RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1288
(1012 letters)
>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain
{Pig (Sus scrofa) [TaxId: 9823]}
Length = 430
Score = 198 bits (503), Expect = 6e-56
Identities = 133/435 (30%), Positives = 193/435 (44%), Gaps = 80/435 (18%)
Query: 33 MTKFEYPKARKNESLVDEYHGVKIPDPYGWMEDPDSEETKKFVDEENAISRPYLEDHPDR 92
M F+YP ++E+ + +YHG K+ DPY W+EDPDSE+TK FV+ +N I+ P+LE P R
Sbjct: 1 MLSFQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIR 60
Query: 93 DKVKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQ------------------------- 127
K +T+++DYPKYS ++G YF+F+NTGLQ
Sbjct: 61 GLYKERMTELYDYPKYSCHFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILS 120
Query: 128 ---------------NHSVMYIQDSLDGEARVFLDPNNLSD------DGTVSLGSYSFSE 166
Y + + V +++
Sbjct: 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTH 180
Query: 167 DGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRL----KFVSIAWTHDHKGVFY--- 219
DGK + Y + T H L + + +
Sbjct: 181 DGKGMFYNAYPQQDGKSDGTETS--TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238
Query: 220 SNQEPKSKSKKHSKKNRSSAYHLTVNVAPITS--------------------QYITNEGP 259
+ ++ L S Y+TNEG
Sbjct: 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGT 298
Query: 260 QFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVK 319
F FKTN+ +PNYRLI IDF + ES WK L+ E++ DVL+W CV ++ L+L Y+H VK
Sbjct: 299 VFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVK 358
Query: 320 NVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDP 379
N + LHDLA+G L FPL+VG++VG+SG+KK +EIFY F SFL P II+HC++
Sbjct: 359 NTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE--- 415
Query: 380 NSKLETSIFREIKVP 394
+LE +FRE+ V
Sbjct: 416 --ELEPRVFREVTVK 428
Score = 42.6 bits (99), Expect = 2e-04
Identities = 52/246 (21%), Positives = 83/246 (33%), Gaps = 42/246 (17%)
Query: 725 RYPETPNKADGSENVRNQDQKLYYHYLGTDQKDDILIAEVLDMLKFNKFTIGYFWESDYG 784
YP+ K+DG+E N QKLYYH LGTDQ +DIL AE + Y
Sbjct: 189 AYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDEPKWMGGAELSDDGRYV 247
Query: 785 SPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLM-------TADHDDRVSPVHSLKF 837
+ + + Q N + G L+ ++ V + +
Sbjct: 248 LLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRH 307
Query: 838 AATLQEKLRDYP----HQTNPLLIRIETKAGHGGGKPTTKQLCVRYMMGGHFTVEFI--- 890
+ + D+ + L+ E + L + Y+ T++
Sbjct: 308 SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLA 367
Query: 891 ---------------------RSVTTIR-TFMSFLQPTIIFHCNIPARVDPNSKLETSIF 928
+ T I F SFL P II+HC++ +LE +F
Sbjct: 368 TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE-----ELEPRVF 422
Query: 929 REIKVP 934
RE+ V
Sbjct: 423 REVTVK 428
>d1qfma2 c.69.1.4 (A:431-710) Prolyl oligopeptidase, C-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 280
Score = 124 bits (312), Expect = 3e-32
Identities = 162/321 (50%), Positives = 197/321 (61%), Gaps = 50/321 (15%)
Query: 397 DPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIV 456
D S ++T Q+FYPSKDGTKIPMFI+ +KG +LDG++P LYGYGGF +S+ P +SV++++
Sbjct: 1 DASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLI 60
Query: 457 FLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAI 516
F+R G+ A+ NIRGGGEYGE WH GG L NKQN FDDFQCAAEYLI GYT RL I
Sbjct: 61 FVRHMGGVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTI 120
Query: 517 QGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDT 576
GGSNGGLL A C NQRPDLFG I QVG
Sbjct: 121 NGGSNGGLLVATCANQRPDLFGCVIAQVGV------------------------------ 150
Query: 577 IPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQ 636
+DMLKF+K+TIG+ W +DYG + FE+L+ YSPLHN++
Sbjct: 151 -------------------MDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVK 191
Query: 637 GPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGH 696
E QYP+ LL+TADHDDRV P+HSLKF ATLQ + Q NPLLI ++TKAGH
Sbjct: 192 -LPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGH 250
Query: 697 GGGKPTTKQFPLTIPVIYFYL 717
G GKPT K + F
Sbjct: 251 GAGKPTAKVIEEVSDMFAFIA 271
Score = 72.5 bits (176), Expect = 2e-14
Identities = 34/55 (61%), Positives = 45/55 (81%)
Query: 937 DPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS 991
D S ++T Q+FYPSKDGTKIPMFI+ +KG +LDG++P LYGYGGF +S+ P +S
Sbjct: 1 DASDYQTVQIFYPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYS 55
Score = 65.2 bits (157), Expect = 6e-12
Identities = 63/110 (57%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Query: 766 DMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYSPLHNIQGPNELKGKQYPATLLMTADH 825
DMLKF+K+TIG+ W +DYG + FE+L+ YSPLHN++ P QYP+ LL+TADH
Sbjct: 152 DMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEA-DDIQYPSMLLLTADH 210
Query: 826 DDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQL 875
DDRV P+HSLKF ATLQ + Q NPLLI ++TKAGHG GKPT K +
Sbjct: 211 DDRVVPLHSLKFIATLQYIVGRSRKQNNPLLIHVDTKAGHGAGKPTAKVI 260
>d2hu7a2 c.69.1.33 (A:322-581) Acylamino-acid-releasing enzyme,
C-terminal donain {Aeropyrum pernix [TaxId: 56636]}
Length = 260
Score = 60.7 bits (145), Expect = 1e-10
Identities = 24/207 (11%), Positives = 52/207 (25%), Gaps = 2/207 (0%)
Query: 395 DFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTK 454
D S+ ++ V+ S DG+++P ++L A P ++ +GG +
Sbjct: 4 DLRRSIAGSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWDTFA 61
Query: 455 IVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRL 514
+ G E + D A + ++ +
Sbjct: 62 ASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLASELYIM 121
Query: 515 AIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCDL 574
G L A V E+ + + ++
Sbjct: 122 GYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTGGSREIMRS 181
Query: 575 DTIPDRKIEGKLPLTQVVHKVLDMLKF 601
+ + K PL + +
Sbjct: 182 RSPINHVDRIKEPLALIHPQNDSRTPL 208
Score = 59.1 bits (141), Expect = 5e-10
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 935 DFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS 991
D S+ ++ V+ S DG+++P ++L A P ++ +GG +
Sbjct: 4 DLRRSIAGSRLVWVESFDGSRVPTYVLESGRA--PTPGPTVVLVHGGPFAEDSDSWD 58
>d1l7aa_ c.69.1.25 (A:) Cephalosporin C deacetylase {Bacillus
subtilis [TaxId: 1423]}
Length = 318
Score = 52.5 bits (124), Expect = 1e-07
Identities = 36/326 (11%), Positives = 71/326 (21%), Gaps = 79/326 (24%)
Query: 390 EIKVPDFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPG 449
+++ D+ + ++ Y S +I + G +P I+ +G A
Sbjct: 43 DLQPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKE---GPHPAIVKYHGYNASY---D 96
Query: 450 FSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRL--------------LNKQNVFDD 495
+ ++V +RG + + V+ D
Sbjct: 97 GEIHEMVNWALHGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGVYLD 156
Query: 496 FQCAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRW 555
A E + + +R+ + GGS GG LT A A
Sbjct: 157 AVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFERAIDV 216
Query: 556 LIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYG 615
+ + + S
Sbjct: 217 ALEQPYLEINSFFRR---------------------------------------NGSPET 237
Query: 616 SPANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEK 675
Y + ++ P L+ D P L+ K
Sbjct: 238 EVQAMKTLSYFDIMNLADRVKVP----------VLMSIGLIDKVTPPSTVFAAYNHLETK 287
Query: 676 LRDYPHQTNPLLIRIETKAGHGGGKP 701
+++ GH
Sbjct: 288 KE----------LKVYRYFGHEYIPA 303
Score = 32.4 bits (72), Expect = 0.26
Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 930 EIKVPDFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFA 983
+++ D+ + ++ Y S +I + G +P I+ +G A
Sbjct: 43 DLQPVDYPADGVKVYRLTYKSFGNARITGWYAVPDKE---GPHPAIVKYHGYNA 93
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 52.3 bits (124), Expect = 1e-07
Identities = 26/159 (16%), Positives = 43/159 (27%), Gaps = 11/159 (6%)
Query: 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCI--LYGYGGFAVSLQPGFSVTKIVFLR 459
E QV PS G I + S N+P + L G + +
Sbjct: 10 EYLQVPSPS-MGRDIKVQFQSG-----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYD 63
Query: 460 DFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAE---YLIASGYTQSSRLAI 516
+P Y + + Q + +E +L A+ + + + A+
Sbjct: 64 QSGLSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAV 123
Query: 517 QGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRW 555
G S P F A G + S
Sbjct: 124 VGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGP 162
>d1vlqa_ c.69.1.25 (A:) Acetyl xylan esterase TM0077 {Thermotoga
maritima [TaxId: 2336]}
Length = 322
Score = 52.4 bits (124), Expect = 1e-07
Identities = 41/324 (12%), Positives = 63/324 (19%), Gaps = 80/324 (24%)
Query: 395 DFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYG-------------- 440
+ E V + G +I ++L K + PC++ G
Sbjct: 47 ESHLKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFPHDWLFW 104
Query: 441 ---GFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQ 497
G+ + D P + R R + VF D
Sbjct: 105 PSMGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAV 164
Query: 498 CAAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLI 557
A E + R+ I GGS GG + A + D
Sbjct: 165 RAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSKKAKAL---------LCDVPFLCH 215
Query: 558 VHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSP 617
+ + +
Sbjct: 216 FRRAVQLVDTHPYA--------------------------------EITNFLKTHRDKEE 243
Query: 618 ANSSQFEYLLGYSPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLR 677
Y G + + P L D+ P
Sbjct: 244 IVFRTLSYFDGVNFAARAKIP----------ALFSVGLMDNICPPSTVFAAYNYYAG--- 290
Query: 678 DYPHQTNPLLIRIETKAGHGGGKP 701
P IRI H GG
Sbjct: 291 -------PKEIRIYPYNNHEGGGS 307
Score = 35.8 bits (81), Expect = 0.019
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 935 DFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF 990
+ E V + G +I ++L K + PC++ G P
Sbjct: 47 ESHLKTVEAYDVTFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRGFPHD 100
Score = 30.8 bits (68), Expect = 0.82
Identities = 11/68 (16%), Positives = 16/68 (23%), Gaps = 10/68 (14%)
Query: 813 KQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTT 872
+ L D+ P P IRI H GG
Sbjct: 260 RAKIPALFSVGLMDNICPPSTVFAAYNYYAG----------PKEIRIYPYNNHEGGGSFQ 309
Query: 873 KQLCVRYM 880
V+++
Sbjct: 310 AVEQVKFL 317
>d1xfda2 c.69.1.24 (A:592-849) Dipeptidyl aminopeptidase-like
protein 6, DPP6, C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 258
Score = 51.3 bits (121), Expect = 2e-07
Identities = 29/179 (16%), Positives = 58/179 (32%), Gaps = 8/179 (4%)
Query: 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGG-FAVSLQPGFSVT-KIVFLRD 460
+ D +PM IL + P +L G + S+ F V+ + V +
Sbjct: 2 KVEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSS 61
Query: 461 FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGS 520
+ + RG G G + R D A ++ Y +R+A+ G
Sbjct: 62 HGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKD 121
Query: 521 NGGLLTAACINQRPDL------FGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFCD 573
GG L+ + + + G+A+ + + ++ + N +
Sbjct: 122 YGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYEMTK 180
Score = 33.2 bits (74), Expect = 0.11
Identities = 8/39 (20%), Positives = 12/39 (30%)
Query: 943 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGG 981
+ D +PM IL + P +L G
Sbjct: 2 KVEYRDIEIDDYNLPMQILKPATFTDTTHYPLLLVVDGT 40
Score = 29.3 bits (64), Expect = 2.3
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 7/61 (11%)
Query: 821 MTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHGGGKPTTKQLCVRYM 880
+ D+++ H+ + L +Y Q P H + KQ R +
Sbjct: 196 IHPTADEKIHFQHTAELITQLIRGKANYSLQIYP-------DESHYFTSSSLKQHLYRSI 248
Query: 881 M 881
+
Sbjct: 249 I 249
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 47.6 bits (112), Expect = 3e-06
Identities = 22/160 (13%), Positives = 34/160 (21%), Gaps = 15/160 (9%)
Query: 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCI--LYGYGGFAVSLQPGFSVTKIVFLR 459
E QV S G I + G + L G +
Sbjct: 7 EYLQVPSAS-MGRDIKVQFQG-------GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYY 58
Query: 460 DFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLI----ASGYTQSSRLA 515
+P Y W+ + + + + A+ + A
Sbjct: 59 QSGLSVIMPVGGQSSFYT-DWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNA 117
Query: 516 IQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRW 555
G S G P F A G S+
Sbjct: 118 AVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWP 157
>d2bgra2 c.69.1.24 (A:509-766) Dipeptidyl peptidase IV/CD26,
C-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 258
Score = 47.1 bits (110), Expect = 4e-06
Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 5/172 (2%)
Query: 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGG-FAVSLQPGFSVTKIVFL-RD 460
+K++ + + TK ++ P +L Y G + F + +L
Sbjct: 3 SKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLAST 62
Query: 461 FNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSSRLAIQGGS 520
N I A + RG G G++ +D AA G+ + R+AI G S
Sbjct: 63 ENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWS 122
Query: 521 NGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFHFC 572
GG +T+ + +F I +S + V+T +
Sbjct: 123 YGGYVTSMVLGSGSGVFKCGIAVAP---VSRWEYYDSVYTERYMGLPTPEDN 171
Score = 31.7 bits (70), Expect = 0.34
Identities = 7/48 (14%), Positives = 15/48 (31%)
Query: 943 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGF 990
+K++ + + TK ++ P +L Y G
Sbjct: 3 SKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTV 50
>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 267
Score = 44.1 bits (103), Expect = 5e-05
Identities = 33/168 (19%), Positives = 47/168 (27%), Gaps = 19/168 (11%)
Query: 401 FETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCI--LYGYGGFAVSLQPGFSVTKIVFL 458
+E V PS G IP+ L+ G + L + + + L
Sbjct: 4 YENLMVPSPS-MGRDIPVAFLA-------GGPHAVYLLDAFNAGPDVSNWVTAGNAMNTL 55
Query: 459 RDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDF--QCAAEYLIASGYTQSSRLAI 516
P G W G +D F ++L A+ A
Sbjct: 56 AGKGISVVAPA-GGAYSMYTNWEQDGS-----KQWDTFLSAELPDWLAANRGLAPGGHAA 109
Query: 517 QGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISD-CGRWLIVHTMKD 563
G + GG A PD FG A G S+ I M+
Sbjct: 110 VGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQ 157
>d1wb4a1 c.69.1.2 (A:803-1075) Feruloyl esterase domain of the
cellulosomal xylanase y {Clostridium thermocellum
[TaxId: 1515]}
Length = 273
Score = 38.6 bits (88), Expect = 0.003
Identities = 22/231 (9%), Positives = 55/231 (23%), Gaps = 18/231 (7%)
Query: 402 ETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCI--LYGYGGFAVSLQPGFSVTKIVFLR 459
+ Y +GTK + + G + ++G G ++ + +
Sbjct: 26 RIVKETYTGINGTK-SLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDH 84
Query: 460 DFNGIYAIPNIR-------GGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQSS 512
P I G + + + + A
Sbjct: 85 AIMNGELEPLIVVTPTFNGGNCTAQNFYQEFRQNVIPFVESKYSTYAESTTPQGIAASRM 144
Query: 513 RLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGR--------WLIVHTMKDC 564
G + GGL T + D + G+ + + + +
Sbjct: 145 HRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNSPQDKANSIAEAINRSGLSKR 204
Query: 565 KNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYG 615
+ +F + I + ++ + + F+K +
Sbjct: 205 EYFVFAATGSEDIAYANMNPQIEAMKALPHFDYTSDFSKGNFYFLVAPGAT 255
>d1lnsa3 c.69.1.21 (A:146-550) X-Prolyl dipeptidyl aminopeptidase
PepX, middle domain {Lactococcus lactis [TaxId: 1358]}
Length = 405
Score = 38.4 bits (88), Expect = 0.004
Identities = 25/226 (11%), Positives = 45/226 (19%), Gaps = 36/226 (15%)
Query: 464 IYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQ------------- 510
G G ++L
Sbjct: 138 ASIYVAGVGTRSSDGFQTSGDY-----QQIYSMTAVIDWLNGRARAYTSRKKTHEIKASW 192
Query: 511 -SSRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMF 569
+ ++A+ G S G + + + + G IS + F
Sbjct: 193 ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAG---ISSWYNYYR-ENGLVRSPGGF 248
Query: 570 HFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGY 629
DLD + L + + K YL
Sbjct: 249 PGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYL--- 305
Query: 630 SPLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEK 675
++ L++ D V+P + F L E
Sbjct: 306 INTDKVKAD----------VLIVHGLQDWNVTPEQAYNFWKALPEG 341
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 37.7 bits (87), Expect = 0.005
Identities = 23/192 (11%), Positives = 43/192 (22%), Gaps = 64/192 (33%)
Query: 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAI-VQVGNPEISDCGRWLIVHTMKDCKNNMFH 570
+ +++ G ++GG + A D+F V G P +
Sbjct: 11 NSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP----------------------Y 48
Query: 571 FCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFTIGYFWESDYGSPANSSQFEYLLGYS 630
C + + Y +P + + +
Sbjct: 49 DCARNQYY-------------------------TSCMYNGYPSITTPTANMKSWSGNQIA 83
Query: 631 PLHNIQGPDELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRI 690
+ N+ + T D V P + A L +
Sbjct: 84 SVANLGQ---------RKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSAN-------VSY 127
Query: 691 ETKAGHGGGKPT 702
T G PT
Sbjct: 128 VTTTGAVHTFPT 139
Score = 29.6 bits (66), Expect = 1.9
Identities = 10/65 (15%), Positives = 14/65 (21%), Gaps = 7/65 (10%)
Query: 807 PNELKGKQYPATLLMTADHDDRVSPVHSLKFAATLQEKLRDYPHQTNPLLIRIETKAGHG 866
+ + T D V P + A L + T G
Sbjct: 82 IASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSAN-------VSYVTTTGAV 134
Query: 867 GGKPT 871
PT
Sbjct: 135 HTFPT 139
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 34.0 bits (76), Expect = 0.066
Identities = 24/234 (10%), Positives = 61/234 (26%), Gaps = 23/234 (9%)
Query: 108 YSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSED 167
+P GD F L + D G R + + V + F D
Sbjct: 5 LLNPDIHGDRIIFVCCDDL------WEHDLKSGSTR------KIVSNLGVI-NNARFFPD 51
Query: 168 GKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVL--------HRLKFVSIAWTHDHKGVFY 219
G+ +A + S T+ + E + R+ + D +
Sbjct: 52 GRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 111
Query: 220 SNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNKDAPNYRLITIDF 279
++ S + + + + + +G + + + + P+++
Sbjct: 112 TDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGT 171
Query: 280 DNFAESNWKTLIEENKDD--VLDWATCVANDKLILSYIHHVKNVMHLHDLASGK 331
+ + D + + ++ ++ DL
Sbjct: 172 RGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKD 225
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 33.6 bits (75), Expect = 0.100
Identities = 13/160 (8%), Positives = 31/160 (19%), Gaps = 11/160 (6%)
Query: 429 DGNNPCILY--GYGGFAVSLQPGFSVTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRL 486
+ +L G G + + + + + GE
Sbjct: 21 EAPKALLLALHGLQGSKEHILA-----LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSP 75
Query: 487 LNKQNVFDDFQCAAEYLIAS----GYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAIV 542
+ V+ E L + GGS G + + + G
Sbjct: 76 RYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAF 135
Query: 543 QVGNPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKI 582
+ ++ + +
Sbjct: 136 IGSGFPMKLPQGQVVEDPGVLALYQAPPATRGEAYGGVPL 175
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 32.8 bits (73), Expect = 0.20
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 10/122 (8%)
Query: 105 YPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSF 164
K S + DH + + + + + + ++ G + VFL+ + + G S+ YS
Sbjct: 16 RLKLYSLRWISDHEYLY-----KQENNILVFNAEYGNSSVFLENSTFDEFGH-SINDYSI 69
Query: 165 SEDGKTLAYCLSSSG----SDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYS 220
S DG+ + + S S D+ + E + W+ + Y
Sbjct: 70 SPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV 129
Query: 221 NQ 222
Sbjct: 130 WN 131
>d3c8da2 c.69.1.2 (A:151-396) Enterochelin esterase, catalytic
domain {Shigella flexneri 2a str. 2457T [TaxId: 198215]}
Length = 246
Score = 31.8 bits (71), Expect = 0.30
Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 6/179 (3%)
Query: 392 KVPDFDPSLFETKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFS 451
+ P+ + + ++I + P + G F P +
Sbjct: 9 QAPEIPAKEII----WKSERLKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSMPVWP 63
Query: 452 VTKIVFLRDFNGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511
V A+ + + R H+ + +IA ++
Sbjct: 64 VLT-SLTHRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKVIAPFSDRA 122
Query: 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLIVHTMKDCKNNMFH 570
R + G S GGL P+ FG + Q G+ G ++ K
Sbjct: 123 DRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVS 181
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 31.8 bits (70), Expect = 0.38
Identities = 23/242 (9%), Positives = 48/242 (19%), Gaps = 17/242 (7%)
Query: 133 YIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVAT 192
+IQD + + + D K + + D T
Sbjct: 27 FIQDVSGTYVL------KVPEPLRIR--YVRRGGDTKVAFI---HGTREGDFLGIYDYRT 75
Query: 193 GKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKHSKKN-RSSAYHLTVNVAPITS 251
GK + ++ + K +N + + + T
Sbjct: 76 GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 135
Query: 252 QYITNEGPQFVFKTNKDAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLI 311
+ + + Y + I + EN D + +
Sbjct: 136 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 195
Query: 312 LSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHC 371
LSY D + I G +
Sbjct: 196 LSYRSLDP----SPDRVVLNFSFEVVSKPFVIPLIPG-SPNPTKLVPRSMTSEAGEYDLN 250
Query: 372 NI 373
++
Sbjct: 251 DM 252
Score = 29.8 bits (65), Expect = 1.6
Identities = 10/94 (10%), Positives = 21/94 (22%), Gaps = 5/94 (5%)
Query: 102 MWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGS 161
D Y + + Y G + + +L
Sbjct: 260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTD 319
Query: 162 YSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE 195
S D KT+ D ++ + ++
Sbjct: 320 LRLSADRKTVM-----VRKDDGKIYTFPLEKPED 348
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM
domains {Pig (Sus scrofa) [TaxId: 9823]}
Length = 231
Score = 30.7 bits (68), Expect = 0.79
Identities = 23/169 (13%), Positives = 44/169 (26%), Gaps = 8/169 (4%)
Query: 69 EETKKFVDEENA-ISRPYLEDHPDRDKVKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQ 127
+KF EE ++ Y + ++ + G + +
Sbjct: 15 ATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWELGLMNTHIPESFGGLGLGIIDSCLIT 74
Query: 128 NHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYSFS---EDGKTLAYCLS--SSGSDW 182
L L G E+ AYC++ +GSD
Sbjct: 75 EELAYGCTGVQTAIEANTLGQVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDV 134
Query: 183 TSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHKGVFYSNQEPKSKSKKH 231
+ K G EY +++ K + + +P K+
Sbjct: 135 AGIKTKAEKKGDEY--IINGQKMWITNGGKANWYFLLARSDPDPKAPAS 181
>d2ga1a1 a.4.1.16 (A:1-102) Hypothetical protein Ava_0674 (Alr1493
orthologue) {Anabaena variabilis [TaxId: 1172]}
Length = 102
Score = 29.0 bits (65), Expect = 0.79
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Query: 666 LKFAATLQEKLRDYPHQTNPLLI-RIETKAGHGGGKPTTKQFPLTIPVIYFYLTSGP--- 721
L+ A L E+L D +L I+ G GG+ + + + + Y G
Sbjct: 8 LEVIAALPEELVDQALNYVQMLQNPIQITPGVCGGQARIRNTRIPVWTLVAYRQQGAPDK 67
Query: 722 -VLQRYPE 728
+L YP
Sbjct: 68 ELLANYPG 75
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 31.0 bits (68), Expect = 0.79
Identities = 8/121 (6%), Positives = 28/121 (23%), Gaps = 12/121 (9%)
Query: 89 HPDRDKVKAELTKMWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDP 148
D +K + + + + + + ++ DG + +
Sbjct: 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW-NL 280
Query: 149 NN------LSDDGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHR 202
+ S + L ++ D + T + ++
Sbjct: 281 QTRKKIKNFAKFNEDS--VVKIACSDNILC---LATSDDTFKTNAAIDQTIELNASSIYI 335
Query: 203 L 203
+
Sbjct: 336 I 336
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 30.5 bits (67), Expect = 0.90
Identities = 9/55 (16%), Positives = 15/55 (27%), Gaps = 5/55 (9%)
Query: 161 SYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHK 215
S F+ GK S ++ G + +S + D K
Sbjct: 270 SLKFAYCGKWFV-----STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDK 319
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 30.2 bits (66), Expect = 1.2
Identities = 22/278 (7%), Positives = 59/278 (21%), Gaps = 29/278 (10%)
Query: 154 DGTVSLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE------YPEVLHRLKFVS 207
D + + G+ ++ + S+ D+ TG+
Sbjct: 31 DAGPTPMVPMVAPGGRIAY----ATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86
Query: 208 IAWTHDHKGVFYSNQEPKSKSKKHSKKNRSSAYHLTVNVAPITSQYITNEGPQFVFKTNK 267
A + D K + + + + A + ++ + + +
Sbjct: 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAW---- 142
Query: 268 DAPNYRLITIDFDNFAESNWKTLIEENKDDVLDWATCVANDKLILSYIHHVKNVMHLHDL 327
A + + + + + + W H
Sbjct: 143 -ARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET-----YAQPDVLAVWNQHESSG 196
Query: 328 ASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMSFLQPTIIFHCNIPARVDPNSKLETSI 387
YT D+ + + + + N +
Sbjct: 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAF 256
Query: 388 FREIKVPDFDPSLFETKQVFYP---------SKDGTKI 416
+ FD + + S DG+ +
Sbjct: 257 GAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTV 294
>d1dina_ c.69.1.9 (A:) Dienelactone hydrolase {Pseudomonas sp., B13
[TaxId: 306]}
Length = 233
Score = 29.6 bits (65), Expect = 1.7
Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 21/196 (10%)
Query: 403 TKQVFYPSKDGTKIPMFILSRKGAQLDGNNPCILYGYGGFAVSLQPGFSVTKIVFLRDFN 462
T+ + S DG + S P I+ F V+ F + +L D
Sbjct: 3 TEGISIQSYDGHTFGALVGSPAK----APAPVIVIAQEIFGVN---AFMRETVSWLVDQG 55
Query: 463 GIYAIPNIRGGGEYG-----------ERWHDGGRLLNKQNVFDDFQCAAEYLIASGYTQS 511
P++ G E+ + + + + D + A Y Y+ +
Sbjct: 56 YAAVCPDLYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYS-N 114
Query: 512 SRLAIQGGSNGGLLTAACINQRPDLFGAAIVQVGNPEISDCGRWLI--VHTMKDCKNNMF 569
++ + G GG L + VG + + + +++
Sbjct: 115 GKVGLVGYCLGGALAFLVAAKGYVDRAVGYYGVGLEKQLNKVPEVKHPALFHMGGQDHFV 174
Query: 570 HFCDLDTIPDRKIEGK 585
I +
Sbjct: 175 PAPSRQLITEGFGANP 190
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 29.4 bits (64), Expect = 2.1
Identities = 12/148 (8%), Positives = 31/148 (20%), Gaps = 15/148 (10%)
Query: 52 HGVKIPDPYGWMEDPDSEETKKFVDEENAISRPYLEDHPDRDKVKAELTKMWDYPKYSSP 111
H + + + + + +
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258
Query: 112 QRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSY----SFSED 167
+ + + V D +G + S+D
Sbjct: 259 ALDRIYLLVDQRD-------EWRHKTASRFVVVL-DAKTGERLAKFEMGHEIDSINVSQD 310
Query: 168 GKTLAYCLSSSGSDWTSMHFKDVATGKE 195
K L Y + + +++ D +G+E
Sbjct: 311 EKPLLY---ALSTGDKTLYIHDAESGEE 335
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 29.2 bits (64), Expect = 2.7
Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 7/54 (12%)
Query: 146 LDPNNLSDDGTVSLGSY----SFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKE 195
+ + G +S G ++DG + Y +S+G++ + D A+ ++
Sbjct: 299 VTASVGQTSGPISNGHDSDAIIAAQDGASDNY-ANSAGTE--VLDIYDAASDQD 349
>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH
{Sheep (Ovis aries) [TaxId: 9940]}
Length = 494
Score = 28.8 bits (64), Expect = 3.6
Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 14/146 (9%)
Query: 546 NPEISDCGRWLIVHTMKDCKNNMFHFCDLDTIPDRKIEGKLPLTQVVHKVLDMLKFNKFT 605
+P I L + +H R + + V + ++ K
Sbjct: 267 SPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLG 326
Query: 606 IGYFWESDYGSPANSSQFEYLLGY--------SPLHNIQGPDELKGKQYPATLLMTADHD 657
G + Q+E +L + L GP KG T+ D
Sbjct: 327 NPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDD 386
Query: 658 DRV------SPVHSLKFAATLQEKLR 677
R+ PV + +L + ++
Sbjct: 387 MRIAKEEIFGPVQQIMKFKSLDDVIK 412
>d1a6ca1 b.121.4.2 (A:1-176) Nepovirus capsid protein {TRSV (Tobacco
ringspot virus) [TaxId: 12282]}
Length = 176
Score = 27.8 bits (62), Expect = 5.1
Identities = 10/81 (12%), Positives = 18/81 (22%), Gaps = 18/81 (22%)
Query: 302 ATCVANDKLILSYIHHVKNVMHLHDLASGKHLYTFPLDVGTIVGFSGKKKYSEIFYSFMS 361
+ V L D + + + G + G +
Sbjct: 89 LGNECPPSEMFELPTKV---FMLKDADV----HEWQFNYGELTGHG-------LCNWANV 134
Query: 362 FLQPTIIFHC----NIPARVD 378
QPT+ F + D
Sbjct: 135 ATQPTLYFFVASTNQVTMAAD 155
>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal
xylanase z {Clostridium thermocellum [TaxId: 1515]}
Length = 255
Score = 28.1 bits (61), Expect = 5.3
Identities = 25/163 (15%), Positives = 40/163 (24%), Gaps = 14/163 (8%)
Query: 393 VPDFDPSLFETKQ-----------VFYPSKDGTKIPMFILSRKGAQLDGNNPCI--LYGY 439
+P PS ++ + ++ + + P + G D + L+G
Sbjct: 2 LPTMPPSGYDQVRNGVPRGQVVNISYFSTATNSTRPARVYLPPGYSKDKKYSVLYLLHGI 61
Query: 440 GGFAVSLQPGFSVTKIVFLRDF-NGIYAIPNIRGGGEYGERWHDGGRLLNKQNVFDDFQC 498
GG G ++ G I N +
Sbjct: 62 GGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPGIADGYENFTKDLLNSLI 121
Query: 499 AAEYLIASGYTQSSRLAIQGGSNGGLLTAACINQRPDLFGAAI 541
S YT AI G S GG + D F
Sbjct: 122 PYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIG 164
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 27.9 bits (60), Expect = 7.6
Identities = 18/110 (16%), Positives = 34/110 (30%), Gaps = 7/110 (6%)
Query: 100 TKMWDYPKYSSPQRQGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTV-- 157
++ Y + G + + + +LD +A + ++
Sbjct: 266 PVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHK 325
Query: 158 -SLGSYSFSEDGKTLAYCLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFV 206
S+ S GK ++G D M DV + + L LK V
Sbjct: 326 NSVSQISVLSGGKAKCSQFCTTGMDGG-MSIWDVRSLE---SALKDLKIV 371
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 27.6 bits (60), Expect = 7.9
Identities = 9/119 (7%), Positives = 25/119 (21%), Gaps = 16/119 (13%)
Query: 105 YPKYSSPQR-QGDHYFFFHNTGLQNHSVMYIQDSLDGEARVFLDPNNLSDDGTVSLGSYS 163
+ + + G + + + + V ++ + + Y
Sbjct: 16 KIHDPEAKWISDTEFIYREQKG-----TVRLWNVETNTSTVLIEGKKIES---LRAIRYE 67
Query: 164 FSEDGKTLAY-------CLSSSGSDWTSMHFKDVATGKEYPEVLHRLKFVSIAWTHDHK 215
S D + + S + P + K W +
Sbjct: 68 ISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ 126
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.417
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,907,218
Number of extensions: 191310
Number of successful extensions: 450
Number of sequences better than 10.0: 1
Number of HSP's gapped: 447
Number of HSP's successfully gapped: 53
Length of query: 1012
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 918
Effective length of database: 1,116,976
Effective search space: 1025383968
Effective search space used: 1025383968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.8 bits)