00000000 00000
Q ss_pred C-cchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHH
Q psy1288 587 P-LTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHS 665 (1012)
Q Consensus 587 p-lt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s 665 (1012)
+ ++.. ..+.. + ..+-...+.. ....+|..... ....|++++++|+.|.. ..++
T Consensus 130 ~~~~~~---~~~~~----------~-~~~~~~~~~~----~~~~sp~~~~~------~~~~Pp~~i~~g~~D~l--~~~~ 183 (211)
T PF07859_consen 130 PFLPAP---KIDWF----------W-KLYLPGSDRD----DPLASPLNASD------LKGLPPTLIIHGEDDVL--VDDS 183 (211)
T ss_dssp SSSBHH---HHHHH----------H-HHHHSTGGTT----STTTSGGGSSC------CTTCHEEEEEEETTSTT--HHHH
T ss_pred cccccc---ccccc----------c-cccccccccc----ccccccccccc------cccCCCeeeeccccccc--hHHH
Confidence 0 0000 00000 0 0000000000 01335554411 34688999999999975 4688
Q ss_pred HHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCC
Q psy1288 666 LKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 698 (1012)
Q Consensus 666 ~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~ 698 (1012)
..+.++|++. +.+++++++++..|+|
T Consensus 184 ~~~~~~L~~~-------gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 184 LRFAEKLKKA-------GVDVELHVYPGMPHGF 209 (211)
T ss_dssp HHHHHHHHHT-------T-EEEEEEETTEETTG
T ss_pred HHHHHHHHHC-------CCCEEEEEECCCeEEe
Confidence 8999999998 9999999999999986
No 62
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.18 E-value=2.1e-09 Score=122.99 Aligned_cols=226 Identities=16% Similarity=0.093 Sum_probs=152.6
Q ss_pred cCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecce
Q psy1288 124 TGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRL 203 (1012)
Q Consensus 124 ~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~ 203 (1012)
+.+.....|+..+-.+...+.+++ ....+-.+.|||||+.++|..-..+.. .+||++|+++|+.........
T Consensus 167 ~~~~~~~~l~~~D~dg~~~~~l~~-------~~~~~~~p~ws~~~~~~~y~~f~~~~~-~~i~~~~l~~g~~~~i~~~~g 238 (425)
T COG0823 167 DGGPLPYELALGDYDGYNQQKLTD-------SGSLILTPAWSPDGKKLAYVSFELGGC-PRIYYLDLNTGKRPVILNFNG 238 (425)
T ss_pred ccCCCCceEEEEccCCcceeEecc-------cCcceeccccCcCCCceEEEEEecCCC-ceEEEEeccCCccceeeccCC
Confidence 345567889999887666677776 334567899999999999997765532 689999999998655433333
Q ss_pred eeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeec--------cccce-eeeeeecCCCEEEEEECCCCCCceE
Q psy1288 204 KFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTV--------NVAPI-TSQYITNEGPQFVFKTNKDAPNYRL 274 (1012)
Q Consensus 204 ~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~--------~~~~i-~~~~~s~dg~~l~~~tn~~~~~~~L 274 (1012)
....++|||||+.|+|+..+.. +..++..... +..++ ..+.|+|||++|+|.+++.+ .-+|
T Consensus 239 ~~~~P~fspDG~~l~f~~~rdg---------~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G-~p~I 308 (425)
T COG0823 239 NNGAPAFSPDGSKLAFSSSRDG---------SPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGG-RPQI 308 (425)
T ss_pred ccCCccCCCCCCEEEEEECCCC---------CccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCC-Ccce
Confidence 3478999999999999986532 1222221110 00111 14569999999999999875 3489
Q ss_pred EEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcE
Q psy1288 275 ITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSE 354 (1012)
Q Consensus 275 ~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~ 354 (1012)
+.++++..+ .++++....... ......+++.+++....+|...+...++.++...+.++.. ......+++++++.
T Consensus 309 ~~~~~~g~~---~~riT~~~~~~~-~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~-~~~e~ps~~~ng~~ 383 (425)
T COG0823 309 YLYDLEGSQ---VTRLTFSGGGNS-NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTST-YLNESPSWAPNGRM 383 (425)
T ss_pred EEECCCCCc---eeEeeccCCCCc-CccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcccc-ccCCCCCcCCCCce
Confidence 999998765 355555543333 2223456678888776566677888888666534445433 22336688899998
Q ss_pred EEEEecCCCCCcEEEEEeC
Q psy1288 355 IFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 355 l~~~~ss~~~p~~l~~~d~ 373 (1012)
+.|..... .-..++.++.
T Consensus 384 i~~~s~~~-~~~~l~~~s~ 401 (425)
T COG0823 384 IMFSSGQG-GGSVLSLVSL 401 (425)
T ss_pred EEEeccCC-CCceEEEeec
Confidence 88887766 3445666665
No 63
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.16 E-value=2e-09 Score=123.14 Aligned_cols=274 Identities=11% Similarity=0.021 Sum_probs=145.0
Q ss_pred ceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHH
Q psy1288 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWH 481 (1012)
Q Consensus 402 ~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 481 (1012)
......+..++|..+.+..+.|.. ..+.++|+++||...... .|. .....|.++||.|+.+|+||.|......
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~~--~~~-~~a~~L~~~Gy~V~~~D~rGhG~S~~~~- 181 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHSG--RYL-HFAKQLTSCGFGVYAMDWIGHGGSDGLH- 181 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHHH--HHH-HHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 345566778899999988888853 234679999999754321 233 2345566679999999999988543211
Q ss_pred hhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCC---ceeEEEEccCCCccccCcceeee
Q psy1288 482 DGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPD---LFGAAIVQVGNPEISDCGRWLIV 558 (1012)
Q Consensus 482 ~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~~~~i~d~~~~~~~ 558 (1012)
+.........+|+...++++.... ...++.++|+|+||.+++.++. +|+ .+.++|..+| ...... .
T Consensus 182 --~~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP---~l~~~~---~ 250 (395)
T PLN02652 182 --GYVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSP---ALRVKP---A 250 (395)
T ss_pred --CCCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECc---cccccc---c
Confidence 000011122456777777766431 2247999999999999887664 454 6788888777 110000 0
Q ss_pred ecccccccCcccccccCCCCccccc----CCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCC-ccc
Q psy1288 559 HTMKDCKNNMFHFCDLDTIPDRKIE----GKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYS-PLH 633 (1012)
Q Consensus 559 ~~~~~~~~~~~~~~dl~~~~~~~~~----~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~s-P~~ 633 (1012)
... ...+..+.+ ..++..... ...+++.. ........ ..... .-|........+.+.... ...
T Consensus 251 ~~~---~~~~~~l~~-~~~p~~~~~~~~~~~~~~s~~---~~~~~~~~---~dp~~--~~g~i~~~~~~~~~~~~~~l~~ 318 (395)
T PLN02652 251 HPI---VGAVAPIFS-LVAPRFQFKGANKRGIPVSRD---PAALLAKY---SDPLV--YTGPIRVRTGHEILRISSYLTR 318 (395)
T ss_pred hHH---HHHHHHHHH-HhCCCCcccCcccccCCcCCC---HHHHHHHh---cCCCc--ccCCchHHHHHHHHHHHHHHHh
Confidence 000 000000000 000000000 00011100 00000000 00000 000000000001000000 011
Q ss_pred CCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHH
Q psy1288 634 NIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVI 713 (1012)
Q Consensus 634 ~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~ 713 (1012)
.+ .++++| +|++||..|..+++..+.+++.++... ...++++++++|...... ...+.+.++.
T Consensus 319 ~L------~~I~vP-vLIi~G~~D~vvp~~~a~~l~~~~~~~---------~k~l~~~~ga~H~l~~e~-~~e~v~~~I~ 381 (395)
T PLN02652 319 NF------KSVTVP-FMVLHGTADRVTDPLASQDLYNEAASR---------HKDIKLYDGFLHDLLFEP-EREEVGRDII 381 (395)
T ss_pred hc------ccCCCC-EEEEEeCCCCCCCHHHHHHHHHhcCCC---------CceEEEECCCeEEeccCC-CHHHHHHHHH
Confidence 22 257889 999999999999999998888776432 346777899999864432 2335667788
Q ss_pred HHHHHhCCC
Q psy1288 714 YFYLTSGPV 722 (1012)
Q Consensus 714 ~fl~~~l~~ 722 (1012)
+|+..++..
T Consensus 382 ~FL~~~~~~ 390 (395)
T PLN02652 382 DWMEKRLDL 390 (395)
T ss_pred HHHHHHhhc
Confidence 999988753
No 64
>KOG1552|consensus
Probab=99.15 E-value=6.1e-10 Score=114.24 Aligned_cols=202 Identities=17% Similarity=0.202 Sum_probs=131.7
Q ss_pred EEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHH-hCCeEEEEEcCCCCCCCchhHHh
Q psy1288 404 KQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLR-DFNGIYAIPNIRGGGEYGERWHD 482 (1012)
Q Consensus 404 ~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~-~~G~~v~~~d~RG~g~~g~~~~~ 482 (1012)
+-+..+..-|..+....+.|.. ...+++++.||... +.+-.......+. ..++.++..|++|.|..+..-.
T Consensus 36 ~v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~---Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps- 107 (258)
T KOG1552|consen 36 EVFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAA---DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS- 107 (258)
T ss_pred ceEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCccc---chHHHHHHHHHHhhcccceEEEEecccccccCCCcc-
Confidence 3344455667777666666654 24689999999621 1111111112222 2379999999999875433322
Q ss_pred hhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeeccc
Q psy1288 483 GGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMK 562 (1012)
Q Consensus 483 ~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~ 562 (1012)
..+.++|+.++.+||.+..- .+++|.++|+|+|...++.++.+.| ..++|...| +++-
T Consensus 108 ------E~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SP---f~S~---------- 165 (258)
T KOG1552|consen 108 ------ERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSP---FTSG---------- 165 (258)
T ss_pred ------cccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEecc---chhh----------
Confidence 23678999999999998755 7899999999999999999999887 789999988 1110
Q ss_pred ccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCccc
Q psy1288 563 DCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELK 642 (1012)
Q Consensus 563 ~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~ 642 (1012)
+.-+ ..- .. -..|.+.| +-...++
T Consensus 166 -----------~rv~------------------~~~----~~--~~~~~d~f---------------~~i~kI~------ 189 (258)
T KOG1552|consen 166 -----------MRVA------------------FPD----TK--TTYCFDAF---------------PNIEKIS------ 189 (258)
T ss_pred -----------hhhh------------------ccC----cc--eEEeeccc---------------cccCcce------
Confidence 0000 000 00 00122222 1134444
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT 702 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~ 702 (1012)
.+++| +|++||..|..+++.++.+++...+.+ ++-.+..++||....-.
T Consensus 190 ~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~----------~epl~v~g~gH~~~~~~ 238 (258)
T KOG1552|consen 190 KITCP-VLIIHGTDDEVVDFSHGKALYERCKEK----------VEPLWVKGAGHNDIELY 238 (258)
T ss_pred eccCC-EEEEecccCceecccccHHHHHhcccc----------CCCcEEecCCCcccccC
Confidence 67899 999999999999999999888876654 33444568888765433
No 65
>KOG1515|consensus
Probab=99.14 E-value=2.9e-09 Score=116.93 Aligned_cols=246 Identities=16% Similarity=0.153 Sum_probs=147.3
Q ss_pred CceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCC---CCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCC
Q psy1288 413 GTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSL---QPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNK 489 (1012)
Q Consensus 413 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 489 (1012)
...|...+|.|.......+.|+||++|||..... .+.|+..........+.+|+.+|||-..+ ...
T Consensus 71 ~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE-----------h~~ 139 (336)
T KOG1515|consen 71 FTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE-----------HPF 139 (336)
T ss_pred CCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC-----------CCC
Confidence 4567889999987655478999999999864433 33444333334456699999999997553 344
Q ss_pred cchHhHHHHHHHHHHHc----CCCCCCcEEEEecChHHHHHHHHHhhC------CCceeEEEEccCCCccccCcceeeee
Q psy1288 490 QNVFDDFQCAAEYLIAS----GYTQSSRLAIQGGSNGGLLTAACINQR------PDLFGAAIVQVGNPEISDCGRWLIVH 559 (1012)
Q Consensus 490 ~~~~~D~~a~~~~l~~~----~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~~i~d~~~~~~~~ 559 (1012)
...++|..+++.|+.++ ...|++|++|+|.|+||.++..++.+. +-..++.|...| +.
T Consensus 140 Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P---~~--------- 207 (336)
T KOG1515|consen 140 PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYP---FF--------- 207 (336)
T ss_pred CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEec---cc---------
Confidence 56689999999999886 458999999999999999987765442 235678888888 11
Q ss_pred cccccccCcccccccCCCCcccccCCCC-cchhhhhhhhhhhcccccccc-ccccccCCCCChHHHHHHHcCCcccCCCC
Q psy1288 560 TMKDCKNNMFHFCDLDTIPDRKIEGKLP-LTQVVHKVLDMLKFNKFTIGY-FWESDYGSPANSSQFEYLLGYSPLHNIQG 637 (1012)
Q Consensus 560 ~~~~~~~~~~~~~dl~~~~~~~~~~~~p-lt~~~~~~~d~~~~~~~~~g~-~~~~~~g~p~~~~~~~~~~~~sP~~~~~~ 637 (1012)
+.......- ...+. ...+ ++.. ..++.-......+. .+...| ..|..+..
T Consensus 208 ---~~~~~~~~e--~~~~~-----~~~~~~~~~---~~~~~w~~~lP~~~~~~~~p~--------------~np~~~~~- 259 (336)
T KOG1515|consen 208 ---QGTDRTESE--KQQNL-----NGSPELARP---KIDKWWRLLLPNGKTDLDHPF--------------INPVGNSL- 259 (336)
T ss_pred ---CCCCCCCHH--HHHhh-----cCCcchhHH---HHHHHHHHhCCCCCCCcCCcc--------------cccccccc-
Confidence 100000000 00000 0000 0000 11110000000000 000000 11221100
Q ss_pred CCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc---ccchhhhhHHHH
Q psy1288 638 PDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT---TKQFPLTIPVIY 714 (1012)
Q Consensus 638 p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~---~~~~~~~~~~~~ 714 (1012)
........+|++|++.++.|... .++..+.++|+.+ |..+++..+.++.|++.--. ....+.+..+.+
T Consensus 260 ~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~-------Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~ 330 (336)
T KOG1515|consen 260 AKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKA-------GVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVE 330 (336)
T ss_pred ccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHc-------CCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHH
Confidence 00113677888999999988654 6888899999988 99999999999999974321 233455555566
Q ss_pred HHHH
Q psy1288 715 FYLT 718 (1012)
Q Consensus 715 fl~~ 718 (1012)
|+..
T Consensus 331 fi~~ 334 (336)
T KOG1515|consen 331 FIKS 334 (336)
T ss_pred HHhh
Confidence 6654
No 66
>KOG2281|consensus
Probab=99.14 E-value=9.9e-11 Score=131.02 Aligned_cols=199 Identities=17% Similarity=0.164 Sum_probs=140.4
Q ss_pred CCCCCcEEEEeeCCCCCCCh-HHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc---------hhhhhHH
Q psy1288 643 GKQYPATLLMTADHDDRVSP-VHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ---------FPLTIPV 712 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~-~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~---------~~~~~~~ 712 (1012)
++|||.+|.+-|+ |.|.. -++++....|+-.. -.+.+++++.+..+|+-.-|..+... +++..+.
T Consensus 639 gkkYptvl~VYGG--P~VQlVnnsfkgi~ylR~~~---LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeg 713 (867)
T KOG2281|consen 639 GKKYPTVLNVYGG--PGVQLVNNSFKGIQYLRFCR---LASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEG 713 (867)
T ss_pred CCCCceEEEEcCC--CceEEeeccccceehhhhhh---hhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHH
Confidence 7899999999999 54443 23444443333210 01167887777777654444333221 5677788
Q ss_pred HHHHHHhCCCCCCCCCCCCCc--cCCccccccCccceeeeccccccccchhh-----hcccccCCCCCCCCCCCcc-cCC
Q psy1288 713 IYFYLTSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTDQKDDILIA-----EVLDMLKFNKFTIGYFWES-DYG 784 (1012)
Q Consensus 713 ~~fl~~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~g 784 (1012)
+.||.+..+ +.|.++++ ||||| ||.++.+++++|++|.| +|+||.-|-. . +.+ ..|
T Consensus 714 lq~Laeq~g----fidmdrV~vhGWSYG-------GYLSlm~L~~~P~IfrvAIAGapVT~W~~YDT----g-YTERYMg 777 (867)
T KOG2281|consen 714 LQMLAEQTG----FIDMDRVGVHGWSYG-------GYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDT----G-YTERYMG 777 (867)
T ss_pred HHHHHHhcC----cccchheeEeccccc-------cHHHHHHhhcCcceeeEEeccCcceeeeeecc----c-chhhhcC
Confidence 888887754 56677776 99999 99999999999999966 6888865521 1 223 348
Q ss_pred CCCChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCC
Q psy1288 785 SPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAG 864 (1012)
Q Consensus 785 ~~~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g 864 (1012)
-|++.|+ .+.+-|=+.+|. ++++. -.-+|++||--|-.|+-.+.--++.+|-++|. |-++++||+|-
T Consensus 778 ~P~~nE~--gY~agSV~~~Ve---klpde-pnRLlLvHGliDENVHF~Hts~Lvs~lvkagK-------pyeL~IfP~ER 844 (867)
T KOG2281|consen 778 YPDNNEH--GYGAGSVAGHVE---KLPDE-PNRLLLVHGLIDENVHFAHTSRLVSALVKAGK-------PYELQIFPNER 844 (867)
T ss_pred CCccchh--cccchhHHHHHh---hCCCC-CceEEEEecccccchhhhhHHHHHHHHHhCCC-------ceEEEEccccc
Confidence 8865443 245667777777 22221 13489999999999999999999999999877 99999999999
Q ss_pred CCCCCCchhhh
Q psy1288 865 HGGGKPTTKQL 875 (1012)
Q Consensus 865 H~~~~~~~~~~ 875 (1012)
|+++++..++.
T Consensus 845 HsiR~~es~~~ 855 (867)
T KOG2281|consen 845 HSIRNPESGIY 855 (867)
T ss_pred cccCCCccchh
Confidence 99998755443
No 67
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.13 E-value=1.5e-10 Score=126.57 Aligned_cols=133 Identities=22% Similarity=0.220 Sum_probs=92.5
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCC-C--CC-CcChh---HHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVS-L--QP-GFSVT---KIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~-~--~~-~~~~~---~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
||.+|.+.+++| +....++.|+||..++-.... . .. ...+. ....+.++||+|+..|.||.++.+..|...
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~- 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM- 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT-
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC-
Confidence 899999999999 445578999999988743211 0 00 00110 001155589999999999998876665432
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcc
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGR 554 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~ 554 (1012)
..+..+|..++++|+.++++.+ .+|+++|.|++|..++.++...|..++|++..++ ..|+..
T Consensus 79 ----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~---~~d~~~ 140 (272)
T PF02129_consen 79 ----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG---WSDLYR 140 (272)
T ss_dssp ----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE----SBTCC
T ss_pred ----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc---CCcccc
Confidence 4556789999999999997755 6999999999999999999877888899999888 666543
No 68
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.11 E-value=9.8e-10 Score=115.79 Aligned_cols=190 Identities=16% Similarity=0.095 Sum_probs=107.0
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHH-HHHhCCeEEEEEcCCC---CCCCch---hHHhhhhcCCC-cchHhHHHHH--
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIV-FLRDFNGIYAIPNIRG---GGEYGE---RWHDGGRLLNK-QNVFDDFQCA-- 499 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~~G~~v~~~d~RG---~g~~g~---~~~~~~~~~~~-~~~~~D~~a~-- 499 (1012)
...|+||++||-.... ..+ ..... .+......+++++-.- ....|. .|.+....... ....+++..+
T Consensus 12 ~~~~lvi~LHG~G~~~--~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSE--DLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp T-SEEEEEE--TTS-H--HHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCceEEEEECCCCCCc--chh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 5678999999953322 111 11111 1112356666665321 111223 67653322111 1122233222
Q ss_pred -HHHHHHc---CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccC
Q psy1288 500 -AEYLIAS---GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLD 575 (1012)
Q Consensus 500 -~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~ 575 (1012)
+..+++. ..++++||++.|.|.||.+++.++.+.|..+.++++.+| +.
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG-------------------------~~--- 140 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSG-------------------------YL--- 140 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES-------------------------------
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeec-------------------------cc---
Confidence 2222221 238999999999999999999999999999999999988 10
Q ss_pred CCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeC
Q psy1288 576 TIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTAD 655 (1012)
Q Consensus 576 ~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~ 655 (1012)
|.. ..+. .... ...+.| +|++||.
T Consensus 141 -----------~~~----------------------~~~~-----------------~~~~-----~~~~~p-i~~~hG~ 164 (216)
T PF02230_consen 141 -----------PPE----------------------SELE-----------------DRPE-----ALAKTP-ILIIHGD 164 (216)
T ss_dssp -----------TTG----------------------CCCH-----------------CCHC-----CCCTS--EEEEEET
T ss_pred -----------ccc----------------------cccc-----------------cccc-----ccCCCc-EEEEecC
Confidence 000 0000 0001 012455 9999999
Q ss_pred CCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHh
Q psy1288 656 HDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 656 ~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~ 719 (1012)
.|+.+|+..+.+....|+++ +..+.+..|+++||.... +++.++.+||.++
T Consensus 165 ~D~vvp~~~~~~~~~~L~~~-------~~~v~~~~~~g~gH~i~~------~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 165 EDPVVPFEWAEKTAEFLKAA-------GANVEFHEYPGGGHEISP------EELRDLREFLEKH 215 (216)
T ss_dssp T-SSSTHHHHHHHHHHHHCT-------T-GEEEEEETT-SSS--H------HHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHhc-------CCCEEEEEcCCCCCCCCH------HHHHHHHHHHhhh
Confidence 99999999999999999998 789999999999998743 5667778899876
No 69
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.11 E-value=1.9e-09 Score=129.75 Aligned_cols=128 Identities=17% Similarity=0.162 Sum_probs=97.3
Q ss_pred ECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCC-CCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcC
Q psy1288 409 PSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSL-QPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLL 487 (1012)
Q Consensus 409 ~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 487 (1012)
++.||.+|.+.++.|++ .++.|+||++||...... ...+......++.++||+|+.+|+||.|.....+...
T Consensus 2 ~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~---- 74 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL---- 74 (550)
T ss_pred cCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec----
Confidence 46799999999999975 357899999997533211 0112222234566689999999999988765443211
Q ss_pred CCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 488 NKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 488 ~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.....+|+.++++|+.++.+.+ .+|+++|+|+||.+++.++...|+.+++++..++
T Consensus 75 -~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~ 130 (550)
T TIGR00976 75 -GSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEG 130 (550)
T ss_pred -CcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCc
Confidence 1346789999999999988766 6999999999999999999888889999999887
No 70
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.10 E-value=7.4e-09 Score=117.67 Aligned_cols=249 Identities=14% Similarity=0.141 Sum_probs=150.7
Q ss_pred CCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCC--CCCC--------C-ceEeeeEEECCCCcEEEEEE
Q psy1288 107 KYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNN--LSDD--------G-TVSLGSYSFSEDGKTLAYCL 175 (1012)
Q Consensus 107 ~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~--la~~--------g-~~~i~~~~~SPDGk~iAy~~ 175 (1012)
....++|+|++++|+++ ..||+++..++.+.+||.-.. +..+ + ...-..+.|||||++|||..
T Consensus 46 ~~~~~sP~g~~~~~v~~------~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~ 119 (353)
T PF00930_consen 46 QDAKWSPDGKYIAFVRD------NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLR 119 (353)
T ss_dssp SEEEE-SSSTEEEEEET------TEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEE
T ss_pred ccceeecCCCeeEEEec------CceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEE
Confidence 34455699999999984 369999888888888876320 0000 0 11235788999999999986
Q ss_pred eCC-----------------------------C--CceEEEEEEECCCCceeceeec------ceeeeeeEEeeCCCeEE
Q psy1288 176 SSS-----------------------------G--SDWTSMHFKDVATGKEYPEVLH------RLKFVSIAWTHDHKGVF 218 (1012)
Q Consensus 176 ~~~-----------------------------G--~~~~~L~v~dl~tg~~~~~t~~------~~~~~~~~WSpDG~~l~ 218 (1012)
-.. | +....|+|+|+++++....... ..-...+.|++|++.|+
T Consensus 120 ~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~ 199 (353)
T PF00930_consen 120 FDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLW 199 (353)
T ss_dssp EE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEE
T ss_pred ECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEE
Confidence 422 1 1235899999999986432222 22357899999999787
Q ss_pred EEec-CCCCCcc---cCC-CCCceEEEEeeccc--cceeeeee-ecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEe
Q psy1288 219 YSNQ-EPKSKSK---KHS-KKNRSSAYHLTVNV--APITSQYI-TNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTL 290 (1012)
Q Consensus 219 y~~~-~~~~~g~---~~~-~~~~~l~~~~~~~~--~~i~~~~~-s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l 290 (1012)
+... +...... .+. ....++++.+..+. .......+ .++++.+++++.+++ ..+||.++.+++. .+.|
T Consensus 200 ~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G-~~hly~~~~~~~~---~~~l 275 (353)
T PF00930_consen 200 VQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG-YRHLYLYDLDGGK---PRQL 275 (353)
T ss_dssp EEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS-SEEEEEEETTSSE---EEES
T ss_pred EEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC-CcEEEEEcccccc---eecc
Confidence 7753 3211000 010 01222333222111 11112223 488999999988654 7899999998765 3444
Q ss_pred eccCCCceeeeeEEe-cCCEEEEEEEcC--ceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCc
Q psy1288 291 IEENKDDVLDWATCV-ANDKLILSYIHH--VKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPT 366 (1012)
Q Consensus 291 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~--g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~ 366 (1012)
+ ..+..+.+...+. +++.|++....+ ...+||+++++++...+.|+...+....+++||+++.++..++++..|+
T Consensus 276 T-~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 276 T-SGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp S--SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEEEEEESSSSCE
T ss_pred c-cCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEEEEEcCCCCCC
Confidence 4 4445554433333 346888877763 4689999999624445677755332246788999999999999988874
No 71
>KOG4391|consensus
Probab=99.10 E-value=1.9e-09 Score=105.74 Aligned_cols=236 Identities=16% Similarity=0.173 Sum_probs=149.5
Q ss_pred CCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCch
Q psy1288 399 SLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGE 478 (1012)
Q Consensus 399 ~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 478 (1012)
.++..+++...++|..++.++.+.. ....|+++++|+..+... .+-+...-+....+..|+.+++||-|..-.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~-----E~S~pTlLyfh~NAGNmG--hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLS-----ESSRPTLLYFHANAGNMG--HRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecc-----cCCCceEEEEccCCCccc--chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 3566789999999999999998873 247899999999755332 222222233445699999999999764322
Q ss_pred hHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeee
Q psy1288 479 RWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIV 558 (1012)
Q Consensus 479 ~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~ 558 (1012)
.-.+.| ..-|..++++||..+...|..+|.++|.|.||..+..++....++..|++....
T Consensus 123 spsE~G-------L~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENT------------- 182 (300)
T KOG4391|consen 123 SPSEEG-------LKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENT------------- 182 (300)
T ss_pred Cccccc-------eeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeech-------------
Confidence 222221 134889999999999999999999999999999988888887788888887654
Q ss_pred ecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCC
Q psy1288 559 HTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGP 638 (1012)
Q Consensus 559 ~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p 638 (1012)
|.. +|.- .+|+... +.+ ++ ...| .++ -.+..+..+.
T Consensus 183 ------------F~S---Ip~~----~i~~v~p----~~~-k~---------i~~l-------c~k--n~~~S~~ki~-- 218 (300)
T KOG4391|consen 183 ------------FLS---IPHM----AIPLVFP----FPM-KY---------IPLL-------CYK--NKWLSYRKIG-- 218 (300)
T ss_pred ------------hcc---chhh----hhheecc----chh-hH---------HHHH-------HHH--hhhcchhhhc--
Confidence 211 1100 0111000 000 00 0000 000 0112222333
Q ss_pred CcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHH
Q psy1288 639 DELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLT 718 (1012)
Q Consensus 639 ~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~ 718 (1012)
..+.| +|++.|..|..||+.+-.+++..--.. ...+..||++.|.-.-- ....+..+-+||.+
T Consensus 219 ----~~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~---------~Krl~eFP~gtHNDT~i---~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 219 ----QCRMP-FLFISGLKDELVPPVMMRQLYELCPSR---------TKRLAEFPDGTHNDTWI---CDGYFQAIEDFLAE 281 (300)
T ss_pred ----cccCc-eEEeecCccccCCcHHHHHHHHhCchh---------hhhheeCCCCccCceEE---eccHHHHHHHHHHH
Confidence 46778 999999999999998876666543322 34688999999964221 11233344478887
Q ss_pred hCCC
Q psy1288 719 SGPV 722 (1012)
Q Consensus 719 ~l~~ 722 (1012)
....
T Consensus 282 ~~~~ 285 (300)
T KOG4391|consen 282 VVKS 285 (300)
T ss_pred hccC
Confidence 7543
No 72
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.04 E-value=1.8e-07 Score=101.36 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=74.5
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCC--CCceEEEEEEEC
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSS--GSDWTSMHFKDV 190 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~--G~~~~~L~v~dl 190 (1012)
..|+++.|+..+ .||..++..++.+.|+. +..-+..+++||||++|||+.-.- +....+||+++.
T Consensus 48 I~GD~IiFt~~D------dlWe~slk~g~~~ritS-------~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~ 114 (668)
T COG4946 48 IYGDRIIFTCCD------DLWEYSLKDGKPLRITS-------GLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPS 114 (668)
T ss_pred ccCcEEEEEech------HHHHhhhccCCeeEEec-------ccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeC
Confidence 459999998754 38888888898898887 445667899999999999954322 233458999999
Q ss_pred CCCceeceeecceeeee-eEEeeCCCeEEEEe
Q psy1288 191 ATGKEYPEVLHRLKFVS-IAWTHDHKGVFYSN 221 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~-~~WSpDG~~l~y~~ 221 (1012)
++|+.++.|.-+..++. +.|+|||+-|+++.
T Consensus 115 e~Ge~kRiTyfGr~fT~VaG~~~dg~iiV~TD 146 (668)
T COG4946 115 EDGEAKRITYFGRRFTRVAGWIPDGEIIVSTD 146 (668)
T ss_pred CCCcEEEEEEeccccceeeccCCCCCEEEEec
Confidence 99999998876655544 57999999888774
No 73
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.04 E-value=7e-09 Score=116.66 Aligned_cols=133 Identities=15% Similarity=0.030 Sum_probs=79.3
Q ss_pred EECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCC-----------------------CcChhHHHHHHhCCeE
Q psy1288 408 YPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQP-----------------------GFSVTKIVFLRDFNGI 464 (1012)
Q Consensus 408 ~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-----------------------~~~~~~~~~l~~~G~~ 464 (1012)
+.+.||..|....+.|+ .+..+|+++||-.+..... .|...+...|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 45679999988887764 2456999999954333210 0223456677778999
Q ss_pred EEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHc------------------CCCCCCcEEEEecChHHHHH
Q psy1288 465 YAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIAS------------------GYTQSSRLAIQGGSNGGLLT 526 (1012)
Q Consensus 465 v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~------------------~~~d~~~i~i~G~S~GG~l~ 526 (1012)
|+..|.||+|.....-...+........++|+...++.+.+. .+-....++++||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 999999998854321000000001111224444444443321 11113468999999999999
Q ss_pred HHHHhhCCC--------ceeEEEEccC
Q psy1288 527 AACINQRPD--------LFGAAIVQVG 545 (1012)
Q Consensus 527 ~~~~~~~p~--------~f~a~v~~~~ 545 (1012)
...+...++ .+.++|..+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~ 183 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSG 183 (332)
T ss_pred HHHHHHhccccccccccccceEEEecc
Confidence 887754432 4677776666
No 74
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.03 E-value=1.7e-09 Score=111.26 Aligned_cols=126 Identities=20% Similarity=0.191 Sum_probs=82.3
Q ss_pred CCceEEEEEEEeCCCCCCCCC-cEEEEEcCCCCCCCCCCc---C-hhHHHHH-HhCCeEEEEEcCCCCCCCchhHHhhhh
Q psy1288 412 DGTKIPMFILSRKGAQLDGNN-PCILYGYGGFAVSLQPGF---S-VTKIVFL-RDFNGIYAIPNIRGGGEYGERWHDGGR 485 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~-P~vv~~hGg~~~~~~~~~---~-~~~~~~l-~~~G~~v~~~d~RG~g~~g~~~~~~~~ 485 (1012)
-|.+|.+.++.|+++.+++++ |+++++||+........- + .....|+ .+-++.|+.|.+ ...+.+...
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy------~~if~d~e~ 243 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQY------NPIFADSEE 243 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccc------ccccccccc
Confidence 588999999999999999998 999999998654432210 0 0011111 112344555542 122211111
Q ss_pred cCCCcchHhHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 486 LLNKQNVFDDFQCAAE-YLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 486 ~~~~~~~~~D~~a~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.......-.+..+. -+.++..+|.+||.+.|.|.||+.+++++.+.|+.|+|++..+|
T Consensus 244 --~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 244 --KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred --ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 11111222333343 55566779999999999999999999999999999999999988
No 75
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.00 E-value=4.8e-09 Score=102.75 Aligned_cols=145 Identities=18% Similarity=0.218 Sum_probs=98.9
Q ss_pred EEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCc
Q psy1288 434 CILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSR 513 (1012)
Q Consensus 434 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~ 513 (1012)
+||++||..... ..|. .....++++||.|+.+|+++.+..... .+....++++.... .++++
T Consensus 1 ~vv~~HG~~~~~--~~~~-~~~~~l~~~G~~v~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWGGSR--RDYQ-PLAEALAEQGYAVVAFDYPGHGDSDGA--------------DAVERVLADIRAGY-PDPDR 62 (145)
T ss_dssp EEEEECTTTTTT--HHHH-HHHHHHHHTTEEEEEESCTTSTTSHHS--------------HHHHHHHHHHHHHH-CTCCE
T ss_pred CEEEECCCCCCH--HHHH-HHHHHHHHCCCEEEEEecCCCCccchh--------------HHHHHHHHHHHhhc-CCCCc
Confidence 478999986532 2233 334556667999999999987764111 13333444432221 28899
Q ss_pred EEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhh
Q psy1288 514 LAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVH 593 (1012)
Q Consensus 514 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~ 593 (1012)
|+++|+|+||.++..++.+. ..++++|+..+ +
T Consensus 63 i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~-------------------------~---------------------- 94 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAARN-PRVKAVVLLSP-------------------------Y---------------------- 94 (145)
T ss_dssp EEEEEETHHHHHHHHHHHHS-TTESEEEEESE-------------------------S----------------------
T ss_pred EEEEEEccCcHHHHHHhhhc-cceeEEEEecC-------------------------c----------------------
Confidence 99999999999999998887 67888888766 0
Q ss_pred hhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHH
Q psy1288 594 KVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQ 673 (1012)
Q Consensus 594 ~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~ 673 (1012)
+. .+. + ...+.| +|++||.+|..+++....++++++.
T Consensus 95 -----------------------~~-~~~------------~------~~~~~p-v~~i~g~~D~~~~~~~~~~~~~~~~ 131 (145)
T PF12695_consen 95 -----------------------PD-SED------------L------AKIRIP-VLFIHGENDPLVPPEQVRRLYEALP 131 (145)
T ss_dssp -----------------------SG-CHH------------H------TTTTSE-EEEEEETT-SSSHHHHHHHHHHHHC
T ss_pred -----------------------cc-hhh------------h------hccCCc-EEEEEECCCCcCCHHHHHHHHHHcC
Confidence 00 000 0 124456 9999999999998888887777665
Q ss_pred hhhccCCCCCCcEEEEEeCCCCCC
Q psy1288 674 EKLRDYPHQTNPLLIRIETKAGHG 697 (1012)
Q Consensus 674 ~~~~~~~~~~~~~~l~~~p~~gHg 697 (1012)
.+..+++.++++|+
T Consensus 132 ----------~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 132 ----------GPKELYIIPGAGHF 145 (145)
T ss_dssp ----------SSEEEEEETTS-TT
T ss_pred ----------CCcEEEEeCCCcCc
Confidence 35688999999995
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.96 E-value=3.2e-08 Score=105.10 Aligned_cols=271 Identities=18% Similarity=0.134 Sum_probs=146.0
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
+..+..+||..+-.....++. +...|+||..||-.+...++ |.......+.++||.++++|.||.++--.. .
T Consensus 51 re~v~~pdg~~~~ldw~~~p~---~~~~P~vVl~HGL~G~s~s~-y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~----~ 122 (345)
T COG0429 51 RERLETPDGGFIDLDWSEDPR---AAKKPLVVLFHGLEGSSNSP-YARGLMRALSRRGWLVVVFHFRGCSGEANT----S 122 (345)
T ss_pred eEEEEcCCCCEEEEeeccCcc---ccCCceEEEEeccCCCCcCH-HHHHHHHHHHhcCCeEEEEecccccCCccc----C
Confidence 334566777666544433222 35569999999977766666 655566677778999999999998753110 1
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHH-HHHHHHhhCCC--ceeEEEEccCCCccccCcceeeeecc
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGL-LTAACINQRPD--LFGAAIVQVGNPEISDCGRWLIVHTM 561 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~-l~~~~~~~~p~--~f~a~v~~~~~~~i~d~~~~~~~~~~ 561 (1012)
.........+|+..+++++.+... +.++.++|.|.||. ++..+....-+ +-++++...| .|+. ..++-|
T Consensus 123 p~~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P----~Dl~--~~~~~l 194 (345)
T COG0429 123 PRLYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAP----FDLE--ACAYRL 194 (345)
T ss_pred cceecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCH----HHHH--HHHHHh
Confidence 111112234799999999988643 67899999999994 44444433212 2233333333 1110 000000
Q ss_pred ccccc-Cccc-----c----c--ccCCCCcccccCCCCcch-hh-hhhhhhhhccccccccccccccCCCCChHHHHHHH
Q psy1288 562 KDCKN-NMFH-----F----C--DLDTIPDRKIEGKLPLTQ-VV-HKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLL 627 (1012)
Q Consensus 562 ~~~~~-~~~~-----~----~--dl~~~~~~~~~~~~plt~-~~-~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~ 627 (1012)
..-.. .+++ + + .+..+ .+++|.+. .. ..+.....|+.... ...+|- ++..++++
T Consensus 195 ~~~~s~~ly~r~l~~~L~~~~~~kl~~l-----~~~~p~~~~~~ik~~~ti~eFD~~~T----ap~~Gf---~da~dYYr 262 (345)
T COG0429 195 DSGFSLRLYSRYLLRNLKRNAARKLKEL-----EPSLPGTVLAAIKRCRTIREFDDLLT----APLHGF---ADAEDYYR 262 (345)
T ss_pred cCchhhhhhHHHHHHHHHHHHHHHHHhc-----CcccCcHHHHHHHhhchHHhccceee----ecccCC---CcHHHHHH
Confidence 00000 0000 0 0 00000 12344331 00 00011111111000 011232 24567899
Q ss_pred cCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHh-hhccCCCCCCcEEEEEeCCCCCC-CCCcc--c
Q psy1288 628 GYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQE-KLRDYPHQTNPLLIRIETKAGHG-GGKPT--T 703 (1012)
Q Consensus 628 ~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~-~~~~~~~~~~~~~l~~~p~~gHg-~~~~~--~ 703 (1012)
..|++..++ +++.| +||||..+||.+++..-- ..+. . +..+++..-..|||- |-... .
T Consensus 263 ~aSs~~~L~------~Ir~P-tLii~A~DDP~~~~~~iP----~~~~~~-------np~v~l~~t~~GGHvGfl~~~~~~ 324 (345)
T COG0429 263 QASSLPLLP------KIRKP-TLIINAKDDPFMPPEVIP----KLQEML-------NPNVLLQLTEHGGHVGFLGGKLLH 324 (345)
T ss_pred hcccccccc------ccccc-eEEEecCCCCCCChhhCC----cchhcC-------CCceEEEeecCCceEEeccCcccc
Confidence 999998887 79999 999999999998864321 1222 2 556888888999994 32211 1
Q ss_pred cchhhhhHHHHHHHHhCC
Q psy1288 704 KQFPLTIPVIYFYLTSGP 721 (1012)
Q Consensus 704 ~~~~~~~~~~~fl~~~l~ 721 (1012)
...-....+.+||+..++
T Consensus 325 ~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 325 PQMWLEQRILDWLDPFLE 342 (345)
T ss_pred chhhHHHHHHHHHHHHHh
Confidence 111233456677776543
No 77
>PLN02511 hydrolase
Probab=98.95 E-value=5.4e-08 Score=111.83 Aligned_cols=136 Identities=13% Similarity=0.110 Sum_probs=87.6
Q ss_pred eEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHh
Q psy1288 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHD 482 (1012)
Q Consensus 403 ~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 482 (1012)
.++..+..+||..+....+.+.........|+||++||..+.... .|.......+.++||.|+++|.||.|+....
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~-~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~--- 146 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDD-SYVRHMLLRARSKGWRVVVFNSRGCADSPVT--- 146 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCC-HHHHHHHHHHHHCCCEEEEEecCCCCCCCCC---
Confidence 455567778998887544332211122346899999997665432 2322223334457999999999998754211
Q ss_pred hhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCc--eeEEEEccC
Q psy1288 483 GGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDL--FGAAIVQVG 545 (1012)
Q Consensus 483 ~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~~ 545 (1012)
..........+|+..+++++..+- ...++.++|+|+||.+++..+.++|+. +.++++.++
T Consensus 147 -~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~ 208 (388)
T PLN02511 147 -TPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCN 208 (388)
T ss_pred -CcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECC
Confidence 011112234678988999887652 235799999999999999999888875 566555543
No 78
>COG0400 Predicted esterase [General function prediction only]
Probab=98.92 E-value=2.7e-08 Score=102.03 Aligned_cols=124 Identities=23% Similarity=0.183 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCccccccc
Q psy1288 495 DFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDL 574 (1012)
Q Consensus 495 D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl 574 (1012)
.+.+.++.+..+..++++++.+.|.|+|+.+++.++.++|++|++++...| +
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g-------------------------~--- 133 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSG-------------------------M--- 133 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCC-------------------------c---
Confidence 344445555566668899999999999999999999999999999999888 1
Q ss_pred CCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEee
Q psy1288 575 DTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTA 654 (1012)
Q Consensus 575 ~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG 654 (1012)
+|+.. . +..+ ....| +|++||
T Consensus 134 -----------~~~~~-----------------------~----------------~~~~--------~~~~p-ill~hG 154 (207)
T COG0400 134 -----------LPLEP-----------------------E----------------LLPD--------LAGTP-ILLSHG 154 (207)
T ss_pred -----------CCCCC-----------------------c----------------cccc--------cCCCe-EEEecc
Confidence 01000 0 0001 23445 999999
Q ss_pred CCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHh
Q psy1288 655 DHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 655 ~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~ 719 (1012)
..|+.||...+.++...|++. +..+....++ +||.... +++..+.+|+...
T Consensus 155 ~~Dpvvp~~~~~~l~~~l~~~-------g~~v~~~~~~-~GH~i~~------e~~~~~~~wl~~~ 205 (207)
T COG0400 155 TEDPVVPLALAEALAEYLTAS-------GADVEVRWHE-GGHEIPP------EELEAARSWLANT 205 (207)
T ss_pred CcCCccCHHHHHHHHHHHHHc-------CCCEEEEEec-CCCcCCH------HHHHHHHHHHHhc
Confidence 999999999999999999998 9999999998 9998764 4555566787654
No 79
>PRK10985 putative hydrolase; Provisional
Probab=98.91 E-value=3.1e-08 Score=111.29 Aligned_cols=132 Identities=14% Similarity=0.068 Sum_probs=83.3
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
+..+..+||..+......... .....|+||++||..+.... .+.......|.++||.|+++|+||.++.......
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~-~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~-- 107 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNS-PYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR-- 107 (324)
T ss_pred eeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcC-HHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc--
Confidence 344667899877543321111 23457899999997654322 2322334566778999999999997643211100
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCc--eeEEEEccC
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDL--FGAAIVQVG 545 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~~ 545 (1012)
.......+|+..+++++.++- ...++.++|+|+||.+++..+.++++. +.+++..++
T Consensus 108 --~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~ 166 (324)
T PRK10985 108 --IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSA 166 (324)
T ss_pred --eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcC
Confidence 111223678888888888752 235799999999999877777665432 666666655
No 80
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.89 E-value=2.5e-08 Score=110.98 Aligned_cols=133 Identities=17% Similarity=0.205 Sum_probs=88.8
Q ss_pred CCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchh
Q psy1288 400 LFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGER 479 (1012)
Q Consensus 400 ~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 479 (1012)
.+..+++.++-. |+.|++++..|++ +++.|+||.+-|--... ..+-..+...+..+|++++++|..|.|... .
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~~---~~p~P~VIv~gGlDs~q--eD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-~ 234 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPSG---EKPYPTVIVCGGLDSLQ--EDLYRLFRDYLAPRGIAMLTVDMPGQGESP-K 234 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESSS---SS-EEEEEEE--TTS-G--GGGHHHHHCCCHHCT-EEEEE--TTSGGGT-T
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCCC---CCCCCEEEEeCCcchhH--HHHHHHHHHHHHhCCCEEEEEccCCCcccc-c
Confidence 345778877765 5899999999884 57889888865543222 222212223455689999999999987531 1
Q ss_pred HHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 480 WHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 480 ~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
|- .......-..++++||...+++|.+||+++|.|+||+.+.+++..++++++++|+..+
T Consensus 235 ~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga 294 (411)
T PF06500_consen 235 WP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGA 294 (411)
T ss_dssp T-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES-
T ss_pred CC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCc
Confidence 11 0011112345778999999999999999999999999999998777889999998866
No 81
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.84 E-value=8e-09 Score=112.61 Aligned_cols=141 Identities=21% Similarity=0.227 Sum_probs=87.5
Q ss_pred CCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCC------------CCCCc---ChhHHHHHHhCCe
Q psy1288 399 SLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVS------------LQPGF---SVTKIVFLRDFNG 463 (1012)
Q Consensus 399 ~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~------------~~~~~---~~~~~~~l~~~G~ 463 (1012)
++|..|++.+...++..++++++.|++. .++.|.||.+||-.+.. ....+ .......|+++||
T Consensus 84 dGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GY 161 (390)
T PF12715_consen 84 DGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGY 161 (390)
T ss_dssp TTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTS
T ss_pred CCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCC
Confidence 4578889999888999999999999985 68899999998832111 00011 1123456778899
Q ss_pred EEEEEcCCCCCCCchhH-----------------HhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHH
Q psy1288 464 IYAIPNIRGGGEYGERW-----------------HDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLT 526 (1012)
Q Consensus 464 ~v~~~d~RG~g~~g~~~-----------------~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~ 526 (1012)
+|+++|..|-|+.+..- ...|....+...+ |...+++||..++.+|++||+++|+|+||+.+
T Consensus 162 Vvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~-ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a 240 (390)
T PF12715_consen 162 VVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAW-DDMRALDFLASLPEVDPDRIGCMGFSMGGYRA 240 (390)
T ss_dssp EEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHH-HHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHH
T ss_pred EEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHH-HHHHHHHHHhcCcccCccceEEEeecccHHHH
Confidence 99999999877654311 0111111122233 44568999999999999999999999999999
Q ss_pred HHHHhhCCCceeEEEEc
Q psy1288 527 AACINQRPDLFGAAIVQ 543 (1012)
Q Consensus 527 ~~~~~~~p~~f~a~v~~ 543 (1012)
+.+++.. +++++.+..
T Consensus 241 ~~LaALD-dRIka~v~~ 256 (390)
T PF12715_consen 241 WWLAALD-DRIKATVAN 256 (390)
T ss_dssp HHHHHH--TT--EEEEE
T ss_pred HHHHHcc-hhhHhHhhh
Confidence 8888774 566776654
No 82
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.83 E-value=8.2e-08 Score=103.47 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=68.2
Q ss_pred CCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 431 NNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
+.|+||++||..+... .|.. ....+. +||.|+.+|.||.|...... .....++|....+..+++. .+
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~ 78 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAP-QLDVLT-QRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LN 78 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHH-HHHHHH-hccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hC
Confidence 4688999999755432 2322 345566 48999999999987543211 1112344444444434433 24
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..++.++|+|+||.+++.++.+.|+.++++|...+
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~ 113 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINA 113 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecC
Confidence 56899999999999999999888988888777655
No 83
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.83 E-value=2.5e-07 Score=101.31 Aligned_cols=128 Identities=11% Similarity=0.030 Sum_probs=84.7
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCC-CcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhh
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQP-GFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDG 483 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 483 (1012)
.+.+.. +|..|.+++..|.+. +.+.+|++|||....... .........|+++||.|+.+|+||.|.....
T Consensus 4 ~~~~~~-~~~~l~g~~~~p~~~----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~---- 74 (274)
T TIGR03100 4 ALTFSC-EGETLVGVLHIPGAS----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGE---- 74 (274)
T ss_pred eEEEEc-CCcEEEEEEEcCCCC----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCC----
Confidence 344543 578899999988642 235677778775433211 1112234566668999999999998854211
Q ss_pred hhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 484 GRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 484 ~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.........|+.++++++.+... ..+++.++|+|+||++++.++.. +..++++|...|
T Consensus 75 --~~~~~~~~~d~~~~~~~l~~~~~-g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p 132 (274)
T TIGR03100 75 --NLGFEGIDADIAAAIDAFREAAP-HLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNP 132 (274)
T ss_pred --CCCHHHHHHHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECC
Confidence 01112335788889988876521 23679999999999998887654 467888888876
No 84
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.81 E-value=5e-08 Score=107.40 Aligned_cols=102 Identities=15% Similarity=0.052 Sum_probs=64.7
Q ss_pred CcEEEEEcCCCCCCCCCCcCh---hHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSV---TKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY 508 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~---~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~ 508 (1012)
.|.||++||...... .|.. .... +.+.||.|+++|.||.|........ . .......+|+.+.++.
T Consensus 30 ~~~ivllHG~~~~~~--~~~~~~~~~~~-l~~~~~~vi~~D~~G~G~S~~~~~~--~-~~~~~~~~~l~~~l~~------ 97 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG--GWSNYYRNIGP-FVDAGYRVILKDSPGFNKSDAVVMD--E-QRGLVNARAVKGLMDA------ 97 (282)
T ss_pred CCeEEEECCCCCchh--hHHHHHHHHHH-HHhCCCEEEEECCCCCCCCCCCcCc--c-cccchhHHHHHHHHHH------
Confidence 467999999643322 2321 1223 3345999999999998754221100 0 0000112333333322
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+.+++.++|+|+||.++..++.++|++++++|...+
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 134 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGP 134 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECC
Confidence 2457899999999999999999999999999888766
No 85
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=2.5e-07 Score=96.67 Aligned_cols=127 Identities=17% Similarity=0.192 Sum_probs=91.4
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhc-----
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRL----- 486 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~----- 486 (1012)
.|.+..++++.|.+.. .+.|+||++||+.+......-...+-.+.++.|+.|+.+| ++.+.|...+..
T Consensus 43 ~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~p 115 (312)
T COG3509 43 NGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFGP 115 (312)
T ss_pred CCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCCc
Confidence 5777889999999864 3449999999986543221112223345556699999994 233444322222
Q ss_pred ---CCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 487 ---LNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 487 ---~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+..++..+.+.+..|+.+.-+||.||+|.|.|+||.|+.+++..+|++|.++...++
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg 177 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAG 177 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeec
Confidence 23344556667777778888889999999999999999999999999999998887777
No 86
>PLN02872 triacylglycerol lipase
Probab=98.77 E-value=7.7e-08 Score=109.70 Aligned_cols=144 Identities=19% Similarity=0.212 Sum_probs=90.8
Q ss_pred CCCCceEEEEEECCCCceEEEEEEEeCCC-CCCCCCcEEEEEcCCCCCCCCCCcC---hhHHHHHHhCCeEEEEEcCCCC
Q psy1288 398 PSLFETKQVFYPSKDGTKIPMFILSRKGA-QLDGNNPCILYGYGGFAVSLQPGFS---VTKIVFLRDFNGIYAIPNIRGG 473 (1012)
Q Consensus 398 ~~~~~~~~v~~~s~DG~~i~~~l~~p~~~-~~~~~~P~vv~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~d~RG~ 473 (1012)
..+|.+|+..++++||..|...-+.+... ....+.|.|++.||.......+... ......|+++||.|+.+|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 34678899999999999887765533221 1123467899999976544432221 1223356678999999999997
Q ss_pred CC-CchhHHhhh-hcCCC----cchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCC---ceeEEEEcc
Q psy1288 474 GE-YGERWHDGG-RLLNK----QNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPD---LFGAAIVQV 544 (1012)
Q Consensus 474 g~-~g~~~~~~~-~~~~~----~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~ 544 (1012)
+. .|....... ...|. .....|+.+.++++.+.. .+++.++|||+||.+++.++ .+|+ .++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 53 232211111 11011 122358899999987642 36899999999999988655 4566 355555555
Q ss_pred C
Q psy1288 545 G 545 (1012)
Q Consensus 545 ~ 545 (1012)
|
T Consensus 195 P 195 (395)
T PLN02872 195 P 195 (395)
T ss_pred c
Confidence 5
No 87
>PLN00021 chlorophyllase
Probab=98.77 E-value=2.9e-07 Score=101.74 Aligned_cols=115 Identities=18% Similarity=0.211 Sum_probs=79.8
Q ss_pred ceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchH
Q psy1288 414 TKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVF 493 (1012)
Q Consensus 414 ~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 493 (1012)
..+++.++.|.. .++.|+|+++||..... ..|. .....|+++||+|+.+|++|.+.. .....+
T Consensus 37 ~~~p~~v~~P~~---~g~~PvVv~lHG~~~~~--~~y~-~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 37 PPKPLLVATPSE---AGTYPVLLFLHGYLLYN--SFYS-QLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCceEEEEeCCC---CCCCCEEEEECCCCCCc--ccHH-HHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 457888999975 46789999999975432 1232 345567778999999998873211 011234
Q ss_pred hHHHHHHHHHHHc--------CCCCCCcEEEEecChHHHHHHHHHhhCCC-----ceeEEEEccC
Q psy1288 494 DDFQCAAEYLIAS--------GYTQSSRLAIQGGSNGGLLTAACINQRPD-----LFGAAIVQVG 545 (1012)
Q Consensus 494 ~D~~a~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~~ 545 (1012)
+|..+.++|+.+. ...++++++++|||+||.+++.++..+++ .+.+++...|
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecc
Confidence 4556666666642 23577899999999999999999988764 4566666655
No 88
>PLN02442 S-formylglutathione hydrolase
Probab=98.76 E-value=1.6e-08 Score=111.14 Aligned_cols=110 Identities=12% Similarity=0.027 Sum_probs=77.2
Q ss_pred cCCccccccCccceeeeccccccccchh-----hhcccccCCCCCCCCCCCcccCCCCCChhhhhHhHcCCCCCCCCCCC
Q psy1288 734 DGSENVRNQDQKLYYHYLGTDQKDDILI-----AEVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPN 808 (1012)
Q Consensus 734 GgS~g~~~~~~~~~~~~~~~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Sp~~~v~~~~ 808 (1012)
|.|.| ++.++.....+|++|. +|++|+..... ........+|.+. ++++.+.+.+|+.++.
T Consensus 149 G~S~G-------G~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~--~~~~~~d~~~~~~~~~--- 214 (283)
T PLN02442 149 GHSMG-------GHGALTIYLKNPDKYKSVSAFAPIANPINCPW--GQKAFTNYLGSDK--ADWEEYDATELVSKFN--- 214 (283)
T ss_pred EEChh-------HHHHHHHHHhCchhEEEEEEECCccCcccCch--hhHHHHHHcCCCh--hhHHHcChhhhhhhcc---
Confidence 88888 5555554445566554 35655432100 0000112345542 3466667888888887
Q ss_pred CCCCCCCCceEEEcccCCCCCCC-cchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 809 ELKGKQYPATLLMTADHDDRVSP-VHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 809 ~~~~~~~~p~l~~~g~~D~rv~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+..+|+||+||++|.+||. .++..|+++||+.|+ ++.+.++|+++|++.
T Consensus 215 ----~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~-------~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 215 ----DVSATILIDQGEADKFLKEQLLPENFEEACKEAGA-------PVTLRLQPGYDHSYF 264 (283)
T ss_pred ----ccCCCEEEEECCCCccccccccHHHHHHHHHHcCC-------CeEEEEeCCCCccHH
Confidence 7789999999999999997 479999999999988 999999999999875
No 89
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.72 E-value=6.3e-07 Score=99.84 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=78.8
Q ss_pred eEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHh
Q psy1288 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHD 482 (1012)
Q Consensus 403 ~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 482 (1012)
.+.+.+..-||.++..... ..+ +...|.||++||...... .|.. ....|.++||.|+++|.||.|......
T Consensus 21 ~~~~~~~~~~~~~~~i~y~-~~G---~~~~~~lvliHG~~~~~~--~w~~-~~~~L~~~gy~vi~~Dl~G~G~S~~~~-- 91 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYV-DEG---PADGPPVLLLHGEPSWSY--LYRK-MIPILAAAGHRVIAPDLIGFGRSDKPT-- 91 (302)
T ss_pred ceeEeecCCCCceEEEEEE-ecC---CCCCCEEEEECCCCCchh--hHHH-HHHHHHhCCCEEEEECCCCCCCCCCCC--
Confidence 3445555545665442222 222 112468999999753322 3443 344566569999999999987532110
Q ss_pred hhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 483 GGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 483 ~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
......+++....+..+++. .+.+++.++|||+||.++..++.++|+++.+++...+
T Consensus 92 ----~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 92 ----RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred ----CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 00112344544444444443 2345799999999999999999999999988887754
No 90
>PRK10566 esterase; Provisional
Probab=98.72 E-value=2.7e-08 Score=107.41 Aligned_cols=62 Identities=24% Similarity=0.236 Sum_probs=51.0
Q ss_pred hHcCCCCCCCCCCCCCCCCC-CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 795 LLGYSPLHNIQGPNELKGKQ-YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 795 ~~~~Sp~~~v~~~~~~~~~~-~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+..+++...+. ++ ..|+|++||++|..||+.++++++++|+.+|++ ..+.++.++++||++.
T Consensus 172 ~~~~~~~~~~~-------~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~-----~~~~~~~~~~~~H~~~ 234 (249)
T PRK10566 172 LAEWEVTHQLE-------QLADRPLLLWHGLADDVVPAAESLRLQQALRERGLD-----KNLTCLWEPGVRHRIT 234 (249)
T ss_pred HhhcChhhhhh-------hcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCC-----cceEEEecCCCCCccC
Confidence 34455555555 55 589999999999999999999999999998871 1489999999999985
No 91
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.71 E-value=1.6e-07 Score=100.42 Aligned_cols=101 Identities=17% Similarity=0.109 Sum_probs=68.7
Q ss_pred CCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 431 NNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
..|++|++||..... ..|.. ....|. .||.|+.+|.||.|..... .....+.++...+..+++. .+
T Consensus 12 ~~~~li~~hg~~~~~--~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~--~~ 77 (251)
T TIGR02427 12 GAPVLVFINSLGTDL--RMWDP-VLPALT-PDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDH--LG 77 (251)
T ss_pred CCCeEEEEcCcccch--hhHHH-HHHHhh-cccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHH--hC
Confidence 468899999854332 23333 345566 5999999999998754211 1122455555555555543 23
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+++.++|+|+||.+++.++.+.|+.+.+++...+
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~ 112 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNT 112 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccC
Confidence 46899999999999999999888888887776654
No 92
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.69 E-value=2e-07 Score=90.98 Aligned_cols=100 Identities=18% Similarity=0.094 Sum_probs=69.1
Q ss_pred CCCcEEEEEcCCC--CCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcC
Q psy1288 430 GNNPCILYGYGGF--AVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASG 507 (1012)
Q Consensus 430 ~~~P~vv~~hGg~--~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~ 507 (1012)
...|+.|.+|--+ +..+...-.......+.++|+.++.+|+||-|.....| +.+....+|..++++|+.++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~f------D~GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEF------DNGIGELEDAAAALDWLQARH 99 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcc------cCCcchHHHHHHHHHHHHhhC
Confidence 4567777776532 11221111223345566789999999999987654443 456677899999999999885
Q ss_pred CCCCCcEEEEecChHHHHHHHHHhhCCCc
Q psy1288 508 YTQSSRLAIQGGSNGGLLTAACINQRPDL 536 (1012)
Q Consensus 508 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~ 536 (1012)
.-.+ ...+.|.|+|+++++.++.+.|+.
T Consensus 100 p~s~-~~~l~GfSFGa~Ia~~la~r~~e~ 127 (210)
T COG2945 100 PDSA-SCWLAGFSFGAYIAMQLAMRRPEI 127 (210)
T ss_pred CCch-hhhhcccchHHHHHHHHHHhcccc
Confidence 4322 246789999999999998887653
No 93
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.67 E-value=4.5e-07 Score=104.42 Aligned_cols=136 Identities=17% Similarity=0.220 Sum_probs=102.1
Q ss_pred CceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc--ChhHH---HHHHhCCeEEEEEcCCCCCC
Q psy1288 401 FETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF--SVTKI---VFLRDFNGIYAIPNIRGGGE 475 (1012)
Q Consensus 401 ~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~--~~~~~---~~l~~~G~~v~~~d~RG~g~ 475 (1012)
+..+.+.++-+||++|..-+++|++ .++.|+++..+-.+-......+ ..... .+++.+||+|+..|.||.++
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa~---~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPAG---AGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccCC---CCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 5567788999999999999999997 4889999988733222211111 11111 24555799999999999887
Q ss_pred CchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 476 YGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 476 ~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
....+.... . ...+|-.+.++|+.++++.+ .+|+.+|.|++|+..+++++..|.-.+|++...+
T Consensus 94 SeG~~~~~~----~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 94 SEGVFDPES----S-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred CCcccceec----c-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 655543221 1 35678889999999999976 6899999999999999988887777788888877
No 94
>PRK11071 esterase YqiA; Provisional
Probab=98.67 E-value=6.7e-07 Score=91.90 Aligned_cols=87 Identities=18% Similarity=0.061 Sum_probs=56.2
Q ss_pred cEEEEEcCCCCCCCCCCcChh-HHHHHHh--CCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVT-KIVFLRD--FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYT 509 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~-~~~~l~~--~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~ 509 (1012)
|.||++||-.+... .|... ...++.+ .++.|+.+|.+|.+ ++....+..++++-
T Consensus 2 p~illlHGf~ss~~--~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSSPR--SAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCCcc--hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--
Confidence 67999999654332 23322 2344543 27999999999742 12333444555442
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+++.++|+|+||.+++.++.++|. + +|...|
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~ 91 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNP 91 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECC
Confidence 23579999999999999999998883 3 344544
No 95
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.63 E-value=1.9e-06 Score=92.83 Aligned_cols=129 Identities=12% Similarity=0.041 Sum_probs=85.9
Q ss_pred EEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCC-cChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 406 VFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPG-FSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 406 v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
+++.++.|. +.++++.|.+ .++.|+||++||......... .-......|+++||.|+.+|+||.|........
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~---~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-- 76 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVA---VGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-- 76 (266)
T ss_pred EEecCCCCc-EEEEEecCCC---CCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc--
Confidence 455666665 4456665654 244689999999543221111 111223456668999999999998754222111
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.......+|+..+++++.+.+ ..+++++|+|+||.+++.++.++|+.+.++|...|
T Consensus 77 --~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P 132 (266)
T TIGR03101 77 --ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQP 132 (266)
T ss_pred --CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEecc
Confidence 011123478888888887653 46899999999999999999888999988888866
No 96
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.63 E-value=1.3e-06 Score=97.39 Aligned_cols=120 Identities=15% Similarity=0.102 Sum_probs=75.3
Q ss_pred EECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcC
Q psy1288 408 YPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLL 487 (1012)
Q Consensus 408 ~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 487 (1012)
+...||.+|.+....+ ...+.||++||+++.... ......+...+|.|+.+|.||.|..... ..
T Consensus 9 ~~~~~~~~l~y~~~g~------~~~~~lvllHG~~~~~~~----~~~~~~~~~~~~~vi~~D~~G~G~S~~~------~~ 72 (306)
T TIGR01249 9 LNVSDNHQLYYEQSGN------PDGKPVVFLHGGPGSGTD----PGCRRFFDPETYRIVLFDQRGCGKSTPH------AC 72 (306)
T ss_pred EEcCCCcEEEEEECcC------CCCCEEEEECCCCCCCCC----HHHHhccCccCCEEEEECCCCCCCCCCC------CC
Confidence 4455787776644311 113467889998654321 1122233335899999999997743211 00
Q ss_pred CCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 488 NKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 488 ~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.......|+.+.+..+.+. ...+++.++|+|+||.+++.++.++|++++++|....
T Consensus 73 ~~~~~~~~~~~dl~~l~~~--l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 73 LEENTTWDLVADIEKLREK--LGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred cccCCHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 1112344555555555554 2346799999999999999999999998887776644
No 97
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.62 E-value=3e-07 Score=96.15 Aligned_cols=51 Identities=20% Similarity=0.260 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 494 DDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 494 ~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+=|..+++||.+++.+++++|+|+|.|.||-+++.++...| .+.++|+.+|
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~p 54 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISP 54 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCC
Confidence 44778899999999999999999999999999999999988 6899999987
No 98
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.62 E-value=7.7e-07 Score=97.52 Aligned_cols=105 Identities=15% Similarity=0.066 Sum_probs=69.2
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
.|.||++||+++... .+......++.+.||.|+.+|.||.|...... .......++++...+..+++. .+.
T Consensus 25 ~~~vl~~hG~~g~~~--~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~ 95 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH--EYLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREK--LGL 95 (288)
T ss_pred CCeEEEEcCCCCccH--HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHH--cCC
Confidence 477888999865442 22223345566559999999999977532100 000012344555545555543 234
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++.++|+|+||.+++.++..+|+.+.+++...+
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 129 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSM 129 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHhCccccceeeEecc
Confidence 5699999999999999999999999988887655
No 99
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.61 E-value=2.9e-06 Score=94.12 Aligned_cols=112 Identities=15% Similarity=0.150 Sum_probs=73.7
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcc
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQN 491 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 491 (1012)
+|.++.+... +..|.||++||.+.... .|... ...|.+++ .|+++|.||.|...... ...
T Consensus 15 ~g~~i~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~L~~~~-~via~D~~G~G~S~~~~--------~~~ 74 (295)
T PRK03592 15 LGSRMAYIET--------GEGDPIVFLHGNPTSSY--LWRNI-IPHLAGLG-RCLAPDLIGMGASDKPD--------IDY 74 (295)
T ss_pred CCEEEEEEEe--------CCCCEEEEECCCCCCHH--HHHHH-HHHHhhCC-EEEEEcCCCCCCCCCCC--------CCC
Confidence 6777665432 22368999999764432 34433 44566544 99999999987643210 012
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 492 VFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 492 ~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+++....+..+++. ...+++.++|+|+||.+++.++.++|+++++++...+
T Consensus 75 ~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~ 126 (295)
T PRK03592 75 TFADHARYLDAWFDA--LGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEA 126 (295)
T ss_pred CHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECC
Confidence 234444334444443 2336799999999999999999999999999888764
No 100
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.60 E-value=9e-08 Score=104.84 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=51.6
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCC-cchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 797 GYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSP-VHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 797 ~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
..||...++ ..+..+|+||.||++|++||. .|+.++.++|+++|+ +++++++|+++|+|..
T Consensus 198 ~~~~~~~~~-----~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~-------~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 198 SYDASLLVA-----DGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ-------ALTLRRQAGYDHSYYF 259 (275)
T ss_pred hcchHHHHh-----hcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC-------CeEEEEeCCCCccchh
Confidence 446665554 124578999999999999999 799999999999988 9999999999999863
No 101
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.58 E-value=2.4e-06 Score=99.42 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=76.8
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHH---hCCeEEEEEcCCCCCCCchhHHhhhhcCC
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLR---DFNGIYAIPNIRGGGEYGERWHDGGRLLN 488 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~---~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 488 (1012)
.|.++.+....|.+. ...|.||++||..+... .|.......+. .++|.|+.+|.||.|..... ..
T Consensus 184 ~~~~l~~~~~gp~~~---~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p-------~~ 251 (481)
T PLN03087 184 SNESLFVHVQQPKDN---KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP-------AD 251 (481)
T ss_pred CCeEEEEEEecCCCC---CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC-------CC
Confidence 456777766666541 23468999999764432 33322212222 35999999999998754211 00
Q ss_pred CcchHhHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 489 KQNVFDDFQCAA-EYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 489 ~~~~~~D~~a~~-~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
....+++....+ ..+++. ...+++.++|+|+||.+++.++.++|+++++++...+
T Consensus 252 ~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~ 307 (481)
T PLN03087 252 SLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAP 307 (481)
T ss_pred CcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECC
Confidence 112344444444 234443 2346899999999999999999999999999888765
No 102
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.58 E-value=1.4e-06 Score=95.36 Aligned_cols=101 Identities=15% Similarity=0.041 Sum_probs=68.5
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
.|.||++||..+... .|.. ....|+ ++|.|+.+|+||.|...... .....++++...+..+++.- ..
T Consensus 28 ~~~vv~~hG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~ 94 (278)
T TIGR03056 28 GPLLLLLHGTGASTH--SWRD-LMPPLA-RSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GL 94 (278)
T ss_pred CCeEEEEcCCCCCHH--HHHH-HHHHHh-hCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CC
Confidence 478999999754322 2332 345566 48999999999987532111 11234555555555555542 23
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+++.++|+|+||.+++.++.+.|+++++++...+
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINA 128 (278)
T ss_pred CCceEEEECccHHHHHHHHHhCCcccceEEEEcC
Confidence 5789999999999999999999998887777655
No 103
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.58 E-value=3.6e-06 Score=96.66 Aligned_cols=132 Identities=19% Similarity=0.182 Sum_probs=81.7
Q ss_pred EEEEEECC-CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCC----eEEEEEcCCCCCCCch
Q psy1288 404 KQVFYPSK-DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFN----GIYAIPNIRGGGEYGE 478 (1012)
Q Consensus 404 ~~v~~~s~-DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~RG~g~~g~ 478 (1012)
+.+.+.|. -|....+++|.|+++. .+++|+|++.||......... ...+..+.+.| .+++.+|...+.....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~--~~~ld~li~~g~i~P~ivV~id~~~~~~R~~ 257 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPV--WPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ 257 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCH--HHHHHHHHHcCCCCceEEEEECCCCcccccc
Confidence 44555553 4667788999998875 567999999999753322111 12233333346 4567777532111110
Q ss_pred hHHhhhhcCCCcchHhHHH--HHHHHHHHc--CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 479 RWHDGGRLLNKQNVFDDFQ--CAAEYLIAS--GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 479 ~~~~~~~~~~~~~~~~D~~--a~~~~l~~~--~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
. ......+.+++ ..+-++.++ -..++++.+|+|.|+||+.++.++.++|++|.++++.+|
T Consensus 258 e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 258 E-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred c-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEecc
Confidence 0 00111222222 112333333 236888999999999999999999999999999999998
No 104
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.56 E-value=3e-06 Score=91.58 Aligned_cols=102 Identities=17% Similarity=0.022 Sum_probs=67.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY 508 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~ 508 (1012)
....|.||++||..+... .|.. ....|. .+|.|+.+|.||.|...... ..++++...-+..+++.
T Consensus 13 ~~~~~~iv~lhG~~~~~~--~~~~-~~~~l~-~~~~vi~~D~~G~G~s~~~~---------~~~~~~~~~d~~~~l~~-- 77 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLD--NLGV-LARDLV-NDHDIIQVDMRNHGLSPRDP---------VMNYPAMAQDLLDTLDA-- 77 (255)
T ss_pred CCCCCCEEEECCCCCchh--HHHH-HHHHHh-hCCeEEEECCCCCCCCCCCC---------CCCHHHHHHHHHHHHHH--
Confidence 345688999999765432 3333 234455 48999999999987543210 11233332222222322
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
...+++.++|+|+||.+++.++.++|+++++++....
T Consensus 78 l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~ 114 (255)
T PRK10673 78 LQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDI 114 (255)
T ss_pred cCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEec
Confidence 2446799999999999999999999999988887643
No 105
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.55 E-value=1e-05 Score=89.19 Aligned_cols=231 Identities=13% Similarity=0.116 Sum_probs=108.5
Q ss_pred CceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeeccee-eeeeEEeeCCCeEE
Q psy1288 140 GEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLK-FVSIAWTHDHKGVF 218 (1012)
Q Consensus 140 g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~-~~~~~WSpDG~~l~ 218 (1012)
-+..+||+....+ .........|.+||++|+|..+.+|. .+||++||++++.+|+|..... ..+..+||+++.|+
T Consensus 21 ~~VtrLT~~~~~~--h~~YF~~~~ft~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~ 96 (386)
T PF14583_consen 21 HRVTRLTPPDGHS--HRLYFYQNCFTDDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALY 96 (386)
T ss_dssp -EEEE-S-TTS-E--E---TTS--B-TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEE
T ss_pred ceEEEecCCCCcc--cceeecCCCcCCCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCCccceEEecCCCeEE
Confidence 3455677754221 12345678999999999999998775 4999999999999999876432 23578999999999
Q ss_pred EEecCCCCCcc-cCCCCCceEEEEeeccccceeeeee--ecCCCEEEEEECC------------------CCCCceEEEE
Q psy1288 219 YSNQEPKSKSK-KHSKKNRSSAYHLTVNVAPITSQYI--TNEGPQFVFKTNK------------------DAPNYRLITI 277 (1012)
Q Consensus 219 y~~~~~~~~g~-~~~~~~~~l~~~~~~~~~~i~~~~~--s~dg~~l~~~tn~------------------~~~~~~L~~~ 277 (1012)
|......-... .+.. ...++|..+..-.+ +..| ..|+..++..... ..+..+|+.+
T Consensus 97 Yv~~~~~l~~vdL~T~-e~~~vy~~p~~~~g--~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~i 173 (386)
T PF14583_consen 97 YVKNGRSLRRVDLDTL-EERVVYEVPDDWKG--YGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTI 173 (386)
T ss_dssp EEETTTEEEEEETTT---EEEEEE--TTEEE--EEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEE
T ss_pred EEECCCeEEEEECCcC-cEEEEEECCccccc--ccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEE
Confidence 98643111000 1111 23345544322111 2223 3455555443321 1245789999
Q ss_pred eCCCCcccCcEEeeccCCCceeeeeE--EecCCEEEEEEEc--Cc-eEEEEEEecCCCceeeeecC--CceEEEeecccc
Q psy1288 278 DFDNFAESNWKTLIEENKDDVLDWAT--CVANDKLILSYIH--HV-KNVMHLHDLASGKHLYTFPL--DVGTIVGFSGKK 350 (1012)
Q Consensus 278 dl~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~l~~~~~~--~g-~~~l~~~dl~~G~~~~~l~~--~~~~v~~~~~sp 350 (1012)
|+.+++ .+.++.+.. .+.-+. .++...|.++-.. +. ..+||.++.+ |...+.+.. +...+..--|++
T Consensus 174 dl~tG~---~~~v~~~~~--wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~d-g~~~~~v~~~~~~e~~gHEfw~~ 247 (386)
T PF14583_consen 174 DLKTGE---RKVVFEDTD--WLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTD-GSNVKKVHRRMEGESVGHEFWVP 247 (386)
T ss_dssp ETTT-----EEEEEEESS---EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETT-S---EESS---TTEEEEEEEE-T
T ss_pred ECCCCc---eeEEEecCc--cccCcccCCCCCCEEEEeccCCcceeceEEEEEEcC-CCcceeeecCCCCcccccccccC
Confidence 999887 455555442 222222 2222344554332 12 3589999984 543333321 233344445899
Q ss_pred cCcEEEEEecCC-CCCcEEEEEeCCCCCCCCCCcceEEEEe
Q psy1288 351 KYSEIFYSFMSF-LQPTIIFHCNIPARVDPNSKLETSIFRE 390 (1012)
Q Consensus 351 dg~~l~~~~ss~-~~p~~l~~~d~~~~~~~~g~~~~~~l~~ 390 (1012)
||..|+|..... ....-|+.+|+ .++ +.+.+.+
T Consensus 248 DG~~i~y~~~~~~~~~~~i~~~d~-----~t~--~~~~~~~ 281 (386)
T PF14583_consen 248 DGSTIWYDSYTPGGQDFWIAGYDP-----DTG--ERRRLME 281 (386)
T ss_dssp TSS-EEEEEEETTT--EEEEEE-T-----TT----EEEEEE
T ss_pred CCCEEEEEeecCCCCceEEEeeCC-----CCC--CceEEEe
Confidence 999999865433 33446788888 466 4444443
No 106
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.55 E-value=1.5e-06 Score=95.52 Aligned_cols=115 Identities=17% Similarity=0.070 Sum_probs=74.2
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcc
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQN 491 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 491 (1012)
+|.++.+.... + +...+.||++||...... .|... ...|. .+|.|+++|.||.|..... ....
T Consensus 10 ~~~~~~~~~~~--~---~~~~~plvllHG~~~~~~--~w~~~-~~~L~-~~~~vi~~Dl~G~G~S~~~--------~~~~ 72 (276)
T TIGR02240 10 DGQSIRTAVRP--G---KEGLTPLLIFNGIGANLE--LVFPF-IEALD-PDLEVIAFDVPGVGGSSTP--------RHPY 72 (276)
T ss_pred CCcEEEEEEec--C---CCCCCcEEEEeCCCcchH--HHHHH-HHHhc-cCceEEEECCCCCCCCCCC--------CCcC
Confidence 67777665431 1 112356888999644332 34332 34455 4899999999998754211 0112
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 492 VFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 492 ~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++++...+..+++. .+.+++.++|+|+||.+++.++.++|++++..|...+
T Consensus 73 ~~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~ 124 (276)
T TIGR02240 73 RFPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAAT 124 (276)
T ss_pred cHHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEecc
Confidence 344444444444443 2346799999999999999999999999999888866
No 107
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.55 E-value=1.5e-06 Score=96.33 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=70.6
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
.|.||++||...... .|... ...|.. .+.|+++|.||.|.....-... ........++|+...+..+++.- ..
T Consensus 29 ~~~vlllHG~~~~~~--~w~~~-~~~L~~-~~~vi~~DlpG~G~S~~~~~~~-~~~~~~~~~~~~a~~l~~~l~~l--~~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD--HWRKN-TPVLAK-SHRVYAIDLLGYGYSDKPNPRS-APPNSFYTFETWGEQLNDFCSDV--VG 101 (294)
T ss_pred CCeEEEECCCCCChh--HHHHH-HHHHHh-CCeEEEEcCCCCCCCCCCcccc-ccccccCCHHHHHHHHHHHHHHh--cC
Confidence 378999999765443 45443 344554 5799999999988543210000 00011234556555555555432 23
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+++.++|+|+||.+++.++.++|++++++|...+
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECC
Confidence 6899999999999999999999999999998865
No 108
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.50 E-value=4.2e-07 Score=95.38 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=68.1
Q ss_pred EEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcE
Q psy1288 435 ILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRL 514 (1012)
Q Consensus 435 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i 514 (1012)
||++||..... ..|.. ....|+ +||.|+.+|.||.|...... ......+++....+..+++.- ..+++
T Consensus 1 vv~~hG~~~~~--~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~~--~~~~~ 68 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDP-LAEALA-RGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDAL--GIKKV 68 (228)
T ss_dssp EEEE-STTTTG--GGGHH-HHHHHH-TTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHHT--TTSSE
T ss_pred eEEECCCCCCH--HHHHH-HHHHHh-CCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhccccc--ccccc
Confidence 68899976544 34444 345565 69999999999977542211 011233445555554455442 22689
Q ss_pred EEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 515 AIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 515 ~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++|+|+||.+++.++.++|+.+++++...+
T Consensus 69 ~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~ 99 (228)
T PF12697_consen 69 ILVGHSMGGMIALRLAARYPDRVKGLVLLSP 99 (228)
T ss_dssp EEEEETHHHHHHHHHHHHSGGGEEEEEEESE
T ss_pred cccccccccccccccccccccccccceeecc
Confidence 9999999999999999999999999998877
No 109
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.49 E-value=3.2e-06 Score=90.11 Aligned_cols=101 Identities=16% Similarity=0.149 Sum_probs=67.6
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHH-HHHHHHcCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCA-AEYLIASGYTQS 511 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~-~~~l~~~~~~d~ 511 (1012)
|.||++||..+... .|.. ....|+ .|+.|+.+|.||.|..... .......+++.... +..+.+. .+.
T Consensus 2 ~~vv~~hG~~~~~~--~~~~-~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~ 69 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQA-LIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGI 69 (251)
T ss_pred CEEEEEcCCCCchh--hHHH-HHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCC
Confidence 67999999754333 3433 234555 6999999999997754211 11112233444433 3334333 245
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+++.++|+|+||.++..++.++|+.+.+++...+
T Consensus 70 ~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~ 103 (251)
T TIGR03695 70 EPFFLVGYSMGGRIALYYALQYPERVQGLILESG 103 (251)
T ss_pred CeEEEEEeccHHHHHHHHHHhCchheeeeEEecC
Confidence 7899999999999999999999999988888766
No 110
>KOG1838|consensus
Probab=98.48 E-value=5.5e-06 Score=91.76 Aligned_cols=137 Identities=16% Similarity=0.094 Sum_probs=89.6
Q ss_pred ceEEEEEECCCCceEEEEEEEeCCCC---CCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCch
Q psy1288 402 ETKQVFYPSKDGTKIPMFILSRKGAQ---LDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGE 478 (1012)
Q Consensus 402 ~~~~v~~~s~DG~~i~~~l~~p~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 478 (1012)
.-++..+..+||..+..-.+.+.... .++..|+||.+||-.+.+.+. |-......+.++||.+++.|.||-++.--
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~-YVr~lv~~a~~~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHES-YVRHLVHEAQRKGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhH-HHHHHHHHHHhCCcEEEEECCCCCCCCcc
Confidence 34566677788888887666544431 235679999999977666553 32223344556799999999999554311
Q ss_pred hHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC---CCceeEEEEccC
Q psy1288 479 RWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR---PDLFGAAIVQVG 545 (1012)
Q Consensus 479 ~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~~ 545 (1012)
. .....-...-+|+..+++++.++-- ..++.++|.|+||.+....+.+. ..+.+|+....|
T Consensus 171 t----Tpr~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~P 234 (409)
T KOG1838|consen 171 T----TPRLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNP 234 (409)
T ss_pred C----CCceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEecc
Confidence 0 0111112234799999999988732 23699999999999988887654 235555555555
No 111
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.47 E-value=1.9e-06 Score=91.85 Aligned_cols=94 Identities=17% Similarity=0.067 Sum_probs=63.3
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 512 (1012)
|.||++||..... ..|.. ....|. .++.|+.+|.||.|..... ....++++. +.+.+.. .+
T Consensus 5 ~~iv~~HG~~~~~--~~~~~-~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~~---~~~~~~~---~~ 65 (245)
T TIGR01738 5 VHLVLIHGWGMNA--EVFRC-LDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADAA---EAIAAQA---PD 65 (245)
T ss_pred ceEEEEcCCCCch--hhHHH-HHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHHH---HHHHHhC---CC
Confidence 6789999964332 23432 344565 4899999999998753210 112233433 3333321 26
Q ss_pred cEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 513 RLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 513 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
++.++|+|+||.+++.++.++|+++.++|...+
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~ 98 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPDRVRALVTVAS 98 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHHhhheeeEecC
Confidence 899999999999999999999998888887655
No 112
>KOG4667|consensus
Probab=98.47 E-value=4e-06 Score=83.03 Aligned_cols=231 Identities=17% Similarity=0.148 Sum_probs=131.4
Q ss_pred eEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHh
Q psy1288 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHD 482 (1012)
Q Consensus 403 ~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 482 (1012)
.+.|.++..-+.++.+.+.. .+..-++|.+||..... ...+....+..+++.|+.++.+|++|.|+....++-
T Consensus 10 ~~~ivi~n~~ne~lvg~lh~------tgs~e~vvlcHGfrS~K-n~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 10 AQKIVIPNSRNEKLVGLLHE------TGSTEIVVLCHGFRSHK-NAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY 82 (269)
T ss_pred eeEEEeccCCCchhhcceec------cCCceEEEEeecccccc-chHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc
Confidence 34555666666666553322 24556899999964322 122333455667778999999999999987666654
Q ss_pred hhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeeccc
Q psy1288 483 GGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMK 562 (1012)
Q Consensus 483 ~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~ 562 (1012)
+ ......+|+..+++++... +..--.|.|||-||..++..+...++ ..-+|...| =+| .+.
T Consensus 83 G----n~~~eadDL~sV~q~~s~~---nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsG---Ryd--------l~~ 143 (269)
T KOG4667|consen 83 G----NYNTEADDLHSVIQYFSNS---NRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSG---RYD--------LKN 143 (269)
T ss_pred C----cccchHHHHHHHHHHhccC---ceEEEEEEeecCccHHHHHHHHhhcC-chheEEccc---ccc--------hhc
Confidence 2 2233458998888887763 11223488999999999988888776 345566655 111 000
Q ss_pred ccccCccccccc-CCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCC--c-ccCCCCC
Q psy1288 563 DCKNNMFHFCDL-DTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYS--P-LHNIQGP 638 (1012)
Q Consensus 563 ~~~~~~~~~~dl-~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~s--P-~~~~~~p 638 (1012)
+ + +.+ +.. ...++....|..-..-...++.-..++....-+... + ...+
T Consensus 144 --------~--I~eRl-----------g~~---~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkI--- 196 (269)
T KOG4667|consen 144 --------G--INERL-----------GED---YLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKI--- 196 (269)
T ss_pred --------c--hhhhh-----------ccc---HHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCc---
Confidence 0 1 000 000 111111111110000001111111122111111111 0 1123
Q ss_pred CcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc
Q psy1288 639 DELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT 702 (1012)
Q Consensus 639 ~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~ 702 (1012)
.+.|| ||-+||..|..||.+.+.++.+.+... .|.+.+++.|+|....
T Consensus 197 ----d~~C~-VLTvhGs~D~IVPve~AkefAk~i~nH-----------~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 197 ----DKQCR-VLTVHGSEDEIVPVEDAKEFAKIIPNH-----------KLEIIEGADHNYTGHQ 244 (269)
T ss_pred ----CccCc-eEEEeccCCceeechhHHHHHHhccCC-----------ceEEecCCCcCccchh
Confidence 37888 999999999999999998887776543 5888899999997643
No 113
>PLN02965 Probable pheophorbidase
Probab=98.47 E-value=6.9e-06 Score=89.02 Aligned_cols=100 Identities=14% Similarity=0.088 Sum_probs=67.9
Q ss_pred EEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC-C
Q psy1288 434 CILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS-S 512 (1012)
Q Consensus 434 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~-~ 512 (1012)
+||++||..... ..|... ...|.+.||.|+.+|.||.|..... .....+++++...+..+++. ... .
T Consensus 5 ~vvllHG~~~~~--~~w~~~-~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~ 72 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKL-ATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDH 72 (255)
T ss_pred EEEEECCCCCCc--CcHHHH-HHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCC
Confidence 589999976433 245443 4556456999999999998854211 01122345555444444443 222 4
Q ss_pred cEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 513 RLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 513 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
++.++|||+||.++..++.++|++++.+|...+
T Consensus 73 ~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~ 105 (255)
T PLN02965 73 KVILVGHSIGGGSVTEALCKFTDKISMAIYVAA 105 (255)
T ss_pred CEEEEecCcchHHHHHHHHhCchheeEEEEEcc
Confidence 899999999999999999999999988887655
No 114
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.47 E-value=4.8e-06 Score=94.74 Aligned_cols=103 Identities=11% Similarity=0.114 Sum_probs=67.4
Q ss_pred CcEEEEEcCCCCCCCCCCc--ChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchH--hHHHHHHHHHHHcC
Q psy1288 432 NPCILYGYGGFAVSLQPGF--SVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVF--DDFQCAAEYLIASG 507 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~--~D~~a~~~~l~~~~ 507 (1012)
.| |+.+||-......... .......|.++||.|+++|+||.+.... ......+ +|+.++++++.+..
T Consensus 63 ~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~--------~~~~~d~~~~~~~~~v~~l~~~~ 133 (350)
T TIGR01836 63 TP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR--------YLTLDDYINGYIDKCVDYICRTS 133 (350)
T ss_pred Cc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh--------cCCHHHHHHHHHHHHHHHHHHHh
Confidence 45 7777874211111111 1234566777899999999998653111 1111111 34667788887653
Q ss_pred CCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 508 YTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 508 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+++.++|+|+||.+++.++..+|+.+++++..++
T Consensus 134 --~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~ 169 (350)
T TIGR01836 134 --KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVT 169 (350)
T ss_pred --CCCcccEEEECHHHHHHHHHHHhCchheeeEEEecc
Confidence 346899999999999999988888998888888766
No 115
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.46 E-value=4.8e-06 Score=91.90 Aligned_cols=101 Identities=20% Similarity=0.103 Sum_probs=69.5
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
.|.||++||..... ..|.. ....|. ++|.|+.+|.||.|..... ......++++.+.+..+++.- +.
T Consensus 34 ~~~iv~lHG~~~~~--~~~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~~--~~ 100 (286)
T PRK03204 34 GPPILLCHGNPTWS--FLYRD-IIVALR-DRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDHL--GL 100 (286)
T ss_pred CCEEEEECCCCccH--HHHHH-HHHHHh-CCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CC
Confidence 47899999975321 22332 234455 4899999999998754221 011123566777666666652 34
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+++.++|+|+||.++..++..+|++++++|...+
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~ 134 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNT 134 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECc
Confidence 6799999999999999999889999998887644
No 116
>PRK06489 hypothetical protein; Provisional
Probab=98.45 E-value=6.8e-06 Score=93.89 Aligned_cols=109 Identities=19% Similarity=0.131 Sum_probs=65.6
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHH-------HhCCeEEEEEcCCCCCCCchhHHhhhh-cCCCcchHhHHHHHHHH-
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFL-------RDFNGIYAIPNIRGGGEYGERWHDGGR-LLNKQNVFDDFQCAAEY- 502 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l-------~~~G~~v~~~d~RG~g~~g~~~~~~~~-~~~~~~~~~D~~a~~~~- 502 (1012)
.|.||++||..+..... +...+...+ ...+|.|+.+|.||.|..... .... .......++++...+..
T Consensus 69 gpplvllHG~~~~~~~~-~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p--~~~~~~~~~~~~~~~~a~~~~~~ 145 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSF-LSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKP--SDGLRAAFPRYDYDDMVEAQYRL 145 (360)
T ss_pred CCeEEEeCCCCCchhhh-ccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCC--CcCCCCCCCcccHHHHHHHHHHH
Confidence 47899999986543221 111222122 135899999999998753210 0000 00012345555543322
Q ss_pred HHHcCCCCCCcEE-EEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 503 LIASGYTQSSRLA-IQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 503 l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+.+. ..-+++. ++|+|+||.+++.++.++|+++.++|...+
T Consensus 146 l~~~--lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s 187 (360)
T PRK06489 146 VTEG--LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMAS 187 (360)
T ss_pred HHHh--cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeecc
Confidence 3332 2335664 899999999999999999999999887755
No 117
>KOG4627|consensus
Probab=98.45 E-value=7.8e-07 Score=87.12 Aligned_cols=182 Identities=13% Similarity=0.071 Sum_probs=113.6
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYT 509 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~ 509 (1012)
...|+++++|||++...+.........-+.++||.|+++++--...- ..-..++.++..+++|+.+...
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~----------htL~qt~~~~~~gv~filk~~~- 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQV----------HTLEQTMTQFTHGVNFILKYTE- 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCccc----------ccHHHHHHHHHHHHHHHHHhcc-
Confidence 45689999999987655444333333445568999999987543311 1112346788888998887632
Q ss_pred CCCcEEEEecChHHHHHHHHHhh-CCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCc
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQ-RPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPL 588 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~pl 588 (1012)
..+.|.+.|||+|+++++.++.+ +..++.+++..+| +++++...
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~G---vY~l~EL~-------------------------------- 178 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCG---VYDLRELS-------------------------------- 178 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhh---HhhHHHHh--------------------------------
Confidence 44568899999999998877655 3346677777777 44422111
Q ss_pred chhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHH
Q psy1288 589 TQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKF 668 (1012)
Q Consensus 589 t~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~ 668 (1012)
. .++|+-- +-.-+.....|+....- ...+.| +|++.|.+|.--.+++...|
T Consensus 179 --------------~--------te~g~dl-gLt~~~ae~~Scdl~~~-----~~v~~~-ilVv~~~~espklieQnrdf 229 (270)
T KOG4627|consen 179 --------------N--------TESGNDL-GLTERNAESVSCDLWEY-----TDVTVW-ILVVAAEHESPKLIEQNRDF 229 (270)
T ss_pred --------------C--------Ccccccc-CcccchhhhcCccHHHh-----cCceee-eeEeeecccCcHHHHhhhhH
Confidence 0 0111100 00000112223222111 256778 99999999998889999999
Q ss_pred HHHHHhhhccCCCCCCcEEEEEeCCCCCC
Q psy1288 669 AATLQEKLRDYPHQTNPLLIRIETKAGHG 697 (1012)
Q Consensus 669 ~~~L~~~~~~~~~~~~~~~l~~~p~~gHg 697 (1012)
..+++.+ .+..+++.+|-
T Consensus 230 ~~q~~~a-----------~~~~f~n~~hy 247 (270)
T KOG4627|consen 230 ADQLRKA-----------SFTLFKNYDHY 247 (270)
T ss_pred HHHhhhc-----------ceeecCCcchh
Confidence 9998776 46777877774
No 118
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.45 E-value=5e-07 Score=101.26 Aligned_cols=127 Identities=19% Similarity=0.158 Sum_probs=88.4
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCC---CCCCCCCcChhHHHHHHhCC-eEEEEEcCCCCCCCc-hhHHhhh
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGF---AVSLQPGFSVTKIVFLRDFN-GIYAIPNIRGGGEYG-ERWHDGG 484 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~---~~~~~~~~~~~~~~~l~~~G-~~v~~~d~RG~g~~g-~~~~~~~ 484 (1012)
|.|...| -++.|. ....+.|++||+|||. +....+.|+.. -|+++| ++|+.+|||-+- +| -.+....
T Consensus 76 sEDCL~L--NIwaP~--~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs---~La~~g~vVvVSvNYRLG~-lGfL~~~~~~ 147 (491)
T COG2272 76 SEDCLYL--NIWAPE--VPAEKLPVMVYIHGGGYIMGSGSEPLYDGS---ALAARGDVVVVSVNYRLGA-LGFLDLSSLD 147 (491)
T ss_pred cccceeE--EeeccC--CCCCCCcEEEEEeccccccCCCcccccChH---HHHhcCCEEEEEeCccccc-ceeeehhhcc
Confidence 5565444 455666 2356689999999983 44445556654 355567 999999999654 22 2222222
Q ss_pred --hcCCCcchHhHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHhhCCC---ceeEEEEccC
Q psy1288 485 --RLLNKQNVFDDFQCAAEYLIAS---GYTQSSRLAIQGGSNGGLLTAACINQRPD---LFGAAIVQVG 545 (1012)
Q Consensus 485 --~~~~~~~~~~D~~a~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~ 545 (1012)
........+.|++.+++|+.++ --.||+.|.|+|.|+|++.++.++.. |. +|+.+|+.+|
T Consensus 148 ~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg 215 (491)
T COG2272 148 TEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSG 215 (491)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCC
Confidence 1111124578999999999887 23799999999999999999888775 54 7888888877
No 119
>KOG3043|consensus
Probab=98.44 E-value=2e-06 Score=86.23 Aligned_cols=165 Identities=17% Similarity=0.223 Sum_probs=113.9
Q ss_pred HHHHHhCCeEEEEEcCCCCC----CC----chhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHH
Q psy1288 455 IVFLRDFNGIYAIPNIRGGG----EY----GERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLT 526 (1012)
Q Consensus 455 ~~~l~~~G~~v~~~d~RG~g----~~----g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~ 526 (1012)
...++..||.|++||+-.+- +. -..|.+ +......+.|+.+.++||..++ ++.+|+++|.++||-.+
T Consensus 60 Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~v 134 (242)
T KOG3043|consen 60 ADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVV 134 (242)
T ss_pred HHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEE
Confidence 44566679999999985541 11 122333 2223445789999999999654 57899999999999877
Q ss_pred HHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccCcccccccCCCCcccccCCCCcchhhhhhhhhhhcccccc
Q psy1288 527 AACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTI 606 (1012)
Q Consensus 527 ~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~ 606 (1012)
...+...| +|.+++...|
T Consensus 135 v~~~~~~~-~f~a~v~~hp------------------------------------------------------------- 152 (242)
T KOG3043|consen 135 VTLSAKDP-EFDAGVSFHP------------------------------------------------------------- 152 (242)
T ss_pred EEeeccch-hheeeeEecC-------------------------------------------------------------
Confidence 76666655 7888888877
Q ss_pred ccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcE
Q psy1288 607 GYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPL 686 (1012)
Q Consensus 607 g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~ 686 (1012)
++.+.++ +. +.++| +|++.|+.|..+|+.....+...|... + ....
T Consensus 153 ---------s~~d~~D------------~~------~vk~P-ilfl~ae~D~~~p~~~v~~~ee~lk~~----~--~~~~ 198 (242)
T KOG3043|consen 153 ---------SFVDSAD------------IA------NVKAP-ILFLFAELDEDVPPKDVKAWEEKLKEN----P--AVGS 198 (242)
T ss_pred ---------CcCChhH------------Hh------cCCCC-EEEEeecccccCCHHHHHHHHHHHhcC----c--ccce
Confidence 0011111 11 46788 999999999999999988888888765 1 2235
Q ss_pred EEEEeCCCCCCCCCccccc---------hhhhhHHHHHHHHhC
Q psy1288 687 LIRIETKAGHGGGKPTTKQ---------FPLTIPVIYFYLTSG 720 (1012)
Q Consensus 687 ~l~~~p~~gHg~~~~~~~~---------~~~~~~~~~fl~~~l 720 (1012)
.+.+|++-+|||...+.+. -+.+.+...|+.+++
T Consensus 199 ~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 199 QVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred eEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 7999999999997422221 234566677877664
No 120
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.44 E-value=9.9e-06 Score=93.60 Aligned_cols=106 Identities=17% Similarity=0.045 Sum_probs=65.9
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHH-HHHHHcCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAA-EYLIASGY 508 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~-~~l~~~~~ 508 (1012)
+..|.||++||..+.. ..|... ...|.+ +|.|+.+|.||.|...+.... ........+.+...+ +++...
T Consensus 103 ~~~p~vvllHG~~~~~--~~~~~~-~~~L~~-~~~vi~~D~rG~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~~~l-- 173 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ--GFFFRN-FDALAS-RFRVIAIDQLGWGGSSRPDFT---CKSTEETEAWFIDSFEEWRKAK-- 173 (402)
T ss_pred CCCCEEEEECCCCcch--hHHHHH-HHHHHh-CCEEEEECCCCCCCCCCCCcc---cccHHHHHHHHHHHHHHHHHHc--
Confidence 3568999999975422 123332 344554 799999999998764321000 000000011122222 333222
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+..++.++|||+||++++.++.++|+.++++|...+
T Consensus 174 -~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p 209 (402)
T PLN02894 174 -NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGP 209 (402)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECC
Confidence 446899999999999999999999999998887765
No 121
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.42 E-value=1.1e-05 Score=92.00 Aligned_cols=100 Identities=15% Similarity=0.074 Sum_probs=64.5
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 512 (1012)
|.||++||...... .|... ...|.+ +|.|+.+|.||.|..... . .....++++...+..+++. ...+
T Consensus 89 p~lvllHG~~~~~~--~w~~~-~~~L~~-~~~via~Dl~G~G~S~~~------~-~~~~~~~~~a~~l~~~l~~--l~~~ 155 (360)
T PLN02679 89 PPVLLVHGFGASIP--HWRRN-IGVLAK-NYTVYAIDLLGFGASDKP------P-GFSYTMETWAELILDFLEE--VVQK 155 (360)
T ss_pred CeEEEECCCCCCHH--HHHHH-HHHHhc-CCEEEEECCCCCCCCCCC------C-CccccHHHHHHHHHHHHHH--hcCC
Confidence 67899999754332 34433 345664 899999999998754211 0 0112233444333333332 2346
Q ss_pred cEEEEecChHHHHHHHHHh-hCCCceeEEEEccC
Q psy1288 513 RLAIQGGSNGGLLTAACIN-QRPDLFGAAIVQVG 545 (1012)
Q Consensus 513 ~i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~~ 545 (1012)
++.++|+|+||.+++.++. .+|++++++|...+
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~ 189 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNC 189 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECC
Confidence 8999999999999887776 46999999887765
No 122
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.41 E-value=6.1e-05 Score=82.33 Aligned_cols=234 Identities=16% Similarity=0.189 Sum_probs=141.3
Q ss_pred CCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEE
Q psy1288 107 KYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMH 186 (1012)
Q Consensus 107 ~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~ 186 (1012)
.+|.|..-|+++||..+-. +..+||..+..+...+.-|+... + -.=..+-|||+|+|... | +||
T Consensus 227 ~vS~PmIV~~RvYFlsD~e--G~GnlYSvdldGkDlrrHTnFtd-----Y---Y~R~~nsDGkrIvFq~~--G----dIy 290 (668)
T COG4946 227 NVSSPMIVGERVYFLSDHE--GVGNLYSVDLDGKDLRRHTNFTD-----Y---YPRNANSDGKRIVFQNA--G----DIY 290 (668)
T ss_pred CcCCceEEcceEEEEeccc--CccceEEeccCCchhhhcCCchh-----c---cccccCCCCcEEEEecC--C----cEE
Confidence 5788889999999999865 34689999988777676666331 1 11245789999999753 3 799
Q ss_pred EEECCCCceeceeec-----ce---eeeee-----EEe-eCCCeEEEEecCCC-----CCcc-cCCCCCceEEEEe----
Q psy1288 187 FKDVATGKEYPEVLH-----RL---KFVSI-----AWT-HDHKGVFYSNQEPK-----SKSK-KHSKKNRSSAYHL---- 242 (1012)
Q Consensus 187 v~dl~tg~~~~~t~~-----~~---~~~~~-----~WS-pDG~~l~y~~~~~~-----~~g~-~~~~~~~~l~~~~---- 242 (1012)
++|.++.....+.+. .. .+..+ .++ -+|..|++++.... ..+. ........+-|..
T Consensus 291 lydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~iqv~~~~~VrY~r~~~~ 370 (668)
T COG4946 291 LYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSIQVGKKGGVRYRRIQVD 370 (668)
T ss_pred EeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeEEcCCCCceEEEEEccC
Confidence 999888765443332 10 01110 133 26788887763211 1111 0000011111111
Q ss_pred -------------------e--------ccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCC
Q psy1288 243 -------------------T--------VNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENK 295 (1012)
Q Consensus 243 -------------------~--------~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~ 295 (1012)
. .+...++.-..+++|+.+++. | .++.|+.+|++++. .+++....
T Consensus 371 ~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vva-N---dr~el~vididngn----v~~idkS~ 442 (668)
T COG4946 371 PEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVA-N---DRFELWVIDIDNGN----VRLIDKSE 442 (668)
T ss_pred CcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEE-c---CceEEEEEEecCCC----eeEecccc
Confidence 0 001223344578888876654 3 36899999999887 45666666
Q ss_pred CceeeeeEEecCCEEEEEEEcCc--eEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEEEEecCCCCCc
Q psy1288 296 DDVLDWATCVANDKLILSYIHHV--KNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIFYSFMSFLQPT 366 (1012)
Q Consensus 296 ~~~~~~~~~~~~~~l~~~~~~~g--~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss~~~p~ 366 (1012)
...+..+.+.++...+.-.-.+| ...|.++|.++++.. .++.| .... .++++||++.|+|......+|+
T Consensus 443 ~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy-~vTT~ta~Df-sPaFD~d~ryLYfLs~RsLdPs 514 (668)
T COG4946 443 YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY-DVTTPTAYDF-SPAFDPDGRYLYFLSARSLDPS 514 (668)
T ss_pred cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE-EecCCccccc-CcccCCCCcEEEEEeccccCCC
Confidence 66676676665333332222344 357889999766653 45555 3333 6788999999999888777764
No 123
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.41 E-value=8.1e-06 Score=93.75 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=70.0
Q ss_pred CCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 431 NNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
..|.||++||..+... .|... ...|. ++|.|+.+|.||.|..... .....+.++...+..+++. .+
T Consensus 130 ~~~~vl~~HG~~~~~~--~~~~~-~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~ 195 (371)
T PRK14875 130 DGTPVVLIHGFGGDLN--NWLFN-HAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LG 195 (371)
T ss_pred CCCeEEEECCCCCccc--hHHHH-HHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cC
Confidence 3578999998654332 23322 34455 4799999999998754211 1123455666555555543 45
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+.++.++|+|+||.++..++.++|+.+.+++...+
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~ 230 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAP 230 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECc
Confidence 67899999999999999998888988888887766
No 124
>PRK07581 hypothetical protein; Validated
Probab=98.40 E-value=3.7e-06 Score=95.29 Aligned_cols=129 Identities=16% Similarity=0.106 Sum_probs=69.7
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhh---cCC
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGR---LLN 488 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~---~~~ 488 (1012)
+|.+|.+...-+.. .++.|+|++.||..+......+.......+...+|.|+++|.||.|........... ...
T Consensus 24 ~~~~l~y~~~G~~~---~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGTLN---AAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCccC---CCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 45556544432211 123467777776543332221110000134335899999999998854321100000 000
Q ss_pred CcchH-hHHHHHHHHHHHcCCCCCCcE-EEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 489 KQNVF-DDFQCAAEYLIASGYTQSSRL-AIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 489 ~~~~~-~D~~a~~~~l~~~~~~d~~~i-~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
....+ +|+.+-...+.+. ...+++ .++|+|+||.+++.++.++|++++.+|...+
T Consensus 101 ~~~~~~~~~~~~~~~l~~~--lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEK--FGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred CceeHHHHHHHHHHHHHHH--hCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 00112 3443323334442 233674 6899999999999999999999998887755
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.39 E-value=8.7e-07 Score=105.94 Aligned_cols=126 Identities=18% Similarity=0.123 Sum_probs=86.0
Q ss_pred EEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCC-eEEEEEcCC-CCCCCchhHHhhhhcCCCcchH
Q psy1288 416 IPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFN-GIYAIPNIR-GGGEYGERWHDGGRLLNKQNVF 493 (1012)
Q Consensus 416 i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G-~~v~~~d~R-G~g~~g~~~~~~~~~~~~~~~~ 493 (1012)
+...++.|.......+.|+||++|||.......... ....+....+ ++|+.+|+| |..++...... ...+...+
T Consensus 79 l~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g~ 154 (493)
T cd00312 79 LYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYGL 154 (493)
T ss_pred CeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchhH
Confidence 344566776543456789999999985443333321 1223333334 999999999 55555332111 11223347
Q ss_pred hHHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHhh--CCCceeEEEEccC
Q psy1288 494 DDFQCAAEYLIASG---YTQSSRLAIQGGSNGGLLTAACINQ--RPDLFGAAIVQVG 545 (1012)
Q Consensus 494 ~D~~a~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~~ 545 (1012)
.|+..+++|+.++- -.||++|.|+|+|+||.++..++.. .+.+|+++|+.+|
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg 211 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSG 211 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcC
Confidence 89999999998762 3799999999999999999888776 2458999998887
No 126
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.39 E-value=1.4e-05 Score=95.53 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=74.8
Q ss_pred CCeeeCCEEEEEEEc---CCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCC-------C
Q psy1288 110 SPQRQGDHYFFFHNT---GLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSS-------G 179 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~~---~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~-------G 179 (1012)
..+|+|++++|+... .++....||+.+. +++.++++. +. .+..|+|||||++|+|..+.. .
T Consensus 356 aiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~-------g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 356 ALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLE-------GH-SLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred eECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeec-------CC-CCCCceECCCCCceEEEecCcceEEEecc
Confidence 346999999999862 2234679999886 455577766 33 378899999999999886531 1
Q ss_pred CceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 180 SDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 180 ~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
....+||++++++|+..+ ... ...++++|||||++|+|+.
T Consensus 427 ~~~gql~~~~vd~ge~~~-~~~-g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 427 PATGQLARTPVDASAVAS-RVP-GPISELQLSRDGVRAAMII 466 (591)
T ss_pred CCCceEEEEeccCchhhh-ccC-CCcCeEEECCCCCEEEEEE
Confidence 123489999999988765 332 2368999999999999986
No 127
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.38 E-value=0.00011 Score=81.26 Aligned_cols=243 Identities=12% Similarity=0.096 Sum_probs=111.5
Q ss_pred CCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCC---------C
Q psy1288 109 SSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSS---------G 179 (1012)
Q Consensus 109 s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~---------G 179 (1012)
++.+.||+++.|..+.. +..+||++++.+++.+||||... ....+..+||+.+.|.|..+.. .
T Consensus 41 ~~ft~dG~kllF~s~~d--g~~nly~lDL~t~~i~QLTdg~g------~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~ 112 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFD--GNRNLYLLDLATGEITQLTDGPG------DNTFGGFLSPDDRALYYVKNGRSLRRVDLDTL 112 (386)
T ss_dssp --B-TTS-EEEEEE-TT--SS-EEEEEETTT-EEEE---SS-------B-TTT-EE-TTSSEEEEEETTTEEEEEETTT-
T ss_pred CCcCCCCCEEEEEeccC--CCcceEEEEcccCEEEECccCCC------CCccceEEecCCCeEEEEECCCeEEEEECCcC
Confidence 45678999999987754 56899999999999999999321 1112356667777766654311 0
Q ss_pred ----------------------------------------------------CceEEEEEEECCCCceeceeecceeeee
Q psy1288 180 ----------------------------------------------------SDWTSMHFKDVATGKEYPEVLHRLKFVS 207 (1012)
Q Consensus 180 ----------------------------------------------------~~~~~L~v~dl~tg~~~~~t~~~~~~~~ 207 (1012)
...+.|+.+|+.||+.........-.+-
T Consensus 113 e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH 192 (386)
T PF14583_consen 113 EERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGH 192 (386)
T ss_dssp -EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEE
T ss_pred cEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccC
Confidence 0013677777777765443222222345
Q ss_pred eEEee-CCCeEEEEecCCCCCcccCCCCCceEEEEeecc-----------ccceeeeeeecCCCEEEEEEC-CCCCCceE
Q psy1288 208 IAWTH-DHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN-----------VAPITSQYITNEGPQFVFKTN-KDAPNYRL 274 (1012)
Q Consensus 208 ~~WSp-DG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~-----------~~~i~~~~~s~dg~~l~~~tn-~~~~~~~L 274 (1012)
+.+|| |...|.|.-..+-. . -+++++.....+ ...+....|++||..|++.+- .+...+-|
T Consensus 193 ~~fsP~dp~li~fCHEGpw~-~-----Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i 266 (386)
T PF14583_consen 193 VQFSPTDPTLIMFCHEGPWD-L-----VDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWI 266 (386)
T ss_dssp EEEETTEEEEEEEEE-S-TT-T-----SS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEE
T ss_pred cccCCCCCCEEEEeccCCcc-e-----eceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEE
Confidence 55665 45556665432110 0 011222221110 022335579999999998765 45557789
Q ss_pred EEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcC--------------ceEEEEEEecCCCceeeeecCC-
Q psy1288 275 ITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHH--------------VKNVMHLHDLASGKHLYTFPLD- 339 (1012)
Q Consensus 275 ~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--------------g~~~l~~~dl~~G~~~~~l~~~- 339 (1012)
+.+++.+++. +.+.+.+. ........+ +.|++.--.+ ...-|+++++..+.... +..-
T Consensus 267 ~~~d~~t~~~----~~~~~~p~-~~H~~ss~D-g~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~-l~~h~ 339 (386)
T PF14583_consen 267 AGYDPDTGER----RRLMEMPW-CSHFMSSPD-GKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRK-LARHD 339 (386)
T ss_dssp EEE-TTT--E----EEEEEE-S-EEEEEE-TT-SSEEEEEE-------------------EEEEEETTTTEEEE-EEE--
T ss_pred EeeCCCCCCc----eEEEeCCc-eeeeEEcCC-CCEEEecCCCCCccccccccceecCCcEEEEeccccCceee-eeecc
Confidence 9999988762 22222222 111111222 3333322111 12467778886554321 1100
Q ss_pred ----------ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 340 ----------VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 340 ----------~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.-.--.++||||++.|+|.++- .-++.||.+++
T Consensus 340 ~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~-~G~~~vY~v~i 382 (386)
T PF14583_consen 340 TSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDM-EGPPAVYLVEI 382 (386)
T ss_dssp -----BTTBSSTT----EE-TTSSEEEEEE-T-TSS-EEEEEE-
T ss_pred CcceeecCCCccCCCCCccCCCCCEEEEECCC-CCCccEEEEeC
Confidence 0001246789999999998765 45678999987
No 128
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.33 E-value=1.2e-05 Score=92.33 Aligned_cols=111 Identities=18% Similarity=0.104 Sum_probs=68.7
Q ss_pred CcEEEEEcCCCCCCCCC-----------CcChhH---HHHHHhCCeEEEEEcCCCCC--CCchhHHhh--hhc---CCCc
Q psy1288 432 NPCILYGYGGFAVSLQP-----------GFSVTK---IVFLRDFNGIYAIPNIRGGG--EYGERWHDG--GRL---LNKQ 490 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~-----------~~~~~~---~~~l~~~G~~v~~~d~RG~g--~~g~~~~~~--~~~---~~~~ 490 (1012)
.|.||++||..+..... .|...+ ..++. .+|.|+++|.+|+. ..+...... +.. ....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~-~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT-DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc-cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 58899999976544311 122211 12224 58999999999842 212111000 000 0113
Q ss_pred chHhHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 491 NVFDDFQCAAEYLIASGYTQSSR-LAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 491 ~~~~D~~a~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+++|+...+..+++.- ..++ ..++|+|+||.+++.++.++|++++.+|...+
T Consensus 127 ~~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 180 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIAS 180 (379)
T ss_pred CCHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECC
Confidence 45677776666666542 3356 47999999999999999999999998888765
No 129
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.30 E-value=3.8e-06 Score=103.73 Aligned_cols=62 Identities=18% Similarity=0.166 Sum_probs=54.0
Q ss_pred HhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 794 YLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 794 ~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
+|.+.+++.+++ +|+.|+|++||.+|.+|++.|+.++|.+|+++|+ |..+++.++ +|+....
T Consensus 441 fW~~rn~~~~~~-------kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~-------pkkL~l~~g-~H~~~~~ 502 (767)
T PRK05371 441 FWDDRNYLKDAD-------KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGV-------PKKLFLHQG-GHVYPNN 502 (767)
T ss_pred HHHhCCHhhHhh-------CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCC-------CeEEEEeCC-CccCCCc
Confidence 456778999999 9999999999999999999999999999999988 888887754 7976543
No 130
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.30 E-value=1.7e-05 Score=90.29 Aligned_cols=129 Identities=16% Similarity=0.075 Sum_probs=77.5
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCC---------CcChhH--HHHHHhCCeEEEEEcCCC--CCCCch
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQP---------GFSVTK--IVFLRDFNGIYAIPNIRG--GGEYGE 478 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~---------~~~~~~--~~~l~~~G~~v~~~d~RG--~g~~g~ 478 (1012)
+|.+|.+..+-+.+ ....|.||++||-.+..... .|.... ...+...+|.|+++|.|| +|..+.
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 56677766654322 12346899999965432111 122211 012323689999999999 333222
Q ss_pred -hHHhhhhc---CCCcchHhHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 479 -RWHDGGRL---LNKQNVFDDFQCAAEYLIASGYTQSSR-LAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 479 -~~~~~~~~---~~~~~~~~D~~a~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+...+.. .....+++|+...+..+++.- ..++ +.++|+|+||.+++.++.++|++++.+|...+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~ 160 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLAT 160 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEcc
Confidence 11111110 011234667766665555542 3456 88999999999999999999999998888766
No 131
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.29 E-value=1.1e-05 Score=88.41 Aligned_cols=66 Identities=15% Similarity=0.131 Sum_probs=55.8
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCC-CcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQT-NPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~-~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
.+.| |++.||..|..||+....++++++.++ | ..+.+..++.++|.... .....+.++|+...+..
T Consensus 218 P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~~-------G~a~V~~~~~~~~~H~~~~-----~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 218 PTVP-VLIYQGTADEVVPPADTDALVAKWCAA-------GGADVEYVRYPGGGHLGAA-----FASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCC-EEEEecCCCCCCChHHHHHHHHHHHHc-------CCCCEEEEecCCCChhhhh-----hcCcHHHHHHHHHHHCC
Confidence 3567 999999999999999999999999998 8 69999999999997532 34456778999988765
No 132
>PLN02578 hydrolase
Probab=98.28 E-value=2.5e-05 Score=89.06 Aligned_cols=98 Identities=14% Similarity=-0.005 Sum_probs=62.8
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcc-hHhHHHHHHHHHHHcCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQN-VFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~-~~~D~~a~~~~l~~~~~~d~ 511 (1012)
|.||++||..... ..|... ...|+ .+|.|+.+|++|.|....... ..... ..+|+.+.++.+. .
T Consensus 87 ~~vvliHG~~~~~--~~w~~~-~~~l~-~~~~v~~~D~~G~G~S~~~~~-----~~~~~~~a~~l~~~i~~~~------~ 151 (354)
T PLN02578 87 LPIVLIHGFGASA--FHWRYN-IPELA-KKYKVYALDLLGFGWSDKALI-----EYDAMVWRDQVADFVKEVV------K 151 (354)
T ss_pred CeEEEECCCCCCH--HHHHHH-HHHHh-cCCEEEEECCCCCCCCCCccc-----ccCHHHHHHHHHHHHHHhc------c
Confidence 5678999965432 233332 34455 489999999999876433210 01000 0123333333221 3
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+++.++|+|+||+++..++.++|+++++++...+
T Consensus 152 ~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 152 EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 6789999999999999999999999998887654
No 133
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.27 E-value=0.00053 Score=75.57 Aligned_cols=235 Identities=12% Similarity=0.069 Sum_probs=122.3
Q ss_pred CeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 111 PQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 111 p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
.+|+|+.+|..-... ..|++.+..+++....+.. + .....+.|+|||+.++.+...++ .|+++|+
T Consensus 38 ~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~------~-~~~~~~~~~~~g~~l~~~~~~~~----~l~~~d~ 102 (300)
T TIGR03866 38 LSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPS------G-PDPELFALHPNGKILYIANEDDN----LVTVIDI 102 (300)
T ss_pred ECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccC------C-CCccEEEECCCCCEEEEEcCCCC----eEEEEEC
Confidence 457888766553221 3455556555543332221 1 12345789999998865543322 7999999
Q ss_pred CCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCC
Q psy1288 191 ATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAP 270 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~ 270 (1012)
.+++.............++|+|||+.+++........-..+... ..+....... .......|+++|+.|++.+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--- 177 (300)
T TIGR03866 103 ETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKT-YEIVDNVLVD-QRPRFAEFTADGKELWVSSEI--- 177 (300)
T ss_pred CCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCC-CeEEEEEEcC-CCccEEEECCCCCEEEEEcCC---
Confidence 88765432111222356899999998887654311000000000 0111000000 112234589999988876543
Q ss_pred CceEEEEeCCCCcccCcEEeeccCC----C--ceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEE
Q psy1288 271 NYRLITIDFDNFAESNWKTLIEENK----D--DVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIV 344 (1012)
Q Consensus 271 ~~~L~~~dl~~~~~~~~~~l~~~~~----~--~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~ 344 (1012)
...+..+|+.+++. ...+..... . .........+++.+++....+ .++.+|++.+++....+... ..+.
T Consensus 178 ~~~v~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~~-~~~~ 252 (300)
T TIGR03866 178 GGTVSVIDVATRKV--IKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA--NRVAVVDAKTYEVLDYLLVG-QRVW 252 (300)
T ss_pred CCEEEEEEcCccee--eeeeeecccccccccCCccceEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEeC-CCcc
Confidence 24577788876541 112211110 0 011111223445555544332 46889999777654433222 2344
Q ss_pred eecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 345 GFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 345 ~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.++|+|+++.|+.... .-..|.++|+
T Consensus 253 ~~~~~~~g~~l~~~~~---~~~~i~v~d~ 278 (300)
T TIGR03866 253 QLAFTPDEKYLLTTNG---VSNDVSVIDV 278 (300)
T ss_pred eEEECCCCCEEEEEcC---CCCeEEEEEC
Confidence 6788999998765432 1236889998
No 134
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.26 E-value=2.9e-05 Score=81.74 Aligned_cols=112 Identities=19% Similarity=0.237 Sum_probs=79.2
Q ss_pred EEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHH
Q psy1288 417 PMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDF 496 (1012)
Q Consensus 417 ~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~ 496 (1012)
+..++.|.. .+.+|++++.||-. ....+-...++-+++.||+|+.++...-... ......+++
T Consensus 5 ~l~v~~P~~---~g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-----------~~~~~~~~~ 67 (259)
T PF12740_consen 5 PLLVYYPSS---AGTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-----------DDTDEVASA 67 (259)
T ss_pred CeEEEecCC---CCCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEecccccCCC-----------CcchhHHHH
Confidence 456777876 57899999999964 2223323346677889999999995442211 112234566
Q ss_pred HHHHHHHHHc---C-----CCCCCcEEEEecChHHHHHHHHHhhC-----CCceeEEEEccC
Q psy1288 497 QCAAEYLIAS---G-----YTQSSRLAIQGGSNGGLLTAACINQR-----PDLFGAAIVQVG 545 (1012)
Q Consensus 497 ~a~~~~l~~~---~-----~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~f~a~v~~~~ 545 (1012)
...++|+.+. . ..|-++|+++|||.||-++..++... +..|++++...|
T Consensus 68 ~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 68 AEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred HHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecc
Confidence 7777887663 1 24778999999999999998887775 457999999888
No 135
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.24 E-value=1.5e-05 Score=86.42 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=64.4
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 512 (1012)
|.||++||..... ..|.. ....|.+ .|.|+++|.||.|.... + ....++++. +.+.+. ..+
T Consensus 14 ~~ivllHG~~~~~--~~w~~-~~~~L~~-~~~vi~~Dl~G~G~S~~-~--------~~~~~~~~~---~~l~~~---~~~ 74 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRC-IDEELSS-HFTLHLVDLPGFGRSRG-F--------GALSLADMA---EAVLQQ---APD 74 (256)
T ss_pred CeEEEECCCCCCh--hHHHH-HHHHHhc-CCEEEEecCCCCCCCCC-C--------CCCCHHHHH---HHHHhc---CCC
Confidence 5689999964333 24544 3455664 79999999999875321 0 112233333 334433 347
Q ss_pred cEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 513 RLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 513 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
++.++|+|+||.++..++.++|++++.+|...+
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~ 107 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALTHPERVQALVTVAS 107 (256)
T ss_pred CeEEEEECHHHHHHHHHHHhChHhhheEEEecC
Confidence 889999999999999999999999998887655
No 136
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.22 E-value=0.0012 Score=72.63 Aligned_cols=217 Identities=15% Similarity=0.149 Sum_probs=110.3
Q ss_pred EEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEE
Q psy1288 131 VMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAW 210 (1012)
Q Consensus 131 ~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~W 210 (1012)
.|++.+..+++....+. +........|||||+.++.+.... ..|+++|+++++.............+.|
T Consensus 12 ~v~~~d~~t~~~~~~~~-------~~~~~~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 80 (300)
T TIGR03866 12 TISVIDTATLEVTRTFP-------VGQRPRGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFAL 80 (300)
T ss_pred EEEEEECCCCceEEEEE-------CCCCCCceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEE
Confidence 45555655554433333 112245689999999876554332 2799999999886542222222356899
Q ss_pred eeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEe
Q psy1288 211 THDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTL 290 (1012)
Q Consensus 211 SpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l 290 (1012)
+|||+.++.+..........+... .+.+...... .......++|+|+.+++..... ..+..++..+... ...+
T Consensus 81 ~~~g~~l~~~~~~~~~l~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~---~~~~~~d~~~~~~--~~~~ 153 (300)
T TIGR03866 81 HPNGKILYIANEDDNLVTVIDIET-RKVLAEIPVG-VEPEGMAVSPDGKIVVNTSETT---NMAHFIDTKTYEI--VDNV 153 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCC-CeEEeEeeCC-CCcceEEECCCCCEEEEEecCC---CeEEEEeCCCCeE--EEEE
Confidence 999997766543211000000000 0111110000 1112335889998887765431 2344456654331 1111
Q ss_pred eccCCCceeeeeE-EecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCc-----e--EEEeecccccCcEEEEEecCC
Q psy1288 291 IEENKDDVLDWAT-CVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDV-----G--TIVGFSGKKKYSEIFYSFMSF 362 (1012)
Q Consensus 291 ~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~-----~--~v~~~~~spdg~~l~~~~ss~ 362 (1012)
.... .. .... ..+++.+++....+ ..+.+|++.+++....++... . ....+.++|+++.+++...+.
T Consensus 154 ~~~~--~~-~~~~~s~dg~~l~~~~~~~--~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~ 228 (300)
T TIGR03866 154 LVDQ--RP-RFAEFTADGKELWVSSEIG--GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA 228 (300)
T ss_pred EcCC--Cc-cEEEECCCCCEEEEEcCCC--CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCC
Confidence 1111 11 1122 23445565543323 468889997776544443211 1 112456789998877655332
Q ss_pred CCCcEEEEEeC
Q psy1288 363 LQPTIIFHCNI 373 (1012)
Q Consensus 363 ~~p~~l~~~d~ 373 (1012)
..+.++|+
T Consensus 229 ---~~i~v~d~ 236 (300)
T TIGR03866 229 ---NRVAVVDA 236 (300)
T ss_pred ---CeEEEEEC
Confidence 36888898
No 137
>KOG4178|consensus
Probab=98.22 E-value=0.00012 Score=78.61 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=69.8
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYT 509 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~ 509 (1012)
+..|+|+.+||-+....++.+. ...|+++||.|+++|.||.|... ........++.-+...+..+++. .
T Consensus 42 ~~gP~illlHGfPe~wyswr~q---~~~la~~~~rviA~DlrGyG~Sd------~P~~~~~Yt~~~l~~di~~lld~--L 110 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQ---IPGLASRGYRVIAPDLRGYGFSD------APPHISEYTIDELVGDIVALLDH--L 110 (322)
T ss_pred CCCCEEEEEccCCccchhhhhh---hhhhhhcceEEEecCCCCCCCCC------CCCCcceeeHHHHHHHHHHHHHH--h
Confidence 4579999999987655443332 23466689999999999976421 11111112222222223333332 1
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.-+++.+.||++|+.++..++..+|++..+.+....
T Consensus 111 g~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 111 GLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred ccceeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 147899999999999999999999999999887754
No 138
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.20 E-value=3.6e-05 Score=84.25 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=70.9
Q ss_pred CCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY 508 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~ 508 (1012)
.+..|.||++||..... ..|... ...|.++||.|+.+|.+|.|.... .......+++....+..+++.-.
T Consensus 15 ~~~~p~vvliHG~~~~~--~~w~~~-~~~L~~~g~~vi~~dl~g~G~s~~-------~~~~~~~~~~~~~~l~~~i~~l~ 84 (273)
T PLN02211 15 NRQPPHFVLIHGISGGS--WCWYKI-RCLMENSGYKVTCIDLKSAGIDQS-------DADSVTTFDEYNKPLIDFLSSLP 84 (273)
T ss_pred cCCCCeEEEECCCCCCc--CcHHHH-HHHHHhCCCEEEEecccCCCCCCC-------CcccCCCHHHHHHHHHHHHHhcC
Confidence 35568999999975433 244433 455665799999999999774210 00112345555544444444321
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+++.++|||+||.++..++.++|++++.+|...+
T Consensus 85 -~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~ 120 (273)
T PLN02211 85 -ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAA 120 (273)
T ss_pred -CCCCEEEEEECchHHHHHHHHHhChhheeEEEEecc
Confidence 236899999999999999998888999988887755
No 139
>PRK13604 luxD acyl transferase; Provisional
Probab=98.15 E-value=4.6e-06 Score=90.39 Aligned_cols=57 Identities=12% Similarity=0.161 Sum_probs=51.4
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 798 YSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 798 ~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
.||+..++ +++.|+|+|||.+|.-||+.+++++|.+++.. +..++++|+.+|.+.+.
T Consensus 192 ~s~i~~~~-------~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~---------~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 192 DSTINKMK-------GLDIPFIAFTANNDSWVKQSEVIDLLDSIRSE---------QCKLYSLIGSSHDLGEN 248 (307)
T ss_pred ccHHHHHh-------hcCCCEEEEEcCCCCccCHHHHHHHHHHhccC---------CcEEEEeCCCccccCcc
Confidence 57778888 88899999999999999999999999997764 77999999999999875
No 140
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.14 E-value=3.6e-06 Score=101.89 Aligned_cols=129 Identities=17% Similarity=0.126 Sum_probs=81.1
Q ss_pred EEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc-ChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHh
Q psy1288 416 IPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF-SVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFD 494 (1012)
Q Consensus 416 i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~-~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 494 (1012)
|..-++.|.......+.|++|++|||.-....... ......++..++++||.+|||-+. +|--.........+...+.
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~Gfl~~~~~~~~~gN~Gl~ 187 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FGFLSLGDLDAPSGNYGLL 187 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HHH-BSSSTTSHBSTHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cccccccccccCchhhhhh
Confidence 44567788876555579999999998533332211 111234555679999999999532 1111111000002445678
Q ss_pred HHHHHHHHHHHcC---CCCCCcEEEEecChHHHHHHHHHhhC--CCceeEEEEccC
Q psy1288 495 DFQCAAEYLIASG---YTQSSRLAIQGGSNGGLLTAACINQR--PDLFGAAIVQVG 545 (1012)
Q Consensus 495 D~~a~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~~ 545 (1012)
|.+.+++|+.++- -.||++|.|+|+|+||..+...+... ..+|+.+|+.+|
T Consensus 188 Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 188 DQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 9999999999873 27999999999999999998877652 358999999988
No 141
>KOG2984|consensus
Probab=98.11 E-value=5.5e-06 Score=81.02 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=68.5
Q ss_pred EEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCc
Q psy1288 434 CILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSR 513 (1012)
Q Consensus 434 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~ 513 (1012)
.|+.+-|.-+ +...+|.+...++..-.-+.++..|.+|-|..-.- .+...-+.-..|...+++-+... +..+
T Consensus 44 ~iLlipGalG-s~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP----~Rkf~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALG-SYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPP----ERKFEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEecccccc-cccccCCHHHHhcCCCCceEEEEECCCCCCCCCCC----cccchHHHHHHhHHHHHHHHHHh---CCCC
Confidence 4555566543 33456777766655443489999999986632110 00001111235666777655553 5678
Q ss_pred EEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccc
Q psy1288 514 LAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEIS 550 (1012)
Q Consensus 514 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~ 550 (1012)
+.++|+|-||..++.++.+.++.+...+.+.++..++
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn 152 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN 152 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceec
Confidence 9999999999999999999888776666665533343
No 142
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.11 E-value=4.2e-05 Score=81.93 Aligned_cols=97 Identities=16% Similarity=0.091 Sum_probs=65.1
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 512 (1012)
|.||++||..+... .|.... ..+ + +|.|+.+|.||.|..... ....+++....+..+++.- ..+
T Consensus 3 p~vvllHG~~~~~~--~w~~~~-~~l-~-~~~vi~~D~~G~G~S~~~---------~~~~~~~~~~~l~~~l~~~--~~~ 66 (242)
T PRK11126 3 PWLVFLHGLLGSGQ--DWQPVG-EAL-P-DYPRLYIDLPGHGGSAAI---------SVDGFADVSRLLSQTLQSY--NIL 66 (242)
T ss_pred CEEEEECCCCCChH--HHHHHH-HHc-C-CCCEEEecCCCCCCCCCc---------cccCHHHHHHHHHHHHHHc--CCC
Confidence 67999999765442 454433 344 3 799999999998754221 0113444444444444432 346
Q ss_pred cEEEEecChHHHHHHHHHhhCCC-ceeEEEEccC
Q psy1288 513 RLAIQGGSNGGLLTAACINQRPD-LFGAAIVQVG 545 (1012)
Q Consensus 513 ~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~~ 545 (1012)
++.++|+|+||.+++.++.++|+ ++++++...+
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~ 100 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGG 100 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCC
Confidence 89999999999999999988865 4888777655
No 143
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.08 E-value=9.3e-05 Score=83.99 Aligned_cols=73 Identities=18% Similarity=0.096 Sum_probs=50.5
Q ss_pred CCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCc-EEEEecChHHHHHHHHHhhCCCceeE
Q psy1288 461 FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSR-LAIQGGSNGGLLTAACINQRPDLFGA 539 (1012)
Q Consensus 461 ~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a 539 (1012)
.+|.|+.+|.||.|+... . .....|....+..+++. ...++ +.++|+|+||.+++.++.++|+++..
T Consensus 98 ~~~~Vi~~Dl~G~g~s~~-------~---~~~~~~~a~dl~~ll~~--l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~ 165 (343)
T PRK08775 98 ARFRLLAFDFIGADGSLD-------V---PIDTADQADAIALLLDA--LGIARLHAFVGYSYGALVGLQFASRHPARVRT 165 (343)
T ss_pred cccEEEEEeCCCCCCCCC-------C---CCCHHHHHHHHHHHHHH--cCCCcceEEEEECHHHHHHHHHHHHChHhhhe
Confidence 489999999998754210 0 11233444444444443 22334 46999999999999999999999999
Q ss_pred EEEccC
Q psy1288 540 AIVQVG 545 (1012)
Q Consensus 540 ~v~~~~ 545 (1012)
.|...+
T Consensus 166 LvLi~s 171 (343)
T PRK08775 166 LVVVSG 171 (343)
T ss_pred EEEECc
Confidence 888766
No 144
>PRK10162 acetyl esterase; Provisional
Probab=98.08 E-value=1.4e-05 Score=89.41 Aligned_cols=47 Identities=17% Similarity=0.147 Sum_probs=43.0
Q ss_pred CCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 814 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
.-+|++|++|++|+.+ .|++.|.++|++.|+ ++++.++++..|||..
T Consensus 247 ~lPp~~i~~g~~D~L~--de~~~~~~~L~~aGv-------~v~~~~~~g~~H~f~~ 293 (318)
T PRK10162 247 DVPPCFIAGAEFDPLL--DDSRLLYQTLAAHQQ-------PCEFKLYPGTLHAFLH 293 (318)
T ss_pred CCCCeEEEecCCCcCc--ChHHHHHHHHHHcCC-------CEEEEEECCCceehhh
Confidence 4589999999999986 499999999999999 9999999999999863
No 145
>PRK11460 putative hydrolase; Provisional
Probab=97.98 E-value=1.4e-05 Score=85.04 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=45.4
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
.+|+|++||++|+.||+.++.+++++|++.|+ ++++.+||+.||++..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~-------~~~~~~~~~~gH~i~~ 195 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGG-------DVTLDIVEDLGHAIDP 195 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCC-------CeEEEEECCCCCCCCH
Confidence 39999999999999999999999999999987 9999999999999964
No 146
>KOG3101|consensus
Probab=97.97 E-value=2.7e-05 Score=76.86 Aligned_cols=131 Identities=14% Similarity=0.103 Sum_probs=80.6
Q ss_pred CceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcC--hhHHHHHHhCCeEEEEEcC--CCCCCCch--hH------
Q psy1288 413 GTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS--VTKIVFLRDFNGIYAIPNI--RGGGEYGE--RW------ 480 (1012)
Q Consensus 413 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~d~--RG~g~~g~--~~------ 480 (1012)
+..+..-++.|+.....++.|+++++.|-.. ....|. ..+.+.....|.+|+.+|- ||-.--|. .|
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTC--T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTC--THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcc--cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 3445667788888777777999999988532 222332 2244555567999999985 55321111 11
Q ss_pred --Hhh-hhcCCCc--chHhHHHHHHHHHHH--cCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 481 --HDG-GRLLNKQ--NVFDDFQCAAEYLIA--SGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 481 --~~~-~~~~~~~--~~~~D~~a~~~~l~~--~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+-. ....|.. ++++=+..-+-.++. .-.+|+.+++|.||||||+-++....+.|.+|+.+-+.+|
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAP 174 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAP 174 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecccc
Confidence 111 1111211 122222222222222 2347999999999999999988888888999999999988
No 147
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.94 E-value=1.4e-05 Score=86.34 Aligned_cols=131 Identities=19% Similarity=0.170 Sum_probs=80.8
Q ss_pred CceEEEEEEEeCCCCCCCCCcEEEEEcCC-CCCCCCCCcChhHHHHHHhCC----eEEEEEcCCCCCCCchhHHhh----
Q psy1288 413 GTKIPMFILSRKGAQLDGNNPCILYGYGG-FAVSLQPGFSVTKIVFLRDFN----GIYAIPNIRGGGEYGERWHDG---- 483 (1012)
Q Consensus 413 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg-~~~~~~~~~~~~~~~~l~~~G----~~v~~~d~RG~g~~g~~~~~~---- 483 (1012)
|..+.++++.|+++...++.|+|++.||. ..... .........+.. .| .++++++..+.......|...
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~-~~~~~~~~~~~~-~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRN-GNAQEALDRLIA-EGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHH-HHHHHHHHHHHH-HHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCcccccc-chHHHHHHHHHH-hCCCCceEEEEEecccccccccccccccccc
Confidence 66788999999998788999999999995 10000 000111112233 23 455555554443222333311
Q ss_pred --hhcCCCcchHhHHH--HHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 484 --GRLLNKQNVFDDFQ--CAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 484 --~~~~~~~~~~~D~~--a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.....+...+.+++ ..+.++.++-.+.+++.+|+|.|+||+.++.++.++|++|.++++.+|
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSG 148 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESE
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCc
Confidence 11112222334443 234555555555666699999999999999999999999999999998
No 148
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.91 E-value=6e-05 Score=84.34 Aligned_cols=190 Identities=17% Similarity=0.155 Sum_probs=110.8
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEE-eCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRI-ETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~-~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
.+.|.+|++||+.=..............+... .+.+++.+ |+-+.+. .+...+++..+.+.|+.++...
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~-------~g~~vv~vdYrlaPe~---~~p~~~~d~~~a~~~l~~~~~~ 146 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAA-------AGAVVVSVDYRLAPEH---PFPAALEDAYAAYRWLRANAAE 146 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHH-------cCCEEEecCCCCCCCC---CCCchHHHHHHHHHHHHhhhHh
Confidence 46889999999954444444443555666555 44444444 4434333 3345578888889999988654
Q ss_pred CCCCCCCCCCccCCccccccCccceeeecccccccc-----chhhhcccccCCCCCCCCCC----------------Ccc
Q psy1288 723 LQRYPETPNKADGSENVRNQDQKLYYHYLGTDQKDD-----ILIAEVLDMLKFNKFTIGYF----------------WES 781 (1012)
Q Consensus 723 ~~~~~d~~~~~GgS~g~~~~~~~~~~~~~~~t~~~~-----~~~~~~~~~~~~~~~~~~~~----------------~~~ 781 (1012)
....++...+.|.|-| +..++++++.-+.. ..+..++-|+.... ..... |+.
T Consensus 147 ~g~dp~~i~v~GdSAG------G~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (312)
T COG0657 147 LGIDPSRIAVAGDSAG------GHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGEADLLDAAAILAWFA 219 (312)
T ss_pred hCCCccceEEEecCcc------cHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCCccccCHHHHHHHHH
Confidence 3333333334488877 23444444443322 11112222222211 00000 110
Q ss_pred --cCCCCCChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEE
Q psy1288 782 --DYGSPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRI 859 (1012)
Q Consensus 782 --~~g~~~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 859 (1012)
..+...+... -..||+.... +. . -+|+||++|+.|+-.+ |++.+.++|+..|+ ++++.+
T Consensus 220 ~~~~~~~~~~~~----p~~spl~~~~----~~-~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv-------~~~~~~ 280 (312)
T COG0657 220 DLYLGAAPDRED----PEASPLASDD----LS-G-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGV-------PVELRV 280 (312)
T ss_pred HHhCcCccccCC----CccCcccccc----cc-C-CCCEEEEecCCCcchh--HHHHHHHHHHHcCC-------eEEEEE
Confidence 0111111000 1356665552 11 3 6999999999999999 99999999999999 999999
Q ss_pred eCCCCCCCCC
Q psy1288 860 ETKAGHGGGK 869 (1012)
Q Consensus 860 ~~~~gH~~~~ 869 (1012)
+++..|+|..
T Consensus 281 ~~g~~H~f~~ 290 (312)
T COG0657 281 YPGMIHGFDL 290 (312)
T ss_pred eCCcceeccc
Confidence 9999999953
No 149
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.90 E-value=9.8e-05 Score=84.25 Aligned_cols=120 Identities=17% Similarity=0.057 Sum_probs=76.9
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCC
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNK 489 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 489 (1012)
+.+|.++.+.. .+ .+..|.||++||...... .|... ...|. .+|.|+++|.+|.|....... ....
T Consensus 111 ~~~~~~~~y~~---~G---~~~~~~ivllHG~~~~~~--~w~~~-~~~L~-~~~~Via~DlpG~G~S~~p~~----~~~~ 176 (383)
T PLN03084 111 SSDLFRWFCVE---SG---SNNNPPVLLIHGFPSQAY--SYRKV-LPVLS-KNYHAIAFDWLGFGFSDKPQP----GYGF 176 (383)
T ss_pred cCCceEEEEEe---cC---CCCCCeEEEECCCCCCHH--HHHHH-HHHHh-cCCEEEEECCCCCCCCCCCcc----cccc
Confidence 35676665432 22 123478999999754332 34433 45566 489999999999875322100 0011
Q ss_pred cchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 490 QNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 490 ~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
...++++...+..+++.- ..+++.++|+|+||.+++.++.++|++++.+|...+
T Consensus 177 ~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~ 230 (383)
T PLN03084 177 NYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNP 230 (383)
T ss_pred cCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECC
Confidence 224455555555555442 235788999999999999999999999999998865
No 150
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=97.90 E-value=0.00024 Score=81.30 Aligned_cols=85 Identities=18% Similarity=0.075 Sum_probs=59.0
Q ss_pred HhCCeEEEEEcCCCCCC--------CchhHHhhhhc-----CCCcchHhHHHHHHHHHHHcCCCCCCcEE-EEecChHHH
Q psy1288 459 RDFNGIYAIPNIRGGGE--------YGERWHDGGRL-----LNKQNVFDDFQCAAEYLIASGYTQSSRLA-IQGGSNGGL 524 (1012)
Q Consensus 459 ~~~G~~v~~~d~RG~g~--------~g~~~~~~~~~-----~~~~~~~~D~~a~~~~l~~~~~~d~~~i~-i~G~S~GG~ 524 (1012)
+-.-|-|+++|.-|++. .|..-...+.+ .....++.|+...+..+++.- .-+++. ++|+|+||.
T Consensus 96 Dt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l--gi~~~~~vvG~SmGG~ 173 (389)
T PRK06765 96 DTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL--GIARLHAVMGPSMGGM 173 (389)
T ss_pred CCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHH
Confidence 33469999999998752 12111111111 223356788888877777642 345675 899999999
Q ss_pred HHHHHHhhCCCceeEEEEccC
Q psy1288 525 LTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 525 l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++..+.++|+++..+|..++
T Consensus 174 ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 174 QAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred HHHHHHHHChHhhheEEEEec
Confidence 999999999999998888766
No 151
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.90 E-value=0.00026 Score=84.91 Aligned_cols=164 Identities=12% Similarity=0.105 Sum_probs=95.4
Q ss_pred EeeeEEECCCCcEEEEEEeCC---CCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSS---GSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~---G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
.++++++||||+++||+.... ++...+||+.+. +|+.++.+.... .+.++|||||+.|+|+.+.
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~-~t~PsWspDG~~lw~v~dg----------- 417 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHS-LTRPSWSLDADAVWVVVDG----------- 417 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCC-CCCceECCCCCceEEEecC-----------
Confidence 578999999999999998532 234579999997 455566554443 6889999999999998642
Q ss_pred CceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEE
Q psy1288 235 NRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSY 314 (1012)
Q Consensus 235 ~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 314 (1012)
+.+.++.+.+ ...+++.++++.++.. . ..+..+.......||.++++..
T Consensus 418 ------------------------~~~~~v~~~~-~~gql~~~~vd~ge~~---~---~~~g~Issl~wSpDG~RiA~i~ 466 (591)
T PRK13616 418 ------------------------NTVVRVIRDP-ATGQLARTPVDASAVA---S---RVPGPISELQLSRDGVRAAMII 466 (591)
T ss_pred ------------------------cceEEEeccC-CCceEEEEeccCchhh---h---ccCCCcCeEEECCCCCEEEEEE
Confidence 1122333222 2356777777655421 1 1112222222334666776655
Q ss_pred EcCceEEEEE---EecCCCceeee-----ecCCce-EEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 315 IHHVKNVMHL---HDLASGKHLYT-----FPLDVG-TIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 315 ~~~g~~~l~~---~dl~~G~~~~~-----l~~~~~-~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
++ +|++ ...++|+ .+. +....+ .+..+.|..++. |++..+.... .++.+++
T Consensus 467 --~g--~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~~--~v~~v~v 526 (591)
T PRK13616 467 --GG--KVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRSDPEH--PVWYVNL 526 (591)
T ss_pred --CC--EEEEEEEEeCCCCc-eeecccEEeecccCCccccceEecCCE-EEEEecCCCC--ceEEEec
Confidence 22 5655 4444554 221 222222 234677887766 6655554332 3677877
No 152
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.89 E-value=0.00021 Score=96.07 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=70.3
Q ss_pred CCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 431 NNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
..|.||++||..+... .|... ...|. .+|.|+.+|.||.|.....-............++++...+..+++. ..
T Consensus 1370 ~~~~vVllHG~~~s~~--~w~~~-~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~--l~ 1443 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE--DWIPI-MKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEH--IT 1443 (1655)
T ss_pred CCCeEEEECCCCCCHH--HHHHH-HHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHH--hC
Confidence 3578999999765443 34433 34455 3799999999998764321000000001122344554444444443 24
Q ss_pred CCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+++.++|+|+||.+++.++.++|++++.++...+
T Consensus 1444 ~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~ 1478 (1655)
T PLN02980 1444 PGKVTLVGYSMGARIALYMALRFSDKIEGAVIISG 1478 (1655)
T ss_pred CCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECC
Confidence 56899999999999999999999999998887765
No 153
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=97.89 E-value=7.5e-06 Score=86.41 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=42.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCc
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT 871 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 871 (1012)
++..|+|+++|++|+-+|..+-+++.++|+++|+ ++++.+||+.+|||..+.
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~-------~~~~~~y~ga~HgF~~~~ 194 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAGV-------DVEVHVYPGAGHGFANPS 194 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTT-------TEEEEEETT--TTTTSTT
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCC-------cEEEEECCCCcccccCCC
Confidence 5669999999999999999999999999999988 999999999999998763
No 154
>COG0627 Predicted esterase [General function prediction only]
Probab=97.88 E-value=8.9e-05 Score=81.39 Aligned_cols=232 Identities=16% Similarity=0.094 Sum_probs=126.0
Q ss_pred CCCCcEEEEEcCCCCCCCCCCc--ChhHHHHHHhCCeEEEEEcCC--------------CC-CCCchhHHhhhhcCCCcc
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGF--SVTKIVFLRDFNGIYAIPNIR--------------GG-GEYGERWHDGGRLLNKQN 491 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~d~R--------------G~-g~~g~~~~~~~~~~~~~~ 491 (1012)
..+.|++++.||-.... +.+ ........+..|++++.+|.. |+ .++..+|........ ..
T Consensus 51 ~~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~ 127 (316)
T COG0627 51 GRDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PY 127 (316)
T ss_pred CCCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-cc
Confidence 35567777777643221 111 111223344557777776322 32 244455554321111 23
Q ss_pred hHhHHHHH-HHHHHH-cCCCCC--CcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeecccccccC
Q psy1288 492 VFDDFQCA-AEYLIA-SGYTQS--SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNN 567 (1012)
Q Consensus 492 ~~~D~~a~-~~~l~~-~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~~ 567 (1012)
.+++++.. +-.++. ....+. ++.+|.|+||||+-++.++.++|++|..+.+.+| +-+...+
T Consensus 128 q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg---~~~~s~~------------ 192 (316)
T COG0627 128 QWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSG---ILSPSSP------------ 192 (316)
T ss_pred chhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccc---ccccccc------------
Confidence 34555432 222222 222333 3899999999999999999999999999999998 2221000
Q ss_pred cccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCC---
Q psy1288 568 MFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGK--- 644 (1012)
Q Consensus 568 ~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~--- 644 (1012)
+. +. +......-+..+...||...++ .+..++|..++.+-. ...
T Consensus 193 ---------~~--------~~----------~~~~~~~g~~~~~~~~G~~~~~----~w~~~D~~~~~~~l~--~~~~~~ 239 (316)
T COG0627 193 ---------WG--------PT----------LAMGDPWGGKAFNAMLGPDSDP----AWQENDPLSLIEKLV--ANANTR 239 (316)
T ss_pred ---------cc--------cc----------ccccccccCccHHHhcCCCccc----cccccCchhHHHHhh--hccccc
Confidence 00 00 0000000111222234544321 255666666554100 011
Q ss_pred ------CCCcEEEEeeCCCCCCC--hHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHH
Q psy1288 645 ------QYPATLLMTADHDDRVS--PVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFY 716 (1012)
Q Consensus 645 ------~~P~vLiihG~~D~~v~--~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl 716 (1012)
.-|.+++-+|..|.... ...+..+.+++.++ +.+..+...+++.|.+.- ....+.+.+.|+
T Consensus 240 ~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~-------g~~~~~~~~~~G~Hsw~~----w~~~l~~~~~~~ 308 (316)
T COG0627 240 IWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAA-------GIPNGVRDQPGGDHSWYF----WASQLADHLPWL 308 (316)
T ss_pred ceecccCCCccccccccchhhhhhcccCHHHHHHHHHhc-------CCCceeeeCCCCCcCHHH----HHHHHHHHHHHH
Confidence 33558888888876554 22367788888888 888888888889998643 234566777888
Q ss_pred HHhCCC
Q psy1288 717 LTSGPV 722 (1012)
Q Consensus 717 ~~~l~~ 722 (1012)
...++.
T Consensus 309 a~~l~~ 314 (316)
T COG0627 309 AGALGL 314 (316)
T ss_pred HHHhcc
Confidence 777654
No 155
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=97.84 E-value=9.2e-05 Score=84.20 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCc------hhHHhhh-------h-----cCCC--
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYG------ERWHDGG-------R-----LLNK-- 489 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g------~~~~~~~-------~-----~~~~-- 489 (1012)
++.|+||+.||-.+... .|+.. ..-|+++||+|++++.|-+.... ..-.... . ....
T Consensus 98 ~~~PvvIFSHGlgg~R~--~yS~~-~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRT--SYSAI-CGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp S-EEEEEEE--TT--TT--TTHHH-HHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCEEEEeCCCCcchh--hHHHH-HHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 67999999999765543 34443 45677789999999999553221 1100000 0 0000
Q ss_pred cc-----------hHhHHHHHHHHHHH--c------------------CCCCCCcEEEEecChHHHHHHHHHhhCCCcee
Q psy1288 490 QN-----------VFDDFQCAAEYLIA--S------------------GYTQSSRLAIQGGSNGGLLTAACINQRPDLFG 538 (1012)
Q Consensus 490 ~~-----------~~~D~~a~~~~l~~--~------------------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~ 538 (1012)
.. -..++..+++.|.+ . +.+|.++|+++|||+||..++.++.+. .+|+
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~ 253 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFK 253 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcc
Confidence 00 02355555555542 1 235678999999999999998888775 6789
Q ss_pred EEEEccC
Q psy1288 539 AAIVQVG 545 (1012)
Q Consensus 539 a~v~~~~ 545 (1012)
++|..-|
T Consensus 254 ~~I~LD~ 260 (379)
T PF03403_consen 254 AGILLDP 260 (379)
T ss_dssp EEEEES-
T ss_pred eEEEeCC
Confidence 9887766
No 156
>PRK05855 short chain dehydrogenase; Validated
Probab=97.81 E-value=0.00029 Score=86.20 Aligned_cols=107 Identities=10% Similarity=0.074 Sum_probs=64.3
Q ss_pred ECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCC
Q psy1288 409 PSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLN 488 (1012)
Q Consensus 409 ~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 488 (1012)
...||.+|.+..+-+ ...|.||++||...... .|... ...|. .||.|+.+|+||.|...... ..
T Consensus 8 ~~~~g~~l~~~~~g~------~~~~~ivllHG~~~~~~--~w~~~-~~~L~-~~~~Vi~~D~~G~G~S~~~~------~~ 71 (582)
T PRK05855 8 VSSDGVRLAVYEWGD------PDRPTVVLVHGYPDNHE--VWDGV-APLLA-DRFRVVAYDVRGAGRSSAPK------RT 71 (582)
T ss_pred EeeCCEEEEEEEcCC------CCCCeEEEEcCCCchHH--HHHHH-HHHhh-cceEEEEecCCCCCCCCCCC------cc
Confidence 345888887665421 23578999999764332 34433 44565 59999999999987542211 11
Q ss_pred CcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 489 KQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 489 ~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
...+++++...+..+++.-. ....+.++|||+||.+++.++.+
T Consensus 72 ~~~~~~~~a~dl~~~i~~l~-~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 72 AAYTLARLADDFAAVIDAVS-PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred cccCHHHHHHHHHHHHHHhC-CCCcEEEEecChHHHHHHHHHhC
Confidence 11234444444444443311 12349999999999888766654
No 157
>KOG0293|consensus
Probab=97.79 E-value=0.00099 Score=72.07 Aligned_cols=198 Identities=17% Similarity=0.143 Sum_probs=107.2
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec--ceeeeeeEEeeCCCeEEEEecCCCCCcc-cCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH--RLKFVSIAWTHDHKGVFYSNQEPKSKSK-KHSK 233 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~--~~~~~~~~WSpDG~~l~y~~~~~~~~g~-~~~~ 233 (1012)
--+-..++|++||++|=..... ..-||.+.-++.-.+.-|.. ......+.||||.++|+-...+....-. .+.+
T Consensus 225 dEVWfl~FS~nGkyLAsaSkD~---Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tg 301 (519)
T KOG0293|consen 225 DEVWFLQFSHNGKYLASASKDS---TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTG 301 (519)
T ss_pred CcEEEEEEcCCCeeEeeccCCc---eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcc
Confidence 3466889999999999655432 23566666555422222222 2235778999999988765433110000 0111
Q ss_pred CCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEE
Q psy1288 234 KNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILS 313 (1012)
Q Consensus 234 ~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 313 (1012)
+.. ..|.... .-.+....|-|||.++..-+ ++..++..|+++.....|+-+-.. .+..-....||+.++..
T Consensus 302 d~~-~~y~~~~-~~S~~sc~W~pDg~~~V~Gs----~dr~i~~wdlDgn~~~~W~gvr~~---~v~dlait~Dgk~vl~v 372 (519)
T KOG0293|consen 302 DLR-HLYPSGL-GFSVSSCAWCPDGFRFVTGS----PDRTIIMWDLDGNILGNWEGVRDP---KVHDLAITYDGKYVLLV 372 (519)
T ss_pred hhh-hhcccCc-CCCcceeEEccCCceeEecC----CCCcEEEecCCcchhhcccccccc---eeEEEEEcCCCcEEEEE
Confidence 100 0110000 01123456999999966554 446789999887655567543211 12222222354555444
Q ss_pred EEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 314 YIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 314 ~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
. . ..++.+++.++-..+..++. ...+..++.|.|++.+.+.. .+.++..+|++
T Consensus 373 ~-~--d~~i~l~~~e~~~dr~lise-~~~its~~iS~d~k~~LvnL----~~qei~LWDl~ 425 (519)
T KOG0293|consen 373 T-V--DKKIRLYNREARVDRGLISE-EQPITSFSISKDGKLALVNL----QDQEIHLWDLE 425 (519)
T ss_pred e-c--ccceeeechhhhhhhccccc-cCceeEEEEcCCCcEEEEEc----ccCeeEEeecc
Confidence 3 2 35677777743322223332 23356778888888776665 44578888884
No 158
>KOG4409|consensus
Probab=97.78 E-value=0.00034 Score=75.44 Aligned_cols=102 Identities=16% Similarity=0.060 Sum_probs=64.3
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchh-HHhhhhcCCCcchHhHHHHHH-HHHHHcCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGER-WHDGGRLLNKQNVFDDFQCAA-EYLIASGYT 509 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~-~~~~~~~~~~~~~~~D~~a~~-~~l~~~~~~ 509 (1012)
...+|++||-..... -|-.. ..-|+. ...|.++|..|.|...+- |.... ...-.-++..+ +|-.+.+.
T Consensus 90 ~~plVliHGyGAg~g--~f~~N-f~~La~-~~~vyaiDllG~G~SSRP~F~~d~-----~~~e~~fvesiE~WR~~~~L- 159 (365)
T KOG4409|consen 90 KTPLVLIHGYGAGLG--LFFRN-FDDLAK-IRNVYAIDLLGFGRSSRPKFSIDP-----TTAEKEFVESIEQWRKKMGL- 159 (365)
T ss_pred CCcEEEEeccchhHH--HHHHh-hhhhhh-cCceEEecccCCCCCCCCCCCCCc-----ccchHHHHHHHHHHHHHcCC-
Confidence 344666787322111 12222 334553 889999999997754332 11111 11112344443 45556543
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++.++|||+||+++...+.++|+++.-.|+..|
T Consensus 160 --~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP 193 (365)
T KOG4409|consen 160 --EKMILVGHSFGGYLAAKYALKYPERVEKLILVSP 193 (365)
T ss_pred --cceeEeeccchHHHHHHHHHhChHhhceEEEecc
Confidence 5899999999999999999999999998888776
No 159
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.74 E-value=0.00069 Score=79.93 Aligned_cols=105 Identities=12% Similarity=-0.004 Sum_probs=63.8
Q ss_pred cEEEEEcCCCCCCCCCCcC--hhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFS--VTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~--~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d 510 (1012)
+-||++|+......-.+.. .++..+|.++||.|+++|.||.+.....+. ......+++.++++++.+. ..
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~--~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI--TG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh--cC
Confidence 4466677753222111111 245677777899999999998764322110 1111224566777777654 35
Q ss_pred CCcEEEEecChHHHHHHH----HHhhC-CCceeEEEEccC
Q psy1288 511 SSRLAIQGGSNGGLLTAA----CINQR-PDLFGAAIVQVG 545 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~----~~~~~-p~~f~a~v~~~~ 545 (1012)
.+++.++|+|+||.++.. ++... ++++++++....
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t 300 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTT 300 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEec
Confidence 678999999999998532 23343 677777776655
No 160
>KOG0279|consensus
Probab=97.73 E-value=0.011 Score=61.42 Aligned_cols=189 Identities=13% Similarity=0.201 Sum_probs=107.5
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecCCCC-----Ccc
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKS-----KSK 229 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~-----~g~ 229 (1012)
...++...+|+||++. ++.+.++ .++++|+++|+.++.-.++ ...-++++|+|++.|+--+.+... .|.
T Consensus 63 sH~v~dv~~s~dg~~a-lS~swD~----~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ 137 (315)
T KOG0279|consen 63 SHFVSDVVLSSDGNFA-LSASWDG----TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV 137 (315)
T ss_pred ceEecceEEccCCceE-Eeccccc----eEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc
Confidence 4678999999999765 4555544 8999999999876543333 345789999999998755443211 111
Q ss_pred -----cCCC-CCc--eEEEEeec-----------------cc-------------cceeeeeeecCCCEEEEEECCCCCC
Q psy1288 230 -----KHSK-KNR--SSAYHLTV-----------------NV-------------APITSQYITNEGPQFVFKTNKDAPN 271 (1012)
Q Consensus 230 -----~~~~-~~~--~l~~~~~~-----------------~~-------------~~i~~~~~s~dg~~l~~~tn~~~~~ 271 (1012)
.+.. .+. .+.|+... |. .-+.+..+||||..++- ++..
T Consensus 138 ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas----Ggkd 213 (315)
T KOG0279|consen 138 CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS----GGKD 213 (315)
T ss_pred EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEec----CCCC
Confidence 0111 111 11111110 00 11235568999876544 4567
Q ss_pred ceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC-c--------eE
Q psy1288 272 YRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-V--------GT 342 (1012)
Q Consensus 272 ~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~--------~~ 342 (1012)
..++..|++.++ .+..-.....+....+.. +..++...-+ +.+.+|+++++.....+... . -.
T Consensus 214 g~~~LwdL~~~k-----~lysl~a~~~v~sl~fsp-nrywL~~at~--~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~ 285 (315)
T KOG0279|consen 214 GEAMLWDLNEGK-----NLYSLEAFDIVNSLCFSP-NRYWLCAATA--TSIKIWDLESKAVVEELKLDGIGPSSKAGDPI 285 (315)
T ss_pred ceEEEEEccCCc-----eeEeccCCCeEeeEEecC-CceeEeeccC--CceEEEeccchhhhhhccccccccccccCCcE
Confidence 889999998764 233233334555555444 3333332221 33888999766544433322 1 11
Q ss_pred EEeecccccCcEEEEEecC
Q psy1288 343 IVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 343 v~~~~~spdg~~l~~~~ss 361 (1012)
...++|+.||.+|+-.+++
T Consensus 286 clslaws~dG~tLf~g~td 304 (315)
T KOG0279|consen 286 CLSLAWSADGQTLFAGYTD 304 (315)
T ss_pred EEEEEEcCCCcEEEeeecC
Confidence 2356788888888766654
No 161
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.73 E-value=0.00034 Score=70.56 Aligned_cols=119 Identities=20% Similarity=0.084 Sum_probs=72.0
Q ss_pred EEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhh
Q psy1288 406 VFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGR 485 (1012)
Q Consensus 406 v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 485 (1012)
+.+..+||..+++..+...+ +.+-.+.+-|+.+.. ..|-..+.+.++.+||.|++.|+||.++....-.....
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~-----~~~g~~~va~a~Gv~--~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG-----KASGRLVVAGATGVG--QYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccccccCCC-----CCCCcEEecccCCcc--hhHhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 34567899999888774332 333334445554433 23444456777788999999999998865322111100
Q ss_pred cCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCC
Q psy1288 486 LLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRP 534 (1012)
Q Consensus 486 ~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 534 (1012)
-....=...|+.+++.++.+.... -.+..+|||+||.+...+. +++
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~~~--~P~y~vgHS~GGqa~gL~~-~~~ 126 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKALPG--HPLYFVGHSFGGQALGLLG-QHP 126 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhCCC--CceEEeeccccceeecccc-cCc
Confidence 011111235888888888875322 3467889999998755443 445
No 162
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.71 E-value=0.0015 Score=67.40 Aligned_cols=136 Identities=13% Similarity=0.131 Sum_probs=78.5
Q ss_pred CeeeCCEEEEEEE-c---CCCC---eeEEEEEeCCCCceEEE-cCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCce
Q psy1288 111 PQRQGDHYFFFHN-T---GLQN---HSVMYIQDSLDGEARVF-LDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDW 182 (1012)
Q Consensus 111 p~~dG~~~yy~~~-~---~~~~---~~~l~~~~~~~g~~~~L-~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~ 182 (1012)
+.+.|+++..... + .++. ...||+.+..+...+.+ ++ ....+.+++|||+|+++|.......
T Consensus 13 W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~-------~~~~I~~~~WsP~g~~favi~g~~~--- 82 (194)
T PF08662_consen 13 WQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELK-------KEGPIHDVAWSPNGNEFAVIYGSMP--- 82 (194)
T ss_pred ecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeecc-------CCCceEEEEECcCCCEEEEEEccCC---
Confidence 4478888776554 1 1111 24677776655443333 22 1124889999999999987764322
Q ss_pred EEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEee-------ccccceeeeeee
Q psy1288 183 TSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT-------VNVAPITSQYIT 255 (1012)
Q Consensus 183 ~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~-------~~~~~i~~~~~s 255 (1012)
..+.++|+++.... ++.......+.|||+|+.|+....... .|. -. ++... ..........||
T Consensus 83 ~~v~lyd~~~~~i~--~~~~~~~n~i~wsP~G~~l~~~g~~n~-~G~------l~-~wd~~~~~~i~~~~~~~~t~~~Ws 152 (194)
T PF08662_consen 83 AKVTLYDVKGKKIF--SFGTQPRNTISWSPDGRFLVLAGFGNL-NGD------LE-FWDVRKKKKISTFEHSDATDVEWS 152 (194)
T ss_pred cccEEEcCcccEeE--eecCCCceEEEECCCCCEEEEEEccCC-CcE------EE-EEECCCCEEeeccccCcEEEEEEc
Confidence 27888888743332 233333467899999999988763211 011 01 11110 000123344699
Q ss_pred cCCCEEEEEEC
Q psy1288 256 NEGPQFVFKTN 266 (1012)
Q Consensus 256 ~dg~~l~~~tn 266 (1012)
|||++|+..+.
T Consensus 153 PdGr~~~ta~t 163 (194)
T PF08662_consen 153 PDGRYLATATT 163 (194)
T ss_pred CCCCEEEEEEe
Confidence 99999988764
No 163
>KOG0271|consensus
Probab=97.71 E-value=0.0016 Score=69.97 Aligned_cols=62 Identities=23% Similarity=0.297 Sum_probs=44.8
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeeccee-eeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLK-FVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~-~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+-..+|||||++||= |+...+++++|+.+..+.-....... ...++|||||+.|+-...+
T Consensus 116 e~Vl~~~fsp~g~~l~t-----GsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~d 178 (480)
T KOG0271|consen 116 EAVLSVQFSPTGSRLVT-----GSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKD 178 (480)
T ss_pred CcEEEEEecCCCceEEe-----cCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccC
Confidence 45667899999999974 44456899999988766543333322 4679999999998776543
No 164
>KOG1454|consensus
Probab=97.69 E-value=0.00051 Score=76.66 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=62.9
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYT 509 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~ 509 (1012)
...|.|+.+||-... ...|......+....|+.|..+|..|.|..+ +.+.+ ..-...+....+..+......
T Consensus 56 ~~~~pvlllHGF~~~--~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s--~~~~~----~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGAS--SFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS--PLPRG----PLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccCC--cccHhhhccccccccceEEEEEecCCCCcCC--CCCCC----CceehhHHHHHHHHHHHhhcC
Confidence 456789999995432 2344433322333336999999999955321 11111 112334444444433333222
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCCCceeEEE
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRPDLFGAAI 541 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 541 (1012)
.++.++|+|+||+++..++..+|+.....+
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv 157 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLV 157 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCccccccee
Confidence 348899999999999999999999988877
No 165
>KOG2112|consensus
Probab=97.67 E-value=0.00045 Score=69.30 Aligned_cols=61 Identities=18% Similarity=0.054 Sum_probs=51.3
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHH
Q psy1288 645 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLT 718 (1012)
Q Consensus 645 ~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~ 718 (1012)
+++++++.||..|+.||.....+....|+.. +..++++.|++-+|... -+++.++..|+.+
T Consensus 143 ~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~-------~~~~~f~~y~g~~h~~~------~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 143 NYTPILLCHGTADPLVPFRFGEKSAQFLKSL-------GVRVTFKPYPGLGHSTS------PQELDDLKSWIKT 203 (206)
T ss_pred CcchhheecccCCceeehHHHHHHHHHHHHc-------CCceeeeecCCcccccc------HHHHHHHHHHHHH
Confidence 3556999999999999999999999999988 77799999999999643 3566777788876
No 166
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.67 E-value=0.025 Score=63.27 Aligned_cols=99 Identities=16% Similarity=0.176 Sum_probs=58.2
Q ss_pred eCCEEEEEEEcCC-CCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEe-----CCCCceEEEEE
Q psy1288 114 QGDHYFFFHNTGL-QNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLS-----SSGSDWTSMHF 187 (1012)
Q Consensus 114 dG~~~yy~~~~~~-~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~-----~~G~~~~~L~v 187 (1012)
++. .+|+.+... .....+++.+....+..--++. |.. -.. .+||||+.|..... ..|.+.-.|-+
T Consensus 11 ~~~-~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~------G~~-P~~-~~spDg~~lyva~~~~~R~~~G~~~d~V~v 81 (352)
T TIGR02658 11 DAR-RVYVLDPGHFAATTQVYTIDGEAGRVLGMTDG------GFL-PNP-VVASDGSFFAHASTVYSRIARGKRTDYVEV 81 (352)
T ss_pred CCC-EEEEECCcccccCceEEEEECCCCEEEEEEEc------cCC-Cce-eECCCCCEEEEEeccccccccCCCCCEEEE
Confidence 444 466665431 1125788888755432222221 221 122 49999999977766 12333448999
Q ss_pred EECCCCceece-eecc-------eeeeeeEEeeCCCeEEEEe
Q psy1288 188 KDVATGKEYPE-VLHR-------LKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 188 ~dl~tg~~~~~-t~~~-------~~~~~~~WSpDG~~l~y~~ 221 (1012)
+|+++++.... .++. .....++.|||||.||...
T Consensus 82 ~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n 123 (352)
T TIGR02658 82 IDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQ 123 (352)
T ss_pred EECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEec
Confidence 99999987642 2211 1124789999999887654
No 167
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.67 E-value=0.00017 Score=78.74 Aligned_cols=111 Identities=10% Similarity=0.014 Sum_probs=73.4
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHH-HHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKI-VFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY 508 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~ 508 (1012)
...|++|++||..+.. ...|..... .++...++.|+++|+++...... ..... ......+++...+++|.+...
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y--~~a~~--~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANPNY--PQAVN--NTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECccccccCh--HHHHH--hHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999965433 123332222 35554579999999987632211 11100 001112456666777777645
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+.+++.++|||+||.+++.++.+.|+++..++...|
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDP 145 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDP 145 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecC
Confidence 6778999999999999999999998988888888766
No 168
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.66 E-value=0.029 Score=62.75 Aligned_cols=246 Identities=12% Similarity=0.065 Sum_probs=121.4
Q ss_pred CCeeeCCEEEEEEE-----cCCCCeeEEEEEeCCCCceEEEcCC-CC-CCCCCceEeeeEEECCCCcEEEEEEeCCCCce
Q psy1288 110 SPQRQGDHYFFFHN-----TGLQNHSVMYIQDSLDGEARVFLDP-NN-LSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDW 182 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~-----~~~~~~~~l~~~~~~~g~~~~L~D~-n~-la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~ 182 (1012)
..+|||+.+|-... .-++....|-..+....+...=+.. .. ...-+ .....+.+|||||+|... +... .
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~-~~~~~~~ls~dgk~l~V~-n~~p--~ 127 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG-TYPWMTSLTPDNKTLLFY-QFSP--S 127 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc-CccceEEECCCCCEEEEe-cCCC--C
Confidence 36699998775543 1122223455555544332211110 00 00001 123378999999998643 3322 2
Q ss_pred EEEEEEECCCCceece-eeccee-------eeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccce-eeee
Q psy1288 183 TSMHFKDVATGKEYPE-VLHRLK-------FVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPI-TSQY 253 (1012)
Q Consensus 183 ~~L~v~dl~tg~~~~~-t~~~~~-------~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i-~~~~ 253 (1012)
..+-++|+++++.... ..+.+. .....-+.||+.+.++........ .....+++.. ...+ .-+.
T Consensus 128 ~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~-----~~~~~vf~~~--~~~v~~rP~ 200 (352)
T TIGR02658 128 PAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPK-----IKPTEVFHPE--DEYLINHPA 200 (352)
T ss_pred CEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceE-----EeeeeeecCC--ccccccCCc
Confidence 3789999999987642 222221 112233467765555433211000 0001111100 0000 1112
Q ss_pred eecCCCEEEEEECCCCCCceEEEEeCCCCcc---cCcEEeeccCC---Cce--eeeeEE-ecCCEEEEEEEc-------C
Q psy1288 254 ITNEGPQFVFKTNKDAPNYRLITIDFDNFAE---SNWKTLIEENK---DDV--LDWATC-VANDKLILSYIH-------H 317 (1012)
Q Consensus 254 ~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~---~~~~~l~~~~~---~~~--~~~~~~-~~~~~l~~~~~~-------~ 317 (1012)
+++.+++.+|.++. ..++.+|+.+.+. ..|..+..... +.. .+.+.. .+++++|+.... +
T Consensus 201 ~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~ 276 (352)
T TIGR02658 201 YSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKT 276 (352)
T ss_pred eEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccC
Confidence 45533455555554 6789998754321 12332222111 010 112333 355777775432 2
Q ss_pred ceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 318 VKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 318 g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+..+++++|..+++....+.... ...++.+++|++-++|..+.. ...|..+|.
T Consensus 277 ~~~~V~ViD~~t~kvi~~i~vG~-~~~~iavS~Dgkp~lyvtn~~--s~~VsViD~ 329 (352)
T TIGR02658 277 ASRFLFVVDAKTGKRLRKIELGH-EIDSINVSQDAKPLLYALSTG--DKTLYIFDA 329 (352)
T ss_pred CCCEEEEEECCCCeEEEEEeCCC-ceeeEEECCCCCeEEEEeCCC--CCcEEEEEC
Confidence 23689999998888777776543 344778899999455555542 345889998
No 169
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.65 E-value=0.0028 Score=65.32 Aligned_cols=148 Identities=9% Similarity=0.092 Sum_probs=84.8
Q ss_pred eeEEECCCCcEEEEEEeCC----CC---ceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecCCCCCcccC
Q psy1288 160 GSYSFSEDGKTLAYCLSSS----GS---DWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSKKH 231 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~----G~---~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~~~ 231 (1012)
..+.|+|+|++|++.++.. +. ....||.++..+.......+.. .....++|+|+|+.|+.+....
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~------- 81 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSM------- 81 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccC-------
Confidence 4689999999999988832 21 2358899987766554443332 2368899999999988775210
Q ss_pred CCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEE
Q psy1288 232 SKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLI 311 (1012)
Q Consensus 232 ~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 311 (1012)
..++.+ +...++. +..+ .......+. ..++|+.++
T Consensus 82 ---~~~v~l-------------yd~~~~~-------------i~~~--------------~~~~~n~i~--wsP~G~~l~ 116 (194)
T PF08662_consen 82 ---PAKVTL-------------YDVKGKK-------------IFSF--------------GTQPRNTIS--WSPDGRFLV 116 (194)
T ss_pred ---CcccEE-------------EcCcccE-------------eEee--------------cCCCceEEE--ECCCCCEEE
Confidence 001100 1111111 1111 011111121 234556676
Q ss_pred EEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecC
Q psy1288 312 LSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 312 ~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss 361 (1012)
+....+....|.+||..+.+.... .....+..+.|||||+.++...+.
T Consensus 117 ~~g~~n~~G~l~~wd~~~~~~i~~--~~~~~~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 117 LAGFGNLNGDLEFWDVRKKKKIST--FEHSDATDVEWSPDGRYLATATTS 164 (194)
T ss_pred EEEccCCCcEEEEEECCCCEEeec--cccCcEEEEEEcCCCCEEEEEEec
Confidence 666555557789999865443322 223345678999999998876654
No 170
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.64 E-value=0.00052 Score=71.95 Aligned_cols=135 Identities=21% Similarity=0.255 Sum_probs=75.2
Q ss_pred EECCC-CceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCe-EEEEEcCCC---------CCCC
Q psy1288 408 YPSKD-GTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNG-IYAIPNIRG---------GGEY 476 (1012)
Q Consensus 408 ~~s~D-G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~-~v~~~d~RG---------~g~~ 476 (1012)
+.|.+ |+.-.+++..|++..++.++|+|.+..|..-.. ........++++.-. +.+...++. ...|
T Consensus 14 l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~vf~---~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~~r~~Dy 90 (264)
T COG2819 14 LKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGNAVFN---ALTEIMLRILADLPPPVIVGIGYETILVFDPNRRAYDY 90 (264)
T ss_pred eeecCCCcEEEEEecCCCCCCCCCCCcEEEEecchhhhc---hHHHHhhhhhhcCCCceEEEeccccccccccccccccC
Confidence 34444 455667888999887777799877766642111 111112333433211 122222222 1111
Q ss_pred ch----hHHhhh----hcC-CCcchHhHH-HHHHHHHHHcC-CCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 477 GE----RWHDGG----RLL-NKQNVFDDF-QCAAEYLIASG-YTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 477 g~----~~~~~~----~~~-~~~~~~~D~-~a~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
-. ...... ... .+...|..| ..-+.-.++.. .++.++.+++|||+||+.++.++..+|+.|....+.+|
T Consensus 91 Tp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SP 170 (264)
T COG2819 91 TPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISP 170 (264)
T ss_pred CCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecc
Confidence 00 000000 011 111223333 33344445554 47899999999999999999999999999999999988
No 171
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.63 E-value=0.031 Score=63.34 Aligned_cols=244 Identities=14% Similarity=0.130 Sum_probs=117.4
Q ss_pred CCCCCCeeeCCEEEEEEEcC-CCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEE
Q psy1288 106 PKYSSPQRQGDHYFFFHNTG-LQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTS 184 (1012)
Q Consensus 106 ~~~s~p~~dG~~~yy~~~~~-~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~ 184 (1012)
+.+-...++++++|-..... ..+.-..|..+...+..+.+-.. ...|. ....+.++|||++|.. ++..++ .
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~---~~~g~-~p~~i~~~~~g~~l~v-any~~g---~ 110 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSV---PSGGS-SPCHIAVDPDGRFLYV-ANYGGG---S 110 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEE---EESSS-CEEEEEECTTSSEEEE-EETTTT---E
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeee---ccCCC-CcEEEEEecCCCEEEE-EEccCC---e
Confidence 34444456777666654322 23344455555544554443221 10111 2346789999999865 444332 5
Q ss_pred EEEEECCC-Cceece--ee------------cceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeec-----
Q psy1288 185 MHFKDVAT-GKEYPE--VL------------HRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTV----- 244 (1012)
Q Consensus 185 L~v~dl~t-g~~~~~--t~------------~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~----- 244 (1012)
+.+++++. |..... .. .......+.++|||+.++... .+. +...+|....
T Consensus 111 v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~d-lG~---------D~v~~~~~~~~~~~l 180 (345)
T PF10282_consen 111 VSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPD-LGA---------DRVYVYDIDDDTGKL 180 (345)
T ss_dssp EEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEE-TTT---------TEEEEEEE-TTS-TE
T ss_pred EEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEe-cCC---------CEEEEEEEeCCCceE
Confidence 67777765 443221 11 111235789999999876543 221 1111111110
Q ss_pred ---------cccceeeeeeecCCCEEEEEECCCCCCceEEEEeCC--CCcccCcEEe--eccCC-Cc-eeeee-EEecCC
Q psy1288 245 ---------NVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFD--NFAESNWKTL--IEENK-DD-VLDWA-TCVAND 308 (1012)
Q Consensus 245 ---------~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~--~~~~~~~~~l--~~~~~-~~-~~~~~-~~~~~~ 308 (1012)
...+.+...++|+|+.+|+..... ..|..+++. .+.......+ ++... .. ....+ ...+++
T Consensus 181 ~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s---~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~ 257 (345)
T PF10282_consen 181 TPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS---NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGR 257 (345)
T ss_dssp EEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT---TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSS
T ss_pred EEeeccccccCCCCcEEEEcCCcCEEEEecCCC---CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCC
Confidence 012333456999999999987543 334444443 3321111111 11111 11 12222 334667
Q ss_pred EEEEEEEcCceEEEEEEec--CCCcee--eeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 309 KLILSYIHHVKNVMHLHDL--ASGKHL--YTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl--~~G~~~--~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.||++.+.. ..|.++++ ++|+.. ..++.....-..+.++|+|+.|++.... ..--.+|.+|.
T Consensus 258 ~lyvsnr~~--~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~-s~~v~vf~~d~ 323 (345)
T PF10282_consen 258 FLYVSNRGS--NSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQD-SNTVSVFDIDP 323 (345)
T ss_dssp EEEEEECTT--TEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETT-TTEEEEEEEET
T ss_pred EEEEEeccC--CEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCeEEEEEEeC
Confidence 777766543 45566665 345432 1222211124567789999988876533 33345667776
No 172
>KOG0293|consensus
Probab=97.62 E-value=0.0019 Score=69.89 Aligned_cols=99 Identities=14% Similarity=0.112 Sum_probs=59.5
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA 191 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~ 191 (1012)
+++|++++=.+.+ ....||....+ ..-+...-. .+....+....||||.++++--.. ++ .++++|+.
T Consensus 233 S~nGkyLAsaSkD---~Taiiw~v~~d-~~~kl~~tl----vgh~~~V~yi~wSPDdryLlaCg~---~e--~~~lwDv~ 299 (519)
T KOG0293|consen 233 SHNGKYLASASKD---STAIIWIVVYD-VHFKLKKTL----VGHSQPVSYIMWSPDDRYLLACGF---DE--VLSLWDVD 299 (519)
T ss_pred cCCCeeEeeccCC---ceEEEEEEecC-cceeeeeee----ecccCceEEEEECCCCCeEEecCc---hH--heeeccCC
Confidence 3677766654332 34667765432 221111110 112356889999999999763322 12 49999999
Q ss_pred CCceeceeecc--eeeeeeEEeeCCCeEEEEecC
Q psy1288 192 TGKEYPEVLHR--LKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 192 tg~~~~~t~~~--~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
+|+.+.+-..+ ...++.+|-|||.+++-.+.+
T Consensus 300 tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 300 TGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred cchhhhhcccCcCCCcceeEEccCCceeEecCCC
Confidence 99976532222 345789999999987655433
No 173
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.57 E-value=0.0011 Score=68.48 Aligned_cols=114 Identities=20% Similarity=0.177 Sum_probs=78.9
Q ss_pred eEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHh
Q psy1288 415 KIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFD 494 (1012)
Q Consensus 415 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 494 (1012)
..+..++.|.. .+.+|+|++.||-.-. ..|-...++-+++.||+|+.++.-.... ..+...++
T Consensus 32 PkpLlI~tP~~---~G~yPVilF~HG~~l~---ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~~~~Ei~ 94 (307)
T PF07224_consen 32 PKPLLIVTPSE---AGTYPVILFLHGFNLY---NSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PDGQDEIK 94 (307)
T ss_pred CCCeEEecCCc---CCCccEEEEeechhhh---hHHHHHHHHHHhhcCeEEEechhhcccC-----------CCchHHHH
Confidence 45677888876 6899999999996432 2333345677788999999999753211 22334456
Q ss_pred HHHHHHHHHHHc--------CCCCCCcEEEEecChHHHHHHHHHhhC-CC-ceeEEEEccC
Q psy1288 495 DFQCAAEYLIAS--------GYTQSSRLAIQGGSNGGLLTAACINQR-PD-LFGAAIVQVG 545 (1012)
Q Consensus 495 D~~a~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~-~f~a~v~~~~ 545 (1012)
+....++||-.. -..+.+++++.|||.||-.+.+++..+ .+ .|.+.|..-|
T Consensus 95 ~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDP 155 (307)
T PF07224_consen 95 SAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDP 155 (307)
T ss_pred HHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccc
Confidence 677778887654 235778999999999999988877654 22 3566665555
No 174
>KOG1552|consensus
Probab=97.55 E-value=0.00038 Score=72.24 Aligned_cols=165 Identities=13% Similarity=0.062 Sum_probs=96.8
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccc-cchhhhhHHHHHHHHhCCCCCC
Q psy1288 647 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTT-KQFPLTIPVIYFYLTSGPVLQR 725 (1012)
Q Consensus 647 P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~-~~~~~~~~~~~fl~~~l~~~~~ 725 (1012)
+.+|..||. +...++...++..|.... +..+.-+-|.+-|-.-|++.. ...++...+++||.+.-+.
T Consensus 61 ~~lly~hGN---a~Dlgq~~~~~~~l~~~l------n~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~--- 128 (258)
T KOG1552|consen 61 PTLLYSHGN---AADLGQMVELFKELSIFL------NCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGS--- 128 (258)
T ss_pred eEEEEcCCc---ccchHHHHHHHHHHhhcc------cceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCC---
Confidence 448888887 445567777777775531 344444445443333333322 2457777778888877541
Q ss_pred CCCCCCCc--cCCccccc------cCccceeeeccccccccchhhhcccccCCCCC-CCCCCCcccCCCCCChhhhhHhH
Q psy1288 726 YPETPNKA--DGSENVRN------QDQKLYYHYLGTDQKDDILIAEVLDMLKFNKF-TIGYFWESDYGSPANSSQFEYLL 796 (1012)
Q Consensus 726 ~~d~~~~~--GgS~g~~~------~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 796 (1012)
..++. |-|-|... ..+ -.+++- ++++++.++.... ..-.+|+..|
T Consensus 129 ---~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL--------~SPf~S~~rv~~~~~~~~~~~d~f------------- 182 (258)
T KOG1552|consen 129 ---PERIILYGQSIGTVPTVDLASRYP--LAAVVL--------HSPFTSGMRVAFPDTKTTYCFDAF------------- 182 (258)
T ss_pred ---CceEEEEEecCCchhhhhHhhcCC--cceEEE--------eccchhhhhhhccCcceEEeeccc-------------
Confidence 23333 77766211 111 111111 3355554443221 1222333222
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 797 GYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 797 ~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+=+.++. .|+.|+||+||+.|..||..++.++|.+++.. ++-....+.||-..
T Consensus 183 --~~i~kI~-------~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~----------~epl~v~g~gH~~~ 235 (258)
T KOG1552|consen 183 --PNIEKIS-------KITCPVLIIHGTDDEVVDFSHGKALYERCKEK----------VEPLWVKGAGHNDI 235 (258)
T ss_pred --cccCcce-------eccCCEEEEecccCceecccccHHHHHhcccc----------CCCcEEecCCCccc
Confidence 2266777 78899999999999999999999999999884 44445567888654
No 175
>KOG2564|consensus
Probab=97.54 E-value=0.00034 Score=72.51 Aligned_cols=115 Identities=18% Similarity=0.243 Sum_probs=71.3
Q ss_pred EEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 405 QVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 405 ~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
.+.+.+.|+ .+..++..|. ...-|+++..|||....+ .|..-...+.......++++|.||+|+.--.-.+
T Consensus 52 dv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~L--SfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~-- 122 (343)
T KOG2564|consen 52 DVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSAL--SFAIFASELKSKIRCRCLALDLRGHGETKVENED-- 122 (343)
T ss_pred ccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccch--hHHHHHHHHHhhcceeEEEeeccccCccccCChh--
Confidence 344444444 4555555553 345689999999865554 3443323333333567799999999864221111
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
.........|+.+.++++... .+.+|.++|||+||.++...+.+
T Consensus 123 -dlS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 123 -DLSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred -hcCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 122234457888888777654 45679999999999988766544
No 176
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.54 E-value=0.00097 Score=66.96 Aligned_cols=57 Identities=18% Similarity=0.237 Sum_probs=38.6
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHH
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFY 716 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl 716 (1012)
...| -+++.+.+|+.|++..+.++..++.+. +...+++||...... ...+..+++.|
T Consensus 113 l~~~-~~viaS~nDp~vp~~~a~~~A~~l~a~------------~~~~~~~GHf~~~~G---~~~~p~~~~~l 169 (171)
T PF06821_consen 113 LPFP-SIVIASDNDPYVPFERAQRLAQRLGAE------------LIILGGGGHFNAASG---FGPWPEGLDLL 169 (171)
T ss_dssp HHCC-EEEEEETTBSSS-HHHHHHHHHHHT-E------------EEEETS-TTSSGGGT---HSS-HHHHHHH
T ss_pred cCCC-eEEEEcCCCCccCHHHHHHHHHHcCCC------------eEECCCCCCcccccC---CCchHHHHHHh
Confidence 3455 488999999999999999988888664 788899999765433 23344444444
No 177
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.53 E-value=0.00018 Score=77.22 Aligned_cols=109 Identities=16% Similarity=0.093 Sum_probs=65.0
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCC-CCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC--C
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRG-GGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY--T 509 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG-~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~--~ 509 (1012)
-+||++-|-...-.+..|-......|...||.++.+..+- ..++|..-.+ ++.+|+.++++||..... .
T Consensus 34 ~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~--------~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 34 NALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLD--------RDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HH--------HHHHHHHHHHHHHHHHS----
T ss_pred cEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhh--------hHHHHHHHHHHHHHHhhcccc
Confidence 3677776633333344555555666766699999999874 3344432222 346799999999998842 3
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCC-----CceeEEEEccCCCccccC
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRP-----DLFGAAIVQVGNPEISDC 552 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p-----~~f~a~v~~~~~~~i~d~ 552 (1012)
..++|.++|||-|.--++..+.... ..+.++|+++| |||-
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQAp---VSDR 150 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAP---VSDR 150 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE------T
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCC---CCCh
Confidence 6789999999999999988877642 46889999999 8884
No 178
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.53 E-value=0.048 Score=58.58 Aligned_cols=216 Identities=15% Similarity=0.116 Sum_probs=118.5
Q ss_pred CCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEEC-CCCcEEEEEEeCCCCceEEEEEEECCCC
Q psy1288 115 GDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFS-EDGKTLAYCLSSSGSDWTSMHFKDVATG 193 (1012)
Q Consensus 115 G~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~S-PDGk~iAy~~~~~G~~~~~L~v~dl~tg 193 (1012)
.+.+||+-... ..|++.+..++..+.+.-+ + ..+..+. +||+.++ .+.. .+.++|+++|
T Consensus 11 ~g~l~~~D~~~----~~i~~~~~~~~~~~~~~~~------~---~~G~~~~~~~g~l~v--~~~~-----~~~~~d~~~g 70 (246)
T PF08450_consen 11 DGRLYWVDIPG----GRIYRVDPDTGEVEVIDLP------G---PNGMAFDRPDGRLYV--ADSG-----GIAVVDPDTG 70 (246)
T ss_dssp TTEEEEEETTT----TEEEEEETTTTEEEEEESS------S---EEEEEEECTTSEEEE--EETT-----CEEEEETTTT
T ss_pred CCEEEEEEcCC----CEEEEEECCCCeEEEEecC------C---CceEEEEccCCEEEE--EEcC-----ceEEEecCCC
Confidence 67788874332 5799988876665543221 2 3344555 7765433 3332 2455699999
Q ss_pred ceeceee------cceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc-----ccee---eeeeecCCC
Q psy1288 194 KEYPEVL------HRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV-----APIT---SQYITNEGP 259 (1012)
Q Consensus 194 ~~~~~t~------~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~-----~~i~---~~~~s~dg~ 259 (1012)
+...+.. ........+..|||+ |+++......... .....++.....+. .++. -..|+|||+
T Consensus 71 ~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~---~~~g~v~~~~~~~~~~~~~~~~~~pNGi~~s~dg~ 146 (246)
T PF08450_consen 71 KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASG---IDPGSVYRIDPDGKVTVVADGLGFPNGIAFSPDGK 146 (246)
T ss_dssp EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTC---GGSEEEEEEETTSEEEEEEEEESSEEEEEEETTSS
T ss_pred cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCcccc---ccccceEEECCCCeEEEEecCcccccceEECCcch
Confidence 7654322 123457789999998 7777543211000 00022333322211 1111 225899999
Q ss_pred EEEEEECCCCCCceEEEEeCCCCcc-cCcEEeeccCCCc--eeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeee
Q psy1288 260 QFVFKTNKDAPNYRLITIDFDNFAE-SNWKTLIEENKDD--VLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTF 336 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~~~~~-~~~~~l~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l 336 (1012)
.||+.-. ...+|++++++.... -.-++++.+.... ....+.....+.|++.... ..+|++++. +|+....+
T Consensus 147 ~lyv~ds---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~--~~~I~~~~p-~G~~~~~i 220 (246)
T PF08450_consen 147 TLYVADS---FNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWG--GGRIVVFDP-DGKLLREI 220 (246)
T ss_dssp EEEEEET---TTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEET--TTEEEEEET-TSCEEEEE
T ss_pred heeeccc---ccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcC--CCEEEEECC-CccEEEEE
Confidence 9998654 346799998864321 0112333222221 3455555544677776553 357889998 48877778
Q ss_pred cCCceEEEeecc-cccCcEEEEEec
Q psy1288 337 PLDVGTIVGFSG-KKKYSEIFYSFM 360 (1012)
Q Consensus 337 ~~~~~~v~~~~~-spdg~~l~~~~s 360 (1012)
..|....+.+.+ .++.++|+++..
T Consensus 221 ~~p~~~~t~~~fgg~~~~~L~vTta 245 (246)
T PF08450_consen 221 ELPVPRPTNCAFGGPDGKTLYVTTA 245 (246)
T ss_dssp E-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred cCCCCCEEEEEEECCCCCEEEEEeC
Confidence 777335556666 467788988764
No 179
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.49 E-value=0.00043 Score=80.22 Aligned_cols=40 Identities=10% Similarity=-0.202 Sum_probs=32.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKA 863 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 863 (1012)
++..|+|++||++|..||+.+++.+..+. . ...++++|+.
T Consensus 353 ~i~~PvLiI~G~~D~ivP~~~a~~l~~~~----~-------~~~l~~i~~~ 392 (414)
T PRK05077 353 RCPTPMLSGYWKNDPFSPEEDSRLIASSS----A-------DGKLLEIPFK 392 (414)
T ss_pred CCCCcEEEEecCCCCCCCHHHHHHHHHhC----C-------CCeEEEccCC
Confidence 68899999999999999999999765433 1 4467788775
No 180
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.44 E-value=0.00033 Score=73.52 Aligned_cols=32 Identities=16% Similarity=0.175 Sum_probs=28.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHH
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEK 844 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~ 844 (1012)
...+|++|+||.+|.-||+..+.+++++|++.
T Consensus 166 ~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 166 GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 34466889999999999999999999999997
No 181
>KOG3847|consensus
Probab=97.43 E-value=0.0026 Score=67.06 Aligned_cols=113 Identities=21% Similarity=0.188 Sum_probs=66.4
Q ss_pred CCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCC--------------chhHHhhhh--cCCC---
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEY--------------GERWHDGGR--LLNK--- 489 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~--------------g~~~~~~~~--~~~~--- 489 (1012)
+.++|++|+.||-.+.. .-|+.- -.-|+++||+|+++..|-...- -..|..-.. ...+
T Consensus 115 ~~k~PvvvFSHGLggsR--t~YSa~-c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~ 191 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSR--TLYSAY-CTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFH 191 (399)
T ss_pred CCCccEEEEecccccch--hhHHHH-hhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEE
Confidence 57899999999954433 234433 2346778999999999864421 112211000 0000
Q ss_pred -cch-----HhHHHHHHHHHHH---------------------cCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEE
Q psy1288 490 -QNV-----FDDFQCAAEYLIA---------------------SGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIV 542 (1012)
Q Consensus 490 -~~~-----~~D~~a~~~~l~~---------------------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 542 (1012)
.+. .+.+..++.-+.+ .+.++..+++|+|||+||..++.....+ ..|+++|+
T Consensus 192 irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~ 270 (399)
T KOG3847|consen 192 IRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIA 270 (399)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeee
Confidence 010 1233333332221 1345678899999999998887777664 46888887
Q ss_pred ccC
Q psy1288 543 QVG 545 (1012)
Q Consensus 543 ~~~ 545 (1012)
.-+
T Consensus 271 lD~ 273 (399)
T KOG3847|consen 271 LDA 273 (399)
T ss_pred eee
Confidence 755
No 182
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.42 E-value=0.00058 Score=74.74 Aligned_cols=127 Identities=16% Similarity=0.118 Sum_probs=82.1
Q ss_pred EEEECCC-CceEEEEEEEeCCCC---CCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHH
Q psy1288 406 VFYPSKD-GTKIPMFILSRKGAQ---LDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWH 481 (1012)
Q Consensus 406 v~~~s~D-G~~i~~~l~~p~~~~---~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 481 (1012)
+++..+. +.+++..++.|.... ...+.|+|++.||...... +|.. ..+.+++.||+|+.++..|+..-+..-.
T Consensus 41 i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~--~f~~-~A~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 41 ITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVT--GFAW-LAEHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred EeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCcc--chhh-hHHHHhhCceEEEeccCCCcccccCChh
Confidence 3444432 566777777776542 1247899999999644322 3332 2345677899999999998664332222
Q ss_pred hhhhcC----CCcchHhHHHHHHHHHHHc---C----CCCCCcEEEEecChHHHHHHHHHhhCCC
Q psy1288 482 DGGRLL----NKQNVFDDFQCAAEYLIAS---G----YTQSSRLAIQGGSNGGLLTAACINQRPD 535 (1012)
Q Consensus 482 ~~~~~~----~~~~~~~D~~a~~~~l~~~---~----~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 535 (1012)
..+... ....-..|+...+++|... + .+|+.+|+++|||+||+.++.++..+.+
T Consensus 118 ~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 118 YAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 222111 1112245888888888776 3 4788999999999999998887765443
No 183
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.41 E-value=0.0052 Score=62.50 Aligned_cols=49 Identities=20% Similarity=0.312 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccc
Q psy1288 495 DFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEIS 550 (1012)
Q Consensus 495 D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~ 550 (1012)
...+.+..+++.. .++.+.++|.|+||+.+..++.+.+ .++ |.. ||.+.
T Consensus 44 ~a~~~l~~~i~~~--~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLi--NPav~ 92 (187)
T PF05728_consen 44 EAIAQLEQLIEEL--KPENVVLIGSSLGGFYATYLAERYG--LPA-VLI--NPAVR 92 (187)
T ss_pred HHHHHHHHHHHhC--CCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEE--cCCCC
Confidence 3444455555543 3345999999999999998887764 334 555 44443
No 184
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.0014 Score=69.74 Aligned_cols=123 Identities=14% Similarity=0.086 Sum_probs=72.4
Q ss_pred eEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhC---CeEEEEEcCCCCCCCchhHHhhhhcCCCcc
Q psy1288 415 KIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDF---NGIYAIPNIRGGGEYGERWHDGGRLLNKQN 491 (1012)
Q Consensus 415 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~---G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 491 (1012)
+....++.|.++.+..++|+++..||-.......- ....-.++.+. ..+++.+++--.......+ ....
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~-------~~n~ 152 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREEL-------HCNE 152 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHh-------cccH
Confidence 44567788888888899999999998532222111 11223344431 2566666653211111111 1111
Q ss_pred hHhHHHH-H-HHHHHHc--CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 492 VFDDFQC-A-AEYLIAS--GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 492 ~~~D~~a-~-~~~l~~~--~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.+.++++ . +=++.+. ..-+++.-+++|.|+||+.++.++.++|++|..+++.+|
T Consensus 153 ~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sp 210 (299)
T COG2382 153 AYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSG 210 (299)
T ss_pred HHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCC
Confidence 1222211 1 1222222 124567778999999999999999999999999999999
No 185
>KOG0291|consensus
Probab=97.36 E-value=0.018 Score=67.18 Aligned_cols=186 Identities=13% Similarity=0.128 Sum_probs=103.6
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee-ceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY-PEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKN 235 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~-~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~ 235 (1012)
..+..+.|+--|.+|||....-| +|-|++..+..-. ...-.-.....++.||||+.|+-...+++..-......-
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klg----QLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf 383 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLG----QLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF 383 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccc----eEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce
Confidence 35668889999999999988755 7777777665432 111112234789999999988766655331000000000
Q ss_pred ceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEE
Q psy1288 236 RSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYI 315 (1012)
Q Consensus 236 ~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~ 315 (1012)
.-+.|.+.. .++....|+..|..++-.+-+ +.+-..|+.... ++++.+...+..... +.....+.|+....
T Consensus 384 C~vTFteHt--s~Vt~v~f~~~g~~llssSLD----GtVRAwDlkRYr--NfRTft~P~p~Qfsc-vavD~sGelV~AG~ 454 (893)
T KOG0291|consen 384 CFVTFTEHT--SGVTAVQFTARGNVLLSSSLD----GTVRAWDLKRYR--NFRTFTSPEPIQFSC-VAVDPSGELVCAGA 454 (893)
T ss_pred EEEEeccCC--CceEEEEEEecCCEEEEeecC----CeEEeeeecccc--eeeeecCCCceeeeE-EEEcCCCCEEEeec
Confidence 111111111 233333366666655444422 233444443322 345555444332222 22222234444443
Q ss_pred cCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEE
Q psy1288 316 HHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 316 ~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~ 356 (1012)
.+ .-.|++|++++|+....|...++-|..++++|+++.|+
T Consensus 455 ~d-~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~La 494 (893)
T KOG0291|consen 455 QD-SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLA 494 (893)
T ss_pred cc-eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEE
Confidence 33 35799999999998877777778888888999998544
No 186
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.35 E-value=0.0055 Score=79.53 Aligned_cols=70 Identities=16% Similarity=0.049 Sum_probs=47.1
Q ss_pred ccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEE-EEeCCCCCCCCCcccc-chhhhhHHHHHHHH
Q psy1288 641 LKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLI-RIETKAGHGGGKPTTK-QFPLTIPVIYFYLT 718 (1012)
Q Consensus 641 ~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l-~~~p~~gHg~~~~~~~-~~~~~~~~~~fl~~ 718 (1012)
|.++++| +|+++|..|..+++..+..+...+..+ .+ .+.+++||...--... ..+.+..+.+||.+
T Consensus 293 L~~i~~P-~L~i~G~~D~ivp~~~~~~l~~~i~~a-----------~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 293 LADITCP-VLAFVGEVDDIGQPASVRGIRRAAPNA-----------EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred hhhCCCC-EEEEEeCCCCCCCHHHHHHHHHhCCCC-----------eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 3478899 999999999999998887765543322 33 4568899974211111 23455667789988
Q ss_pred hCCC
Q psy1288 719 SGPV 722 (1012)
Q Consensus 719 ~l~~ 722 (1012)
+-+.
T Consensus 361 ~~~~ 364 (994)
T PRK07868 361 LEGD 364 (994)
T ss_pred hccC
Confidence 7544
No 187
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.28 E-value=0.012 Score=56.05 Aligned_cols=93 Identities=17% Similarity=0.117 Sum_probs=50.1
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh-hcCCCcchHh-HHHHHHHHHHHcCCCC
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG-RLLNKQNVFD-DFQCAAEYLIASGYTQ 510 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~-~~~~~~~~~~-D~~a~~~~l~~~~~~d 510 (1012)
-+|++.||......++... .....|+.+|+.|+.+++.--... .... +......+.. ..+.++..|.+. .+
T Consensus 15 ~tilLaHGAGasmdSt~m~-~~a~~la~~G~~vaRfefpYma~R----rtg~rkPp~~~~t~~~~~~~~~aql~~~--l~ 87 (213)
T COG3571 15 VTILLAHGAGASMDSTSMT-AVAAALARRGWLVARFEFPYMAAR----RTGRRKPPPGSGTLNPEYIVAIAQLRAG--LA 87 (213)
T ss_pred EEEEEecCCCCCCCCHHHH-HHHHHHHhCceeEEEeecchhhhc----cccCCCCcCccccCCHHHHHHHHHHHhc--cc
Confidence 4677889876555444333 344566778999998886421100 0000 0011111122 222333333333 34
Q ss_pred CCcEEEEecChHHHHHHHHHhh
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
...+.+-|+||||-++..++..
T Consensus 88 ~gpLi~GGkSmGGR~aSmvade 109 (213)
T COG3571 88 EGPLIIGGKSMGGRVASMVADE 109 (213)
T ss_pred CCceeeccccccchHHHHHHHh
Confidence 4578999999999988777654
No 188
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.28 E-value=0.062 Score=62.66 Aligned_cols=209 Identities=15% Similarity=0.111 Sum_probs=115.6
Q ss_pred CCeeeCCEEEEEEEcCCCC------eeEEEEEeCCCCce--EEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCc
Q psy1288 110 SPQRQGDHYFFFHNTGLQN------HSVMYIQDSLDGEA--RVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSD 181 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~~~~~~------~~~l~~~~~~~g~~--~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~ 181 (1012)
.+.+||..+||.+...... ...||+.....+.. ++|+... ++.+....+..|+||++|.+.+.....
T Consensus 176 ~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~----~~~~~~~~~~~s~d~~~l~i~~~~~~~- 250 (414)
T PF02897_consen 176 SWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEP----DEPFWFVSVSRSKDGRYLFISSSSGTS- 250 (414)
T ss_dssp EECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-T----TCTTSEEEEEE-TTSSEEEEEEESSSS-
T ss_pred EEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeec----CCCcEEEEEEecCcccEEEEEEEcccc-
Confidence 4457888999999766444 67899988876543 3555422 123324467899999999988887766
Q ss_pred eEEEEEEECCCC-----ceeceeecc-eeeeeeEEeeCCCeEEEEecCCCCCcc-----cCCCC--Cce-EEEEeecccc
Q psy1288 182 WTSMHFKDVATG-----KEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSK-----KHSKK--NRS-SAYHLTVNVA 247 (1012)
Q Consensus 182 ~~~L~v~dl~tg-----~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~-----~~~~~--~~~-l~~~~~~~~~ 247 (1012)
.+.+|++|+.++ +...+.... .....+.+. |..|++.++.....+. .+... ... ++.... .
T Consensus 251 ~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~---~ 325 (414)
T PF02897_consen 251 ESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPED---E 325 (414)
T ss_dssp EEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--S---S
T ss_pred CCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCC---C
Confidence 689999999886 333333221 112333332 6678877765332221 00000 111 222110 1
Q ss_pred ceeeeeeecCCCEEEEEECCCCCCceEEEEeCC-CCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcC-ceEEEEEE
Q psy1288 248 PITSQYITNEGPQFVFKTNKDAPNYRLITIDFD-NFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHH-VKNVMHLH 325 (1012)
Q Consensus 248 ~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~l~~~ 325 (1012)
......++..+++|++..+.+. ..+|..+++. +.. ...+.......+.......+++.+++.+..- ..+.++.+
T Consensus 326 ~~~l~~~~~~~~~Lvl~~~~~~-~~~l~v~~~~~~~~---~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~ 401 (414)
T PF02897_consen 326 DVSLEDVSLFKDYLVLSYRENG-SSRLRVYDLDDGKE---SREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRY 401 (414)
T ss_dssp SEEEEEEEEETTEEEEEEEETT-EEEEEEEETT-TEE---EEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEE
T ss_pred ceeEEEEEEECCEEEEEEEECC-ccEEEEEECCCCcE---EeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEE
Confidence 1222235667889988887654 5688999987 322 1222222222222222223446777766654 34689999
Q ss_pred ecCCCce
Q psy1288 326 DLASGKH 332 (1012)
Q Consensus 326 dl~~G~~ 332 (1012)
|+.+|+.
T Consensus 402 d~~t~~~ 408 (414)
T PF02897_consen 402 DLATGEL 408 (414)
T ss_dssp ETTTTCE
T ss_pred ECCCCCE
Confidence 9988764
No 189
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=97.27 E-value=0.0001 Score=77.17 Aligned_cols=56 Identities=29% Similarity=0.317 Sum_probs=46.0
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 797 GYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 797 ~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
..||+...+ -+-.+|++|++|++|.-+ .++..|+++||+.|+ +++++++++.+|+|
T Consensus 154 ~~sp~~~~~------~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv-------~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 154 LASPLNASD------LKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGV-------DVELHVYPGMPHGF 209 (211)
T ss_dssp TTSGGGSSC------CTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT--------EEEEEEETTEETTG
T ss_pred ccccccccc------cccCCCeeeeccccccch--HHHHHHHHHHHHCCC-------CEEEEEECCCeEEe
Confidence 457776611 144789999999999876 589999999999999 99999999999987
No 190
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.24 E-value=0.043 Score=58.82 Aligned_cols=195 Identities=15% Similarity=0.129 Sum_probs=105.7
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-eecceeeeeeEEeeCCCeEEEEecCCCCCcc-cCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-VLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK-KHSKK 234 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~-~~~~~ 234 (1012)
..+..+.|+|||++|+.... + ..|+++++.+++.... .........+.|+|+++.|+....++...-. .....
T Consensus 10 ~~i~~~~~~~~~~~l~~~~~-~----g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~ 84 (289)
T cd00200 10 GGVTCVAFSPDGKLLATGSG-D----GTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE 84 (289)
T ss_pred CCEEEEEEcCCCCEEEEeec-C----cEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc
Confidence 46788999999999987654 2 2788889887764332 2222334578999999877776543210000 00000
Q ss_pred CceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEE
Q psy1288 235 NRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSY 314 (1012)
Q Consensus 235 ~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 314 (1012)
....+ ......+....|+++++ +++... ....+...++.+.. ....+..... .+..+.+...+.+++..
T Consensus 85 ~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~---~~~~i~~~~~~~~~---~~~~~~~~~~-~i~~~~~~~~~~~l~~~ 153 (289)
T cd00200 85 CVRTL---TGHTSYVSSVAFSPDGR-ILSSSS---RDKTIKVWDVETGK---CLTTLRGHTD-WVNSVAFSPDGTFVASS 153 (289)
T ss_pred ceEEE---eccCCcEEEEEEcCCCC-EEEEec---CCCeEEEEECCCcE---EEEEeccCCC-cEEEEEEcCcCCEEEEE
Confidence 00000 00001233345777754 444443 23467777776433 1122221212 23333333323444433
Q ss_pred EcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 315 IHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 315 ~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..+ ..+.+|++.+++....+......+..+.++++++.+++... ...+..+|+
T Consensus 154 ~~~--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~i~i~d~ 206 (289)
T cd00200 154 SQD--GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS----DGTIKLWDL 206 (289)
T ss_pred cCC--CcEEEEEccccccceeEecCccccceEEECCCcCEEEEecC----CCcEEEEEC
Confidence 323 46788888666655555544445667888999888777654 346888888
No 191
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.23 E-value=0.0019 Score=73.98 Aligned_cols=112 Identities=5% Similarity=-0.083 Sum_probs=71.8
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHH-HHHhC-CeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIV-FLRDF-NGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASG 507 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~-~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~ 507 (1012)
...|++|++||.........|...... ++... .+.|+++|.+|.+..... .... .......++...+++|.+..
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~--~a~~--~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYP--TSAA--YTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCc--cccc--cHHHHHHHHHHHHHHHHHhh
Confidence 446899999996543222234443332 33222 599999999987642111 1000 00111234555667776543
Q ss_pred CCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 508 YTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 508 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
..+.+++.++|||+||.+++.++.+.|.++..++...|
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDP 152 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDP 152 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcC
Confidence 45788999999999999999999888988888887766
No 192
>KOG2314|consensus
Probab=97.23 E-value=0.029 Score=63.30 Aligned_cols=200 Identities=10% Similarity=0.057 Sum_probs=118.0
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-eecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-VLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
.+.++.|||-+..|||-.....+--.++-++.+-+++.++. .+.+...-..-|-..|++|++-.++....+....-.+-
T Consensus 348 gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~ 427 (698)
T KOG2314|consen 348 GIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNL 427 (698)
T ss_pred cccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeE
Confidence 47789999999999999887766556778888877776542 23334445688999999999987664322110001122
Q ss_pred eEEEEeeccc--------cceeeeeeecCCCEEEEEECCC-CCCceEEEEeCCCCcccCcEEeeccCCCcee-eeeEEec
Q psy1288 237 SSAYHLTVNV--------APITSQYITNEGPQFVFKTNKD-APNYRLITIDFDNFAESNWKTLIEENKDDVL-DWATCVA 306 (1012)
Q Consensus 237 ~l~~~~~~~~--------~~i~~~~~s~dg~~l~~~tn~~-~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~-~~~~~~~ 306 (1012)
.++.....+. ..+-...|.|.|+++.+++... ..+...|.+...... |+ |+..-+.... .-+..+.
T Consensus 428 eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~---~~-lVk~~dk~~~N~vfwsPk 503 (698)
T KOG2314|consen 428 EIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK---PS-LVKELDKKFANTVFWSPK 503 (698)
T ss_pred EEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc---hh-hhhhhcccccceEEEcCC
Confidence 2322221111 1122346999999999987543 346677777643322 22 2222222222 2233456
Q ss_pred CCEEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEEEEecCC
Q psy1288 307 NDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIFYSFMSF 362 (1012)
Q Consensus 307 ~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss~ 362 (1012)
|+.+++.......+.|..+|.+-.. ...+..+ ....+...|+|.|..+.-..++.
T Consensus 504 G~fvvva~l~s~~g~l~F~D~~~a~-~k~~~~~eh~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 504 GRFVVVAALVSRRGDLEFYDTDYAD-LKDTASPEHFAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred CcEEEEEEecccccceEEEecchhh-hhhccCccccccccceECCCCCEEEEeeehh
Confidence 6778877777667788888874222 2233333 23344667899887655444443
No 193
>KOG0318|consensus
Probab=97.21 E-value=0.062 Score=60.49 Aligned_cols=93 Identities=13% Similarity=0.212 Sum_probs=57.9
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEeCCCCc-eEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQDSLDGE-ARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA 191 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~~~~g~-~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~ 191 (1012)
|.|+.+.|.- ...++.++..... ..+.+. +...+.-.++||.|-|||= |+..-.++|||..
T Consensus 28 pkgd~ilY~n------Gksv~ir~i~~~~~~~iYtE-------H~~~vtVAkySPsG~yiAS-----GD~sG~vRIWdtt 89 (603)
T KOG0318|consen 28 PKGDNILYTN------GKSVIIRNIDNPASVDIYTE-------HAHQVTVAKYSPSGFYIAS-----GDVSGKVRIWDTT 89 (603)
T ss_pred CCCCeEEEeC------CCEEEEEECCCccceeeecc-------ccceeEEEEeCCCceEEee-----cCCcCcEEEEecc
Confidence 6677777741 2345666654432 222222 3456778899999998872 3333478999976
Q ss_pred CCce-ecee--ecceeeeeeEEeeCCCeEEEEecC
Q psy1288 192 TGKE-YPEV--LHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 192 tg~~-~~~t--~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+. +.-+ .-.+....++|+.||++|+-+.+.
T Consensus 90 ~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEG 124 (603)
T KOG0318|consen 90 QKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEG 124 (603)
T ss_pred CcceeeeeeeeecccccccceeCCCCcEEEEEecC
Confidence 5442 2211 122345789999999999988743
No 194
>KOG4497|consensus
Probab=97.20 E-value=0.001 Score=70.01 Aligned_cols=194 Identities=15% Similarity=0.107 Sum_probs=101.7
Q ss_pred eEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe-cCCCCCcccCCCCCceEE
Q psy1288 161 SYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN-QEPKSKSKKHSKKNRSSA 239 (1012)
Q Consensus 161 ~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~-~~~~~~g~~~~~~~~~l~ 239 (1012)
...+||+|++||-..+ ++|.|.|.+|=+..++-.--.....+.|+.|.-.|+-.. .++...-. + -.+.-+
T Consensus 13 ~c~fSp~g~yiAs~~~------yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvw-s--l~Qpew 83 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSR------YRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVW-S--LVQPEW 83 (447)
T ss_pred ceeECCCCCeeeeeee------eEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEE-E--eeccee
Confidence 4689999999997653 589999988766655322222346789999998776553 22110000 0 000001
Q ss_pred EEe-eccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEE-ecCCEEEEEEEcC
Q psy1288 240 YHL-TVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATC-VANDKLILSYIHH 317 (1012)
Q Consensus 240 ~~~-~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 317 (1012)
+-. ..+..++.+..|||||++|+..+.- ..+|-...+.+.+ -.+++.....+ ..+.. .+++...+..+.|
T Consensus 84 ~ckIdeg~agls~~~WSPdgrhiL~tseF---~lriTVWSL~t~~----~~~~~~pK~~~-kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 84 YCKIDEGQAGLSSISWSPDGRHILLTSEF---DLRITVWSLNTQK----GYLLPHPKTNV-KGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred EEEeccCCCcceeeeECCCcceEeeeecc---eeEEEEEEeccce----eEEecccccCc-eeEEECCCCceeeeeeccc
Confidence 111 1122567777899999999988753 2445555555433 23343332222 33333 2334455555544
Q ss_pred ceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 318 VKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 318 g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
-..-+.+..-.+-...+.+..+.-+..++.|+|||+.+++--+-.. ..+|.|.-
T Consensus 156 Ckdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Le--ykv~aYe~ 209 (447)
T KOG4497|consen 156 CKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLE--YKVYAYER 209 (447)
T ss_pred HHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhh--heeeeeee
Confidence 3321111111011112233344445567889999998886543221 23555544
No 195
>KOG1553|consensus
Probab=97.17 E-value=0.0019 Score=68.55 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=87.4
Q ss_pred EEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhh
Q psy1288 404 KQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDG 483 (1012)
Q Consensus 404 ~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 483 (1012)
++.++.+.||.+|....+...........-+|+...|..+. |......--.+.||.|+-.|..|-++...
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGF-----YEvG~m~tP~~lgYsvLGwNhPGFagSTG----- 284 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGF-----YEVGVMNTPAQLGYSVLGWNHPGFAGSTG----- 284 (517)
T ss_pred eEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccc-----eEeeeecChHHhCceeeccCCCCccccCC-----
Confidence 56678888999998766654433333344577777774321 11111111123699999999998654321
Q ss_pred hhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 484 GRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 484 ~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
....+++..-..+++++.+..--..++.|.++|+|-||+.+.+++..+|+. +++|..+.
T Consensus 285 --~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAt 343 (517)
T KOG1553|consen 285 --LPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDAT 343 (517)
T ss_pred --CCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecc
Confidence 123344555566778888877556788999999999999999999999985 88888776
No 196
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=97.13 E-value=0.24 Score=55.69 Aligned_cols=244 Identities=9% Similarity=0.009 Sum_probs=107.3
Q ss_pred CCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE
Q psy1288 110 SPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD 189 (1012)
Q Consensus 110 ~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d 189 (1012)
..+|+|+++|-..... ..-..|..+ ..+..+.+ . .....+ ....+.++|||++|.-+. ..+ ..|.+++
T Consensus 41 ~~spd~~~lyv~~~~~--~~i~~~~~~-~~g~l~~~-~--~~~~~~--~p~~i~~~~~g~~l~v~~-~~~---~~v~v~~ 108 (330)
T PRK11028 41 VISPDKRHLYVGVRPE--FRVLSYRIA-DDGALTFA-A--ESPLPG--SPTHISTDHQGRFLFSAS-YNA---NCVSVSP 108 (330)
T ss_pred EECCCCCEEEEEECCC--CcEEEEEEC-CCCceEEe-e--eecCCC--CceEEEECCCCCEEEEEE-cCC---CeEEEEE
Confidence 3458888776643321 223345554 23332222 1 111111 235788999999886543 322 2677888
Q ss_pred CCC-Cceec--eeecc-eeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEE------EEeeccccceeeeeeecCCC
Q psy1288 190 VAT-GKEYP--EVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSA------YHLTVNVAPITSQYITNEGP 259 (1012)
Q Consensus 190 l~t-g~~~~--~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~------~~~~~~~~~i~~~~~s~dg~ 259 (1012)
++. |.... ..... .......++|||+.|+.........-..+......+. .....+ .+.....++|||+
T Consensus 109 ~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g-~~p~~~~~~pdg~ 187 (330)
T PRK11028 109 LDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEG-AGPRHMVFHPNQQ 187 (330)
T ss_pred ECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCC-CCCceEEECCCCC
Confidence 763 32211 11111 1224568999998876654321100000000000000 000000 1112335899999
Q ss_pred EEEEEECCCCCCceEEEEeCC--CCcccCcEEe--eccC---CCceeeeeEEecCCEEEEEEEcCceEEEEEEecCC-Cc
Q psy1288 260 QFVFKTNKDAPNYRLITIDFD--NFAESNWKTL--IEEN---KDDVLDWATCVANDKLILSYIHHVKNVMHLHDLAS-GK 331 (1012)
Q Consensus 260 ~l~~~tn~~~~~~~L~~~dl~--~~~~~~~~~l--~~~~---~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~-G~ 331 (1012)
.+|+.... ...|..++++ +++......+ ++.. +..........+++.+++... +...|.+++++. +.
T Consensus 188 ~lyv~~~~---~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~--~~~~I~v~~i~~~~~ 262 (330)
T PRK11028 188 YAYCVNEL---NSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDR--TASLISVFSVSEDGS 262 (330)
T ss_pred EEEEEecC---CCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecC--CCCeEEEEEEeCCCC
Confidence 88887532 2345555543 2221111111 1111 111111222345566776532 234566666632 22
Q ss_pred ee---eeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 332 HL---YTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 332 ~~---~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.. ..+... .....+.++|||+.|+.+... ..--.+|.+|.
T Consensus 263 ~~~~~~~~~~~-~~p~~~~~~~dg~~l~va~~~-~~~v~v~~~~~ 305 (330)
T PRK11028 263 VLSFEGHQPTE-TQPRGFNIDHSGKYLIAAGQK-SHHISVYEIDG 305 (330)
T ss_pred eEEEeEEEecc-ccCCceEECCCCCEEEEEEcc-CCcEEEEEEcC
Confidence 11 111111 112356788999988876432 22234555554
No 197
>PTZ00420 coronin; Provisional
Probab=97.10 E-value=0.42 Score=57.21 Aligned_cols=200 Identities=13% Similarity=0.040 Sum_probs=97.4
Q ss_pred ceEeeeEEECCC-CcEEEEEEeCCCCceEEEEEEECCCCcee---------ceeecceeeeeeEEeeCCCeEEEEec-CC
Q psy1288 156 TVSLGSYSFSED-GKTLAYCLSSSGSDWTSMHFKDVATGKEY---------PEVLHRLKFVSIAWTHDHKGVFYSNQ-EP 224 (1012)
Q Consensus 156 ~~~i~~~~~SPD-Gk~iAy~~~~~G~~~~~L~v~dl~tg~~~---------~~t~~~~~~~~~~WSpDG~~l~y~~~-~~ 224 (1012)
...+..++|||+ ++.|| +.+.+| .|.+||+.++... .+.........++|+|++..++.+.. +.
T Consensus 74 ~~~V~~lafsP~~~~lLA-SgS~Dg----tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg 148 (568)
T PTZ00420 74 TSSILDLQFNPCFSEILA-SGSEDL----TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS 148 (568)
T ss_pred CCCEEEEEEcCCCCCEEE-EEeCCC----eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence 346889999998 55554 444433 7899998754311 01112234578999999988766543 21
Q ss_pred CCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEE
Q psy1288 225 KSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATC 304 (1012)
Q Consensus 225 ~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~ 304 (1012)
...-. +..... ..+... ....+....|+++|..|+..+. ...|..+|+.++.. ...+..+........+..
T Consensus 149 tIrIW-Dl~tg~-~~~~i~-~~~~V~SlswspdG~lLat~s~----D~~IrIwD~Rsg~~--i~tl~gH~g~~~s~~v~~ 219 (568)
T PTZ00420 149 FVNIW-DIENEK-RAFQIN-MPKKLSSLKWNIKGNLLSGTCV----GKHMHIIDPRKQEI--ASSFHIHDGGKNTKNIWI 219 (568)
T ss_pred eEEEE-ECCCCc-EEEEEe-cCCcEEEEEECCCCCEEEEEec----CCEEEEEECCCCcE--EEEEecccCCceeEEEEe
Confidence 10000 000000 111100 0123444469999997765542 24577778876541 222322221111111111
Q ss_pred ----ecCCEEEEEEEcC-ceEEEEEEecCC-CceeeeecCC--ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 305 ----VANDKLILSYIHH-VKNVMHLHDLAS-GKHLYTFPLD--VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 305 ----~~~~~l~~~~~~~-g~~~l~~~dl~~-G~~~~~l~~~--~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.+++.++....++ ...++.+||+.+ ++....+... .+.+. +.++++.+.++++..+. ..++.+++
T Consensus 220 ~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~-p~~D~~tg~l~lsGkGD---~tIr~~e~ 292 (568)
T PTZ00420 220 DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLI-PHYDESTGLIYLIGKGD---GNCRYYQH 292 (568)
T ss_pred eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceE-EeeeCCCCCEEEEEECC---CeEEEEEc
Confidence 2434444433332 235799999863 3333333322 22222 23445545555554332 34666666
No 198
>COG0400 Predicted esterase [General function prediction only]
Probab=97.10 E-value=0.0018 Score=66.76 Aligned_cols=50 Identities=18% Similarity=0.080 Sum_probs=45.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
...+|+|++||++|+.||+.++.++.+.|++.|. .|++..++ -||.+...
T Consensus 144 ~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~-------~v~~~~~~-~GH~i~~e 193 (207)
T COG0400 144 LAGTPILLSHGTEDPVVPLALAEALAEYLTASGA-------DVEVRWHE-GGHEIPPE 193 (207)
T ss_pred cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC-------CEEEEEec-CCCcCCHH
Confidence 3449999999999999999999999999999988 99999998 89998753
No 199
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.10 E-value=0.0038 Score=66.39 Aligned_cols=51 Identities=25% Similarity=0.223 Sum_probs=48.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
+++.|+|+..|++|+.+|..+-..+-++|...++ .+.+.+|++..|||..+
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~-------~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGV-------KVDLEIYPGAGHGFAND 206 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHHHHHHhcCC-------CeeEEEeCCCccccccC
Confidence 7779999999999999999999999999999987 88999999999999876
No 200
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.09 E-value=0.019 Score=64.07 Aligned_cols=115 Identities=14% Similarity=0.197 Sum_probs=69.4
Q ss_pred EEEEE-eCCCCCCCCCcEEEEEcCCC-CCCCCCCc---ChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcch
Q psy1288 418 MFILS-RKGAQLDGNNPCILYGYGGF-AVSLQPGF---SVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNV 492 (1012)
Q Consensus 418 ~~l~~-p~~~~~~~~~P~vv~~hGg~-~~~~~~~~---~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~ 492 (1012)
.|++. |.... .+..|+|+|+|||. .....+.. ...+...+. ...+++.||.....- .........
T Consensus 108 ~Wlvk~P~~~~-pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~-------~~~~~yPtQ 177 (374)
T PF10340_consen 108 YWLVKAPNRFK-PKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSD-------EHGHKYPTQ 177 (374)
T ss_pred EEEEeCCcccC-CCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccc-------cCCCcCchH
Confidence 56665 55433 23469999999983 22222221 112233343 458888888654300 011222344
Q ss_pred HhHHHHHHHHHH-HcCCCCCCcEEEEecChHHHHHHHHHhhC----C-CceeEEEEccC
Q psy1288 493 FDDFQCAAEYLI-ASGYTQSSRLAIQGGSNGGLLTAACINQR----P-DLFGAAIVQVG 545 (1012)
Q Consensus 493 ~~D~~a~~~~l~-~~~~~d~~~i~i~G~S~GG~l~~~~~~~~----p-~~f~a~v~~~~ 545 (1012)
..+.++..++|+ ..+ .+.|.++|.|+||.+++..+... + ..-+.+|+.+|
T Consensus 178 L~qlv~~Y~~Lv~~~G---~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISP 233 (374)
T PF10340_consen 178 LRQLVATYDYLVESEG---NKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISP 233 (374)
T ss_pred HHHHHHHHHHHHhccC---CCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECC
Confidence 568888889999 444 36899999999999998775432 1 12367888888
No 201
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.08 E-value=0.3 Score=52.98 Aligned_cols=101 Identities=17% Similarity=0.141 Sum_probs=67.2
Q ss_pred ee-eCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 112 QR-QGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 112 ~~-dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
.| ++.-++|-|+.+ .-+++.+..+++..+.+.+ +.+....+...|||||++|.-+.+.-...+-.|-|+|+
T Consensus 13 ~p~~~~avafaRRPG----~~~~v~D~~~g~~~~~~~a----~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 13 HPTRPEAVAFARRPG----TFALVFDCRTGQLLQRLWA----PPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred CCCCCeEEEEEeCCC----cEEEEEEcCCCceeeEEcC----CCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEEC
Confidence 35 445677777665 3355556666665554442 23556778899999999998777765555568999999
Q ss_pred CCCceeceee--cceeeeeeEEeeCCCeEEEE
Q psy1288 191 ATGKEYPEVL--HRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 191 ~tg~~~~~t~--~~~~~~~~~WSpDG~~l~y~ 220 (1012)
+.+-.+...+ .+.+-..+.|.|||+.|+..
T Consensus 85 ~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 85 ARGYRRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred cCCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 8444333232 23344678999999988765
No 202
>KOG2139|consensus
Probab=97.07 E-value=0.0095 Score=63.80 Aligned_cols=115 Identities=22% Similarity=0.308 Sum_probs=72.0
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceecee-ecceeeeeeEEeeCCCeEEEEecCCCCCcccCCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEV-LHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK 233 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t-~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~ 233 (1012)
|+..+.+.+|-+||..++=. +. | ...|.++|+++|.-.++. ....+++-..|||||..|+-.+-+..-.-. +
T Consensus 194 gh~pVtsmqwn~dgt~l~tA-S~-g--sssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw---~ 266 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTA-SF-G--SSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLW---Q 266 (445)
T ss_pred CCceeeEEEEcCCCCEEeec-cc-C--cceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeee---h
Confidence 45678899999999887643 33 2 247889999998876655 444556789999999988777644210000 0
Q ss_pred CCceEEEEee--ccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCC
Q psy1288 234 KNRSSAYHLT--VNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFD 280 (1012)
Q Consensus 234 ~~~~l~~~~~--~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~ 280 (1012)
+++. +..+. .....+....|+|+|..|+|..... ..||.+...
T Consensus 267 e~q~-wt~erw~lgsgrvqtacWspcGsfLLf~~sgs---p~lysl~f~ 311 (445)
T KOG2139|consen 267 ENQS-WTKERWILGSGRVQTACWSPCGSFLLFACSGS---PRLYSLTFD 311 (445)
T ss_pred hccc-ceecceeccCCceeeeeecCCCCEEEEEEcCC---ceEEEEeec
Confidence 0000 00000 0112344557999999999988643 457776654
No 203
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.06 E-value=0.2 Score=53.50 Aligned_cols=228 Identities=17% Similarity=0.102 Sum_probs=114.7
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCce-EEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEA-RVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~-~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
.++|++++....+ +.-.+|-... +.. ..+.. ....+..+.|+|++++|+.... + ..|+++|+
T Consensus 18 ~~~~~~l~~~~~~---g~i~i~~~~~--~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~-~----~~i~i~~~ 80 (289)
T cd00200 18 SPDGKLLATGSGD---GTIKVWDLET--GELLRTLKG-------HTGPVRDVAASADGTYLASGSS-D----KTIRLWDL 80 (289)
T ss_pred cCCCCEEEEeecC---cEEEEEEeeC--CCcEEEEec-------CCcceeEEEECCCCCEEEEEcC-C----CeEEEEEc
Confidence 3677877765532 3455564432 222 22211 2234568999999988877654 2 27999999
Q ss_pred CCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCC
Q psy1288 191 ATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDA 269 (1012)
Q Consensus 191 ~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~ 269 (1012)
.+++... ..........+.|+|+++.|+....+....- -+.. ..+...........+....+++++..++...
T Consensus 81 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~-~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---- 154 (289)
T cd00200 81 ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKV-WDVE-TGKCLTTLRGHTDWVNSVAFSPDGTFVASSS---- 154 (289)
T ss_pred CcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEE-EECC-CcEEEEEeccCCCcEEEEEEcCcCCEEEEEc----
Confidence 8865433 2222224577899999764444332211000 0000 0000000000012233445777766555443
Q ss_pred CCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEe-cCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecc
Q psy1288 270 PNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCV-ANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSG 348 (1012)
Q Consensus 270 ~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~ 348 (1012)
.+..+..+|+..... ...+ ... ...+..+.+. +++.+++... ...+.+|++..++....+......+..+.+
T Consensus 155 ~~~~i~i~d~~~~~~--~~~~-~~~-~~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 227 (289)
T cd00200 155 QDGTIKLWDLRTGKC--VATL-TGH-TGEVNSVAFSPDGEKLLSSSS---DGTIKLWDLSTGKCLGTLRGHENGVNSVAF 227 (289)
T ss_pred CCCcEEEEEcccccc--ceeE-ecC-ccccceEEECCCcCEEEEecC---CCcEEEEECCCCceecchhhcCCceEEEEE
Confidence 134566777754431 1222 221 1122333333 3235555443 356888898666654444333345667788
Q ss_pred cccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 349 KKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 349 spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
++++. +++..+ ....++.+|+
T Consensus 228 ~~~~~-~~~~~~---~~~~i~i~~~ 248 (289)
T cd00200 228 SPDGY-LLASGS---EDGTIRVWDL 248 (289)
T ss_pred cCCCc-EEEEEc---CCCcEEEEEc
Confidence 88844 444443 2346888887
No 204
>KOG0266|consensus
Probab=97.04 E-value=0.068 Score=63.03 Aligned_cols=224 Identities=14% Similarity=0.094 Sum_probs=114.6
Q ss_pred CeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 111 PQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 111 p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
.+|+|.++. ....+.+-.||.........++|-. +...+....|+|+|+.|+ +.+.++ .++++|+
T Consensus 211 fs~d~~~l~---s~s~D~tiriwd~~~~~~~~~~l~g-------H~~~v~~~~f~p~g~~i~-Sgs~D~----tvriWd~ 275 (456)
T KOG0266|consen 211 FSPDGSYLL---SGSDDKTLRIWDLKDDGRNLKTLKG-------HSTYVTSVAFSPDGNLLV-SGSDDG----TVRIWDV 275 (456)
T ss_pred ECCCCcEEE---EecCCceEEEeeccCCCeEEEEecC-------CCCceEEEEecCCCCEEE-EecCCC----cEEEEec
Confidence 458888333 2233345666655221222333322 455678999999995555 443333 8999999
Q ss_pred CCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc--c-ceeeeeeecCCCEEEEEEC
Q psy1288 191 ATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV--A-PITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 191 ~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~--~-~i~~~~~s~dg~~l~~~tn 266 (1012)
.+|+... +.......+..++++||+.|+-.+.+....-. +.......+....... . .+....++|+|+.|+..+.
T Consensus 276 ~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vw-d~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~ 354 (456)
T KOG0266|consen 276 RTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVW-DLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASL 354 (456)
T ss_pred cCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEE-ECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecC
Confidence 9988754 33334456788999999877665433211000 0000010000110000 1 2345568899998888763
Q ss_pred CCCCCceEEEEeCCCCcccCcEEeeccCCC--ceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEE
Q psy1288 267 KDAPNYRLITIDFDNFAESNWKTLIEENKD--DVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTI 343 (1012)
Q Consensus 267 ~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v 343 (1012)
+..+...++..+.. ......+... -.........+..++.. ..+ .-+++|++.++.....+... ...+
T Consensus 355 ----d~~~~~w~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~sg-~~d--~~v~~~~~~s~~~~~~l~~h~~~~~ 425 (456)
T KOG0266|consen 355 ----DRTLKLWDLRSGKS--VGTYTGHSNLVRCIFSPTLSTGGKLIYSG-SED--GSVYVWDSSSGGILQRLEGHSKAAV 425 (456)
T ss_pred ----CCeEEEEEccCCcc--eeeecccCCcceeEecccccCCCCeEEEE-eCC--ceEEEEeCCccchhhhhcCCCCCce
Confidence 33455556654431 1222222211 11111122232333333 332 45778888766655555444 4445
Q ss_pred EeecccccCcEEEEEe
Q psy1288 344 VGFSGKKKYSEIFYSF 359 (1012)
Q Consensus 344 ~~~~~spdg~~l~~~~ 359 (1012)
...++++....++...
T Consensus 426 ~~~~~~~~~~~~~s~s 441 (456)
T KOG0266|consen 426 SDLSSHPTENLIASSS 441 (456)
T ss_pred eccccCCCcCeeeecC
Confidence 5667777666555443
No 205
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.02 E-value=0.025 Score=64.35 Aligned_cols=57 Identities=14% Similarity=0.317 Sum_probs=42.4
Q ss_pred cccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCC
Q psy1288 640 ELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 697 (1012)
Q Consensus 640 ~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg 697 (1012)
+|.++++| |+++.|..|..+|+.|++.|...+......-...+..+++.+.+.-||-
T Consensus 292 DLr~Ir~P-iivfas~gDnITPP~QaL~WI~dlY~~~~ei~a~gQ~IVY~~h~~vGHL 348 (581)
T PF11339_consen 292 DLRNIRSP-IIVFASYGDNITPPQQALNWIPDLYPDTEEIKAAGQTIVYLLHESVGHL 348 (581)
T ss_pred ehhhCCCC-EEEEeccCCCCCChhHhccchHhhcCCHHHHHhCCCEEEEEecCCCCce
Confidence 45689999 9999999999999999988775443221111122777889999999995
No 206
>KOG0291|consensus
Probab=97.01 E-value=0.067 Score=62.72 Aligned_cols=196 Identities=12% Similarity=0.139 Sum_probs=107.8
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcc-cCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK-KHS 232 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~-~~~ 232 (1012)
+..++...+.||||++||-..+ ...+.|||..+|.-.. .+-+....+.+.|+.+|+.++-.+.++..+.. ...
T Consensus 349 H~~~i~~l~YSpDgq~iaTG~e-----DgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 349 HSDRITSLAYSPDGQLIATGAE-----DGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred cccceeeEEECCCCcEEEeccC-----CCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecc
Confidence 3567889999999999996544 3378999998886432 22333456889999999988777665421111 000
Q ss_pred CCCceEEEEeeccccceeee--eeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEE
Q psy1288 233 KKNRSSAYHLTVNVAPITSQ--YITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKL 310 (1012)
Q Consensus 233 ~~~~~l~~~~~~~~~~i~~~--~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 310 (1012)
..+-+. | ..-.+++.. .+.|.|. |.+.... ..|.|+..++.++. ..+++...+..+..-.....++.|
T Consensus 424 YrNfRT-f---t~P~p~QfscvavD~sGe-lV~AG~~--d~F~IfvWS~qTGq---llDiLsGHEgPVs~l~f~~~~~~L 493 (893)
T KOG0291|consen 424 YRNFRT-F---TSPEPIQFSCVAVDPSGE-LVCAGAQ--DSFEIFVWSVQTGQ---LLDILSGHEGPVSGLSFSPDGSLL 493 (893)
T ss_pred cceeee-e---cCCCceeeeEEEEcCCCC-EEEeecc--ceEEEEEEEeecCe---eeehhcCCCCcceeeEEccccCeE
Confidence 000000 0 000222222 2344454 3333322 46899999998876 355555554444432223333444
Q ss_pred EEEEEcCceEEEEEEecCC-CceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 311 ILSYIHHVKNVMHLHDLAS-GKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 311 ~~~~~~~g~~~l~~~dl~~-G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+-.+-+ ..+.+|++=+ ....+.+... ..+..++++|||++|++..-. .+|-.+|.
T Consensus 494 aS~SWD---kTVRiW~if~s~~~vEtl~i~-sdvl~vsfrPdG~elaVaTld----gqItf~d~ 549 (893)
T KOG0291|consen 494 ASGSWD---KTVRIWDIFSSSGTVETLEIR-SDVLAVSFRPDGKELAVATLD----GQITFFDI 549 (893)
T ss_pred Eecccc---ceEEEEEeeccCceeeeEeec-cceeEEEEcCCCCeEEEEEec----ceEEEEEh
Confidence 332222 2355566521 1223334332 345578899999999987644 23444554
No 207
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=97.00 E-value=0.00025 Score=77.53 Aligned_cols=155 Identities=14% Similarity=0.089 Sum_probs=88.6
Q ss_pred CCcEEEEEeCCCCCCCCCcc----ccchhhhhHHHHHHHHhCCCCCCCCCCCCCc--cCCccccccCccceeeecccccc
Q psy1288 683 TNPLLIRIETKAGHGGGKPT----TKQFPLTIPVIYFYLTSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTDQK 756 (1012)
Q Consensus 683 ~~~~~l~~~p~~gHg~~~~~----~~~~~~~~~~~~fl~~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t~~ 756 (1012)
.+++++....+|..+....+ ....++..++++|+.++ .- . .-+++ |.||+ ++.++.+...+
T Consensus 56 ~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-pw----s-~G~VGm~G~SY~-------G~~q~~~A~~~ 122 (272)
T PF02129_consen 56 RGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-PW----S-NGKVGMYGISYG-------GFTQWAAAARR 122 (272)
T ss_dssp TT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-TT----E-EEEEEEEEETHH-------HHHHHHHHTTT
T ss_pred CCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-CC----C-CCeEEeeccCHH-------HHHHHHHHhcC
Confidence 78999999988765433222 22467888899999886 22 1 22444 88998 55555554545
Q ss_pred ccchhh-----hcccccC-CCCCC------CCCCCc---c------cCCCCC----------------------------
Q psy1288 757 DDILIA-----EVLDMLK-FNKFT------IGYFWE---S------DYGSPA---------------------------- 787 (1012)
Q Consensus 757 ~~~~~~-----~~~~~~~-~~~~~------~~~~~~---~------~~g~~~---------------------------- 787 (1012)
|..++| +..|+.. ..... ....|. . ......
T Consensus 123 ~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (272)
T PF02129_consen 123 PPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYW 202 (272)
T ss_dssp -TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHH
T ss_pred CCCceEEEecccCCcccccchhcCCcccccchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHH
Confidence 555544 4555544 11100 001220 0 000000
Q ss_pred -----ChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHh-cCCCCCCCCEEEEEeC
Q psy1288 788 -----NSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKL-RDYPHQTNPLLIRIET 861 (1012)
Q Consensus 788 -----~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 861 (1012)
.+..-+++.+.++..+++ ++..|+|+++|-.|.-.. .++.+.|++|+..+ . +..|++-|
T Consensus 203 ~~~~~~~~~~~~w~~~~~~~~~~-------~i~vP~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~-------~~~Liigp 267 (272)
T PF02129_consen 203 DEWLDHPPYDPFWQERSPSERLD-------KIDVPVLIVGGWYDTLFL-RGALRAYEALRAPGSK-------PQRLIIGP 267 (272)
T ss_dssp HHHHHT-SSSHHHHTTBHHHHHG-------G--SEEEEEEETTCSSTS-HHHHHHHHHHCTTSTC--------EEEEEES
T ss_pred HHHHhCCCcCHHHHhCChHHHHh-------hCCCCEEEecccCCcccc-hHHHHHHHHhhcCCCC-------CCEEEEeC
Confidence 001123445566665556 888999999999997666 89999999999987 5 78999887
Q ss_pred CCCCC
Q psy1288 862 KAGHG 866 (1012)
Q Consensus 862 ~~gH~ 866 (1012)
.. |+
T Consensus 268 w~-H~ 271 (272)
T PF02129_consen 268 WT-HG 271 (272)
T ss_dssp ES-TT
T ss_pred CC-CC
Confidence 64 75
No 208
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.98 E-value=0.027 Score=55.16 Aligned_cols=121 Identities=17% Similarity=0.207 Sum_probs=78.8
Q ss_pred CCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCcceeeeeccccccc
Q psy1288 487 LNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKN 566 (1012)
Q Consensus 487 ~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~~~~~~~~~~~ 566 (1012)
.+-...++|.++.+...+... ++.+.+.+||.|+..++..+.+....+++++..+|
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAp--------------------- 92 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAP--------------------- 92 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecC---------------------
Confidence 344556778877776555432 45588999999999999888775556777777777
Q ss_pred CcccccccCCCCcccccCCCCcchhhhhhhhhhhccccccccccccccCCCCChHHHHHHHcCCcccCCCCCCcccCCCC
Q psy1288 567 NMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPDELKGKQY 646 (1012)
Q Consensus 567 ~~~~~~dl~~~~~~~~~~~~plt~~~~~~~d~~~~~~~~~g~~~~~~~g~p~~~~~~~~~~~~sP~~~~~~p~~~~~~~~ 646 (1012)
+ |+ ..+. ........++|+...+ ...
T Consensus 93 ----p-d~----------------------------------------~~~~--~~~~~~~tf~~~p~~~-------lpf 118 (181)
T COG3545 93 ----P-DV----------------------------------------SRPE--IRPKHLMTFDPIPREP-------LPF 118 (181)
T ss_pred ----C-Cc----------------------------------------cccc--cchhhccccCCCcccc-------CCC
Confidence 0 00 0000 0001123344444433 456
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCC
Q psy1288 647 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 698 (1012)
Q Consensus 647 P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~ 698 (1012)
| .++++..+|+.|+++++..+..+.-++ ++.-..+||--
T Consensus 119 p-s~vvaSrnDp~~~~~~a~~~a~~wgs~------------lv~~g~~GHiN 157 (181)
T COG3545 119 P-SVVVASRNDPYVSYEHAEDLANAWGSA------------LVDVGEGGHIN 157 (181)
T ss_pred c-eeEEEecCCCCCCHHHHHHHHHhccHh------------heecccccccc
Confidence 6 999999999999999998888777665 55556677754
No 209
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.96 E-value=0.2 Score=57.08 Aligned_cols=249 Identities=10% Similarity=0.027 Sum_probs=109.1
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCC-CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDD-GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~-g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
++||+++|-.-... ..+...+..+.+....+....+..+ ...++.+..-||++...++.+...| +||++|.
T Consensus 86 s~DG~~~~v~n~~~----~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~----~I~vVdy 157 (369)
T PF02239_consen 86 SPDGKYVYVANYEP----GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTG----EIWVVDY 157 (369)
T ss_dssp --TTTEEEEEEEET----TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTT----EEEEEET
T ss_pred cCCCCEEEEEecCC----CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCC----eEEEEEe
Confidence 48888776443333 3455666555443333332222111 1235677888999998888887665 8999998
Q ss_pred CCCceeceee-cc-eeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecccccee---eeeeecCCCEEEEEE
Q psy1288 191 ATGKEYPEVL-HR-LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPIT---SQYITNEGPQFVFKT 265 (1012)
Q Consensus 191 ~tg~~~~~t~-~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~---~~~~s~dg~~l~~~t 265 (1012)
...+....+. .. .......|+|||++++-........+..+..+ ..+......+....+ .....|..+.++...
T Consensus 158 ~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~-~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~ 236 (369)
T PF02239_consen 158 SDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKT-GKLVALIDTGKKPHPGPGANFPHPGFGPVWATS 236 (369)
T ss_dssp TTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTT-TEEEEEEE-SSSBEETTEEEEEETTTEEEEEEE
T ss_pred ccccccceeeecccccccccccCcccceeeecccccceeEEEeecc-ceEEEEeeccccccccccccccCCCcceEEeec
Confidence 7765433222 11 12356899999998766543221111111111 122221111111100 111222322332222
Q ss_pred CCCCCCceEEEEeCCC-CcccCcEE---eeccCCCceeeeeEEecCCEEEEEEE-cCceEEEEEEecCCCceeeeecCC-
Q psy1288 266 NKDAPNYRLITIDFDN-FAESNWKT---LIEENKDDVLDWATCVANDKLILSYI-HHVKNVMHLHDLASGKHLYTFPLD- 339 (1012)
Q Consensus 266 n~~~~~~~L~~~dl~~-~~~~~~~~---l~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~l~~~dl~~G~~~~~l~~~- 339 (1012)
........++..+... -....|+. +-..... +-....++++++++... ......+.++|.++-+....+...
T Consensus 237 ~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g--lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~ 314 (369)
T PF02239_consen 237 GLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG--LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP 314 (369)
T ss_dssp BSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS----EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH
T ss_pred cccceecccccCCccccchhhcCeEEEEEECCCCc--ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC
Confidence 2211111122222211 11122332 2222222 11122445567777622 223568899998665443344322
Q ss_pred ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 340 VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 340 ~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
...+..+.+++||++++++.-.... .|..+|.
T Consensus 315 ~~~~~h~ef~~dG~~v~vS~~~~~~--~i~v~D~ 346 (369)
T PF02239_consen 315 GKRVVHMEFNPDGKEVWVSVWDGNG--AIVVYDA 346 (369)
T ss_dssp T--EEEEEE-TTSSEEEEEEE--TT--EEEEEET
T ss_pred CCcEeccEECCCCCEEEEEEecCCC--EEEEEEC
Confidence 2235578899999999998765433 8999998
No 210
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.95 E-value=0.0016 Score=47.66 Aligned_cols=30 Identities=20% Similarity=0.238 Sum_probs=22.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEE
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHF 187 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v 187 (1012)
....+.|||||++|+|+..+.+....+||+
T Consensus 10 ~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 10 DDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 467899999999999999998333567875
No 211
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=96.93 E-value=0.024 Score=60.01 Aligned_cols=127 Identities=12% Similarity=-0.006 Sum_probs=79.6
Q ss_pred EEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhh
Q psy1288 406 VFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGR 485 (1012)
Q Consensus 406 v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 485 (1012)
+.+.+.+|+.+..-..+-+......+..+||-+||.|+...+..|- ...|.+.|+.++.+|++|.+....- .
T Consensus 9 ~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi---~~~l~~~~iR~I~iN~PGf~~t~~~-----~ 80 (297)
T PF06342_consen 9 VKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYI---RPPLDEAGIRFIGINYPGFGFTPGY-----P 80 (297)
T ss_pred EEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhh---hhHHHHcCeEEEEeCCCCCCCCCCC-----c
Confidence 3345556666655544444433344556899999999877654443 3567788999999999997633111 0
Q ss_pred cCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 486 LLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 486 ~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
....+-.+...-+..|.+.-.++ +++.++|||.|+-.++.++..+|- .+.++..|
T Consensus 81 --~~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~ 135 (297)
T PF06342_consen 81 --DQQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINP 135 (297)
T ss_pred --ccccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecC
Confidence 01111123333345555554444 788999999999999999988763 34444433
No 212
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=96.92 E-value=0.0032 Score=71.01 Aligned_cols=47 Identities=13% Similarity=0.003 Sum_probs=41.1
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+||+||++|.-||+.++..++.+++.. ...++++++.||.+.
T Consensus 249 ~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~---------~~~l~~~~~a~H~~~ 295 (330)
T PLN02298 249 DVSIPFIVLHGSADVVTDPDVSRALYEEAKSE---------DKTIKIYDGMMHSLL 295 (330)
T ss_pred hcCCCEEEEecCCCCCCCHHHHHHHHHHhccC---------CceEEEcCCcEeeee
Confidence 67799999999999999999999998888654 357889999999964
No 213
>PTZ00420 coronin; Provisional
Probab=96.87 E-value=0.2 Score=59.94 Aligned_cols=64 Identities=8% Similarity=0.026 Sum_probs=46.6
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
...+..+.|+|+|..++.+.+.+| .|.++|+.+++............+++|+|||+.|+-...+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~Dg----tIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D 188 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDS----FVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVG 188 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCC----eEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecC
Confidence 346889999999999877766554 7999999988754321122345789999999987665433
No 214
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=96.87 E-value=0.01 Score=64.18 Aligned_cols=121 Identities=20% Similarity=0.240 Sum_probs=80.7
Q ss_pred ceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCC----CCcChhHHHHHHhCCeEEEEEcCCCCCCCc
Q psy1288 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQ----PGFSVTKIVFLRDFNGIYAIPNIRGGGEYG 477 (1012)
Q Consensus 402 ~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~----~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g 477 (1012)
..+++.+.. |+..|....+.-++. .+.-.|++.-|....... ...+..+.......|..|+++||||-|..
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a---~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S- 185 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA---KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSS- 185 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC---CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccC-
Confidence 456777666 899998776653332 344567766664221111 11234556666667999999999996632
Q ss_pred hhHHhhhhcCCCcchHhHHHHHHHHHHHcCC-CCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 478 ERWHDGGRLLNKQNVFDDFQCAAEYLIASGY-TQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 478 ~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~-~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
.|.. .....+.|..++++||.++.. ..+++|.+.|+|.||.++..++.++
T Consensus 186 -----~G~~-s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 186 -----TGPP-SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred -----CCCC-CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 1111 123456789999999998654 6899999999999999887766553
No 215
>KOG2314|consensus
Probab=96.84 E-value=0.15 Score=57.78 Aligned_cols=236 Identities=16% Similarity=0.195 Sum_probs=119.0
Q ss_pred CeeeCCEEEEEEEcCCCCeeEEEEEeCCCCc----eEEEcCCCCCCCCCceEeeeEEECCCCcEEE-EEEeC-----CCC
Q psy1288 111 PQRQGDHYFFFHNTGLQNHSVMYIQDSLDGE----ARVFLDPNNLSDDGTVSLGSYSFSEDGKTLA-YCLSS-----SGS 180 (1012)
Q Consensus 111 p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~----~~~L~D~n~la~~g~~~i~~~~~SPDGk~iA-y~~~~-----~G~ 180 (1012)
++|.|.|++=....| -.|| ||+ .+.+.- -.+....+||.-++|+ |+... +..
T Consensus 218 wSP~GTYL~t~Hk~G----I~lW-----GG~~f~r~~RF~H---------p~Vq~idfSP~EkYLVT~s~~p~~~~~~d~ 279 (698)
T KOG2314|consen 218 WSPKGTYLVTFHKQG----IALW-----GGESFDRIQRFYH---------PGVQFIDFSPNEKYLVTYSPEPIIVEEDDN 279 (698)
T ss_pred ecCCceEEEEEeccc----eeee-----cCccHHHHHhccC---------CCceeeecCCccceEEEecCCccccCcccC
Confidence 349999888666544 4556 332 122222 2355678999999986 33222 234
Q ss_pred ceEEEEEEECCCCceece-ee---cceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeec
Q psy1288 181 DWTSMHFKDVATGKEYPE-VL---HRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITN 256 (1012)
Q Consensus 181 ~~~~L~v~dl~tg~~~~~-t~---~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~ 256 (1012)
+..+|.|+|+.||...+- .. .-....-+.||.|+++++-...++-. ..+. ..-.++-..+.+..+|....|+|
T Consensus 280 e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sis--IyEt-psf~lld~Kslki~gIr~FswsP 356 (698)
T KOG2314|consen 280 EGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSIS--IYET-PSFMLLDKKSLKISGIRDFSWSP 356 (698)
T ss_pred CCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEE--EEec-CceeeecccccCCccccCcccCC
Confidence 556999999999987541 11 11123568999999987766532100 0000 00111111122334555445999
Q ss_pred CCCEEEEEECCC---CCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCc-------eEEEEEEe
Q psy1288 257 EGPQFVFKTNKD---APNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHV-------KNVMHLHD 326 (1012)
Q Consensus 257 dg~~l~~~tn~~---~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g-------~~~l~~~d 326 (1012)
-+.-|++-+... +.+..|+.++ +...-..+.|+.- .+-.+.|. ..|++|.+-..+.. .+++-++.
T Consensus 357 ~~~llAYwtpe~~~~parvtL~evP--s~~~iRt~nlfnV-sDckLhWQ--k~gdyLcvkvdR~tK~~~~g~f~n~eIfr 431 (698)
T KOG2314|consen 357 TSNLLAYWTPETNNIPARVTLMEVP--SKREIRTKNLFNV-SDCKLHWQ--KSGDYLCVKVDRHTKSKVKGQFSNLEIFR 431 (698)
T ss_pred CcceEEEEcccccCCcceEEEEecC--ccceeeeccceee-eccEEEec--cCCcEEEEEEEeeccccccceEeeEEEEE
Confidence 999998887532 2234444443 2210000111110 01112222 23356665443221 24555555
Q ss_pred cCCCc-eeeeecCCceEEEeecccccCcEEEEEe-cCCCCCcEEEEEeC
Q psy1288 327 LASGK-HLYTFPLDVGTIVGFSGKKKYSEIFYSF-MSFLQPTIIFHCNI 373 (1012)
Q Consensus 327 l~~G~-~~~~l~~~~~~v~~~~~spdg~~l~~~~-ss~~~p~~l~~~d~ 373 (1012)
+.... ....+.+ ...+..++|.|.|+.+++.. +......+.|.+..
T Consensus 432 ireKdIpve~vel-ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~ 479 (698)
T KOG2314|consen 432 IREKDIPVEVVEL-KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVET 479 (698)
T ss_pred eeccCCCceeeec-chheeeeeeccCCCeEEEEEccccccceeEEEeec
Confidence 52211 1112222 23456899999998876544 44444556777664
No 216
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.84 E-value=0.0058 Score=69.54 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=40.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||+||++|.-||+..+.+++..+... ...++++|+.||.+.
T Consensus 277 ~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~---------~~~l~~i~~~gH~l~ 323 (349)
T PLN02385 277 EVSLPLLILHGEADKVTDPSVSKFLYEKASSS---------DKKLKLYEDAYHSIL 323 (349)
T ss_pred cCCCCEEEEEeCCCCccChHHHHHHHHHcCCC---------CceEEEeCCCeeecc
Confidence 67799999999999999999999998877543 357888999999975
No 217
>PTZ00421 coronin; Provisional
Probab=96.81 E-value=0.29 Score=57.94 Aligned_cols=167 Identities=11% Similarity=0.104 Sum_probs=82.9
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceecee-ecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEV-LHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t-~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
...+..+.|+|++..++.+...++ .|.++|+++++..... .......+++|+|||+.|+....+....-. +...
T Consensus 125 ~~~V~~l~f~P~~~~iLaSgs~Dg----tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIw-D~rs 199 (493)
T PTZ00421 125 TKKVGIVSFHPSAMNVLASAGADM----VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNII-DPRD 199 (493)
T ss_pred CCcEEEEEeCcCCCCEEEEEeCCC----EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEE-ECCC
Confidence 356888999999865555555443 7999999988764322 122335789999999877766544211000 0000
Q ss_pred CceEEEEeeccc-cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCC-CceeeeeEEecCCEEEE
Q psy1288 235 NRSSAYHLTVNV-APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENK-DDVLDWATCVANDKLIL 312 (1012)
Q Consensus 235 ~~~l~~~~~~~~-~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~ 312 (1012)
. +.+....... .......|.++++.|+...........+...|+.+... ......... ......+...+++.+++
T Consensus 200 g-~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~--p~~~~~~d~~~~~~~~~~d~d~~~L~l 276 (493)
T PTZ00421 200 G-TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS--PYSTVDLDQSSALFIPFFDEDTNLLYI 276 (493)
T ss_pred C-cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC--ceeEeccCCCCceEEEEEcCCCCEEEE
Confidence 0 0111000000 01112347777776654432222345677777765431 111111111 11111122234345555
Q ss_pred EEEcCceEEEEEEecCCCce
Q psy1288 313 SYIHHVKNVMHLHDLASGKH 332 (1012)
Q Consensus 313 ~~~~~g~~~l~~~dl~~G~~ 332 (1012)
.... ...|.+|++.+++.
T Consensus 277 ggkg--Dg~Iriwdl~~~~~ 294 (493)
T PTZ00421 277 GSKG--EGNIRCFELMNERL 294 (493)
T ss_pred EEeC--CCeEEEEEeeCCce
Confidence 4332 34678888866543
No 218
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=96.75 E-value=0.0023 Score=68.58 Aligned_cols=46 Identities=24% Similarity=0.314 Sum_probs=37.6
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+++.|+||++|++|.-||+.++++++..+. .+.++..++.||.+.-
T Consensus 196 ~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~ 241 (257)
T TIGR03611 196 RIQHPVLLIANRDDMLVPYTQSLRLAAALP-----------NAQLKLLPYGGHASNV 241 (257)
T ss_pred ccCccEEEEecCcCcccCHHHHHHHHHhcC-----------CceEEEECCCCCCccc
Confidence 778999999999999999999888876543 2356778999998653
No 219
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=96.75 E-value=1.5 Score=49.70 Aligned_cols=241 Identities=15% Similarity=0.058 Sum_probs=104.0
Q ss_pred eeeEEECCCCcEEEEEEeCC--CCceEEEEEEECCCCceeceee---cceeeeeeEEeeCCCeEEEEecCCCCCcc--cC
Q psy1288 159 LGSYSFSEDGKTLAYCLSSS--GSDWTSMHFKDVATGKEYPEVL---HRLKFVSIAWTHDHKGVFYSNQEPKSKSK--KH 231 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~--G~~~~~L~v~dl~tg~~~~~t~---~~~~~~~~~WSpDG~~l~y~~~~~~~~g~--~~ 231 (1012)
.+.+.+|||+++| |+++.. +......|-++-++|+...+.. .+.....++-+|||+.|+...-....... .+
T Consensus 39 Ps~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 39 PSWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp ECCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 4578899999776 555554 3334455666666566543221 22223456778999877665432111000 01
Q ss_pred CCC----CceEEEEeec--c----ccc-eeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceee
Q psy1288 232 SKK----NRSSAYHLTV--N----VAP-ITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLD 300 (1012)
Q Consensus 232 ~~~----~~~l~~~~~~--~----~~~-i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~ 300 (1012)
.+. ...++.+... + ... .-...++|||+++|+. +.+.....+|.++-..++......+........-.
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~-dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh 196 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP-DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRH 196 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE-ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEE
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE-ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcE
Confidence 000 0011111100 0 011 1133589999988765 44444444444443332211111111111111111
Q ss_pred eeEEecCCEEEEEEEcCceEEEEEEecC--CCcee--eeec-CC---ce--EEEeecccccCcEEEEEecCCCCCcEEEE
Q psy1288 301 WATCVANDKLILSYIHHVKNVMHLHDLA--SGKHL--YTFP-LD---VG--TIVGFSGKKKYSEIFYSFMSFLQPTIIFH 370 (1012)
Q Consensus 301 ~~~~~~~~~l~~~~~~~g~~~l~~~dl~--~G~~~--~~l~-~~---~~--~v~~~~~spdg~~l~~~~ss~~~p~~l~~ 370 (1012)
.....+++.+|+..... +.|.++++. +|+.. +.+. .| .+ ....+..+|||+.|+++-.. ...|..
T Consensus 197 ~~f~pdg~~~Yv~~e~s--~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~---~~sI~v 271 (345)
T PF10282_consen 197 LAFSPDGKYAYVVNELS--NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRG---SNSISV 271 (345)
T ss_dssp EEE-TTSSEEEEEETTT--TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECT---TTEEEE
T ss_pred EEEcCCcCEEEEecCCC--CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEecc---CCEEEE
Confidence 22233545666654333 445555553 45321 1121 21 11 34567789999988776544 334555
Q ss_pred EeCCCCCCCCCCcceEEEEeccCCCCCCCCCceEEEEEECCCCceEE
Q psy1288 371 CNIPARVDPNSKLETSIFREIKVPDFDPSLFETKQVFYPSKDGTKIP 417 (1012)
Q Consensus 371 ~d~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~v~~~s~DG~~i~ 417 (1012)
+++.. ++| +.+.+...... .-.++.+.+ ++||..|.
T Consensus 272 f~~d~---~~g--~l~~~~~~~~~-----G~~Pr~~~~-s~~g~~l~ 307 (345)
T PF10282_consen 272 FDLDP---ATG--TLTLVQTVPTG-----GKFPRHFAF-SPDGRYLY 307 (345)
T ss_dssp EEECT---TTT--TEEEEEEEEES-----SSSEEEEEE--TTSSEEE
T ss_pred EEEec---CCC--ceEEEEEEeCC-----CCCccEEEE-eCCCCEEE
Confidence 55510 345 34444332111 112444444 67776553
No 220
>KOG2624|consensus
Probab=96.75 E-value=0.0079 Score=68.16 Aligned_cols=141 Identities=16% Similarity=0.157 Sum_probs=96.0
Q ss_pred CCCCceEEEEEECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc---ChhHHHHHHhCCeEEEEEcCCCCC
Q psy1288 398 PSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF---SVTKIVFLRDFNGIYAIPNIRGGG 474 (1012)
Q Consensus 398 ~~~~~~~~v~~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---~~~~~~~l~~~G~~v~~~d~RG~g 474 (1012)
..++..|...+.+.||--+.. --.|... +++|+|++.||-...+..+-- .....-.|+++||-|-.-|.|| .
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~l-hRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG-n 117 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTL-HRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG-N 117 (403)
T ss_pred HcCCceEEEEEEccCCeEEEE-eeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC-c
Confidence 346778999999999973332 2223331 789999999997554432221 1234456788999999999999 5
Q ss_pred CCchhHHhhhhc-C---C----CcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCC---ceeEEEEc
Q psy1288 475 EYGERWHDGGRL-L---N----KQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPD---LFGAAIVQ 543 (1012)
Q Consensus 475 ~~g~~~~~~~~~-~---~----~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~ 543 (1012)
.|++.-...... . | ..-...|+-+.++++.+.. ..+++..+|||.|+.....++...|+ .++..++.
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T--~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aL 195 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT--GQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIAL 195 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc--cccceEEEEEEccchhheehhcccchhhhhhheeeee
Confidence 565543322211 1 1 1112358889999988763 67899999999999988888877766 46677777
Q ss_pred cC
Q psy1288 544 VG 545 (1012)
Q Consensus 544 ~~ 545 (1012)
+|
T Consensus 196 AP 197 (403)
T KOG2624|consen 196 AP 197 (403)
T ss_pred cc
Confidence 66
No 221
>KOG1516|consensus
Probab=96.74 E-value=0.0027 Score=76.95 Aligned_cols=130 Identities=18% Similarity=0.134 Sum_probs=81.3
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCC-CCcChh-HHHHHHhCCeEEEEEcCCCCCCCchhHHhhhh-c
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQ-PGFSVT-KIVFLRDFNGIYAIPNIRGGGEYGERWHDGGR-L 486 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~-~~~~~~-~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~-~ 486 (1012)
+.|...+ -++.|......+ .|++|++|||.-.... ..+... ....+..+..+|+.+++|-+- +| |...+. .
T Consensus 93 sEDCLyl--NV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~~ 166 (545)
T KOG1516|consen 93 SEDCLYL--NVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDSA 166 (545)
T ss_pred cCCCceE--EEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCCC
Confidence 4454433 455565532222 8999999998432222 112111 123344457999999999642 22 211111 1
Q ss_pred CCCcchHhHHHHHHHHHHHc---CCCCCCcEEEEecChHHHHHHHHHhhC--CCceeEEEEccC
Q psy1288 487 LNKQNVFDDFQCAAEYLIAS---GYTQSSRLAIQGGSNGGLLTAACINQR--PDLFGAAIVQVG 545 (1012)
Q Consensus 487 ~~~~~~~~D~~a~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~~ 545 (1012)
..+.-.+.|...+++|+.++ --.||++|.++|+|+||..+..++... ..+|..+|..+|
T Consensus 167 ~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 167 APGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred CCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 12344467999999999876 237999999999999999887665431 247888888887
No 222
>KOG0318|consensus
Probab=96.71 E-value=0.13 Score=57.93 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=45.0
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-e---ecceeeeeeEEeeCCCeEEEEecC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-V---LHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t---~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
.+..+++||||+++|=+... | .++++|-.+|+.+-. . -..++...++||||++.|+-.+.+
T Consensus 192 FV~~VRysPDG~~Fat~gsD-g----ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGSD-G----KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred ceeeEEECCCCCeEEEecCC-c----cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC
Confidence 46789999999998854432 2 799999999886531 1 122346789999999999887655
No 223
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=96.69 E-value=0.0041 Score=65.46 Aligned_cols=77 Identities=18% Similarity=0.111 Sum_probs=58.6
Q ss_pred eEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEE
Q psy1288 463 GIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIV 542 (1012)
Q Consensus 463 ~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 542 (1012)
|.|+++|.||.|..... ...........|+.+.++.+++.-. -+++.++|+|+||.+++.++.++|++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~----~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPH----WDPDFPDYTTDDLAADLEALREALG--IKKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSC----CGSGSCTHCHHHHHHHHHHHHHHHT--TSSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCC----ccCCcccccHHHHHHHHHHHHHHhC--CCCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 57999999998854321 0122334456788888888887532 34599999999999999999999999999988
Q ss_pred ccC
Q psy1288 543 QVG 545 (1012)
Q Consensus 543 ~~~ 545 (1012)
..+
T Consensus 75 ~~~ 77 (230)
T PF00561_consen 75 ISP 77 (230)
T ss_dssp ESE
T ss_pred Eee
Confidence 866
No 224
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.67 E-value=0.075 Score=64.83 Aligned_cols=95 Identities=17% Similarity=0.288 Sum_probs=63.7
Q ss_pred CEEEEEEEcCCCCeeEEEEEeCCCCceEEE-cCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCC-CceEEEEEEECCCC
Q psy1288 116 DHYFFFHNTGLQNHSVMYIQDSLDGEARVF-LDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSG-SDWTSMHFKDVATG 193 (1012)
Q Consensus 116 ~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L-~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G-~~~~~L~v~dl~tg 193 (1012)
.+++|+....+ .|...|.++...+++ +. ....+-.|.|||||++|||.++..+ .....||+.||++.
T Consensus 319 tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~-------~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 319 AKLAFRNDVTG----NLAYIDYTKGASRAVEIE-------DTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred eeEEEEEcCCC----eEEEEecCCCCceEEEec-------CCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 46888775432 788899888888877 55 3346778999999999999545444 12357999999765
Q ss_pred ce--eceeecceeeeeeEEe--eCCC-eEEEEecC
Q psy1288 194 KE--YPEVLHRLKFVSIAWT--HDHK-GVFYSNQE 223 (1012)
Q Consensus 194 ~~--~~~t~~~~~~~~~~WS--pDG~-~l~y~~~~ 223 (1012)
.. ..+..+.+ .-|+|- ..|. .|.|+++-
T Consensus 388 ~~~~vkl~ve~a--aiprwrv~e~gdt~ivyv~~a 420 (912)
T TIGR02171 388 GSGLVKLPVENA--AIPRWRVLENGDTVIVYVSDA 420 (912)
T ss_pred CCCceEeecccc--cccceEecCCCCeEEEEEcCC
Confidence 43 33444443 346664 5564 47888753
No 225
>COG1647 Esterase/lipase [General function prediction only]
Probab=96.67 E-value=0.0014 Score=66.17 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=49.5
Q ss_pred CCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCchhh
Q psy1288 802 HNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ 874 (1012)
Q Consensus 802 ~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 874 (1012)
.+++ .|+.|+||++|.+|+-||..-|.-+|..+..- +=+|..|.+.||-++...++.
T Consensus 175 ~~~~-------~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~---------~KeL~~~e~SgHVIt~D~Erd 231 (243)
T COG1647 175 RSLD-------KIYSPTLVVQGRQDEMVPAESANFIYDHVESD---------DKELKWLEGSGHVITLDKERD 231 (243)
T ss_pred hhhh-------hcccchhheecccCCCCCHHHHHHHHHhccCC---------cceeEEEccCCceeecchhHH
Confidence 5677 89999999999999999999999999988876 558999999999998654443
No 226
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=96.67 E-value=0.2 Score=58.92 Aligned_cols=80 Identities=18% Similarity=0.076 Sum_probs=53.7
Q ss_pred hHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHH----HHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q psy1288 453 TKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDF----QCAAEYLIASGYTQSSRLAIQGGSNGGLLTAA 528 (1012)
Q Consensus 453 ~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~----~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 528 (1012)
++..++.++|+.|++++.|.-+...+. -.++|. ..|++.+.+. +...+|-++|+|+||.+++.
T Consensus 238 SlVr~lv~qG~~VflIsW~nP~~~~r~-----------~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a~ 304 (560)
T TIGR01839 238 SFVQYCLKNQLQVFIISWRNPDKAHRE-----------WGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCAA 304 (560)
T ss_pred hHHHHHHHcCCeEEEEeCCCCChhhcC-----------CCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHHH
Confidence 456788889999999999875532111 123343 3444444433 45678999999999998886
Q ss_pred ----HHhhCCC-ceeEEEEccC
Q psy1288 529 ----CINQRPD-LFGAAIVQVG 545 (1012)
Q Consensus 529 ----~~~~~p~-~f~a~v~~~~ 545 (1012)
++..+++ .++.++....
T Consensus 305 ~~a~~aA~~~~~~V~sltllat 326 (560)
T TIGR01839 305 LVGHLQALGQLRKVNSLTYLVS 326 (560)
T ss_pred HHHHHHhcCCCCceeeEEeeec
Confidence 5566675 6777776655
No 227
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.63 E-value=0.54 Score=53.60 Aligned_cols=195 Identities=18% Similarity=0.212 Sum_probs=90.2
Q ss_pred EEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec
Q psy1288 118 YFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP 197 (1012)
Q Consensus 118 ~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~ 197 (1012)
++|+-..+ ...|...+....+..--+. . +........+||||+++ |+.+++| .|-++|+.+++...
T Consensus 7 l~~V~~~~---~~~v~viD~~t~~~~~~i~-----~-~~~~h~~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~ 72 (369)
T PF02239_consen 7 LFYVVERG---SGSVAVIDGATNKVVARIP-----T-GGAPHAGLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVA 72 (369)
T ss_dssp EEEEEEGG---GTEEEEEETTT-SEEEEEE-------STTEEEEEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEE
T ss_pred EEEEEecC---CCEEEEEECCCCeEEEEEc-----C-CCCceeEEEecCCCCEE-EEEcCCC----eEEEEECCcccEEE
Confidence 45554433 2356777765443222222 1 11124567899999985 5556654 69999999999765
Q ss_pred eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc-------cceeeeeeecCCCEEEEEECCCCC
Q psy1288 198 EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV-------APITSQYITNEGPQFVFKTNKDAP 270 (1012)
Q Consensus 198 ~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~-------~~i~~~~~s~dg~~l~~~tn~~~~ 270 (1012)
....+....+++.|+||++++.....+......+.. ..+++.+.+... ..+..-..+|....+++...+
T Consensus 73 ~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~-tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd--- 148 (369)
T PF02239_consen 73 TIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAE-TLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD--- 148 (369)
T ss_dssp EEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETT-T--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT---
T ss_pred EEecCCCcceEEEcCCCCEEEEEecCCCceeEeccc-cccceeecccccccccccCCCceeEEecCCCCEEEEEEcc---
Confidence 433344457799999999886554322110001111 111222221110 011112245666665555432
Q ss_pred CceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceee
Q psy1288 271 NYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLY 334 (1012)
Q Consensus 271 ~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~ 334 (1012)
..+++.+|.........+ .+ +............+++++++... +..++.++|.++++...
T Consensus 149 ~~~I~vVdy~d~~~~~~~-~i-~~g~~~~D~~~dpdgry~~va~~--~sn~i~viD~~~~k~v~ 208 (369)
T PF02239_consen 149 TGEIWVVDYSDPKNLKVT-TI-KVGRFPHDGGFDPDGRYFLVAAN--GSNKIAVIDTKTGKLVA 208 (369)
T ss_dssp TTEEEEEETTTSSCEEEE-EE-E--TTEEEEEE-TTSSEEEEEEG--GGTEEEEEETTTTEEEE
T ss_pred CCeEEEEEecccccccee-ee-cccccccccccCcccceeeeccc--ccceeEEEeeccceEEE
Confidence 357888887654311111 11 11122222233334455555433 23477788886665543
No 228
>PTZ00421 coronin; Provisional
Probab=96.60 E-value=1.1 Score=53.20 Aligned_cols=202 Identities=12% Similarity=0.010 Sum_probs=98.9
Q ss_pred ceEeeeEEECC-CCcEEEEEEeCCCCceEEEEEEECCCCce-------e-ceeecceeeeeeEEeeCCCeEEEEe-cCCC
Q psy1288 156 TVSLGSYSFSE-DGKTLAYCLSSSGSDWTSMHFKDVATGKE-------Y-PEVLHRLKFVSIAWTHDHKGVFYSN-QEPK 225 (1012)
Q Consensus 156 ~~~i~~~~~SP-DGk~iAy~~~~~G~~~~~L~v~dl~tg~~-------~-~~t~~~~~~~~~~WSpDG~~l~y~~-~~~~ 225 (1012)
...+..+.||| |+++||-. +.+| .|.++|+.++.. . .+.........+.|+|++..++.+. .+..
T Consensus 75 ~~~V~~v~fsP~d~~~LaSg-S~Dg----tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 75 EGPIIDVAFNPFDPQKLFTA-SEDG----TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred CCCEEEEEEcCCCCCEEEEE-eCCC----EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 34688999999 88877644 3333 788999876532 1 1111223357799999976555553 2211
Q ss_pred CCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEe
Q psy1288 226 SKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCV 305 (1012)
Q Consensus 226 ~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~ 305 (1012)
..-. +.... +...........+....|+++|..|+..+. +..|...|+.++.. ...+..+............
T Consensus 150 VrIW-Dl~tg-~~~~~l~~h~~~V~sla~spdG~lLatgs~----Dg~IrIwD~rsg~~--v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 150 VNVW-DVERG-KAVEVIKCHSDQITSLEWNLDGSLLCTTSK----DKKLNIIDPRDGTI--VSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred EEEE-ECCCC-eEEEEEcCCCCceEEEEEECCCCEEEEecC----CCEEEEEECCCCcE--EEEEecCCCCcceEEEEcC
Confidence 0000 00000 011000000123444458999887665542 34577778766541 2233323221111222222
Q ss_pred cCCEEEEEE-EcCceEEEEEEecCCCc-eeeeecCC-ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 306 ANDKLILSY-IHHVKNVMHLHDLASGK-HLYTFPLD-VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 306 ~~~~l~~~~-~~~g~~~l~~~dl~~G~-~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+++.++... .......+.+||+.+.. ....+... ...+....+++|++.++....+. ..|..+|+
T Consensus 222 ~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgD---g~Iriwdl 289 (493)
T PTZ00421 222 RKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGE---GNIRCFEL 289 (493)
T ss_pred CCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCC---CeEEEEEe
Confidence 324443322 22234578899985433 22222222 12233345788888766654222 35777777
No 229
>KOG1407|consensus
Probab=96.58 E-value=0.079 Score=54.69 Aligned_cols=210 Identities=10% Similarity=0.027 Sum_probs=111.1
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT 192 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t 192 (1012)
-+|.+++-...+ ....+|-.+.. +.+.+.+- .++...+....|+|-..-+.++++.+ . .|.++|...
T Consensus 30 ~~g~~lasgs~d---ktv~v~n~e~~----r~~~~~~~--~gh~~svdql~w~~~~~d~~atas~d--k--~ir~wd~r~ 96 (313)
T KOG1407|consen 30 CDGTKLASGSFD---KTVSVWNLERD----RFRKELVY--RGHTDSVDQLCWDPKHPDLFATASGD--K--TIRIWDIRS 96 (313)
T ss_pred ccCceeeecccC---CceEEEEecch----hhhhhhcc--cCCCcchhhheeCCCCCcceEEecCC--c--eEEEEEecc
Confidence 566666544332 23455654432 22233211 11233667889999887776666532 2 799999999
Q ss_pred CceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeec-----cccce----eeeeeecCCCEEEE
Q psy1288 193 GKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTV-----NVAPI----TSQYITNEGPQFVF 263 (1012)
Q Consensus 193 g~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~-----~~~~i----~~~~~s~dg~~l~~ 263 (1012)
++....+..........|||||.++++...+.. +.+.... +.... .-..|. ..+.++|
T Consensus 97 ~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~------------it~id~r~~~~~~~~~~~~e~ne~~w~-~~nd~Ff 163 (313)
T KOG1407|consen 97 GKCTARIETKGENINITWSPDGEYIAVGNKDDR------------ITFIDARTYKIVNEEQFKFEVNEISWN-NSNDLFF 163 (313)
T ss_pred CcEEEEeeccCcceEEEEcCCCCEEEEecCccc------------EEEEEecccceeehhcccceeeeeeec-CCCCEEE
Confidence 987665444444467899999999999865421 1111110 00000 011255 4556788
Q ss_pred EECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEE
Q psy1288 264 KTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTI 343 (1012)
Q Consensus 264 ~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v 343 (1012)
++|..+ ...|+..+. -+ ....+.++. ..-+-.-..++|+++.+...+ ..+-+||++.=-=.+.++--..-|
T Consensus 164 lt~GlG-~v~ILsyps--Lk--pv~si~AH~-snCicI~f~p~GryfA~GsAD---AlvSLWD~~ELiC~R~isRldwpV 234 (313)
T KOG1407|consen 164 LTNGLG-CVEILSYPS--LK--PVQSIKAHP-SNCICIEFDPDGRYFATGSAD---ALVSLWDVDELICERCISRLDWPV 234 (313)
T ss_pred EecCCc-eEEEEeccc--cc--cccccccCC-cceEEEEECCCCceEeecccc---ceeeccChhHhhhheeeccccCce
Confidence 887532 344555442 11 123333333 223333334455666554332 455677774211123344334556
Q ss_pred EeecccccCcEEEE
Q psy1288 344 VGFSGKKKYSEIFY 357 (1012)
Q Consensus 344 ~~~~~spdg~~l~~ 357 (1012)
..+++|.||+.|+-
T Consensus 235 RTlSFS~dg~~lAS 248 (313)
T KOG1407|consen 235 RTLSFSHDGRMLAS 248 (313)
T ss_pred EEEEeccCcceeec
Confidence 77889999987663
No 230
>PHA02857 monoglyceride lipase; Provisional
Probab=96.56 E-value=0.0057 Score=66.93 Aligned_cols=47 Identities=17% Similarity=0.099 Sum_probs=39.3
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+++.|+||+||++|.-||+..+.++.+.++. .+.+.++++.||.+..
T Consensus 207 ~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~----------~~~~~~~~~~gH~~~~ 253 (276)
T PHA02857 207 KIKTPILILQGTNNEISDVSGAYYFMQHANC----------NREIKIYEGAKHHLHK 253 (276)
T ss_pred cCCCCEEEEecCCCCcCChHHHHHHHHHccC----------CceEEEeCCCcccccC
Confidence 5669999999999999999999988776533 3478899999998764
No 231
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.52 E-value=0.16 Score=54.63 Aligned_cols=165 Identities=10% Similarity=0.010 Sum_probs=82.9
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCccc--CCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKK--HSKK 234 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~--~~~~ 234 (1012)
..+.++++||||+.+|+.....+ ...|++....+.....+ .......|+|++||.-.++........... ....
T Consensus 24 ~~~~s~AvS~dg~~~A~v~~~~~--~~~L~~~~~~~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~ 99 (253)
T PF10647_consen 24 YDVTSPAVSPDGSRVAAVSEGDG--GRSLYVGPAGGPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGT 99 (253)
T ss_pred ccccceEECCCCCeEEEEEEcCC--CCEEEEEcCCCcceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCc
Confidence 45778999999999999983333 34899987654443322 334568899999975333332111000000 0000
Q ss_pred CceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcc------cCcEEeeccCCCceeeeeEEecCC
Q psy1288 235 NRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAE------SNWKTLIEENKDDVLDWATCVAND 308 (1012)
Q Consensus 235 ~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~ 308 (1012)
...+-.........|....+||||.+++++...+.. .+|+..-+..... ....++.... ......+.|.++.
T Consensus 100 ~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~-~~v~va~V~r~~~g~~~~l~~~~~~~~~~-~~~v~~v~W~~~~ 177 (253)
T PF10647_consen 100 GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGG-GRVYVAGVVRDGDGVPRRLTGPRRVAPPL-LSDVTDVAWSDDS 177 (253)
T ss_pred ceeEEecccccCCceEEEEECCCCcEEEEEEecCCC-CeEEEEEEEeCCCCCcceeccceEecccc-cCcceeeeecCCC
Confidence 000000000000145555699999999999865432 4565554321110 0112222221 1222344555556
Q ss_pred EEEEEEEcCceEEEEEEec
Q psy1288 309 KLILSYIHHVKNVMHLHDL 327 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl 327 (1012)
.|++.....+......+..
T Consensus 178 ~L~V~~~~~~~~~~~~v~~ 196 (253)
T PF10647_consen 178 TLVVLGRSAGGPVVRLVSV 196 (253)
T ss_pred EEEEEeCCCCCceeEEEEc
Confidence 7766655544333224555
No 232
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=96.45 E-value=0.0044 Score=67.97 Aligned_cols=45 Identities=20% Similarity=0.206 Sum_probs=38.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+|+++|++|..||+..+++++..+. .+++++.++.||...
T Consensus 221 ~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~-----------~~~~~~i~~agH~~~ 265 (282)
T TIGR03343 221 EIKAKTLVTWGRDDRFVPLDHGLKLLWNMP-----------DAQLHVFSRCGHWAQ 265 (282)
T ss_pred hCCCCEEEEEccCCCcCCchhHHHHHHhCC-----------CCEEEEeCCCCcCCc
Confidence 677999999999999999998888877653 347788999999864
No 233
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=96.38 E-value=0.48 Score=53.32 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=36.2
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC-Cceec-----eee-cceeeeeeEEeeCCCeEEEEe
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT-GKEYP-----EVL-HRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t-g~~~~-----~t~-~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.....++|||+++.. .+... . .|+++|+++ |...+ ... .+.....+.|+|||+.+|.+.
T Consensus 128 ~~~~~~~p~g~~l~v-~~~~~-~--~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~ 193 (330)
T PRK11028 128 CHSANIDPDNRTLWV-PCLKE-D--RIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVN 193 (330)
T ss_pred ccEeEeCCCCCEEEE-eeCCC-C--EEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEe
Confidence 345679999988754 44332 2 789999876 33221 111 122235689999999776654
No 234
>KOG2048|consensus
Probab=96.37 E-value=0.2 Score=58.19 Aligned_cols=67 Identities=4% Similarity=-0.041 Sum_probs=42.3
Q ss_pred eeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccc-cCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 301 WATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKK-KYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 301 ~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~sp-dg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
-+...+|+++.+.. ....+++|++++++....+......+....++| +.+++++..+. .++|.+|+.
T Consensus 481 l~~SsdG~yiaa~~---t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvvats~----nQv~efdi~ 548 (691)
T KOG2048|consen 481 LVVSSDGNYIAAIS---TRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVATSN----NQVFEFDIE 548 (691)
T ss_pred EEEcCCCCEEEEEe---ccceEEEEEcccceeecchhccCcceeeeeccccccCcEEEEecC----CeEEEEecc
Confidence 34455667877765 457899999976665433323334455556664 44677776654 479999993
No 235
>KOG2055|consensus
Probab=96.35 E-value=0.079 Score=58.76 Aligned_cols=190 Identities=6% Similarity=0.017 Sum_probs=103.1
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc----eeeeeeEEeeCCCeEEEEecCCCCCcccCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR----LKFVSIAWTHDHKGVFYSNQEPKSKSKKHS 232 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~----~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~ 232 (1012)
+.+....|+|+|+..+|+..+. --+|.+|+++++..++.... .....+.-|||++.|++....+
T Consensus 258 fPi~~a~f~p~G~~~i~~s~rr----ky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G-------- 325 (514)
T KOG2055|consen 258 FPIQKAEFAPNGHSVIFTSGRR----KYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNG-------- 325 (514)
T ss_pred CccceeeecCCCceEEEecccc----eEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCc--------
Confidence 4567889999999777776542 37999999999876543322 2346688899999888875432
Q ss_pred CCCceEEEEeeccc--------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeE-
Q psy1288 233 KKNRSSAYHLTVNV--------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWAT- 303 (1012)
Q Consensus 233 ~~~~~l~~~~~~~~--------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~- 303 (1012)
...+.|...+. ..+....|+.||+.|+.... .+.+|.+|+.... -..+.+.+. ...-..+.
T Consensus 326 ---~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~----~GeV~v~nl~~~~--~~~rf~D~G-~v~gts~~~ 395 (514)
T KOG2055|consen 326 ---HIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGG----TGEVYVWNLRQNS--CLHRFVDDG-SVHGTSLCI 395 (514)
T ss_pred ---eEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcC----CceEEEEecCCcc--eEEEEeecC-ccceeeeee
Confidence 11111211110 11223348899988887753 3579999997653 111222221 11111222
Q ss_pred EecCCEEEEEEEcCceEEEEEEecC----CCceeeeecCC--ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 304 CVANDKLILSYIHHVKNVMHLHDLA----SGKHLYTFPLD--VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 304 ~~~~~~l~~~~~~~g~~~l~~~dl~----~G~~~~~l~~~--~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..+ ..++..-.+.|. +-+|+.. ++.++...+.. ...|..+.|++|+.-+++..+... ..+-++.+
T Consensus 396 S~n-g~ylA~GS~~Gi--VNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~k--nalrLVHv 466 (514)
T KOG2055|consen 396 SLN-GSYLATGSDSGI--VNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKK--NALRLVHV 466 (514)
T ss_pred cCC-CceEEeccCcce--EEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccc--cceEEEec
Confidence 123 233333333333 4445532 12221111222 456778889999887766554433 33444444
No 236
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.32 E-value=0.96 Score=49.28 Aligned_cols=198 Identities=12% Similarity=0.064 Sum_probs=87.8
Q ss_pred EEEEEEeCCCCceEEEEEEECC--CCceec--eeecceeeeeeEEeeCCCeEEEEecCCCCCcc----cCCCCCceEEEE
Q psy1288 170 TLAYCLSSSGSDWTSMHFKDVA--TGKEYP--EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK----KHSKKNRSSAYH 241 (1012)
Q Consensus 170 ~iAy~~~~~G~~~~~L~v~dl~--tg~~~~--~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~----~~~~~~~~l~~~ 241 (1012)
+.+|..+..-++...|++++++ +|+... +.......+-++|+|+++.||-....+...+. .+.+ +-.+.+.
T Consensus 3 ~~~YiGtyT~~~s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~-~G~Lt~l 81 (346)
T COG2706 3 QTVYIGTYTKRESQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPD-DGRLTFL 81 (346)
T ss_pred eEEEEeeecccCCCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCC-CCeEEEe
Confidence 4455554331112245555554 555432 22222334678999999887666543221111 1110 0111111
Q ss_pred e--eccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCC--c-------eeeeeEEecCCEE
Q psy1288 242 L--TVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKD--D-------VLDWATCVANDKL 310 (1012)
Q Consensus 242 ~--~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~--~-------~~~~~~~~~~~~l 310 (1012)
. .....+..|..++++|+ ++|.+|-......++.+..+ +.......++.+... . .-.....++++.|
T Consensus 82 n~~~~~g~~p~yvsvd~~g~-~vf~AnY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l 159 (346)
T COG2706 82 NRQTLPGSPPCYVSVDEDGR-FVFVANYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYL 159 (346)
T ss_pred eccccCCCCCeEEEECCCCC-EEEEEEccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEE
Confidence 1 11112223555677765 55555554433344433322 322112222222111 0 0001112343444
Q ss_pred EEEEEcCceEEEEEEecCCCceeeeec---CCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 311 ILSYIHHVKNVMHLHDLASGKHLYTFP---LDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 311 ~~~~~~~g~~~l~~~dl~~G~~~~~l~---~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
++. +-|..++++|++++|+....-+ .+...-..+.|.|+++.+|+. +....--.+|.++.
T Consensus 160 ~v~--DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v-~EL~stV~v~~y~~ 222 (346)
T COG2706 160 VVP--DLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLV-NELNSTVDVLEYNP 222 (346)
T ss_pred EEe--ecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEE-eccCCEEEEEEEcC
Confidence 443 3456789999998776422111 122223456788988755544 44444445667765
No 237
>KOG0266|consensus
Probab=96.32 E-value=0.21 Score=58.99 Aligned_cols=197 Identities=14% Similarity=0.127 Sum_probs=102.1
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCc--eece-eecceeeeeeEEeeCCCeEEEEecCCCCCcccCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGK--EYPE-VLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK 233 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~--~~~~-t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~ 233 (1012)
..+....+||||+.++.+.... .+.++++.+++ .... .-.......+.|||||+.|+=.+.+....-. +..
T Consensus 160 ~sv~~~~fs~~g~~l~~~~~~~-----~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriw-d~~ 233 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRALAAASSDG-----LIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIW-DLK 233 (456)
T ss_pred CceEEEEEcCCCCeEEEccCCC-----cEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEe-ecc
Confidence 4566789999999988765432 56677776665 3222 2223346889999999965544443210000 000
Q ss_pred CCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEE
Q psy1288 234 KNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILS 313 (1012)
Q Consensus 234 ~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 313 (1012)
.....+.....-...+....|+|+| .+++....+ ..+...|+.+++ ....+......+.......+++.++..
T Consensus 234 ~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D---~tvriWd~~~~~---~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 234 DDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDD---GTVRIWDVRTGE---CVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred CCCeEEEEecCCCCceEEEEecCCC-CEEEEecCC---CcEEEEeccCCe---EEEeeeccCCceEEEEECCCCCEEEEc
Confidence 0001111110000223344588999 555555433 235556666544 233333332333322333343444443
Q ss_pred EEcCceEEEEEEecCCCce--eeeecCCce--EEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 314 YIHHVKNVMHLHDLASGKH--LYTFPLDVG--TIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 314 ~~~~g~~~l~~~dl~~G~~--~~~l~~~~~--~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.. ...+.+||+.+|.. ...+..... .+....++|+++.++..... ..+-.+|+
T Consensus 307 -s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d----~~~~~w~l 363 (456)
T KOG0266|consen 307 -SY--DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD----RTLKLWDL 363 (456)
T ss_pred -CC--CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC----CeEEEEEc
Confidence 32 45788899977762 233332221 46677889999887765432 24556666
No 238
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=96.28 E-value=0.018 Score=70.47 Aligned_cols=101 Identities=15% Similarity=0.026 Sum_probs=61.6
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchh--HH-----hhh---h---------cCCCc
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGER--WH-----DGG---R---------LLNKQ 490 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~--~~-----~~~---~---------~~~~~ 490 (1012)
...|+|+++||-.+... .|.. ....|.++||.|+.+|+||+|..... .. ... . +....
T Consensus 447 ~g~P~VVllHG~~g~~~--~~~~-lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~r 523 (792)
T TIGR03502 447 DGWPVVIYQHGITGAKE--NALA-FAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLR 523 (792)
T ss_pred CCCcEEEEeCCCCCCHH--HHHH-HHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHH
Confidence 34689999999654332 2332 34456657999999999998865221 00 000 0 01112
Q ss_pred chHhHHHHHHHHHH------Hc----CCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 491 NVFDDFQCAAEYLI------AS----GYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 491 ~~~~D~~a~~~~l~------~~----~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
....|+......+. .. ...+..++.++|||+||++....+...
T Consensus 524 Q~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 524 QSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 33456665555444 11 124567999999999999988877653
No 239
>COG4099 Predicted peptidase [General function prediction only]
Probab=96.27 E-value=0.0089 Score=62.72 Aligned_cols=104 Identities=12% Similarity=-0.011 Sum_probs=69.3
Q ss_pred hhHHHHHHHHhCCCCCCCCCCCCCc--cCCccccccCccceeeeccccccccchhhhcccccCCCCCCCCCCCcccCCCC
Q psy1288 709 TIPVIYFYLTSGPVLQRYPETPNKA--DGSENVRNQDQKLYYHYLGTDQKDDILIAEVLDMLKFNKFTIGYFWESDYGSP 786 (1012)
Q Consensus 709 ~~~~~~fl~~~l~~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 786 (1012)
....++-+++.+... --+|..|+. |-|.| +|.++..+-++|+.|++.+. .. |..
T Consensus 249 l~~~idli~~vlas~-ynID~sRIYviGlSrG-------~~gt~al~~kfPdfFAaa~~--------ia--------G~~ 304 (387)
T COG4099 249 LIEKIDLILEVLAST-YNIDRSRIYVIGLSRG-------GFGTWALAEKFPDFFAAAVP--------IA--------GGG 304 (387)
T ss_pred HHHHHHHHHHHHhhc-cCcccceEEEEeecCc-------chhhHHHHHhCchhhheeee--------ec--------CCC
Confidence 334444454333321 224566665 77888 77787777888999987544 01 111
Q ss_pred CChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeC
Q psy1288 787 ANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIET 861 (1012)
Q Consensus 787 ~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 861 (1012)
+++.. .++ ..++|.-|.|+.+|.-+|.+.|.-.|..|+..+. +|.|..|.
T Consensus 305 d~v~l------v~~------------lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~-------kv~Ytaf~ 354 (387)
T COG4099 305 DRVYL------VRT------------LKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR-------KVNYTAFL 354 (387)
T ss_pred chhhh------hhh------------hccCceEEEEecCCCccccCcceeehHHHHhhcc-------ccchhhhh
Confidence 22111 111 2238999999999999999999999999999977 88888874
No 240
>KOG0305|consensus
Probab=96.22 E-value=0.76 Score=53.19 Aligned_cols=207 Identities=16% Similarity=0.176 Sum_probs=111.9
Q ss_pred EEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceecee-e-cceeeeee
Q psy1288 131 VMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEV-L-HRLKFVSI 208 (1012)
Q Consensus 131 ~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t-~-~~~~~~~~ 208 (1012)
.+|+-+...+....|.+.+ ...+.++.|||+|+.||.....+ .+.++|.+..+..+.. . .....+..
T Consensus 198 ~vylW~~~s~~v~~l~~~~------~~~vtSv~ws~~G~~LavG~~~g-----~v~iwD~~~~k~~~~~~~~h~~rvg~l 266 (484)
T KOG0305|consen 198 SVYLWSASSGSVTELCSFG------EELVTSVKWSPDGSHLAVGTSDG-----TVQIWDVKEQKKTRTLRGSHASRVGSL 266 (484)
T ss_pred eEEEEecCCCceEEeEecC------CCceEEEEECCCCCEEEEeecCC-----eEEEEehhhccccccccCCcCceeEEE
Confidence 3444444456666666643 24688999999999999876643 7889998776654422 2 34456889
Q ss_pred EEeeCCCeEEEEecCCCCCcccCCCCCceEEEEee------cc-c----cceeeeeeecCCCEEEEEECCCCCCceEEEE
Q psy1288 209 AWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT------VN-V----APITSQYITNEGPQFVFKTNKDAPNYRLITI 277 (1012)
Q Consensus 209 ~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~------~~-~----~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~ 277 (1012)
+|. +. ++-+..+. ..++.+.- .. . +.+--..|++|+..|+--.|+ ..++..
T Consensus 267 aW~--~~-~lssGsr~-----------~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnD----N~~~Iw 328 (484)
T KOG0305|consen 267 AWN--SS-VLSSGSRD-----------GKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGND----NVVFIW 328 (484)
T ss_pred ecc--Cc-eEEEecCC-----------CcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCc----cceEec
Confidence 996 22 22222111 01111110 00 0 111122489999887665543 456666
Q ss_pred eCCCCcccCcEEeeccCCCc-eeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEE
Q psy1288 278 DFDNFAESNWKTLIEENKDD-VLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 278 dl~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~ 356 (1012)
|....+ ....+..+...+ .+.|-.+. ..|+.....-....|..|+..+|+....+.. ...|..+.|++..++|+
T Consensus 329 d~~~~~--p~~~~~~H~aAVKA~awcP~q--~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~ 403 (484)
T KOG0305|consen 329 DGLSPE--PKFTFTEHTAAVKALAWCPWQ--SGLLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELL 403 (484)
T ss_pred cCCCcc--ccEEEeccceeeeEeeeCCCc--cCceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEE
Confidence 653332 123343333221 12222221 3344433333356888999877765544432 34567889999999987
Q ss_pred EEecCCCCCcEEEEE
Q psy1288 357 YSFMSFLQPTIIFHC 371 (1012)
Q Consensus 357 ~~~ss~~~p~~l~~~ 371 (1012)
.+.--...--.||.|
T Consensus 404 sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 404 STHGYSENQITLWKY 418 (484)
T ss_pred EecCCCCCcEEEEec
Confidence 665333222234444
No 241
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=96.22 E-value=2.5 Score=46.19 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=121.4
Q ss_pred ccCCCCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCce
Q psy1288 103 WDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDW 182 (1012)
Q Consensus 103 ~~~~~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~ 182 (1012)
+..+.+-...++++++|-.-..+.++.-.-|..+..+|..+.| +--.+....+ ..+++++||+++. +++...+
T Consensus 39 ~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~l-n~~~~~g~~p---~yvsvd~~g~~vf-~AnY~~g-- 111 (346)
T COG2706 39 LGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFL-NRQTLPGSPP---CYVSVDEDGRFVF-VANYHSG-- 111 (346)
T ss_pred cCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEe-eccccCCCCC---eEEEECCCCCEEE-EEEccCc--
Confidence 3334444445777777766655545555667776655654432 2111111122 4578999998874 4443322
Q ss_pred EEEEEEECCC-Cceece---eec----------ceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeecc---
Q psy1288 183 TSMHFKDVAT-GKEYPE---VLH----------RLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVN--- 245 (1012)
Q Consensus 183 ~~L~v~dl~t-g~~~~~---t~~----------~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~--- 245 (1012)
.|.+..+.. |..... ... .........+|||+.|+..... .+...+|.-..+
T Consensus 112 -~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG----------~Dri~~y~~~dg~L~ 180 (346)
T COG2706 112 -SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLG----------TDRIFLYDLDDGKLT 180 (346)
T ss_pred -eEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecC----------CceEEEEEcccCccc
Confidence 455555532 433211 000 0113456889999877665421 111112211100
Q ss_pred ---------ccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEe--eccC--CCceeeeeEE-ecCCEEE
Q psy1288 246 ---------VAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTL--IEEN--KDDVLDWATC-VANDKLI 311 (1012)
Q Consensus 246 ---------~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l--~~~~--~~~~~~~~~~-~~~~~l~ 311 (1012)
..+.+...|.|+|+..|+++..+. ...++..+...++.+..+.+ ++++ .......+.+ .+|+.||
T Consensus 181 ~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s-tV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLY 259 (346)
T COG2706 181 PADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS-TVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLY 259 (346)
T ss_pred cccccccCCCCCcceEEEcCCCcEEEEEeccCC-EEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEE
Confidence 122234468899998888876542 34455555433331111111 1221 0111122232 4556666
Q ss_pred EEEEcCceEEEEEEecCCCceeeeec-CC-ceE-EEeecccccCcEEEEEecCCCCCcEEEEEeCCCCCCCCC
Q psy1288 312 LSYIHHVKNVMHLHDLASGKHLYTFP-LD-VGT-IVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDPNS 381 (1012)
Q Consensus 312 ~~~~~~g~~~l~~~dl~~G~~~~~l~-~~-~~~-v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~~~~~~~g 381 (1012)
++-+....-.++.++..+|+. ..+. .+ .+. -..|.+++.++-|+.. +...+.-.+|++|- ++|
T Consensus 260 asNRg~dsI~~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~g~~Liaa-~q~sd~i~vf~~d~-----~TG 325 (346)
T COG2706 260 ASNRGHDSIAVFSVDPDGGKL-ELVGITPTEGQFPRDFNINPSGRFLIAA-NQKSDNITVFERDK-----ETG 325 (346)
T ss_pred EecCCCCeEEEEEEcCCCCEE-EEEEEeccCCcCCccceeCCCCCEEEEE-ccCCCcEEEEEEcC-----CCc
Confidence 654433222344444444542 2221 11 222 2456777777755544 44444567888887 477
No 242
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.18 E-value=0.32 Score=53.64 Aligned_cols=65 Identities=14% Similarity=-0.022 Sum_probs=38.9
Q ss_pred eEeeeEEECCCCcEEEEEEe-----CC-CCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 157 VSLGSYSFSEDGKTLAYCLS-----SS-GSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~-----~~-G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.+..+..+.|||+..+=+.. .. ....-.||.+|..++..+.....-....+++|||||+.+|++-
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aD 181 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVAD 181 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEe
Confidence 35567888899866543333 11 1222378999875555443222122236789999999887764
No 243
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.17 E-value=0.012 Score=61.28 Aligned_cols=29 Identities=14% Similarity=0.217 Sum_probs=25.9
Q ss_pred CceEEEcccCCCCCCCcchHHHHHHHHHH
Q psy1288 816 PATLLMTADHDDRVSPVHSLKFAATLQEK 844 (1012)
Q Consensus 816 ~p~l~~~g~~D~rv~~~~~~~~~~~l~~~ 844 (1012)
-|++|+||..|..|.+..++++.+..+..
T Consensus 170 ~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred CCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 48999999999999999999998887664
No 244
>KOG4389|consensus
Probab=96.05 E-value=0.0057 Score=68.39 Aligned_cols=112 Identities=27% Similarity=0.265 Sum_probs=72.0
Q ss_pred cEEEEEcCCCCCCCCCCcChhHHHHHHhC-CeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcC---C
Q psy1288 433 PCILYGYGGFAVSLQPGFSVTKIVFLRDF-NGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASG---Y 508 (1012)
Q Consensus 433 P~vv~~hGg~~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~---~ 508 (1012)
-++|++|||.-.+.++..+.-....|+.. ..+|+.+|||-+. +|-.+........+.-..-|..-+++|+.++- -
T Consensus 136 tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFG 214 (601)
T KOG4389|consen 136 TVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFG 214 (601)
T ss_pred eEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhC
Confidence 38899999854444444432212234433 4899999999643 44332212222222233568888999998873 3
Q ss_pred CCCCcEEEEecChHHHHHHHHHhhCC--CceeEEEEccC
Q psy1288 509 TQSSRLAIQGGSNGGLLTAACINQRP--DLFGAAIVQVG 545 (1012)
Q Consensus 509 ~d~~~i~i~G~S~GG~l~~~~~~~~p--~~f~a~v~~~~ 545 (1012)
.||++|.++|.|+|+..+.+-+...+ .+|+.+|+++|
T Consensus 215 Gnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 215 GNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSG 253 (601)
T ss_pred CCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcC
Confidence 79999999999999977665544321 27888888888
No 245
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=96.04 E-value=0.15 Score=56.04 Aligned_cols=119 Identities=14% Similarity=0.059 Sum_probs=67.6
Q ss_pred EEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHh-------hhhcCCC
Q psy1288 417 PMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHD-------GGRLLNK 489 (1012)
Q Consensus 417 ~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~-------~~~~~~~ 489 (1012)
...++.|+.. ....+|+.|++.|.......-...-....++. .|+.-++....-.|..-..... ......+
T Consensus 78 ~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~-~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 78 RFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLK-EGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred EEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHH-cCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 3455667665 23457888888885322211111111234455 4987666654332211111000 0001112
Q ss_pred cchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEE
Q psy1288 490 QNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAA 540 (1012)
Q Consensus 490 ~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~ 540 (1012)
...+.+....+.|+.++++ .++++.|.|+||.++..+++..|.....+
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~v 203 (348)
T PF09752_consen 156 RATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALV 203 (348)
T ss_pred hHHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEE
Confidence 2345666777889998866 48999999999999999988888754433
No 246
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.02 E-value=3.2 Score=45.76 Aligned_cols=242 Identities=14% Similarity=0.121 Sum_probs=116.4
Q ss_pred CeeeCCEEEEEEE-----cCCCCeeEEEEEeCCC--CceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceE
Q psy1288 111 PQRQGDHYFFFHN-----TGLQNHSVMYIQDSLD--GEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWT 183 (1012)
Q Consensus 111 p~~dG~~~yy~~~-----~~~~~~~~l~~~~~~~--g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~ 183 (1012)
.+|||+.+|.... .-|+-...|-..+..+ ...|+.+-+...+.-. ......++|.|||++.+.--. ...
T Consensus 43 ~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~-~~~~~~~ls~dgk~~~V~N~T---Pa~ 118 (342)
T PF06433_consen 43 LSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV-PYKNMFALSADGKFLYVQNFT---PAT 118 (342)
T ss_dssp E-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS---GGGEEE-TTSSEEEEEEES---SSE
T ss_pred ECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec-ccccceEEccCCcEEEEEccC---CCC
Confidence 3588988774322 1122222333334332 3445555432111111 134577999999998654332 235
Q ss_pred EEEEEECCCCceece-eecceeeeeeEEe--------eCCCeEEEEecCCCCCcccCCCCCceEEEEee--ccccc-eee
Q psy1288 184 SMHFKDVATGKEYPE-VLHRLKFVSIAWT--------HDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT--VNVAP-ITS 251 (1012)
Q Consensus 184 ~L~v~dl~tg~~~~~-t~~~~~~~~~~WS--------pDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~--~~~~~-i~~ 251 (1012)
.+-|+|++.++...+ ..+++. .-+-|. .||+.+-+.=+. ++. ........ ..... +..
T Consensus 119 SVtVVDl~~~kvv~ei~~PGC~-~iyP~~~~~F~~lC~DGsl~~v~Ld~-------~Gk--~~~~~t~~F~~~~dp~f~~ 188 (342)
T PF06433_consen 119 SVTVVDLAAKKVVGEIDTPGCW-LIYPSGNRGFSMLCGDGSLLTVTLDA-------DGK--EAQKSTKVFDPDDDPLFEH 188 (342)
T ss_dssp EEEEEETTTTEEEEEEEGTSEE-EEEEEETTEEEEEETTSCEEEEEETS-------TSS--EEEEEEEESSTTTS-B-S-
T ss_pred eEEEEECCCCceeeeecCCCEE-EEEecCCCceEEEecCCceEEEEECC-------CCC--EeEeeccccCCCCcccccc
Confidence 899999999987653 233442 112222 344332222111 111 11000000 00011 122
Q ss_pred eeeecCCCEEEEEECCCCCCceEEEEeCCCCcc---cCcEEeeccC---CCce--eeeeEE-ecCCEEEEEEEcC-----
Q psy1288 252 QYITNEGPQFVFKTNKDAPNYRLITIDFDNFAE---SNWKTLIEEN---KDDV--LDWATC-VANDKLILSYIHH----- 317 (1012)
Q Consensus 252 ~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~---~~~~~l~~~~---~~~~--~~~~~~-~~~~~l~~~~~~~----- 317 (1012)
+.++..+++++|.+- .+.++.+++...+. ..|..+.... .+.. .+.+.. ...++||+....+
T Consensus 189 ~~~~~~~~~~~F~Sy----~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsH 264 (342)
T PF06433_consen 189 PAYSRDGGRLYFVSY----EGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSH 264 (342)
T ss_dssp -EEETTTTEEEEEBT----TSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-T
T ss_pred cceECCCCeEEEEec----CCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCc
Confidence 335567788999873 56788888866431 1222121111 1111 111222 2335777754432
Q ss_pred --ceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 318 --VKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 318 --g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+-.+||++|+++++...+++++. .+.+++.+.|.+=++|..+. .-..|+.+|.
T Consensus 265 KdpgteVWv~D~~t~krv~Ri~l~~-~~~Si~Vsqd~~P~L~~~~~--~~~~l~v~D~ 319 (342)
T PF06433_consen 265 KDPGTEVWVYDLKTHKRVARIPLEH-PIDSIAVSQDDKPLLYALSA--GDGTLDVYDA 319 (342)
T ss_dssp TS-EEEEEEEETTTTEEEEEEEEEE-EESEEEEESSSS-EEEEEET--TTTEEEEEET
T ss_pred cCCceEEEEEECCCCeEEEEEeCCC-ccceEEEccCCCcEEEEEcC--CCCeEEEEeC
Confidence 34689999999888877777652 23345667777666666544 2357999998
No 247
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=95.97 E-value=0.0056 Score=64.41 Aligned_cols=48 Identities=19% Similarity=0.086 Sum_probs=40.1
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
.+|+|++||.+|+.||...+++.++.|++.|. .+++..|++.||++..
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-------~v~~~~~~g~gH~i~~ 202 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-------NVEFHEYPGGGHEISP 202 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT--------GEEEEEETT-SSS--H
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-------CEEEEEcCCCCCCCCH
Confidence 39999999999999999999999999999988 9999999999999864
No 248
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=95.97 E-value=0.027 Score=48.55 Aligned_cols=58 Identities=17% Similarity=0.039 Sum_probs=42.6
Q ss_pred CceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCc
Q psy1288 413 GTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYG 477 (1012)
Q Consensus 413 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g 477 (1012)
|.+|.+..+.|+. .++.+|+++||-...+. .|.. ..+.|+++||.|+..|.||.|...
T Consensus 1 G~~L~~~~w~p~~----~~k~~v~i~HG~~eh~~--ry~~-~a~~L~~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 1 GTKLFYRRWKPEN----PPKAVVVIVHGFGEHSG--RYAH-LAEFLAEQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred CcEEEEEEecCCC----CCCEEEEEeCCcHHHHH--HHHH-HHHHHHhCCCEEEEECCCcCCCCC
Confidence 5678888887765 25789999999644332 2333 456777889999999999998653
No 249
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=95.97 E-value=0.0011 Score=73.51 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=41.8
Q ss_pred hhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 792 FEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 792 ~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
++.|.=+=.++.+. +|+.|+|+..|-.|+-||+.--...|.+|+. +-++++||..||+....
T Consensus 246 ~~~L~Y~D~~nfA~-------ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~----------~K~l~vyp~~~He~~~~ 307 (320)
T PF05448_consen 246 FETLSYFDAVNFAR-------RIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG----------PKELVVYPEYGHEYGPE 307 (320)
T ss_dssp HHHHHTT-HHHHGG-------G--SEEEEEEETT-SSS-HHHHHHHHCC--S----------SEEEEEETT--SSTTHH
T ss_pred HHHHhhhhHHHHHH-------HcCCCEEEEEecCCCCCCchhHHHHHhccCC----------CeeEEeccCcCCCchhh
Confidence 33344344446777 8999999999999999999988888888754 67999999999987643
No 250
>KOG0772|consensus
Probab=95.96 E-value=0.18 Score=56.80 Aligned_cols=196 Identities=18% Similarity=0.167 Sum_probs=108.1
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee-------cceeeeeeEEeeCCCeEEEEecCCCCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL-------HRLKFVSIAWTHDHKGVFYSNQEPKSK 227 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~-------~~~~~~~~~WSpDG~~l~y~~~~~~~~ 227 (1012)
+...+....|.|+.+....+.+.+| +|++||+..-+.....+ ........+|+|||+.|+-...++...
T Consensus 267 Hia~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 267 HIAELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred ceeeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee
Confidence 3457788999999999999888777 67888876543211111 122347789999999877655443210
Q ss_pred cccCCCCCce-EEEEee--ccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcc--cCcEEeeccCCCceeeee
Q psy1288 228 SKKHSKKNRS-SAYHLT--VNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAE--SNWKTLIEENKDDVLDWA 302 (1012)
Q Consensus 228 g~~~~~~~~~-l~~~~~--~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~--~~~~~l~~~~~~~~~~~~ 302 (1012)
-...++.... .++... ....++....||+||+.|+-....+ .|-..|+..... ..|.-|...-+ ...-.
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~----tLKvWDLrq~kkpL~~~tgL~t~~~--~tdc~ 416 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDD----TLKVWDLRQFKKPLNVRTGLPTPFP--GTDCC 416 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCC----ceeeeeccccccchhhhcCCCccCC--CCccc
Confidence 0000000000 111111 1124566667999999876655432 355566665431 11222211111 11112
Q ss_pred EEecCCEEEEEEE--cCc--eEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecC
Q psy1288 303 TCVANDKLILSYI--HHV--KNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 303 ~~~~~~~l~~~~~--~~g--~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss 361 (1012)
..++ +.|++.-. .++ ...|+.++..+=+.+..|..+..++....|.|.=++|++....
T Consensus 417 FSPd-~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgd 478 (641)
T KOG0772|consen 417 FSPD-DKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGD 478 (641)
T ss_pred cCCC-ceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCC
Confidence 2334 55555432 222 3468888875545556666666677778899888887766544
No 251
>KOG0973|consensus
Probab=95.96 E-value=0.29 Score=60.01 Aligned_cols=22 Identities=32% Similarity=0.297 Sum_probs=18.1
Q ss_pred ceEeeeEEECCCCcEEEEEEeC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSS 177 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~ 177 (1012)
...+.-++|||||+++|.+.+.
T Consensus 69 ~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 69 DGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCceeEEEECCCCCeEeeccCc
Confidence 4567889999999999986653
No 252
>KOG2055|consensus
Probab=95.93 E-value=0.2 Score=55.77 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=44.5
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEec
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
.+..+.+||||+.||+.-.. ..|+++...|++..-.-.-.+..+++.||-||+.|+.+..
T Consensus 305 ~~e~FeVShd~~fia~~G~~-----G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~ 364 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAGNN-----GHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGG 364 (514)
T ss_pred hhheeEecCCCCeEEEcccC-----ceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcC
Confidence 56789999999999875432 3899999999986532222334688999999988877653
No 253
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=95.92 E-value=0.028 Score=64.86 Aligned_cols=42 Identities=14% Similarity=0.154 Sum_probs=34.6
Q ss_pred ceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 817 ATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 817 p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
.+.|-+|..|... .....+|++.|+++|+ ++.|..+++ ||-.
T Consensus 351 r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~-------~~~~~~~~G-GHd~ 392 (411)
T PRK10439 351 RIVLEAGRREPMI-MRANQALYAQLHPAGH-------SVFWRQVDG-GHDA 392 (411)
T ss_pred eEEEeCCCCCchH-HHHHHHHHHHHHHCCC-------cEEEEECCC-CcCH
Confidence 4778899888543 4578899999999998 999999987 7954
No 254
>KOG1273|consensus
Probab=95.91 E-value=0.28 Score=52.03 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=89.8
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcc--cCCCCC
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK--KHSKKN 235 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~--~~~~~~ 235 (1012)
....+||+-|.++|.+...+ .|.++|..|-..-+ ++..-....+++||+||+.|+-.+.+-...-. ..+.-.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG-----~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l 100 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANG-----RVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPL 100 (405)
T ss_pred cceEEeccCcceeeeeccCC-----cEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCce
Confidence 34689999999999987643 67888887755322 22211235889999999988766543211000 011111
Q ss_pred ceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeee-----EEecCCEE
Q psy1288 236 RSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWA-----TCVANDKL 310 (1012)
Q Consensus 236 ~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~l 310 (1012)
.++.|. .++-...|.|..+...+.+--+.. -+.+++..+. ..+++.+++.-+... ....|+++
T Consensus 101 ~rirf~-----spv~~~q~hp~k~n~~va~~~~~s---p~vi~~s~~~----h~~Lp~d~d~dln~sas~~~fdr~g~yI 168 (405)
T KOG1273|consen 101 KRIRFD-----SPVWGAQWHPRKRNKCVATIMEES---PVVIDFSDPK----HSVLPKDDDGDLNSSASHGVFDRRGKYI 168 (405)
T ss_pred eEEEcc-----CccceeeeccccCCeEEEEEecCC---cEEEEecCCc----eeeccCCCccccccccccccccCCCCEE
Confidence 111111 112122356655555554432211 2334444333 344444433222211 12233455
Q ss_pred EEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEEEEecC
Q psy1288 311 ILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 311 ~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~~~~ss 361 (1012)
+.. .+...|.+++..+-+-...+... ...+..+-++..|+.+++..+.
T Consensus 169 itG---tsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsD 217 (405)
T KOG1273|consen 169 ITG---TSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSD 217 (405)
T ss_pred EEe---cCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCC
Confidence 443 34566777776543321111111 2345556667778777766543
No 255
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=95.89 E-value=0.2 Score=51.62 Aligned_cols=123 Identities=15% Similarity=0.156 Sum_probs=64.7
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCc-hhHHhhhhcCC
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYG-ERWHDGGRLLN 488 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g-~~~~~~~~~~~ 488 (1012)
-.+|++|..|-..|+.-. ..+++.|+..-| ++..+. .|. ....+|..+|+.|+.+|.-.+-|.. +.-.+ ..
T Consensus 9 ~~~~~~I~vwet~P~~~~-~~~~~tiliA~G-f~rrmd-h~a-gLA~YL~~NGFhViRyDsl~HvGlSsG~I~e----ft 80 (294)
T PF02273_consen 9 LEDGRQIRVWETRPKNNE-PKRNNTILIAPG-FARRMD-HFA-GLAEYLSANGFHVIRYDSLNHVGLSSGDINE----FT 80 (294)
T ss_dssp ETTTEEEEEEEE---TTS----S-EEEEE-T-T-GGGG-GGH-HHHHHHHTTT--EEEE---B-----------------
T ss_pred cCCCCEEEEeccCCCCCC-cccCCeEEEecc-hhHHHH-HHH-HHHHHHhhCCeEEEeccccccccCCCCChhh----cc
Confidence 358999999999998643 455678887665 333331 232 3456677789999998865332211 10000 00
Q ss_pred CcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 489 KQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 489 ~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
-.....|+..+++||...+ ..+++++..|..|-++...++. ++ ..-.|..+|
T Consensus 81 ms~g~~sL~~V~dwl~~~g---~~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVG 132 (294)
T PF02273_consen 81 MSIGKASLLTVIDWLATRG---IRRIGLIAASLSARIAYEVAAD-IN-LSFLITAVG 132 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES-
T ss_pred hHHhHHHHHHHHHHHHhcC---CCcchhhhhhhhHHHHHHHhhc-cC-cceEEEEee
Confidence 0012358888999999775 4679999999999999888875 44 455666667
No 256
>KOG0275|consensus
Probab=95.88 E-value=0.35 Score=51.14 Aligned_cols=57 Identities=12% Similarity=0.196 Sum_probs=37.0
Q ss_pred EEEEEEEcCceEEEEEEecCCCceeeeecCC---ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 309 KLILSYIHHVKNVMHLHDLASGKHLYTFPLD---VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~---~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
++++..+. +.++++++ .|+..+.++.. .|.......||.|..++..... ..+|-+..
T Consensus 407 h~iVCNrs---ntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED----~vlYCF~~ 466 (508)
T KOG0275|consen 407 HFIVCNRS---NTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGEWIYCIGED----GVLYCFSV 466 (508)
T ss_pred eEEEEcCC---CeEEEEec-cceEEeeeccCCccCCceEEEEecCCCcEEEEEccC----cEEEEEEe
Confidence 55555433 45788888 56666666544 3455556678999988877644 35787776
No 257
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=95.85 E-value=0.021 Score=59.81 Aligned_cols=46 Identities=22% Similarity=0.259 Sum_probs=27.6
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 700 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~ 700 (1012)
.++.| .|.++|.+|+.++...+.++...... . ..++. -.+||.+-.
T Consensus 159 ~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~--------~--~~v~~-h~gGH~vP~ 204 (212)
T PF03959_consen 159 KISIP-TLHVIGENDPVVPPERSEALAEMFDP--------D--ARVIE-HDGGHHVPR 204 (212)
T ss_dssp T---E-EEEEEETT-SSS-HHHHHHHHHHHHH--------H--EEEEE-ESSSSS---
T ss_pred cCCCC-eEEEEeCCCCCcchHHHHHHHHhccC--------C--cEEEE-ECCCCcCcC
Confidence 46778 99999999999998888777766654 1 23333 467887644
No 258
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=95.76 E-value=0.033 Score=59.01 Aligned_cols=45 Identities=20% Similarity=0.108 Sum_probs=35.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||++|++|..||.....++...+. ...++++++.||.+.
T Consensus 191 ~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~ 235 (251)
T TIGR02427 191 AIAVPTLCIAGDQDGSTPPELVREIADLVP-----------GARFAEIRGAGHIPC 235 (251)
T ss_pred hcCCCeEEEEeccCCcCChHHHHHHHHhCC-----------CceEEEECCCCCccc
Confidence 677999999999999999987776655442 236788999999754
No 259
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=95.75 E-value=0.029 Score=61.11 Aligned_cols=45 Identities=18% Similarity=0.207 Sum_probs=36.0
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+||++|++|..||..++.++.+.+. -++++++++.||.+.
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~ 262 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVP-----------TATLHVVPGGGHLVH 262 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhcc-----------CCeEEEECCCCCccc
Confidence 677999999999999999988777654432 246788999999864
No 260
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=95.72 E-value=0.14 Score=56.18 Aligned_cols=79 Identities=16% Similarity=0.141 Sum_probs=55.5
Q ss_pred HHcCCcccCCCCCCcccCCC-CCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcccc
Q psy1288 626 LLGYSPLHNIQGPDELKGKQ-YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTK 704 (1012)
Q Consensus 626 ~~~~sP~~~~~~p~~~~~~~-~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~ 704 (1012)
+...++...+. ... .| +|++||..|..|+..++..++...... +..+...++++|........
T Consensus 218 ~~~~d~~~~~~------~i~~~P-~l~~~G~~D~~vp~~~~~~~~~~~~~~---------~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 218 LLLLDPFDDAE------KISPRP-VLLVHGERDEVVPLRDAEDLYEAARER---------PKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred hccCcchhhHh------hcCCcc-eEEEecCCCcccchhhhHHHHhhhccC---------CceEEEecCCccccccCccH
Confidence 45555555554 233 56 999999999999999998887776542 56778888999987652222
Q ss_pred -chhhhhHHHHHHHHhC
Q psy1288 705 -QFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 705 -~~~~~~~~~~fl~~~l 720 (1012)
..+.+.++..|+.+.+
T Consensus 282 ~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 282 AVEQALDKLAEFLERHL 298 (299)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 1255667778888764
No 261
>KOG1407|consensus
Probab=95.71 E-value=1.4 Score=45.88 Aligned_cols=178 Identities=13% Similarity=0.193 Sum_probs=89.5
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEE
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSA 239 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~ 239 (1012)
-...|||||++++++-.. -.|-.+|..+-+...............|..++. +||....- |. -..+-
T Consensus 110 i~i~wsp~g~~~~~~~kd-----D~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd-~Fflt~Gl---G~-----v~ILs 175 (313)
T KOG1407|consen 110 INITWSPDGEYIAVGNKD-----DRITFIDARTYKIVNEEQFKFEVNEISWNNSND-LFFLTNGL---GC-----VEILS 175 (313)
T ss_pred eEEEEcCCCCEEEEecCc-----ccEEEEEecccceeehhcccceeeeeeecCCCC-EEEEecCC---ce-----EEEEe
Confidence 357899999999986543 267778877665543222222336689987665 55655321 11 00111
Q ss_pred EEeec-----cc--cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEE
Q psy1288 240 YHLTV-----NV--APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLIL 312 (1012)
Q Consensus 240 ~~~~~-----~~--~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 312 (1012)
|.... +. ...-...++|+|++|++-+.+ ..+-..|++.-- ..+.++.-+.. ++.+....++.++.
T Consensus 176 ypsLkpv~si~AH~snCicI~f~p~GryfA~GsAD----AlvSLWD~~ELi---C~R~isRldwp-VRTlSFS~dg~~lA 247 (313)
T KOG1407|consen 176 YPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSAD----ALVSLWDVDELI---CERCISRLDWP-VRTLSFSHDGRMLA 247 (313)
T ss_pred ccccccccccccCCcceEEEEECCCCceEeecccc----ceeeccChhHhh---hheeeccccCc-eEEEEeccCcceee
Confidence 11000 00 011122489999999886632 112223332111 12233333222 22222222244444
Q ss_pred EEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCC
Q psy1288 313 SYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSF 362 (1012)
Q Consensus 313 ~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~ 362 (1012)
+..++ .-|-+-..++|....+++.. +....++|.|...-|+|..+..
T Consensus 248 SaSED--h~IDIA~vetGd~~~eI~~~-~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 248 SASED--HFIDIAEVETGDRVWEIPCE-GPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred ccCcc--ceEEeEecccCCeEEEeecc-CCceeEEecCCCceeeEEecCC
Confidence 44443 22334455678766666543 2223568999888888887654
No 262
>KOG4497|consensus
Probab=95.69 E-value=0.05 Score=57.67 Aligned_cols=105 Identities=17% Similarity=0.123 Sum_probs=60.2
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCc-ccCCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKS-KKHSK 233 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g-~~~~~ 233 (1012)
|...++..+|||||+.|+-+.... ..|-|+.+.+.+..-+.......-++++.|||+.-+..+.++=..- ....-
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~----lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c 165 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFD----LRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSC 165 (447)
T ss_pred CCCcceeeeECCCcceEeeeecce----eEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhh
Confidence 456788999999999999877653 3566666665554323333333467899999998777665420000 00000
Q ss_pred CCceEEEE---eeccccceeeeeeecCCCEEEEEEC
Q psy1288 234 KNRSSAYH---LTVNVAPITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 234 ~~~~l~~~---~~~~~~~i~~~~~s~dg~~l~~~tn 266 (1012)
....++-+ .+.+.++++ |+|||..|++.-|
T Consensus 166 ~~W~ll~~f~~dT~Dltgie---WsPdg~~laVwd~ 198 (447)
T KOG4497|consen 166 KAWILLKEFKLDTIDLTGIE---WSPDGNWLAVWDN 198 (447)
T ss_pred HHHHHHHhcCCCcccccCce---ECCCCcEEEEecc
Confidence 00000000 011224555 9999999988865
No 263
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=95.66 E-value=0.11 Score=58.20 Aligned_cols=53 Identities=25% Similarity=0.166 Sum_probs=43.0
Q ss_pred HhHHHHHHHHHHHcCCCCC--CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 493 FDDFQCAAEYLIASGYTQS--SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 493 ~~D~~a~~~~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.-|.+.|+.++...-.... -++...|+|+||+++..++.-.|..+.+++.-++
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~ 217 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSS 217 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCc
Confidence 3588888888888733222 3788889999999999998888999999998776
No 264
>KOG0315|consensus
Probab=95.60 E-value=0.73 Score=47.52 Aligned_cols=187 Identities=11% Similarity=0.121 Sum_probs=105.3
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecc--eeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHR--LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~--~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
.+....++||++.||-.. +..|+++|+.++...+ .+++. .+...+.|--||++.|-.+.++.
T Consensus 42 qVNrLeiTpdk~~LAaa~------~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt--------- 106 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAAG------NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGT--------- 106 (311)
T ss_pred ceeeEEEcCCcchhhhcc------CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCce---------
Confidence 567889999999998643 3489999999998755 23332 34678899999998865554421
Q ss_pred CceEEEEeeccc-------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecC
Q psy1288 235 NRSSAYHLTVNV-------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVAN 307 (1012)
Q Consensus 235 ~~~l~~~~~~~~-------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 307 (1012)
.+++-.+.... ..+......|....|+...+ ...+...|+.... --.+|+|+. +..++......+
T Consensus 107 -~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dq----sg~irvWDl~~~~--c~~~liPe~-~~~i~sl~v~~d 178 (311)
T KOG0315|consen 107 -VKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQ----SGNIRVWDLGENS--CTHELIPED-DTSIQSLTVMPD 178 (311)
T ss_pred -EEEEeccCcccchhccCCCCcceEEecCCcceEEeecC----CCcEEEEEccCCc--cccccCCCC-CcceeeEEEcCC
Confidence 12221111000 22222234555555544432 3457777775532 125677776 455666555433
Q ss_pred CEEEEEEEcCceEEEEEEecCCCceeee------ecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 308 DKLILSYIHHVKNVMHLHDLASGKHLYT------FPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 308 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~------l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+..++..+. ....|+|++-++..... +....+.+..-.+|||++.|+-.. +. .+++.++.
T Consensus 179 gsml~a~nn--kG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~s-sd---ktv~iwn~ 244 (311)
T KOG0315|consen 179 GSMLAAANN--KGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCS-SD---KTVKIWNT 244 (311)
T ss_pred CcEEEEecC--CccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeec-CC---ceEEEEec
Confidence 444443333 45688888854332211 222245555667899998766433 22 24555555
No 265
>KOG0272|consensus
Probab=95.56 E-value=0.45 Score=52.47 Aligned_cols=206 Identities=12% Similarity=0.056 Sum_probs=104.2
Q ss_pred eeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCC--CcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceee
Q psy1288 129 HSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSED--GKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKF 205 (1012)
Q Consensus 129 ~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPD--Gk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~ 205 (1012)
...+|-++. .+..+.+. ++...+++..|+|. +..|| +.+.+| .+.++++++..+++ ++......
T Consensus 198 ~~kvW~~~~--~~~~~~l~------gH~~~v~~~~fhP~~~~~~la-t~s~Dg----tvklw~~~~e~~l~~l~gH~~RV 264 (459)
T KOG0272|consen 198 LVKVWSVPQ--CNLLQTLR------GHTSRVGAAVFHPVDSDLNLA-TASADG----TVKLWKLSQETPLQDLEGHLARV 264 (459)
T ss_pred ceeEeecCC--cceeEEEe------ccccceeeEEEccCCCcccee-eeccCC----ceeeeccCCCcchhhhhcchhhh
Confidence 467776554 24444444 24568999999998 44454 444444 56777877766554 33344557
Q ss_pred eeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCccc
Q psy1288 206 VSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAES 285 (1012)
Q Consensus 206 ~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~ 285 (1012)
+.++|.|+|+.|.-.+.+...+-. +......+++.+- -..++-..+|.+||.-+ .....+. -.+| .|+.++.
T Consensus 265 s~VafHPsG~~L~TasfD~tWRlW-D~~tk~ElL~QEG-Hs~~v~~iaf~~DGSL~-~tGGlD~-~~Rv--WDlRtgr-- 336 (459)
T KOG0272|consen 265 SRVAFHPSGKFLGTASFDSTWRLW-DLETKSELLLQEG-HSKGVFSIAFQPDGSLA-ATGGLDS-LGRV--WDLRTGR-- 336 (459)
T ss_pred eeeeecCCCceeeecccccchhhc-ccccchhhHhhcc-cccccceeEecCCCcee-eccCccc-hhhe--eecccCc--
Confidence 889999999988777655432111 0000011111110 00233334577887633 3322221 1222 4555554
Q ss_pred CcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEe
Q psy1288 286 NWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSF 359 (1012)
Q Consensus 286 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ 359 (1012)
-.-.+...-..++.....++ ++.+.....| ....+||+..-.....++....-|+.+-++|+...+.+++
T Consensus 337 -~im~L~gH~k~I~~V~fsPN-Gy~lATgs~D--nt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~Ta 406 (459)
T KOG0272|consen 337 -CIMFLAGHIKEILSVAFSPN-GYHLATGSSD--NTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTA 406 (459)
T ss_pred -EEEEecccccceeeEeECCC-ceEEeecCCC--CcEEEeeecccccceecccccchhhheEecccCCeEEEEc
Confidence 11222222233333333333 5544443333 4566778843333344444344466777888666655554
No 266
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.54 E-value=0.14 Score=53.22 Aligned_cols=60 Identities=13% Similarity=0.014 Sum_probs=40.8
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l 720 (1012)
...+| +.++.|.+|..|...+...|.... ++...+.+++ |||.|-... ...+++++.+.+
T Consensus 174 pl~~p-i~~~~G~~D~~vs~~~~~~W~~~t----------~~~f~l~~fd-GgHFfl~~~------~~~v~~~i~~~l 233 (244)
T COG3208 174 PLACP-IHAFGGEKDHEVSRDELGAWREHT----------KGDFTLRVFD-GGHFFLNQQ------REEVLARLEQHL 233 (244)
T ss_pred CcCcc-eEEeccCcchhccHHHHHHHHHhh----------cCCceEEEec-Ccceehhhh------HHHHHHHHHHHh
Confidence 47889 999999999998766665555443 4467888876 679886532 233445555554
No 267
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.48 E-value=0.058 Score=63.33 Aligned_cols=112 Identities=22% Similarity=0.249 Sum_probs=65.8
Q ss_pred CcEEEEEcCCCCCCCCCCc--ChhHHHHHHhCCeEEEEEcCCCCCCCch---hHHhhhhcCCCcchHhHHHHHHHHHHHc
Q psy1288 432 NPCILYGYGGFAVSLQPGF--SVTKIVFLRDFNGIYAIPNIRGGGEYGE---RWHDGGRLLNKQNVFDDFQCAAEYLIAS 506 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~d~RG~g~~g~---~~~~~~~~~~~~~~~~D~~a~~~~l~~~ 506 (1012)
.|++|++ ||.+... ..+ ......+..+.|..+++..+|--|..-. .-.+.-+...-...+.|+...++++..+
T Consensus 29 gpifl~~-ggE~~~~-~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIE-PFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp SEEEEEE---SS-HH-HHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEE-CCCCccc-hhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 7888887 4433221 111 1223455556699999999996543211 1111111122235577888888888755
Q ss_pred C-CCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 507 G-YTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 507 ~-~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
- ..+..++.++|+|+||.|++++-.++|+++.++++.++
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSa 146 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSA 146 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET-
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccc
Confidence 3 34556899999999999999999999999999998876
No 268
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.31 E-value=1.3 Score=49.92 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=61.4
Q ss_pred hHHHHHHHcCCcccCCCCCCcccCCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCC
Q psy1288 620 SSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 699 (1012)
Q Consensus 620 ~~~~~~~~~~sP~~~~~~p~~~~~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~ 699 (1012)
++..+.+...+|+.+.+ +.+.| -|+|.|.+|....+..+.-++.+|. ++..++..|+.+|+..
T Consensus 243 p~f~~L~~ivDP~~Y~~------rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~----------G~K~lr~vPN~~H~~~ 305 (367)
T PF10142_consen 243 PEFDKLMQIVDPYSYRD------RLTMP-KYIINATGDEFFVPDSSNFYYDKLP----------GEKYLRYVPNAGHSLI 305 (367)
T ss_pred HHHHHHHHhcCHHHHHH------hcCcc-EEEEecCCCceeccCchHHHHhhCC----------CCeeEEeCCCCCcccc
Confidence 44455667789998876 67888 8999999999999988888888775 3557888899999986
Q ss_pred CccccchhhhhHHHHHHHHhCCC
Q psy1288 700 KPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 700 ~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
. .+....+..|+...+..
T Consensus 306 ~-----~~~~~~l~~f~~~~~~~ 323 (367)
T PF10142_consen 306 G-----SDVVQSLRAFYNRIQNG 323 (367)
T ss_pred h-----HHHHHHHHHHHHHHHcC
Confidence 6 23445566888876543
No 269
>KOG1446|consensus
Probab=95.29 E-value=1.3 Score=47.25 Aligned_cols=171 Identities=13% Similarity=0.051 Sum_probs=86.5
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKN 235 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~ 235 (1012)
...+.....||-+.... +.+ ..-+|++||+...+-.-...... -.-+++.|.| |+|....+. +.
T Consensus 100 ~~~V~sL~~sP~~d~Fl-S~S----~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~G--LifA~~~~~--------~~ 163 (311)
T KOG1446|consen 100 KKRVNSLSVSPKDDTFL-SSS----LDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEG--LIFALANGS--------EL 163 (311)
T ss_pred CceEEEEEecCCCCeEE-ecc----cCCeEEeeEecCCCCceEEecCC-CcceeECCCC--cEEEEecCC--------Ce
Confidence 34677888888774432 222 22389999998655322111111 1346787877 444432211 01
Q ss_pred ceEEEEeeccc----------------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCcee
Q psy1288 236 RSSAYHLTVNV----------------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVL 299 (1012)
Q Consensus 236 ~~l~~~~~~~~----------------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~ 299 (1012)
-+++-.+..+. ..+ -+||||+.|++.++. ..++.+|.=.+....-...-+......+
T Consensus 164 IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l---~FS~dGK~iLlsT~~----s~~~~lDAf~G~~~~tfs~~~~~~~~~~ 236 (311)
T KOG1446|consen 164 IKLYDLRSFDKGPFTTFSITDNDEAEWTDL---EFSPDGKSILLSTNA----SFIYLLDAFDGTVKSTFSGYPNAGNLPL 236 (311)
T ss_pred EEEEEecccCCCCceeEccCCCCccceeee---EEcCCCCEEEEEeCC----CcEEEEEccCCcEeeeEeeccCCCCcce
Confidence 12221111100 223 389999999999964 3466666544431100111111112223
Q ss_pred eeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecccccC
Q psy1288 300 DWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKY 352 (1012)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg 352 (1012)
+....++ ...+++...+ .+|.+|++++|.....+..+ .+.+.-+.|+|..
T Consensus 237 ~a~ftPd-s~Fvl~gs~d--g~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~ 287 (311)
T KOG1446|consen 237 SATFTPD-SKFVLSGSDD--GTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRY 287 (311)
T ss_pred eEEECCC-CcEEEEecCC--CcEEEEEcCCCcEeeEecCCCCCCccccccCCce
Confidence 4444456 4444444444 46778888888876666554 3434444566643
No 270
>KOG0973|consensus
Probab=95.26 E-value=0.6 Score=57.37 Aligned_cols=101 Identities=11% Similarity=0.019 Sum_probs=62.4
Q ss_pred CeeeCCEEEEEEEcCCCCeeEEEEEeCCC--------C------ceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEe
Q psy1288 111 PQRQGDHYFFFHNTGLQNHSVMYIQDSLD--------G------EARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLS 176 (1012)
Q Consensus 111 p~~dG~~~yy~~~~~~~~~~~l~~~~~~~--------g------~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~ 176 (1012)
+++||.++|.-.++ ..-.||.+...+ | .|+.+.- | .++...+.++.||||+.++|=..-
T Consensus 77 ~S~dG~~lAsGSDD---~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~---l-~~H~~DV~Dv~Wsp~~~~lvS~s~ 149 (942)
T KOG0973|consen 77 FSPDGSYLASGSDD---RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSI---L-RGHDSDVLDVNWSPDDSLLVSVSL 149 (942)
T ss_pred ECCCCCeEeeccCc---ceEEEeeecccCCcccccccccccccceeeEEEE---E-ecCCCccceeccCCCccEEEEecc
Confidence 34999998875433 345678776210 1 1111100 0 113346789999999998874432
Q ss_pred CCCCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecC
Q psy1288 177 SSGSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 177 ~~G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
...|.++|..+.+.......+ ...-+++|-|=|++|+-.+++
T Consensus 150 -----DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD 192 (942)
T KOG0973|consen 150 -----DNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD 192 (942)
T ss_pred -----cceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC
Confidence 247889999888654322222 235679999999988877655
No 271
>KOG1445|consensus
Probab=95.13 E-value=0.17 Score=57.99 Aligned_cols=92 Identities=15% Similarity=0.146 Sum_probs=57.5
Q ss_pred CeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeee
Q psy1288 128 NHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFV 206 (1012)
Q Consensus 128 ~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~ 206 (1012)
++-.||+....+. +|....|...-..+...+.+.+|.|=-.-++-+++ ...+|.+||+.+++..- +.-....+.
T Consensus 650 g~i~lWr~~a~gl-~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~as----yd~Ti~lWDl~~~~~~~~l~gHtdqIf 724 (1012)
T KOG1445|consen 650 GQINLWRLTANGL-PENEMTPEKILTIHGEKITSLRFHPLAADVLAVAS----YDSTIELWDLANAKLYSRLVGHTDQIF 724 (1012)
T ss_pred ceEEEEEeccCCC-CcccCCcceeeecccceEEEEEecchhhhHhhhhh----ccceeeeeehhhhhhhheeccCcCcee
Confidence 4567888876543 23333333322224456778888885444433333 24589999999887542 222223457
Q ss_pred eeEEeeCCCeEEEEecCC
Q psy1288 207 SIAWTHDHKGVFYSNQEP 224 (1012)
Q Consensus 207 ~~~WSpDG~~l~y~~~~~ 224 (1012)
+++|||||+.++-+..++
T Consensus 725 ~~AWSpdGr~~AtVcKDg 742 (1012)
T KOG1445|consen 725 GIAWSPDGRRIATVCKDG 742 (1012)
T ss_pred EEEECCCCcceeeeecCc
Confidence 899999999999887653
No 272
>KOG1838|consensus
Probab=95.10 E-value=0.23 Score=55.91 Aligned_cols=187 Identities=15% Similarity=0.117 Sum_probs=100.8
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccc-----hhhhhHHHHHHHH
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQ-----FPLTIPVIYFYLT 718 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~-----~~~~~~~~~fl~~ 718 (1012)
...|.++++||..-..-. .....+...++. .++-.++.|.+|=+|..-..... -+|+..+++++.+
T Consensus 123 ~~~P~vvilpGltg~S~~-~YVr~lv~~a~~--------~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~ 193 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHE-SYVRHLVHEAQR--------KGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKK 193 (409)
T ss_pred CCCcEEEEecCCCCCChh-HHHHHHHHHHHh--------CCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHH
Confidence 456889999997322110 122223333333 34666777888744432111111 3455555555554
Q ss_pred hCCCCCCCCCCCCCc-cCCcccc--------ccCccceeeeccccccccchhh-------------------hcccccCC
Q psy1288 719 SGPVLQRYPETPNKA-DGSENVR--------NQDQKLYYHYLGTDQKDDILIA-------------------EVLDMLKF 770 (1012)
Q Consensus 719 ~l~~~~~~~d~~~~~-GgS~g~~--------~~~~~~~~~~~~~t~~~~~~~~-------------------~~~~~~~~ 770 (1012)
. +|.++..+ |-|.|.. .++.-...+++++..-.|++++ ++.+++.-
T Consensus 194 ~------~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~ 267 (409)
T KOG1838|consen 194 R------YPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLR 267 (409)
T ss_pred h------CCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhh
Confidence 4 44454444 6676622 1222356677777777776633 12222111
Q ss_pred CCCC---CCCCCc-----------------ccCCCCCChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCC
Q psy1288 771 NKFT---IGYFWE-----------------SDYGSPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVS 830 (1012)
Q Consensus 771 ~~~~---~~~~~~-----------------~~~g~~~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~ 830 (1012)
+..+ ....|. ..||-++ --++++.-|++++++ +|+.|+|+|++.+||.||
T Consensus 268 ~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~aSs~~~v~-------~I~VP~L~ina~DDPv~p 337 (409)
T KOG1838|consen 268 HRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKKASSSNYVD-------KIKVPLLCINAADDPVVP 337 (409)
T ss_pred hhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhhcchhhhcc-------cccccEEEEecCCCCCCC
Confidence 1110 011110 0223332 235688999999999 999999999999999999
Q ss_pred CcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCC
Q psy1288 831 PVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGH 865 (1012)
Q Consensus 831 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH 865 (1012)
.. +.=.-.+.+.. -+.|++-...||
T Consensus 338 ~~-~ip~~~~~~np---------~v~l~~T~~GGH 362 (409)
T KOG1838|consen 338 EE-AIPIDDIKSNP---------NVLLVITSHGGH 362 (409)
T ss_pred cc-cCCHHHHhcCC---------cEEEEEeCCCce
Confidence 85 22221222221 567777777778
No 273
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.09 E-value=0.084 Score=55.80 Aligned_cols=101 Identities=16% Similarity=0.107 Sum_probs=60.7
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
.|.++++||....................+ +.++.+|.||.|... . . ..........+..+.+. ...
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~g~g~s~----~---~---~~~~~~~~~~~~~~~~~--~~~ 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAAR-YRVIAPDLRGHGRSD----P---A---GYSLSAYADDLAALLDA--LGL 87 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccc-eEEEEecccCCCCCC----c---c---cccHHHHHHHHHHHHHH--hCC
Confidence 448999999875443222210111111112 899999999877543 0 0 01111112223333332 122
Q ss_pred CcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
.++.+.|+|+||.++..++.++|+.+..++...+
T Consensus 88 ~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 88 EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred CceEEEEecccHHHHHHHHHhcchhhheeeEecC
Confidence 3489999999999999999999998888887765
No 274
>KOG3253|consensus
Probab=95.07 E-value=0.39 Score=55.53 Aligned_cols=46 Identities=17% Similarity=0.246 Sum_probs=37.5
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCC
Q psy1288 644 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 700 (1012)
Q Consensus 644 ~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~ 700 (1012)
.+.| +|++.|-+|.+|.+..-.++..++++. +.+++..+++|.+.-
T Consensus 303 mk~P-VLFV~Gsnd~mcspn~ME~vreKMqA~----------~elhVI~~adhsmai 348 (784)
T KOG3253|consen 303 MKQP-VLFVIGSNDHMCSPNSMEEVREKMQAE----------VELHVIGGADHSMAI 348 (784)
T ss_pred cCCc-eEEEecCCcccCCHHHHHHHHHHhhcc----------ceEEEecCCCccccC
Confidence 5677 999999999999988777777777764 568888899998753
No 275
>KOG0645|consensus
Probab=95.00 E-value=5.6 Score=41.81 Aligned_cols=193 Identities=12% Similarity=0.099 Sum_probs=96.0
Q ss_pred eEeeeEEECCC-CcEEEEEEeCCCCceEEEEEEECCCCcee--ceee---cceeeeeeEEeeCCCeEEEEecCCCCCccc
Q psy1288 157 VSLGSYSFSED-GKTLAYCLSSSGSDWTSMHFKDVATGKEY--PEVL---HRLKFVSIAWTHDHKGVFYSNQEPKSKSKK 230 (1012)
Q Consensus 157 ~~i~~~~~SPD-Gk~iAy~~~~~G~~~~~L~v~dl~tg~~~--~~t~---~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~ 230 (1012)
.++-.++|+|- |..|| +... ...|+++++.++... ...+ ......+++|||.|+.|+-.+.+..
T Consensus 15 ~r~W~~awhp~~g~ilA-scg~----Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t----- 84 (312)
T KOG0645|consen 15 DRVWSVAWHPGKGVILA-SCGT----DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT----- 84 (312)
T ss_pred CcEEEEEeccCCceEEE-eecC----CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce-----
Confidence 36778899998 76443 3321 237888888754321 1111 1223578999999998877765421
Q ss_pred CCCCCceEEEEeecc-------c----cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCcee
Q psy1288 231 HSKKNRSSAYHLTVN-------V----APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVL 299 (1012)
Q Consensus 231 ~~~~~~~l~~~~~~~-------~----~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~ 299 (1012)
..+++...+ + ..+....|+.+|..|+--+... ..=++.++. ..+.+-...|.++..+..
T Consensus 85 ------~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK--SVWiWe~de-ddEfec~aVL~~HtqDVK- 154 (312)
T KOG0645|consen 85 ------VVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK--SVWIWEIDE-DDEFECIAVLQEHTQDVK- 154 (312)
T ss_pred ------EEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC--eEEEEEecC-CCcEEEEeeecccccccc-
Confidence 112221100 0 2233456999999888776432 233444442 111110112222222221
Q ss_pred eeeEEecCCEEEEEEEcCceEEEEEEecCCCce--eeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEE--EeC
Q psy1288 300 DWATCVANDKLILSYIHHVKNVMHLHDLASGKH--LYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFH--CNI 373 (1012)
Q Consensus 300 ~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~--~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~--~d~ 373 (1012)
.+.+-....|+++..-+..-++|..+. ++.. .+.|.....++...+|++.|.+++-..+. ..-.||+ .++
T Consensus 155 -~V~WHPt~dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD--~tv~Iw~~~~~~ 228 (312)
T KOG0645|consen 155 -HVIWHPTEDLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDD--GTVSIWRLYTDL 228 (312)
T ss_pred -EEEEcCCcceeEEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEEEecCCCceEEEecCC--cceEeeeeccCc
Confidence 122222134555544443344554443 3332 23444445577788888888776543322 2234555 444
No 276
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=94.94 E-value=0.1 Score=63.62 Aligned_cols=49 Identities=16% Similarity=0.261 Sum_probs=38.1
Q ss_pred cEEEEEEeCCCCceEEEEEEECCCCceece-eecceeeeeeEEeeCCCeEEE-Ee
Q psy1288 169 KTLAYCLSSSGSDWTSMHFKDVATGKEYPE-VLHRLKFVSIAWTHDHKGVFY-SN 221 (1012)
Q Consensus 169 k~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t~~~~~~~~~~WSpDG~~l~y-~~ 221 (1012)
.+|||..+..| +|.++|.+++..+.. .......-+|+|||||+.|+| ++
T Consensus 319 tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts 369 (912)
T TIGR02171 319 AKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTG 369 (912)
T ss_pred eeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEe
Confidence 57899887555 899999998887655 333444577999999999999 54
No 277
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.82 E-value=0.03 Score=40.85 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=18.9
Q ss_pred eecceeeeeeEEeeCCCeEEEEecCC
Q psy1288 199 VLHRLKFVSIAWTHDHKGVFYSNQEP 224 (1012)
Q Consensus 199 t~~~~~~~~~~WSpDG~~l~y~~~~~ 224 (1012)
+........++|||||++|+|++.+.
T Consensus 5 t~~~~~~~~p~~SpDGk~i~f~s~~~ 30 (39)
T PF07676_consen 5 TNSPGDDGSPAWSPDGKYIYFTSNRN 30 (39)
T ss_dssp S-SSSSEEEEEE-TTSSEEEEEEECT
T ss_pred ccCCccccCEEEecCCCEEEEEecCC
Confidence 33344457899999999999998763
No 278
>KOG0272|consensus
Probab=94.71 E-value=0.4 Score=52.86 Aligned_cols=184 Identities=11% Similarity=0.088 Sum_probs=94.1
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
..+++.++|.|+|++|+=+.- ..+-+++|+.++..+- ..-...+..+++|-|||+-++-...+.-.+-. +.-.
T Consensus 261 ~~RVs~VafHPsG~~L~Tasf-----D~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvW-DlRt 334 (459)
T KOG0272|consen 261 LARVSRVAFHPSGKFLGTASF-----DSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVW-DLRT 334 (459)
T ss_pred hhhheeeeecCCCceeeeccc-----ccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhhee-eccc
Confidence 358899999999999985433 2467889999987643 22333456889999999744433332110000 0001
Q ss_pred CceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEe-cCCEEEEE
Q psy1288 235 NRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCV-ANDKLILS 313 (1012)
Q Consensus 235 ~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~~ 313 (1012)
...+.+... -.+.|-.-.|+|.|-+|+--+.++ ..+++ |+..-. ..-+++..... +..+... ..+..+++
T Consensus 335 gr~im~L~g-H~k~I~~V~fsPNGy~lATgs~Dn--t~kVW--DLR~r~---~ly~ipAH~nl-VS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 335 GRCIMFLAG-HIKEILSVAFSPNGYHLATGSSDN--TCKVW--DLRMRS---ELYTIPAHSNL-VSQVKYSPQEGYFLVT 405 (459)
T ss_pred CcEEEEecc-cccceeeEeECCCceEEeecCCCC--cEEEe--eecccc---cceecccccch-hhheEecccCCeEEEE
Confidence 112222110 012222335999997776555332 23333 333221 01222222122 2222222 22444444
Q ss_pred EEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEE
Q psy1288 314 YIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 314 ~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~ 356 (1012)
..-|. .+.+|...+....+.+....+-|..+..++|+..|+
T Consensus 406 asyD~--t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~ 446 (459)
T KOG0272|consen 406 ASYDN--TVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIA 446 (459)
T ss_pred cccCc--ceeeecCCCcccchhhcCCccceEEEEeccCCceEE
Confidence 33333 344555545555555655566677788888887544
No 279
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=94.62 E-value=6.4 Score=44.89 Aligned_cols=231 Identities=17% Similarity=0.113 Sum_probs=118.6
Q ss_pred CCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCC-------CC
Q psy1288 108 YSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSS-------GS 180 (1012)
Q Consensus 108 ~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~-------G~ 180 (1012)
....+|.|.++++....+ -.+|--+..+ .-..+.. -.+-...+||.|++|.--.... +.
T Consensus 37 ~~~~SP~G~~l~~~~~~~----V~~~~g~~~~-~l~~~~~---------~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~s 102 (561)
T COG5354 37 YVSESPLGTYLFSEHAAG----VECWGGPSKA-KLVRFRH---------PDVKYLDFSPNEKYLVTWSREPIIEPEIEIS 102 (561)
T ss_pred heeecCcchheehhhccc----eEEccccchh-heeeeec---------CCceecccCcccceeeeeccCCccChhhccC
Confidence 344568898887755432 2334221111 1122211 1355678999999987544322 11
Q ss_pred c---eEEEEEEECCCCceece----eecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEe-eccc------
Q psy1288 181 D---WTSMHFKDVATGKEYPE----VLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHL-TVNV------ 246 (1012)
Q Consensus 181 ~---~~~L~v~dl~tg~~~~~----t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~-~~~~------ 246 (1012)
. ..+++++|.++|....- ........-+.||-|.+..+++... .+..|+ ..|.
T Consensus 103 p~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~-------------sl~i~e~t~n~~~~p~~ 169 (561)
T COG5354 103 PFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS-------------SLYIHEITDNIEEHPFK 169 (561)
T ss_pred CccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccC-------------eEEEEecCCccccCchh
Confidence 1 12799999999987531 1111122357899999888776422 233333 2221
Q ss_pred ----cceeeeeeecC--CCEEEEEECC-CC--CCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcC
Q psy1288 247 ----APITSQYITNE--GPQFVFKTNK-DA--PNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHH 317 (1012)
Q Consensus 247 ----~~i~~~~~s~d--g~~l~~~tn~-~~--~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~ 317 (1012)
.++.-..|+|. ++.|++.+.. .+ ...+++.++..+.. ..+.|+.- +...+.|-. -++.+.+....+
T Consensus 170 ~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l--~tk~lfk~-~~~qLkW~~--~g~~ll~l~~t~ 244 (561)
T COG5354 170 NLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVL--VTKNLFKV-SGVQLKWQV--LGKYLLVLVMTH 244 (561)
T ss_pred hccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCee--eeeeeEee-cccEEEEec--CCceEEEEEEEe
Confidence 23333347775 4456666543 22 23455555533221 11223222 222333322 224444322211
Q ss_pred --------ceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 318 --------VKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 318 --------g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
|.+.|+++++. +...+..-.-.+.|..+.|+|.++++++.+ ...|..+-.+|+
T Consensus 245 ~ksnKsyfgesnLyl~~~~-e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~--g~~pa~~s~~~l 305 (561)
T COG5354 245 TKSNKSYFGESNLYLLRIT-ERSIPVEKDLKDPVHDFTWEPLSSRFAVIS--GYMPASVSVFDL 305 (561)
T ss_pred eecccceeccceEEEEeec-ccccceeccccccceeeeecccCCceeEEe--cccccceeeccc
Confidence 34789999984 432221111145677899999999877654 235666666776
No 280
>KOG2096|consensus
Probab=94.61 E-value=1.1 Score=47.65 Aligned_cols=37 Identities=16% Similarity=0.009 Sum_probs=24.0
Q ss_pred EEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEE
Q psy1288 320 NVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 320 ~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~ 356 (1012)
+.|.++..++|+....+..- .+.++.++|+++|+.++
T Consensus 352 s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~a 389 (420)
T KOG2096|consen 352 SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIA 389 (420)
T ss_pred CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEe
Confidence 45666776667643333221 56788899999998655
No 281
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=94.59 E-value=0.24 Score=49.77 Aligned_cols=80 Identities=14% Similarity=0.023 Sum_probs=55.9
Q ss_pred CcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q psy1288 449 GFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAA 528 (1012)
Q Consensus 449 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 528 (1012)
.++......|+++|+.|+-+|-.- --|.+ ........|+...+++..++- ..+++.++|.|+|+-+...
T Consensus 16 ~~d~~~a~~l~~~G~~VvGvdsl~-----Yfw~~----rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~ 84 (192)
T PF06057_consen 16 DLDKQIAEALAKQGVPVVGVDSLR-----YFWSE----RTPEQTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPF 84 (192)
T ss_pred hhhHHHHHHHHHCCCeEEEechHH-----HHhhh----CCHHHHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHH
Confidence 566667778888999999998531 12322 222344567777777666552 3578999999999988888
Q ss_pred HHhhCCCceeE
Q psy1288 529 CINQRPDLFGA 539 (1012)
Q Consensus 529 ~~~~~p~~f~a 539 (1012)
+.++.|...++
T Consensus 85 ~~nrLp~~~r~ 95 (192)
T PF06057_consen 85 IYNRLPAALRA 95 (192)
T ss_pred HHhhCCHHHHh
Confidence 88888864433
No 282
>KOG0271|consensus
Probab=94.54 E-value=0.19 Score=54.53 Aligned_cols=62 Identities=23% Similarity=0.310 Sum_probs=43.1
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
.-+..+.|||||++||=.+-. ..+.++|-.+|+.+..-.+. .....++||.|.+-|+-.+.+
T Consensus 368 ~lVn~V~fSPd~r~IASaSFD-----kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkD 430 (480)
T KOG0271|consen 368 ALVNHVSFSPDGRYIASASFD-----KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKD 430 (480)
T ss_pred hheeeEEECCCccEEEEeecc-----cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCC
Confidence 346789999999999855432 26889999999976422222 235789999998755444443
No 283
>KOG0273|consensus
Probab=94.41 E-value=5.5 Score=44.95 Aligned_cols=62 Identities=15% Similarity=0.181 Sum_probs=47.8
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+..+.|+-||..||+..-. | .+++++..++....+....+.+.++.|..+|.+|+-...+
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~-G----~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD 297 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSED-G----EARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVD 297 (524)
T ss_pred CCcceEEecCCCCeEEEeecC-c----EEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCC
Confidence 357899999999999986643 2 7888898877766565666667889999999988765543
No 284
>PRK10749 lysophospholipase L2; Provisional
Probab=94.17 E-value=0.042 Score=61.96 Aligned_cols=53 Identities=13% Similarity=-0.060 Sum_probs=44.9
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
++..|+||+||++|.-||+..+.+++++++..+.. ....+++++|+.||.+..
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~----~~~~~l~~~~gagH~~~~ 309 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHP----CEGGKPLVIKGAYHEILF 309 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC----CCCceEEEeCCCcchhhh
Confidence 77899999999999999999999999999887641 113589999999998763
No 285
>PLN02578 hydrolase
Probab=94.15 E-value=0.16 Score=57.83 Aligned_cols=44 Identities=27% Similarity=0.200 Sum_probs=33.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+|+++|++|..||...+.++.+.+. ..++++. +.||.+-
T Consensus 294 ~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p-----------~a~l~~i-~~GH~~~ 337 (354)
T PLN02578 294 KLSCPLLLLWGDLDPWVGPAKAEKIKAFYP-----------DTTLVNL-QAGHCPH 337 (354)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------CCEEEEe-CCCCCcc
Confidence 678999999999999999988877755442 2245555 5899864
No 286
>PRK04940 hypothetical protein; Provisional
Probab=94.10 E-value=2.3 Score=42.75 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=35.1
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHH
Q psy1288 649 TLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYL 717 (1012)
Q Consensus 649 vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~ 717 (1012)
++++....|....+.++.+.+.. ...+.+.++|.|+|..- .+.+.++++|+.
T Consensus 127 ~~vllq~gDEvLDyr~a~~~y~~-------------~y~~~v~~GGdH~f~~f----e~~l~~I~~F~~ 178 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTAEELHP-------------YYEIVWDEEQTHKFKNI----SPHLQRIKAFKT 178 (180)
T ss_pred EEEEEeCCCcccCHHHHHHHhcc-------------CceEEEECCCCCCCCCH----HHHHHHHHHHHh
Confidence 67788888898888777654422 12367889999998642 234566677763
No 287
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=94.09 E-value=0.11 Score=56.55 Aligned_cols=44 Identities=14% Similarity=0.133 Sum_probs=31.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||++|++|. +++..+..+...+ - .++++++++.||...
T Consensus 229 ~i~~P~lii~G~~D~-~~~~~~~~~~~~~----~-------~~~~~~~~~~gH~~~ 272 (288)
T TIGR01250 229 EIKVPTLLTVGEFDT-MTPEAAREMQELI----A-------GSRLVVFPDGSHMTM 272 (288)
T ss_pred ccCCCEEEEecCCCc-cCHHHHHHHHHhc----c-------CCeEEEeCCCCCCcc
Confidence 677999999999996 6665544443222 1 346788999999754
No 288
>KOG0284|consensus
Probab=94.09 E-value=0.56 Score=51.54 Aligned_cols=187 Identities=13% Similarity=0.092 Sum_probs=96.6
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCC--ceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATG--KEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK 233 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg--~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~ 233 (1012)
...+..++|.|+||+|.-..+.+ .++|| +..+= |.. +......+..+.||++|.+++-....+
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SG---EFtLW--Ng~~fnFEti-lQaHDs~Vr~m~ws~~g~wmiSgD~gG--------- 160 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSG---EFTLW--NGTSFNFETI-LQAHDSPVRTMKWSHNGTWMISGDKGG--------- 160 (464)
T ss_pred ccceeeEEEcCCCceeEeecccc---cEEEe--cCceeeHHHH-hhhhcccceeEEEccCCCEEEEcCCCc---------
Confidence 45688999999999998776643 24555 22110 000 111122357799999998765332211
Q ss_pred CCceEEEEeeccc---------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEE
Q psy1288 234 KNRSSAYHLTVNV---------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATC 304 (1012)
Q Consensus 234 ~~~~l~~~~~~~~---------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~ 304 (1012)
-.-+++...|. +.|+...+||....|+--+++ ..|...|..-+.. -+.|..+. .+ ...+.+
T Consensus 161 --~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdD----g~ikiWdf~~~ke--e~vL~GHg-wd-VksvdW 230 (464)
T KOG0284|consen 161 --MIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDD----GTIKIWDFRMPKE--ERVLRGHG-WD-VKSVDW 230 (464)
T ss_pred --eEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCC----CeEEEEeccCCch--hheeccCC-CC-cceecc
Confidence 01112211110 233444588855544444432 2344444433331 12232222 22 233444
Q ss_pred ecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 305 VANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 305 ~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
-..+.++++...+. -+.+||..+|.-.-.+..-...|..+.|+++++.|+ +.+.. ..+-++|+
T Consensus 231 HP~kgLiasgskDn--lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Ll-t~skD---~~~kv~Di 293 (464)
T KOG0284|consen 231 HPTKGLIASGSKDN--LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLL-TGSKD---QSCKVFDI 293 (464)
T ss_pred CCccceeEEccCCc--eeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeE-EccCC---ceEEEEeh
Confidence 44466777666554 567889887765433333345677889999996544 33322 24566676
No 289
>PRK10673 acyl-CoA esterase; Provisional
Probab=94.08 E-value=0.16 Score=54.51 Aligned_cols=45 Identities=13% Similarity=0.054 Sum_probs=33.7
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+|+|+|++|..|+...++++...+ - -+.++++++.||...
T Consensus 193 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~----~-------~~~~~~~~~~gH~~~ 237 (255)
T PRK10673 193 AWPHPALFIRGGNSPYVTEAYRDDLLAQF----P-------QARAHVIAGAGHWVH 237 (255)
T ss_pred CCCCCeEEEECCCCCCCCHHHHHHHHHhC----C-------CcEEEEeCCCCCeee
Confidence 45699999999999999976665554332 1 356788999999753
No 290
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=94.05 E-value=0.071 Score=58.64 Aligned_cols=49 Identities=16% Similarity=0.129 Sum_probs=44.9
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHh-cCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKL-RDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
.-+.|++|.||.+|.-||+....++++.++++| . +|+|+.++..+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a-------~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGA-------DVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC-------CEEEEecCCCChhhh
Confidence 345999999999999999999999999999998 6 999999999999743
No 291
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=94.01 E-value=0.072 Score=60.99 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=33.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+||+||++|.-||+.++.+++ - .+.+.++++.||-..
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~~~l~-------~-------~~~~~~~~~~gH~~~ 353 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHAQGLP-------D-------GVAVHVLPGAGHMPQ 353 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHHhhcc-------C-------CCeEEEeCCCCCChh
Confidence 67799999999999999987765432 1 357788999999764
No 292
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=94.00 E-value=0.043 Score=53.15 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=37.0
Q ss_pred CCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 814 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
.+.|+|+++|++|.-||+.+..+++++++ . +.+++++++.+|+
T Consensus 103 ~~~pv~~i~g~~D~~~~~~~~~~~~~~~~---~-------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 103 IRIPVLFIHGENDPLVPPEQVRRLYEALP---G-------PKELYIIPGAGHF 145 (145)
T ss_dssp TTSEEEEEEETT-SSSHHHHHHHHHHHHC---S-------SEEEEEETTS-TT
T ss_pred cCCcEEEEEECCCCcCCHHHHHHHHHHcC---C-------CcEEEEeCCCcCc
Confidence 34799999999999999999999999998 3 8899999999995
No 293
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.99 E-value=8.6 Score=40.90 Aligned_cols=66 Identities=17% Similarity=0.150 Sum_probs=45.0
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece--eecceeeeeeEEeeCCCeEEEE
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE--VLHRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~--t~~~~~~~~~~WSpDG~~l~y~ 220 (1012)
+....+.-++||||++|.-+.+.....+-.|-|+|...+-.+.- ...+.+...+.|.+||+.++..
T Consensus 112 ~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva 179 (366)
T COG3490 112 GRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA 179 (366)
T ss_pred CceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEe
Confidence 44556778999999999777665444445788899875443321 1223334679999999988765
No 294
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=93.94 E-value=10 Score=40.44 Aligned_cols=197 Identities=12% Similarity=0.140 Sum_probs=89.1
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee-ceeecc-eeeeeeEEeeCCCeEEEEecCCCCCcc--c--C
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY-PEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSK--K--H 231 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~-~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~--~--~ 231 (1012)
.+++.+|.||.+.|+.+.+..+ .|+.++++ |+.+ ...+.+ ...-++++..+|+ ++.+..+....-. . .
T Consensus 23 e~SGLTy~pd~~tLfaV~d~~~----~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~-~vl~~Er~~~L~~~~~~~~ 96 (248)
T PF06977_consen 23 ELSGLTYNPDTGTLFAVQDEPG----EIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGR-YVLSEERDQRLYIFTIDDD 96 (248)
T ss_dssp -EEEEEEETTTTEEEEEETTTT----EEEEEETT---EEEEEE-SS-SSEEEEEE-STTE-EEEEETTTTEEEEEEE---
T ss_pred CccccEEcCCCCeEEEEECCCC----EEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCE-EEEEEcCCCcEEEEEEecc
Confidence 3899999999999877777644 78999986 4543 333433 2346678876664 3334332110000 0 0
Q ss_pred CCC-CceEEEEee-----ccccceeeeeeecCCCEEEEEECCCCCCceEEEEeC--CCCcccCcEEee--ccCC--Ccee
Q psy1288 232 SKK-NRSSAYHLT-----VNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDF--DNFAESNWKTLI--EENK--DDVL 299 (1012)
Q Consensus 232 ~~~-~~~l~~~~~-----~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl--~~~~~~~~~~l~--~~~~--~~~~ 299 (1012)
... ....+.+.. .+..+++-..|++.+++|++...+. ...|+.++. ...... ..... .... -.-+
T Consensus 97 ~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~--P~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ 173 (248)
T PF06977_consen 97 TTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERK--PKRLYEVNGFPGGFDLF-VSDDQDLDDDKLFVRDL 173 (248)
T ss_dssp -TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESS--SEEEEEEESTT-SS--E-EEE-HHHH-HT--SS--
T ss_pred ccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCC--ChhhEEEccccCcccee-eccccccccccceeccc
Confidence 000 000001101 0113455556899999999886543 356888876 211100 00000 0000 0012
Q ss_pred eeeEE-ecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCc---------eEEEeecccccCcEEEEEecCCCCCcEEE
Q psy1288 300 DWATC-VANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDV---------GTIVGFSGKKKYSEIFYSFMSFLQPTIIF 369 (1012)
Q Consensus 300 ~~~~~-~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~---------~~v~~~~~spdg~~l~~~~ss~~~p~~l~ 369 (1012)
..+.. ...+++++.+.. ...|..+|. +|+.+..+.+.. -...+++++++| .||++. +|...|
T Consensus 174 S~l~~~p~t~~lliLS~e--s~~l~~~d~-~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G-~LYIvs----EpNlfy 245 (248)
T PF06977_consen 174 SGLSYDPRTGHLLILSDE--SRLLLELDR-QGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDG-NLYIVS----EPNLFY 245 (248)
T ss_dssp -EEEEETTTTEEEEEETT--TTEEEEE-T-T--EEEEEE-STTGGG-SS---SEEEEEE-TT---EEEEE----TTTEEE
T ss_pred cceEEcCCCCeEEEEECC--CCeEEEECC-CCCEEEEEEeCCcccCcccccCCccEEEECCCC-CEEEEc----CCceEE
Confidence 22222 222466655433 245666675 566544444331 124567788876 566665 366666
Q ss_pred EE
Q psy1288 370 HC 371 (1012)
Q Consensus 370 ~~ 371 (1012)
++
T Consensus 246 ~f 247 (248)
T PF06977_consen 246 RF 247 (248)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 295
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=93.93 E-value=19 Score=46.20 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=57.5
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEe-CCCCceEEEcCCCCCCC-CCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEE--
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQD-SLDGEARVFLDPNNLSD-DGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFK-- 188 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~-~~~g~~~~L~D~n~la~-~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~-- 188 (1012)
...+.+|+....... ...|-+.. ..+.+.+.+.+...-.. .....+-++.+-+|...|.+.... | +|.++
T Consensus 31 ~~sd~i~~~~~~~~~-~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~-G----di~~~~~ 104 (928)
T PF04762_consen 31 SDSDSIYFVLGPNEI-DYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALAS-G----DIILVRE 104 (928)
T ss_pred cCCCeEEEEECCCCc-ceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECC-c----eEEEEEc
Confidence 445567776654321 12222221 11233456655432211 122356678888888877766553 3 57777
Q ss_pred --ECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 189 --DVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 189 --dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
+.++.+..-...-..+...++||||+..|++++..
T Consensus 105 ~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~ 141 (928)
T PF04762_consen 105 DPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGE 141 (928)
T ss_pred cCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCC
Confidence 54444432222223346789999999999998743
No 296
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=93.88 E-value=0.21 Score=58.78 Aligned_cols=114 Identities=14% Similarity=0.135 Sum_probs=64.8
Q ss_pred CceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc----------------ChhHHHHHHhCCeEEEEEcC-CCCCC
Q psy1288 413 GTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF----------------SVTKIVFLRDFNGIYAIPNI-RGGGE 475 (1012)
Q Consensus 413 G~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~----------------~~~~~~~l~~~G~~v~~~d~-RG~g~ 475 (1012)
+..+.+|++.... .....|++++++||++.+...++ ...-..|.. -..++.+|. +|.|
T Consensus 60 ~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l~iDqP~G~G- 134 (462)
T PTZ00472 60 DKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN--EAYVIYVDQPAGVG- 134 (462)
T ss_pred CceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc--ccCeEEEeCCCCcC-
Confidence 5678888887654 24568999999999876643211 001123443 234555564 5644
Q ss_pred CchhHHhhhhcCCCcchHhHHHHHHHHHHH-cCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 476 YGERWHDGGRLLNKQNVFDDFQCAAEYLIA-SGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 476 ~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
++..-.. ..........+|+...++.+.+ .+.....++.|+|+|+||..+..++..
T Consensus 135 ~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 135 FSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred cccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 3221100 0011112334566666654443 344556789999999999887666543
No 297
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=93.85 E-value=0.36 Score=53.29 Aligned_cols=82 Identities=23% Similarity=0.214 Sum_probs=55.8
Q ss_pred CeEEEEEcCCCCC-C-CchhHHhhh-h---cCCCcchHhHHHHHHHHHHHcCCCCCCcEE-EEecChHHHHHHHHHhhCC
Q psy1288 462 NGIYAIPNIRGGG-E-YGERWHDGG-R---LLNKQNVFDDFQCAAEYLIASGYTQSSRLA-IQGGSNGGLLTAACINQRP 534 (1012)
Q Consensus 462 G~~v~~~d~RG~g-~-~g~~~~~~~-~---~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p 534 (1012)
-|-|++.|.-|+. + .|..-.... + .....-++.|.+.+-+.|++.- .-+++. ++|+||||..++..+..+|
T Consensus 92 r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~L--GI~~l~avvGgSmGGMqaleWa~~yP 169 (368)
T COG2021 92 RFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDAL--GIKKLAAVVGGSMGGMQALEWAIRYP 169 (368)
T ss_pred ceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhc--CcceEeeeeccChHHHHHHHHHHhCh
Confidence 5899999998765 2 222211111 1 1223456788888887776652 235666 8999999999999999999
Q ss_pred CceeEEEEccC
Q psy1288 535 DLFGAAIVQVG 545 (1012)
Q Consensus 535 ~~f~a~v~~~~ 545 (1012)
++...++..+.
T Consensus 170 d~V~~~i~ia~ 180 (368)
T COG2021 170 DRVRRAIPIAT 180 (368)
T ss_pred HHHhhhheecc
Confidence 98877666655
No 298
>KOG2096|consensus
Probab=93.79 E-value=1.6 Score=46.60 Aligned_cols=71 Identities=23% Similarity=0.225 Sum_probs=45.3
Q ss_pred cCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCc---e--eceeecceeeeeeEEeeCCCeEEEE
Q psy1288 146 LDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGK---E--YPEVLHRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 146 ~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~---~--~~~t~~~~~~~~~~WSpDG~~l~y~ 220 (1012)
++.+.|.. +...+..+.||-|||++|-.... ..|++++++.=+ - .+...+-...+.++|+||-+.|++.
T Consensus 77 l~~~~LKg-H~~~vt~~~FsSdGK~lat~~~D-----r~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~ 150 (420)
T KOG2096|consen 77 LNVSVLKG-HKKEVTDVAFSSDGKKLATISGD-----RSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVS 150 (420)
T ss_pred hhhhhhhc-cCCceeeeEEcCCCceeEEEeCC-----ceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEE
Confidence 34444432 23468899999999999866543 268888876421 1 1222322234678999999988876
Q ss_pred ec
Q psy1288 221 NQ 222 (1012)
Q Consensus 221 ~~ 222 (1012)
-.
T Consensus 151 ~~ 152 (420)
T KOG2096|consen 151 VK 152 (420)
T ss_pred Ec
Confidence 54
No 299
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=93.78 E-value=0.14 Score=61.99 Aligned_cols=43 Identities=12% Similarity=0.003 Sum_probs=32.3
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
++..|+|+++|=.| ....++...|.++++.+ +..+++=|. +|+
T Consensus 230 ~i~vP~l~~~gw~D--~~~~g~~~~~~~~~~~~--------~~~lilGpw-~H~ 272 (550)
T TIGR00976 230 GSDVPTLVTGGWYD--NHSRGSIRLFLAVHRGG--------AQRLVVGPW-THS 272 (550)
T ss_pred CCCCCEEEeCcccC--CCCchHHHHHHHHhhcC--------CceEEEccC-CCC
Confidence 78899999999999 36678888898888752 456666443 354
No 300
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=93.73 E-value=0.077 Score=59.30 Aligned_cols=112 Identities=10% Similarity=0.041 Sum_probs=59.6
Q ss_pred CCCCcEEEEEcCCCCCCCCCCcChhHH-HHHHh--CCeEEEEEcCCCCCCCchhHHhhhhcCCCcchH-hHHHHHHHHHH
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGFSVTKI-VFLRD--FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVF-DDFQCAAEYLI 504 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~~~~~~-~~l~~--~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~-~D~~a~~~~l~ 504 (1012)
+...|+++++||-........|..... .++.. ..+.|+++|....... .+..+... ...+ .-+...+..|.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n---~~~vg~~la~~l~~L~ 142 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN---TRLVGRQLAKFLSFLI 142 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh---HHHHHHHHHHHHHHHH
Confidence 456799999999755542334433333 34554 4799999998632211 11111100 0011 12233356666
Q ss_pred HcCCCCCCcEEEEecChHHHHHHHHHhhCCC--ceeEEEEccC
Q psy1288 505 ASGYTQSSRLAIQGGSNGGLLTAACINQRPD--LFGAAIVQVG 545 (1012)
Q Consensus 505 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~~~ 545 (1012)
....+++++|-++|||.|+++++.+...... .+..+...-|
T Consensus 143 ~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 143 NNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 5556789999999999999999988877655 4555555544
No 301
>PLN00021 chlorophyllase
Probab=93.62 E-value=0.46 Score=52.84 Aligned_cols=44 Identities=11% Similarity=0.082 Sum_probs=32.9
Q ss_pred CCCceEEEcccCCC-----C----CCCcch-HHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 814 QYPATLLMTADHDD-----R----VSPVHS-LKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~-----r----v~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
+..|+||+++..|. . .|.... .+||.+++. |..+++-++.||--
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~----------~~~~~~~~~~gH~~ 241 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKA----------PAVHFVAKDYGHMD 241 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCC----------CeeeeeecCCCcce
Confidence 44999999999873 2 335444 788877765 77888888999963
No 302
>PRK11071 esterase YqiA; Provisional
Probab=93.56 E-value=0.2 Score=51.44 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=34.9
Q ss_pred CCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 814 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
...|++|+||.+|.-||..+|.++|++. .+++.++.+|.+...
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~--------------~~~~~~ggdH~f~~~ 177 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC--------------RQTVEEGGNHAFVGF 177 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc--------------ceEEECCCCcchhhH
Confidence 3378899999999999999999999943 223569999999654
No 303
>KOG2394|consensus
Probab=93.55 E-value=0.074 Score=60.05 Aligned_cols=59 Identities=24% Similarity=0.336 Sum_probs=41.7
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec-ceeeeeeEEeeCCCeEEEEe
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH-RLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~-~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.+..+.+||||++||-+..+ | -|+|+|.++.+.+-.... -++.--++||||||+|+--.
T Consensus 292 ~in~f~FS~DG~~LA~VSqD-G----fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQD-G----FLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred cccceeEcCCCceEEEEecC-c----eEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecC
Confidence 56789999999999976543 3 789999887765432111 12235589999999887543
No 304
>KOG1274|consensus
Probab=93.54 E-value=1.7 Score=52.76 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=67.9
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec---ee------ecceeeeeeEEeeCCCeEEEEecCCCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP---EV------LHRLKFVSIAWTHDHKGVFYSNQEPKS 226 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~---~t------~~~~~~~~~~WSpDG~~l~y~~~~~~~ 226 (1012)
...+..+.++|.|+.||-+.-. | .++++|++++.... .. ........++|+|||..|++...+..
T Consensus 138 ~apVl~l~~~p~~~fLAvss~d-G----~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~- 211 (933)
T KOG1274|consen 138 DAPVLQLSYDPKGNFLAVSSCD-G----KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT- 211 (933)
T ss_pred CCceeeeeEcCCCCEEEEEecC-c----eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe-
Confidence 4567889999999999976543 3 78999999887431 11 11112467999999888877754321
Q ss_pred CcccCCCCCceEEEEee---------c--cccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCC
Q psy1288 227 KSKKHSKKNRSSAYHLT---------V--NVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDN 281 (1012)
Q Consensus 227 ~g~~~~~~~~~l~~~~~---------~--~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~ 281 (1012)
..+|... . ....+.+..|||.|++|+-.+- +.+|...|.++
T Consensus 212 ----------Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~----~g~I~vWnv~t 263 (933)
T KOG1274|consen 212 ----------VKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTL----DGQILVWNVDT 263 (933)
T ss_pred ----------EEEEccCCceeheeecccccccceEEEEEcCCCcEEeeecc----CCcEEEEeccc
Confidence 1111110 0 0123455679999999988763 45677777764
No 305
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=93.38 E-value=1.3 Score=47.76 Aligned_cols=61 Identities=16% Similarity=0.280 Sum_probs=39.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC---CCceece----eec---ceeeeeeEEeeCCCeEEEEe
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA---TGKEYPE----VLH---RLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~---tg~~~~~----t~~---~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.+..+++||||.+||+.+...+.. +|++--+. .|....+ ... ......+.|++|++ |+...
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~--~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~-L~V~~ 183 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGG--RVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST-LVVLG 183 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCC--eEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE-EEEEe
Confidence 789999999999999999877664 55555432 3311111 111 12346899999886 55554
No 306
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=93.28 E-value=0.11 Score=47.42 Aligned_cols=43 Identities=26% Similarity=0.234 Sum_probs=37.0
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
..|+||+++++|+.+|..-++.+.++|.. ..+++..+.|||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-----------s~lvt~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-----------SRLVTVDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-----------ceEEEEeccCccee
Confidence 49999999999999999999998777653 36778889999975
No 307
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=93.28 E-value=0.16 Score=58.89 Aligned_cols=45 Identities=16% Similarity=-0.065 Sum_probs=32.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+|+++|++|.-+ +.++.++... .+. ++++++.++.||..-
T Consensus 323 ~I~vP~liI~G~~D~i~-~~~~~~~~~~---~~~-------~~~~~~i~~aGH~~~ 367 (402)
T PLN02894 323 EWKVPTTFIYGRHDWMN-YEGAVEARKR---MKV-------PCEIIRVPQGGHFVF 367 (402)
T ss_pred cCCCCEEEEEeCCCCCC-cHHHHHHHHH---cCC-------CCcEEEeCCCCCeee
Confidence 67899999999999644 4444444322 233 678999999999754
No 308
>KOG0263|consensus
Probab=93.25 E-value=0.88 Score=54.10 Aligned_cols=89 Identities=18% Similarity=0.252 Sum_probs=58.0
Q ss_pred EEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec
Q psy1288 118 YFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP 197 (1012)
Q Consensus 118 ~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~ 197 (1012)
+||.. .+.+..+.||..+.. ...|++.. +...+..+.+.|+..++|= |+...++++||+-+|..++
T Consensus 506 yYFat-as~D~tArLWs~d~~-~PlRifag-------hlsDV~cv~FHPNs~Y~aT-----GSsD~tVRlWDv~~G~~VR 571 (707)
T KOG0263|consen 506 YYFAT-ASHDQTARLWSTDHN-KPLRIFAG-------HLSDVDCVSFHPNSNYVAT-----GSSDRTVRLWDVSTGNSVR 571 (707)
T ss_pred eEEEe-cCCCceeeeeecccC-Cchhhhcc-------cccccceEEECCccccccc-----CCCCceEEEEEcCCCcEEE
Confidence 34443 345567788876652 22333332 2235667899999988874 3444689999999988765
Q ss_pred ee-ecceeeeeeEEeeCCCeEEEE
Q psy1288 198 EV-LHRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 198 ~t-~~~~~~~~~~WSpDG~~l~y~ 220 (1012)
.- -+......+++||+|++|+-.
T Consensus 572 iF~GH~~~V~al~~Sp~Gr~LaSg 595 (707)
T KOG0263|consen 572 IFTGHKGPVTALAFSPCGRYLASG 595 (707)
T ss_pred EecCCCCceEEEEEcCCCceEeec
Confidence 43 333446889999999977643
No 309
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.01 E-value=0.1 Score=50.38 Aligned_cols=49 Identities=24% Similarity=0.419 Sum_probs=39.5
Q ss_pred HHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCc
Q psy1288 500 AEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCG 553 (1012)
Q Consensus 500 ~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~ 553 (1012)
-.|++++.. |.+..+.|.|+||+.++....++|++|..+|+.+| ++|.+
T Consensus 91 erYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSG---vYdar 139 (227)
T COG4947 91 ERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSG---VYDAR 139 (227)
T ss_pred HHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecc---eeeHH
Confidence 356666533 45567789999999999999999999999999999 66643
No 310
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=92.99 E-value=0.07 Score=55.86 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=34.4
Q ss_pred CCCCceEEEcccCCCCCCCcc-hHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVH-SLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
+|+.|+|+++|++|--.|-.+ ++++.+.|++.|-+. +++++.||++||-+.-|
T Consensus 113 ~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~-----~~~~l~Y~~aGH~i~~P 166 (213)
T PF08840_consen 113 KIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPH-----NVEHLSYPGAGHLIEPP 166 (213)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT----------EEEEETTB-S---ST
T ss_pred HcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCC-----cceEEEcCCCCceecCC
Confidence 555999999999999999764 557778899887622 68999999999988755
No 311
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=92.93 E-value=0.29 Score=52.48 Aligned_cols=46 Identities=24% Similarity=0.252 Sum_probs=35.6
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+..+=+|...++.+..+++.+ ++++.|+++|+ |..|..|++ ||-..
T Consensus 237 ~~~~~~l~~g~~~~~~~~pNr--~L~~~L~~~g~-------~~~yre~~G-gHdw~ 282 (299)
T COG2382 237 TDERIVLTTGGEEGDFLRPNR--ALAAQLEKKGI-------PYYYREYPG-GHDWA 282 (299)
T ss_pred ccceEEeecCCccccccchhH--HHHHHHHhcCC-------cceeeecCC-CCchh
Confidence 444666777777777777665 57799999999 999999999 99543
No 312
>KOG0263|consensus
Probab=92.92 E-value=4 Score=48.79 Aligned_cols=187 Identities=12% Similarity=0.054 Sum_probs=95.9
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
.+-+.++|||-++|+ +.+. ...+++|.+++......-.++ .....+.|+|-| +||.+.-.. ...
T Consensus 453 PVyg~sFsPd~rfLl-ScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G--yYFatas~D--------~tA 517 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLL-SCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG--YYFATASHD--------QTA 517 (707)
T ss_pred ceeeeeeccccccee-eccC----CcceeeeecccceeEEEecCCCcceeeEEecCCc--eEEEecCCC--------cee
Confidence 456889999998875 3332 346667777665543322222 223557788876 556543110 112
Q ss_pred eEEEEeec--------cccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCC
Q psy1288 237 SSAYHLTV--------NVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVAND 308 (1012)
Q Consensus 237 ~l~~~~~~--------~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 308 (1012)
+++-.... ...++....+.|....++ +. .....+-..|+.++. ..+++......+..-...+.|+
T Consensus 518 rLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~a--TG--SsD~tVRlWDv~~G~---~VRiF~GH~~~V~al~~Sp~Gr 590 (707)
T KOG0263|consen 518 RLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVA--TG--SSDRTVRLWDVSTGN---SVRIFTGHKGPVTALAFSPCGR 590 (707)
T ss_pred eeeecccCCchhhhcccccccceEEECCcccccc--cC--CCCceEEEEEcCCCc---EEEEecCCCCceEEEEEcCCCc
Confidence 22221110 002233333556544332 21 112233344555554 3566655544444433444544
Q ss_pred EEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 309 KLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+|+-. .+ ...|.+||+.+|+....+-...+.+..+++|.||+.|+..... .+|-++|+
T Consensus 591 ~LaSg-~e--d~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~D----nsV~lWD~ 648 (707)
T KOG0263|consen 591 YLASG-DE--DGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGAD----NSVRLWDL 648 (707)
T ss_pred eEeec-cc--CCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCC----CeEEEEEc
Confidence 44332 22 3568889998777654444446677788999999876643322 23555576
No 313
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=92.89 E-value=0.24 Score=52.17 Aligned_cols=44 Identities=23% Similarity=0.305 Sum_probs=31.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+||++|++|..++ +..+.+++..- .+.++++|+.||...
T Consensus 192 ~~~~P~l~i~g~~D~~~~-----~~~~~~~~~~~-------~~~~~~~~~~gH~~~ 235 (251)
T TIGR03695 192 ALTIPVLYLCGEKDEKFV-----QIAKEMQKLLP-------NLTLVIIANAGHNIH 235 (251)
T ss_pred CCCCceEEEeeCcchHHH-----HHHHHHHhcCC-------CCcEEEEcCCCCCcC
Confidence 677999999999997653 22333444322 568888999999764
No 314
>KOG1455|consensus
Probab=92.86 E-value=0.35 Score=51.78 Aligned_cols=47 Identities=11% Similarity=0.054 Sum_probs=41.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++.-|.||+||+.|.-+.+.-|.++|+....+-. .+.+||+.-|+..
T Consensus 244 ~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DK---------TlKlYpGm~H~Ll 290 (313)
T KOG1455|consen 244 EVTVPFLILHGTDDKVTDPKVSKELYEKASSSDK---------TLKLYPGMWHSLL 290 (313)
T ss_pred cccccEEEEecCCCcccCcHHHHHHHHhccCCCC---------ceeccccHHHHhh
Confidence 6779999999999999999999999998777633 6789999999975
No 315
>KOG0772|consensus
Probab=92.73 E-value=1.9 Score=48.85 Aligned_cols=206 Identities=13% Similarity=0.056 Sum_probs=104.7
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce-----ece-eecceeeeeeEEeeCCCeEEEEecCCCCCc
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE-----YPE-VLHRLKFVSIAWTHDHKGVFYSNQEPKSKS 228 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~-----~~~-t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g 228 (1012)
|...++..++-|.|-+++ .|+-.+++..||..+=.. +++ ..+...+.+.+||+-|..|+.++......-
T Consensus 166 gtk~Vsal~~Dp~GaR~~-----sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl 240 (641)
T KOG0772|consen 166 GTKIVSALAVDPSGARFV-----SGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKL 240 (641)
T ss_pred CceEEEEeeecCCCceee-----eccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeE
Confidence 556788999999998886 356678999999876432 121 112223578999999999988863321000
Q ss_pred ccCCCCCceEEEEe-------eccc----cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCc
Q psy1288 229 KKHSKKNRSSAYHL-------TVNV----APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDD 297 (1012)
Q Consensus 229 ~~~~~~~~~l~~~~-------~~~~----~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~ 297 (1012)
.+......+-+.. ..|. ..+....|.|+.+..++.+..++ ..+|+-++-........+.........
T Consensus 241 -~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dg-tlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 241 -LDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDG-TLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred -EccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCC-cEEEEecCCchhheeEEeeccCCCccc
Confidence 0000000000000 0111 22345569999998888886554 344554432221111111111222222
Q ss_pred eeeeeEEecCCEEEEEEEcCceEEEEEEecCCCcee------eeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEE
Q psy1288 298 VLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHL------YTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHC 371 (1012)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~------~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~ 371 (1012)
....-.+..++.++...-.+|.-++| +. .+... +.-..+...++.++||+||+.|+- .++.+ .|-++
T Consensus 319 ~~tsC~~nrdg~~iAagc~DGSIQ~W--~~-~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS--Rg~D~--tLKvW 391 (641)
T KOG0772|consen 319 PVTSCAWNRDGKLIAAGCLDGSIQIW--DK-GSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS--RGFDD--TLKVW 391 (641)
T ss_pred CceeeecCCCcchhhhcccCCceeee--ec-CCcccccceEeeeccCCCCceeEEEeccccchhhh--ccCCC--ceeee
Confidence 23333333334455555556554544 43 12111 111223346778899999987652 22222 35566
Q ss_pred eCC
Q psy1288 372 NIP 374 (1012)
Q Consensus 372 d~~ 374 (1012)
|+.
T Consensus 392 DLr 394 (641)
T KOG0772|consen 392 DLR 394 (641)
T ss_pred ecc
Confidence 663
No 316
>KOG4391|consensus
Probab=92.68 E-value=0.76 Score=46.49 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=38.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
+.+.|.|++.|..|--||+.+-.|+|...-.+.. ++..||+..|-
T Consensus 219 ~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K---------rl~eFP~gtHN 263 (300)
T KOG4391|consen 219 QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTK---------RLAEFPDGTHN 263 (300)
T ss_pred cccCceEEeecCccccCCcHHHHHHHHhCchhhh---------hheeCCCCccC
Confidence 5569999999999999999999999998877643 67789998883
No 317
>KOG0296|consensus
Probab=92.68 E-value=13 Score=40.69 Aligned_cols=162 Identities=12% Similarity=0.064 Sum_probs=90.5
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCC---CcccC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKS---KSKKH 231 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~---~g~~~ 231 (1012)
...+..++++|+.+++|= |++.-.-|+++..+|+..- ++-...+.....||.||..|+-....+.. ..+ .
T Consensus 64 ~~svFavsl~P~~~l~aT-----GGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~s-t 137 (399)
T KOG0296|consen 64 TDSVFAVSLHPNNNLVAT-----GGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVS-T 137 (399)
T ss_pred CCceEEEEeCCCCceEEe-----cCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcc-c
Confidence 446778899997666652 2223367888998998532 33333456889999999755432221110 000 0
Q ss_pred CCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEE
Q psy1288 232 SKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLI 311 (1012)
Q Consensus 232 ~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 311 (1012)
+.....+. ....++++-.|.|.+..|+.-++ ...++...+.+.. ...++..........-..++|++++
T Consensus 138 g~~~~~~~----~e~~dieWl~WHp~a~illAG~~----DGsvWmw~ip~~~---~~kv~~Gh~~~ct~G~f~pdGKr~~ 206 (399)
T KOG0296|consen 138 GGEQWKLD----QEVEDIEWLKWHPRAHILLAGST----DGSVWMWQIPSQA---LCKVMSGHNSPCTCGEFIPDGKRIL 206 (399)
T ss_pred CceEEEee----cccCceEEEEecccccEEEeecC----CCcEEEEECCCcc---eeeEecCCCCCcccccccCCCceEE
Confidence 00000110 01145566668887776666654 3456776665532 2445554433333333455667776
Q ss_pred EEEEcCceEEEEEEecCCCceeeeec
Q psy1288 312 LSYIHHVKNVMHLHDLASGKHLYTFP 337 (1012)
Q Consensus 312 ~~~~~~g~~~l~~~dl~~G~~~~~l~ 337 (1012)
..+.+ ..|.+|++.+|.+.-.+.
T Consensus 207 tgy~d---gti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 207 TGYDD---GTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred EEecC---ceEEEEecCCCceeEEec
Confidence 66653 468889998887655544
No 318
>PLN00181 protein SPA1-RELATED; Provisional
Probab=92.65 E-value=14 Score=47.09 Aligned_cols=195 Identities=16% Similarity=0.130 Sum_probs=92.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee-cceeeeeeEEee-CCCeEEEEecCCCCCcccCCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL-HRLKFVSIAWTH-DHKGVFYSNQEPKSKSKKHSKKN 235 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~-~~~~~~~~~WSp-DG~~l~y~~~~~~~~g~~~~~~~ 235 (1012)
.+....|+|..+..+.+.+.+| .|.++|+.+++...... .......+.|+| |+..|+-.+.+....-. +....
T Consensus 534 ~v~~l~~~~~~~~~las~~~Dg----~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iW-d~~~~ 608 (793)
T PLN00181 534 KLSGICWNSYIKSQVASSNFEG----VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW-SINQG 608 (793)
T ss_pred ceeeEEeccCCCCEEEEEeCCC----eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEE-ECCCC
Confidence 4567889876433344444444 79999999887654222 223457899997 66655444433210000 00000
Q ss_pred ceEEEEeeccccceeeeee-ecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEE
Q psy1288 236 RSSAYHLTVNVAPITSQYI-TNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSY 314 (1012)
Q Consensus 236 ~~l~~~~~~~~~~i~~~~~-s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 314 (1012)
. .+.... ....+....| +++|..|+..+. +..+...|+..... ....+..+. ..+..+.+.+++.++ +.
T Consensus 609 ~-~~~~~~-~~~~v~~v~~~~~~g~~latgs~----dg~I~iwD~~~~~~-~~~~~~~h~--~~V~~v~f~~~~~lv-s~ 678 (793)
T PLN00181 609 V-SIGTIK-TKANICCVQFPSESGRSLAFGSA----DHKVYYYDLRNPKL-PLCTMIGHS--KTVSYVRFVDSSTLV-SS 678 (793)
T ss_pred c-EEEEEe-cCCCeEEEEEeCCCCCEEEEEeC----CCeEEEEECCCCCc-cceEecCCC--CCEEEEEEeCCCEEE-EE
Confidence 0 000000 0012222234 345666665542 34677788765431 112222222 223344444544444 33
Q ss_pred EcCceEEEEEEecCCC------ceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 315 IHHVKNVMHLHDLASG------KHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 315 ~~~g~~~l~~~dl~~G------~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..+ ..|.+|++..+ +....+......+..+.+++++..|+.... -..+++++.
T Consensus 679 s~D--~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~----D~~v~iw~~ 737 (793)
T PLN00181 679 STD--NTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE----TNEVFVYHK 737 (793)
T ss_pred ECC--CEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC----CCEEEEEEC
Confidence 333 35777887432 222233322233445667888775544332 235777776
No 319
>KOG0650|consensus
Probab=92.60 E-value=3 Score=48.23 Aligned_cols=191 Identities=14% Similarity=0.089 Sum_probs=99.3
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCe-EEEEecCCC------CCc
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKG-VFYSNQEPK------SKS 228 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~-l~y~~~~~~------~~g 228 (1012)
...+..+++.|-|.+||=+. +.-.++||.++||.-+....-...+..++|.|.++. |+-++.... ..|
T Consensus 400 tg~Vr~iSvdp~G~wlasGs-----dDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G 474 (733)
T KOG0650|consen 400 TGLVRSISVDPSGEWLASGS-----DDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFG 474 (733)
T ss_pred CCeEEEEEecCCcceeeecC-----CCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCcccc
Confidence 34677889999999998543 334788899999986554333444678999998864 222221111 111
Q ss_pred c-cC--------------CCCCce-EEEEee-cc-c-----------cceeeeeeecCCCEEEEEECCCCCCceEEEEeC
Q psy1288 229 K-KH--------------SKKNRS-SAYHLT-VN-V-----------APITSQYITNEGPQFVFKTNKDAPNYRLITIDF 279 (1012)
Q Consensus 229 ~-~~--------------~~~~~~-l~~~~~-~~-~-----------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl 279 (1012)
. .. ...+.+ +.+... .. . ..+....|.-+|++|..++..+. +..++.-.+
T Consensus 475 ~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~-~~~VliHQL 553 (733)
T KOG0650|consen 475 DRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSG-NKSVLIHQL 553 (733)
T ss_pred chhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCC-cceEEEEec
Confidence 1 00 000000 111111 00 0 12223348889999988886543 445666666
Q ss_pred CCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEe
Q psy1288 280 DNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSF 359 (1012)
Q Consensus 280 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ 359 (1012)
..... ...+....+.+.....-+-...++++.. ..+.+|++..++..+.+-...-.++.++.+|.|+.|++..
T Consensus 554 SK~~s---Q~PF~kskG~vq~v~FHPs~p~lfVaTq----~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~gs 626 (733)
T KOG0650|consen 554 SKRKS---QSPFRKSKGLVQRVKFHPSKPYLFVATQ----RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILGS 626 (733)
T ss_pred ccccc---cCchhhcCCceeEEEecCCCceEEEEec----cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEec
Confidence 54321 1111112222222111111134555432 4578889855443333332345577888899998877654
No 320
>KOG1524|consensus
Probab=92.57 E-value=3.9 Score=46.68 Aligned_cols=91 Identities=16% Similarity=0.218 Sum_probs=52.2
Q ss_pred CCCCeeEEEEEeCCCCceEEEcCCCCCCC----CCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-ee
Q psy1288 125 GLQNHSVMYIQDSLDGEARVFLDPNNLSD----DGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EV 199 (1012)
Q Consensus 125 ~~~~~~~l~~~~~~~g~~~~L~D~n~la~----~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t 199 (1012)
+++.+...+.....+|.-. ++.-+..-+ .+...+...+|||||.-++ ++.++| .|-++. .+|-.+. +.
T Consensus 70 ~~g~~~d~~~i~s~DGkf~-il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLl-t~GEDG----~iKiWS-rsGMLRStl~ 142 (737)
T KOG1524|consen 70 GGGKGSDTLLICSNDGRFV-ILNKSARVERSISAHAAAISSGRWSPDGAGLL-TAGEDG----VIKIWS-RSGMLRSTVV 142 (737)
T ss_pred CCCCCcceEEEEcCCceEE-EecccchhhhhhhhhhhhhhhcccCCCCceee-eecCCc----eEEEEe-ccchHHHHHh
Confidence 3344556666655555533 333222111 0224567889999998765 333333 555555 3555433 22
Q ss_pred ecceeeeeeEEeeCCCeEEEEec
Q psy1288 200 LHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 200 ~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
........++|.||+..++|...
T Consensus 143 Q~~~~v~c~~W~p~S~~vl~c~g 165 (737)
T KOG1524|consen 143 QNEESIRCARWAPNSNSIVFCQG 165 (737)
T ss_pred hcCceeEEEEECCCCCceEEecC
Confidence 23344578999999999999863
No 321
>KOG1446|consensus
Probab=92.47 E-value=18 Score=38.98 Aligned_cols=195 Identities=16% Similarity=0.181 Sum_probs=99.3
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceecee-ecceeeeeeEEeeCCCeEEEEecCCCC-CcccCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEV-LHRLKFVSIAWTHDHKGVFYSNQEPKS-KSKKHSKK 234 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t-~~~~~~~~~~WSpDG~~l~y~~~~~~~-~g~~~~~~ 234 (1012)
..+.++.+|+||..++-.... + .|.++|..+|+..... ...-+..-+.+......+.+.+..... ........
T Consensus 15 ~~i~sl~fs~~G~~litss~d-D----sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSED-D----SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred CceeEEEecCCCCEEEEecCC-C----eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence 357889999999999863332 1 7899999988865422 222234556777777777777642100 00000001
Q ss_pred CceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEE
Q psy1288 235 NRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSY 314 (1012)
Q Consensus 235 ~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~ 314 (1012)
+..+-|-. .-...+.....+|-++.++=.+.+ ..+...|+.... ..-++.-. ... +...|...|++..
T Consensus 90 NkylRYF~-GH~~~V~sL~~sP~~d~FlS~S~D----~tvrLWDlR~~~---cqg~l~~~-~~p---i~AfDp~GLifA~ 157 (311)
T KOG1446|consen 90 NKYLRYFP-GHKKRVNSLSVSPKDDTFLSSSLD----KTVRLWDLRVKK---CQGLLNLS-GRP---IAAFDPEGLIFAL 157 (311)
T ss_pred CceEEEcC-CCCceEEEEEecCCCCeEEecccC----CeEEeeEecCCC---CceEEecC-CCc---ceeECCCCcEEEE
Confidence 11111100 000122223356666544433322 234455554332 12222211 111 1223335555555
Q ss_pred EcCceEEEEEEecCC--CceeeeecCC---ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 315 IHHVKNVMHLHDLAS--GKHLYTFPLD---VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 315 ~~~g~~~l~~~dl~~--G~~~~~l~~~---~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..++. .|.+||+.. +.+-..+..+ ......+.+|+||+.|.++.+. ..++++|.
T Consensus 158 ~~~~~-~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~----s~~~~lDA 216 (311)
T KOG1446|consen 158 ANGSE-LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA----SFIYLLDA 216 (311)
T ss_pred ecCCC-eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC----CcEEEEEc
Confidence 44443 677777742 2222333322 3345678899999999988754 45888886
No 322
>KOG2139|consensus
Probab=92.37 E-value=0.49 Score=51.21 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=59.9
Q ss_pred CeeeCCEEEEEEEcCCCCeeEEE-EEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCC-----------
Q psy1288 111 PQRQGDHYFFFHNTGLQNHSVMY-IQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSS----------- 178 (1012)
Q Consensus 111 p~~dG~~~yy~~~~~~~~~~~l~-~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~----------- 178 (1012)
++|||+++|-.+-++ ...|| .......+..++.. .++....|||+|++|+|+....
T Consensus 246 wSPdgd~lfaAt~da---vfrlw~e~q~wt~erw~lgs---------grvqtacWspcGsfLLf~~sgsp~lysl~f~~~ 313 (445)
T KOG2139|consen 246 WSPDGDVLFAATCDA---VFRLWQENQSWTKERWILGS---------GRVQTACWSPCGSFLLFACSGSPRLYSLTFDGE 313 (445)
T ss_pred EcCCCCEEEEecccc---eeeeehhcccceecceeccC---------CceeeeeecCCCCEEEEEEcCCceEEEEeecCC
Confidence 469999888766544 46777 33333333333322 3788899999999999988643
Q ss_pred -------CCceEEEEEEECC-----CCceeceeecceeeeeeEEeeCCCeEEEEec
Q psy1288 179 -------GSDWTSMHFKDVA-----TGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 179 -------G~~~~~L~v~dl~-----tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
++.+..+-++||. +|+ +.-.+....++|.|-|.+++.+-+
T Consensus 314 ~~~~~~~~~~k~~lliaDL~e~ti~ag~----~l~cgeaq~lawDpsGeyLav~fK 365 (445)
T KOG2139|consen 314 DSVFLRPQSIKRVLLIADLQEVTICAGQ----RLCCGEAQCLAWDPSGEYLAVIFK 365 (445)
T ss_pred CccccCcccceeeeeeccchhhhhhcCc----ccccCccceeeECCCCCEEEEEEc
Confidence 1233445555542 221 111223467899999999988754
No 323
>KOG1063|consensus
Probab=92.36 E-value=7.1 Score=46.16 Aligned_cols=68 Identities=15% Similarity=0.148 Sum_probs=50.8
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
.+-+...+.||+|+.||=.....-.+...|++++..+=...+ +....-....+.|||||++|+-++.+
T Consensus 525 GyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRD 593 (764)
T KOG1063|consen 525 GYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRD 593 (764)
T ss_pred ceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecC
Confidence 467889999999999997766666677899999976543322 22333345789999999998877654
No 324
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=92.33 E-value=0.036 Score=62.52 Aligned_cols=171 Identities=17% Similarity=0.087 Sum_probs=79.7
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCcc-ccchhhhhHHHHHHHHhCC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT-TKQFPLTIPVIYFYLTSGP 721 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~-~~~~~~~~~~~~fl~~~l~ 721 (1012)
..++| ++|+.|+-|..-. .....+...+... |.-++..--|+-|+...... .+.-.....+++||...
T Consensus 187 ~~p~P-~VIv~gGlDs~qe-D~~~l~~~~l~~r-------GiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~-- 255 (411)
T PF06500_consen 187 EKPYP-TVIVCGGLDSLQE-DLYRLFRDYLAPR-------GIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASR-- 255 (411)
T ss_dssp SS-EE-EEEEE--TTS-GG-GGHHHHHCCCHHC-------T-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHS--
T ss_pred CCCCC-EEEEeCCcchhHH-HHHHHHHHHHHhC-------CCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcC--
Confidence 35677 7777888775422 1122222334444 66667777788777532111 12224456777888765
Q ss_pred CCCCCCCCCCCc--cCCccccccCccceeee-ccccccccchhh------hcccccCCCCCCCCCC------CcccCCCC
Q psy1288 722 VLQRYPETPNKA--DGSENVRNQDQKLYYHY-LGTDQKDDILIA------EVLDMLKFNKFTIGYF------WESDYGSP 786 (1012)
Q Consensus 722 ~~~~~~d~~~~~--GgS~g~~~~~~~~~~~~-~~~t~~~~~~~~------~~~~~~~~~~~~~~~~------~~~~~g~~ 786 (1012)
...|..+++ |-|.| +|.+. ++++ .++++++ +|-++++-...-...+ +...+|-.
T Consensus 256 ---p~VD~~RV~~~G~SfG-------Gy~AvRlA~l-e~~RlkavV~~Ga~vh~~ft~~~~~~~~P~my~d~LA~rlG~~ 324 (411)
T PF06500_consen 256 ---PWVDHTRVGAWGFSFG-------GYYAVRLAAL-EDPRLKAVVALGAPVHHFFTDPEWQQRVPDMYLDVLASRLGMA 324 (411)
T ss_dssp ---TTEEEEEEEEEEETHH-------HHHHHHHHHH-TTTT-SEEEEES---SCGGH-HHHHTTS-HHHHHHHHHHCT-S
T ss_pred ---CccChhheEEEEeccc-------hHHHHHHHHh-cccceeeEeeeCchHhhhhccHHHHhcCCHHHHHHHHHHhCCc
Confidence 456777887 66766 44332 1211 1222322 3444433110000000 11234544
Q ss_pred --CChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHH
Q psy1288 787 --ANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFA 838 (1012)
Q Consensus 787 --~~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~ 838 (1012)
++..-...+..+|-...-- -...+..+|+|.+.+++|+-+|..++..++
T Consensus 325 ~~~~~~l~~el~~~SLk~qGl---L~~rr~~~plL~i~~~~D~v~P~eD~~lia 375 (411)
T PF06500_consen 325 AVSDESLRGELNKFSLKTQGL---LSGRRCPTPLLAINGEDDPVSPIEDSRLIA 375 (411)
T ss_dssp CE-HHHHHHHGGGGSTTTTTT---TTSS-BSS-EEEEEETT-SSS-HHHHHHHH
T ss_pred cCCHHHHHHHHHhcCcchhcc---ccCCCCCcceEEeecCCCCCCCHHHHHHHH
Confidence 2222245567778764311 001378899999999999999988876653
No 325
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=92.24 E-value=0.11 Score=59.95 Aligned_cols=48 Identities=10% Similarity=-0.004 Sum_probs=40.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
++..|+||+||++|.-||+.++.++|+.+... ...+.++++.+|....
T Consensus 322 ~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~---------~k~l~~~~ga~H~l~~ 369 (395)
T PLN02652 322 SVTVPFMVLHGTADRVTDPLASQDLYNEAASR---------HKDIKLYDGFLHDLLF 369 (395)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCC---------CceEEEECCCeEEecc
Confidence 67899999999999999999999999887554 3467788999998744
No 326
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=92.17 E-value=0.85 Score=49.49 Aligned_cols=109 Identities=13% Similarity=0.023 Sum_probs=65.3
Q ss_pred CcEEEEEcCCCCCCCCCCcChhHHHHHHh---CCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHc--
Q psy1288 432 NPCILYGYGGFAVSLQPGFSVTKIVFLRD---FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIAS-- 506 (1012)
Q Consensus 432 ~P~vv~~hGg~~~~~~~~~~~~~~~~l~~---~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~-- 506 (1012)
.++++++-|.+|.. .|=..++..|-+ ..+.|+.....|....... .........-+++|.+.-...+++.
T Consensus 2 ~~li~~IPGNPGlv---~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~--~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV---EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSN--SKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChH---HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc--ccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 46888888887644 232233333332 3688999888886643222 0000122333445554433222222
Q ss_pred --CCCCCCcEEEEecChHHHHHHHHHhhCC---CceeEEEEccC
Q psy1288 507 --GYTQSSRLAIQGGSNGGLLTAACINQRP---DLFGAAIVQVG 545 (1012)
Q Consensus 507 --~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~~ 545 (1012)
......++.++|||.|+++++.++.+.+ ..+..++...|
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfP 120 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFP 120 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCC
Confidence 1114578999999999999999999988 45566666666
No 327
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=92.14 E-value=3.1 Score=47.60 Aligned_cols=69 Identities=13% Similarity=0.022 Sum_probs=44.4
Q ss_pred ccCCC-CCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCC---CCccccchhhhhHHHHHH
Q psy1288 641 LKGKQ-YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG---GKPTTKQFPLTIPVIYFY 716 (1012)
Q Consensus 641 ~~~~~-~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~---~~~~~~~~~~~~~~~~fl 716 (1012)
+.+++ +| +|.+-|..|..|+++++.......... .......+..+++||-. |... ..+-+..+.+|+
T Consensus 333 l~~I~~~p-ll~V~ge~D~I~p~~qt~aa~~l~~~~------~s~~k~~~~~~~~GH~Gvf~G~r~--~~~i~P~i~~wl 403 (406)
T TIGR01849 333 PGAITRVA-LLTVEGENDDISGLGQTKAALRLCTGI------PEDMKRHHLQPGVGHYGVFSGSRF--REEIYPLVREFI 403 (406)
T ss_pred HHHCcccc-eEEEeccCCCcCCHHHhHHHHHHhhcC------ChhhceEeecCCCCeEEEeeChhh--hhhhchHHHHHH
Confidence 35778 99 999999999999999987665543221 02234566667889953 2211 123445566777
Q ss_pred HH
Q psy1288 717 LT 718 (1012)
Q Consensus 717 ~~ 718 (1012)
.+
T Consensus 404 ~~ 405 (406)
T TIGR01849 404 RR 405 (406)
T ss_pred Hh
Confidence 64
No 328
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=91.74 E-value=0.51 Score=54.98 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=64.1
Q ss_pred CCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc---------C--------hhHHHHHHhCCeEEEEEcCCCC
Q psy1288 411 KDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF---------S--------VTKIVFLRDFNGIYAIPNIRGG 473 (1012)
Q Consensus 411 ~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------~--------~~~~~~l~~~G~~v~~~d~RG~ 473 (1012)
..+..+.+|++..++ .....|+++++.||++.+...+. . .....|.. -..++.+|..-+
T Consensus 21 ~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~--~an~l~iD~PvG 96 (415)
T PF00450_consen 21 NENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK--FANLLFIDQPVG 96 (415)
T ss_dssp TTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG--TSEEEEE--STT
T ss_pred CCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc--ccceEEEeecCc
Confidence 356788888887665 34668999999999986543111 0 11233443 467777887766
Q ss_pred CCCchhHHhhhhcCCCcchHhHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHH
Q psy1288 474 GEYGERWHDGGRLLNKQNVFDDFQCAAE-YLIASGYTQSSRLAIQGGSNGGLLTAACI 530 (1012)
Q Consensus 474 g~~g~~~~~~~~~~~~~~~~~D~~a~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~ 530 (1012)
.||...-........-....+|+..++. ++...+......+.|.|.|+||..+..++
T Consensus 97 tGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a 154 (415)
T PF00450_consen 97 TGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALA 154 (415)
T ss_dssp STT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHH
T ss_pred eEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhH
Confidence 6665432222111111233455655553 44455666667899999999998765543
No 329
>KOG2382|consensus
Probab=91.71 E-value=1.1 Score=48.91 Aligned_cols=101 Identities=16% Similarity=0.140 Sum_probs=55.2
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYT 509 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~ 509 (1012)
.+.|.++.+||-.+... .|......+....|--|+..|.|-+|..-..- ........+|+...++.... .+
T Consensus 50 ~~~Pp~i~lHGl~GS~~--Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~--~~ 120 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKE--NWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT-----VHNYEAMAEDVKLFIDGVGG--ST 120 (315)
T ss_pred CCCCceEEecccccCCC--CHHHHHHHhcccccCceEEEecccCCCCcccc-----ccCHHHHHHHHHHHHHHccc--cc
Confidence 56788999999765442 33222222222336689999999877542110 11122223344333333222 23
Q ss_pred CCCcEEEEecChHH-HHHHHHHhhCCCceeE
Q psy1288 510 QSSRLAIQGGSNGG-LLTAACINQRPDLFGA 539 (1012)
Q Consensus 510 d~~~i~i~G~S~GG-~l~~~~~~~~p~~f~a 539 (1012)
.-.++.+.|||||| -++++.....|++...
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~r 151 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIER 151 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccce
Confidence 45678899999999 4444445556776443
No 330
>KOG1274|consensus
Probab=91.70 E-value=16 Score=44.84 Aligned_cols=193 Identities=10% Similarity=0.007 Sum_probs=104.1
Q ss_pred eEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee-ceeecceeeeee
Q psy1288 130 SVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY-PEVLHRLKFVSI 208 (1012)
Q Consensus 130 ~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~-~~t~~~~~~~~~ 208 (1012)
..+.+...+.+++.-+++. -...+...++|-+|++||+..+ .+.|-++++.++... .+....+....+
T Consensus 76 ~tv~~y~fps~~~~~iL~R------ftlp~r~~~v~g~g~~iaagsd-----D~~vK~~~~~D~s~~~~lrgh~apVl~l 144 (933)
T KOG1274|consen 76 NTVLRYKFPSGEEDTILAR------FTLPIRDLAVSGSGKMIAAGSD-----DTAVKLLNLDDSSQEKVLRGHDAPVLQL 144 (933)
T ss_pred ceEEEeeCCCCCccceeee------eeccceEEEEecCCcEEEeecC-----ceeEEEEeccccchheeecccCCceeee
Confidence 4455556666666645442 1245778999999999998654 457888888765432 222233445778
Q ss_pred EEeeCCCeEEEEecCCCCCcccCCCCCceEEEEee------------cc----ccceeeeeeecCCCEEEEEECCCCCCc
Q psy1288 209 AWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT------------VN----VAPITSQYITNEGPQFVFKTNKDAPNY 272 (1012)
Q Consensus 209 ~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~------------~~----~~~i~~~~~s~dg~~l~~~tn~~~~~~ 272 (1012)
.+.|.|..|+.++-++.. +++-... .+ ...+..+.|+|+|++|++..-++
T Consensus 145 ~~~p~~~fLAvss~dG~v----------~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~---- 210 (933)
T KOG1274|consen 145 SYDPKGNFLAVSSCDGKV----------QIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN---- 210 (933)
T ss_pred eEcCCCCEEEEEecCceE----------EEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC----
Confidence 999999988887655321 1110000 00 01122456999999999987542
Q ss_pred eEEEEeCCCCcccCcEEeeccCCCc---eeeeeEE-ecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecc
Q psy1288 273 RLITIDFDNFAESNWKTLIEENKDD---VLDWATC-VANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSG 348 (1012)
Q Consensus 273 ~L~~~dl~~~~~~~~~~l~~~~~~~---~~~~~~~-~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~ 348 (1012)
.+..++..+ |..+..-.++. .+....+ +.|.+|..+... .+|.+|+.++-+. ......|-..+|
T Consensus 211 ~Vkvy~r~~-----we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~---g~I~vWnv~t~~~----~~~~~~Vc~~aw 278 (933)
T KOG1274|consen 211 TVKVYSRKG-----WELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLD---GQILVWNVDTHER----HEFKRAVCCEAW 278 (933)
T ss_pred eEEEEccCC-----ceeheeecccccccceEEEEEcCCCcEEeeeccC---CcEEEEecccchh----ccccceeEEEec
Confidence 233343333 44433222221 1222333 234566554443 4688888854111 111223444556
Q ss_pred cccCcEEEEEe
Q psy1288 349 KKKYSEIFYSF 359 (1012)
Q Consensus 349 spdg~~l~~~~ 359 (1012)
-|+.+.|-+..
T Consensus 279 ~p~~n~it~~~ 289 (933)
T KOG1274|consen 279 KPNANAITLIT 289 (933)
T ss_pred CCCCCeeEEEe
Confidence 66655554443
No 331
>KOG2183|consensus
Probab=91.37 E-value=0.92 Score=50.45 Aligned_cols=90 Identities=21% Similarity=0.301 Sum_probs=62.9
Q ss_pred HHHHhCCeEEEEEcCCCCCC---CchhHHhhhhc---CCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHH
Q psy1288 456 VFLRDFNGIYAIPNIRGGGE---YGERWHDGGRL---LNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAAC 529 (1012)
Q Consensus 456 ~~l~~~G~~v~~~d~RG~g~---~g~~~~~~~~~---~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 529 (1012)
....+.+-.++.+..|--|+ +|..-+..... ..-.....|+...+.+|..........+.++|+|+||.++++.
T Consensus 105 D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 105 DLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred hhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHH
Confidence 34456688888888885443 44442222111 1223457788888888887755666789999999999999999
Q ss_pred HhhCCCceeEEEEccC
Q psy1288 530 INQRPDLFGAAIVQVG 545 (1012)
Q Consensus 530 ~~~~p~~f~a~v~~~~ 545 (1012)
-.++|.+..++++.+.
T Consensus 185 RlKYPHiv~GAlAaSA 200 (492)
T KOG2183|consen 185 RLKYPHIVLGALAASA 200 (492)
T ss_pred HhcChhhhhhhhhccC
Confidence 9999998776666543
No 332
>KOG2315|consensus
Probab=91.34 E-value=29 Score=40.35 Aligned_cols=193 Identities=9% Similarity=0.073 Sum_probs=99.1
Q ss_pred EeeeEEECCCC--cEEEEEEeCCCCceEEEEEEECC-CCceec---eeecceeeeeeEEeeCCCeEEEEecCCCC-Cccc
Q psy1288 158 SLGSYSFSEDG--KTLAYCLSSSGSDWTSMHFKDVA-TGKEYP---EVLHRLKFVSIAWTHDHKGVFYSNQEPKS-KSKK 230 (1012)
Q Consensus 158 ~i~~~~~SPDG--k~iAy~~~~~G~~~~~L~v~dl~-tg~~~~---~t~~~~~~~~~~WSpDG~~l~y~~~~~~~-~g~~ 230 (1012)
.++.+.+||-+ -.||.-+...++.-..++++-.. .+...+ -++-.+.-..+.|.+-|..|+.+....-+ .+.
T Consensus 167 ~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~- 245 (566)
T KOG2315|consen 167 GITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNA- 245 (566)
T ss_pred ceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCc-
Confidence 56778888864 45665554443333344444332 122111 12323333678999999998877532111 111
Q ss_pred CCCCCceEEEEeeccc---------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeee
Q psy1288 231 HSKKNRSSAYHLTVNV---------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDW 301 (1012)
Q Consensus 231 ~~~~~~~l~~~~~~~~---------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~ 301 (1012)
.--..+.|++....+. .+|-...|++.|..|.++..-- ...+-..|++.. ..--+++.++..+
T Consensus 246 SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfM--PAkvtifnlr~~----~v~df~egpRN~~-- 317 (566)
T KOG2315|consen 246 SYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYGFM--PAKVTIFNLRGK----PVFDFPEGPRNTA-- 317 (566)
T ss_pred cccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEecc--cceEEEEcCCCC----EeEeCCCCCccce--
Confidence 1112334444432211 2232345999999999886432 223444444321 1222233333322
Q ss_pred eEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecC
Q psy1288 302 ATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 302 ~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss 361 (1012)
+....|+.|++.--.+-...+-+||+.+-+.... ......+-+.|+|||..++-...+
T Consensus 318 ~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~--~~a~~tt~~eW~PdGe~flTATTa 375 (566)
T KOG2315|consen 318 FFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAK--FKAANTTVFEWSPDGEYFLTATTA 375 (566)
T ss_pred EECCCCCEEEEeecCCCCCceEEEeccchhhccc--cccCCceEEEEcCCCcEEEEEecc
Confidence 2223446667666666678899999965332222 222223357899999877655544
No 333
>KOG1538|consensus
Probab=91.32 E-value=16 Score=43.03 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=43.9
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEe
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~ 221 (1012)
..+.+.++-|||..+...+. ..++++|+..|..++....+ ....-++||.||+.++-.+
T Consensus 13 hci~d~afkPDGsqL~lAAg------~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~ 72 (1081)
T KOG1538|consen 13 HCINDIAFKPDGTQLILAAG------SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGS 72 (1081)
T ss_pred cchheeEECCCCceEEEecC------CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCC
Confidence 46778999999999987664 27999999888876533322 2346789999999776443
No 334
>KOG0286|consensus
Probab=91.13 E-value=24 Score=37.72 Aligned_cols=159 Identities=11% Similarity=0.052 Sum_probs=78.2
Q ss_pred EEEEEEECCCCceeceeecc-eeeeeeEEee-CCCeEEEEecCCCCCcccCCCCCceEEEEee--------ccccceeee
Q psy1288 183 TSMHFKDVATGKEYPEVLHR-LKFVSIAWTH-DHKGVFYSNQEPKSKSKKHSKKNRSSAYHLT--------VNVAPITSQ 252 (1012)
Q Consensus 183 ~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSp-DG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~--------~~~~~i~~~ 252 (1012)
.+.-++|+++|+.++.-.++ +..-++..+| |++.++--.-+. ..+++-.+. .+..+|...
T Consensus 166 ~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~----------~aklWD~R~~~c~qtF~ghesDINsv 235 (343)
T KOG0286|consen 166 MTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDK----------SAKLWDVRSGQCVQTFEGHESDINSV 235 (343)
T ss_pred ceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccccc----------ceeeeeccCcceeEeecccccccceE
Confidence 46778888888876533322 2346678888 887654433321 111111110 011233333
Q ss_pred eeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCC-CceeeeeEEecCCEEEE-EEEcCceEEEEEEecCCC
Q psy1288 253 YITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENK-DDVLDWATCVANDKLIL-SYIHHVKNVMHLHDLASG 330 (1012)
Q Consensus 253 ~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~~-~~~~~g~~~l~~~dl~~G 330 (1012)
.+.|+|..|.--++. ..-+|| |+.... -..+..+.. .--+..+.....++|++ .+.+ ....+||.-.|
T Consensus 236 ~ffP~G~afatGSDD--~tcRly--DlRaD~---~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d---~~c~vWDtlk~ 305 (343)
T KOG0286|consen 236 RFFPSGDAFATGSDD--ATCRLY--DLRADQ---ELAVYSHDSIICGITSVAFSKSGRLLFAGYDD---FTCNVWDTLKG 305 (343)
T ss_pred EEccCCCeeeecCCC--ceeEEE--eecCCc---EEeeeccCcccCCceeEEEcccccEEEeeecC---CceeEeecccc
Confidence 467888765554432 233444 443321 011222111 11122333333344444 4443 34667887567
Q ss_pred ceeeeecCCceEEEeecccccCcEEEEEecCCC
Q psy1288 331 KHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFL 363 (1012)
Q Consensus 331 ~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~ 363 (1012)
+....|.....-|+.+..+|||.. +...|+.
T Consensus 306 e~vg~L~GHeNRvScl~~s~DG~a--v~TgSWD 336 (343)
T KOG0286|consen 306 ERVGVLAGHENRVSCLGVSPDGMA--VATGSWD 336 (343)
T ss_pred ceEEEeeccCCeeEEEEECCCCcE--EEecchh
Confidence 666666655666778888999854 3344443
No 335
>KOG3043|consensus
Probab=90.71 E-value=0.24 Score=50.61 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=42.6
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+++.|+|++.|++|.-||+..--++-+.|++.-. . ...+.+|++-||||..
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~----~--~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPA----V--GSQVKTFSGVGHGFVA 212 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcc----c--ceeEEEcCCccchhhh
Confidence 4449999999999999999988888888888732 1 2578899999999984
No 336
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=90.68 E-value=0.4 Score=43.71 Aligned_cols=43 Identities=26% Similarity=0.265 Sum_probs=35.5
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCC
Q psy1288 647 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 700 (1012)
Q Consensus 647 P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~ 700 (1012)
+++|++.+..|+.+|+..+.++.++|..+ .+++..+.||+...
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~s-----------~lvt~~g~gHg~~~ 77 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPGS-----------RLVTVDGAGHGVYA 77 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCCc-----------eEEEEeccCcceec
Confidence 45999999999999999998888776543 57777888999753
No 337
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.19 E-value=0.68 Score=48.67 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=36.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++-|+|+..|-.|+-||++.-..+|++|-. +=.+.+||.-+|...
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~----------~K~i~iy~~~aHe~~ 302 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTT----------SKTIEIYPYFAHEGG 302 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccC----------CceEEEeeccccccC
Confidence 8999999999999999999988888887754 224556776778654
No 338
>KOG1539|consensus
Probab=90.01 E-value=0.8 Score=54.74 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=45.0
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEec
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
.+.++.+|||||||+-..-. ..|++||+.+|....--.-.....++++||.|..|+-+..
T Consensus 578 ritd~~FS~DgrWlisasmD-----~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASMD-----STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHV 637 (910)
T ss_pred ceeeeEeCCCCcEEEEeecC-----CcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEe
Confidence 67899999999999865542 3899999999987542222223477899999998876653
No 339
>KOG2110|consensus
Probab=89.89 E-value=3.4 Score=45.16 Aligned_cols=64 Identities=23% Similarity=0.303 Sum_probs=47.4
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec---ceeeeeeEEeeCCCeEEEEec
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH---RLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~---~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
+...+...++||||..||=.++. | .-|+|+.+.+|+....-.. .....+.+|+||++.|.-+++
T Consensus 172 H~~~lAalafs~~G~llATASeK-G---TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~ 238 (391)
T KOG2110|consen 172 HKGPLAALAFSPDGTLLATASEK-G---TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSN 238 (391)
T ss_pred cCCceeEEEECCCCCEEEEeccC-c---eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecC
Confidence 34568899999999999965554 3 4899999998876432111 235688999999998777664
No 340
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=89.86 E-value=0.64 Score=54.78 Aligned_cols=72 Identities=13% Similarity=0.229 Sum_probs=55.7
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHHHhhhccC-CCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHh
Q psy1288 648 ATLLMTADHDDRVSPVHSLKFAATLQEKLRDY-PHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTS 719 (1012)
Q Consensus 648 ~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~-~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~ 719 (1012)
.||+.||..|+.+++..+..++.++.+..... ..-...++|...|+.+|..+.......+.+..+++|+++-
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 39999999999999999999999998873110 0113468899999999998876555567777777888743
No 341
>KOG0299|consensus
Probab=89.80 E-value=38 Score=38.43 Aligned_cols=49 Identities=24% Similarity=0.131 Sum_probs=33.1
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-eecceeeeeeEEe
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-VLHRLKFVSIAWT 211 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t~~~~~~~~~~WS 211 (1012)
-+-..++||||++||+.- ....|.|+|.++.+.+.. +.......+.++-
T Consensus 204 eil~~avS~Dgkylatgg-----~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr 253 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGG-----RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFR 253 (479)
T ss_pred eeEEEEEcCCCcEEEecC-----CCceEEEecCcccchhhcccccccceeeeeee
Confidence 455789999999999742 234778999999987664 2222334555553
No 342
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=89.70 E-value=0.29 Score=51.52 Aligned_cols=45 Identities=16% Similarity=-0.075 Sum_probs=36.1
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||++|++|.-||+..+.++.+.+. .++++++++.||.+-
T Consensus 186 ~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~ 230 (245)
T TIGR01738 186 NISVPFLRLYGYLDGLVPAKVVPYLDKLAP-----------HSELYIFAKAAHAPF 230 (245)
T ss_pred cCCCCEEEEeecCCcccCHHHHHHHHHhCC-----------CCeEEEeCCCCCCcc
Confidence 677999999999999999887776654432 357788999999864
No 343
>KOG2551|consensus
Probab=89.66 E-value=4 Score=41.93 Aligned_cols=61 Identities=16% Similarity=0.160 Sum_probs=41.3
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSG 720 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l 720 (1012)
.+++| .|.|-|..|..++...+..++.....+ ..+.-.+||-.-... .....+.+|++..+
T Consensus 161 ~i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a------------~vl~HpggH~VP~~~----~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 161 PLSTP-SLHIFGETDTIVPSERSEQLAESFKDA------------TVLEHPGGHIVPNKA----KYKEKIADFIQSFL 221 (230)
T ss_pred CCCCC-eeEEecccceeecchHHHHHHHhcCCC------------eEEecCCCccCCCch----HHHHHHHHHHHHHH
Confidence 47888 999999999999999888877765543 333345788875533 23334456666543
No 344
>KOG0315|consensus
Probab=89.64 E-value=29 Score=36.30 Aligned_cols=183 Identities=10% Similarity=0.014 Sum_probs=94.1
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
..+..+.|--||+++. +. +|...+.|+|+..-...+.-........+.-.|.-..|+-..+.+ +.
T Consensus 84 kNVtaVgF~~dgrWMy-Tg----seDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg----------~i 148 (311)
T KOG0315|consen 84 KNVTAVGFQCDGRWMY-TG----SEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSG----------NI 148 (311)
T ss_pred CceEEEEEeecCeEEE-ec----CCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCC----------cE
Confidence 4677888999999985 33 334488999988743322222222334556666544443332211 11
Q ss_pred eEEEEe---------eccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcc-cCcEEe--eccCCCceeeeeEE
Q psy1288 237 SSAYHL---------TVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAE-SNWKTL--IEENKDDVLDWATC 304 (1012)
Q Consensus 237 ~l~~~~---------~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~-~~~~~l--~~~~~~~~~~~~~~ 304 (1012)
.++-.. +.....+....+.|||..+.-..|++ ..|..++-.... .....+ +.......+.-...
T Consensus 149 rvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG----~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lS 224 (311)
T KOG0315|consen 149 RVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKG----NCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLS 224 (311)
T ss_pred EEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCc----cEEEEEccCCCccccceEhhheecccceEEEEEEC
Confidence 111110 11113344445789999888777653 466666544221 111111 12233455666666
Q ss_pred ecCCEEEEEEEcCceEEEEEEecCCC-ceeeeecCCceEEEeecccccCcEEEEEecCC
Q psy1288 305 VANDKLILSYIHHVKNVMHLHDLASG-KHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSF 362 (1012)
Q Consensus 305 ~~~~~l~~~~~~~g~~~l~~~dl~~G-~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~ 362 (1012)
+++++|+....+ ..+++|+.++= +....++....-+..-.||.||..| ++.++.
T Consensus 225 Pd~k~lat~ssd---ktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~Yl-vTassd 279 (311)
T KOG0315|consen 225 PDVKYLATCSSD---KTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYL-VTASSD 279 (311)
T ss_pred CCCcEEEeecCC---ceEEEEecCCceeeEEEeecCCceEEeeeeccCccEE-EecCCC
Confidence 665566554432 45677777432 2222334334556677788887654 444443
No 345
>KOG0306|consensus
Probab=89.62 E-value=10 Score=45.27 Aligned_cols=174 Identities=16% Similarity=0.149 Sum_probs=92.8
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC-----CCCce---------eceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV-----ATGKE---------YPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl-----~tg~~---------~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
...+.+.+.||||+..+-.... .++.+||. ..|.. +.+.++. ....++.||||+.|+..=
T Consensus 454 dgaIWsi~~~pD~~g~vT~saD-----ktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~d-dvL~v~~Spdgk~LaVsL 527 (888)
T KOG0306|consen 454 DGAIWSISLSPDNKGFVTGSAD-----KTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELED-DVLCVSVSPDGKLLAVSL 527 (888)
T ss_pred ccceeeeeecCCCCceEEecCC-----cEEEEEeEEEEeccCcccceeeeeccceEEeccc-cEEEEEEcCCCcEEEEEe
Confidence 3467889999999998754322 23444432 22221 1122222 246789999999887764
Q ss_pred cCCCCCcccCCCCCceEEEEeec----cc----cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeecc
Q psy1288 222 QEPKSKSKKHSKKNRSSAYHLTV----NV----APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEE 293 (1012)
Q Consensus 222 ~~~~~~g~~~~~~~~~l~~~~~~----~~----~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~ 293 (1012)
.+. .-++||..+. +. -++..-.+|||++.++ +...+ .+.+++-+|...-- +.++++
T Consensus 528 Ldn----------TVkVyflDtlKFflsLYGHkLPV~smDIS~DSkliv-TgSAD-KnVKiWGLdFGDCH----KS~fAH 591 (888)
T KOG0306|consen 528 LDN----------TVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIV-TGSAD-KNVKIWGLDFGDCH----KSFFAH 591 (888)
T ss_pred ccC----------eEEEEEecceeeeeeecccccceeEEeccCCcCeEE-eccCC-CceEEeccccchhh----hhhhcc
Confidence 331 2345554431 11 2223334788876544 33322 46788888774321 345555
Q ss_pred CCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEE
Q psy1288 294 NKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEI 355 (1012)
Q Consensus 294 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l 355 (1012)
. +.+..-...++ .+++++...++ .+..||-+.=+..+.+......+.-++.+|+|+.+
T Consensus 592 d-DSvm~V~F~P~-~~~FFt~gKD~--kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~v 649 (888)
T KOG0306|consen 592 D-DSVMSVQFLPK-THLFFTCGKDG--KVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFV 649 (888)
T ss_pred c-CceeEEEEccc-ceeEEEecCcc--eEEeechhhhhhheeeccchheeeeeEEcCCCCeE
Confidence 4 34333333444 67777765554 45566542112223333334556677778888743
No 346
>KOG0275|consensus
Probab=89.50 E-value=1.2 Score=47.22 Aligned_cols=63 Identities=14% Similarity=0.163 Sum_probs=45.8
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeeccee-eeeeEEeeCCCeEEEEecCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLK-FVSIAWTHDHKGVFYSNQEP 224 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~-~~~~~WSpDG~~l~y~~~~~ 224 (1012)
..+...+||-|+.+|+=.. -..++++--+.+|+.+..-.+..+ .....+++||..|+-.+.+.
T Consensus 307 kGvt~l~FSrD~SqiLS~s-----fD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 307 KGVTCLSFSRDNSQILSAS-----FDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred cCeeEEEEccCcchhhccc-----ccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 3577899999999886322 235888889999997765444433 36689999999998776553
No 347
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=89.45 E-value=2.2 Score=45.06 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=26.5
Q ss_pred CCCCCcEEEEecChHHHHHHHHHhhCC---CceeEEEEcc
Q psy1288 508 YTQSSRLAIQGGSNGGLLTAACINQRP---DLFGAAIVQV 544 (1012)
Q Consensus 508 ~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~ 544 (1012)
...+.+|.++||||||.++-.++...+ +.+..+|...
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~ 120 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLG 120 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEc
Confidence 467889999999999998877765533 3455555543
No 348
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=89.27 E-value=30 Score=39.83 Aligned_cols=197 Identities=11% Similarity=0.043 Sum_probs=105.4
Q ss_pred eEeeeEEECCC--CcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCC
Q psy1288 157 VSLGSYSFSED--GKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK 233 (1012)
Q Consensus 157 ~~i~~~~~SPD--Gk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~ 233 (1012)
..+..+.|||- |.-|||-....++.-.++.++.+--+..+. -++-....-.+-|-+.|+.|++...+....+...-+
T Consensus 174 ~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfg 253 (561)
T COG5354 174 VGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFG 253 (561)
T ss_pred cceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceec
Confidence 45778999996 566888887766656677777776555433 233333345689999999999986543211110011
Q ss_pred CCceEEEEee------c--cc-cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEE
Q psy1288 234 KNRSSAYHLT------V--NV-APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATC 304 (1012)
Q Consensus 234 ~~~~l~~~~~------~--~~-~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~ 304 (1012)
+ ..|+.... + +. ..+-...|+|+++++.+.+... ...+...++.+. .+-.+++.....+- ..
T Consensus 254 e-snLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~--pa~~s~~~lr~N----l~~~~Pe~~rNT~~--fs 324 (561)
T COG5354 254 E-SNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYM--PASVSVFDLRGN----LRFYFPEQKRNTIF--FS 324 (561)
T ss_pred c-ceEEEEeecccccceeccccccceeeeecccCCceeEEeccc--ccceeecccccc----eEEecCCccccccc--cc
Confidence 1 11222111 0 11 1222335999999999998422 123444444331 23333443333221 11
Q ss_pred ecCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCC
Q psy1288 305 VANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFL 363 (1012)
Q Consensus 305 ~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~ 363 (1012)
..++++++..-.+-...+.+++.. |+.+..-.+.....+-..|+||+.-+...+.+..
T Consensus 325 p~~r~il~agF~nl~gni~i~~~~-~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k 382 (561)
T COG5354 325 PHERYILFAGFDNLQGNIEIFDPA-GRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEK 382 (561)
T ss_pred CcccEEEEecCCccccceEEeccC-CceEEEEEeecCCceEeeccCCceEEEecCCCcc
Confidence 223566665555555667778873 5443221222112223468999987766666544
No 349
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=89.16 E-value=0.46 Score=54.22 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=38.2
Q ss_pred CCCCceEEEcccCCCCCCCcch-HHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHS-LKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||++|++|.-+|+..+ .+++..|.++-- .++++++++.||..-
T Consensus 290 ~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip-------~~~l~~i~~aGH~~~ 339 (360)
T PLN02679 290 RISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP-------NVTLYVLEGVGHCPH 339 (360)
T ss_pred hcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC-------ceEEEEcCCCCCCcc
Confidence 6789999999999999998754 345566655422 478999999999864
No 350
>KOG0643|consensus
Probab=89.04 E-value=8.6 Score=40.41 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=48.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC-------CCc-eeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA-------TGK-EYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~-------tg~-~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
.+....||++|.+++++.+..=...+.|.++|++ +.+ .+.......+...+.|+|-|+.|++-..+
T Consensus 95 ~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~ 168 (327)
T KOG0643|consen 95 PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHED 168 (327)
T ss_pred eeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCC
Confidence 5668899999999999998764456788889886 333 22233334456889999999999887654
No 351
>PRK02888 nitrous-oxide reductase; Validated
Probab=88.87 E-value=24 Score=42.33 Aligned_cols=193 Identities=13% Similarity=0.046 Sum_probs=93.8
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCce-EEEcCCCCCCCCC----------ce---EeeeEEECCCCcEEEEEEeC
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEA-RVFLDPNNLSDDG----------TV---SLGSYSFSEDGKTLAYCLSS 177 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~-~~L~D~n~la~~g----------~~---~i~~~~~SPDGk~iAy~~~~ 177 (1012)
..||+|+|-. +. ....+-|.++..-+- +++--||.-...| +. .-...=++|||+.+.-.
T Consensus 138 ~ydGr~~fin--dk--~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~--- 210 (635)
T PRK02888 138 TYDGRYLFIN--DK--ANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDP--- 210 (635)
T ss_pred ccceeEEEEe--cC--CCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecc---
Confidence 3566655542 21 246677776654333 3333455543322 10 01134578999977221
Q ss_pred CCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcc---cCCCCCc-eEEEEeeccccceeeee
Q psy1288 178 SGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK---KHSKKNR-SSAYHLTVNVAPITSQY 253 (1012)
Q Consensus 178 ~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~---~~~~~~~-~l~~~~~~~~~~i~~~~ 253 (1012)
......+-++|.++-+......-........++|||++++.+..+.+...+ .+.++.. .+.+.. ..++ .
T Consensus 211 -~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni----~~ie--a 283 (635)
T PRK02888 211 -KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNI----ARIE--E 283 (635)
T ss_pred -cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEch----HHHH--H
Confidence 334457888999987654322222234567999999998887643221111 1111111 111111 1111 2
Q ss_pred eecCCCEEEEEECCCCCCceEEEEeCCCCc--ccCcEEee--ccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCC
Q psy1288 254 ITNEGPQFVFKTNKDAPNYRLITIDFDNFA--ESNWKTLI--EENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLAS 329 (1012)
Q Consensus 254 ~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~--~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~ 329 (1012)
+.++|+..++. ..++..+|..+.. .......+ ...+.. ....+|++++++.-. ....+.++|+++
T Consensus 284 ~vkdGK~~~V~------gn~V~VID~~t~~~~~~~v~~yIPVGKsPHG---V~vSPDGkylyVank--lS~tVSVIDv~k 352 (635)
T PRK02888 284 AVKAGKFKTIG------GSKVPVVDGRKAANAGSALTRYVPVPKNPHG---VNTSPDGKYFIANGK--LSPTVTVIDVRK 352 (635)
T ss_pred hhhCCCEEEEC------CCEEEEEECCccccCCcceEEEEECCCCccc---eEECCCCCEEEEeCC--CCCcEEEEEChh
Confidence 45678766651 2457777766510 00122222 222222 223456667666432 235677888754
No 352
>KOG0771|consensus
Probab=88.53 E-value=11 Score=42.15 Aligned_cols=59 Identities=15% Similarity=0.132 Sum_probs=40.5
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce-eceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE-YPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~-~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+++++||..||-.. ..-.|+|++..+-.. +.+...........|||||+.|++++.+
T Consensus 148 k~vaf~~~gs~latgg-----~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d 207 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGG-----TDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD 207 (398)
T ss_pred eEEEEcCCCCEeeecc-----ccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC
Confidence 5789999999998643 234788888544332 2222233445789999999999999755
No 353
>PLN02511 hydrolase
Probab=88.51 E-value=0.55 Score=54.12 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=41.3
Q ss_pred hHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 795 LLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 795 ~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
+...|+...+. +|+.|+|||+|++|+.||.....+ .+.+. .+ .+.+++.++.||-.
T Consensus 285 y~~~s~~~~L~-------~I~vPtLiI~g~dDpi~p~~~~~~---~~~~~-~p------~~~l~~~~~gGH~~ 340 (388)
T PLN02511 285 YSNSSSSDSIK-------HVRVPLLCIQAANDPIAPARGIPR---EDIKA-NP------NCLLIVTPSGGHLG 340 (388)
T ss_pred HHHcCchhhhc-------cCCCCeEEEEcCCCCcCCcccCcH---hHHhc-CC------CEEEEECCCcceec
Confidence 45667788888 899999999999999999765422 11111 21 57899999999963
No 354
>KOG0286|consensus
Probab=88.50 E-value=39 Score=36.24 Aligned_cols=187 Identities=13% Similarity=0.072 Sum_probs=100.4
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCc-eeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGK-EYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKN 235 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~-~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~ 235 (1012)
..+..+.||+|.|+|+= .+.+| .|.|+|.-|.. ....+.+..-.-..++||.|+.++--..+.
T Consensus 56 ~Ki~~~~ws~Dsr~ivS-aSqDG----klIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN----------- 119 (343)
T KOG0286|consen 56 NKIYAMDWSTDSRRIVS-ASQDG----KLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN----------- 119 (343)
T ss_pred cceeeeEecCCcCeEEe-eccCC----eEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc-----------
Confidence 35778999999999963 44445 68899976543 333444444345678999999777654331
Q ss_pred ceEEEEee-c----------cccce----eeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceee
Q psy1288 236 RSSAYHLT-V----------NVAPI----TSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLD 300 (1012)
Q Consensus 236 ~~l~~~~~-~----------~~~~i----~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~ 300 (1012)
.-.+|... . ...+. ....+-. ..+|+-.+ ........|++++. ....+.....+++.
T Consensus 120 ~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~S----GD~TCalWDie~g~---~~~~f~GH~gDV~s 191 (343)
T KOG0286|consen 120 KCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGS----GDMTCALWDIETGQ---QTQVFHGHTGDVMS 191 (343)
T ss_pred eeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecC----CCceEEEEEcccce---EEEEecCCcccEEE
Confidence 11112111 0 00111 1111222 23332222 23456667777765 13333333344443
Q ss_pred eeEEe-cCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 301 WATCV-ANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 301 ~~~~~-~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
-...+ + ...+++-.-+ ....+||+..|.-++.++....+|..+.+-|+|..++ .-+ +-...-.||+.
T Consensus 192 lsl~p~~-~ntFvSg~cD--~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afa--tGS--DD~tcRlyDlR 259 (343)
T KOG0286|consen 192 LSLSPSD-GNTFVSGGCD--KSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFA--TGS--DDATCRLYDLR 259 (343)
T ss_pred EecCCCC-CCeEEecccc--cceeeeeccCcceeEeecccccccceEEEccCCCeee--ecC--CCceeEEEeec
Confidence 32222 3 3334433333 3456778877766666766677788888889986544 322 23345566774
No 355
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=88.28 E-value=10 Score=41.95 Aligned_cols=51 Identities=10% Similarity=0.058 Sum_probs=33.3
Q ss_pred EEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 320 NVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 320 ~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
..||+++. .|...+.+......-.++.||||++.+|++-+. ...|+++++.
T Consensus 143 G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~---~~~i~r~~~d 193 (307)
T COG3386 143 GSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTP---ANRIHRYDLD 193 (307)
T ss_pred ceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCC---CCeEEEEecC
Confidence 36888887 455444444323333478899999988877533 3578888773
No 356
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=88.18 E-value=0.88 Score=52.84 Aligned_cols=83 Identities=17% Similarity=0.187 Sum_probs=51.8
Q ss_pred HHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 454 KIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 454 ~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
....|.+.||.+ ..|.+|.+ .+|.... .....++++...++.+.+. ....++.++||||||+++...+..+
T Consensus 113 li~~L~~~GY~~-~~dL~g~g---YDwR~~~---~~~~~~~~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 113 MIEQLIKWGYKE-GKTLFGFG---YDFRQSN---RLPETMDGLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHcCCcc-CCCcccCC---CCccccc---cHHHHHHHHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHHHHC
Confidence 456677789866 56777744 4454321 1112244555555555443 2346899999999999999888877
Q ss_pred CCc----eeEEEEccC
Q psy1288 534 PDL----FGAAIVQVG 545 (1012)
Q Consensus 534 p~~----f~a~v~~~~ 545 (1012)
|+. ++..|+.++
T Consensus 184 p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 184 SDVFEKYVNSWIAIAA 199 (440)
T ss_pred CHhHHhHhccEEEECC
Confidence 764 355555544
No 357
>KOG2182|consensus
Probab=88.09 E-value=2.8 Score=48.11 Aligned_cols=115 Identities=19% Similarity=0.184 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCCCCCCCC-Cc-ChhHHHHHHhCCeEEEEEcCCCCCCC---chhHHhhhhcCCCcchHhHHHHHHHHHHH
Q psy1288 431 NNPCILYGYGGFAVSLQP-GF-SVTKIVFLRDFNGIYAIPNIRGGGEY---GERWHDGGRLLNKQNVFDDFQCAAEYLIA 505 (1012)
Q Consensus 431 ~~P~vv~~hGg~~~~~~~-~~-~~~~~~~l~~~G~~v~~~d~RG~g~~---g~~~~~~~~~~~~~~~~~D~~a~~~~l~~ 505 (1012)
..|+.|++-|-......+ .. ...+..|.++.|..|+...+|=-|.. +..-...-+...-...+.|+...++.+-.
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 357777775522222111 11 23467888888999999999953311 11111111112223446677777777665
Q ss_pred c-CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 506 S-GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 506 ~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+ ...++.+...+|+|+-|.|+++.-..+|++..++|+.++
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSa 205 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSA 205 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccc
Confidence 5 345656899999999999999999999999988887765
No 358
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=87.84 E-value=1.1 Score=44.72 Aligned_cols=42 Identities=24% Similarity=0.204 Sum_probs=32.9
Q ss_pred CceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 816 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 816 ~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
.|.|||||+.|.-|.+....+.... + +..+++.++..|-|..
T Consensus 150 ~~~lvi~g~~Ddvv~l~~~l~~~~~-----~-------~~~~i~i~~a~HFF~g 191 (210)
T COG2945 150 SPGLVIQGDADDVVDLVAVLKWQES-----I-------KITVITIPGADHFFHG 191 (210)
T ss_pred CCceeEecChhhhhcHHHHHHhhcC-----C-------CCceEEecCCCceecc
Confidence 8999999999977776655554332 4 8889999999998764
No 359
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=87.69 E-value=0.53 Score=54.12 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=41.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeC-CCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIET-KAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~gH~~~ 868 (1012)
+|+.|+|||+|++|.-+|+..+.++...+...+. .+.+++.+ +.||...
T Consensus 307 ~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~-------~~~l~~i~~~~GH~~~ 356 (379)
T PRK00175 307 RIKARFLVVSFTSDWLFPPARSREIVDALLAAGA-------DVSYAEIDSPYGHDAF 356 (379)
T ss_pred cCCCCEEEEEECCccccCHHHHHHHHHHHHhcCC-------CeEEEEeCCCCCchhH
Confidence 5669999999999999999999999888887655 66777765 8999754
No 360
>PRK10349 carboxylesterase BioH; Provisional
Probab=87.66 E-value=0.37 Score=51.90 Aligned_cols=46 Identities=15% Similarity=-0.123 Sum_probs=35.1
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
++..|+||++|++|..+|...+..+...+. ..+++++|+.||.+--
T Consensus 194 ~i~~P~lii~G~~D~~~~~~~~~~~~~~i~-----------~~~~~~i~~~gH~~~~ 239 (256)
T PRK10349 194 NVSMPFLRLYGYLDGLVPRKVVPMLDKLWP-----------HSESYIFAKAAHAPFI 239 (256)
T ss_pred hcCCCeEEEecCCCccCCHHHHHHHHHhCC-----------CCeEEEeCCCCCCccc
Confidence 677999999999999998776654433321 3578899999998653
No 361
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=87.59 E-value=6.2 Score=44.57 Aligned_cols=83 Identities=12% Similarity=0.053 Sum_probs=51.3
Q ss_pred hHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 453 TKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 453 ~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
....|+.++|..|++++.++-...-. ...+.....+++..+++.+.+. +.-++|-+.|.|.||.+...++..
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~~~------~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~~~ala~ 201 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDASLA------AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLLAAALAL 201 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHhhh------hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHHHHHHHh
Confidence 45678888899999999886442111 0111111123444555555554 334688899999999998888777
Q ss_pred CCCc-eeEEEEc
Q psy1288 533 RPDL-FGAAIVQ 543 (1012)
Q Consensus 533 ~p~~-f~a~v~~ 543 (1012)
.+.. ++.+...
T Consensus 202 ~~~k~I~S~T~l 213 (445)
T COG3243 202 MAAKRIKSLTLL 213 (445)
T ss_pred hhhcccccceee
Confidence 6665 5544443
No 362
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.46 E-value=2.9 Score=49.38 Aligned_cols=126 Identities=17% Similarity=0.145 Sum_probs=79.8
Q ss_pred eEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcCh-hHHHHHHhCCeEEEEEcCCCCCCCc---hhHH--hhhhcCC
Q psy1288 415 KIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSV-TKIVFLRDFNGIYAIPNIRGGGEYG---ERWH--DGGRLLN 488 (1012)
Q Consensus 415 ~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~RG~g~~g---~~~~--~~~~~~~ 488 (1012)
.|.+.+.+|..+. + ..+...-||+...+...-.. ....-+. +||+++.-|--..+.-+ ..|. .....++
T Consensus 16 ~i~fev~LP~~WN--g--R~~~~GgGG~~G~i~~~~~~~~~~~~~~-~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 16 NIRFEVWLPDNWN--G--RFLQVGGGGFAGGINYADGKASMATALA-RGYATASTDSGHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred eEEEEEECChhhc--c--CeEEECCCeeeCcccccccccccchhhh-cCeEEEEecCCCCCCcccccccccCCHHHHHHH
Confidence 6777888888652 3 24555555554333222210 0122344 69999998853322211 1221 1112234
Q ss_pred CcchHhHHHHHHHHHHHcCC-CCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 489 KQNVFDDFQCAAEYLIASGY-TQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 489 ~~~~~~D~~a~~~~l~~~~~-~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
+...+.+.....+.+++.-+ ..|++-...|.|.||-..+.++.++|+.|..+|+.+|
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaP 148 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAP 148 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCc
Confidence 44455666666777777744 4677888999999999999999999999999999998
No 363
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=87.36 E-value=0.49 Score=52.61 Aligned_cols=47 Identities=15% Similarity=0.175 Sum_probs=38.3
Q ss_pred CC-CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 813 KQ-YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 813 ~~-~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
++ ..|+||+||++|.-||..++.+|++++. ..+++++++.||....+
T Consensus 245 ~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~-----------~~~~~~~~~~gH~~~~~ 292 (306)
T TIGR01249 245 KIRNIPTYIVHGRYDLCCPLQSAWALHKAFP-----------EAELKVTNNAGHSAFDP 292 (306)
T ss_pred hccCCCeEEEecCCCCCCCHHHHHHHHHhCC-----------CCEEEEECCCCCCCCCh
Confidence 45 4799999999999999999888877643 24677889999988665
No 364
>KOG2112|consensus
Probab=87.34 E-value=0.64 Score=47.15 Aligned_cols=48 Identities=21% Similarity=0.117 Sum_probs=44.7
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
++|.|..||+.|+-||..-+++..+.|+..++ ++++..|++-+|....
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~-------~~~f~~y~g~~h~~~~ 191 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGV-------RVTFKPYPGLGHSTSP 191 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCC-------ceeeeecCCccccccH
Confidence 59999999999999999999999999999988 8999999999997643
No 365
>KOG3253|consensus
Probab=87.28 E-value=6.4 Score=46.03 Aligned_cols=48 Identities=17% Similarity=0.215 Sum_probs=42.1
Q ss_pred CCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCc
Q psy1288 814 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPT 871 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~ 871 (1012)
++.|+|++.|.+|.+|++..-|++-..+|+ ++++++.-+.+|.+.-++
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA----------~~elhVI~~adhsmaipk 350 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQA----------EVELHVIGGADHSMAIPK 350 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhc----------cceEEEecCCCccccCCc
Confidence 339999999999999999999999888887 888999999999987443
No 366
>KOG0282|consensus
Probab=87.22 E-value=7.5 Score=44.04 Aligned_cols=182 Identities=8% Similarity=0.013 Sum_probs=88.9
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC-Cceeceeec-ceeeeeeEEeeCCCeEEEEecCCCCCcc-cC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT-GKEYPEVLH-RLKFVSIAWTHDHKGVFYSNQEPKSKSK-KH 231 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t-g~~~~~t~~-~~~~~~~~WSpDG~~l~y~~~~~~~~g~-~~ 231 (1012)
+...+++.+|.|-.-.|..+..-+ ..|+|+++-+ ++.++.-.+ ......++|+.+|+.|+-.+-+....-. ++
T Consensus 213 H~kgvsai~~fp~~~hLlLS~gmD----~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtE 288 (503)
T KOG0282|consen 213 HTKGVSAIQWFPKKGHLLLSGGMD----GLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTE 288 (503)
T ss_pred CccccchhhhccceeeEEEecCCC----ceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccc
Confidence 345788999999444444444333 4788888765 444432222 2335788999999988766644210000 00
Q ss_pred CCCCceEEEEeecccccee-eeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCc--eeeeeEEecCC
Q psy1288 232 SKKNRSSAYHLTVNVAPIT-SQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDD--VLDWATCVAND 308 (1012)
Q Consensus 232 ~~~~~~l~~~~~~~~~~i~-~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~ 308 (1012)
.+. ...-++. ..+. ..-+.||+..+++..- .+.+|...|+.+++ ++.+-+.. .+..+...+++
T Consensus 289 TG~-~~~~f~~----~~~~~cvkf~pd~~n~fl~G~---sd~ki~~wDiRs~k------vvqeYd~hLg~i~~i~F~~~g 354 (503)
T KOG0282|consen 289 TGQ-VLSRFHL----DKVPTCVKFHPDNQNIFLVGG---SDKKIRQWDIRSGK------VVQEYDRHLGAILDITFVDEG 354 (503)
T ss_pred cce-EEEEEec----CCCceeeecCCCCCcEEEEec---CCCcEEEEeccchH------HHHHHHhhhhheeeeEEccCC
Confidence 000 0000110 1111 1236788866666542 45689999988765 22221111 12223333434
Q ss_pred EEEEEEEcCceEEEEEEecCCCceeeeecCC-ceEEEeecccccCcEEE
Q psy1288 309 KLILSYIHHVKNVMHLHDLASGKHLYTFPLD-VGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~-~~~v~~~~~spdg~~l~ 356 (1012)
.-+++..++. .+.+|+...+-....+..+ ..+.-.+...|.++.++
T Consensus 355 ~rFissSDdk--s~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~ 401 (503)
T KOG0282|consen 355 RRFISSSDDK--SVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFA 401 (503)
T ss_pred ceEeeeccCc--cEEEEEcCCCccchhhcchhhccCcceecCCCCCeeh
Confidence 4455555554 4555555333222222222 11222334566666533
No 367
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=87.11 E-value=0.6 Score=52.59 Aligned_cols=47 Identities=13% Similarity=-0.025 Sum_probs=39.2
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKP 870 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~ 870 (1012)
..|+||+||++|.-|++..+.+++.++... ...++++++.+|.+...
T Consensus 270 ~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~---------~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 270 DIPILFIHSKGDCVCSYEGTVSFYNKLSIS---------NKELHTLEDMDHVITIE 316 (332)
T ss_pred CCCEEEEEeCCCCccCHHHHHHHHHhccCC---------CcEEEEECCCCCCCccC
Confidence 489999999999999999988887765543 45778899999998754
No 368
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=87.01 E-value=3 Score=45.43 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=31.7
Q ss_pred CC-CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 813 KQ-YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 813 ~~-~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
++ ..|+|+|.|++|.-+|+...++|.+.+. ..+++..+ .||..
T Consensus 208 ~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~-----------~~~~~~l~-~gH~p 251 (273)
T PLN02211 208 DIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP-----------PSQVYELE-SDHSP 251 (273)
T ss_pred ccCccceEEEEeCCCCCCCHHHHHHHHHhCC-----------ccEEEEEC-CCCCc
Confidence 44 5799999999999999988888765432 12445554 89974
No 369
>KOG0273|consensus
Probab=86.98 E-value=1.8 Score=48.57 Aligned_cols=64 Identities=17% Similarity=0.166 Sum_probs=49.8
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
+...+.++++||||+++|+....+ .+.+++..+++..+.-.....+..++|+-+|..|.-...+
T Consensus 451 H~~pVysvafS~~g~ylAsGs~dg-----~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd 514 (524)
T KOG0273|consen 451 HQEPVYSVAFSPNGRYLASGSLDG-----CVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASD 514 (524)
T ss_pred CCCceEEEEecCCCcEEEecCCCC-----eeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecC
Confidence 455788999999999999865432 6888999999987655555556889999999888766543
No 370
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=86.84 E-value=0.56 Score=51.25 Aligned_cols=59 Identities=20% Similarity=0.253 Sum_probs=46.8
Q ss_pred hHcCCCCCCCCCCCCCCCCCC-CceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 795 LLGYSPLHNIQGPNELKGKQY-PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 795 ~~~~Sp~~~v~~~~~~~~~~~-~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+....+...+. ++. .|+|++||.+|..||..+++.+|.+.+.. |...+++++.+|....
T Consensus 218 ~~~~d~~~~~~-------~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~---------~~~~~~~~~~~H~~~~ 277 (299)
T COG1073 218 LLLLDPFDDAE-------KISPRPVLLVHGERDEVVPLRDAEDLYEAARER---------PKKLLFVPGGGHIDLY 277 (299)
T ss_pred hccCcchhhHh-------hcCCcceEEEecCCCcccchhhhHHHHhhhccC---------CceEEEecCCcccccc
Confidence 33444445555 555 69999999999999999999999999886 6677888888898764
No 371
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=86.72 E-value=0.42 Score=56.21 Aligned_cols=44 Identities=9% Similarity=0.079 Sum_probs=36.7
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
+++.|+||++|++|.-+|+..+..|.+.+. -+++++.++.||..
T Consensus 416 ~I~vPtLII~Ge~D~ivP~~~~~~la~~iP-----------~a~l~vI~~aGH~~ 459 (481)
T PLN03087 416 QLKCDVAIFHGGDDELIPVECSYAVKAKVP-----------RARVKVIDDKDHIT 459 (481)
T ss_pred hCCCCEEEEEECCCCCCCHHHHHHHHHhCC-----------CCEEEEeCCCCCcc
Confidence 577999999999999999999888755542 35788999999973
No 372
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=86.68 E-value=66 Score=36.93 Aligned_cols=203 Identities=14% Similarity=0.102 Sum_probs=104.7
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCC-CCCcc-cCCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEP-KSKSK-KHSKKN 235 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~-~~~g~-~~~~~~ 235 (1012)
.-....++++|+++.-.... ...+.++|+++.........+.....++|+||++.+|...... ..... .+...+
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~----~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~ 150 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGD----SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATN 150 (381)
T ss_pred cccceeeCCCCCeEEEecCC----CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCC
Confidence 34467889999877544322 2378999977766544222222346789999999887765421 10000 111111
Q ss_pred ceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcE--EeeccCCCceeeeeEEecCCEEEEE
Q psy1288 236 RSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWK--TLIEENKDDVLDWATCVANDKLILS 313 (1012)
Q Consensus 236 ~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~l~~~ 313 (1012)
. +....+.+..+ ....++|+|..+|+.. .....|..++.......... ..+..... ........++..+++.
T Consensus 151 ~-~~~~~~vG~~P-~~~a~~p~g~~vyv~~---~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~-P~~i~v~~~g~~~yV~ 224 (381)
T COG3391 151 K-VTATIPVGNTP-TGVAVDPDGNKVYVTN---SDDNTVSVIDTSGNSVVRGSVGSLVGVGTG-PAGIAVDPDGNRVYVA 224 (381)
T ss_pred e-EEEEEecCCCc-ceEEECCCCCeEEEEe---cCCCeEEEEeCCCcceeccccccccccCCC-CceEEECCCCCEEEEE
Confidence 1 11112222112 2235889999888876 23556778876543310000 01111111 1111222344566666
Q ss_pred EEcCceEEEEEEecCCCceeee-ecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 314 YIHHVKNVMHLHDLASGKHLYT-FPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 314 ~~~~g~~~l~~~dl~~G~~~~~-l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
...+....+..++..++..... .+...........+|+|+.+++..+. ...++.+|.
T Consensus 225 ~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~---~~~V~vid~ 282 (381)
T COG3391 225 NDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ---GGTVSVIDG 282 (381)
T ss_pred eccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC---CCeEEEEeC
Confidence 5544345778888866543221 12211122245678999887766544 567888887
No 373
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=86.56 E-value=10 Score=40.59 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=31.9
Q ss_pred CceEEEcccCCC--------CCCCc--chHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 816 PATLLMTADHDD--------RVSPV--HSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 816 ~p~l~~~g~~D~--------rv~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
-|+||+-..-.. .|-+. .-.+||.+++. |..+++-++.||-
T Consensus 155 ~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~----------p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 155 MPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKP----------PSWHFVAKDYGHM 205 (259)
T ss_pred CCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCC----------CEEEEEeCCCCch
Confidence 899999877773 44443 55789998855 8889999999997
No 374
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=86.44 E-value=0.72 Score=52.98 Aligned_cols=49 Identities=18% Similarity=0.178 Sum_probs=41.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCC-CCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETK-AGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gH~~~ 868 (1012)
+++.|+|||+|++|..+|+.++.++.+.++..+. .+.+++.++ .||-..
T Consensus 321 ~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~-------~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 321 NIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGK-------YAEVYEIESINGHMAG 370 (389)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCC-------CeEEEEECCCCCcchh
Confidence 5569999999999999999999999888876544 678888875 899753
No 375
>KOG1282|consensus
Probab=86.39 E-value=1.9 Score=49.93 Aligned_cols=117 Identities=13% Similarity=0.110 Sum_probs=69.0
Q ss_pred CCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChh----------------HHHHHHhCCeEEEEEcCCCC
Q psy1288 410 SKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVT----------------KIVFLRDFNGIYAIPNIRGG 473 (1012)
Q Consensus 410 s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~----------------~~~~l~~~G~~v~~~d~RG~ 473 (1012)
...|+.+.++.+.... .....|+||++-||++.+...++..+ -..|-. -..++..|.+-+
T Consensus 53 ~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk--~aNiLfLd~PvG 128 (454)
T KOG1282|consen 53 ESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNK--EANILFLDQPVG 128 (454)
T ss_pred CCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccc--cccEEEEecCCc
Confidence 3468889888886653 34567999999999987643222100 012221 234555566655
Q ss_pred CCCchhHHhhhhcCCCcchHhHHHHH-HHHHHHcCCCCCCcEEEEecChHHHHHHHHH
Q psy1288 474 GEYGERWHDGGRLLNKQNVFDDFQCA-AEYLIASGYTQSSRLAIQGGSNGGLLTAACI 530 (1012)
Q Consensus 474 g~~g~~~~~~~~~~~~~~~~~D~~a~-~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~ 530 (1012)
.||.-.-........-..+..|...+ .+|+.+.+.-....+.|.|.|++|.-+-.++
T Consensus 129 vGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La 186 (454)
T KOG1282|consen 129 VGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALA 186 (454)
T ss_pred CCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHH
Confidence 55533211111111222334565544 5788888887888999999999997665444
No 376
>KOG1273|consensus
Probab=86.18 E-value=54 Score=35.49 Aligned_cols=60 Identities=15% Similarity=0.235 Sum_probs=38.6
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEE
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~ 220 (1012)
-..+.+.+||+||+.|+-++ ++ ..|-++|+..|..+....-.....+..|.|-.+..+..
T Consensus 65 ~~pi~sl~WS~dgr~LltsS-~D----~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va 124 (405)
T KOG1273|consen 65 VRPITSLCWSRDGRKLLTSS-RD----WSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVA 124 (405)
T ss_pred ccceeEEEecCCCCEeeeec-CC----ceeEEEeccCCCceeEEEccCccceeeeccccCCeEEE
Confidence 34688999999999987443 22 36889999888865432222234556777755444443
No 377
>KOG0282|consensus
Probab=85.74 E-value=37 Score=38.75 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=42.5
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
..+.+..||++|..++=. +. ...|.++|++||+.+.--..+.-..-+.+.||+..++++.
T Consensus 259 k~Vrd~~~s~~g~~fLS~-sf----D~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 259 KPVRDASFNNCGTSFLSA-SF----DRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred hhhhhhhccccCCeeeee-ec----ceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEe
Confidence 467799999999987633 22 2479999999999765222222246678899997777765
No 378
>KOG2106|consensus
Probab=85.58 E-value=11 Score=42.90 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=43.1
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
....+.|-| .||..... | ..+|+|.++....++...+...+-+++||||..|+..+.+
T Consensus 411 ~~~~fhpsg-~va~Gt~~-G----~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d 468 (626)
T KOG2106|consen 411 ECADFHPSG-VVAVGTAT-G----RWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD 468 (626)
T ss_pred eEeeccCcc-eEEEeecc-c----eEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC
Confidence 456788888 66665443 3 6889999987766555555556889999999999887765
No 379
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=85.50 E-value=44 Score=43.07 Aligned_cols=53 Identities=8% Similarity=0.012 Sum_probs=32.0
Q ss_pred CEEEEEEEcCceEEEEEEecCCCceeeeecCC----ceEEEeecccccCcEEEEEecC
Q psy1288 308 DKLILSYIHHVKNVMHLHDLASGKHLYTFPLD----VGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 308 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~----~~~v~~~~~spdg~~l~~~~ss 361 (1012)
+.|....+......+..+.. +|-....++++ ...+..+.|+.|++.|++....
T Consensus 269 ~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~ 325 (928)
T PF04762_consen 269 NLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED 325 (928)
T ss_pred CEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC
Confidence 33443444444556666665 45444444433 3456788999999988887743
No 380
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=85.03 E-value=3.1 Score=43.48 Aligned_cols=89 Identities=13% Similarity=0.115 Sum_probs=42.9
Q ss_pred EEEEcCCCCCCCCCCcChhHHHHHHhCCeE---EEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCC
Q psy1288 435 ILYGYGGFAVSLQPGFSVTKIVFLRDFNGI---YAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511 (1012)
Q Consensus 435 vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~---v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~ 511 (1012)
||++||-.. .....|... ...|.++||. ++..++-..... ....... ........+.+.++.+.+. +..
T Consensus 4 VVlVHG~~~-~~~~~w~~~-~~~l~~~GY~~~~vya~tyg~~~~~--~~~~~~~--~~~~~~~~l~~fI~~Vl~~--TGa 75 (219)
T PF01674_consen 4 VVLVHGTGG-NAYSNWSTL-APYLKAAGYCDSEVYALTYGSGNGS--PSVQNAH--MSCESAKQLRAFIDAVLAY--TGA 75 (219)
T ss_dssp EEEE--TTT-TTCGGCCHH-HHHHHHTT--CCCEEEE--S-CCHH--THHHHHH--B-HHHHHHHHHHHHHHHHH--HT-
T ss_pred EEEECCCCc-chhhCHHHH-HHHHHHcCCCcceeEeccCCCCCCC--Ccccccc--cchhhHHHHHHHHHHHHHh--hCC
Confidence 667899653 223456554 3455667998 799888443321 1111111 1111223344444444433 445
Q ss_pred CcEEEEecChHHHHHHHHHhh
Q psy1288 512 SRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 512 ~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
+|-|+|||+||.++-..+..
T Consensus 76 -kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 -KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp --EEEEEETCHHHHHHHHHHH
T ss_pred -EEEEEEcCCcCHHHHHHHHH
Confidence 89999999999988777654
No 381
>KOG3967|consensus
Probab=84.99 E-value=11 Score=38.31 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=41.7
Q ss_pred hCCeEEEEEcCCCCCCCchhHHhhhh--cCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCC
Q psy1288 460 DFNGIYAIPNIRGGGEYGERWHDGGR--LLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPD 535 (1012)
Q Consensus 460 ~~G~~v~~~d~RG~g~~g~~~~~~~~--~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 535 (1012)
..||-|++.|.--. +.+++.-. ........+-+.-...+++. ...+..+++..||+||++++.++.+.|+
T Consensus 142 ~~Gygviv~N~N~~----~kfye~k~np~kyirt~veh~~yvw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 142 AEGYGVIVLNPNRE----RKFYEKKRNPQKYIRTPVEHAKYVWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred HcCCcEEEeCCchh----hhhhhcccCcchhccchHHHHHHHHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcCC
Confidence 35888888775421 22333211 11112233333333333333 3567889999999999999999998876
No 382
>KOG2315|consensus
Probab=84.77 E-value=21 Score=41.39 Aligned_cols=96 Identities=8% Similarity=0.039 Sum_probs=58.0
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCce
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNRS 237 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~ 237 (1012)
-+.+++|||+|+-.+...-.- -..+-++|+++.-. -+..++. -..+-|+|-|+.|++..-.. -.| +.
T Consensus 272 PVhdv~W~~s~~EF~VvyGfM---PAkvtifnlr~~~v-~df~egp-RN~~~fnp~g~ii~lAGFGN-L~G-------~m 338 (566)
T KOG2315|consen 272 PVHDVTWSPSGREFAVVYGFM---PAKVTIFNLRGKPV-FDFPEGP-RNTAFFNPHGNIILLAGFGN-LPG-------DM 338 (566)
T ss_pred CceEEEECCCCCEEEEEEecc---cceEEEEcCCCCEe-EeCCCCC-ccceEECCCCCEEEEeecCC-CCC-------ce
Confidence 467899999999887665332 23566778765433 2222232 25689999999888876431 111 12
Q ss_pred EEEEeec-------cccceeeeeeecCCCEEEEEEC
Q psy1288 238 SAYHLTV-------NVAPITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 238 l~~~~~~-------~~~~i~~~~~s~dg~~l~~~tn 266 (1012)
-+++... +..+-.+..|+|||.+|+..+.
T Consensus 339 EvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATT 374 (566)
T KOG2315|consen 339 EVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATT 374 (566)
T ss_pred EEEeccchhhccccccCCceEEEEcCCCcEEEEEec
Confidence 2233221 1123345679999998887764
No 383
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.66 E-value=2.6 Score=49.11 Aligned_cols=115 Identities=12% Similarity=0.127 Sum_probs=64.1
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc---------------------ChhHHHHHHhCCeEEEEEcC
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF---------------------SVTKIVFLRDFNGIYAIPNI 470 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------------------~~~~~~~l~~~G~~v~~~d~ 470 (1012)
.+..+.++.+.... .....|+|+++-||++.+...++ ...-..|.. -..++.+|.
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~anllfiDq 123 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTK--MANIIFLDQ 123 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhh--cCcEEEecC
Confidence 35667777776543 34578999999999875532110 001123433 356677787
Q ss_pred CCCCCCchhHHhhhhcCCCcchHhHHHHHH-HHHHHcCCCCCCcEEEEecChHHHHHHHHHh
Q psy1288 471 RGGGEYGERWHDGGRLLNKQNVFDDFQCAA-EYLIASGYTQSSRLAIQGGSNGGLLTAACIN 531 (1012)
Q Consensus 471 RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~-~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 531 (1012)
.-+.||...-.... ...-....+|+...+ .|+...+......+.|.|.|+||..+..++.
T Consensus 124 PvGtGfSy~~~~~~-~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~ 184 (433)
T PLN03016 124 PVGSGFSYSKTPID-KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQ 184 (433)
T ss_pred CCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHH
Confidence 66666643211111 000011224555444 4555555555678999999999986655543
No 384
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=84.46 E-value=3 Score=45.54 Aligned_cols=47 Identities=15% Similarity=0.092 Sum_probs=30.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHH------HHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFA------ATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
++..|+|+++|+.|+-.+ ++. +..+++-. ...+.++++++.||-++.
T Consensus 205 ~~~~P~ll~~g~~D~~~~-----~~~~~~~~~~~~~~~l~-----~~~v~~~~~~~~~H~l~~ 257 (274)
T TIGR03100 205 RFQGPVLFILSGNDLTAQ-----EFADSVLGEPAWRGALE-----DPGIERVEIDGADHTFSD 257 (274)
T ss_pred hcCCcEEEEEcCcchhHH-----HHHHHhccChhhHHHhh-----cCCeEEEecCCCCccccc
Confidence 456899999999998642 232 22222110 015789999999996643
No 385
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=84.43 E-value=2.2 Score=44.80 Aligned_cols=50 Identities=20% Similarity=0.218 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCC----CceeEEEEccC
Q psy1288 496 FQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRP----DLFGAAIVQVG 545 (1012)
Q Consensus 496 ~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p----~~f~a~v~~~~ 545 (1012)
...|++|+.......+..|.+.|||.||.++..++...+ +++..+....+
T Consensus 68 q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDg 121 (224)
T PF11187_consen 68 QKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeC
Confidence 345566665543333456999999999999988877643 34555555444
No 386
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=84.33 E-value=0.78 Score=50.68 Aligned_cols=53 Identities=13% Similarity=0.024 Sum_probs=42.7
Q ss_pred CCCCCceEEEcccCCCCCC-CcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCchh
Q psy1288 812 GKQYPATLLMTADHDDRVS-PVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTK 873 (1012)
Q Consensus 812 ~~~~~p~l~~~g~~D~rv~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 873 (1012)
.++..|+||+||+.|.-|+ ...+.++++++... -+.++++++..|.+......
T Consensus 225 ~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~---------~~~~~~~~g~~He~~~E~~~ 278 (298)
T COG2267 225 PAIALPVLLLQGGDDRVVDNVEGLARFFERAGSP---------DKELKVIPGAYHELLNEPDR 278 (298)
T ss_pred ccccCCEEEEecCCCccccCcHHHHHHHHhcCCC---------CceEEecCCcchhhhcCcch
Confidence 3788999999999999999 77777777776654 36899999999997644344
No 387
>KOG2919|consensus
Probab=84.28 E-value=14 Score=40.01 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=59.9
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC-CCCceec--eeecc------eeeeeeEEeeC-CCeEEEEecCCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV-ATGKEYP--EVLHR------LKFVSIAWTHD-HKGVFYSNQEPKSK 227 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl-~tg~~~~--~t~~~------~~~~~~~WSpD-G~~l~y~~~~~~~~ 227 (1012)
..-+++|||||.+|.-.- ...|+++|+ ..|..-+ .+... .-.+.++++|- .+.++.-+-. ...
T Consensus 160 aAhsL~Fs~DGeqlfaGy------krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~-q~~ 232 (406)
T KOG2919|consen 160 AAHSLQFSPDGEQLFAGY------KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG-QRV 232 (406)
T ss_pred hheeEEecCCCCeEeecc------cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeeccc-cee
Confidence 345789999999986432 247999998 4554221 11111 12466788884 4445443311 101
Q ss_pred cccCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCC
Q psy1288 228 SKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNF 282 (1012)
Q Consensus 228 g~~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~ 282 (1012)
|. -.......++..-....+|+...|.+||.+|+.-+..+ -+|...|+...
T Consensus 233 gi-y~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~---dkIl~WDiR~~ 283 (406)
T KOG2919|consen 233 GI-YNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKD---DKILCWDIRYS 283 (406)
T ss_pred ee-EecCCCCceeeecccCCCeeeEEeccCcCeecccccCC---CeEEEEeehhc
Confidence 11 00000011111111114566666999999988876543 46777787653
No 388
>KOG1515|consensus
Probab=84.21 E-value=1 Score=50.26 Aligned_cols=51 Identities=24% Similarity=0.212 Sum_probs=45.8
Q ss_pred CCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 809 ELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 809 ~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
...|.--+|+||+.++.|.-. -++..++++|++.|+ +++++.+++++||+-
T Consensus 262 d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv-------~v~~~~~e~~~H~~~ 312 (336)
T KOG1515|consen 262 DLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV-------EVTLIHYEDGFHGFH 312 (336)
T ss_pred CccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC-------eEEEEEECCCeeEEE
Confidence 456788899999999999877 799999999999999 999889999999975
No 389
>PLN02965 Probable pheophorbidase
Probab=83.96 E-value=0.8 Score=49.28 Aligned_cols=45 Identities=11% Similarity=0.161 Sum_probs=35.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+|+++|++|.-||+..+++|.+.+. ..+++++++.||.+.
T Consensus 191 ~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~-----------~a~~~~i~~~GH~~~ 235 (255)
T PLN02965 191 AEKVPRVYIKTAKDNLFDPVRQDVMVENWP-----------PAQTYVLEDSDHSAF 235 (255)
T ss_pred cCCCCEEEEEcCCCCCCCHHHHHHHHHhCC-----------cceEEEecCCCCchh
Confidence 588999999999999999977766653322 246788999999865
No 390
>KOG4388|consensus
Probab=83.82 E-value=1.9 Score=49.74 Aligned_cols=89 Identities=12% Similarity=0.059 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCC-CCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCC-
Q psy1288 431 NNPCILYGYGGFA-VSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGY- 508 (1012)
Q Consensus 431 ~~P~vv~~hGg~~-~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~- 508 (1012)
..-+|+++|||.- .+.......-..+|....|.-++.+||.-.. .....+..+.+.-+--|++.+..
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAP-----------EaPFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAP-----------EAPFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCC-----------CCCCCcHHHHHHHHHHHHhcCHHH
Confidence 3458999999843 3334444455567877789999999986433 33445556777777788888732
Q ss_pred --CCCCcEEEEecChHHHHHHHHH
Q psy1288 509 --TQSSRLAIQGGSNGGLLTAACI 530 (1012)
Q Consensus 509 --~d~~~i~i~G~S~GG~l~~~~~ 530 (1012)
...+||++.|.|+||.+...++
T Consensus 464 lG~TgEriv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 464 LGSTGERIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred hCcccceEEEeccCCCcceeehhH
Confidence 3568999999999998765444
No 391
>COG3150 Predicted esterase [General function prediction only]
Probab=83.60 E-value=20 Score=35.35 Aligned_cols=37 Identities=16% Similarity=-0.043 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 495 DFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 495 D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
...+-++-++... .+ ..++|.|.|.||+.+-++..+.
T Consensus 44 ~a~~ele~~i~~~-~~-~~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 44 QALKELEKAVQEL-GD-ESPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred HHHHHHHHHHHHc-CC-CCceEEeecchHHHHHHHHHHh
Confidence 3344444455442 22 2389999999999999888764
No 392
>KOG0639|consensus
Probab=83.30 E-value=8.9 Score=43.59 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=87.5
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec---eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP---EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~---~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
.+.+..++|||+.|.. |.+..+|-||||++-..+- ++...-.-...+-|||.+ ++|..... .
T Consensus 467 yiRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaCyALa~spDak-vcFsccsd---------G 531 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAK-VCFSCCSD---------G 531 (705)
T ss_pred ceeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccc-eeeeeccC---------C
Confidence 5788999999999976 5567899999998765431 222111124567789976 66665321 1
Q ss_pred CceEEEEee--------ccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCC-ceeeeeEEe
Q psy1288 235 NRSSAYHLT--------VNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKD-DVLDWATCV 305 (1012)
Q Consensus 235 ~~~l~~~~~--------~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~-~~~~~~~~~ 305 (1012)
+..++-... .-..+.....+++||.+|+-- +...-+-..|+..+ +.+..+.-. .++.--..+
T Consensus 532 nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTG----GlDntvRcWDlreg-----rqlqqhdF~SQIfSLg~cP 602 (705)
T KOG0639|consen 532 NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTG----GLDNTVRCWDLREG-----RQLQQHDFSSQIFSLGYCP 602 (705)
T ss_pred cEEEEEcccceeeecccCCCCCceeEEecCCCceeecC----CCccceeehhhhhh-----hhhhhhhhhhhheecccCC
Confidence 111111000 000223333466777666542 22333444555433 222222211 112211233
Q ss_pred cCCEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEE
Q psy1288 306 ANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEI 355 (1012)
Q Consensus 306 ~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l 355 (1012)
.++.+.+.... +++++... ++..+..+.....-|-.+-|++-|+.+
T Consensus 603 ~~dWlavGMen---s~vevlh~-skp~kyqlhlheScVLSlKFa~cGkwf 648 (705)
T KOG0639|consen 603 TGDWLAVGMEN---SNVEVLHT-SKPEKYQLHLHESCVLSLKFAYCGKWF 648 (705)
T ss_pred Cccceeeeccc---CcEEEEec-CCccceeecccccEEEEEEecccCcee
Confidence 44555554432 45566665 555556666655556567777777653
No 393
>KOG4499|consensus
Probab=82.96 E-value=27 Score=36.23 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=36.4
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCc----eEEEEEEECCCCceeceeeccee-eeeeEEeeCCCeEEEEe
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSD----WTSMHFKDVATGKEYPEVLHRLK-FVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~----~~~L~v~dl~tg~~~~~t~~~~~-~~~~~WSpDG~~l~y~~ 221 (1012)
-+..+..++||||+.+=+....|.+ ...||.+-+ +++.... ..... -.++.|+-|-|.+||+.
T Consensus 109 nR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i-~~~v~IsNgl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQVELI-WNCVGISNGLAWDSDAKKFYYID 176 (310)
T ss_pred cccccCccCCCCceeeeeeccccccccccccEEEEecc-CCCceee-ehhccCCccccccccCcEEEEEc
Confidence 4566788999999965555544432 125555443 3433211 11111 14578998888888874
No 394
>PRK07581 hypothetical protein; Validated
Probab=82.76 E-value=0.89 Score=51.33 Aligned_cols=44 Identities=20% Similarity=0.103 Sum_probs=34.6
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCC-CCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETK-AGHGG 867 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gH~~ 867 (1012)
+|+.|+|||+|++|.-+|+..+..+.+.+. .+++++.++ .||-.
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip-----------~a~l~~i~~~~GH~~ 317 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIP-----------NAELRPIESIWGHLA 317 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCC-----------CCeEEEeCCCCCccc
Confidence 455999999999999999988877755442 246778898 89954
No 395
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=82.62 E-value=15 Score=39.44 Aligned_cols=37 Identities=19% Similarity=0.174 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 495 DFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 495 D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
-+..++.+|.++-. -.++-++||||||......+..+
T Consensus 88 wl~~vl~~L~~~Y~--~~~~N~VGHSmGg~~~~~yl~~~ 124 (255)
T PF06028_consen 88 WLKKVLKYLKKKYH--FKKFNLVGHSMGGLSWTYYLENY 124 (255)
T ss_dssp HHHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC--CCEEeEEEECccHHHHHHHHHHh
Confidence 45556677766633 46899999999999988877663
No 396
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=82.61 E-value=1.7 Score=44.74 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=33.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
++..|+|+++|++|..+|.... +.+++..- .++++++|+.||..
T Consensus 174 ~~~~pvl~i~g~~D~~~~~~~~----~~~~~~~~-------~~~~~~~~~~gH~~ 217 (228)
T PF12697_consen 174 RIKVPVLVIHGEDDPIVPPESA----EELADKLP-------NAELVVIPGAGHFL 217 (228)
T ss_dssp GSSSEEEEEEETTSSSSHHHHH----HHHHHHST-------TEEEEEETTSSSTH
T ss_pred ccCCCeEEeecCCCCCCCHHHH----HHHHHHCC-------CCEEEEECCCCCcc
Confidence 5569999999999999994444 44444333 57899999999974
No 397
>PRK00870 haloalkane dehalogenase; Provisional
Probab=82.61 E-value=1.1 Score=49.71 Aligned_cols=47 Identities=13% Similarity=-0.084 Sum_probs=34.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+|||+|++|+-||... .+|...+... . -+.++++++.||...
T Consensus 237 ~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~-~-------~~~~~~i~~~gH~~~ 283 (302)
T PRK00870 237 RWDKPFLTAFSDSDPITGGGD-AILQKRIPGA-A-------GQPHPTIKGAGHFLQ 283 (302)
T ss_pred cCCCceEEEecCCCCcccCch-HHHHhhcccc-c-------ccceeeecCCCccch
Confidence 678999999999999999744 6655544421 0 124668899999864
No 398
>KOG2984|consensus
Probab=82.28 E-value=1.1 Score=44.77 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=34.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+||+||+.|+.|+-.+..=+ ..++. -.++.++|+.+|-+-
T Consensus 214 ~vkcPtli~hG~kDp~~~~~hv~fi-~~~~~----------~a~~~~~peGkHn~h 258 (277)
T KOG2984|consen 214 QVKCPTLIMHGGKDPFCGDPHVCFI-PVLKS----------LAKVEIHPEGKHNFH 258 (277)
T ss_pred cccCCeeEeeCCcCCCCCCCCccch-hhhcc----------cceEEEccCCCccee
Confidence 5779999999999999998877644 33322 246778899999764
No 399
>PRK06489 hypothetical protein; Provisional
Probab=82.25 E-value=1.1 Score=51.11 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=34.6
Q ss_pred CCCCceEEEcccCCCCCCCcch--HHHHHHHHHHhcCCCCCCCCEEEEEeCCC----CCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHS--LKFAATLQEKLRDYPHQTNPLLIRIETKA----GHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----gH~~~ 868 (1012)
+|+.|+|||+|++|..+|+.++ +++...+. ..+++++|+. ||...
T Consensus 290 ~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip-----------~a~l~~i~~a~~~~GH~~~ 340 (360)
T PRK06489 290 KIKAPVLAINSADDERNPPETGVMEAALKRVK-----------HGRLVLIPASPETRGHGTT 340 (360)
T ss_pred hCCCCEEEEecCCCcccChhhHHHHHHHHhCc-----------CCeEEEECCCCCCCCcccc
Confidence 6789999999999999998876 45533331 3478888986 99764
No 400
>PLN02209 serine carboxypeptidase
Probab=82.21 E-value=3.6 Score=47.90 Aligned_cols=115 Identities=14% Similarity=0.201 Sum_probs=64.0
Q ss_pred CCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCc---------C------------hhHHHHHHhCCeEEEEEc
Q psy1288 411 KDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF---------S------------VTKIVFLRDFNGIYAIPN 469 (1012)
Q Consensus 411 ~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~---------~------------~~~~~~l~~~G~~v~~~d 469 (1012)
..|..+.++.+.... .....|+++++-||++.+...+. . ..-..|.. -..++.+|
T Consensus 49 ~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~--~anllfiD 124 (437)
T PLN02209 49 EENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTK--TANIIFLD 124 (437)
T ss_pred CCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhh--cCcEEEec
Confidence 346667777765443 24568999999999876543211 0 01113333 24667778
Q ss_pred CCCCCCCchhHHhhhhcCCCcchHhHHHHHHH-HHHHcCCCCCCcEEEEecChHHHHHHHHH
Q psy1288 470 IRGGGEYGERWHDGGRLLNKQNVFDDFQCAAE-YLIASGYTQSSRLAIQGGSNGGLLTAACI 530 (1012)
Q Consensus 470 ~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~ 530 (1012)
..-+.||...-..... ..-....+|+...+. |+...+......+.|.|.|+||..+..++
T Consensus 125 qPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a 185 (437)
T PLN02209 125 QPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALV 185 (437)
T ss_pred CCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHH
Confidence 7766666432111111 111123355655553 44444555556899999999997665544
No 401
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=82.11 E-value=3.9 Score=43.37 Aligned_cols=96 Identities=10% Similarity=0.079 Sum_probs=49.8
Q ss_pred CCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCC--eEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcC
Q psy1288 430 GNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFN--GIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASG 507 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G--~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~ 507 (1012)
....++|++||-... ..... ....++....| ..++.+.....+..-. +..+. ........++...+..|...
T Consensus 16 ~~~~vlvfVHGyn~~-f~~a~-~r~aql~~~~~~~~~~i~FsWPS~g~~~~-Y~~d~--~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNS-FEDAL-RRAAQLAHDLGFPGVVILFSWPSDGSLLG-YFYDR--ESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCCCC-HHHHH-HHHHHHHHHhCCCceEEEEEcCCCCChhh-hhhhh--hhHHHHHHHHHHHHHHHHhc-
Confidence 345799999995321 11110 11222333333 2677777776554211 11110 01111223344444444443
Q ss_pred CCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 508 YTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 508 ~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
....+|-|++||||+.+++.++..
T Consensus 90 -~~~~~I~ilaHSMG~rv~~~aL~~ 113 (233)
T PF05990_consen 90 -PGIKRIHILAHSMGNRVLLEALRQ 113 (233)
T ss_pred -cCCceEEEEEeCchHHHHHHHHHH
Confidence 346799999999999998877654
No 402
>KOG0303|consensus
Probab=82.06 E-value=25 Score=39.03 Aligned_cols=65 Identities=12% Similarity=0.133 Sum_probs=47.4
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
+..+++.++|.|--.-+++++.- .+.+.+||+.+|+.+-......-..+++|+-||+.|+-+..+
T Consensus 130 H~rrVg~V~wHPtA~NVLlsag~----Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD 194 (472)
T KOG0303|consen 130 HQRRVGLVQWHPTAPNVLLSAGS----DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD 194 (472)
T ss_pred cceeEEEEeecccchhhHhhccC----CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc
Confidence 45688999999988887776542 248999999999975322223335789999999988766544
No 403
>KOG2919|consensus
Probab=82.01 E-value=22 Score=38.48 Aligned_cols=48 Identities=10% Similarity=0.054 Sum_probs=30.2
Q ss_pred EEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 324 LHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 324 ~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
++.-.++.....+-...+.|..+.|-+||+.++. +.+.-..|..+|+.
T Consensus 234 iy~~~~~~pl~llggh~gGvThL~~~edGn~lfs---GaRk~dkIl~WDiR 281 (406)
T KOG2919|consen 234 IYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFS---GARKDDKILCWDIR 281 (406)
T ss_pred eEecCCCCceeeecccCCCeeeEEeccCcCeecc---cccCCCeEEEEeeh
Confidence 3333334444444433677888999999998763 33444567788874
No 404
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=81.89 E-value=1.4 Score=50.14 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=39.2
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEE-eCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRI-ETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~gH~~~ 868 (1012)
+|+.|+|||+|++|.-+|+..+++|.+.+..... -++|+. .++.||...
T Consensus 286 ~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~-------~v~~~~i~~~~GH~~~ 335 (351)
T TIGR01392 286 RIKAPFLVVSITSDWLFPPAESRELAKALPAAGL-------RVTYVEIESPYGHDAF 335 (351)
T ss_pred hCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCC-------ceEEEEeCCCCCcchh
Confidence 5669999999999999999999999998876533 444544 468999754
No 405
>KOG0288|consensus
Probab=81.68 E-value=1.8 Score=47.85 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=42.3
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eee--cceeeeeeEEeeCCCeEEEEe
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVL--HRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~--~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.....|||||.++|-+... ..||||++.+|+... +.. .+....+.+|.|-|++++-..
T Consensus 390 wtrvvfSpd~~YvaAGS~d-----gsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsad 450 (459)
T KOG0288|consen 390 WTRVVFSPDGSYVAAGSAD-----GSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSAD 450 (459)
T ss_pred cceeEECCCCceeeeccCC-----CcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence 5678999999999975443 379999999998643 222 222367899999998876544
No 406
>PRK03592 haloalkane dehalogenase; Provisional
Probab=81.53 E-value=1.4 Score=48.48 Aligned_cols=46 Identities=13% Similarity=0.062 Sum_probs=34.4
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+|||+|++|.-+++.+..++...+-. ..++++.++.||...
T Consensus 226 ~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----------~~~~~~i~~~gH~~~ 271 (295)
T PRK03592 226 TSDVPKLLINAEPGAILTTGAIRDWCRSWPN----------QLEITVFGAGLHFAQ 271 (295)
T ss_pred cCCCCeEEEeccCCcccCcHHHHHHHHHhhh----------hcceeeccCcchhhh
Confidence 5789999999999999977666555333221 246778899999875
No 407
>PRK13613 lipoprotein LpqB; Provisional
Probab=81.52 E-value=74 Score=38.77 Aligned_cols=161 Identities=13% Similarity=0.117 Sum_probs=81.5
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce----eceeecceeeeeeEEeeCCCeEEEEecCCCCCc--c--
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE----YPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKS--K-- 229 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~----~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g--~-- 229 (1012)
.+.++.+|+||+.+|+... . ...|++-.+.++.. ............|+|.++| .+. +.+...... .
T Consensus 364 ~~~s~avS~~g~~~A~v~~-~---~~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vW-tvd~~~~~~~vl~v 437 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA-D---GDSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLW-VVDRDPADPRLLWL 437 (599)
T ss_pred CccceEEcCCCceEEEEcC-C---CcEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEE-EecCCCCCceEEEE
Confidence 5678999999999999843 1 24788876644433 1122333445778887777 443 322210000 0
Q ss_pred -cCCCCCceEEEEeeccc--cceeeeeeecCCCEEEEEECCCCCCceEEE--EeCCC-Cc--ccCcEEeeccCCCceeee
Q psy1288 230 -KHSKKNRSSAYHLTVNV--APITSQYITNEGPQFVFKTNKDAPNYRLIT--IDFDN-FA--ESNWKTLIEENKDDVLDW 301 (1012)
Q Consensus 230 -~~~~~~~~l~~~~~~~~--~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~--~dl~~-~~--~~~~~~l~~~~~~~~~~~ 301 (1012)
...++... ...... ..|....+|+||-+++++...+. ..+|+. +--.. +. ....+.+.+... . ...
T Consensus 438 ~~~~G~~~~---V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g-~~~v~va~V~R~~~G~~~l~~~~~l~~~l~-~-v~~ 511 (599)
T PRK13613 438 LQGDGEPVE---VRTPELDGHRVVAVRVARDGVRVALIVEKDG-RRSLQIGRIVRDAKAVVSVEEFRSLAPELE-D-VTD 511 (599)
T ss_pred EcCCCcEEE---eeccccCCCEeEEEEECCCccEEEEEEecCC-CcEEEEEEEEeCCCCcEEeeccEEeccCCC-c-cce
Confidence 00000000 000111 13555568999999999886433 223333 32211 11 111233333322 2 234
Q ss_pred eEEecCCEEEEEE-EcCceEEEEEEecCCCc
Q psy1288 302 ATCVANDKLILSY-IHHVKNVMHLHDLASGK 331 (1012)
Q Consensus 302 ~~~~~~~~l~~~~-~~~g~~~l~~~dl~~G~ 331 (1012)
..|.++..|++.. ...+...+++++++ |.
T Consensus 512 ~~W~~~~sL~Vlg~~~~~~~~v~~v~vd-G~ 541 (599)
T PRK13613 512 MSWAGDSQLVVLGREEGGVQQARYVQVD-GS 541 (599)
T ss_pred eEEcCCCEEEEEeccCCCCcceEEEecC-Cc
Confidence 4555557776643 34446778888984 53
No 408
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=81.41 E-value=1.5 Score=47.89 Aligned_cols=58 Identities=22% Similarity=0.274 Sum_probs=43.7
Q ss_pred hhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 792 FEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 792 ~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
.++++.-|.+..+. +|++|+||||+.+||.+++.-=.+. ..+ ..- -|+|...+..||=
T Consensus 258 ~dYYr~aSs~~~L~-------~Ir~PtLii~A~DDP~~~~~~iP~~-~~~--~np-------~v~l~~t~~GGHv 315 (345)
T COG0429 258 EDYYRQASSLPLLP-------KIRKPTLIINAKDDPFMPPEVIPKL-QEM--LNP-------NVLLQLTEHGGHV 315 (345)
T ss_pred HHHHHhcccccccc-------ccccceEEEecCCCCCCChhhCCcc-hhc--CCC-------ceEEEeecCCceE
Confidence 46688999999999 9999999999999999997321111 111 222 5788898888994
No 409
>KOG0265|consensus
Probab=81.26 E-value=64 Score=34.79 Aligned_cols=63 Identities=16% Similarity=0.090 Sum_probs=41.5
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee--ceeecceeeeeeEEeeCCCeEEEEec
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY--PEVLHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~--~~t~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
...-+....|+|||..+|= +|. ..+|++|++.+-..- .+.......-.+.|.+||+.|+-.+.
T Consensus 46 h~geI~~~~F~P~gs~~aS----gG~-Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 46 HKGEIYTIKFHPDGSCFAS----GGS-DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred CcceEEEEEECCCCCeEee----cCC-cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC
Confidence 3456778899999999873 233 358999997654421 12333334567899999987765543
No 410
>PRK13614 lipoprotein LpqB; Provisional
Probab=81.05 E-value=58 Score=39.27 Aligned_cols=162 Identities=10% Similarity=0.083 Sum_probs=77.4
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCC--C------Ccc
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPK--S------KSK 229 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~--~------~g~ 229 (1012)
.+.++.+|+||+.+|+... +...|++... ++.. +....+.....++|.++| ++. +..++. . .|.
T Consensus 344 ~~~s~avS~~g~~~A~~~~----~~~~l~~~~~-g~~~-~~~~~g~~Lt~PS~d~~g-~vW-tv~~g~~~~vv~~~~~g~ 415 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNG----SRTTLYTVSP-GQPA-RALTSGSTLTRPSFSPQD-WVW-TAGPGGNGRIVAYRPTGV 415 (573)
T ss_pred cccceeecCCCceEEEecC----CCcEEEEecC-CCcc-eeeecCCCccCCcccCCC-CEE-EeeCCCCceEEEEecCCC
Confidence 5678999999999999732 2247887765 3333 223333345677777776 343 322211 0 000
Q ss_pred cCCCCCceEEEEee-ccccceeeeeeecCCCEEEEEECCCCCCceEEE--EeCC-CCcccCcEEeeccCC---Cceeeee
Q psy1288 230 KHSKKNRSSAYHLT-VNVAPITSQYITNEGPQFVFKTNKDAPNYRLIT--IDFD-NFAESNWKTLIEENK---DDVLDWA 302 (1012)
Q Consensus 230 ~~~~~~~~l~~~~~-~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~--~dl~-~~~~~~~~~l~~~~~---~~~~~~~ 302 (1012)
.............. .....|....+|+||-+++++...++. .+|+. +--. .+. .+.|..... .......
T Consensus 416 ~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~-~~V~va~V~R~~~G~---P~~L~~~~~~~~~~~~~sl 491 (573)
T PRK13614 416 AEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGK-SRVQVAGIVRNEDGT---PRELTAPITLAADSDADTG 491 (573)
T ss_pred cccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCc-cEEEEEEEEeCCCCC---eEEccCceecccCCCccee
Confidence 00000000000000 001224455689999999998754332 22333 3221 122 223321110 1122334
Q ss_pred EEecCCEEEEEEE-cCceEEEEEEecCCCc
Q psy1288 303 TCVANDKLILSYI-HHVKNVMHLHDLASGK 331 (1012)
Q Consensus 303 ~~~~~~~l~~~~~-~~g~~~l~~~dl~~G~ 331 (1012)
.|.++..|++... .++..+.+++.+..|.
T Consensus 492 ~W~~~~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 492 AWVGDSTVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred EEcCCCEEEEEeccCCCcceEEEEEeCCCC
Confidence 4555567766654 3445667788885444
No 411
>KOG0296|consensus
Probab=80.97 E-value=96 Score=34.36 Aligned_cols=139 Identities=15% Similarity=0.073 Sum_probs=78.4
Q ss_pred CCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee-cce
Q psy1288 125 GLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL-HRL 203 (1012)
Q Consensus 125 ~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~-~~~ 203 (1012)
+++...-||.....+ ..-.++- +..++....||-||.+||= |+-...|.|+...+|..+.... +..
T Consensus 83 GgDD~AflW~~~~ge-~~~eltg-------HKDSVt~~~FshdgtlLAT-----GdmsG~v~v~~~stg~~~~~~~~e~~ 149 (399)
T KOG0296|consen 83 GGDDLAFLWDISTGE-FAGELTG-------HKDSVTCCSFSHDGTLLAT-----GDMSGKVLVFKVSTGGEQWKLDQEVE 149 (399)
T ss_pred CCCceEEEEEccCCc-ceeEecC-------CCCceEEEEEccCceEEEe-----cCCCccEEEEEcccCceEEEeecccC
Confidence 444566777654422 1122222 4568899999999999984 3223378888988887653222 333
Q ss_pred eeeeeEEeeCCCeEEEEecCCCCCcc-cCCCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCC
Q psy1288 204 KFVSIAWTHDHKGVFYSNQEPKSKSK-KHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNF 282 (1012)
Q Consensus 204 ~~~~~~WSpDG~~l~y~~~~~~~~g~-~~~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~ 282 (1012)
...-+.|.|-+..|++-+.++...-. .......+++. ....+.+...+.|||++++.... +..|...++.++
T Consensus 150 dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~---Gh~~~ct~G~f~pdGKr~~tgy~----dgti~~Wn~ktg 222 (399)
T KOG0296|consen 150 DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMS---GHNSPCTCGEFIPDGKRILTGYD----DGTIIVWNPKTG 222 (399)
T ss_pred ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEec---CCCCCcccccccCCCceEEEEec----CceEEEEecCCC
Confidence 34668899988766665554321000 00001111111 01122334457899999888764 456777787776
Q ss_pred c
Q psy1288 283 A 283 (1012)
Q Consensus 283 ~ 283 (1012)
.
T Consensus 223 ~ 223 (399)
T KOG0296|consen 223 Q 223 (399)
T ss_pred c
Confidence 4
No 412
>PRK10985 putative hydrolase; Provisional
Probab=80.82 E-value=1.9 Score=48.35 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=40.1
Q ss_pred hHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 793 EYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 793 ~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
+++...++..... +++.|+|||+|++|+.+++.....+ ++..- .+.+++.++.||-
T Consensus 240 ~~y~~~~~~~~l~-------~i~~P~lii~g~~D~~~~~~~~~~~----~~~~~-------~~~~~~~~~~GH~ 295 (324)
T PRK10985 240 DYYRQCSALPLLN-------QIRKPTLIIHAKDDPFMTHEVIPKP----ESLPP-------NVEYQLTEHGGHV 295 (324)
T ss_pred HHHHHCChHHHHh-------CCCCCEEEEecCCCCCCChhhChHH----HHhCC-------CeEEEECCCCCce
Confidence 3344555555556 8889999999999999997655544 22211 4688889999995
No 413
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=80.81 E-value=2e+02 Score=37.92 Aligned_cols=58 Identities=9% Similarity=0.027 Sum_probs=35.7
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec---------------ceeeeeeEEeeCCCeEEEEe
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH---------------RLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~---------------~~~~~~~~WSpDG~~l~y~~ 221 (1012)
..++++|++..|.++ +.. ..+|+++|..+|......-. -....+++++|||+.||.+.
T Consensus 686 ~gVa~dp~~g~LyVa-d~~---~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVAD 758 (1057)
T PLN02919 686 WDVCFEPVNEKVYIA-MAG---QHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIAD 758 (1057)
T ss_pred eEEEEecCCCeEEEE-ECC---CCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEE
Confidence 367899977665443 332 23799999887765321100 01124589999999887664
No 414
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=80.59 E-value=0.046 Score=58.86 Aligned_cols=44 Identities=20% Similarity=0.101 Sum_probs=27.8
Q ss_pred CCceEEEcccCCCCCCCcch----------HHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHS----------LKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
..++.+..|..|.......+ .++.+.|+.+|+ +..+..++ .+|-
T Consensus 183 ~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-------~~~~~~~~-G~H~ 236 (251)
T PF00756_consen 183 PLRIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKGI-------PHTYHVFP-GGHD 236 (251)
T ss_dssp EEEEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEEC-------TTESEEEH-SESS
T ss_pred CCeEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcCC-------CceEEEec-Cccc
Confidence 36788999999996653322 223333444455 88888887 4674
No 415
>KOG2110|consensus
Probab=80.38 E-value=85 Score=34.81 Aligned_cols=62 Identities=18% Similarity=0.204 Sum_probs=34.9
Q ss_pred CEEEEEEEcCceEEEEEEecCCCceeeeecCC--ceEEEeecccccCcEEEEEecCCCCCcEEEEEe
Q psy1288 308 DKLILSYIHHVKNVMHLHDLASGKHLYTFPLD--VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCN 372 (1012)
Q Consensus 308 ~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~--~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d 372 (1012)
+.++....+.| .-|.++.+.+|+...++.-+ ...+..++|++|+..|..+.++ .--.+|.++
T Consensus 185 G~llATASeKG-TVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T--eTVHiFKL~ 248 (391)
T KOG2110|consen 185 GTLLATASEKG-TVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT--ETVHIFKLE 248 (391)
T ss_pred CCEEEEeccCc-eEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCC--CeEEEEEec
Confidence 44444443333 56777777777655555433 3456788999999865544433 323344443
No 416
>KOG1445|consensus
Probab=80.26 E-value=9.8 Score=44.41 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=44.6
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee-ceeec--ceeeeeeEEeeCCCeEEEEecC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY-PEVLH--RLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~-~~t~~--~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
...+.+++|||||+++|-+... | .|+|++..+++.. +...+ +..-..+.|.=||+.|+.+..+
T Consensus 720 tdqIf~~AWSpdGr~~AtVcKD-g----~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfd 785 (1012)
T KOG1445|consen 720 TDQIFGIAWSPDGRRIATVCKD-G----TLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFD 785 (1012)
T ss_pred cCceeEEEECCCCcceeeeecC-c----eEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEeccc
Confidence 4568899999999999966543 3 7999998877642 21111 1223568999999998888654
No 417
>KOG0302|consensus
Probab=80.22 E-value=23 Score=39.10 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=66.4
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec---eeecceeeeeeEEeeCCCeEEEEecCCCC----C
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP---EVLHRLKFVSIAWTHDHKGVFYSNQEPKS----K 227 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~---~t~~~~~~~~~~WSpDG~~l~y~~~~~~~----~ 227 (1012)
+..++.+++|||..+-+.++.+-+| .|.|+|+..+.... .........-++|+-+-..|++-.+++.. .
T Consensus 256 H~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDL 331 (440)
T KOG0302|consen 256 HTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDL 331 (440)
T ss_pred cccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEh
Confidence 3457889999999999999998877 68999998884332 12223345678998766544444333211 0
Q ss_pred cccC-CCCCceEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeC
Q psy1288 228 SKKH-SKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDF 279 (1012)
Q Consensus 228 g~~~-~~~~~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl 279 (1012)
.... +..-...-||. .+|....|+|.....+..+.. ..++...|+
T Consensus 332 R~~~~~~pVA~fk~Hk----~pItsieW~p~e~s~iaasg~---D~QitiWDl 377 (440)
T KOG0302|consen 332 RQFKSGQPVATFKYHK----APITSIEWHPHEDSVIAASGE---DNQITIWDL 377 (440)
T ss_pred hhccCCCcceeEEecc----CCeeEEEeccccCceEEeccC---CCcEEEEEe
Confidence 0000 00111222333 455555688877766665543 234555554
No 418
>KOG0645|consensus
Probab=80.21 E-value=87 Score=33.37 Aligned_cols=64 Identities=16% Similarity=0.163 Sum_probs=40.9
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecc--eeeeeeEEeeCCCeEEEEecC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHR--LKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~--~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
+...+..++|||.|++||-.+-. .+.-|+.-.+++..- .++++ ...-.++||++|+.|+-.+.+
T Consensus 60 hkrsVRsvAwsp~g~~La~aSFD-----~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD 126 (312)
T KOG0645|consen 60 HKRSVRSVAWSPHGRYLASASFD-----ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD 126 (312)
T ss_pred chheeeeeeecCCCcEEEEeecc-----ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence 45688999999999988865432 133333333444321 23332 235679999999988877654
No 419
>KOG0310|consensus
Probab=80.21 E-value=50 Score=37.80 Aligned_cols=159 Identities=16% Similarity=0.163 Sum_probs=81.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
.+.+..|-.||+.+|- |++.-.+.|+|..+...++ ..-.........|+|++..++.+..++.....-+.++..
T Consensus 70 ~v~s~~fR~DG~Llaa-----GD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~ 144 (487)
T KOG0310|consen 70 VVYSVDFRSDGRLLAA-----GDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY 144 (487)
T ss_pred ceeEEEeecCCeEEEc-----cCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE
Confidence 4678899999999986 3333478899965543332 212222345678899888877766543211000001110
Q ss_pred eEEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEc
Q psy1288 237 SSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIH 316 (1012)
Q Consensus 237 ~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~ 316 (1012)
+.+.......-+....|+|..+++++...-++ .+-..|..... ..+..-+-+..++.+....++.++++.
T Consensus 145 -v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg---~vrl~DtR~~~----~~v~elnhg~pVe~vl~lpsgs~iasA-- 214 (487)
T KOG0310|consen 145 -VQAELSGHTDYVRCGDISPANDHIVVTGSYDG---KVRLWDTRSLT----SRVVELNHGCPVESVLALPSGSLIASA-- 214 (487)
T ss_pred -EEEEecCCcceeEeeccccCCCeEEEecCCCc---eEEEEEeccCC----ceeEEecCCCceeeEEEcCCCCEEEEc--
Confidence 11111000012334568888899998876543 33334443321 112222223334444433334444432
Q ss_pred CceEEEEEEecCCCce
Q psy1288 317 HVKNVMHLHDLASGKH 332 (1012)
Q Consensus 317 ~g~~~l~~~dl~~G~~ 332 (1012)
|-+.+.+||+.+|..
T Consensus 215 -gGn~vkVWDl~~G~q 229 (487)
T KOG0310|consen 215 -GGNSVKVWDLTTGGQ 229 (487)
T ss_pred -CCCeEEEEEecCCce
Confidence 346789999965643
No 420
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=80.21 E-value=16 Score=38.52 Aligned_cols=90 Identities=17% Similarity=0.069 Sum_probs=53.5
Q ss_pred EEEEEcCCCCCCCCCCcCh-hHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCC
Q psy1288 434 CILYGYGGFAVSLQPGFSV-TKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512 (1012)
Q Consensus 434 ~vv~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~ 512 (1012)
.||.+-||.-....|.... ..++.|+++||+|++.=+.-+ + +...... .....+..+++.|.+.....+.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~t--f--DH~~~A~-----~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVT--F--DHQAIAR-----EVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCC--C--cHHHHHH-----HHHHHHHHHHHHHHHhcCCCcc
Confidence 6777888754444554432 245667778999988776532 1 1111111 1233456667777766543333
Q ss_pred --cEEEEecChHHHHHHHHHhh
Q psy1288 513 --RLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 513 --~i~i~G~S~GG~l~~~~~~~ 532 (1012)
.+.-+|||+|+.+.+.+...
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~ 110 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSL 110 (250)
T ss_pred cCCeeeeecccchHHHHHHhhh
Confidence 46678999999887765544
No 421
>KOG4840|consensus
Probab=79.86 E-value=4.5 Score=41.27 Aligned_cols=90 Identities=21% Similarity=0.305 Sum_probs=61.0
Q ss_pred cChhHHHHHHhCCeEEEEEcCCCCC-CCchhHHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHH
Q psy1288 450 FSVTKIVFLRDFNGIYAIPNIRGGG-EYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAA 528 (1012)
Q Consensus 450 ~~~~~~~~l~~~G~~v~~~d~RG~g-~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 528 (1012)
|-......+.+.+|..+.+..|-+- ++|..- .....+|+...++++...+. ...|.++|||-|..-++.
T Consensus 54 y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~s--------lk~D~edl~~l~~Hi~~~~f--St~vVL~GhSTGcQdi~y 123 (299)
T KOG4840|consen 54 YTTMLNRYLDENSWSLVQPQLRSSYNGYGTFS--------LKDDVEDLKCLLEHIQLCGF--STDVVLVGHSTGCQDIMY 123 (299)
T ss_pred cHHHHHHHHhhccceeeeeecccccccccccc--------ccccHHHHHHHHHHhhccCc--ccceEEEecCccchHHHH
Confidence 3333445566779999999887543 233211 12345677777887776654 348999999999988877
Q ss_pred HHhhC--CCceeEEEEccCCCccccC
Q psy1288 529 CINQR--PDLFGAAIVQVGNPEISDC 552 (1012)
Q Consensus 529 ~~~~~--p~~f~a~v~~~~~~~i~d~ 552 (1012)
.+++. +..+.++|+.+| |+|-
T Consensus 124 YlTnt~~~r~iraaIlqAp---VSDr 146 (299)
T KOG4840|consen 124 YLTNTTKDRKIRAAILQAP---VSDR 146 (299)
T ss_pred HHHhccchHHHHHHHHhCc---cchh
Confidence 77543 445678899888 8874
No 422
>KOG3101|consensus
Probab=79.67 E-value=34 Score=34.96 Aligned_cols=45 Identities=11% Similarity=0.245 Sum_probs=30.7
Q ss_pred CceEEEcccCCCCCC-CcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 816 PATLLMTADHDDRVS-PVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 816 ~p~l~~~g~~D~rv~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
.-+||=||++|...+ .---+.+-+|.+...- .|+++..-++--|.
T Consensus 216 ~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~------~~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 216 DDILIDQGAADNFLAEQLLPENLLEACKATWQ------APVVFRLQEGYDHS 261 (283)
T ss_pred ccEEEecCccchhhhhhcChHHHHHHhhcccc------ccEEEEeecCCCcc
Confidence 459999999999988 3334556666664331 28888877665564
No 423
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=79.50 E-value=6.1 Score=41.46 Aligned_cols=83 Identities=17% Similarity=0.049 Sum_probs=47.0
Q ss_pred EEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHH-HHHHHHcCCCCCC
Q psy1288 434 CILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCA-AEYLIASGYTQSS 512 (1012)
Q Consensus 434 ~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~-~~~l~~~~~~d~~ 512 (1012)
.|+++|++.+... .|.. +...+...++.|..++.+|.+.- .....+++++.+. ++.+... .++
T Consensus 2 ~lf~~p~~gG~~~--~y~~-la~~l~~~~~~v~~i~~~~~~~~----------~~~~~si~~la~~y~~~I~~~---~~~ 65 (229)
T PF00975_consen 2 PLFCFPPAGGSAS--SYRP-LARALPDDVIGVYGIEYPGRGDD----------EPPPDSIEELASRYAEAIRAR---QPE 65 (229)
T ss_dssp EEEEESSTTCSGG--GGHH-HHHHHTTTEEEEEEECSTTSCTT----------SHEESSHHHHHHHHHHHHHHH---TSS
T ss_pred eEEEEcCCccCHH--HHHH-HHHhCCCCeEEEEEEecCCCCCC----------CCCCCCHHHHHHHHHHHhhhh---CCC
Confidence 4778888765332 3433 34555532488888888875411 0111223333322 2223332 233
Q ss_pred -cEEEEecChHHHHHHHHHhh
Q psy1288 513 -RLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 513 -~i~i~G~S~GG~l~~~~~~~ 532 (1012)
.+.++|+|+||.++..++.+
T Consensus 66 gp~~L~G~S~Gg~lA~E~A~~ 86 (229)
T PF00975_consen 66 GPYVLAGWSFGGILAFEMARQ 86 (229)
T ss_dssp SSEEEEEETHHHHHHHHHHHH
T ss_pred CCeeehccCccHHHHHHHHHH
Confidence 78999999999999877654
No 424
>KOG1009|consensus
Probab=79.44 E-value=22 Score=39.57 Aligned_cols=61 Identities=16% Similarity=0.155 Sum_probs=44.4
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeeccee-eeeeEEeeCCCeEEEEecC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLK-FVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~-~~~~~WSpDG~~l~y~~~~ 223 (1012)
.+-..+||||+..++...- ...++++|+..|........+.. ...++|.|-+++|+-.+.+
T Consensus 125 diydL~Ws~d~~~l~s~s~-----dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~d 186 (434)
T KOG1009|consen 125 DIYDLAWSPDSNFLVSGSV-----DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSD 186 (434)
T ss_pred chhhhhccCCCceeeeeec-----cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccC
Confidence 3557899999999987653 24789999999987654333332 4678999999877666544
No 425
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=79.12 E-value=1.2 Score=49.05 Aligned_cols=45 Identities=9% Similarity=-0.056 Sum_probs=34.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+++.|+|||+|++|..+|...+..+ ++. ++ -.+++++++.||...
T Consensus 232 ~i~~P~lvi~G~~D~~~~~~~~~~~----~~~-~~------~~~~~~i~~~gH~~~ 276 (294)
T PLN02824 232 AVKCPVLIAWGEKDPWEPVELGRAY----ANF-DA------VEDFIVLPGVGHCPQ 276 (294)
T ss_pred hcCCCeEEEEecCCCCCChHHHHHH----Hhc-CC------ccceEEeCCCCCChh
Confidence 6789999999999999998776553 222 20 257888999999864
No 426
>KOG0771|consensus
Probab=79.09 E-value=46 Score=37.36 Aligned_cols=53 Identities=26% Similarity=0.281 Sum_probs=37.3
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-e--ecceeeeeeEEeeCC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-V--LHRLKFVSIAWTHDH 214 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t--~~~~~~~~~~WSpDG 214 (1012)
...+.+..|||||+.|++.... ...||++++|...+. + .....+...+|+.|+
T Consensus 186 ~~eV~DL~FS~dgk~lasig~d------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~ 241 (398)
T KOG0771|consen 186 HAEVKDLDFSPDGKFLASIGAD------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDN 241 (398)
T ss_pred cCccccceeCCCCcEEEEecCC------ceEEEEeccCchhhhcCCcccchhhhhceecccC
Confidence 3468899999999999987543 567889988855432 2 112235677888887
No 427
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=77.49 E-value=2.5e+02 Score=37.09 Aligned_cols=59 Identities=7% Similarity=0.064 Sum_probs=36.2
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-----------------eeeeeeEEeeCCCeEEEEe
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-----------------LKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-----------------~~~~~~~WSpDG~~l~y~~ 221 (1012)
..+++++++|..| |.++..+ ..|+++|+.++....+...+ .....++++|++..||.+.
T Consensus 626 P~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 4578899998875 4555443 37899998887654321100 0114578999766666553
No 428
>KOG1920|consensus
Probab=77.28 E-value=1.3e+02 Score=38.77 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=41.1
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+-++.+--|+..|.+.... | +|.++|.++....-...-..++...+||||++.+++.+.+
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~-G----~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~ 130 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITAL-G----DIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGR 130 (1265)
T ss_pred cceEEEEEecccceEEEEecC-C----cEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCC
Confidence 345566777777777665543 2 5777787776643222223346789999999999988754
No 429
>KOG0305|consensus
Probab=76.85 E-value=54 Score=38.39 Aligned_cols=149 Identities=13% Similarity=0.141 Sum_probs=82.3
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKN 235 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~ 235 (1012)
..+-...||+||+++|= |.....++|+|..+.++.. .+...+.+-.++|+|=-+.|+-+.... .+
T Consensus 302 qeVCgLkws~d~~~lAS-----GgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs---------~D 367 (484)
T KOG0305|consen 302 QEVCGLKWSPDGNQLAS-----GGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGS---------AD 367 (484)
T ss_pred ceeeeeEECCCCCeecc-----CCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCC---------cc
Confidence 35668999999999973 3334589999985544432 333344457789999777777664221 11
Q ss_pred ceEEEEeecc---------ccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEec
Q psy1288 236 RSSAYHLTVN---------VAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVA 306 (1012)
Q Consensus 236 ~~l~~~~~~~---------~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~ 306 (1012)
..+.+..... ...|....|++..+.|............|+.++- .. ....+..+. ..++.....++
T Consensus 368 ~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps--~~--~~~~l~gH~-~RVl~la~SPd 442 (484)
T KOG0305|consen 368 RCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS--MK--LVAELLGHT-SRVLYLALSPD 442 (484)
T ss_pred cEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc--cc--eeeeecCCc-ceeEEEEECCC
Confidence 2222222111 0234455699998888777654444556666543 22 123444443 34555555556
Q ss_pred CCEEEEEEEcCceEEEEEEec
Q psy1288 307 NDKLILSYIHHVKNVMHLHDL 327 (1012)
Q Consensus 307 ~~~l~~~~~~~g~~~l~~~dl 327 (1012)
+..++....++ .|..|.+
T Consensus 443 g~~i~t~a~DE---Tlrfw~~ 460 (484)
T KOG0305|consen 443 GETIVTGAADE---TLRFWNL 460 (484)
T ss_pred CCEEEEecccC---cEEeccc
Confidence 55555544332 3444444
No 430
>KOG0643|consensus
Probab=76.58 E-value=1.1e+02 Score=32.56 Aligned_cols=149 Identities=15% Similarity=0.146 Sum_probs=81.6
Q ss_pred eeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEE--cCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEEC
Q psy1288 113 RQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVF--LDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDV 190 (1012)
Q Consensus 113 ~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L--~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl 190 (1012)
++|+-+|=... +..+.+|... +| |+| .+ ++...+-...++-|.+++.= |+..+.+.+||+
T Consensus 20 ~eGDLlFscaK---D~~~~vw~s~--nG--erlGty~------GHtGavW~~Did~~s~~liT-----GSAD~t~kLWDv 81 (327)
T KOG0643|consen 20 REGDLLFSCAK---DSTPTVWYSL--NG--ERLGTYD------GHTGAVWCCDIDWDSKHLIT-----GSADQTAKLWDV 81 (327)
T ss_pred CCCcEEEEecC---CCCceEEEec--CC--ceeeeec------CCCceEEEEEecCCcceeee-----ccccceeEEEEc
Confidence 56665553332 3457777642 22 222 12 12345666777777777753 444568999999
Q ss_pred CCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCC-cc------cCC--CC-CceEEEEeeccccceeeeeeecCCCE
Q psy1288 191 ATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSK-SK------KHS--KK-NRSSAYHLTVNVAPITSQYITNEGPQ 260 (1012)
Q Consensus 191 ~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~-g~------~~~--~~-~~~l~~~~~~~~~~i~~~~~s~dg~~ 260 (1012)
++|+.+..-..+...-...|+++|..++++.+..... +. .+. .. ...-++..+.....+....|+|-++.
T Consensus 82 ~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ 161 (327)
T KOG0643|consen 82 ETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGET 161 (327)
T ss_pred CCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCE
Confidence 9999876444444456788999999999987542110 00 000 00 00001111111123334468888776
Q ss_pred EEEEECCCCCCceEEEEeCCCCc
Q psy1288 261 FVFKTNKDAPNYRLITIDFDNFA 283 (1012)
Q Consensus 261 l~~~tn~~~~~~~L~~~dl~~~~ 283 (1012)
|..-. ++..|-..|+.++.
T Consensus 162 ii~Gh----e~G~is~~da~~g~ 180 (327)
T KOG0643|consen 162 IIAGH----EDGSISIYDARTGK 180 (327)
T ss_pred EEEec----CCCcEEEEEcccCc
Confidence 55433 34567778877653
No 431
>KOG0279|consensus
Probab=76.45 E-value=1.1e+02 Score=32.66 Aligned_cols=199 Identities=10% Similarity=0.012 Sum_probs=98.2
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC-----Cceec-eeecceeeeeeEEeeCCCeEEEEecCCCCCc
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT-----GKEYP-EVLHRLKFVSIAWTHDHKGVFYSNQEPKSKS 228 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t-----g~~~~-~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g 228 (1012)
+...+...+..+++..+.+.++++- .+.++++.. |.+.+ ++-.....+...-|+||...+-.+.+...+-
T Consensus 14 h~d~Vt~la~~~~~~~~l~sasrDk----~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrl 89 (315)
T KOG0279|consen 14 HTDWVTALAIKIKNSDILVSASRDK----TIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRL 89 (315)
T ss_pred CCceEEEEEeecCCCceEEEcccce----EEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEE
Confidence 3446778888999999998887642 677777643 33332 2222223577888999974433232211000
Q ss_pred c-cCCCCCce-EEEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEec
Q psy1288 229 K-KHSKKNRS-SAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVA 306 (1012)
Q Consensus 229 ~-~~~~~~~~-l~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~ 306 (1012)
. ...++..+ +.-|. .++....+++|..+|.--+ ++ ..|...+.-+.. --++........+.-+.+..
T Consensus 90 WDl~~g~~t~~f~GH~----~dVlsva~s~dn~qivSGS-rD---kTiklwnt~g~c---k~t~~~~~~~~WVscvrfsP 158 (315)
T KOG0279|consen 90 WDLATGESTRRFVGHT----KDVLSVAFSTDNRQIVSGS-RD---KTIKLWNTLGVC---KYTIHEDSHREWVSCVRFSP 158 (315)
T ss_pred EEecCCcEEEEEEecC----CceEEEEecCCCceeecCC-Cc---ceeeeeeecccE---EEEEecCCCcCcEEEEEEcC
Confidence 0 01111111 11111 2333345777766654333 22 122223322211 01111111123333333322
Q ss_pred C--CEEEEEEEcCceEEEEEEecCCCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 307 N--DKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 307 ~--~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
. +.++++...| ..+.+|++.+-+.+..+....+.+....+||||.-++. ...-.+++++|+.
T Consensus 159 ~~~~p~Ivs~s~D--ktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcas----Ggkdg~~~LwdL~ 222 (315)
T KOG0279|consen 159 NESNPIIVSASWD--KTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCAS----GGKDGEAMLWDLN 222 (315)
T ss_pred CCCCcEEEEccCC--ceEEEEccCCcchhhccccccccEEEEEECCCCCEEec----CCCCceEEEEEcc
Confidence 2 3344444333 35678888544433333333566778889999986653 3344678899993
No 432
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=76.25 E-value=1.5 Score=52.40 Aligned_cols=87 Identities=9% Similarity=-0.008 Sum_probs=51.0
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCC-cEEEEEeCC-CCCCCCCc------cccchhhhhHHHH
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTN-PLLIRIETK-AGHGGGKP------TTKQFPLTIPVIY 714 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~-~~~l~~~p~-~gHg~~~~------~~~~~~~~~~~~~ 714 (1012)
+.+.|.+++|||+.=....... .....+... +. .+++.++.+ +.-||... .+..+.|...+++
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~--~~~~~~~~~-------~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~ 162 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSL--YPGDGLARE-------GDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALK 162 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCC--CChHHHHhc-------CCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHH
Confidence 4678999999998321111111 012333333 33 566777777 54455422 2233678888999
Q ss_pred HHHHhCCCCCCCCCCCCCccCCcc
Q psy1288 715 FYLTSGPVLQRYPETPNKADGSEN 738 (1012)
Q Consensus 715 fl~~~l~~~~~~~d~~~~~GgS~g 738 (1012)
|+.+.+....+.++..-+.|.|.|
T Consensus 163 wv~~~i~~fggd~~~v~~~G~SaG 186 (493)
T cd00312 163 WVQDNIAAFGGDPDSVTIFGESAG 186 (493)
T ss_pred HHHHHHHHhCCCcceEEEEeecHH
Confidence 999987765554444444488888
No 433
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=76.23 E-value=1.5 Score=49.68 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=36.5
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCC-CCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETK-AGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~gH~~~ 868 (1012)
+|+.|+||++|++|..+|+.++.++.+++.. ...+++.++ .||...
T Consensus 275 ~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p----------~a~l~~i~~~aGH~~~ 321 (343)
T PRK08775 275 AIRVPTVVVAVEGDRLVPLADLVELAEGLGP----------RGSLRVLRSPYGHDAF 321 (343)
T ss_pred cCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC----------CCeEEEEeCCccHHHH
Confidence 6669999999999999999988888666632 246778874 899754
No 434
>KOG4667|consensus
Probab=76.18 E-value=24 Score=36.23 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=39.9
Q ss_pred CCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCCCchh
Q psy1288 814 QYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTK 873 (1012)
Q Consensus 814 ~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 873 (1012)
+..|+|-+||..|.-||++.|-+|.+.+... .|.+.+++-|++..-+..
T Consensus 198 ~~C~VLTvhGs~D~IVPve~AkefAk~i~nH-----------~L~iIEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH-----------KLEIIEGADHNYTGHQSQ 246 (269)
T ss_pred ccCceEEEeccCCceeechhHHHHHHhccCC-----------ceEEecCCCcCccchhhh
Confidence 5699999999999999999999997666542 456778999999875333
No 435
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=76.16 E-value=1.9 Score=46.97 Aligned_cols=44 Identities=20% Similarity=0.171 Sum_probs=33.9
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++..|+||++|++|.-||+..+.++...+.. .++++.++ ||...
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-----------~~~~~i~~-gH~~~ 248 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-----------AELHIIDD-GHLFL 248 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-----------CEEEEEcC-CCchh
Confidence 7779999999999999999998888765532 24445554 99754
No 436
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=76.13 E-value=17 Score=43.49 Aligned_cols=109 Identities=17% Similarity=0.212 Sum_probs=61.7
Q ss_pred eeeCCEEEEEEEcCC---------------CCeeEEEEEeCCCC-------ceEEEcCCCC-C---------CCC-CceE
Q psy1288 112 QRQGDHYFFFHNTGL---------------QNHSVMYIQDSLDG-------EARVFLDPNN-L---------SDD-GTVS 158 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~---------------~~~~~l~~~~~~~g-------~~~~L~D~n~-l---------a~~-g~~~ 158 (1012)
-|..+.+|+.-+..+ ...-+||+....++ .+++++.... . ... ....
T Consensus 358 ~p~~g~vY~a~T~~~~r~~~~~~~~n~~~~n~~G~I~r~~~~~~d~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~~f~s 437 (524)
T PF05787_consen 358 NPDDGEVYFALTNNSGRGESDVDAANPRAGNGYGQIYRYDPDGNDHAATTFTWELFLVGGDPTDASGNGSNKCDDNGFAS 437 (524)
T ss_pred eCCCCEEEEEEecCCCCcccccccCCcccCCcccEEEEecccCCccccceeEEEEEEEecCcccccccccCcccCCCcCC
Confidence 366678888876443 23457888765543 4555543211 0 001 1223
Q ss_pred eeeEEECCCCcEEEEEEeCCCCce-----------E--------EEEEEECCCCceeceee--cceeeeeeEEeeCCCeE
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDW-----------T--------SMHFKDVATGKEYPEVL--HRLKFVSIAWTHDHKGV 217 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~-----------~--------~L~v~dl~tg~~~~~t~--~~~~~~~~~WSpDG~~l 217 (1012)
-..+.++|+|+. .+..+..+... + .++..+..+|+.++... .++.+.+++|+|||+.|
T Consensus 438 PDNL~~d~~G~L-wI~eD~~~~~~~l~g~t~~G~~~~~~~~~G~~~~~~~~~~g~~~rf~~~P~gaE~tG~~fspDg~tl 516 (524)
T PF05787_consen 438 PDNLAFDPDGNL-WIQEDGGGSNNNLPGVTPDGEVYDFARNDGNNVWAYDPDTGELKRFLVGPNGAEITGPCFSPDGRTL 516 (524)
T ss_pred CCceEECCCCCE-EEEeCCCCCCcccccccccCceeeeeecccceeeeccccccceeeeccCCCCcccccceECCCCCEE
Confidence 347789999983 33344332211 0 14555666777665332 23457889999999998
Q ss_pred EEEe
Q psy1288 218 FYSN 221 (1012)
Q Consensus 218 ~y~~ 221 (1012)
|..-
T Consensus 517 Fvni 520 (524)
T PF05787_consen 517 FVNI 520 (524)
T ss_pred EEEE
Confidence 7754
No 437
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=76.10 E-value=2.1 Score=48.66 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=36.0
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
+++.|+|+++|++|.-+|+.++..++..+... ...+++++ .||-.
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~---------~~~~~~~~-~gH~~ 328 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSSE---------DYTELSFP-GGHIG 328 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCCC---------CeEEEEcC-CCCEE
Confidence 57899999999999999999888887766432 56777876 68864
No 438
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=75.87 E-value=16 Score=32.12 Aligned_cols=61 Identities=18% Similarity=0.048 Sum_probs=38.0
Q ss_pred eEEECCCCcEEEEEEeCC-------------CCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 161 SYSFSEDGKTLAYCLSSS-------------GSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 161 ~~~~SPDGk~iAy~~~~~-------------G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
++.+++|+..|.|+.+.. +...-+|+.+|..+++...+...-.-..+++-|+|++.|+++.
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEE
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEe
Confidence 467788877888876532 2333589999999998754332222236789999999988875
No 439
>KOG0646|consensus
Probab=75.53 E-value=70 Score=36.46 Aligned_cols=61 Identities=8% Similarity=0.062 Sum_probs=40.9
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec-ceeeeeeEEeeCCCeEEEEecC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH-RLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~-~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
-+...+-||+|.+++-+. ..-+||+|.+.+|+.+..-.. --..+-..+|-||+.|+-.+++
T Consensus 83 ~v~al~s~n~G~~l~ag~-----i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskD 144 (476)
T KOG0646|consen 83 PVHALASSNLGYFLLAGT-----ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKD 144 (476)
T ss_pred ceeeeecCCCceEEEeec-----ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCC
Confidence 366788899998887541 223899999999997642211 1134668899999876544443
No 440
>PRK03204 haloalkane dehalogenase; Provisional
Probab=75.36 E-value=2.4 Score=46.55 Aligned_cols=43 Identities=21% Similarity=0.077 Sum_probs=31.3
Q ss_pred CCceEEEcccCCCCCCCcc-hHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVH-SLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
..|+|||+|++|.-+++.. ++.+.+.+. -.++++.++.||...
T Consensus 227 ~~PtliI~G~~D~~~~~~~~~~~~~~~ip-----------~~~~~~i~~aGH~~~ 270 (286)
T PRK03204 227 TKPTLLVWGMKDVAFRPKTILPRLRATFP-----------DHVLVELPNAKHFIQ 270 (286)
T ss_pred CCCeEEEecCCCcccCcHHHHHHHHHhcC-----------CCeEEEcCCCccccc
Confidence 7999999999999887653 333333222 347788999999865
No 441
>KOG0319|consensus
Probab=75.02 E-value=1.1e+02 Score=36.98 Aligned_cols=182 Identities=15% Similarity=0.187 Sum_probs=90.5
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce-eceeecc--eeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE-YPEVLHR--LKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~-~~~t~~~--~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
+.++||++|+.|+-... ..|-++|++++.. .+-.... .....+.-+||++.|++..... .
T Consensus 23 G~~~~s~nG~~L~t~~~------d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~-----------l 85 (775)
T KOG0319|consen 23 GPVAWSSNGQHLYTACG------DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQ-----------L 85 (775)
T ss_pred CceeECCCCCEEEEecC------ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccc-----------e
Confidence 45899999999875543 1688899999987 3311111 1236778899988877665321 0
Q ss_pred eEEEEeeccc----------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEec
Q psy1288 237 SSAYHLTVNV----------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVA 306 (1012)
Q Consensus 237 ~l~~~~~~~~----------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~ 306 (1012)
.-+|+-+.+. .++-.-.++|-| .++-.. +....+-..|+..+. ...-+...++. +... .+.
T Consensus 86 lrv~~L~tgk~irswKa~He~Pvi~ma~~~~g-~LlAtg---gaD~~v~VWdi~~~~---~th~fkG~gGv-Vssl-~F~ 156 (775)
T KOG0319|consen 86 LRVWSLPTGKLIRSWKAIHEAPVITMAFDPTG-TLLATG---GADGRVKVWDIKNGY---CTHSFKGHGGV-VSSL-LFH 156 (775)
T ss_pred EEEEEcccchHhHhHhhccCCCeEEEEEcCCC-ceEEec---cccceEEEEEeeCCE---EEEEecCCCce-EEEE-EeC
Confidence 0111111110 122122355555 222221 223456666665432 11122222222 2222 122
Q ss_pred CC--E-EEEEEEcCceEEEEEEecCCCce-eeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 307 ND--K-LILSYIHHVKNVMHLHDLASGKH-LYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 307 ~~--~-l~~~~~~~g~~~l~~~dl~~G~~-~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.+ . +++... -...+++|++.++.. ...+......+.++++++|+.+++..... ..++++|+
T Consensus 157 ~~~~~~lL~sg~--~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RD----kvi~vwd~ 221 (775)
T KOG0319|consen 157 PHWNRWLLASGA--TDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRD----KVIIVWDL 221 (775)
T ss_pred CccchhheeecC--CCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccC----cEEEEeeh
Confidence 12 1 222222 235778888865443 11222234456788889998776654432 24667776
No 442
>KOG2321|consensus
Probab=74.84 E-value=81 Score=37.00 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=22.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT 192 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t 192 (1012)
.-..+.+||||++|.-+ |...-+|.++|++.
T Consensus 53 ast~ik~s~DGqY~lAt----G~YKP~ikvydlan 83 (703)
T KOG2321|consen 53 ASTRIKVSPDGQYLLAT----GTYKPQIKVYDLAN 83 (703)
T ss_pred ccceeEecCCCcEEEEe----cccCCceEEEEccc
Confidence 44578999999998754 33334888999864
No 443
>KOG0283|consensus
Probab=74.45 E-value=83 Score=38.40 Aligned_cols=58 Identities=7% Similarity=0.013 Sum_probs=32.8
Q ss_pred EEEEEEEcCceEEEEEEecCCCceeeeecCC--ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 309 KLILSYIHHVKNVMHLHDLASGKHLYTFPLD--VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 309 ~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~--~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
.++|...+ ++|.++|+.+-+....+... ..+-...+++.||+.|+... +-..+|.++.
T Consensus 516 ~vLVTSnD---SrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s----eDs~VYiW~~ 575 (712)
T KOG0283|consen 516 EVLVTSND---SRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS----EDSWVYIWKN 575 (712)
T ss_pred eEEEecCC---CceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee----cCceEEEEeC
Confidence 45555443 67888887433333333321 12222446677999887665 3346888876
No 444
>KOG2394|consensus
Probab=73.70 E-value=16 Score=42.17 Aligned_cols=95 Identities=14% Similarity=0.056 Sum_probs=53.9
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC--------------CCc---------------eeceeecceeeee
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA--------------TGK---------------EYPEVLHRLKFVS 207 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~--------------tg~---------------~~~~t~~~~~~~~ 207 (1012)
.++....|=|-++.+...+-..| +||++|.+ .+. ..+..+......+
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sG----nlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~ 295 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASG----NLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINE 295 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecC----ceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccc
Confidence 46678888887776655555555 35555421 000 0112233334578
Q ss_pred eEEeeCCCeEEEEecCCCCCcccCCCCCceEEEEeeccc--------cceeeeeeecCCCEEEEEE
Q psy1288 208 IAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNV--------APITSQYITNEGPQFVFKT 265 (1012)
Q Consensus 208 ~~WSpDG~~l~y~~~~~~~~g~~~~~~~~~l~~~~~~~~--------~~i~~~~~s~dg~~l~~~t 265 (1012)
+++||||+.|+-++.++- -+++......+ .++....|||||+.|+.-.
T Consensus 296 f~FS~DG~~LA~VSqDGf----------LRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 296 FAFSPDGKYLATVSQDGF----------LRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred eeEcCCCceEEEEecCce----------EEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecC
Confidence 999999999999987631 12221111111 3444556999999766543
No 445
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=73.46 E-value=3.2 Score=42.31 Aligned_cols=40 Identities=13% Similarity=0.017 Sum_probs=30.4
Q ss_pred CceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 816 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 816 ~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
-++||+++..|.-++..++...|+. ...++.++.+|+|..
T Consensus 135 ~~~lvll~~~DEvLd~~~a~~~~~~--------------~~~~i~~ggdH~f~~ 174 (187)
T PF05728_consen 135 ERYLVLLQTGDEVLDYREAVAKYRG--------------CAQIIEEGGDHSFQD 174 (187)
T ss_pred ccEEEEEecCCcccCHHHHHHHhcC--------------ceEEEEeCCCCCCcc
Confidence 4899999999999999666555532 233467888999975
No 446
>KOG0289|consensus
Probab=73.39 E-value=1.7e+02 Score=33.27 Aligned_cols=198 Identities=13% Similarity=0.088 Sum_probs=94.3
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee-cceeeeeeEEeeCCCeEEEEecCCCCCcccCCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL-HRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK 233 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~-~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~ 233 (1012)
+...+.+..++||-..++-... ...|+|+.+.......... .........-.|.|++|+-.++++...-+ +..
T Consensus 260 h~kki~~v~~~~~~~~v~~aSa-----d~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fs-d~~ 333 (506)
T KOG0289|consen 260 HTKKITSVKFHKDLDTVITASA-----DEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFS-DIS 333 (506)
T ss_pred cceEEEEEEeccchhheeecCC-----cceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEE-Ecc
Confidence 3456788899999877653322 2366666654332211111 11112333344455544444333211000 000
Q ss_pred CCceEEEEeeccccc--eeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEE
Q psy1288 234 KNRSSAYHLTVNVAP--ITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLI 311 (1012)
Q Consensus 234 ~~~~l~~~~~~~~~~--i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 311 (1012)
....+.-+.. ...+ +....+.||| ++|.+. .++..|-..|+..+. +. .-++.. ...+..+...++++..
T Consensus 334 ~g~~lt~vs~-~~s~v~~ts~~fHpDg--Lifgtg--t~d~~vkiwdlks~~--~~-a~Fpgh-t~~vk~i~FsENGY~L 404 (506)
T KOG0289|consen 334 SGSQLTVVSD-ETSDVEYTSAAFHPDG--LIFGTG--TPDGVVKIWDLKSQT--NV-AKFPGH-TGPVKAISFSENGYWL 404 (506)
T ss_pred CCcEEEEEee-ccccceeEEeeEcCCc--eEEecc--CCCceEEEEEcCCcc--cc-ccCCCC-CCceeEEEeccCceEE
Confidence 1112222111 1122 3344578887 444442 245566667776654 11 112222 2234455555656655
Q ss_pred EEEEcCceEEEEEEecCCCceeeeecCCc-eEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 312 LSYIHHVKNVMHLHDLASGKHLYTFPLDV-GTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 312 ~~~~~~g~~~l~~~dl~~G~~~~~l~~~~-~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
+...+++. +.+||+..-+..+.++.+. ..+..++++..|..+....+ --.+|.++-
T Consensus 405 at~add~~--V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~----~l~Vy~~~k 461 (506)
T KOG0289|consen 405 ATAADDGS--VKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS----DLQVYICKK 461 (506)
T ss_pred EEEecCCe--EEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecc----eeEEEEEec
Confidence 55556554 8888985434344555552 23556777777777666532 235666664
No 447
>KOG0289|consensus
Probab=72.93 E-value=1.3e+02 Score=34.27 Aligned_cols=180 Identities=15% Similarity=0.136 Sum_probs=84.8
Q ss_pred CCceEEEEEEECCCCceeceeecc-eeeeeeEEeeCCCeEEEEecCCCCC--cccCCCCCceEEEEeeccccceeeeeee
Q psy1288 179 GSDWTSMHFKDVATGKEYPEVLHR-LKFVSIAWTHDHKGVFYSNQEPKSK--SKKHSKKNRSSAYHLTVNVAPITSQYIT 255 (1012)
Q Consensus 179 G~~~~~L~v~dl~tg~~~~~t~~~-~~~~~~~WSpDG~~l~y~~~~~~~~--g~~~~~~~~~l~~~~~~~~~~i~~~~~s 255 (1012)
|...-.+.++|-.+++.+..-.++ .....+.++||...++-.+.+.... ......+...+.-|+ .++.+....
T Consensus 237 GG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~----~~V~~ls~h 312 (506)
T KOG0289|consen 237 GGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHE----EPVTGLSLH 312 (506)
T ss_pred cCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCcccccccc----ccceeeeec
Confidence 333446778887777765432222 2345666677765544333221000 000000111111111 233333355
Q ss_pred cCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeee
Q psy1288 256 NEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYT 335 (1012)
Q Consensus 256 ~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~ 335 (1012)
|.|++|+-.+|++.-.| -|..++. ....+..+..+.-+.....-.++.|+.....+ +.|.+||+.++.....
T Consensus 313 ~tgeYllsAs~d~~w~F----sd~~~g~--~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d--~~vkiwdlks~~~~a~ 384 (506)
T KOG0289|consen 313 PTGEYLLSASNDGTWAF----SDISSGS--QLTVVSDETSDVEYTSAAFHPDGLIFGTGTPD--GVVKIWDLKSQTNVAK 384 (506)
T ss_pred cCCcEEEEecCCceEEE----EEccCCc--EEEEEeeccccceeEEeeEcCCceEEeccCCC--ceEEEEEcCCcccccc
Confidence 66666666665532222 1222221 11112122112223333333324445445554 5778889976654445
Q ss_pred ecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeCC
Q psy1288 336 FPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIP 374 (1012)
Q Consensus 336 l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~~ 374 (1012)
++...+-|..++|+.+|=.++..++. ..+..+|++
T Consensus 385 Fpght~~vk~i~FsENGY~Lat~add----~~V~lwDLR 419 (506)
T KOG0289|consen 385 FPGHTGPVKAISFSENGYWLATAADD----GSVKLWDLR 419 (506)
T ss_pred CCCCCCceeEEEeccCceEEEEEecC----CeEEEEEeh
Confidence 55446677788888777555544433 348889984
No 448
>KOG2931|consensus
Probab=72.66 E-value=22 Score=38.35 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=78.1
Q ss_pred EECCCCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCC---CCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhh
Q psy1288 408 YPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVS---LQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGG 484 (1012)
Q Consensus 408 ~~s~DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 484 (1012)
+...-|. |.+.++-- +++++|+++..|.-.-.. ...-|.....+-+..+ +.|+-++..|...-...+-
T Consensus 27 V~T~~G~-v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p--- 97 (326)
T KOG2931|consen 27 VETAHGV-VHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFP--- 97 (326)
T ss_pred ecccccc-EEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCC---
Confidence 3444443 55555432 234678899998732211 1222332223344443 9999999998643211111
Q ss_pred hcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccCCCccccCccee
Q psy1288 485 RLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWL 556 (1012)
Q Consensus 485 ~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~~i~d~~~~~ 556 (1012)
....-.+.+|+.+-+..+... ..-+.+..+|--+|+++-.+.+..+|++..+.|.....+--.-|.+|.
T Consensus 98 -~~y~yPsmd~LAd~l~~VL~~--f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~ 166 (326)
T KOG2931|consen 98 -EGYPYPSMDDLADMLPEVLDH--FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWA 166 (326)
T ss_pred -CCCCCCCHHHHHHHHHHHHHh--cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHH
Confidence 111123445555444444433 234567778999999999999999999999999887633333444443
No 449
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=72.29 E-value=3.2 Score=41.70 Aligned_cols=39 Identities=21% Similarity=0.235 Sum_probs=30.8
Q ss_pred CceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 816 PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 816 ~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
-|.+++.++||+-||...+.++...|.. ++++.++.||=
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~a------------~~~~~~~~GHf 153 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLGA------------ELIILGGGGHF 153 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT-------------EEEEETS-TTS
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcCC------------CeEECCCCCCc
Confidence 5569999999999999999999888755 46688999993
No 450
>KOG0303|consensus
Probab=71.57 E-value=1.7e+02 Score=32.89 Aligned_cols=60 Identities=20% Similarity=0.191 Sum_probs=43.9
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee--cceeeeeeEEeeCCCeEEEE
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL--HRLKFVSIAWTHDHKGVFYS 220 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~--~~~~~~~~~WSpDG~~l~y~ 220 (1012)
+...+-+..|+-||.+++-+... -.|+|+|..+|+...... .+.+..-..|..||+ |+-+
T Consensus 172 hpd~i~S~sfn~dGs~l~TtckD-----KkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~-i~tT 233 (472)
T KOG0303|consen 172 HPDMVYSMSFNRDGSLLCTTCKD-----KKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK-IFTT 233 (472)
T ss_pred CCCeEEEEEeccCCceeeeeccc-----ceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-eeee
Confidence 45578899999999999866543 279999999999876542 233446678999998 4433
No 451
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=71.29 E-value=1.7e+02 Score=32.25 Aligned_cols=102 Identities=11% Similarity=-0.018 Sum_probs=59.1
Q ss_pred eecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceee-eeEEecCCEEEEEEEc--CceEEEEEEecCCC
Q psy1288 254 ITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLD-WATCVANDKLILSYIH--HVKNVMHLHDLASG 330 (1012)
Q Consensus 254 ~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~l~~~~~~--~g~~~l~~~dl~~G 330 (1012)
.+|....+++...+.+ .-++++|..+++. ...+.+.....+.. .....|++.||...++ .+...|-+||...+
T Consensus 12 ~~p~~~~avafaRRPG--~~~~v~D~~~g~~--~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 12 AHPTRPEAVAFARRPG--TFALVFDCRTGQL--LQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred eCCCCCeEEEEEeCCC--cEEEEEEcCCCce--eeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 5676666777776643 4577888877662 23444444444443 3445566778777653 56789999999622
Q ss_pred -ceeeeecCCceEEEeecccccCcEEEEEe
Q psy1288 331 -KHLYTFPLDVGTIVGFSGKKKYSEIFYSF 359 (1012)
Q Consensus 331 -~~~~~l~~~~~~v~~~~~spdg~~l~~~~ 359 (1012)
+...+++..--.-..+.+.|||++|++.-
T Consensus 88 ~~ri~E~~s~GIGPHel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 88 YRRIGEFPSHGIGPHELLLMPDGETLVVAN 117 (305)
T ss_pred cEEEeEecCCCcChhhEEEcCCCCEEEEEc
Confidence 12223332211112456788998877654
No 452
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=69.66 E-value=1.6e+02 Score=31.24 Aligned_cols=192 Identities=11% Similarity=0.027 Sum_probs=94.9
Q ss_pred eEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEe-eCCCeEEEEecCCCCCcccCCCCCceEE
Q psy1288 161 SYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWT-HDHKGVFYSNQEPKSKSKKHSKKNRSSA 239 (1012)
Q Consensus 161 ~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WS-pDG~~l~y~~~~~~~~g~~~~~~~~~l~ 239 (1012)
++.|.++...|.|+--..+ +|+.++.++++........ ..+.... +|| .|++........-.... ...+.+
T Consensus 4 gp~~d~~~g~l~~~D~~~~----~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g-~l~v~~~~~~~~~d~~~-g~~~~~ 75 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGG----RIYRVDPDTGEVEVIDLPG--PNGMAFDRPDG-RLYVADSGGIAVVDPDT-GKVTVL 75 (246)
T ss_dssp EEEEETTTTEEEEEETTTT----EEEEEETTTTEEEEEESSS--EEEEEEECTTS-EEEEEETTCEEEEETTT-TEEEEE
T ss_pred ceEEECCCCEEEEEEcCCC----EEEEEECCCCeEEEEecCC--CceEEEEccCC-EEEEEEcCceEEEecCC-CcEEEE
Confidence 6889986777766533333 7999999998875433333 2445555 564 45555432110000011 111222
Q ss_pred EEeeccc---cceeeeeeecCCCEEEEEECCCC---CC--ceEEEEeCCCCcccCcEEeeccCCCceeeeeE-EecCCEE
Q psy1288 240 YHLTVNV---APITSQYITNEGPQFVFKTNKDA---PN--YRLITIDFDNFAESNWKTLIEENKDDVLDWAT-CVANDKL 310 (1012)
Q Consensus 240 ~~~~~~~---~~i~~~~~s~dg~~l~~~tn~~~---~~--~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l 310 (1012)
....... .......++++|+ |||...... .. ..|++++.+ ++ .+.+... -.....+. ..+++.|
T Consensus 76 ~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~---~~~~~~~--~~~pNGi~~s~dg~~l 148 (246)
T PF08450_consen 76 ADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK---VTVVADG--LGFPNGIAFSPDGKTL 148 (246)
T ss_dssp EEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE---EEEEEEE--ESSEEEEEEETTSSEE
T ss_pred eeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce---EEEEecC--cccccceEECCcchhe
Confidence 2221111 1111235778876 777754321 12 679999987 33 2333222 11222333 3454577
Q ss_pred EEEEEcCceEEEEEEecCC-Cc-e--eeee-cCC--ceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 311 ILSYIHHVKNVMHLHDLAS-GK-H--LYTF-PLD--VGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 311 ~~~~~~~g~~~l~~~dl~~-G~-~--~~~l-~~~--~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
++..... .+|+.++++. +. . .+.+ ..+ .+...++..+.+|+ |++... ....|+++|.
T Consensus 149 yv~ds~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~---~~~~I~~~~p 212 (246)
T PF08450_consen 149 YVADSFN--GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW---GGGRIVVFDP 212 (246)
T ss_dssp EEEETTT--TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE---TTTEEEEEET
T ss_pred eeccccc--ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc---CCCEEEEECC
Confidence 7655443 4588888742 22 1 1222 222 23355667777775 555433 3457999998
No 453
>KOG2111|consensus
Probab=69.57 E-value=18 Score=39.10 Aligned_cols=63 Identities=16% Similarity=0.224 Sum_probs=48.4
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc---eeeeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR---LKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~---~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+.-++++-+|..||=.+. .| .-|+++|..+|+.+++-..+ +....+++|||+++|+..++.
T Consensus 182 s~Iacv~Ln~~Gt~vATaSt-kG---TLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdK 247 (346)
T KOG2111|consen 182 SDIACVALNLQGTLVATAST-KG---TLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDK 247 (346)
T ss_pred CceeEEEEcCCccEEEEecc-Cc---EEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCC
Confidence 46778999999999985544 34 47999999999987654333 345789999999999988753
No 454
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=69.36 E-value=45 Score=37.02 Aligned_cols=128 Identities=10% Similarity=0.096 Sum_probs=70.3
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHhCCeEEEEEcCCCCCC-CchhH-------Hhh
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGE-YGERW-------HDG 483 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~-~g~~~-------~~~ 483 (1012)
++.++ ..+++|... ....-+||.+||-......++.-......|.+.||..+.+....-.. .-... ...
T Consensus 70 ~~~~f-laL~~~~~~--~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a 146 (310)
T PF12048_consen 70 GEERF-LALWRPANS--AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSA 146 (310)
T ss_pred CCEEE-EEEEecccC--CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCC
Confidence 34444 345555542 33445888999866555555554445566788999998877664110 00000 000
Q ss_pred hh---------------------cCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCC-ceeEEE
Q psy1288 484 GR---------------------LLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPD-LFGAAI 541 (1012)
Q Consensus 484 ~~---------------------~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v 541 (1012)
+. .......+.-+.+++.++..++ ..+|.++|++.|++++..++...+. ...+.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~---~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV 223 (310)
T PF12048_consen 147 GDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG---GKNIVLIGHGTGAGWAARYLAEKPPPMPDALV 223 (310)
T ss_pred CCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC---CceEEEEEeChhHHHHHHHHhcCCCcccCeEE
Confidence 00 0000112223334444444443 2349999999999999988887654 356777
Q ss_pred EccC
Q psy1288 542 VQVG 545 (1012)
Q Consensus 542 ~~~~ 545 (1012)
...+
T Consensus 224 ~I~a 227 (310)
T PF12048_consen 224 LINA 227 (310)
T ss_pred EEeC
Confidence 7665
No 455
>PLN02872 triacylglycerol lipase
Probab=69.04 E-value=4 Score=46.97 Aligned_cols=42 Identities=12% Similarity=-0.066 Sum_probs=34.0
Q ss_pred CCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCC
Q psy1288 815 YPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866 (1012)
Q Consensus 815 ~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~ 866 (1012)
+.|++|++|++|.-|++...+++...|.. .+.++.+++.||.
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~----------~~~l~~l~~~gH~ 366 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPS----------KPELLYLENYGHI 366 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCC----------ccEEEEcCCCCCH
Confidence 47999999999999998888887766643 2366778999996
No 456
>KOG1063|consensus
Probab=68.85 E-value=23 Score=42.15 Aligned_cols=102 Identities=15% Similarity=0.130 Sum_probs=52.3
Q ss_pred eeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE-C
Q psy1288 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD-V 190 (1012)
Q Consensus 112 ~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d-l 190 (1012)
+|+|+.++=.=+....+++.|++-.+..=...+-+- .+...+....|||||++|+=.... ....||-.- -
T Consensus 534 s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~------~HsLTVT~l~FSpdg~~LLsvsRD---Rt~sl~~~~~~ 604 (764)
T KOG1063|consen 534 SPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELE------GHSLTVTRLAFSPDGRYLLSVSRD---RTVSLYEVQED 604 (764)
T ss_pred cCCCCEEeehhhhCCccceEEEEEeccchhhhheec------ccceEEEEEEECCCCcEEEEeecC---ceEEeeeeecc
Confidence 366776664433444566777776543211111111 134678899999999999754432 123444331 1
Q ss_pred CCCcee-c-eeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 191 ATGKEY-P-EVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 191 ~tg~~~-~-~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
...+.+ . .......+-...|+||+++| ++..+
T Consensus 605 ~~~e~~fa~~k~HtRIIWdcsW~pde~~F-aTaSR 638 (764)
T KOG1063|consen 605 IKDEFRFACLKAHTRIIWDCSWSPDEKYF-ATASR 638 (764)
T ss_pred cchhhhhccccccceEEEEcccCccccee-EEecC
Confidence 111111 0 11111124667999999984 44433
No 457
>PRK13615 lipoprotein LpqB; Provisional
Probab=68.66 E-value=2.5e+02 Score=33.93 Aligned_cols=159 Identities=14% Similarity=0.097 Sum_probs=77.8
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcc--cCCCCCc
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSK--KHSKKNR 236 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~--~~~~~~~ 236 (1012)
..++.+|+||+.+|+... . ..|++-... +..+ ..........|+|.++| ++. +..++...-. .......
T Consensus 336 ~~s~avS~dg~~~A~v~~---~--~~l~vg~~~-~~~~-~~~~~~~Lt~PS~d~~g-~vW-tv~~g~~~~l~~~~~~G~~ 406 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA---S--GVWSVGDGD-RDAV-LLDTRPGLVAPSLDAQG-YVW-STPASDPRGLVAWGPDGVG 406 (557)
T ss_pred cccceEcCCCceEEEEcC---C--ceEEEecCC-Ccce-eeccCCccccCcCcCCC-CEE-EEeCCCceEEEEecCCCce
Confidence 468899999999999843 1 256666544 2222 22333345778888887 443 3322111000 0000000
Q ss_pred eEEEEee-ccccceeeeeeecCCCEEEEEECCCCCCceEEE--EeCCCCcc----cCcEEeeccCCCceeeeeEEecCCE
Q psy1288 237 SSAYHLT-VNVAPITSQYITNEGPQFVFKTNKDAPNYRLIT--IDFDNFAE----SNWKTLIEENKDDVLDWATCVANDK 309 (1012)
Q Consensus 237 ~l~~~~~-~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~--~dl~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~ 309 (1012)
..+ ..+ .....|....+|+||-+++++.+.+. ..+|+. +--..+.+ ...+++.+... .. ....|.++..
T Consensus 407 ~~v-~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g-~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~-~v-~sl~W~~~~~ 482 (557)
T PRK13615 407 HPV-AVSWTATGRVVSLEVARDGARVLVQLETGA-GPQLLVASIVRDGGVPTSLTTTPLELLASPG-TP-LDATWVDELD 482 (557)
T ss_pred EEe-eccccCCCeeEEEEeCCCccEEEEEEecCC-CCEEEEEEEEeCCCcceEeeeccEEcccCcC-cc-eeeEEcCCCE
Confidence 000 000 00123444568999999999876433 233443 22222211 11223332221 22 3344555567
Q ss_pred EEEEEE-cCceEEEEEEecCCCc
Q psy1288 310 LILSYI-HHVKNVMHLHDLASGK 331 (1012)
Q Consensus 310 l~~~~~-~~g~~~l~~~dl~~G~ 331 (1012)
|++... .+...+++++.+. |.
T Consensus 483 laVl~~~~~~~~~v~~v~v~-g~ 504 (557)
T PRK13615 483 VATLTLAPDGERQVELHQVG-GP 504 (557)
T ss_pred EEEEeccCCCCceEEEEECC-Cc
Confidence 755543 3445678888884 54
No 458
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=68.42 E-value=45 Score=35.50 Aligned_cols=83 Identities=11% Similarity=0.055 Sum_probs=47.1
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCCCCccccchhhhhHHHHHHHHhCCC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGPV 722 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~~~~~~~~~~~~~~~~~fl~~~l~~ 722 (1012)
.-.||.+|+.||.. -...+|.++.++.. +.+.+++. |.-...+.....+.++..+.+.+||...|..
T Consensus 43 ~G~yPVilF~HG~~-------l~ns~Ys~lL~HIA----SHGfIVVA--PQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 43 AGTYPVILFLHGFN-------LYNSFYSQLLAHIA----SHGFIVVA--PQLYTLFPPDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CCCccEEEEeechh-------hhhHHHHHHHHHHh----hcCeEEEe--chhhcccCCCchHHHHHHHHHHHHHHhhhhh
Confidence 46899999999972 22456666665522 13444333 3332333333344567888889999877543
Q ss_pred C---CCCCCCCCCc--cCCcc
Q psy1288 723 L---QRYPETPNKA--DGSEN 738 (1012)
Q Consensus 723 ~---~~~~d~~~~~--GgS~g 738 (1012)
. ...++-.+++ |-|.|
T Consensus 110 ~Lp~~V~~nl~klal~GHSrG 130 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRG 130 (307)
T ss_pred hCCCCcccccceEEEeecCCc
Confidence 2 1223344444 76777
No 459
>COG0627 Predicted esterase [General function prediction only]
Probab=68.17 E-value=4.6 Score=44.77 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=68.5
Q ss_pred ccccCccceeeeccccccccchhhhcccccCCCCCC-------CCCCCcccCCCCCChhhhhHhHcCCCCCCCCC---CC
Q psy1288 739 VRNQDQKLYYHYLGTDQKDDILIAEVLDMLKFNKFT-------IGYFWESDYGSPANSSQFEYLLGYSPLHNIQG---PN 808 (1012)
Q Consensus 739 ~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~Sp~~~v~~---~~ 808 (1012)
.+..||++|..+.+ .+|+++-.+..... .+..+...||...++ .+.++.|..+++. .+
T Consensus 169 lA~~~pd~f~~~sS--------~Sg~~~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~----~w~~~D~~~~~~~l~~~~ 236 (316)
T COG0627 169 LALKHPDRFKSASS--------FSGILSPSSPWGPTLAMGDPWGGKAFNAMLGPDSDP----AWQENDPLSLIEKLVANA 236 (316)
T ss_pred hhhhCcchhceecc--------ccccccccccccccccccccccCccHHHhcCCCccc----cccccCchhHHHHhhhcc
Confidence 44556677776655 55777765433222 222333456766432 2345555555540 00
Q ss_pred --CCC--CCCCCceEEEcccCCCCCC--CcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 809 --ELK--GKQYPATLLMTADHDDRVS--PVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 809 --~~~--~~~~~p~l~~~g~~D~rv~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
..- +...+++++-+|..|..-. ......|.++|+..|+ |..+..++.-.|..
T Consensus 237 ~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~-------~~~~~~~~~G~Hsw 294 (316)
T COG0627 237 NTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGI-------PNGVRDQPGGDHSW 294 (316)
T ss_pred cccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCC-------CceeeeCCCCCcCH
Confidence 000 0155888899999999885 5678999999999988 88888887778865
No 460
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=67.98 E-value=22 Score=38.39 Aligned_cols=50 Identities=12% Similarity=-0.044 Sum_probs=32.4
Q ss_pred EEcccCCCCCCCcchHHHHHHHHHHhcCC----------------CCCCCCEEEEEeCCCCCCCCC
Q psy1288 820 LMTADHDDRVSPVHSLKFAATLQEKLRDY----------------PHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 820 ~~~g~~D~rv~~~~~~~~~~~l~~~~~~~----------------~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
|-+|..|--|+..++.+.+++|-.-.-+- -..+.+|+++...+-||..-.
T Consensus 213 ~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~ 278 (312)
T COG3509 213 IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPG 278 (312)
T ss_pred cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcC
Confidence 77777887777667777777664321110 012347888899999998754
No 461
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=67.78 E-value=12 Score=42.23 Aligned_cols=65 Identities=15% Similarity=0.093 Sum_probs=54.1
Q ss_pred ChhhhhHhHcCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCC
Q psy1288 788 NSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 867 (1012)
Q Consensus 788 ~~~~~~~~~~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~ 867 (1012)
.|+-.+.+.-.-|+.+.+ +..-|-|||.|.+|..-.+--+.-+|..|+- +-.+.+.|+.+|+.
T Consensus 242 tp~f~~L~~ivDP~~Y~~-------rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G----------~K~lr~vPN~~H~~ 304 (367)
T PF10142_consen 242 TPEFDKLMQIVDPYSYRD-------RLTMPKYIINATGDEFFVPDSSNFYYDKLPG----------EKYLRYVPNAGHSL 304 (367)
T ss_pred CHHHHHHHHhcCHHHHHH-------hcCccEEEEecCCCceeccCchHHHHhhCCC----------CeeEEeCCCCCccc
Confidence 344344455668999999 9999999999999999999999999999875 44677889999998
Q ss_pred CC
Q psy1288 868 GK 869 (1012)
Q Consensus 868 ~~ 869 (1012)
..
T Consensus 305 ~~ 306 (367)
T PF10142_consen 305 IG 306 (367)
T ss_pred ch
Confidence 76
No 462
>KOG2106|consensus
Probab=67.58 E-value=14 Score=42.17 Aligned_cols=59 Identities=15% Similarity=0.096 Sum_probs=38.2
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee-cceeeeeeEEeeCCCeEE
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL-HRLKFVSIAWTHDHKGVF 218 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~-~~~~~~~~~WSpDG~~l~ 218 (1012)
..++.+++||||..||.....+ ...||.++..+.+..+... .+.......||+|++.|.
T Consensus 448 ~~ls~v~ysp~G~~lAvgs~d~---~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~ 507 (626)
T KOG2106|consen 448 EQLSVVRYSPDGAFLAVGSHDN---HIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLV 507 (626)
T ss_pred CceEEEEEcCCCCEEEEecCCC---eEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEE
Confidence 4678999999999999876532 2355555554444333222 223357789999998553
No 463
>KOG0278|consensus
Probab=67.43 E-value=1.7e+02 Score=30.85 Aligned_cols=145 Identities=10% Similarity=0.098 Sum_probs=74.7
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecCCCCCcccCCCCCc
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKNR 236 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~~~ 236 (1012)
..+...-|--..+.|+=+ .. .-++++||..+|...+.........+..-|+||+.|-..-..
T Consensus 144 g~Ir~v~wc~eD~~iLSS-ad----d~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gs------------- 205 (334)
T KOG0278|consen 144 GGIRTVLWCHEDKCILSS-AD----DKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGS------------- 205 (334)
T ss_pred CcceeEEEeccCceEEee-cc----CCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCc-------------
Confidence 355555665555555433 22 227999999999887644344446788999999855332111
Q ss_pred eEEEEeeccc---------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEee-ccCCCceeeeeEEec
Q psy1288 237 SSAYHLTVNV---------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLI-EENKDDVLDWATCVA 306 (1012)
Q Consensus 237 ~l~~~~~~~~---------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~-~~~~~~~~~~~~~~~ 306 (1012)
.+.|....+. -.++....+|+. .+|+.. ++.+.++++|-.+++. .... ......+ ..+....
T Consensus 206 sV~Fwdaksf~~lKs~k~P~nV~SASL~P~k-~~fVaG---ged~~~~kfDy~TgeE---i~~~nkgh~gpV-hcVrFSP 277 (334)
T KOG0278|consen 206 SVKFWDAKSFGLLKSYKMPCNVESASLHPKK-EFFVAG---GEDFKVYKFDYNTGEE---IGSYNKGHFGPV-HCVRFSP 277 (334)
T ss_pred eeEEeccccccceeeccCccccccccccCCC-ceEEec---CcceEEEEEeccCCce---eeecccCCCCce-EEEEECC
Confidence 1222221111 112223355654 455543 3568899999887751 1111 1111222 2222223
Q ss_pred CCEEEEEEEcCceEEEEEEec
Q psy1288 307 NDKLILSYIHHVKNVMHLHDL 327 (1012)
Q Consensus 307 ~~~l~~~~~~~g~~~l~~~dl 327 (1012)
++.++.+-.++|.-+||....
T Consensus 278 dGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 278 DGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred CCceeeccCCCceEEEEEecC
Confidence 255666666666555554433
No 464
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=67.22 E-value=6 Score=41.06 Aligned_cols=44 Identities=23% Similarity=0.302 Sum_probs=33.6
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHHHhhhccCCCCCCcEEEEEeCCCCCCC
Q psy1288 643 GKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGG 698 (1012)
Q Consensus 643 ~~~~P~vLiihG~~D~~v~~~~s~~~~~~L~~~~~~~~~~~~~~~l~~~p~~gHg~ 698 (1012)
+++.| +|+++|..|+.+++.....+.+.+. ...+.+.+++||..
T Consensus 173 ~i~~p-~l~i~~~~D~~~p~~~~~~~~~~~~-----------~~~~~~~~~~GH~~ 216 (230)
T PF00561_consen 173 NIKVP-TLIIWGEDDPLVPPESSEQLAKLIP-----------NSQLVLIEGSGHFA 216 (230)
T ss_dssp TTTSE-EEEEEETTCSSSHHHHHHHHHHHST-----------TEEEEEETTCCSTH
T ss_pred ccCCC-eEEEEeCCCCCCCHHHHHHHHHhcC-----------CCEEEECCCCChHH
Confidence 56788 9999999999999877766333322 25788889999975
No 465
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=66.26 E-value=15 Score=29.93 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=25.8
Q ss_pred CCCceEEEEEECCCCceEEEEEEEeCC--CCCCCCCcEEEEEcCCCCCC
Q psy1288 399 SLFETKQVFYPSKDGTKIPMFILSRKG--AQLDGNNPCILYGYGGFAVS 445 (1012)
Q Consensus 399 ~~~~~~~v~~~s~DG~~i~~~l~~p~~--~~~~~~~P~vv~~hGg~~~~ 445 (1012)
.+|.+|...+.+.||--|...-+.+.. .....++|.|++.||-...+
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 357788999999999888776555444 23456789999999965443
No 466
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=66.16 E-value=6.2 Score=45.29 Aligned_cols=45 Identities=11% Similarity=-0.056 Sum_probs=35.1
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+++.|+||++|++|.-++...++++... . ..++++.|+.||....
T Consensus 323 ~i~vPvLiI~G~~D~~v~~~~~~~~a~~-----~-------~a~l~vIp~aGH~~~~ 367 (383)
T PLN03084 323 NWKTPITVCWGLRDRWLNYDGVEDFCKS-----S-------QHKLIELPMAGHHVQE 367 (383)
T ss_pred cCCCCEEEEeeCCCCCcCHHHHHHHHHh-----c-------CCeEEEECCCCCCcch
Confidence 5789999999999999988766665442 2 3477889999997653
No 467
>PRK13613 lipoprotein LpqB; Provisional
Probab=64.90 E-value=62 Score=39.43 Aligned_cols=114 Identities=13% Similarity=0.193 Sum_probs=61.1
Q ss_pred cccCCCCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCc
Q psy1288 102 MWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSD 181 (1012)
Q Consensus 102 ~~~~~~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~ 181 (1012)
.+.......|+.|..-+.|+-+.+......|+.... .++... .+...+. | ..+..+++|+||-++|..+..+|..
T Consensus 405 ~~~~~~Lt~PS~d~~g~vWtvd~~~~~~~vl~v~~~-~G~~~~-V~~~~l~--g-~~I~~lrvSrDG~RvAvv~~~~g~~ 479 (599)
T PRK13613 405 VTADGRLTSPSWDGRGDLWVVDRDPADPRLLWLLQG-DGEPVE-VRTPELD--G-HRVVAVRVARDGVRVALIVEKDGRR 479 (599)
T ss_pred eeccCcccCCcCcCCCCEEEecCCCCCceEEEEEcC-CCcEEE-eeccccC--C-CEeEEEEECCCccEEEEEEecCCCc
Confidence 344556778887654344444321112223444333 444433 3332222 2 3699999999999999999876655
Q ss_pred eEEEEEEEC-CCCce-----eceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 182 WTSMHFKDV-ATGKE-----YPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 182 ~~~L~v~dl-~tg~~-----~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
...|-.+-- +.|+. +.+........+++|..|++ |+.+.
T Consensus 480 ~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~s-L~Vlg 524 (599)
T PRK13613 480 SLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQ-LVVLG 524 (599)
T ss_pred EEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcCCCE-EEEEe
Confidence 433333322 34431 11111122357889987765 65543
No 468
>KOG3975|consensus
Probab=64.84 E-value=75 Score=33.53 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=51.1
Q ss_pred CCCCCcEEEEEcCCCCCCCCCCcChhHHHHH-HhCC--eEEEEEcCCCCCCCchhHHhhhhc-CCCcchHhHHHHHHHHH
Q psy1288 428 LDGNNPCILYGYGGFAVSLQPGFSVTKIVFL-RDFN--GIYAIPNIRGGGEYGERWHDGGRL-LNKQNVFDDFQCAAEYL 503 (1012)
Q Consensus 428 ~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l-~~~G--~~v~~~d~RG~g~~g~~~~~~~~~-~~~~~~~~D~~a~~~~l 503 (1012)
.....|+++++-|.++.. +|-..+..-| ...+ .-+..+..-|+...-..-.+.... ....-..+|.+.---.+
T Consensus 25 ~~~~~~li~~IpGNPG~~---gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL---GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCCCceEEEEecCCCCch---hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 345678999999987643 3322222211 1111 223333333333222111111111 11122344554433334
Q ss_pred HHcCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 504 IASGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 504 ~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
++.-.-...+|.++|||-|+++++..+-.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 44434456799999999999999988764
No 469
>KOG0270|consensus
Probab=64.74 E-value=2.6e+02 Score=31.97 Aligned_cols=122 Identities=16% Similarity=0.252 Sum_probs=65.4
Q ss_pred EEECCCCcEEEEEEeCCCCceEEEEEEECCCCceece-eecceeeeeeEEeeCCCeEEEEecCCCCCcccCCC--CCceE
Q psy1288 162 YSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPE-VLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSK--KNRSS 238 (1012)
Q Consensus 162 ~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~-t~~~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~--~~~~l 238 (1012)
+.|--+-+.|+.+ |+...++.+||+++|+.... +..+.......|.|-.-.++.+........-.+.- .+...
T Consensus 249 Ls~n~~~~nVLaS----gsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~ 324 (463)
T KOG0270|consen 249 LSWNRNFRNVLAS----GSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGK 324 (463)
T ss_pred HHhccccceeEEe----cCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCc
Confidence 3344444445443 33446899999999998653 33445578899999876666664321100000000 00000
Q ss_pred EEEeeccccceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccC
Q psy1288 239 AYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEEN 294 (1012)
Q Consensus 239 ~~~~~~~~~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~ 294 (1012)
.+... ..++-..|.|.....+|.+.. ++.|+-+|+.++....|. +.+++
T Consensus 325 ~wk~~---g~VEkv~w~~~se~~f~~~td---dG~v~~~D~R~~~~~vwt-~~AHd 373 (463)
T KOG0270|consen 325 EWKFD---GEVEKVAWDPHSENSFFVSTD---DGTVYYFDIRNPGKPVWT-LKAHD 373 (463)
T ss_pred eEEec---cceEEEEecCCCceeEEEecC---CceEEeeecCCCCCceeE-EEecc
Confidence 00000 234444577777666666543 467899999887644453 44444
No 470
>KOG2565|consensus
Probab=64.70 E-value=30 Score=38.43 Aligned_cols=116 Identities=19% Similarity=0.258 Sum_probs=67.5
Q ss_pred CCceEEEEEEEeCCCCCCCCCcEEEEEcCCCCCCCCCCcChhHHHHHHh---------CCeEEEEEcCCCCCCCchhHHh
Q psy1288 412 DGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRD---------FNGIYAIPNIRGGGEYGERWHD 482 (1012)
Q Consensus 412 DG~~i~~~l~~p~~~~~~~~~P~vv~~hGg~~~~~~~~~~~~~~~~l~~---------~G~~v~~~d~RG~g~~g~~~~~ 482 (1012)
.|.+|+.....|+..+..++.--++.+||-++.... -|. +..+|.+ --+-|+++...|-| |.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~E-Fyk--fIPlLT~p~~hg~~~d~~FEVI~PSlPGyg-----wSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVRE-FYK--FIPLLTDPKRHGNESDYAFEVIAPSLPGYG-----WSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHH-HHh--hhhhhcCccccCCccceeEEEeccCCCCcc-----cCc
Confidence 588888888877765444444446678998764421 111 1223322 12678888888754 444
Q ss_pred hhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhCCCceeE
Q psy1288 483 GGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGA 539 (1012)
Q Consensus 483 ~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a 539 (1012)
+.. ..+-+..+-..-..+-+...++ ++..|-|+-+|..++..++.-.|+.+.+
T Consensus 204 ~~s-k~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~G 256 (469)
T KOG2565|consen 204 APS-KTGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLG 256 (469)
T ss_pred CCc-cCCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhH
Confidence 322 2232322211111223344443 7899999999999988888888876543
No 471
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=64.19 E-value=18 Score=41.97 Aligned_cols=99 Identities=18% Similarity=0.187 Sum_probs=54.1
Q ss_pred CCCCcEEEEEcCCCCCCCCCCc-------------Ch----hHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcc
Q psy1288 429 DGNNPCILYGYGGFAVSLQPGF-------------SV----TKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQN 491 (1012)
Q Consensus 429 ~~~~P~vv~~hGg~~~~~~~~~-------------~~----~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 491 (1012)
..++|+++++-||++.+....+ ++ .-..|+. .+ .++.+|..-++||.+.-.++.. .....
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~-~a-dLvFiDqPvGTGfS~a~~~e~~-~d~~~ 174 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLD-FA-DLVFIDQPVGTGFSRALGDEKK-KDFEG 174 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCcccccc-CC-ceEEEecCcccCcccccccccc-cchhc
Confidence 4578999999999876533211 11 1134554 23 4555676656666554111111 11122
Q ss_pred hHhHHHHHHHHHHHc----CCCCCCcEEEEecChHHHHHHHHHh
Q psy1288 492 VFDDFQCAAEYLIAS----GYTQSSRLAIQGGSNGGLLTAACIN 531 (1012)
Q Consensus 492 ~~~D~~a~~~~l~~~----~~~d~~~i~i~G~S~GG~l~~~~~~ 531 (1012)
.-+|+....+.+.+. .. ..++..|.|.|+||+-+...+.
T Consensus 175 ~~~D~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 175 AGKDVYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred cchhHHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHH
Confidence 234665555444332 21 2257889999999987665543
No 472
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=64.12 E-value=7.5 Score=40.02 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=44.4
Q ss_pred eEEEEEcCCCCCCCchh-HHhhhhcCCCcchHhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC
Q psy1288 463 GIYAIPNIRGGGEYGER-WHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR 533 (1012)
Q Consensus 463 ~~v~~~d~RG~g~~g~~-~~~~~~~~~~~~~~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 533 (1012)
..|+.|-||-..-.... -..........-.+.|+.++.++.+++.. +...+.+.|||.|+.+...++...
T Consensus 46 ~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 46 CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHH
Confidence 57777888754422111 00111111223457899999988887642 235688999999999999888654
No 473
>PLN00181 protein SPA1-RELATED; Provisional
Probab=63.96 E-value=4e+02 Score=33.93 Aligned_cols=62 Identities=15% Similarity=0.272 Sum_probs=39.1
Q ss_pred eEeeeEEECC-CCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEe-eCCCeEEEEecC
Q psy1288 157 VSLGSYSFSE-DGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWT-HDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SP-DGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WS-pDG~~l~y~~~~ 223 (1012)
..+..+.|+| ||..|+-+ +.+| .|.++|+.++..............+.|+ ++|..|+..+.+
T Consensus 576 ~~V~~l~~~p~~~~~L~Sg-s~Dg----~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~d 639 (793)
T PLN00181 576 KRVWSIDYSSADPTLLASG-SDDG----SVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSAD 639 (793)
T ss_pred CCEEEEEEcCCCCCEEEEE-cCCC----EEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCC
Confidence 4577899997 67766543 3333 7999999888754322222234567885 567777766543
No 474
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=63.83 E-value=13 Score=35.50 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhh
Q psy1288 495 DFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 495 D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
.+...+..+.+... +.+|.+.|||.||.++..++..
T Consensus 49 ~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 49 QILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 34444444444432 4789999999999988766543
No 475
>KOG0268|consensus
Probab=63.79 E-value=35 Score=37.55 Aligned_cols=59 Identities=15% Similarity=0.283 Sum_probs=39.4
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEec
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~ 222 (1012)
.+....++|--..|+-+...+ ..|.++|+.++.++.-.+-......++|+| ..+-|+..
T Consensus 189 ti~svkfNpvETsILas~~sD----rsIvLyD~R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a 247 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCASD----RSIVLYDLRQASPLKKVILTMRTNTICWNP--EAFNFVAA 247 (433)
T ss_pred ceeEEecCCCcchheeeeccC----CceEEEecccCCccceeeeeccccceecCc--cccceeec
Confidence 456777777776665444322 379999999998876444344446799999 45666653
No 476
>KOG2041|consensus
Probab=63.07 E-value=50 Score=39.54 Aligned_cols=57 Identities=14% Similarity=0.287 Sum_probs=37.2
Q ss_pred eEeeeEEECCCCcEEEEEEeCCC-----CceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSG-----SDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G-----~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
..+.+.+|.-||.+|+.....+. -+-.+||=.++++ ...+.+.||+|.+.++|....
T Consensus 116 SvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg----------~~l~hv~ws~D~~~~Lf~~an 177 (1189)
T KOG2041|consen 116 SVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG----------QLLAHVLWSEDLEQALFKKAN 177 (1189)
T ss_pred cEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch----------heccceeecccHHHHHhhhcC
Confidence 45778999999999988765431 0112444444332 122468999999988887543
No 477
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=62.91 E-value=15 Score=39.74 Aligned_cols=109 Identities=16% Similarity=0.033 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCCCCC---CCCCcChhHHHHHHhCCeEEEEEcCCCCCCCchhHHhhhhcCCCcchHhHHHHHHHHHHHc
Q psy1288 430 GNNPCILYGYGGFAVS---LQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIAS 506 (1012)
Q Consensus 430 ~~~P~vv~~hGg~~~~---~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~a~~~~l~~~ 506 (1012)
+++|+++..|.-.-.. ...-|.....+.+. ..+.++-+|..|..+-....-. + ..-.+.+++...+..+.+.
T Consensus 21 ~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~-~---y~yPsmd~LAe~l~~Vl~~ 95 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPE-G---YQYPSMDQLAEMLPEVLDH 95 (283)
T ss_dssp TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----T-T--------HHHHHCTHHHHHHH
T ss_pred CCCceEEEeccccccchHHHHHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccc-c---ccccCHHHHHHHHHHHHHh
Confidence 4689999999732111 12223334456666 4899999999997653222211 1 1122333333333333332
Q ss_pred CCCCCCcEEEEecChHHHHHHHHHhhCCCceeEEEEccC
Q psy1288 507 GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVG 545 (1012)
Q Consensus 507 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 545 (1012)
- .-+.+..+|--+|+++-.+.+..+|++..+.|...+
T Consensus 96 f--~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~ 132 (283)
T PF03096_consen 96 F--GLKSVIGFGVGAGANILARFALKHPERVLGLILVNP 132 (283)
T ss_dssp H--T---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES-
T ss_pred C--CccEEEEEeeccchhhhhhccccCccceeEEEEEec
Confidence 1 224677889999999999999999999999999876
No 478
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=62.89 E-value=13 Score=38.86 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=17.7
Q ss_pred CCcEEEEecChHHHHHHHHHhh
Q psy1288 511 SSRLAIQGGSNGGLLTAACINQ 532 (1012)
Q Consensus 511 ~~~i~i~G~S~GG~l~~~~~~~ 532 (1012)
..+|.++|||+||+++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3589999999999988666553
No 479
>PRK13614 lipoprotein LpqB; Provisional
Probab=62.65 E-value=68 Score=38.74 Aligned_cols=63 Identities=13% Similarity=0.078 Sum_probs=40.6
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEE-CCCCceeceeec-----ceeeeeeEEeeCCCeEEEEe
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD-VATGKEYPEVLH-----RLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d-l~tg~~~~~t~~-----~~~~~~~~WSpDG~~l~y~~ 221 (1012)
.|..+++|+||-++|..+..+|..+..|-.+- -..|+++.++.. .....+..|..|++ |+..+
T Consensus 435 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~s-l~V~~ 503 (573)
T PRK13614 435 TVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDST-VVVTK 503 (573)
T ss_pred eeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCE-EEEEe
Confidence 59999999999999999987776533332232 245654433211 12346789987765 65554
No 480
>KOG0278|consensus
Probab=62.45 E-value=1.3e+02 Score=31.57 Aligned_cols=172 Identities=15% Similarity=0.156 Sum_probs=85.5
Q ss_pred eEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec--ceeeeeeEEeeCCCeEEEEecCCCCCcccCCCC
Q psy1288 157 VSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH--RLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKK 234 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~--~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~~~ 234 (1012)
..+...+||.|.++|+- +|. .--|+|+|++.-+..+..+. ..++..+.|....+.|+-.+.+.
T Consensus 101 hivk~~af~~ds~~llt----gg~-ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~---------- 165 (334)
T KOG0278|consen 101 HIVKAVAFSQDSNYLLT----GGQ-EKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK---------- 165 (334)
T ss_pred heeeeEEecccchhhhc----cch-HHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC----------
Confidence 35667788888877753 232 23678888876655443322 22345678887777776554332
Q ss_pred CceEEEEeeccc-------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccC-CCceeeeeEEec
Q psy1288 235 NRSSAYHLTVNV-------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEEN-KDDVLDWATCVA 306 (1012)
Q Consensus 235 ~~~l~~~~~~~~-------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 306 (1012)
..+++-+.+... ..+...-+++||+.|-+.-. ..+.-.|..+.+ ++.+. -...++...+..
T Consensus 166 tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~g-----ssV~Fwdaksf~------~lKs~k~P~nV~SASL~P 234 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYG-----SSVKFWDAKSFG------LLKSYKMPCNVESASLHP 234 (334)
T ss_pred ceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecC-----ceeEEecccccc------ceeeccCccccccccccC
Confidence 122332221100 12222236777775544321 112222322211 11010 001122233333
Q ss_pred CCEEEEEEEcCceEEEEEEecCCCceeeee-cCCceEEEeecccccCcEEE
Q psy1288 307 NDKLILSYIHHVKNVMHLHDLASGKHLYTF-PLDVGTIVGFSGKKKYSEIF 356 (1012)
Q Consensus 307 ~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l-~~~~~~v~~~~~spdg~~l~ 356 (1012)
++.+++.-.++ -.++.+|..+|+..... ....+-|..+.++|||...+
T Consensus 235 ~k~~fVaGged--~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yA 283 (334)
T KOG0278|consen 235 KKEFFVAGGED--FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYA 283 (334)
T ss_pred CCceEEecCcc--eEEEEEeccCCceeeecccCCCCceEEEEECCCCceee
Confidence 24555554333 46788898888765543 22256677788999986433
No 481
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=62.05 E-value=6 Score=41.30 Aligned_cols=46 Identities=26% Similarity=0.309 Sum_probs=30.8
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGK 869 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 869 (1012)
+|.+|+|-++|.+|+.++..++++++...... . .+ +.-+.||-+=.
T Consensus 159 ~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-~---------~v-~~h~gGH~vP~ 204 (212)
T PF03959_consen 159 KISIPTLHVIGENDPVVPPERSEALAEMFDPD-A---------RV-IEHDGGHHVPR 204 (212)
T ss_dssp T---EEEEEEETT-SSS-HHHHHHHHHHHHHH-E---------EE-EEESSSSS---
T ss_pred cCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-c---------EE-EEECCCCcCcC
Confidence 67799999999999999999999998888773 2 23 44467897643
No 482
>KOG1523|consensus
Probab=61.91 E-value=2.5e+02 Score=30.81 Aligned_cols=102 Identities=9% Similarity=0.130 Sum_probs=55.2
Q ss_pred EeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCce-ec---eeecceeeeeeEEeeCCCeEEEEecCCCC-Ccc-cC
Q psy1288 158 SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE-YP---EVLHRLKFVSIAWTHDHKGVFYSNQEPKS-KSK-KH 231 (1012)
Q Consensus 158 ~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~-~~---~t~~~~~~~~~~WSpDG~~l~y~~~~~~~-~g~-~~ 231 (1012)
.+...+|++|+..||.+-.. .+|.|+...+... .+ +.........+.|+|-+..|.-.+.+... .=+ .+
T Consensus 12 pitchAwn~drt~iAv~~~~-----~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 12 PITCHAWNSDRTQIAVSPNN-----HEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred ceeeeeecCCCceEEeccCC-----ceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCC
Confidence 46778999999999986543 2455555555541 11 12223345779999999888766544211 000 01
Q ss_pred CCCC-ceEEEEeeccccceeeeeeecCCCEEEEEEC
Q psy1288 232 SKKN-RSSAYHLTVNVAPITSQYITNEGPQFVFKTN 266 (1012)
Q Consensus 232 ~~~~-~~l~~~~~~~~~~i~~~~~s~dg~~l~~~tn 266 (1012)
++.- ..++..+ .| ....+..|+|.++.|++-+.
T Consensus 87 ~~~WkptlvLlR-iN-rAAt~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 87 GGTWKPTLVLLR-IN-RAATCVKWSPKENKFAVGSG 120 (361)
T ss_pred CCeeccceeEEE-ec-cceeeEeecCcCceEEeccC
Confidence 1110 0111111 11 12223359999998888763
No 483
>KOG1454|consensus
Probab=61.69 E-value=5.7 Score=44.50 Aligned_cols=45 Identities=20% Similarity=0.121 Sum_probs=36.1
Q ss_pred CCC-CceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQY-PATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~-~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
++. .|+||++|+.|.-+|..++..|-..+ - -+++++-++.||-.-
T Consensus 261 ~i~~~pvlii~G~~D~~~p~~~~~~~~~~~----p-------n~~~~~I~~~gH~~h 306 (326)
T KOG1454|consen 261 KIWKCPVLIIWGDKDQIVPLELAEELKKKL----P-------NAELVEIPGAGHLPH 306 (326)
T ss_pred cccCCceEEEEcCcCCccCHHHHHHHHhhC----C-------CceEEEeCCCCcccc
Confidence 566 99999999999999999666664333 1 568999999999764
No 484
>KOG0639|consensus
Probab=60.31 E-value=73 Score=36.63 Aligned_cols=55 Identities=15% Similarity=0.151 Sum_probs=37.9
Q ss_pred eeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeec-ceeeeeeEEeeCCCeEEE
Q psy1288 160 GSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLH-RLKFVSIAWTHDHKGVFY 219 (1012)
Q Consensus 160 ~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~-~~~~~~~~WSpDG~~l~y 219 (1012)
-..++|||.| ++|+.-.+| +|.|||+......+.-.+ ..+.+.+.-|+||..|.-
T Consensus 513 yALa~spDak-vcFsccsdG----nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWT 568 (705)
T KOG0639|consen 513 YALAISPDAK-VCFSCCSDG----NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWT 568 (705)
T ss_pred hhhhcCCccc-eeeeeccCC----cEEEEEcccceeeecccCCCCCceeEEecCCCceeec
Confidence 3678999975 567777666 689999987665442222 223467888899987754
No 485
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=60.26 E-value=18 Score=43.04 Aligned_cols=39 Identities=15% Similarity=0.131 Sum_probs=31.0
Q ss_pred cCCCCCCCCCCCCCCCCCCCceEEEcccCCCCCCCcchHHHHHHHHHH
Q psy1288 797 GYSPLHNIQGPNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEK 844 (1012)
Q Consensus 797 ~~Sp~~~v~~~~~~~~~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~ 844 (1012)
..+-....+ +|+.|+|++.|=.|. -...+.++|+.++.+
T Consensus 241 ~~~~~~d~~-------~i~vP~L~i~gW~D~--~l~~~~~~~~~~~~r 279 (563)
T COG2936 241 RGDRVADLS-------KIKVPALVIGGWSDG--YLHTAIKLFAFLRSR 279 (563)
T ss_pred ccCcccccc-------cCCCcEEEEcccccc--cccchHHHhhhcccC
Confidence 344455555 788999999999997 667788899999886
No 486
>KOG0283|consensus
Probab=59.82 E-value=88 Score=38.20 Aligned_cols=33 Identities=24% Similarity=0.224 Sum_probs=23.3
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCC
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT 192 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~t 192 (1012)
+...|-...||||||+||-. ++..-|+||-+-.
T Consensus 266 h~gaIw~mKFS~DGKyLAsa-----GeD~virVWkVie 298 (712)
T KOG0283|consen 266 HKGAIWAMKFSHDGKYLASA-----GEDGVIRVWKVIE 298 (712)
T ss_pred cCCcEEEEEeCCCCceeeec-----CCCceEEEEEEec
Confidence 34567889999999999852 3344677776544
No 487
>KOG1408|consensus
Probab=59.32 E-value=1.9e+02 Score=35.06 Aligned_cols=31 Identities=23% Similarity=0.365 Sum_probs=21.5
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECC
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVA 191 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~ 191 (1012)
.+.+..+++||||++||= -++.| +|+|++|.
T Consensus 459 r~G~R~~~vSp~gqhLAs-GDr~G----nlrVy~Lq 489 (1080)
T KOG1408|consen 459 RFGFRALAVSPDGQHLAS-GDRGG----NLRVYDLQ 489 (1080)
T ss_pred ccceEEEEECCCcceecc-cCccC----ceEEEEeh
Confidence 467789999999999984 23333 56666654
No 488
>KOG1524|consensus
Probab=58.78 E-value=1.6e+02 Score=34.40 Aligned_cols=26 Identities=19% Similarity=0.194 Sum_probs=19.2
Q ss_pred ecCC-ceEEEeecccccCcEEEEEecC
Q psy1288 336 FPLD-VGTIVGFSGKKKYSEIFYSFMS 361 (1012)
Q Consensus 336 l~~~-~~~v~~~~~spdg~~l~~~~ss 361 (1012)
+..| .|++..++||+||.++....+.
T Consensus 251 ~~~p~~GSifnlsWS~DGTQ~a~gt~~ 277 (737)
T KOG1524|consen 251 FSSPRVGSIFNLSWSADGTQATCGTST 277 (737)
T ss_pred ecCCCccceEEEEEcCCCceeeccccC
Confidence 4445 6888888999999887766544
No 489
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.82 E-value=2.1e+02 Score=30.90 Aligned_cols=62 Identities=8% Similarity=0.042 Sum_probs=40.0
Q ss_pred eeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceee--ccee-eeeeEEeeCCCeEEEEecC
Q psy1288 159 LGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL--HRLK-FVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 159 i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~--~~~~-~~~~~WSpDG~~l~y~~~~ 223 (1012)
-.++.++|--++.++...+.|. -.+++|..+++..+... ++.. ++-=.|||||+.||-+.++
T Consensus 70 ~Hgi~~~p~~~ravafARrPGt---f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEnd 134 (366)
T COG3490 70 GHGIAFHPALPRAVAFARRPGT---FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATEND 134 (366)
T ss_pred cCCeecCCCCcceEEEEecCCc---eEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCC
Confidence 3467888887776666666664 56788998877544222 1111 3455899999877666543
No 490
>KOG0310|consensus
Probab=57.69 E-value=3.5e+02 Score=31.26 Aligned_cols=63 Identities=11% Similarity=0.074 Sum_probs=44.0
Q ss_pred CceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecc-ee-eeeeEEeeCCCeEEEEec
Q psy1288 155 GTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR-LK-FVSIAWTHDHKGVFYSNQ 222 (1012)
Q Consensus 155 g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~-~~-~~~~~WSpDG~~l~y~~~ 222 (1012)
+...+....++|+++.++-+.+.+. .+.++|+.++.. +..+.+ .. ....+|+|-...|+++..
T Consensus 109 h~apv~~~~f~~~d~t~l~s~sDd~----v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtGs 173 (487)
T KOG0310|consen 109 HQAPVHVTKFSPQDNTMLVSGSDDK----VVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTGS 173 (487)
T ss_pred ccCceeEEEecccCCeEEEecCCCc----eEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEecC
Confidence 3456778899999999887665443 667778888776 433332 22 356789999888988853
No 491
>KOG0313|consensus
Probab=57.63 E-value=2.1e+02 Score=32.04 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=45.9
Q ss_pred ceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEECCCCceeceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 156 TVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 156 ~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
...++++.|++ ..++|+++.+ .+|.++||++|........+..+..+.-+|+.+.|+-.+
T Consensus 260 t~~Vs~V~w~d--~~v~yS~SwD----HTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gs 319 (423)
T KOG0313|consen 260 TEPVSSVVWSD--ATVIYSVSWD----HTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGS 319 (423)
T ss_pred ccceeeEEEcC--CCceEeeccc----ceEEEEEeecccceeeeecCcceeEeecccccceeeecC
Confidence 45788999999 6788988864 389999999998765444555577888899887666554
No 492
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=57.41 E-value=8.6 Score=45.93 Aligned_cols=45 Identities=20% Similarity=0.177 Sum_probs=34.0
Q ss_pred CCCCceEEEcccCCCCCCCcchHHHHHHHHHHhcCCCCCCCCEEEEEeCCCCCCCC
Q psy1288 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGG 868 (1012)
Q Consensus 813 ~~~~p~l~~~g~~D~rv~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~gH~~~ 868 (1012)
+|+.|+|+++|++|.-||...+..+.+.+. - . ..++.++.||-..
T Consensus 413 ~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~---~-------~-~~~vL~~sGHi~~ 457 (532)
T TIGR01838 413 KVKVPVYIIATREDHIAPWQSAYRGAALLG---G-------P-KTFVLGESGHIAG 457 (532)
T ss_pred hCCCCEEEEeeCCCCcCCHHHHHHHHHHCC---C-------C-EEEEECCCCCchH
Confidence 678999999999999999988877644332 1 2 3457789999754
No 493
>KOG0302|consensus
Probab=56.37 E-value=1.3e+02 Score=33.54 Aligned_cols=57 Identities=23% Similarity=0.289 Sum_probs=36.8
Q ss_pred eEEECCCCcEEEEEEeCCCCceEEEEEEECCCCcee----ceeecceeeeeeEEeeCCCeEEEEe
Q psy1288 161 SYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEY----PEVLHRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 161 ~~~~SPDGk~iAy~~~~~G~~~~~L~v~dl~tg~~~----~~t~~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
++.||| +.++.--.|+-...|+++...+|... +.+....+.-.++|||-.+.++++.
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaSc 276 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASC 276 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEee
Confidence 678998 33333334554567888888777643 3333333456789999988888875
No 494
>KOG1920|consensus
Probab=56.12 E-value=5.8e+02 Score=33.27 Aligned_cols=20 Identities=25% Similarity=0.268 Sum_probs=17.2
Q ss_pred eEeeeEEECCCCcEEEEEEe
Q psy1288 157 VSLGSYSFSEDGKTLAYCLS 176 (1012)
Q Consensus 157 ~~i~~~~~SPDGk~iAy~~~ 176 (1012)
..+...+||||++.+|+...
T Consensus 110 ~GI~aaswS~Dee~l~liT~ 129 (1265)
T KOG1920|consen 110 NGISAASWSPDEELLALITG 129 (1265)
T ss_pred CceEEEeecCCCcEEEEEeC
Confidence 36789999999999998765
No 495
>KOG0277|consensus
Probab=55.98 E-value=2.8e+02 Score=29.50 Aligned_cols=189 Identities=14% Similarity=0.134 Sum_probs=91.1
Q ss_pred eEEECC--CCcEEEEEEeC---CCCceEEEEEEECCCCceecee--ec-ceeeeeeEEeeCCCeEEEEecCCCCCcccCC
Q psy1288 161 SYSFSE--DGKTLAYCLSS---SGSDWTSMHFKDVATGKEYPEV--LH-RLKFVSIAWTHDHKGVFYSNQEPKSKSKKHS 232 (1012)
Q Consensus 161 ~~~~SP--DGk~iAy~~~~---~G~~~~~L~v~dl~tg~~~~~t--~~-~~~~~~~~WSpDG~~l~y~~~~~~~~g~~~~ 232 (1012)
++++|| +++..+-++.. .|+. .|+|.+++.++-+++. .. ......++||+....++++....
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~G--~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GD-------- 82 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGNG--RLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGD-------- 82 (311)
T ss_pred eeEecccccchhheeehhhcccccCc--eEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecC--------
Confidence 578888 55544433332 2333 8999999644433321 11 11246789999888888876431
Q ss_pred CCCceEEEEeeccc----------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCcccCcEEeeccCCCceeeee
Q psy1288 233 KKNRSSAYHLTVNV----------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWA 302 (1012)
Q Consensus 233 ~~~~~l~~~~~~~~----------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~~~~~l~~~~~~~~~~~~ 302 (1012)
..-+++- ..... ..+-...|.+-.++.++++.-+. ..+|+..+..+. ..+. .....-+++..
T Consensus 83 -GSLrl~d-~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~-TiKLW~~~r~~S----v~Tf-~gh~~~Iy~a~ 154 (311)
T KOG0277|consen 83 -GSLRLFD-LTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDG-TIKLWDPNRPNS----VQTF-NGHNSCIYQAA 154 (311)
T ss_pred -ceEEEec-cCCCCcchhHHHhhhhheEEeccccccceeEEeeccCC-ceEeecCCCCcc----eEee-cCCccEEEEEe
Confidence 1122221 10000 11112235555556666664432 345555444321 2222 22223344433
Q ss_pred EEecCCEEEEEEEcCceEEEEEEecC-CCceeeeecCCceEEEeecccccCcEEEEEecCCCCCcEEEEEeC
Q psy1288 303 TCVANDKLILSYIHHVKNVMHLHDLA-SGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNI 373 (1012)
Q Consensus 303 ~~~~~~~l~~~~~~~g~~~l~~~dl~-~G~~~~~l~~~~~~v~~~~~spdg~~l~~~~ss~~~p~~l~~~d~ 373 (1012)
..+....++.+...++ .+.+||+. .|+.. .|+.+...+..-.|+.-...++++.... ..|+.+|+
T Consensus 155 ~sp~~~nlfas~Sgd~--~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd---~~vr~wDi 220 (311)
T KOG0277|consen 155 FSPHIPNLFASASGDG--TLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVLATGGVD---NLVRGWDI 220 (311)
T ss_pred cCCCCCCeEEEccCCc--eEEEEEecCCCcee-EEEeccceeEeecccccCCcEEEecCCC---ceEEEEeh
Confidence 3333234555544444 45555553 35543 3554444455567776666666554432 24677777
No 496
>PRK13615 lipoprotein LpqB; Provisional
Probab=55.41 E-value=1.3e+02 Score=36.12 Aligned_cols=108 Identities=12% Similarity=0.064 Sum_probs=59.3
Q ss_pred CCCCCCeeeCCEEEEEEEcCCCCeeEEEEEeCCCCceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEE
Q psy1288 106 PKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSM 185 (1012)
Q Consensus 106 ~~~s~p~~dG~~~yy~~~~~~~~~~~l~~~~~~~g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L 185 (1012)
.....|+.+..-+.|+-.++ + ...+.+ ....|+...+ ....+. ...|..+++|+||-++|..++.+|.....|
T Consensus 373 ~~Lt~PS~d~~g~vWtv~~g-~-~~~l~~-~~~~G~~~~v-~v~~~~---~~~I~~lrvSrDG~R~Avi~~~~g~~~V~v 445 (557)
T PRK13615 373 PGLVAPSLDAQGYVWSTPAS-D-PRGLVA-WGPDGVGHPV-AVSWTA---TGRVVSLEVARDGARVLVQLETGAGPQLLV 445 (557)
T ss_pred CccccCcCcCCCCEEEEeCC-C-ceEEEE-ecCCCceEEe-eccccC---CCeeEEEEeCCCccEEEEEEecCCCCEEEE
Confidence 35677776654344454443 2 233333 3333444332 322221 136999999999999999988777654444
Q ss_pred EEEECCCCceece-ee------cceeeeeeEEeeCCCeEEEEe
Q psy1288 186 HFKDVATGKEYPE-VL------HRLKFVSIAWTHDHKGVFYSN 221 (1012)
Q Consensus 186 ~v~dl~tg~~~~~-t~------~~~~~~~~~WSpDG~~l~y~~ 221 (1012)
-.+--.++.++.+ +. ......+..|..|++ |+.+.
T Consensus 446 a~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~-laVl~ 487 (557)
T PRK13615 446 ASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELD-VATLT 487 (557)
T ss_pred EEEEeCCCcceEeeeccEEcccCcCcceeeEEcCCCE-EEEEe
Confidence 3333344533222 11 112346789988775 66665
No 497
>KOG1009|consensus
Probab=54.97 E-value=49 Score=37.05 Aligned_cols=96 Identities=19% Similarity=0.172 Sum_probs=51.5
Q ss_pred cCCCCeeEEEEEeCCC--CceEEEcCCCCCCCCCceEeeeEEECCCCcEEEEEEeCCCCceEEEEEEE------CCC---
Q psy1288 124 TGLQNHSVMYIQDSLD--GEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKD------VAT--- 192 (1012)
Q Consensus 124 ~~~~~~~~l~~~~~~~--g~~~~L~D~n~la~~g~~~i~~~~~SPDGk~iAy~~~~~G~~~~~L~v~d------l~t--- 192 (1012)
.+++.+-.||...... +.-..+.-...|+. +...+..++|||+|..+|=..+. | ..-||... .++
T Consensus 32 ~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~-H~~aVN~vRf~p~gelLASg~D~-g--~v~lWk~~~~~~~~~d~e~~ 107 (434)
T KOG1009|consen 32 AGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSR-HTRAVNVVRFSPDGELLASGGDG-G--EVFLWKQGDVRIFDADTEAD 107 (434)
T ss_pred ccCccceeeeeeeecCCCCCceeEEEeecccC-CcceeEEEEEcCCcCeeeecCCC-c--eEEEEEecCcCCccccchhh
Confidence 4455667888875432 21112222222332 34578899999999999843322 1 23444433 223
Q ss_pred --Cce-e---ceeecceeeeeeEEeeCCCeEEEEecC
Q psy1288 193 --GKE-Y---PEVLHRLKFVSIAWTHDHKGVFYSNQE 223 (1012)
Q Consensus 193 --g~~-~---~~t~~~~~~~~~~WSpDG~~l~y~~~~ 223 (1012)
.+. + .+..........+|+||+..+.+.+.+
T Consensus 108 ~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d 144 (434)
T KOG1009|consen 108 LNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD 144 (434)
T ss_pred hCccceEEEEEecccccchhhhhccCCCceeeeeecc
Confidence 110 0 011112234678999999988777644
No 498
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.40 E-value=30 Score=38.55 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=34.8
Q ss_pred HhHHHHHHHHHHHcCCCCCCcEEEEecChHHHHHHHHHhhC--------CCceeEEEEccC
Q psy1288 493 FDDFQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQR--------PDLFGAAIVQVG 545 (1012)
Q Consensus 493 ~~D~~a~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--------p~~f~a~v~~~~ 545 (1012)
..++...+++|..... ..+|.|+.||||.++++.++.+. +..++-+|..+|
T Consensus 174 r~aLe~~lr~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaP 232 (377)
T COG4782 174 RPALERLLRYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAP 232 (377)
T ss_pred HHHHHHHHHHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCC
Confidence 3466677777776643 46899999999999988776542 223455555555
No 499
>KOG0307|consensus
Probab=54.08 E-value=87 Score=39.73 Aligned_cols=198 Identities=9% Similarity=0.003 Sum_probs=0.0
Q ss_pred EeeeEEECCCCcEE--------EEEEeCCCCceEEEEEEECCCCc----eeceeecceeeeeeEEeeCCCe----EEEEe
Q psy1288 158 SLGSYSFSEDGKTL--------AYCLSSSGSDWTSMHFKDVATGK----EYPEVLHRLKFVSIAWTHDHKG----VFYSN 221 (1012)
Q Consensus 158 ~i~~~~~SPDGk~i--------Ay~~~~~G~~~~~L~v~dl~tg~----~~~~t~~~~~~~~~~WSpDG~~----l~y~~ 221 (1012)
+-..++|||+++.+ .|-.+..-+...+||.+|..+.+ ...-.....+|...+|++-|+. |+
T Consensus 8 Rta~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIa--- 84 (1049)
T KOG0307|consen 8 RTATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIA--- 84 (1049)
T ss_pred ccceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceee---
Q ss_pred cCCCCCcccCCCCCceEEEEeeccc----------------cceeeeeeecCCCEEEEEECCCCCCceEEEEeCCCCccc
Q psy1288 222 QEPKSKSKKHSKKNRSSAYHLTVNV----------------APITSQYITNEGPQFVFKTNKDAPNYRLITIDFDNFAES 285 (1012)
Q Consensus 222 ~~~~~~g~~~~~~~~~l~~~~~~~~----------------~~i~~~~~s~dg~~l~~~tn~~~~~~~L~~~dl~~~~~~ 285 (1012)
.+.++-.+.+..+... ..+....|.+..+-++-.. +.+.+|+..|+.+++
T Consensus 85 ---------GG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASG---a~~geI~iWDlnn~~-- 150 (1049)
T KOG0307|consen 85 ---------GGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASG---ADDGEILIWDLNKPE-- 150 (1049)
T ss_pred ---------ccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeecc---CCCCcEEEeccCCcC--
Q ss_pred CcEEeeccCCCceeeeeEEecCCEEEEEEEcCceEEEEEEecCCCceeeeecCC--ceEEEeecccccCcEEEEEecCCC
Q psy1288 286 NWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLD--VGTIVGFSGKKKYSEIFYSFMSFL 363 (1012)
Q Consensus 286 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~~~dl~~G~~~~~l~~~--~~~v~~~~~spdg~~l~~~~ss~~ 363 (1012)
..-..-....-.-+..+.|.. +.=-+........+..+||+...+..-.+... ...++.+.|.|+..+-+++++...
T Consensus 151 tP~~~~~~~~~~eI~~lsWNr-kvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd 229 (1049)
T KOG0307|consen 151 TPFTPGSQAPPSEIKCLSWNR-KVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDD 229 (1049)
T ss_pred CCCCCCCCCCcccceEeccch-hhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCC
Q ss_pred CCcEEEEEeC
Q psy1288 364 QPTIIFHCNI 373 (1012)
Q Consensus 364 ~p~~l~~~d~ 373 (1012)
.-+.|-..|+
T Consensus 230 ~~PviqlWDl 239 (1049)
T KOG0307|consen 230 SAPVIQLWDL 239 (1049)
T ss_pred CCceeEeecc
No 500
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=53.59 E-value=19 Score=35.11 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=20.1
Q ss_pred CCCcEEEEecChHHHHHHHHHhhCC
Q psy1288 510 QSSRLAIQGGSNGGLLTAACINQRP 534 (1012)
Q Consensus 510 d~~~i~i~G~S~GG~l~~~~~~~~p 534 (1012)
...+|.+.|||+||.++..++....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 4578999999999999887765543
Done!