RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12886
(326 letters)
>d2h7ca1 c.69.1.1 (A:1021-1553) Mammalian carboxylesterase (liver
carboxylesterase I) {Human (Homo sapiens) [TaxId: 9606]}
Length = 532
Score = 87.1 bits (214), Expect = 1e-19
Identities = 69/245 (28%), Positives = 106/245 (43%), Gaps = 25/245 (10%)
Query: 66 NVPVFIHGASN------LFPGHMMAGFYEVVVVTINYRLGALGFLSTGDHNSPGNYGILD 119
V V+IHG + G +A VVVVTI YRLG GF STGD +S GN+G LD
Sbjct: 114 PVMVWIHGGGLMVGAASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGHLD 173
Query: 120 QAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSIAYF 179
Q AL+W+ NI F G+P S+T+FG AG S +L+++P +NL R I++
Sbjct: 174 QVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG----- 228
Query: 180 QSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSLELGNANFRPQ 239
A +++ + V+ + A GC +S +V CL++ L
Sbjct: 229 -----VALTSVLVKKGDVKPLAEQIAITAGCKTTTSAVMVHCLRQKTEEELLETTLKMKF 283
Query: 240 VGMFAWGPVLDLNFTVPADHWHDGWYQKDWYFTNYTTEEYIRMGSFSRDLAYMTGVTTQE 299
+ + G + + DG + + YM G+ QE
Sbjct: 284 LSLDLQGDPRESQPLLG--TVIDGMLLLKTPEELQAERNFHTV-------PYMVGINKQE 334
Query: 300 AAYIV 304
+++
Sbjct: 335 FGWLI 339
>d1dx4a_ c.69.1.1 (A:) Acetylcholinesterase {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 571
Score = 85.6 bits (210), Expect = 4e-19
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 67 VPVFIHG--------ASNLFPGHMMAGFYEVVVVTINYRLGALGFL-------STGDHNS 111
+ ++I+G +++ +MA V+V + YR+GA GFL S +
Sbjct: 141 ILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEA 200
Query: 112 PGNYGILDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIA 171
PGN G+ DQA+A++W+ N F G+P +TLFG AG++S +++P TR LV+R +
Sbjct: 201 PGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMM 260
Query: 172 QLWSIAYFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFE----SSWKIVDCLKR-GR 226
Q + A W+ + V+ + C+ + ++ C++
Sbjct: 261 QSG--------TMNAPWSHMTSEKAVEIG-KALINDCNCNASMLKTNPAHVMSCMRSVDA 311
Query: 227 SSLELGNANFRPQVGMFAWGPVLDLNFTV--PADHWHDGWYQKDWYFTNYTTEE 278
++ + N + F P +D F P + +E
Sbjct: 312 KTISVQQWNSYSGILSFPSAPTIDGAFLPADPMTLMKTADLKDYDILMGNVRDE 365
>d1ea5a_ c.69.1.1 (A:) Acetylcholinesterase {Pacific electric ray
(Torpedo californica) [TaxId: 7787]}
Length = 532
Score = 76.3 bits (186), Expect = 4e-16
Identities = 69/237 (29%), Positives = 117/237 (49%), Gaps = 25/237 (10%)
Query: 67 VPVFIH--------GASNLFPGHMMAGFYEVVVVTINYRLGALGFLSTGDH-NSPGNYGI 117
V V+I+ +++ G +A EVV+V+++YR+GA GFL+ +PGN G+
Sbjct: 108 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167
Query: 118 LDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSIA 177
LDQ MALQW+H NI+ F GDP ++T+FG AG AS G+ +++P +R+L RR I Q S
Sbjct: 168 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPN 227
Query: 178 YFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSLELGNANFR 237
+ + A+ + + ++L C+ S +++ CL R + EL + +
Sbjct: 228 CPWASVSVAEG---------RRRAVELGRNLNCNLNSDEELIHCL-REKKPQELIDVEWN 277
Query: 238 PQ----VGMFAWGPVLDLNF--TVPADHWHDGWYQKDWYFTNYTTEEYIRMGSFSRD 288
+ F++ PV+D F T + G ++K +E +
Sbjct: 278 VLPFDSIFRFSFVPVIDGEFFPTSLESMLNSGNFKKTQILLGVNKDEGSFFLLYGAP 334
>d2bcea_ c.69.1.1 (A:) Bile-salt activated lipase (cholesterol
esterase) {Cow (Bos taurus) [TaxId: 9913]}
Length = 579
Score = 75.8 bits (185), Expect = 8e-16
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 33/260 (12%)
Query: 67 VPVFIHG--------------ASNLFPGHMMAGFYEVVVVTINYRLGALGFLSTGDHNSP 112
V ++I+G ++ L+ G +A V+VVT NYR+G LGFLSTGD N P
Sbjct: 100 VMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLP 159
Query: 113 GNYGILDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQ 172
GNYG+ DQ MA+ W+ NIE F GDP+ ITLFG AG AS L ++P + L++R I
Sbjct: 160 GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAI-- 217
Query: 173 LWSIAYFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKR------GR 226
QSG WA+ QD ++ A+ +GC + + K+ CLK
Sbjct: 218 ------SQSGVGLCPWAIQQDP---LFWAKRIAEKVGCPVDDTSKMAGCLKITDPRALTL 268
Query: 227 SSLELGNANFRPQVGMFAWGPVLDLNFTV--PADHWHDGWYQKDWYFTNYTTEEYIRMGS 284
+ + P++ ++ PV+D +F P + + + TN
Sbjct: 269 AYKLPLGSTEYPKLHYLSFVPVIDGDFIPDDPVNLYANAADVDYIAGTNDMDGHLFVGMD 328
Query: 285 FSRDLAYMTGVTTQEAAYIV 304
+ VT ++ +V
Sbjct: 329 VPAINSNKQDVTEEDFYKLV 348
>d2ha2a1 c.69.1.1 (A:1-542) Acetylcholinesterase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 542
Score = 75.5 bits (184), Expect = 1e-15
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 67 VPVFIH--------GASNLFPGHMMAGFYEVVVVTINYRLGALGFLST-GDHNSPGNYGI 117
V ++I+ + +++ G +A V+V++NYR+G GFL+ G +PGN G+
Sbjct: 114 VLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSREAPGNVGL 173
Query: 118 LDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSIA 177
LDQ +ALQW+ NI F GDP S+TLFG AGAAS G+ +++ +R+L R + Q
Sbjct: 174 LDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQ----- 228
Query: 178 YFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSLELGNANFR 237
A + + R R +RL G + + +++ CL R R + +L + +
Sbjct: 229 SGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACL-RTRPAQDLVDHEWH 287
Query: 238 ----PQVGMFAWGPVLDLNFT--VPADHWHDGWYQKDWYFTNYTTEEYIRMGSFS 286
+ F++ PV+D +F P + G +Q +E +
Sbjct: 288 VLPQESIFRFSFVPVVDGDFLSDTPEALINTGDFQDLQVLVGVVKDEGSYFLVYG 342
>d1p0ia_ c.69.1.1 (A:) Butyryl cholinesterase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 526
Score = 74.0 bits (180), Expect = 3e-15
Identities = 75/226 (33%), Positives = 116/226 (51%), Gaps = 23/226 (10%)
Query: 67 VPVFIH--------GASNLFPGHMMAGFYEVVVVTINYRLGALGFLST-GDHNSPGNYGI 117
V ++I+ + +++ G +A V+VV++NYR+GALGFL+ G+ +PGN G+
Sbjct: 106 VLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALPGNPEAPGNMGL 165
Query: 118 LDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSIA 177
DQ +ALQW+ NI F G+P S+TLFG AGAAS L +++P + +L R A
Sbjct: 166 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTR--------A 217
Query: 178 YFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSLELGNANFR 237
QSGS A WA + + +N + A+ GCS E+ +I+ CL+ L N F
Sbjct: 218 ILQSGSFNAPWA-VTSLYEARNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFV 276
Query: 238 PQVG---MFAWGPVLDLNF--TVPADHWHDGWYQKDWYFTNYTTEE 278
G +GP +D +F +P G ++K +E
Sbjct: 277 VPYGTPLSVNFGPTVDGDFLTDMPDILLELGQFKKTQILVGVNKDE 322
>d1llfa_ c.69.1.17 (A:) Type-B carboxylesterase/lipase {Candida
cylindracea, cholesterol esterase [TaxId: 44322]}
Length = 534
Score = 64.8 bits (156), Expect = 3e-12
Identities = 50/247 (20%), Positives = 83/247 (33%), Gaps = 28/247 (11%)
Query: 67 VPVFIHG------ASNLFPGHMMAGFY-----EVVVVTINYRLGALGFLSTGD--HNSPG 113
V ++I G + +FP M ++ V +NYR+ + GFL+ D G
Sbjct: 116 VMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGSG 175
Query: 114 NYGILDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQL 173
N G+ DQ + +QW+ NI F GDP+ +T+FG AG+ S ++ N L
Sbjct: 176 NAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDN--TYKGKPL 233
Query: 174 WSIAYFQSGSATADWALIQDRWRVQNTSRLFAQHLGCS--------FESSWKIVDCLKRG 225
+ QSG+ + + + G + SS ++D
Sbjct: 234 FRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATNNT 293
Query: 226 RSSLELGNANFRPQVGMFAWGPVLDLNFTVPADHWHDGWYQKDWYFTNYTTEEYIRMGSF 285
L + + P DG Y +E G
Sbjct: 294 PGFLAYSSLRL-----SYLPRPDGKNITDDMYKLVRDGKYASVPVIIGDQNDEGTIFGLS 348
Query: 286 SRDLAYM 292
S ++
Sbjct: 349 SLNVTTN 355
>d1ukca_ c.69.1.17 (A:) Esterase EstA {Aspergillus niger [TaxId:
5061]}
Length = 517
Score = 61.3 bits (147), Expect = 5e-11
Identities = 54/222 (24%), Positives = 84/222 (37%), Gaps = 13/222 (5%)
Query: 67 VPVFIHG--------ASNLFPGHMMAGFYEVVVVTINYRLGALGFLSTGDHNSPG--NYG 116
V +FI G A+ + A +V VT NYR+GALGFL++ G N G
Sbjct: 99 VWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNAG 158
Query: 117 ILDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSI 176
+LDQ AL+W+ IE F GDP+ I + G AGA S + ++ + A + S
Sbjct: 159 LLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESS 218
Query: 177 AYFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSLELGNANF 236
++ + ++ +R+ L C E K S G ++
Sbjct: 219 -FWPTQRTVSEMEFQFERFVNDTGCSSARDSLECLREQDIA--TIQKGNTGSPFPGGSSS 275
Query: 237 RPQVGMFAWGPVLDLNFTVPADHWHDGWYQKDWYFTNYTTEE 278
F L + + G + K T+E
Sbjct: 276 PLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVPVLVGDDTDE 317
>d1qe3a_ c.69.1.1 (A:) Thermophilic para-nitrobenzyl esterase (PNB
esterase) {Bacillus subtilis [TaxId: 1423]}
Length = 483
Score = 57.4 bits (137), Expect = 7e-10
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 26/239 (10%)
Query: 67 VPVFIHGASNLFPGHMMAGFY--------EVVVVTINYRLGALGFLS--TGDHNSPGNYG 116
V V+IHG + + EV+VVT+NYRLG GFL + D N G
Sbjct: 98 VMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLG 157
Query: 117 ILDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRVIAQLWSI 176
+LDQA AL+W+ NI F GDP+++T+FG AG S L+ P + L+
Sbjct: 158 LLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKG--------LFQK 209
Query: 177 AYFQSGSATADWALIQDRWRVQNTSRLFAQHLGCSFESSWKI--VDCLKRGRSSLELGNA 234
A +SG++ + + +T+ F Q LG + ++ V +++ +L A
Sbjct: 210 AIMESGASRTMT-----KEQAASTAAAFLQVLGINESQLDRLHTVAAEDLLKAADQLRIA 264
Query: 235 NFRPQVGMFAWGPVLDLNFTVPADH-WHDGWYQKDWYFTNYTTEEYIRMGSFSRDLAYM 292
+F + + +G T +E + D+
Sbjct: 265 EKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQ 323
>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium
thermocellum [TaxId: 1515]}
Length = 71
Score = 25.8 bits (57), Expect = 1.6
Identities = 9/47 (19%), Positives = 14/47 (29%), Gaps = 2/47 (4%)
Query: 90 VVVTINYRLGALGF--LSTGDHNSPGNYGILDQAMALQWIHGNIEHF 134
V Y L + D N G D + ++I I+
Sbjct: 20 AVALKRYVLRSGISINTDNADLNEDGRVNSTDLGILKRYILKEIDTL 66
>d2czvc1 d.58.59.1 (C:3-120) RNase P protein component 2, Rnp2
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 118
Score = 25.8 bits (57), Expect = 3.7
Identities = 7/52 (13%), Positives = 15/52 (28%), Gaps = 8/52 (15%)
Query: 118 LDQAMALQWIHGNIEHFNGDPNSITLFGPGAGAASAGLLMVNPRTRNLVRRV 169
+ + I + G+ G L+ +P T+ + R
Sbjct: 27 FTKDEVKELIWKSSLEVLGET--------GTAIVKPWLIKFDPNTKTGIVRS 70
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 26.2 bits (57), Expect = 5.1
Identities = 9/28 (32%), Positives = 11/28 (39%)
Query: 6 VGFPIPRSCGQHSQTSGREERSCIHVRD 33
V +PR HS R E VR+
Sbjct: 167 VYITVPRIYRHHSYDRARIEAVIFGVRN 194
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia
blattae [TaxId: 563]}
Length = 224
Score = 25.5 bits (55), Expect = 8.8
Identities = 16/145 (11%), Positives = 37/145 (25%), Gaps = 29/145 (20%)
Query: 35 HNCGSISTAQMLSDFLYRAP--VDNIVKLLVEKNVPVFIHGASNLFP-GHMMAGFYEVVV 91
+ G ++T ++ P + + + +P GH G+ +V
Sbjct: 98 EDAGDLATRSAKDHYMRIRPFAFYGVSTCNTTEQDK---LSKNGSYPSGHTSIGWATALV 154
Query: 92 VTINYRLGALGFLSTGDHNSPGNYGILDQAMALQWIHGNIE---HFNGDPNSITLFGPGA 148
+ + + H+ D
Sbjct: 155 LAEINP----------------QRQNEILKRGYELGQSRVICGYHWQSD----VDAARVV 194
Query: 149 GAASAGLLMVNPRTRNLVRRVIAQL 173
G+A L NP + +++ A+
Sbjct: 195 GSAVVATLHTNPAFQQQLQKAKAEF 219
>d1zsqa2 c.45.1.3 (A:199-585) Myotubularin-related protein 2,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 387
Score = 25.7 bits (56), Expect = 9.5
Identities = 7/38 (18%), Positives = 18/38 (47%)
Query: 192 QDRWRVQNTSRLFAQHLGCSFESSWKIVDCLKRGRSSL 229
+ W S + +H+ + +I D ++ G++S+
Sbjct: 178 ETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSV 215
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.430
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,287,360
Number of extensions: 60107
Number of successful extensions: 171
Number of sequences better than 10.0: 1
Number of HSP's gapped: 168
Number of HSP's successfully gapped: 33
Length of query: 326
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 240
Effective length of database: 1,226,816
Effective search space: 294435840
Effective search space used: 294435840
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.9 bits)