Query psy12892
Match_columns 315
No_of_seqs 207 out of 2516
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 22:27:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 2.5E-49 8.6E-54 341.2 21.7 304 2-314 30-361 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.7E-48 5.7E-53 336.0 21.5 283 1-314 95-394 (437)
3 1wdy_A 2-5A-dependent ribonucl 100.0 6.7E-48 2.3E-52 313.7 19.5 246 18-315 3-271 (285)
4 4g8k_A 2-5A-dependent ribonucl 100.0 5.2E-47 1.8E-51 315.8 19.4 267 16-315 21-319 (337)
5 2xai_A ASB-9, ankyrin repeat a 100.0 6.6E-46 2.3E-50 298.0 22.5 240 19-313 2-254 (261)
6 1wdy_A 2-5A-dependent ribonucl 100.0 2.9E-45 1E-49 298.1 25.3 243 2-295 21-284 (285)
7 3ljn_A Hypothetical protein; a 100.0 1.7E-46 5.9E-51 315.9 16.0 252 8-313 8-305 (364)
8 3d9h_A CDNA FLJ77766, highly s 100.0 1.2E-45 4E-50 300.1 18.8 242 17-314 12-270 (285)
9 1oy3_D Transcription factor in 100.0 1.5E-45 5.1E-50 299.5 18.2 248 13-311 2-272 (282)
10 3utm_A Tankyrase-1; tankyrase, 100.0 9.3E-45 3.2E-49 303.9 22.4 245 10-306 48-322 (351)
11 2fo1_E LIN-12 protein; beta-ba 100.0 2.2E-46 7.5E-51 315.7 9.5 249 13-315 87-364 (373)
12 3d9h_A CDNA FLJ77766, highly s 100.0 3.1E-43 1.1E-47 285.8 24.7 226 12-292 51-282 (285)
13 1yyh_A HN1;, notch 1, ankyrin 100.0 3.2E-44 1.1E-48 286.9 18.5 225 12-288 2-247 (253)
14 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-43 6.4E-48 280.6 22.0 224 13-288 2-240 (241)
15 3utm_A Tankyrase-1; tankyrase, 100.0 3.3E-44 1.1E-48 300.6 17.0 253 11-315 15-298 (351)
16 3b7b_A Euchromatic histone-lys 100.0 1.3E-42 4.3E-47 275.1 25.1 222 12-285 3-231 (237)
17 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-44 4E-49 289.4 12.0 221 45-315 2-241 (253)
18 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-42 4.6E-47 289.2 24.4 245 1-293 40-330 (337)
19 1k1a_A B-cell lymphoma 3-encod 100.0 5.9E-43 2E-47 277.7 19.0 217 47-315 3-234 (241)
20 3b7b_A Euchromatic histone-lys 100.0 1E-42 3.5E-47 275.7 20.0 218 44-312 2-225 (237)
21 1s70_B 130 kDa myosin-binding 100.0 1.1E-43 3.8E-48 290.9 13.1 238 16-312 36-280 (299)
22 3aji_A 26S proteasome non-ATPa 100.0 7.1E-42 2.4E-46 269.7 22.5 222 17-290 3-231 (231)
23 2fo1_E LIN-12 protein; beta-ba 100.0 5.1E-43 1.8E-47 295.1 16.2 227 11-289 115-371 (373)
24 3eu9_A Huntingtin-interacting 100.0 9.3E-42 3.2E-46 270.6 21.0 229 13-292 2-238 (240)
25 3kea_A K1L; tropism, ANK repea 100.0 2.9E-42 1E-46 279.9 17.6 243 3-312 17-267 (285)
26 4b93_B Ankyrin repeat domain-c 100.0 2.2E-42 7.6E-47 277.7 16.0 226 14-291 5-246 (269)
27 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-41 5.6E-46 272.4 17.9 204 52-309 2-211 (261)
28 2dzn_A Probable 26S proteasome 100.0 2.4E-40 8.2E-45 260.5 23.7 216 20-286 2-227 (228)
29 4b93_B Ankyrin repeat domain-c 100.0 7.6E-42 2.6E-46 274.5 12.8 223 48-314 6-236 (269)
30 3aji_A 26S proteasome non-ATPa 100.0 5.9E-41 2E-45 264.5 17.0 214 50-315 3-223 (231)
31 3kea_A K1L; tropism, ANK repea 100.0 2E-41 7E-46 275.0 14.2 225 29-315 8-239 (285)
32 2dzn_A Probable 26S proteasome 100.0 3.1E-40 1E-44 259.9 18.8 209 53-313 2-224 (228)
33 3ljn_A Hypothetical protein; a 100.0 2.8E-40 9.6E-45 278.1 19.2 265 2-292 36-317 (364)
34 2f8y_A Notch homolog 1, transl 100.0 4.5E-39 1.5E-43 252.4 23.3 207 1-231 6-219 (223)
35 1sw6_A Regulatory protein SWI6 100.0 1.6E-41 5.4E-46 280.9 6.9 242 2-308 35-327 (327)
36 2f8y_A Notch homolog 1, transl 100.0 1.2E-39 3.9E-44 255.7 17.1 209 31-291 2-218 (223)
37 1ikn_D Protein (I-kappa-B-alph 100.0 6.2E-40 2.1E-44 259.4 13.1 218 14-309 2-231 (236)
38 3eu9_A Huntingtin-interacting 100.0 1.2E-39 4E-44 258.5 14.4 219 46-315 2-228 (240)
39 1oy3_D Transcription factor in 100.0 1.1E-38 3.9E-43 258.9 11.6 219 46-315 2-243 (282)
40 2rfa_A Transient receptor pote 100.0 5.9E-37 2E-41 241.7 20.5 194 19-231 2-225 (232)
41 2etb_A Transient receptor pote 100.0 2.7E-37 9.3E-42 247.3 13.6 214 19-292 1-249 (256)
42 3hra_A Ankyrin repeat family p 100.0 1.8E-35 6.3E-40 228.0 22.7 187 17-226 2-201 (201)
43 4gpm_A Engineered protein OR26 100.0 1.3E-35 4.6E-40 220.8 19.3 154 22-198 6-159 (169)
44 2pnn_A Transient receptor pote 100.0 4.4E-37 1.5E-41 248.4 12.1 237 12-301 5-271 (273)
45 2rfa_A Transient receptor pote 100.0 1.2E-35 4.3E-40 234.1 18.0 197 52-294 2-227 (232)
46 3hra_A Ankyrin repeat family p 100.0 5E-35 1.7E-39 225.5 19.2 187 50-287 2-201 (201)
47 1s70_B 130 kDa myosin-binding 100.0 1.5E-36 5.2E-41 248.5 9.7 238 26-315 4-250 (299)
48 1ikn_D Protein (I-kappa-B-alph 100.0 1.3E-36 4.3E-41 240.4 7.6 195 48-315 3-202 (236)
49 2rfm_A Putative ankyrin repeat 100.0 2.2E-34 7.5E-39 220.3 17.8 167 9-198 24-190 (192)
50 1sw6_A Regulatory protein SWI6 100.0 2.1E-35 7.3E-40 244.2 11.2 196 22-271 99-326 (327)
51 4gpm_A Engineered protein OR26 100.0 3E-33 1E-37 208.1 19.2 153 55-231 6-164 (169)
52 3jxi_A Vanilloid receptor-rela 100.0 3.4E-34 1.2E-38 229.8 15.1 203 17-231 2-253 (260)
53 2vge_A RELA-associated inhibit 100.0 5.2E-35 1.8E-39 229.2 6.3 194 69-314 1-205 (229)
54 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-32 3.6E-37 206.4 18.2 161 15-198 9-169 (169)
55 3v31_A Ankyrin repeat family A 100.0 1E-32 3.4E-37 206.2 17.3 157 19-198 2-158 (167)
56 2etb_A Transient receptor pote 100.0 2.9E-33 9.9E-38 223.9 14.6 186 2-198 22-244 (256)
57 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.5E-32 8.5E-37 203.1 16.4 156 19-198 4-160 (162)
58 3v30_A DNA-binding protein rfx 100.0 4.2E-32 1.4E-36 203.9 17.7 156 20-198 2-158 (172)
59 4hbd_A KN motif and ankyrin re 100.0 2.8E-32 9.7E-37 220.1 17.4 181 20-223 76-271 (276)
60 3jxi_A Vanilloid receptor-rela 100.0 4.7E-33 1.6E-37 223.1 12.5 202 50-292 2-253 (260)
61 4hbd_A KN motif and ankyrin re 100.0 7.7E-33 2.6E-37 223.4 13.4 166 12-199 103-274 (276)
62 1awc_B Protein (GA binding pro 100.0 1.3E-31 4.4E-36 197.2 17.3 151 20-194 2-152 (153)
63 2aja_A Ankyrin repeat family p 100.0 1.5E-34 5.2E-39 241.3 -0.0 260 20-315 65-367 (376)
64 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.8E-31 3E-35 193.4 16.8 153 20-197 2-155 (156)
65 3twr_A Tankyrase-2; ankyrin re 100.0 2E-31 6.9E-36 198.7 13.2 159 16-198 4-163 (165)
66 2pnn_A Transient receptor pote 100.0 3.9E-31 1.3E-35 213.5 15.2 175 15-198 49-256 (273)
67 2rfm_A Putative ankyrin repeat 100.0 1.1E-30 3.7E-35 199.7 16.3 155 46-223 28-188 (192)
68 3v30_A DNA-binding protein rfx 100.0 4.6E-31 1.6E-35 198.2 14.0 163 108-300 2-171 (172)
69 3f6q_A Integrin-linked protein 100.0 9.4E-31 3.2E-35 197.7 14.6 158 18-198 3-161 (179)
70 2vge_A RELA-associated inhibit 100.0 2.5E-33 8.6E-38 219.7 -0.1 192 13-284 14-208 (229)
71 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.9E-30 1.3E-34 191.1 16.4 152 52-228 4-162 (162)
72 3v31_A Ankyrin repeat family A 100.0 8.2E-30 2.8E-34 190.4 16.5 155 52-230 2-162 (167)
73 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.9E-29 6.4E-34 188.7 18.0 153 50-226 11-169 (169)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 5.6E-31 1.9E-35 208.2 7.0 174 17-214 2-193 (239)
75 3f6q_A Integrin-linked protein 100.0 3E-29 1E-33 189.4 16.1 161 107-297 4-171 (179)
76 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.5E-31 5E-36 211.5 3.3 215 50-310 2-231 (239)
77 1d9s_A Cyclin-dependent kinase 100.0 1.2E-29 4.2E-34 182.7 12.2 133 11-167 3-136 (136)
78 1awc_B Protein (GA binding pro 100.0 1.4E-28 4.8E-33 180.9 17.0 145 53-221 2-152 (153)
79 2aja_A Ankyrin repeat family p 100.0 1.5E-31 5E-36 223.3 -0.4 158 13-198 85-248 (376)
80 1bi7_B P16INK4A, MTS1, multipl 100.0 1.8E-29 6.2E-34 186.2 9.8 146 13-182 5-151 (156)
81 3twr_A Tankyrase-2; ankyrin re 100.0 3.7E-28 1.3E-32 181.0 15.2 151 107-288 7-164 (165)
82 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.2E-27 4E-32 176.6 16.7 147 53-223 2-154 (156)
83 1n0r_A 4ANK, 4 ankyrin repeats 100.0 3.2E-27 1.1E-31 167.7 15.6 126 19-167 1-126 (126)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 2.2E-27 7.6E-32 170.8 13.4 127 15-163 9-135 (136)
85 1d9s_A Cyclin-dependent kinase 99.9 1.7E-27 5.7E-32 171.5 12.5 132 43-198 2-134 (136)
86 3t8k_A Uncharacterized protein 99.9 3.7E-28 1.3E-32 183.7 8.0 155 19-197 5-176 (186)
87 3t8k_A Uncharacterized protein 99.9 6.4E-27 2.2E-31 176.9 9.2 136 12-170 29-182 (186)
88 3deo_A Signal recognition part 99.9 1.2E-26 4.1E-31 175.7 10.3 143 15-197 39-181 (183)
89 3ui2_A Signal recognition part 99.9 2.4E-26 8.3E-31 181.9 11.0 142 16-197 41-182 (244)
90 3c5r_A BARD-1, BRCA1-associate 99.9 8E-27 2.7E-31 168.2 7.2 127 15-163 5-131 (137)
91 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-25 5.9E-30 160.9 13.8 126 50-198 11-136 (136)
92 1bi7_B P16INK4A, MTS1, multipl 99.9 7.5E-26 2.6E-30 166.8 11.9 128 47-198 6-134 (156)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.2E-25 2.1E-29 155.8 15.0 124 52-198 1-124 (126)
94 3deo_A Signal recognition part 99.9 5.7E-27 2E-31 177.5 3.7 139 50-223 41-180 (183)
95 3aaa_C Myotrophin, protein V-1 99.9 8.8E-26 3E-30 159.5 9.4 113 17-151 4-116 (123)
96 3ehr_A Osteoclast-stimulating 99.9 3.7E-26 1.3E-30 178.6 8.2 139 13-174 66-205 (222)
97 3c5r_A BARD-1, BRCA1-associate 99.9 7.8E-26 2.7E-30 163.0 7.8 131 43-197 1-131 (137)
98 2b0o_E UPLC1; arfgap, structur 99.9 3.4E-25 1.2E-29 180.3 11.9 138 54-214 152-298 (301)
99 3ui2_A Signal recognition part 99.9 3.1E-24 1.1E-28 169.8 12.5 171 19-228 14-185 (244)
100 2b0o_E UPLC1; arfgap, structur 99.9 4.5E-24 1.6E-28 173.7 10.8 90 137-228 186-284 (301)
101 3aaa_C Myotrophin, protein V-1 99.9 8E-24 2.7E-28 149.4 10.4 117 50-189 4-120 (123)
102 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-23 1E-27 138.7 11.4 93 19-133 1-93 (93)
103 3jue_A Arfgap with coiled-coil 99.9 3.8E-23 1.3E-27 171.9 13.1 126 16-163 195-323 (368)
104 3lvq_E ARF-GAP with SH3 domain 99.9 8.6E-23 2.9E-27 177.9 14.7 130 19-171 131-269 (497)
105 1dcq_A PYK2-associated protein 99.9 1.1E-22 3.9E-27 163.6 13.4 121 21-163 131-260 (278)
106 3ehr_A Osteoclast-stimulating 99.9 1.9E-23 6.5E-28 163.1 8.4 128 48-198 68-196 (222)
107 2l6b_A NR1C; ankyrin, consensu 99.9 3.1E-23 1.1E-27 144.5 8.1 109 15-145 4-112 (115)
108 3jue_A Arfgap with coiled-coil 99.9 7.5E-22 2.6E-26 164.1 13.2 140 51-211 197-346 (368)
109 3lvq_E ARF-GAP with SH3 domain 99.9 1.6E-21 5.3E-26 169.9 13.8 141 54-211 133-276 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3E-21 1E-25 128.9 11.5 92 52-166 1-92 (93)
111 1dcq_A PYK2-associated protein 99.9 1E-20 3.5E-25 152.2 16.4 118 109-228 131-263 (278)
112 2l6b_A NR1C; ankyrin, consensu 99.8 3.8E-21 1.3E-25 133.9 8.9 109 48-179 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 2.9E-20 9.8E-25 128.2 9.4 97 9-127 13-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 2E-18 6.9E-23 118.8 9.9 91 48-160 19-109 (110)
115 4g26_A Pentatricopeptide repea 74.3 12 0.00042 32.2 8.1 144 23-197 32-200 (501)
116 3mkq_B Coatomer subunit alpha; 63.8 39 0.0013 24.4 9.5 138 54-231 9-147 (177)
117 1gp8_A Protein (scaffolding pr 61.0 6.9 0.00024 19.8 2.2 17 24-40 17-33 (40)
118 4g26_A Pentatricopeptide repea 42.2 70 0.0024 27.5 7.0 98 122-223 91-199 (501)
119 3gvo_A Pumilio 2, pumilio homo 26.7 93 0.0032 25.2 5.0 60 138-197 178-239 (351)
120 3zrh_A Ubiquitin thioesterase 24.7 2.1E+02 0.007 23.9 6.4 49 27-75 29-91 (454)
121 3zrh_A Ubiquitin thioesterase 24.3 1.4E+02 0.0049 24.8 5.4 63 59-129 28-90 (454)
122 3gvo_A Pumilio 2, pumilio homo 22.9 3E+02 0.01 22.1 8.2 54 137-190 213-268 (351)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.5e-49 Score=341.18 Aligned_cols=304 Identities=23% Similarity=0.286 Sum_probs=225.0
Q ss_pred hhHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCcc
Q psy12892 2 WELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASI 81 (315)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~ 81 (315)
+++|++++ .+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 30 v~~Ll~~g-~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 108 (437)
T 1n11_A 30 VKNLLQRG-ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL 108 (437)
T ss_dssp HHHHHHTT-CCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC
T ss_pred HHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCC
Confidence 56677665 35888888999999999999999999999999999988888999999999999999999999999998888
Q ss_pred ccccchhhHHHhhhhh--hHHhhh---------hccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHH
Q psy12892 82 TDHQGIQRDIAAAGTS--VLANCL---------LMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAE 150 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~ 150 (315)
.+..+.+......... .....+ .+..|.||||+|+..|+.+++++|++.+.+++..+..|.||||+|+.
T Consensus 109 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 188 (437)
T 1n11_A 109 ATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVH 188 (437)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHH
Confidence 7776655433332221 111111 13467889999999999999999999999999889899999999999
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy12892 151 NGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNK 224 (315)
Q Consensus 151 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~ 224 (315)
.|+.+++++|+++ +.+++..+..+.|||++|+..++.+++++|++.+ +..|.||||.|+..++.+++++|++
T Consensus 189 ~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~- 266 (437)
T 1n11_A 189 HNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS- 266 (437)
T ss_dssp TTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-
T ss_pred cCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh-
Confidence 9999999999986 8888888888999999999999999999999876 5578899999999999999999998
Q ss_pred cCCccccCCCCCCCCCCcccc------chhhhhhHHH-----HHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeee
Q psy12892 225 KGINVAALGGEDLTGRPDLTV------GPVQAYLYQV-----YLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRM 293 (315)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~ 293 (315)
.+++++..+..+.+ ++.. ..+..++.+. ..+..|+||||+|+.. ++.+++++|+++|++++.+
T Consensus 267 ~~~~~~~~~~~g~t---~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~gad~n~~ 340 (437)
T 1n11_A 267 KQANGNLGNKSGLT---PLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHY---GNIKLVKFLLQHQADVNAK 340 (437)
T ss_dssp TTCCTTCCCTTCCC---HHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHS---SCSHHHHHHHHTTCCTTCC
T ss_pred cCCCCCCCCCCCCC---HHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHc---CcHHHHHHHHhcCCCCCCC
Confidence 89888876654433 1110 0111112211 1233455555555555 5555555555555555555
Q ss_pred ccCCceeEEEeecCchhhhhc
Q psy12892 294 TVDGTLILYYRGKDSKAQIEE 314 (315)
Q Consensus 294 ~~~g~t~l~~A~~~~~~~~~~ 314 (315)
|..|.|||++|++.|+.++++
T Consensus 341 ~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 341 TKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp CTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCCHHHHHHHCChHHHHH
Confidence 555555555555555555554
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-48 Score=336.03 Aligned_cols=283 Identities=26% Similarity=0.331 Sum_probs=230.7
Q ss_pred ChhHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCc
Q psy12892 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANAS 80 (315)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 80 (315)
++++|++++. +++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 95 ~v~~Ll~~ga-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 173 (437)
T 1n11_A 95 MVKLLLENNA-NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN 173 (437)
T ss_dssp HHHHHHHHTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHhCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 3577877764 588899999999999999999999999999999998889999999999999999999999999999988
Q ss_pred cccccchhhHHHhhhh--hhHHhhhh---------ccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHH
Q psy12892 81 ITDHQGIQRDIAAAGT--SVLANCLL---------MGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAA 149 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~ 149 (315)
..+..+.+........ ......+. +..|.||||+|+..++.+++++|++.|.+++..+..|.||||+|+
T Consensus 174 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 253 (437)
T 1n11_A 174 AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAA 253 (437)
T ss_dssp CCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 8877554443222211 11111111 135677888888888888888888888877777777888888888
Q ss_pred HcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHh
Q psy12892 150 ENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 150 ~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~ 223 (315)
..|+.+++++|+++ +.+++..+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+.+++.+++++|++
T Consensus 254 ~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 332 (437)
T 1n11_A 254 QEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ 332 (437)
T ss_dssp HTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH
T ss_pred HCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 88888888888875 7777777777888888888888888888887765 4567788888888888888888887
Q ss_pred ccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEE
Q psy12892 224 KKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYY 303 (315)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~ 303 (315)
.|++++.+ +..|+||||+|+.. ++.+++++|+++|++++.+|.+|.||+++
T Consensus 333 -~gad~n~~-------------------------~~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~ 383 (437)
T 1n11_A 333 -HQADVNAK-------------------------TKLGYSPLHQAAQQ---GHTDIVTLLLKNGASPNEVSSDGTTPLAI 383 (437)
T ss_dssp -TTCCTTCC-------------------------CTTSCCHHHHHHHT---TCHHHHHHHHHTTCCSCCCCSSSCCHHHH
T ss_pred -cCCCCCCC-------------------------CCCCCCHHHHHHHC---ChHHHHHHHHHCcCCCCCCCCCCCCHHHH
Confidence 78887774 67899999999999 99999999999999999999999999999
Q ss_pred eecCchhhhhc
Q psy12892 304 RGKDSKAQIEE 314 (315)
Q Consensus 304 A~~~~~~~~~~ 314 (315)
|.+.|+.++++
T Consensus 384 A~~~g~~~~~~ 394 (437)
T 1n11_A 384 AKRLGYISVTD 394 (437)
T ss_dssp HHHTTCHHHHH
T ss_pred HHHcCcHHHHH
Confidence 99999998876
No 3
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-48 Score=313.74 Aligned_cols=246 Identities=25% Similarity=0.301 Sum_probs=222.4
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHcCCccccc-CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhh
Q psy12892 18 INGDTALHLAARKRDLDMVRILVDYGTSVDIQ-NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 18 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 96 (315)
.+|.||||.|+..|+++++++|++.|++++.. +..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------ 70 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKK------------ 70 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT------------
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC------------
Confidence 46789999999999999999999999999877 77889999999999999999999999999887765
Q ss_pred hhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc-----
Q psy12892 97 SVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER----- 171 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~----- 171 (315)
.|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++. +.+++..
T Consensus 71 ----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~ 139 (285)
T 1wdy_A 71 ----------NGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKE 139 (285)
T ss_dssp ----------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCCH
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHh-CCCcccccccHH
Confidence 788999999999999999999999999999999999999999999999999999996 8888776
Q ss_pred -----ccCCccHHHHHHHcCcHHHHHHHHhc-C------CCCCCcHHHHHHHcCC----HHHHHHHHhccCCccccCCCC
Q psy12892 172 -----TKENYNVLHLAAMYSREDVVKLLLNK-K------GIENYNVLHLAAMYSR----EDVVKLLLNKKGINVAALGGE 235 (315)
Q Consensus 172 -----~~~~~~~l~~a~~~~~~~~~~~Ll~~-~------~~~~~~~l~~A~~~~~----~~~~~~Ll~~~~~~~~~~~~~ 235 (315)
+..|.||||+|+..++.+++++|++. + +..|.||||.|+..++ .+++++|++ .|++++.+
T Consensus 140 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~-~g~~~~~~--- 215 (285)
T 1wdy_A 140 DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD-HGADVNVR--- 215 (285)
T ss_dssp HHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHH-TTCCSSCC---
T ss_pred HHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHH-cCCCCCCc---
Confidence 67788999999999999999999976 4 5678899999999998 899999999 99999874
Q ss_pred CCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHh-hccceeeeccCCceeEEEeecCchhhhhc
Q psy12892 236 DLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLS-TAGREIRMTVDGTLILYYRGKDSKAQIEE 314 (315)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 314 (315)
+..|+||||+|+.. ++.+++++|++ .|++++.+|..|.|||++|++.|+.++++
T Consensus 216 ----------------------~~~g~t~L~~A~~~---~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~ 270 (285)
T 1wdy_A 216 ----------------------GERGKTPLILAVEK---KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAE 270 (285)
T ss_dssp ----------------------CTTSCCHHHHHHHT---TCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred ----------------------CCCCCcHHHHHHHc---CCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHH
Confidence 67788999999999 99999999999 89999999999999999999999999886
Q ss_pred C
Q psy12892 315 L 315 (315)
Q Consensus 315 l 315 (315)
+
T Consensus 271 ~ 271 (285)
T 1wdy_A 271 L 271 (285)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.2e-47 Score=315.79 Aligned_cols=267 Identities=23% Similarity=0.255 Sum_probs=228.8
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCC-CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 16 TTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNG-EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 16 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.+.+|.|+||.||+.|++++|++|+++|++++..+. .|.||||+|+..|+.++|++|+++|++++..+...........
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~ 100 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHH
Confidence 345689999999999999999999999999998875 4899999999999999999999999999888776544432222
Q ss_pred hhhhH--Hh---------hhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccC----------CCCCCcHHHHHHHcCC
Q psy12892 95 GTSVL--AN---------CLLMGEGQTALHIASAEGDEALVKYFYGAKANASIT----------DHQDRTPMHLAAENGH 153 (315)
Q Consensus 95 ~~~~~--~~---------~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~----------~~~~~~~l~~a~~~~~ 153 (315)
..... .. ...+..|.||+++|+..|+.+++++|++.|++++.. +..|.||||+|+..|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~ 180 (337)
T 4g8k_A 101 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGH 180 (337)
T ss_dssp HHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTC
T ss_pred hcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCC
Confidence 11111 11 113457899999999999999999999999887653 4468899999999999
Q ss_pred HHHHHHHHHhcCccccccccCCccHHHHHHHcCc----HHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHh
Q psy12892 154 ASIIELLADKFRASIFERTKENYNVLHLAAMYSR----EDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 154 ~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~ 223 (315)
.+++++|+++.|++++..+..|.++++.++..+. ..++++|++.| +..|.||||.|+..++.+++++|++
T Consensus 181 ~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 181 VEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 9999999987799999999999999998876543 46889999877 5678999999999999999999998
Q ss_pred ccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEE
Q psy12892 224 KKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYY 303 (315)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~ 303 (315)
..|++++.+ +..|+||||+|++. |+.++|++|+++|+|++.+ +||++
T Consensus 261 ~~~~~vn~~-------------------------d~~G~TpL~~A~~~---g~~~iv~~Ll~~GAd~n~~-----~~L~~ 307 (337)
T 4g8k_A 261 QEHIEINDT-------------------------DSDGKTALLLAVEL---KLKKIAELLCKRGASTDCG-----DLVMT 307 (337)
T ss_dssp STTCCTTCB-------------------------CTTSCBHHHHHHHT---TCHHHHHHHHTTSCSSTTC-----CHHHH
T ss_pred hcCCcccCc-------------------------CCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCC-----CHHHH
Confidence 678999985 67899999999999 9999999999999998754 59999
Q ss_pred eecCchhhhhcC
Q psy12892 304 RGKDSKAQIEEL 315 (315)
Q Consensus 304 A~~~~~~~~~~l 315 (315)
|++.|+.++|++
T Consensus 308 A~~~~~~~iv~~ 319 (337)
T 4g8k_A 308 ARRNYDHSLVKV 319 (337)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHcCCHHHHHH
Confidence 999999999874
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=6.6e-46 Score=297.96 Aligned_cols=240 Identities=22% Similarity=0.176 Sum_probs=220.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-------------- 67 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-------------- 67 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--------------
Confidence 689999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccH
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNV 178 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 178 (315)
.|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++. |.+++..+..|.||
T Consensus 68 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~ 137 (261)
T 2xai_A 68 --------DWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAY-GGNIDHKISHLGTP 137 (261)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTBCH
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcCCCCCCCH
Confidence 799999999999999999999999999875 44699999999999999999999996 99999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcC-----CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhH
Q psy12892 179 LHLAAMYSREDVVKLLLNKK-----GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLY 253 (315)
Q Consensus 179 l~~a~~~~~~~~~~~Ll~~~-----~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (315)
||+|+..++.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+
T Consensus 138 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~~~~--------------------- 195 (261)
T 2xai_A 138 LYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACLLMD-FGADTQAK--------------------- 195 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHHHHH-TTCCTTCC---------------------
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHHHHH-cCCCCCCc---------------------
Confidence 99999999999999999887 5578999999999999999999999 99999985
Q ss_pred HHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccc--------eeeeccCCceeEEEeecCchhhhh
Q psy12892 254 QVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGR--------EIRMTVDGTLILYYRGKDSKAQIE 313 (315)
Q Consensus 254 ~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~--------~~~~~~~g~t~l~~A~~~~~~~~~ 313 (315)
+..|+||||+|+.. + +++++|++++.+ ++++|..|.||++.|.+....+.+
T Consensus 196 ----d~~g~tpl~~A~~~---~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l 254 (261)
T 2xai_A 196 ----NAEGKRPVELVPPE---S--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDL 254 (261)
T ss_dssp ----CTTSCCGGGGSCTT---C--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHH
T ss_pred ----CCCCCChhhhcccc---c--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHH
Confidence 78899999999977 4 489999998764 458899999999999987766554
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.9e-45 Score=298.12 Aligned_cols=243 Identities=25% Similarity=0.283 Sum_probs=226.3
Q ss_pred hhHhhhhchhhcccc-ccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCc
Q psy12892 2 WELLSTQTAEQLKAT-TINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANAS 80 (315)
Q Consensus 2 ~~~l~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 80 (315)
+++|++.++ +++.+ +..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 21 v~~Ll~~g~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 99 (285)
T 1wdy_A 21 VQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN 99 (285)
T ss_dssp HHHHHHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCC-CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 567777765 46766 8899999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccC----------CCCCCcHHHHHHH
Q psy12892 81 ITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASIT----------DHQDRTPMHLAAE 150 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~----------~~~~~~~l~~a~~ 150 (315)
..+. .|.||||+|+..|+.+++++|++.|.+++.. +..|.||||+|+.
T Consensus 100 ~~~~----------------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 100 ECDF----------------------YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp CBCT----------------------TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred ccCc----------------------ccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 8776 7899999999999999999999999999877 7789999999999
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCc----HHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHH
Q psy12892 151 NGHASIIELLADKFRASIFERTKENYNVLHLAAMYSR----EDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKL 220 (315)
Q Consensus 151 ~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~ 220 (315)
.|+.+++++|++..+.+++..+..|.||||+|+..++ .+++++|++.+ +..|.||||+|+..++.+++++
T Consensus 158 ~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 237 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQR 237 (285)
T ss_dssp HTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 9999999999997799999999999999999999999 99999999887 5679999999999999999999
Q ss_pred HHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeecc
Q psy12892 221 LLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTV 295 (315)
Q Consensus 221 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~ 295 (315)
|++..|++++.+ +..|+||||+|++. ++.+++++|+++|++++.+|.
T Consensus 238 Ll~~~g~~~~~~-------------------------~~~g~t~l~~A~~~---~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 238 LLEQEHIEINDT-------------------------DSDGKTALLLAVEL---KLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp HHHSSSCCTTCC-------------------------CTTSCCHHHHHHHT---TCHHHHHHHHHHSSCSCCSSC
T ss_pred HHhccCCCcccc-------------------------CCCCCcHHHHHHHc---CcHHHHHHHHHcCCCCCcccc
Confidence 998789999985 67899999999999 999999999999999998873
No 7
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.7e-46 Score=315.91 Aligned_cols=252 Identities=22% Similarity=0.221 Sum_probs=226.4
Q ss_pred hchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccch
Q psy12892 8 QTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGI 87 (315)
Q Consensus 8 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 87 (315)
....+.+.+|.+|.||||+||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..
T Consensus 8 ~~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----- 82 (364)
T 3ljn_A 8 FPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLW----- 82 (364)
T ss_dssp --------CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCB-----
T ss_pred ccCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCcccc-----
Confidence 334567888999999999999999999999999999999999999999999999999999999999999965542
Q ss_pred hhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhC----CCCccc-----------------CCCCCCcHHH
Q psy12892 88 QRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGA----KANASI-----------------TDHQDRTPMH 146 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~~l~ 146 (315)
.|.||||+|+..|+.+++++|++. +.+++. .+..|.||||
T Consensus 83 -------------------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 143 (364)
T 3ljn_A 83 -------------------HGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALH 143 (364)
T ss_dssp -------------------TTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHH
T ss_pred -------------------CCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHH
Confidence 588999999999999999999998 777766 7788999999
Q ss_pred HHHHcC--CHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-----------CCCCCcHHHHHHHcC
Q psy12892 147 LAAENG--HASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK-----------GIENYNVLHLAAMYS 213 (315)
Q Consensus 147 ~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-----------~~~~~~~l~~A~~~~ 213 (315)
+|+..| +.+++++|++. |++++..+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+..+
T Consensus 144 ~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g 222 (364)
T 3ljn_A 144 WCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILIN 222 (364)
T ss_dssp HHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTT
T ss_pred HHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcC
Confidence 999999 99999999997 9999999999999999999999999999999865 457899999999999
Q ss_pred CHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceee-
Q psy12892 214 REDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIR- 292 (315)
Q Consensus 214 ~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~- 292 (315)
+.+++++|++ .|++++.. +..|.||||+|+.. ++.+++++|+++|++++.
T Consensus 223 ~~~~v~~Ll~-~gad~~~~-------------------------d~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~ 273 (364)
T 3ljn_A 223 WEDVAMRFVE-MGIDVNME-------------------------DNEHTVPLYLSVRA---AMVLLTKELLQKTDVFLIQ 273 (364)
T ss_dssp CHHHHHHHHT-TTCCTTCC-------------------------CTTSCCHHHHHHHT---CCHHHHHHHHHHSCHHHHH
T ss_pred CHHHHHHHHH-cCCCCCCC-------------------------CCCCCCHHHHHHHh---ChHHHHHHHHHcCCchhhh
Confidence 9999999999 99999985 77899999999999 999999999999988743
Q ss_pred -----------eccCCceeEEEeecCchhhhh
Q psy12892 293 -----------MTVDGTLILYYRGKDSKAQIE 313 (315)
Q Consensus 293 -----------~~~~g~t~l~~A~~~~~~~~~ 313 (315)
.+..+.||+++|+..|+.+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v 305 (364)
T 3ljn_A 274 ACPYHNGTTVLPDRVVWLDFVPAAADPSKQEV 305 (364)
T ss_dssp TCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHH
T ss_pred cCcccCcccccccccccccchhhhhccCHHHH
Confidence 567889999999999976654
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=300.07 Aligned_cols=242 Identities=17% Similarity=0.130 Sum_probs=180.0
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcC-----------CcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCcccccc
Q psy12892 17 TINGDTALHLAARKRDLDMVRILVDYG-----------TSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQ 85 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~ 85 (315)
...|.|+||+|+..|+.+.+..++..+ ..++..|..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~- 90 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA- 90 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECT-
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-
Confidence 457888999999988877666655442 12455778888999999999999999999988888887766
Q ss_pred chhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcC
Q psy12892 86 GIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFR 165 (315)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~ 165 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. +
T Consensus 91 ---------------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g 148 (285)
T 3d9h_A 91 ---------------------DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-G 148 (285)
T ss_dssp ---------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-T
T ss_pred ---------------------CCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHC-C
Confidence 688999999999999999999988888888888889999999999999999999985 7
Q ss_pred ccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCC
Q psy12892 166 ASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTG 239 (315)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 239 (315)
.+++..+ .|.||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.
T Consensus 149 ~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~-------- 218 (285)
T 3d9h_A 149 ASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE-SGADVNQ-------- 218 (285)
T ss_dssp CCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTC--------
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-CCCCCCC--------
Confidence 7776544 4888999999999999999998876 5567889999999999999999998 8888874
Q ss_pred CCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhc
Q psy12892 240 RPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEE 314 (315)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~ 314 (315)
+..|.||||+|+.. ++.+++++|+++|+|++.+|..|.|||++|++. .++++
T Consensus 219 ------------------~~~g~t~L~~A~~~---~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~--~~~~~ 270 (285)
T 3d9h_A 219 ------------------GKGQDSPLHAVVRT---ASEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPLAQ 270 (285)
T ss_dssp ------------------CBTTBCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--SHHHH
T ss_pred ------------------CCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcCc--cHHHH
Confidence 45678999999998 889999999999999999999999999998843 45543
No 9
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.5e-45 Score=299.53 Aligned_cols=248 Identities=24% Similarity=0.303 Sum_probs=192.6
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCc---ccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhh
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTS---VDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
++.+|.+|.||||+||..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~----- 76 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER----- 76 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-----
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----
Confidence 577899999999999999999999999999988 888999999999999999999999999999999998876
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccC-------------CCCCCcHHHHHHHcCCHHH
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASIT-------------DHQDRTPMHLAAENGHASI 156 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~-------------~~~~~~~l~~a~~~~~~~~ 156 (315)
.|.||||+|+..++.+++++|++.+.+.... ...+.++++.+...+....
T Consensus 77 -----------------~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (282)
T 1oy3_D 77 -----------------GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENE 139 (282)
T ss_dssp -----------------TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------------------------------
T ss_pred -----------------CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchh
Confidence 7999999999999999999999988764322 2234566777666665554
Q ss_pred HHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------C-CCCCcHHHHHHHcCCHHHHHHHHhccCCcc
Q psy12892 157 IELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------G-IENYNVLHLAAMYSREDVVKLLLNKKGINV 229 (315)
Q Consensus 157 ~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~-~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~ 229 (315)
...++...+.+++..+..|.||||+|+..|+.+++++|++.+ + ..|.||||+|+..++.+++++|++ .|+++
T Consensus 140 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~ 218 (282)
T 1oy3_D 140 EEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK-AGADP 218 (282)
T ss_dssp ----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCT
T ss_pred hhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCC
Confidence 444444468889999999999999999999999999999887 2 349999999999999999999999 89999
Q ss_pred ccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCch
Q psy12892 230 AALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSK 309 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 309 (315)
+.+ +..|+||||+|+.. ++.+++++|+++|++++.+|..|.||+++|.....
T Consensus 219 ~~~-------------------------d~~g~tpL~~A~~~---~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 219 TAR-------------------------MYGGRTPLGSALLR---PNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp TCC-------------------------CTTSCCHHHHHHTS---SCHHHHHHHHHTTCCCCCCC---------------
T ss_pred ccc-------------------------ccCCCCHHHHHHHc---CCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 985 67899999999999 99999999999999999999999999999988665
Q ss_pred hh
Q psy12892 310 AQ 311 (315)
Q Consensus 310 ~~ 311 (315)
.+
T Consensus 271 ~~ 272 (282)
T 1oy3_D 271 SD 272 (282)
T ss_dssp --
T ss_pred cc
Confidence 43
No 10
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=9.3e-45 Score=303.88 Aligned_cols=245 Identities=22% Similarity=0.268 Sum_probs=164.5
Q ss_pred hhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhh
Q psy12892 10 AEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 10 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
+.+++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 48 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~----- 122 (351)
T 3utm_A 48 NVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL----- 122 (351)
T ss_dssp TTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----
T ss_pred CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-----
Confidence 334455555555555555555555555555555555555555555555555555555555555555555444433
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHH---------------------
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLA--------------------- 148 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a--------------------- 148 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.+|++++
T Consensus 123 -----------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~ 185 (351)
T 3utm_A 123 -----------------WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQA 185 (351)
T ss_dssp -----------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHH
Confidence 344555555555555555555555555555555555444332
Q ss_pred HHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHc---CcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHH
Q psy12892 149 AENGHASIIELLADKFRASIFERTKENYNVLHLAAMY---SREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVK 219 (315)
Q Consensus 149 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~ 219 (315)
+..+..+.++.++.. .......+..+.||||+|+.. +..+++++|++.+ +..|.||||.|+..++.++++
T Consensus 186 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~ 264 (351)
T 3utm_A 186 AREADLAKVKKTLAL-EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264 (351)
T ss_dssp HHTTCHHHHHHHTTT-CCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred HHhccHHHHHHHHHh-hcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHH
Confidence 223333333333332 222223446678999999998 6689999999876 667899999999999999999
Q ss_pred HHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCce
Q psy12892 220 LLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTL 299 (315)
Q Consensus 220 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t 299 (315)
+|++ .|++++.+ +..|+||||+|+.. ++.+++++|+++|+|++.+|..|.|
T Consensus 265 ~Ll~-~ga~~n~~-------------------------d~~g~t~L~~A~~~---~~~~~v~~Ll~~gad~~~~~~~g~t 315 (351)
T 3utm_A 265 VLHK-HGAKMNAL-------------------------DSLGQTALHRAALA---GHLQTCRLLLSYGSDPSIISLQGFT 315 (351)
T ss_dssp HHHH-TTCCTTCC-------------------------CTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHH-CCCCCCCc-------------------------CCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCCCcCCCCCC
Confidence 9999 99999985 67899999999999 9999999999999999999999999
Q ss_pred eEEEeec
Q psy12892 300 ILYYRGK 306 (315)
Q Consensus 300 ~l~~A~~ 306 (315)
|+++|..
T Consensus 316 al~~a~~ 322 (351)
T 3utm_A 316 AAQMGNE 322 (351)
T ss_dssp HHHHSCH
T ss_pred hhhhhhH
Confidence 9999855
No 11
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2.2e-46 Score=315.66 Aligned_cols=249 Identities=20% Similarity=0.247 Sum_probs=222.2
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccC-CCCChHHHHHHhcCCHHHHHHHH--------hccCCCcccc
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQN-GEGQTALHIASAEGDEALVKYFY--------GAKANASITD 83 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~~~v~~Ll--------~~~~~~~~~~ 83 (315)
.+.++..|.||||.|+..+ .+++++|+. .+++..| ..|.||||+|+..|+.+++++|+ +.|++++..+
T Consensus 87 ~~~~~~~g~t~L~~Aa~~~-~~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d 163 (373)
T 2fo1_E 87 PTEPEPESPIKLHTEAAGS-YAITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD 163 (373)
T ss_dssp -------CCCHHHHHHHSS-SCCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCC
T ss_pred ccCCCCCCccHHHHHhcCC-chHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 3567889999999999955 488888865 4677777 78999999999999998888776 7899999887
Q ss_pred ccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 84 HQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
. .|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.
T Consensus 164 ~----------------------~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ 221 (373)
T 2fo1_E 164 C----------------------DENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNS 221 (373)
T ss_dssp T----------------------TSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTS
T ss_pred C----------------------CCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhc
Confidence 6 799999999999999999999999999999999999999999999999999999986
Q ss_pred cC---ccccccccCCccHHHHHHHcC---cHHHHHHHHhcC--------------CCCCCcHHHHHHHcCCHHHHHHHHh
Q psy12892 164 FR---ASIFERTKENYNVLHLAAMYS---REDVVKLLLNKK--------------GIENYNVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 164 ~~---~~~~~~~~~~~~~l~~a~~~~---~~~~~~~Ll~~~--------------~~~~~~~l~~A~~~~~~~~~~~Ll~ 223 (315)
+ .+++..+..|.||||+|+..+ +.+++++|++.+ +..|.||||+|+..++.+++++|++
T Consensus 222 -~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 300 (373)
T 2fo1_E 222 -TKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300 (373)
T ss_dssp -HHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred -CccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence 5 788999999999999999998 899999999876 2368999999999999999999998
Q ss_pred ccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEE
Q psy12892 224 KKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYY 303 (315)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~ 303 (315)
..+++++.. +..|+||||+|+.. |+.+++++|+++|++++.+|..|.|||++
T Consensus 301 ~~~~~~n~~-------------------------d~~g~TpL~~A~~~---g~~~iv~~Ll~~gad~~~~d~~g~t~l~~ 352 (373)
T 2fo1_E 301 EKGSNKDKQ-------------------------DEDGKTPIMLAAQE---GRIEVVMYLIQQGASVEAVDATDHTARQL 352 (373)
T ss_dssp HSCCCTTCC-------------------------CTTCCCHHHHHHHH---TCHHHHHHHHHTTCCSSCCCSSSCCHHHH
T ss_pred hcCCCccCc-------------------------CCCCCCHHHHHHHc---CCHHHHHHHHHcCCCccCCCCCCCCHHHH
Confidence 456999985 67899999999999 99999999999999999999999999999
Q ss_pred eecCchhhhhcC
Q psy12892 304 RGKDSKAQIEEL 315 (315)
Q Consensus 304 A~~~~~~~~~~l 315 (315)
|+++|+.+++++
T Consensus 353 A~~~g~~~iv~~ 364 (373)
T 2fo1_E 353 AQANNHHNIVDI 364 (373)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHcCCHHHHHH
Confidence 999999999874
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=285.77 Aligned_cols=226 Identities=22% Similarity=0.222 Sum_probs=207.3
Q ss_pred hccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHH
Q psy12892 12 QLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDI 91 (315)
Q Consensus 12 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 91 (315)
.++.+|.+|.||||+||..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 51 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~------- 123 (285)
T 3d9h_A 51 PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA------- 123 (285)
T ss_dssp TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-------
T ss_pred cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-------
Confidence 4788999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q psy12892 92 AAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER 171 (315)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 171 (315)
.|.||||+|+..|+.+++++|++.|.+++..+ .|.||||+|+..|+.+++++|++. +.+++..
T Consensus 124 ---------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~ 186 (285)
T 3d9h_A 124 ---------------DWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAY-GGNIDHK 186 (285)
T ss_dssp ---------------TCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHT-TCCTTCC
T ss_pred ---------------CCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc
Confidence 79999999999999999999999999987654 599999999999999999999996 9999999
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHhcC-----CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccc
Q psy12892 172 TKENYNVLHLAAMYSREDVVKLLLNKK-----GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVG 246 (315)
Q Consensus 172 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~-----~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 246 (315)
+..|.||||+|+..++.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+
T Consensus 187 d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~-------------- 251 (285)
T 3d9h_A 187 ISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMD-FGADTQAK-------------- 251 (285)
T ss_dssp BTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTCC--------------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCc--------------
Confidence 999999999999999999999999887 5578999999999999999999999 99999985
Q ss_pred hhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhh-ccceee
Q psy12892 247 PVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLST-AGREIR 292 (315)
Q Consensus 247 ~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~-g~~~~~ 292 (315)
+..|+||||+|+.. .+++++|+++ |+++..
T Consensus 252 -----------d~~g~t~l~~A~~~-----~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 252 -----------NAEGKRPVELVPPE-----SPLAQLFLEREGASLPK 282 (285)
T ss_dssp -----------CTTSCCGGGGSCTT-----SHHHHHHHHHC------
T ss_pred -----------CCCCCCHHHHhcCc-----cHHHHHHHHhhccCCCC
Confidence 78899999999965 4899999998 877654
No 13
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.2e-44 Score=286.92 Aligned_cols=225 Identities=23% Similarity=0.253 Sum_probs=176.1
Q ss_pred hccccccCCCcHHHHHHHcC-------------CHHHHHHHHHcCCcccc-cCCCCChHHHHHHhcCCHHHHHHHHhccC
Q psy12892 12 QLKATTINGDTALHLAARKR-------------DLDMVRILVDYGTSVDI-QNGEGQTALHIASAEGDEALVKYFYGAKA 77 (315)
Q Consensus 12 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~ 77 (315)
++|.+|.+|.||||+|+..| +.+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 58899999999999999987 89999999999999865 48999999999999999999999999999
Q ss_pred CCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCC-CcccCCCCCCcHHHHHHHcCCHHH
Q psy12892 78 NASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKA-NASITDHQDRTPMHLAAENGHASI 156 (315)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~ 156 (315)
+++..+. .|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..|+.++
T Consensus 82 ~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (253)
T 1yyh_A 82 DANIQDN----------------------MGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGM 139 (253)
T ss_dssp CTTCCCT----------------------TSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSH
T ss_pred CCCCCCC----------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHH
Confidence 9988776 79999999999999999999999987 889999999999999999999999
Q ss_pred HHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccc
Q psy12892 157 IELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVA 230 (315)
Q Consensus 157 ~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~ 230 (315)
+++|++. |++++..+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++
T Consensus 140 v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~ 217 (253)
T 1yyh_A 140 LEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD-HFANRD 217 (253)
T ss_dssp HHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTT
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCcc
Confidence 9999996 9999999999999999999999999999999887 6679999999999999999999999 999999
Q ss_pred cCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhcc
Q psy12892 231 ALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAG 288 (315)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~ 288 (315)
.+ +..|+|||++|++. |+.+++++|.+..-
T Consensus 218 ~~-------------------------d~~g~tpl~~A~~~---g~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 218 IT-------------------------DHMDRLPRDIAQER---MHHDIVRLLDLEHH 247 (253)
T ss_dssp CC-------------------------CTTCCCHHHHHHHT---TCHHHHHHHHC---
T ss_pred cc-------------------------ccCCCCHHHHHHHc---CCHHHHHHHHHHhh
Confidence 85 77899999999999 99999999998643
No 14
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-43 Score=280.59 Aligned_cols=224 Identities=25% Similarity=0.293 Sum_probs=202.6
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHH----cCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchh
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVD----YGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQ 88 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 88 (315)
++.+|.+|.||||+||..|+.+++++|++ .|.+++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---- 77 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDR---- 77 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC----
Confidence 56789999999999999999999999997 7999999999999999999999999999999999999988776
Q ss_pred hHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCC----CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q psy12892 89 RDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKA----NASITDHQDRTPMHLAAENGHASIIELLADKF 164 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 164 (315)
.|.||||+|+..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.
T Consensus 78 ------------------~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~- 138 (241)
T 1k1a_A 78 ------------------HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLER- 138 (241)
T ss_dssp ------------------TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred ------------------CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHc-
Confidence 78999999999999999999999887 7888899999999999999999999999996
Q ss_pred Cccccccc-cCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCC
Q psy12892 165 RASIFERT-KENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDL 237 (315)
Q Consensus 165 ~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 237 (315)
+.+++..+ ..|.||||+|+..++.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+
T Consensus 139 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~----- 212 (241)
T 1k1a_A 139 GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVR-SGADSSLK----- 212 (241)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCC-----
T ss_pred CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCCc-----
Confidence 99999888 78999999999999999999999887 6678999999999999999999999 99999985
Q ss_pred CCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhcc
Q psy12892 238 TGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAG 288 (315)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~ 288 (315)
+..|.||||+|+.. ++.++++.|++.++
T Consensus 213 --------------------~~~g~tpl~~A~~~---~~~~i~~~l~~~~a 240 (241)
T 1k1a_A 213 --------------------NCHNDTPLMVARSR---RVIDILRGKATRPA 240 (241)
T ss_dssp --------------------CTTSCCTTTTCSSH---HHHHHHTC------
T ss_pred --------------------CCCCCCHHHHHHhc---CcHHHHhhhccCCC
Confidence 67899999999999 99999999998865
No 15
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=3.3e-44 Score=300.56 Aligned_cols=253 Identities=21% Similarity=0.205 Sum_probs=229.2
Q ss_pred hhccccccCCCcHHHHHHHcCCHHHHHHHHHc-CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhh
Q psy12892 11 EQLKATTINGDTALHLAARKRDLDMVRILVDY-GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 11 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
...+.++..|.|+||.|++.|+.+.++.|+.. +.+++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 15 ~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----- 89 (351)
T 3utm_A 15 AKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDK----- 89 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----
T ss_pred eeeeeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-----
Confidence 34667788999999999999999999999875 899999999999999999999999999999999999988876
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccc
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIF 169 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 169 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++
T Consensus 90 -----------------~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~ 151 (351)
T 3utm_A 90 -----------------GGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSH-GADPT 151 (351)
T ss_dssp -----------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTT
T ss_pred -----------------CCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCc
Confidence 799999999999999999999999999999999999999999999999999999996 99999
Q ss_pred ccccCCccHHHHHH---------------------HcCcHHHHHHHHhcC------CCCCCcHHHHHHHc---CCHHHHH
Q psy12892 170 ERTKENYNVLHLAA---------------------MYSREDVVKLLLNKK------GIENYNVLHLAAMY---SREDVVK 219 (315)
Q Consensus 170 ~~~~~~~~~l~~a~---------------------~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~---~~~~~~~ 219 (315)
..+..+.+++++++ ..+..+.+..++... +..|.||||.|+.. ++.++++
T Consensus 152 ~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~ 231 (351)
T 3utm_A 152 LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAE 231 (351)
T ss_dssp CCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHH
T ss_pred cccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHH
Confidence 99999999887754 444455555554433 56788999999999 6689999
Q ss_pred HHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCce
Q psy12892 220 LLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTL 299 (315)
Q Consensus 220 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t 299 (315)
+|++ .|++++.+ +..|+||||+|+.. ++.+++++|+++|++++.+|..|.|
T Consensus 232 ~Ll~-~g~~~~~~-------------------------~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~n~~d~~g~t 282 (351)
T 3utm_A 232 LLLR-KGANVNEK-------------------------NKDFMTPLHVAAER---AHNDVMEVLHKHGAKMNALDSLGQT 282 (351)
T ss_dssp HHHH-TTCCTTCC-------------------------CTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred HHHH-cCCCcCCc-------------------------CCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 9999 99999985 67899999999999 9999999999999999999999999
Q ss_pred eEEEeecCchhhhhcC
Q psy12892 300 ILYYRGKDSKAQIEEL 315 (315)
Q Consensus 300 ~l~~A~~~~~~~~~~l 315 (315)
||++|++.|+.+++++
T Consensus 283 ~L~~A~~~~~~~~v~~ 298 (351)
T 3utm_A 283 ALHRAALAGHLQTCRL 298 (351)
T ss_dssp HHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCcHHHHHH
Confidence 9999999999999874
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.3e-42 Score=275.14 Aligned_cols=222 Identities=28% Similarity=0.363 Sum_probs=209.4
Q ss_pred hccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHH
Q psy12892 12 QLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDI 91 (315)
Q Consensus 12 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 91 (315)
+++.+|.+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 3 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------- 75 (237)
T 3b7b_A 3 NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA------- 75 (237)
T ss_dssp CCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-------
T ss_pred CcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-------
Confidence 5788999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred HhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC-CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccc
Q psy12892 92 AAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK-ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFE 170 (315)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 170 (315)
.|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..|+.+++++|++. |.+++.
T Consensus 76 ---------------~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~ 139 (237)
T 3b7b_A 76 ---------------EGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK-GSDINI 139 (237)
T ss_dssp ---------------TSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTC
T ss_pred ---------------CCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCc
Confidence 7899999999999999999999998 88899999999999999999999999999996 999999
Q ss_pred cccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccc
Q psy12892 171 RTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLT 244 (315)
Q Consensus 171 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 244 (315)
.+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~------------ 206 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS-RDSDVTLK------------ 206 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCC------------
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH-cCCCCCcc------------
Confidence 9999999999999999999999999887 5678999999999999999999999 99999985
Q ss_pred cchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHh
Q psy12892 245 VGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLS 285 (315)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~ 285 (315)
+..|+||||+|+.. ++.+.+..|++
T Consensus 207 -------------d~~g~t~l~~A~~~---~~~~~~~~l~~ 231 (237)
T 3b7b_A 207 -------------NKEGETPLQCASLN---SQVWSALQMSK 231 (237)
T ss_dssp -------------CTTSCCHHHHSCTT---CHHHHHHHHHH
T ss_pred -------------CCCCCCHHHHHHHH---HHHHHHHHHHH
Confidence 78899999999999 99877776665
No 17
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-44 Score=289.42 Aligned_cols=221 Identities=24% Similarity=0.279 Sum_probs=172.5
Q ss_pred cccccCCCCChHHHHHHhcC-------------CHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChH
Q psy12892 45 SVDIQNGEGQTALHIASAEG-------------DEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTA 111 (315)
Q Consensus 45 ~~~~~~~~g~t~l~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (315)
|++.+|..|.||||+|+..| +.+++++|+++|++++..... .|.||
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~---------------------~g~t~ 60 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDR---------------------TGETA 60 (253)
T ss_dssp --------------------------------------------------CCCT---------------------TSCCH
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCC---------------------CCCcH
Confidence 67889999999999999977 899999999999988654222 79999
Q ss_pred HHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHH
Q psy12892 112 LHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVV 191 (315)
Q Consensus 112 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~ 191 (315)
||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++....+++..+..|.||||+|+..++.+++
T Consensus 61 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 140 (253)
T 1yyh_A 61 LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGML 140 (253)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHH
Confidence 99999999999999999999999999999999999999999999999999974458999999999999999999999999
Q ss_pred HHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcc
Q psy12892 192 KLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAV 265 (315)
Q Consensus 192 ~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L 265 (315)
++|++.+ +..|.||||+|+..++.+++++|++ .|++++.. +..|.|||
T Consensus 141 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~~g~tpL 194 (253)
T 1yyh_A 141 EDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQ-------------------------NNREETPL 194 (253)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCC-------------------------CTTSCCHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCc-------------------------CCCCCCHH
Confidence 9999876 6679999999999999999999999 99999985 67899999
Q ss_pred eeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 266 HLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 266 ~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
|+|+.. ++.+++++|+++|++++.+|..|.||+++|+++|+.+|+++
T Consensus 195 ~~A~~~---~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~ 241 (253)
T 1yyh_A 195 FLAARE---GSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRL 241 (253)
T ss_dssp HHHHHH---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHC---CCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHH
Confidence 999999 99999999999999999999999999999999999999863
No 18
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-42 Score=289.19 Aligned_cols=245 Identities=23% Similarity=0.229 Sum_probs=205.0
Q ss_pred ChhHhhhhchhhcccccc-CCCcHHHHHHHcCCHHHHHHHHHcCCccc--------------------------------
Q psy12892 1 IWELLSTQTAEQLKATTI-NGDTALHLAARKRDLDMVRILVDYGTSVD-------------------------------- 47 (315)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------------------------------- 47 (315)
++++|++++. ++|.++. .|.||||+||..|+.++|++|+++|++++
T Consensus 40 ~V~~LL~~Ga-dvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (337)
T 4g8k_A 40 LVQQLLEGGA-NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADV 118 (337)
T ss_dssp HHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT
T ss_pred HHHHHHHCCC-CCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchh
Confidence 3678888764 6888875 59999999999999999999999998754
Q ss_pred -ccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHH
Q psy12892 48 -IQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKY 126 (315)
Q Consensus 48 -~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ 126 (315)
..|..|.||||+|+..|+.+++++|+++|++++......... ...+..|.||||+|+..|+.+++++
T Consensus 119 ~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~------------~~~~~~g~T~L~~A~~~g~~~~v~~ 186 (337)
T 4g8k_A 119 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ------------ERLRKGGATALMDAAEKGHVEVLKI 186 (337)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----------------CTTCSCCHHHHHHHHTCHHHHHH
T ss_pred hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc------------ccccCCCCcHHHHHHHCCCHHHHHH
Confidence 445667788888888888888888888887776554321110 1112368999999999999999999
Q ss_pred HHh-CCCCcccCCCCCCcHHHHHHHcCC----HHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC---
Q psy12892 127 FYG-AKANASITDHQDRTPMHLAAENGH----ASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK--- 198 (315)
Q Consensus 127 Ll~-~~~~~~~~~~~~~~~l~~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~--- 198 (315)
|++ .|++++..+..|.++++.++..+. ..++++|+++ |++++..+..|.||||+|+..++.+++++|++..
T Consensus 187 LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~ 265 (337)
T 4g8k_A 187 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE 265 (337)
T ss_dssp HHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC
T ss_pred HHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc
Confidence 995 699999999999999999887554 4588899986 9999999999999999999999999999999753
Q ss_pred ----CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCC
Q psy12892 199 ----GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTG 274 (315)
Q Consensus 199 ----~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~ 274 (315)
+..|.||||+|+..|+.+++++|++ .|++++.. +|||+|++.
T Consensus 266 vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GAd~n~~------------------------------~~L~~A~~~--- 311 (337)
T 4g8k_A 266 INDTDSDGKTALLLAVELKLKKIAELLCK-RGASTDCG------------------------------DLVMTARRN--- 311 (337)
T ss_dssp TTCBCTTSCBHHHHHHHTTCHHHHHHHHT-TSCSSTTC------------------------------CHHHHHHHT---
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCC------------------------------CHHHHHHHc---
Confidence 6789999999999999999999999 99998763 699999999
Q ss_pred CcHHHHHHHHhhccceeee
Q psy12892 275 TATSILRALLSTAGREIRM 293 (315)
Q Consensus 275 ~~~~~i~~Ll~~g~~~~~~ 293 (315)
++.++|++||++||+||..
T Consensus 312 ~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 312 YDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp TCHHHHHHHHHTTCCC---
T ss_pred CCHHHHHHHHHCcCCCCCC
Confidence 9999999999999999864
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=5.9e-43 Score=277.74 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=201.2
Q ss_pred cccCCCCChHHHHHHhcCCHHHHHHHHh----ccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHH
Q psy12892 47 DIQNGEGQTALHIASAEGDEALVKYFYG----AKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEA 122 (315)
Q Consensus 47 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~ 122 (315)
+..|.+|.||||+|+..|+.+++++|++ .+.+++..+. .|.||||+|+..|+.+
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~ 60 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN----------------------LRQTPLHLAVITTLPS 60 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCT----------------------TSCCHHHHHHHTTCHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccc----------------------cCCCHHHHHHHcCCHH
Confidence 4678999999999999999999999997 7888887776 7999999999999999
Q ss_pred HHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc----cccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 123 LVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRA----SIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 123 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~----~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
++++|++.|.+++..+..|.||||+|+..|+.+++++|++. +. +++..+..|.||||+|+..++.+++++|++.+
T Consensus 61 ~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 139 (241)
T 1k1a_A 61 VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDS-AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERG 139 (241)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999997 55 78888999999999999999999999999987
Q ss_pred ------C-CCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeecc
Q psy12892 199 ------G-IENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSR 271 (315)
Q Consensus 199 ------~-~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~ 271 (315)
+ ..|.||||.|+..++.+++++|++ .|++++.. +..|+||||+|+..
T Consensus 140 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-------------------------~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 140 ADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ-HGANVNAQ-------------------------MYSGSSALHSASGR 193 (241)
T ss_dssp CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCB-------------------------CTTSCBHHHHHHHH
T ss_pred CCcccccccCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCc-------------------------CCCCCCHHHHHHHc
Confidence 2 568999999999999999999999 99999985 67899999999999
Q ss_pred CCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 272 QTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 272 ~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
++.+++++|+++|++++.+|..|.||+++|+..|+.++++.
T Consensus 194 ---~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~ 234 (241)
T 1k1a_A 194 ---GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRG 234 (241)
T ss_dssp ---TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC
T ss_pred ---CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhh
Confidence 99999999999999999999999999999999999999874
No 20
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1e-42 Score=275.65 Aligned_cols=218 Identities=22% Similarity=0.278 Sum_probs=205.6
Q ss_pred CcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHH
Q psy12892 44 TSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEAL 123 (315)
Q Consensus 44 ~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~ 123 (315)
.+++..|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.++
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~~ 59 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE----------------------DQRTPLMEAAENNHLEA 59 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TCCCHHHHHHHTTCHHH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCC----------------------CCCCHHHHHHHhCCHHH
Confidence 46777899999999999999999999999999999988776 78999999999999999
Q ss_pred HHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-----
Q psy12892 124 VKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK----- 198 (315)
Q Consensus 124 v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~----- 198 (315)
+++|++.|.+++..+..|.||||+|+..|+.+++++|++..+.+++..+..|.|||++|+..++.+++++|++.+
T Consensus 60 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 139 (237)
T 3b7b_A 60 VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI 139 (237)
T ss_dssp HHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 999999999999999999999999999999999999999744899999999999999999999999999999877
Q ss_pred -CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcH
Q psy12892 199 -GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTAT 277 (315)
Q Consensus 199 -~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 277 (315)
+..|.||||.|+..++.+++++|++ .|++++.. +..|.||||+|++. ++.
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~-------------------------~~~g~t~L~~A~~~---~~~ 190 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLA-AKCDLHAV-------------------------NIHGDSPLHIAARE---NRY 190 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHT-TTCCTTCC-------------------------CTTCCCHHHHHHHT---TCH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCc-------------------------CCCCCCHHHHHHHh---CCH
Confidence 5678999999999999999999999 99999885 67799999999999 999
Q ss_pred HHHHHHHhhccceeeeccCCceeEEEeecCchhhh
Q psy12892 278 SILRALLSTAGREIRMTVDGTLILYYRGKDSKAQI 312 (315)
Q Consensus 278 ~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 312 (315)
+++++|+++|++++.+|..|.|||++|++.|+.+.
T Consensus 191 ~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 191 DCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred hHHHHHHHcCCCCCccCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998854
No 21
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-43 Score=290.93 Aligned_cols=238 Identities=21% Similarity=0.259 Sum_probs=211.4
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhh
Q psy12892 16 TTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAG 95 (315)
Q Consensus 16 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 95 (315)
.+..|.||||.||..|+++++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~----------- 104 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN----------- 104 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-----------
Confidence 456788999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCC
Q psy12892 96 TSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKEN 175 (315)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 175 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++++...+.+++.....+
T Consensus 105 -----------~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~ 173 (299)
T 1s70_B 105 -----------EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEE 173 (299)
T ss_dssp -----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred -----------CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhh
Confidence 799999999999999999999999999999999999999999999999999999988787776554443
Q ss_pred ccHHHHHHHcCcHHHHHHHHhcC-------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchh
Q psy12892 176 YNVLHLAAMYSREDVVKLLLNKK-------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPV 248 (315)
Q Consensus 176 ~~~l~~a~~~~~~~~~~~Ll~~~-------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (315)
.+++. ..+..++..+ +..|.||||.|+..|+.+++++|++ .|++++..
T Consensus 174 ~~~~~--------~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~---------------- 228 (299)
T 1s70_B 174 ERIML--------RDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIK---------------- 228 (299)
T ss_dssp HHHHH--------HHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCC----------------
T ss_pred hhHHH--------HHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCc----------------
Confidence 33333 2233444443 4578999999999999999999999 99999985
Q ss_pred hhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhh
Q psy12892 249 QAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQI 312 (315)
Q Consensus 249 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 312 (315)
+..|.||||+|+.. ++.+++++|+++|+|++.+|..|.|||++|.+.....+
T Consensus 229 ---------d~~g~tpL~~A~~~---~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l 280 (299)
T 1s70_B 229 ---------DYDGWTPLHAAAHW---GKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYL 280 (299)
T ss_dssp ---------CTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHH
T ss_pred ---------CCCCCcHHHHHHhc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 67899999999999 99999999999999999999999999999987554433
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=7.1e-42 Score=269.75 Aligned_cols=222 Identities=21% Similarity=0.256 Sum_probs=208.3
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCc-ccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhh
Q psy12892 17 TINGDTALHLAARKRDLDMVRILVDYGTS-VDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAG 95 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 95 (315)
+..+.+|||.|+..|+++.+++|++.+.. ++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------- 71 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD----------- 71 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-----------
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-----------
Confidence 34688999999999999999999988654 677899999999999999999999999999999988776
Q ss_pred hhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCC
Q psy12892 96 TSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKEN 175 (315)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 175 (315)
.|.||||+|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++. +.+++..+..+
T Consensus 72 -----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g 139 (231)
T 3aji_A 72 -----------AGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG-GANPDAKDHYD 139 (231)
T ss_dssp -----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTS
T ss_pred -----------CCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCC
Confidence 789999999999999999999999999999999999999999999999999999996 99999999999
Q ss_pred ccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhh
Q psy12892 176 YNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQ 249 (315)
Q Consensus 176 ~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (315)
.||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+
T Consensus 140 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~----------------- 201 (231)
T 3aji_A 140 ATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVT-QGASIYIE----------------- 201 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCC-----------------
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCC-----------------
Confidence 99999999999999999999877 5678999999999999999999999 99999884
Q ss_pred hhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccce
Q psy12892 250 AYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGRE 290 (315)
Q Consensus 250 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~ 290 (315)
+..|.|||++|+.. ++.+++++|+++|+++
T Consensus 202 --------~~~g~t~l~~A~~~---~~~~i~~lL~~~~a~i 231 (231)
T 3aji_A 202 --------NKEEKTPLQVAKGG---LGLILKRLAEGEEASM 231 (231)
T ss_dssp --------CTTSCCHHHHSCHH---HHHHHHHHHHHHHHCC
T ss_pred --------CCCCCCHHHHHHhh---HHHHHHHHHccccccC
Confidence 67899999999999 9999999999999764
No 23
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=5.1e-43 Score=295.12 Aligned_cols=227 Identities=24% Similarity=0.304 Sum_probs=209.6
Q ss_pred hhccccc-cCCCcHHHHHHHcCCHHHHHHHH--------HcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCcc
Q psy12892 11 EQLKATT-INGDTALHLAARKRDLDMVRILV--------DYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASI 81 (315)
Q Consensus 11 ~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~ 81 (315)
.+++.+| ..|.||||+|+..|+.+++++|+ +.|++++..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 115 ~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~ 194 (373)
T 2fo1_E 115 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTI 194 (373)
T ss_dssp TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcc
Confidence 3578888 79999999999999998888776 88999999999999999999999999999999999999998
Q ss_pred ccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC---CCcccCCCCCCcHHHHHHHcC---CHH
Q psy12892 82 TDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK---ANASITDHQDRTPMHLAAENG---HAS 155 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~~~~~l~~a~~~~---~~~ 155 (315)
.+. .|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..+ +.+
T Consensus 195 ~~~----------------------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~ 252 (373)
T 2fo1_E 195 YNK----------------------SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVA 252 (373)
T ss_dssp CCT----------------------TCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHH
T ss_pred cCC----------------------CCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHH
Confidence 776 7899999999999999999999988 789999999999999999998 899
Q ss_pred HHHHHHHhcCccccc--------cccCCccHHHHHHHcCcHHHHHHHHhcC-------CCCCCcHHHHHHHcCCHHHHHH
Q psy12892 156 IIELLADKFRASIFE--------RTKENYNVLHLAAMYSREDVVKLLLNKK-------GIENYNVLHLAAMYSREDVVKL 220 (315)
Q Consensus 156 ~~~~Ll~~~~~~~~~--------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-------~~~~~~~l~~A~~~~~~~~~~~ 220 (315)
++++|++. |++++. .+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+..|+.+++++
T Consensus 253 ~v~~Ll~~-g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~ 331 (373)
T 2fo1_E 253 SAKLLVEK-GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 331 (373)
T ss_dssp HHHHHHHH-TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHC-CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999997 888875 5668999999999999999999999765 6679999999999999999999
Q ss_pred HHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccc
Q psy12892 221 LLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGR 289 (315)
Q Consensus 221 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~ 289 (315)
|++ .|++++.+ +..|+||||+|+.. ++.+++++|+++|++
T Consensus 332 Ll~-~gad~~~~-------------------------d~~g~t~l~~A~~~---g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 332 LIQ-QGASVEAV-------------------------DATDHTARQLAQAN---NHHNIVDIFDRCRPE 371 (373)
T ss_dssp HHH-TTCCSSCC-------------------------CSSSCCHHHHHHHT---TCHHHHHHHHTTC--
T ss_pred HHH-cCCCccCC-------------------------CCCCCCHHHHHHHc---CCHHHHHHHHhcCcc
Confidence 999 99999985 67899999999999 999999999999875
No 24
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.3e-42 Score=270.56 Aligned_cols=229 Identities=25% Similarity=0.268 Sum_probs=209.1
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHH
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIA 92 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 92 (315)
++..|..|.|+|+.|+..|+++++++|++.|++++..+..|.||||+|+..|+.+++++|++++++++.....
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~------- 74 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGD------- 74 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT-------
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCC-------
Confidence 5667889999999999999999999999999999999999999999999999999999999999988766543
Q ss_pred hhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccc
Q psy12892 93 AAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERT 172 (315)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 172 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||.|+..|+.+++++|+++ +.+++..+
T Consensus 75 --------------~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-~~~~~~~~ 139 (240)
T 3eu9_A 75 --------------LNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAK-GQDVDMMD 139 (240)
T ss_dssp --------------TTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred --------------cCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhc-CCCccccC
Confidence 588999999999999999999999999999999999999999999999999999996 99999999
Q ss_pred cCCccHHHHHHHcCc-HHHHHHHHhcC------C-CCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccc
Q psy12892 173 KENYNVLHLAAMYSR-EDVVKLLLNKK------G-IENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLT 244 (315)
Q Consensus 173 ~~~~~~l~~a~~~~~-~~~~~~Ll~~~------~-~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~ 244 (315)
..|.|||++|+..++ .+++++|++.+ + ..|.||||.|+..++.+++++|++ .|++++..
T Consensus 140 ~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~------------ 206 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLE-AGANVDAQ------------ 206 (240)
T ss_dssp TTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCB------------
T ss_pred CCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCc------------
Confidence 999999999997665 78999999876 3 378899999999999999999999 89999885
Q ss_pred cchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceee
Q psy12892 245 VGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIR 292 (315)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~ 292 (315)
+..|.|||++|++. ++.+++++|+++|++...
T Consensus 207 -------------~~~g~t~l~~A~~~---~~~~~v~~L~~~~~~~~~ 238 (240)
T 3eu9_A 207 -------------NIKGESALDLAKQR---KNVWMINHLQEARQAKGY 238 (240)
T ss_dssp -------------CTTSCBHHHHHHHT---TCHHHHHHHHHHC-----
T ss_pred -------------CCCCCCHHHHHHHc---CcHHHHHHHHHhhhccCc
Confidence 67899999999999 999999999999887643
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.9e-42 Score=279.94 Aligned_cols=243 Identities=19% Similarity=0.186 Sum_probs=210.5
Q ss_pred hHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccc
Q psy12892 3 ELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASIT 82 (315)
Q Consensus 3 ~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~ 82 (315)
++|... +++.+|.+|.||||+|+..|+.+++++|+++|++++.. +|.||||+|+..|+.+++++|+++|++++..
T Consensus 17 ~lL~~~---~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 91 (285)
T 3kea_A 17 SFLSSK---DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQF 91 (285)
T ss_dssp HHHHST---TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCC
T ss_pred HHHHhC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 445443 58999999999999999999999999999999999877 4899999999999999999999999999987
Q ss_pred cccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCC-CcHHHHHHHcCCHHHHHHHH
Q psy12892 83 DHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQD-RTPMHLAAENGHASIIELLA 161 (315)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~Ll 161 (315)
+. .|.||||+|+..|+.+++++|++.|++++..+..| .||||+|+..|+.+++++|+
T Consensus 92 d~----------------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll 149 (285)
T 3kea_A 92 DD----------------------KGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL 149 (285)
T ss_dssp CT----------------------TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHH
T ss_pred CC----------------------CCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 76 79999999999999999999999999999999999 89999999999999999999
Q ss_pred HhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcH-HHHHHHcCCHHHHHHHHhccCCccccCCC
Q psy12892 162 DKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNV-LHLAAMYSREDVVKLLLNKKGINVAALGG 234 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~-l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~ 234 (315)
++ +.+.... ..|.||||+|+..|+.+++++|++.+ +..|.|| ||+|+..++.+++++|++ +|++++..+
T Consensus 150 ~~-g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~-~gad~~~~~- 225 (285)
T 3kea_A 150 SE-IPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFK-YDINIYSAN- 225 (285)
T ss_dssp TT-SCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTT-SCBCSTTTT-
T ss_pred hC-CCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCC-
Confidence 97 6655222 27899999999999999999999876 6678887 999999999999999999 999998852
Q ss_pred CCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhh
Q psy12892 235 EDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQI 312 (315)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 312 (315)
+.|+.. ++.+++++|+++|++++..... ..+..+......++
T Consensus 226 -------------------------------~~a~~~---~~~~iv~~Ll~~g~~~~~~~~~--~~~~~~~~~~~~~i 267 (285)
T 3kea_A 226 -------------------------------LENVLL---DDAEIAKMIIEKHVEYKSDSYT--KDLDIVKNNKLDEI 267 (285)
T ss_dssp -------------------------------GGGGTT---TCHHHHHHHHHHHHHHTTCTTT--TTCHHHHTCSHHHH
T ss_pred -------------------------------hhhhhc---CCHHHHHHHHHcCCCCCCcccc--chHHHHhhhhHHHH
Confidence 245667 9999999999999998754432 23444444433333
No 26
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=277.66 Aligned_cols=226 Identities=23% Similarity=0.287 Sum_probs=172.0
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHcCCc--------ccccCCCCChHHHHHHhcCCH-HHHHHHHhccCCCccccc
Q psy12892 14 KATTINGDTALHLAARKRDLDMVRILVDYGTS--------VDIQNGEGQTALHIASAEGDE-ALVKYFYGAKANASITDH 84 (315)
Q Consensus 14 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--------~~~~~~~g~t~l~~A~~~~~~-~~v~~Ll~~~~~~~~~~~ 84 (315)
..+|..+.++|+.||..|++++|++|++.|++ ++..+..+.|||+.|+..++. .++++|++.|++++..+.
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~ 84 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQ 84 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCT
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCC
Confidence 45677888999999999999999999999875 456677899999999988765 588999999999998876
Q ss_pred cchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q psy12892 85 QGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKF 164 (315)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 164 (315)
.|.||||+|+..|+.+++++|++.+++++..+..|.||++.|+..++.+++++|++.
T Consensus 85 ----------------------~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~- 141 (269)
T 4b93_B 85 ----------------------DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDS- 141 (269)
T ss_dssp ----------------------TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-
T ss_pred ----------------------CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHC-
Confidence 799999999999999999999999999999999999999999999999999999996
Q ss_pred CccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCC
Q psy12892 165 RASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLT 238 (315)
Q Consensus 165 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 238 (315)
|++++..+..|.||||+|+..|+.+++++|++.| +..|.||||+|+..|+.+++++|++ .|+|++.+
T Consensus 142 g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad~~~~------ 214 (269)
T 4b93_B 142 NAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLL-HGASVQVL------ 214 (269)
T ss_dssp TCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCSCCC------
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHH-CCCCCCCc------
Confidence 9999999999999999999999999999999887 6678999999999999999999999 99999985
Q ss_pred CCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCc-HHHHHHHHhhcccee
Q psy12892 239 GRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTA-TSILRALLSTAGREI 291 (315)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~-~~~i~~Ll~~g~~~~ 291 (315)
+..|+||||+|+++ +. .+++++|.+.++.++
T Consensus 215 -------------------d~~G~TpL~~A~~~---~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 215 -------------------NKRQRTAVDCAEQN---SKIMELLQVVPSCVASLD 246 (269)
T ss_dssp -------------------CTTSCCSGGGSCTT---CHHHHHTTC---------
T ss_pred -------------------CCCCCCHHHHHHhC---CcHHHHHHHHHHhchhhh
Confidence 67899999999988 75 456666666665543
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=272.37 Aligned_cols=204 Identities=19% Similarity=0.173 Sum_probs=190.1
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
+|+||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++.|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~g~~~~v~~Ll~~g 59 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITA----------------------DHVSPLHEACLGGHLSCVKILLKHG 59 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT----------------------TCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC----------------------CCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 588999999999999999999999999998876 7999999999999999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcH
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNV 205 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~ 205 (315)
++++..+..|.||||+|+..|+.+++++|++. +++++. +..+.||||+|+..|+.+++++|++.+ +..|.||
T Consensus 60 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 137 (261)
T 2xai_A 60 AQVNGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTP 137 (261)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCH
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCH
Confidence 99999999999999999999999999999996 888875 445899999999999999999999887 5678899
Q ss_pred HHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHh
Q psy12892 206 LHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLS 285 (315)
Q Consensus 206 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~ 285 (315)
||.|+..++.+++++|++ .|++++. +..|.||||+|+.. ++.+++++|++
T Consensus 138 L~~A~~~~~~~~v~~Ll~-~g~~~~~--------------------------~~~g~t~Lh~A~~~---~~~~~v~~Ll~ 187 (261)
T 2xai_A 138 LYLACENQQRACVKKLLE-SGADVNQ--------------------------GKGQDSPLHAVART---ASEELACLLMD 187 (261)
T ss_dssp HHHHHHTTCHHHHHHHHH-HTCCTTC--------------------------CBTTBCHHHHHHHH---TCHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHH-cCCCCCC--------------------------CCCCCChHHHHHHc---CCHHHHHHHHH
Confidence 999999999999999999 9999985 56789999999999 99999999999
Q ss_pred hccceeeeccCCceeEEEeecCch
Q psy12892 286 TAGREIRMTVDGTLILYYRGKDSK 309 (315)
Q Consensus 286 ~g~~~~~~~~~g~t~l~~A~~~~~ 309 (315)
+|+|++.+|..|.||+++|++.+.
T Consensus 188 ~gad~~~~d~~g~tpl~~A~~~~~ 211 (261)
T 2xai_A 188 FGADTQAKNAEGKRPVELVPPESP 211 (261)
T ss_dssp TTCCTTCCCTTSCCGGGGSCTTCT
T ss_pred cCCCCCCcCCCCCChhhhcccccc
Confidence 999999999999999999997664
No 28
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.4e-40 Score=260.50 Aligned_cols=216 Identities=21% Similarity=0.266 Sum_probs=194.2
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCcccc-cCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 20 GDTALHLAARKRDLDMVRILVDYGTSVDI-QNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 20 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
|.||||+||..|+.+++++|++.|.++.. .+..|.||||+|+..|+.+++++|+++|++++.....
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~------------- 68 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP------------- 68 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCC-------------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccC-------------
Confidence 78999999999999999999999988654 7899999999999999999999999999555443311
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC--CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCc
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAK--ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENY 176 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 176 (315)
+..|.||||+|+..|+.+++++|++.| .+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.
T Consensus 69 ------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~ 141 (228)
T 2dzn_A 69 ------DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQ 141 (228)
T ss_dssp ------CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSC
T ss_pred ------CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCC
Confidence 117999999999999999999999998 88889999999999999999999999999997 999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhcC-------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhh
Q psy12892 177 NVLHLAAMYSREDVVKLLLNKK-------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQ 249 (315)
Q Consensus 177 ~~l~~a~~~~~~~~~~~Ll~~~-------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (315)
||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++..|++++..
T Consensus 142 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~----------------- 204 (228)
T 2dzn_A 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLV----------------- 204 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCB-----------------
T ss_pred CHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCcc-----------------
Confidence 9999999999999999999887 6679999999999999999999994399999985
Q ss_pred hhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhh
Q psy12892 250 AYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLST 286 (315)
Q Consensus 250 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~ 286 (315)
+..|.|||++|+.. +++++|+++
T Consensus 205 --------~~~g~t~l~~A~~~------~~~~~l~~~ 227 (228)
T 2dzn_A 205 --------DNKGAKAEDVALNE------QVKKFFLNN 227 (228)
T ss_dssp --------CTTSCBGGGGCSST------THHHHHHTT
T ss_pred --------CCCCCcHHHHHHHH------HHHHHHHhc
Confidence 77899999999887 566777664
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-42 Score=274.53 Aligned_cols=223 Identities=21% Similarity=0.211 Sum_probs=172.5
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCH-HHHHH
Q psy12892 48 IQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDE-ALVKY 126 (315)
Q Consensus 48 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~v~~ 126 (315)
.+|..+.++|+.|+..|+.++|++|++.+++......... ...+..+.+||+.|+..+.. .+++.
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~--------------~~~~~~~~t~L~~a~~~~~~~~~v~~ 71 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTV--------------SAADPEFCHPLCQCPKCAPAQKRLAK 71 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccc--------------cccCccCCCHHHHHHHhCCHHHHHHH
Confidence 3566778999999999999999999999876432211100 01112688999999988765 58899
Q ss_pred HHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CC
Q psy12892 127 FYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GI 200 (315)
Q Consensus 127 Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~ 200 (315)
|++.|++++..+..|.||||+|+..|+.+++++|++. +++++..+..|.||+++|+..++.+++++|++.+ +.
T Consensus 72 Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~ 150 (269)
T 4b93_B 72 VPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL 150 (269)
T ss_dssp ---CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC
Confidence 9999999999999999999999999999999999996 9999999999999999999999999999999887 67
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHH
Q psy12892 201 ENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSIL 280 (315)
Q Consensus 201 ~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i 280 (315)
.|.||||+|+..|+.+++++|++ .|++++.. +..|+||||+|+.. |+.+++
T Consensus 151 ~g~TpL~~A~~~g~~~~v~~Ll~-~gadvn~~-------------------------~~~g~t~Lh~A~~~---g~~~~v 201 (269)
T 4b93_B 151 SGNTPLIYACSGGHHELVALLLQ-HGASINAS-------------------------NNKGNTALHEAVIE---KHVFVV 201 (269)
T ss_dssp TCCCHHHHHHHTTCGGGHHHHHH-TTCCTTCB-------------------------CTTSCBHHHHHHHT---TCHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH-CCCCCCcc-------------------------ccCCCcHHHHHHHc---CCHHHH
Confidence 79999999999999999999999 99999985 67899999999999 999999
Q ss_pred HHHHhhccceeeeccCCceeEEEeecCch-hhhhc
Q psy12892 281 RALLSTAGREIRMTVDGTLILYYRGKDSK-AQIEE 314 (315)
Q Consensus 281 ~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~-~~~~~ 314 (315)
++|+++|+|++.+|..|+|||++|+++++ .++++
T Consensus 202 ~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~ 236 (269)
T 4b93_B 202 ELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQ 236 (269)
T ss_dssp HHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTT
T ss_pred HHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHH
Confidence 99999999999999999999999999887 45544
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.9e-41 Score=264.48 Aligned_cols=214 Identities=20% Similarity=0.220 Sum_probs=198.5
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCC-ccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHH
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANA-SITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFY 128 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll 128 (315)
+..+.+|||.|+..|+.+++++|++.+... +..+. .|.||||+|+..|+.+++++|+
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~----------------------~g~t~L~~A~~~g~~~~v~~Ll 60 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQ----------------------DSRTALHWACSAGHTEIVEFLL 60 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCT----------------------TSCCHHHHHHHHTCHHHHHHHH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCC----------------------CCCCHHHHHHHcCcHHHHHHHH
Confidence 456789999999999999999999877543 33333 7999999999999999999999
Q ss_pred hCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCC
Q psy12892 129 GAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIEN 202 (315)
Q Consensus 129 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~ 202 (315)
+.|.+++..+..|.||||+|+..|+.+++++|+++ +.+++..+..|.||||+|+..++.+++++|++.+ +..|
T Consensus 61 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 139 (231)
T 3aji_A 61 QLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYD 139 (231)
T ss_dssp HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 99999999999999999999999999999999996 9999999999999999999999999999999876 5678
Q ss_pred CcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHH
Q psy12892 203 YNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRA 282 (315)
Q Consensus 203 ~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~ 282 (315)
.||||.|+..++.+++++|++ .|++++.+ +..|+||||+|+.. ++.+++++
T Consensus 140 ~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-------------------------~~~g~t~L~~A~~~---~~~~~v~~ 190 (231)
T 3aji_A 140 ATAMHRAAAKGNLKMVHILLF-YKASTNIQ-------------------------DTEGNTPLHLACDE---ERVEEAKF 190 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-TTCCSCCC-------------------------CTTSCCHHHHHHHT---TCHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHh-cCCCcccc-------------------------CCCCCCHHHHHHHC---CCHHHHHH
Confidence 999999999999999999999 99999985 67899999999999 99999999
Q ss_pred HHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 283 LLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 283 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
|+++|++++.+|..|.||+++|++.++.+++++
T Consensus 191 Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~l 223 (231)
T 3aji_A 191 LVTQGASIYIENKEEKTPLQVAKGGLGLILKRL 223 (231)
T ss_dssp HHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHH
Confidence 999999999999999999999999999998763
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2e-41 Score=274.98 Aligned_cols=225 Identities=17% Similarity=0.166 Sum_probs=201.5
Q ss_pred HcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCC
Q psy12892 29 RKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEG 108 (315)
Q Consensus 29 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (315)
+..+.+-+..|+..+ +++..|..|.||||+|+..|+.+++++|+++|++++.. .|
T Consensus 8 ~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------------------------~g 62 (285)
T 3kea_A 8 NTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL------------------------EN 62 (285)
T ss_dssp GGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC------------------------TT
T ss_pred HhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC------------------------CC
Confidence 344444444444444 57889999999999999999999999999999987765 37
Q ss_pred ChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCC-ccHHHHHHHcCc
Q psy12892 109 QTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKEN-YNVLHLAAMYSR 187 (315)
Q Consensus 109 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~~l~~a~~~~~ 187 (315)
.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..| .||||+|+..|+
T Consensus 63 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~ 141 (285)
T 3kea_A 63 EFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLND 141 (285)
T ss_dssp CCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCC
Confidence 8999999999999999999999999999999999999999999999999999997 99999999999 799999999999
Q ss_pred HHHHHHHHhcC----CC-CCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcC
Q psy12892 188 EDVVKLLLNKK----GI-ENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQ 262 (315)
Q Consensus 188 ~~~~~~Ll~~~----~~-~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (315)
.+++++|++.+ +. .|.||||.|+..++.+++++|++ .|++++.. +..|+
T Consensus 142 ~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad~n~~-------------------------~~~g~ 195 (285)
T 3kea_A 142 VSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLD-YMTSTNTN-------------------------NSLLF 195 (285)
T ss_dssp HHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHH-HHHHTCTT-------------------------CCCBC
T ss_pred HHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHH-cCCCCCcc-------------------------cCCCC
Confidence 99999999987 22 67899999999999999999999 89999984 67788
Q ss_pred Cc-ceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 263 TA-VHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 263 t~-L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
|| ||+|+.. ++.+++++|+++|++++.+|. .|+..|+.+++++
T Consensus 196 t~~L~~A~~~---~~~~~v~~Ll~~gad~~~~~~-------~a~~~~~~~iv~~ 239 (285)
T 3kea_A 196 IPDIKLAIDN---KDIEMLQALFKYDINIYSANL-------ENVLLDDAEIAKM 239 (285)
T ss_dssp CTTHHHHHHH---TCHHHHHHHTTSCBCSTTTTG-------GGGTTTCHHHHHH
T ss_pred ChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCh-------hhhhcCCHHHHHH
Confidence 87 9999999 999999999999999998884 5677899998864
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=3.1e-40 Score=259.88 Aligned_cols=209 Identities=18% Similarity=0.173 Sum_probs=191.8
Q ss_pred CChHHHHHHhcCCHHHHHHHHhccCCCcc-ccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 53 GQTALHIASAEGDEALVKYFYGAKANASI-TDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 53 g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
|.||||+|+..|+.+++++|++.+++... .+. .|.||||+|+..|+.+++++|++.+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~~~ 59 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQ----------------------DGRIPLHWSVSFQAHEITSFLLSKM 59 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCC----------------------CCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 78999999999999999999999887654 333 7999999999999999999999999
Q ss_pred --CCccc-CCCCCCcHHHHHHHcCCHHHHHHHHHhcC--ccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CC
Q psy12892 132 --ANASI-TDHQDRTPMHLAAENGHASIIELLADKFR--ASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GI 200 (315)
Q Consensus 132 --~~~~~-~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~--~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~ 200 (315)
.+++. .+..|.||||+|+..|+.+++++|+++ + .+++..+..|.||||+|+..++.+++++|++.+ +.
T Consensus 60 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 138 (228)
T 2dzn_A 60 ENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK 138 (228)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred ccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCC
Confidence 55655 788999999999999999999999996 6 888999999999999999999999999999887 66
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccC-CccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHH
Q psy12892 201 ENYNVLHLAAMYSREDVVKLLLNKKG-INVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSI 279 (315)
Q Consensus 201 ~~~~~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~ 279 (315)
.|.||||.|+..++.+++++|++ .| .+++.. +..|+||||+|+.. ++.++
T Consensus 139 ~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~-------------------------d~~g~t~L~~A~~~---~~~~~ 189 (228)
T 2dzn_A 139 FNQIPLHRAASVGSLKLIELLCG-LGKSAVNWQ-------------------------DKQGWTPLFHALAE---GHGDA 189 (228)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHT-TTCCCSCCC-------------------------CTTSCCHHHHHHHT---TCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCcccccCc-------------------------CCCCCCHHHHHHHc---CCHHH
Confidence 79999999999999999999999 77 899884 67899999999999 99999
Q ss_pred HHHHH-hhccceeeeccCCceeEEEeecCchhhhh
Q psy12892 280 LRALL-STAGREIRMTVDGTLILYYRGKDSKAQIE 313 (315)
Q Consensus 280 i~~Ll-~~g~~~~~~~~~g~t~l~~A~~~~~~~~~ 313 (315)
+++|+ ++|+|++.+|..|.||+++|++.+..+++
T Consensus 190 v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~~~l 224 (228)
T 2dzn_A 190 AVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKKFF 224 (228)
T ss_dssp HHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHHHHH
T ss_pred HHHHHHhcCCCCCccCCCCCcHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999998877765
No 33
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2.8e-40 Score=278.05 Aligned_cols=265 Identities=21% Similarity=0.158 Sum_probs=217.3
Q ss_pred hhHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhc----cC
Q psy12892 2 WELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGA----KA 77 (315)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~----~~ 77 (315)
+++|++++ .+++.+|..|.||||+|+..|+.+++++|+++|++++. ..|.||||+|+..|+.+++++|+++ ++
T Consensus 36 v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 112 (364)
T 3ljn_A 36 VRRLIETG-VSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQ 112 (364)
T ss_dssp HHHHHHTT-CCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcC-CCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCC
Confidence 56777775 46999999999999999999999999999999997653 5789999999999999999999998 66
Q ss_pred CCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcC--CHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHH
Q psy12892 78 NASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEG--DEALVKYFYGAKANASITDHQDRTPMHLAAENGHAS 155 (315)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~ 155 (315)
+++........... ........+..|.||||+|+..| +.+++++|++.|++++..+..|.||||+|+..|+.+
T Consensus 113 ~~~~~~~~~~~~~~-----~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 113 MPESLLNECDEREV-----NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNRE 187 (364)
T ss_dssp CHHHHHTCCCCCCE-----EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHhhcchHhh-----hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 65541000000000 00000011237999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcc-----ccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy12892 156 IIELLADKFRAS-----IFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNK 224 (315)
Q Consensus 156 ~~~~Ll~~~~~~-----~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~ 224 (315)
++++|++. +.+ ++..+..|.||||+|+..|+.+++++|++.+ +..|.||||+|+..++.+++++|++
T Consensus 188 ~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~- 265 (364)
T 3ljn_A 188 ALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ- 265 (364)
T ss_dssp HHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH-
T ss_pred HHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH-
Confidence 99999996 777 9999999999999999999999999999987 6789999999999999999999999
Q ss_pred cCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceee
Q psy12892 225 KGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIR 292 (315)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~ 292 (315)
.|.+++..+.....+.... .+..++||++.|+.. +..+.+..|+..+++...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~aa~~---~~~~~v~~ll~~~~~~~~ 317 (364)
T 3ljn_A 266 KTDVFLIQACPYHNGTTVL-------------PDRVVWLDFVPAAAD---PSKQEVLQLLQEKLDEVV 317 (364)
T ss_dssp HSCHHHHHTCTTBSSSSBC-------------GGGCCCCTTSCSSCC---HHHHHHHHHHHHHHHHHH
T ss_pred cCCchhhhcCcccCccccc-------------ccccccccchhhhhc---cCHHHHHHHHHHHHHHHh
Confidence 8888765442222222221 267789999999999 988888889888877643
No 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.5e-39 Score=252.36 Aligned_cols=207 Identities=23% Similarity=0.266 Sum_probs=191.8
Q ss_pred ChhHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccC-CC
Q psy12892 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKA-NA 79 (315)
Q Consensus 1 ~~~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~-~~ 79 (315)
++++|++++....+.+|.+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++++ ++
T Consensus 6 ~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~ 85 (223)
T 2f8y_A 6 VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 85 (223)
T ss_dssp CEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCT
T ss_pred HHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 45677777776555668999999999999999999999999999999999999999999999999999999999987 66
Q ss_pred ccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHH
Q psy12892 80 SITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIEL 159 (315)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ 159 (315)
+..+. .|.||||+|+..++.+++++|++.|.+++..+..|.||||+|+..|+.+++++
T Consensus 86 ~~~~~----------------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 143 (223)
T 2f8y_A 86 DARMH----------------------DGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVV 143 (223)
T ss_dssp TCCCT----------------------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred ccCCC----------------------CCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHH
Confidence 66655 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCcccc
Q psy12892 160 LADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAA 231 (315)
Q Consensus 160 Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 231 (315)
|++. |++++..+..|.||||+|+..++.+++++|++.+ +..|.||+++|+..++.+++++|++ +|+....
T Consensus 144 Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~-~g~~~~~ 219 (223)
T 2f8y_A 144 LLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDE-YNLVRSP 219 (223)
T ss_dssp HHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCSSCC
T ss_pred HHHc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHH-cCCCccc
Confidence 9997 9999999999999999999999999999999987 5678999999999999999999999 8887543
No 35
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-41 Score=280.90 Aligned_cols=242 Identities=15% Similarity=0.114 Sum_probs=197.1
Q ss_pred hhHhhhhchhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCccccc-----------------CCCCChHHHHHHhcC
Q psy12892 2 WELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQ-----------------NGEGQTALHIASAEG 64 (315)
Q Consensus 2 ~~~l~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-----------------~~~g~t~l~~A~~~~ 64 (315)
.++|++++. +++.++..|.|+++ |+.++++.|+++|++++.. .....+.+|.|+..+
T Consensus 35 v~~ll~~ga-~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~ 108 (327)
T 1sw6_A 35 TSDFLSSPL-KIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSL 108 (327)
T ss_dssp CCSTTTSSC-CCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHH
T ss_pred HHHHhhCCc-ccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhh
Confidence 456666654 58999999999987 8999999999999876541 111123357788888
Q ss_pred CHHHHHHHHhccCCCcc-ccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCc
Q psy12892 65 DEALVKYFYGAKANASI-TDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRT 143 (315)
Q Consensus 65 ~~~~v~~Ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 143 (315)
..+++++|++.|++++. .+. .|.||||+|+..|+.+++++|++.|++++..+..|.|
T Consensus 109 ~~~~~~~l~~~g~dvn~~~d~----------------------~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~T 166 (327)
T 1sw6_A 109 LQEVNDAFPNTQLNLNIPVDE----------------------HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGES 166 (327)
T ss_dssp HHHHHHHCTTSCCCSCSCCST----------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCC
T ss_pred HHHHHHHHHhcCCCcccccCC----------------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 88999999999999988 565 7999999999999999999999999999999999999
Q ss_pred HHHHHHHcCC---HHHHHHHHHhcCccccccccCCccHHHHHHH----cCcHHHHHHHHhc-------------------
Q psy12892 144 PMHLAAENGH---ASIIELLADKFRASIFERTKENYNVLHLAAM----YSREDVVKLLLNK------------------- 197 (315)
Q Consensus 144 ~l~~a~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~------------------- 197 (315)
|||+|+..|+ .++++.|++....+++..+..|+||||+|+. .|+.+++++|++.
T Consensus 167 pLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~ 246 (327)
T 1sw6_A 167 CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNE 246 (327)
T ss_dssp HHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC---
T ss_pred HHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhc
Confidence 9999999998 6888888887557899999999999999999 8999999999865
Q ss_pred -C------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeec
Q psy12892 198 -K------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCS 270 (315)
Q Consensus 198 -~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~ 270 (315)
+ +..|.||||.|+. +++|++ . +++.+ +..|+||||+|+.
T Consensus 247 ~g~~~~~~~~~g~t~L~~a~~------~~~Ll~-~--~~n~~-------------------------d~~G~TpLh~A~~ 292 (327)
T 1sw6_A 247 KESKPNDKNGERKDSILENLD------LKWIIA-N--MLNAQ-------------------------DSNGDTCLNIAAR 292 (327)
T ss_dssp -------------CHHHHHCS------HHHHHH-H--TTTCC-------------------------CTTSCCHHHHHHH
T ss_pred ccCCcccccccCCChhHHHHH------HHHHHH-h--CCCCC-------------------------CCCCCCHHHHHHH
Confidence 2 5678899999985 899998 5 46653 6789999999999
Q ss_pred cCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCc
Q psy12892 271 RQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDS 308 (315)
Q Consensus 271 ~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 308 (315)
. ++.+++++|+++|+|++.+|..|.|||++|+++|
T Consensus 293 ~---g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 293 L---GNISIVDALLDYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp H---CCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred c---CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 9 9999999999999999999999999999999876
No 36
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-39 Score=255.71 Aligned_cols=209 Identities=23% Similarity=0.247 Sum_probs=193.7
Q ss_pred CCHHHHHHHHHcCCccccc-CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCC
Q psy12892 31 RDLDMVRILVDYGTSVDIQ-NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQ 109 (315)
Q Consensus 31 ~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (315)
|+.+++++|+++|++++.. |..|.||||+|+..|+.+++++|+++|++++..+. .|.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~ 59 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN----------------------MGR 59 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------------TSC
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------------CCC
Confidence 6788999999999998865 88999999999999999999999999999988776 789
Q ss_pred hHHHHHHhcCCHHHHHHHHhCCC-CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcH
Q psy12892 110 TALHIASAEGDEALVKYFYGAKA-NASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSRE 188 (315)
Q Consensus 110 ~~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~ 188 (315)
||||+|+..++.+++++|++.+. +++..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..++.
T Consensus 60 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 60 TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp CHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcCCH
Confidence 99999999999999999999887 8888899999999999999999999999996 999999999999999999999999
Q ss_pred HHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcC
Q psy12892 189 DVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQ 262 (315)
Q Consensus 189 ~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (315)
+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+ +..|.
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~~g~ 192 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD-HFANRDIT-------------------------DHMDR 192 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCC-------------------------CTTCC
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCccc-------------------------cccCC
Confidence 9999999887 5678999999999999999999999 99999885 67789
Q ss_pred CcceeeeccCCCCcHHHHHHHHhhcccee
Q psy12892 263 TAVHLVCSRQTGTATSILRALLSTAGREI 291 (315)
Q Consensus 263 t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~ 291 (315)
|||++|++. ++.+++++|+++|+...
T Consensus 193 t~l~~A~~~---~~~~i~~~L~~~g~~~~ 218 (223)
T 2f8y_A 193 LPRDIAQER---MHHDIVRLLDEYNLVRS 218 (223)
T ss_dssp CHHHHHHHT---TCHHHHHHHHHTTCSSC
T ss_pred CHHHHHHHh---cchHHHHHHHHcCCCcc
Confidence 999999999 99999999999998654
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.2e-40 Score=259.45 Aligned_cols=218 Identities=24% Similarity=0.284 Sum_probs=180.5
Q ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHcCC----cccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhh
Q psy12892 14 KATTINGDTALHLAARKRDLDMVRILVDYGT----SVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 14 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
+.+|.+|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----- 76 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF----- 76 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-----
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-----
Confidence 4578899999999999999999999998765 6888999999999999999999999999999999988776
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCC------cccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKAN------ASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
.|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.
T Consensus 77 -----------------~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 139 (236)
T 1ikn_D 77 -----------------RGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSL 139 (236)
T ss_dssp -----------------TCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH
T ss_pred -----------------CCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 789999999999999999999998875 455677888899999998888899888886
Q ss_pred cCccccccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCcc
Q psy12892 164 FRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDL 243 (315)
Q Consensus 164 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~ 243 (315)
|++++..+. ..|.||||+|+..++.+++++|++ .|++++..
T Consensus 140 -g~~~~~~~~--------------------------~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~----------- 180 (236)
T 1ikn_D 140 -GADVNAQEP--------------------------CNGRTALHLAVDLQNPDLVSLLLK-CGADVNRV----------- 180 (236)
T ss_dssp -TCCTTCCCT--------------------------TTCCCHHHHHHHTTCHHHHHHHHT-TTCCSCCC-----------
T ss_pred -CCCCCCCCC--------------------------CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcc-----------
Confidence 777765543 146677777777778888999998 89999885
Q ss_pred ccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhcccee--eeccCCceeEEEeecCch
Q psy12892 244 TVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREI--RMTVDGTLILYYRGKDSK 309 (315)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~--~~~~~g~t~l~~A~~~~~ 309 (315)
+..|.||||+|+.. ++.+++++|+++|+++. .++..|.||.+.+.....
T Consensus 181 --------------~~~g~tpl~~A~~~---~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 181 --------------TYQGYSPYQLTWGR---PSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp --------------CTTCCCGGGGCTTS---SCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-----
T ss_pred --------------cCCCCCHHHHHHcc---CchHHHHHHHHcchhhhhcCCccchHHHHhhhccccc
Confidence 67899999999999 99999999999999887 889999999998876544
No 38
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=258.46 Aligned_cols=219 Identities=21% Similarity=0.221 Sum_probs=201.3
Q ss_pred ccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHH
Q psy12892 46 VDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVK 125 (315)
Q Consensus 46 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~ 125 (315)
++..|..|.++|+.|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.++++
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~ 59 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDK----------------------ENVTLLHWAAINNRIDLVK 59 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCC----------------------CCCCHHHHHHHhCCHHHHH
Confidence 445678899999999999999999999999999988776 7899999999999999999
Q ss_pred HHHhCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------
Q psy12892 126 YFYGAKANASITD-HQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------ 198 (315)
Q Consensus 126 ~Ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------ 198 (315)
+|++.+.+++... ..|.|||++|+..|+.+++++|++. +.+++..+..+.|||++|+..++.+++++|++.+
T Consensus 60 ~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~ 138 (240)
T 3eu9_A 60 YYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY-GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMM 138 (240)
T ss_dssp HHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCcccc
Confidence 9999999887655 4499999999999999999999996 9999999999999999999999999999999876
Q ss_pred CCCCCcHHHHHHHcCC-HHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcH
Q psy12892 199 GIENYNVLHLAAMYSR-EDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTAT 277 (315)
Q Consensus 199 ~~~~~~~l~~A~~~~~-~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~ 277 (315)
+..|.||||.|+..++ .+++++|++ .|++++..+ ...|.||||+|+.. ++.
T Consensus 139 ~~~g~t~l~~a~~~~~~~~~~~~L~~-~~~~~~~~~------------------------~~~g~t~L~~A~~~---~~~ 190 (240)
T 3eu9_A 139 DQNGMTPLMWAAYRTHSVDPTRLLLT-FNVSVNLGD------------------------KYHKNTALHWAVLA---GNT 190 (240)
T ss_dssp CTTSCCHHHHHHHHCCSSTTHHHHHH-TTCCTTCCC------------------------TTTCCCHHHHHHHH---TCH
T ss_pred CCCCCcHHHHHHHhCChHHHHHHHHh-cCCCcchhh------------------------ccCCCcHHHHHHHc---CCH
Confidence 6678999999997665 899999999 999999852 23788999999999 999
Q ss_pred HHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 278 SILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 278 ~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
+++++|+++|++++.+|..|.|||++|++.|+.+++++
T Consensus 191 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 228 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINH 228 (240)
T ss_dssp HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999999999999999999999999999874
No 39
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.1e-38 Score=258.93 Aligned_cols=219 Identities=22% Similarity=0.287 Sum_probs=175.8
Q ss_pred ccccCCCCChHHHHHHhcCCHHHHHHHHhccCC---CccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHH
Q psy12892 46 VDIQNGEGQTALHIASAEGDEALVKYFYGAKAN---ASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEA 122 (315)
Q Consensus 46 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~ 122 (315)
++..|..|.||||+|+..|+.+++++|+++|++ ++..+. .|.||||+|+..|+.+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~----------------------~g~t~L~~A~~~g~~~ 59 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQND----------------------LGQTALHLAAILGEAS 59 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCT----------------------TSCCHHHHHHHHTCHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCC----------------------CCCCHHHHHHHcCCHH
Confidence 356789999999999999999999999999998 444444 7999999999999999
Q ss_pred HHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccc-------------cccCCccHHHHHHHcCcHH
Q psy12892 123 LVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFE-------------RTKENYNVLHLAAMYSRED 189 (315)
Q Consensus 123 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~-------------~~~~~~~~l~~a~~~~~~~ 189 (315)
++++|++.|++++..+..|.||||+|+..|+.+++++|+++ +..... ....+.++++.++..+...
T Consensus 60 ~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (282)
T 1oy3_D 60 TVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQP-RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPEN 138 (282)
T ss_dssp HHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSS-CCSSCCCC------------------------------
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhcc-CCCCchhhHHHHhhcccccCcchhcchhhhccccccch
Confidence 99999999999999999999999999999999999999986 544321 1122345555555544333
Q ss_pred HHHHH-------HhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcC
Q psy12892 190 VVKLL-------LNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQ 262 (315)
Q Consensus 190 ~~~~L-------l~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (315)
....+ ++..+..|.||||.|+..++.+++++|++ .|++++..+ +..|+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~------------------------~~~g~ 193 (282)
T 1oy3_D 139 EEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRD-AGADLNKPE------------------------PTCGR 193 (282)
T ss_dssp -----CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCC------------------------TTTCC
T ss_pred hhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCCCCC------------------------CCCCc
Confidence 33222 23347789999999999999999999999 999999852 34599
Q ss_pred CcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 263 TAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 263 t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
||||+|+.. ++.+++++|+++|++++.+|..|.|||++|+++|+.+++++
T Consensus 194 tpL~~A~~~---~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 243 (282)
T 1oy3_D 194 TPLHLAVEA---QAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243 (282)
T ss_dssp CHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHH
T ss_pred CHHHHHHHc---CCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHH
Confidence 999999999 99999999999999999999999999999999999999874
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=5.9e-37 Score=241.73 Aligned_cols=194 Identities=26% Similarity=0.322 Sum_probs=173.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDY-GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTS 97 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 97 (315)
.|.||||+|+..|+.+++++|++. |++++..|..|.||||+|+..|+.+++++|+++|+++......
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~------------ 69 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMT------------ 69 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCC------------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccccc------------
Confidence 689999999999999999999998 9999999999999999999999999999999999876322110
Q ss_pred hHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCC-------------CCCcHHHHHHHcCCHHHHHHHHHhc
Q psy12892 98 VLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDH-------------QDRTPMHLAAENGHASIIELLADKF 164 (315)
Q Consensus 98 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~~Ll~~~ 164 (315)
..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++
T Consensus 70 -----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~- 143 (232)
T 2rfa_A 70 -----SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH- 143 (232)
T ss_dssp -----STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-
T ss_pred -----ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-
Confidence 0011689999999999999999999999999988765 799999999999999999999996
Q ss_pred CccccccccCCccHHHHHHHcCcHHHH----HHHHhcC------------CCCCCcHHHHHHHcCCHHHHHHHHhccCCc
Q psy12892 165 RASIFERTKENYNVLHLAAMYSREDVV----KLLLNKK------------GIENYNVLHLAAMYSREDVVKLLLNKKGIN 228 (315)
Q Consensus 165 ~~~~~~~~~~~~~~l~~a~~~~~~~~~----~~Ll~~~------------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~ 228 (315)
|++++..+..|.||||+|+..++.+++ ++|++.+ +..|.||||+|+..++.+++++|++ +|.+
T Consensus 144 ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~-~g~~ 222 (232)
T 2rfa_A 144 GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ-KRKH 222 (232)
T ss_dssp TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHH-HHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHh-cCcc
Confidence 999999999999999999999999988 8888765 4578999999999999999999999 7766
Q ss_pred ccc
Q psy12892 229 VAA 231 (315)
Q Consensus 229 ~~~ 231 (315)
...
T Consensus 223 ~~~ 225 (232)
T 2rfa_A 223 IAA 225 (232)
T ss_dssp C--
T ss_pred chh
Confidence 554
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.7e-37 Score=247.27 Aligned_cols=214 Identities=17% Similarity=0.143 Sum_probs=173.6
Q ss_pred CCCcHHHHHHHcCCHH----HHHHHHHcCCcccc----cCCCCChHHHHHHhc---CCHHHHHHHHhccCCCccccccch
Q psy12892 19 NGDTALHLAARKRDLD----MVRILVDYGTSVDI----QNGEGQTALHIASAE---GDEALVKYFYGAKANASITDHQGI 87 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~~~----~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~ 87 (315)
.|+||||.||..|+.+ ++++|++.|++++. .|..|.||||+|+.. |+.+++++|+++|++++.....-
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~- 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV- 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG-
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc-
Confidence 4899999999999997 66777789999998 899999999999999 99999999999998776433100
Q ss_pred hhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCC-------------CCcHHHHHHHcCCH
Q psy12892 88 QRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQ-------------DRTPMHLAAENGHA 154 (315)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~~~~l~~a~~~~~~ 154 (315)
.. .....+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.
T Consensus 80 ~~----------~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 80 NA----------QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp GC----------CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred cc----------ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCH
Confidence 00 00000126999999999999999999999999999998876 99999999999999
Q ss_pred HHHHHHHHh--cCccccccccCCccHHHHHHH--cCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCcc-
Q psy12892 155 SIIELLADK--FRASIFERTKENYNVLHLAAM--YSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINV- 229 (315)
Q Consensus 155 ~~~~~Ll~~--~~~~~~~~~~~~~~~l~~a~~--~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~- 229 (315)
+++++|++. .|++++..+..|+||||+|+. .++.+..+.+ .+++++|++ .|+++
T Consensus 150 ~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~--------------------~~iv~~Ll~-~ga~~~ 208 (256)
T 2etb_A 150 DVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALV--------------------IHMYDGLLQ-MGARLC 208 (256)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH--------------------HHHHHHHHH-HHHHHS
T ss_pred HHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHH--------------------HHHHHHHHH-cCCCcc
Confidence 999999993 399999988888888888887 5666643322 347788887 78777
Q ss_pred ------ccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceee
Q psy12892 230 ------AALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIR 292 (315)
Q Consensus 230 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~ 292 (315)
+.+ +..|+||||+|+.. ++.+++++|+++|+++..
T Consensus 209 ~~~~~~~~~-------------------------d~~g~tpL~~A~~~---g~~~~v~~Ll~~g~~~~~ 249 (256)
T 2etb_A 209 PTVQLEEIS-------------------------NHQGLTPLKLAAKE---GKIEIFRHILQREFSGAA 249 (256)
T ss_dssp TTCCGGGCC-------------------------CTTSCCHHHHHHHT---TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccc-------------------------CCCCCCHHHHHHHh---CCHHHHHHHHhCCCCCCC
Confidence 553 67788888888888 888888888888877653
No 42
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-35 Score=227.99 Aligned_cols=187 Identities=24% Similarity=0.283 Sum_probs=174.8
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCC-cccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhh
Q psy12892 17 TINGDTALHLAARKRDLDMVRILVDYGT-SVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAG 95 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 95 (315)
+..+.||||.|+..|+.+.++.|++.+. +++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------- 70 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS----------- 70 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-----------
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----------
Confidence 3578999999999999999999998876 9999999999999999999999999999999999988776
Q ss_pred hhhHHhhhhccCCChHHHHHHhcCCHHHHHHHH-hCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccC
Q psy12892 96 TSVLANCLLMGEGQTALHIASAEGDEALVKYFY-GAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKE 174 (315)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 174 (315)
.|.||||+|+..|+.+++++|+ ..+.+++..+..|.||||+|+..|+.+++++|++..+.+++..+..
T Consensus 71 -----------~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 71 -----------ISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp -----------TSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred -----------CCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 7899999999999999999999 6777999999999999999999999999999999844999999999
Q ss_pred CccHHHHHHHcCc-----HHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccC
Q psy12892 175 NYNVLHLAAMYSR-----EDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKG 226 (315)
Q Consensus 175 ~~~~l~~a~~~~~-----~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~ 226 (315)
|.||||+|+..++ .+++++|++.+ +..|.||||+|+..++.+++++|++ +|
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~G 201 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ-YN 201 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT-CC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHh-cC
Confidence 9999999999997 99999999887 6778999999999999999999998 55
No 43
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-35 Score=220.83 Aligned_cols=154 Identities=33% Similarity=0.506 Sum_probs=144.9
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHh
Q psy12892 22 TALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLAN 101 (315)
Q Consensus 22 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (315)
++|+.||+.|+.++|++|+++|++++..|..|.||||+|+..++.+++++|+++|++++..+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~----------------- 68 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS----------------- 68 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-----------------
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-----------------
Confidence 469999999999999999999999999999999999999999999999999999999998876
Q ss_pred hhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHH
Q psy12892 102 CLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHL 181 (315)
Q Consensus 102 ~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~ 181 (315)
.|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..|+.+++++|++. |++++..+..|+|||++
T Consensus 69 -----~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 69 -----DGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNTSDSDGRTPLDL 142 (169)
T ss_dssp -----TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHH
T ss_pred -----CCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHH
Confidence 799999999999999999999999999999999999999999999999999999996 99999999888888888
Q ss_pred HHHcCcHHHHHHHHhcC
Q psy12892 182 AAMYSREDVVKLLLNKK 198 (315)
Q Consensus 182 a~~~~~~~~~~~Ll~~~ 198 (315)
|+..|+.+++++|+++|
T Consensus 143 A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 143 AREHGNEEVVKLLEKQG 159 (169)
T ss_dssp HHHTTCHHHHHHHHTC-
T ss_pred HHHcCCHHHHHHHHHCC
Confidence 88888888888888776
No 44
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.4e-37 Score=248.38 Aligned_cols=237 Identities=18% Similarity=0.149 Sum_probs=169.3
Q ss_pred hccccccCCCcHHHHHHHcCCHHHHHHHHH----cCCccc----ccCCCCChHHHHHHhc---CCHHHHHHHHhccCCCc
Q psy12892 12 QLKATTINGDTALHLAARKRDLDMVRILVD----YGTSVD----IQNGEGQTALHIASAE---GDEALVKYFYGAKANAS 80 (315)
Q Consensus 12 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~----~g~~~~----~~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~ 80 (315)
..+.+|..|.||||.||..|+.++|+.|++ .+.+++ ..+..|.||||+|+.. |+.+++++|+++|++..
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 356789999999999999999999998886 566665 3478999999999986 99999999999987533
Q ss_pred cccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCC--------------CCCcHHH
Q psy12892 81 ITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDH--------------QDRTPMH 146 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~--------------~~~~~l~ 146 (315)
.... .... .....+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||
T Consensus 85 ~~~~-----~i~~------~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~ 153 (273)
T 2pnn_A 85 SLKQ-----FVNA------SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLS 153 (273)
T ss_dssp CHHH-----HHTC------CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHH
T ss_pred chhH-----Hhhc------ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHH
Confidence 2100 0000 0000112789999999999999999999999999998886 7899999
Q ss_pred HHHHcCCHHHHHHHHHh--cCccccccccCCccHHHHHHHcCc--HHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHH
Q psy12892 147 LAAENGHASIIELLADK--FRASIFERTKENYNVLHLAAMYSR--EDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLL 222 (315)
Q Consensus 147 ~a~~~~~~~~~~~Ll~~--~~~~~~~~~~~~~~~l~~a~~~~~--~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll 222 (315)
+|+..|+.+++++|++. .|++++..+..|+||||+|+..++ .+..+++ .+++++|+
T Consensus 154 ~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~--------------------~~~v~~Ll 213 (273)
T 2pnn_A 154 LAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFV--------------------TSMYNEIL 213 (273)
T ss_dssp HHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHH--------------------HHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHH--------------------HHHHHHHH
Confidence 99999999999999983 388888888888888888887664 2222221 56888888
Q ss_pred hccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhcc-ceeeeccCCceeE
Q psy12892 223 NKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAG-REIRMTVDGTLIL 301 (315)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~-~~~~~~~~g~t~l 301 (315)
+ .|++++....... .++..|+||||+|+.. ++.+++++|+++|+ ||......+.+|-
T Consensus 214 ~-~ga~~n~~~~~~~------------------~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 214 I-LGAKLHPTLKLEE------------------ITNRKGLTPLALAASS---GKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp H-HHHHHCTTCCGGG------------------CCCTTSCCHHHHHHHT---TCHHHHHHHHHHHTC-------------
T ss_pred H-hhhhccccccccc------------------ccCCCCCCHHHHHHHh---ChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 8 8888863100000 0267899999999999 99999999999999 8888777776654
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-35 Score=234.14 Aligned_cols=197 Identities=19% Similarity=0.185 Sum_probs=172.8
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhc-cCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGA-KANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGA 130 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~ 130 (315)
.|.||||+|+..|+.+++++|++. |++++..+. .|.||||+|+..|+.+++++|++.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~----------------------~g~t~L~~A~~~g~~~~v~~Ll~~ 59 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGA----------------------MGETALHIAALYDNLEAAMVLMEA 59 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCC----------------------CCCCHHHHHHHcCCHHHHHHHHHc
Confidence 588999999999999999999998 999988876 799999999999999999999999
Q ss_pred CCCc-----ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccccc-------------CCccHHHHHHHcCcHHHHH
Q psy12892 131 KANA-----SITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTK-------------ENYNVLHLAAMYSREDVVK 192 (315)
Q Consensus 131 ~~~~-----~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~~~ 192 (315)
+.++ +..+..|.||||+|+..|+.+++++|+++ |++++..+. .|.||||+|+..|+.++++
T Consensus 60 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~ 138 (232)
T 2rfa_A 60 APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVR 138 (232)
T ss_dssp CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHH
T ss_pred CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHH
Confidence 9886 56677899999999999999999999996 999888765 7999999999999999999
Q ss_pred HHHhcC------CCCCCcHHHHHHHcCCHHHH----HHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcC
Q psy12892 193 LLLNKK------GIENYNVLHLAAMYSREDVV----KLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQ 262 (315)
Q Consensus 193 ~Ll~~~------~~~~~~~l~~A~~~~~~~~~----~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (315)
+|++.+ +..|.||||+|+..++.+++ ++|++ .|++++....... ++..|+
T Consensus 139 ~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-~g~~~~~~~~~~~-------------------~~~~g~ 198 (232)
T 2rfa_A 139 LLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS-YDGGDHLKSLELV-------------------PNNQGL 198 (232)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-TTCSCSSCCGGGC-------------------CCTTSC
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-cCCchhhhhhhcc-------------------CCCCCC
Confidence 999887 67799999999999999988 99999 9988742100000 377899
Q ss_pred CcceeeeccCCCCcHHHHHHHHhhccceeeec
Q psy12892 263 TAVHLVCSRQTGTATSILRALLSTAGREIRMT 294 (315)
Q Consensus 263 t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~ 294 (315)
||||+|+.. ++.+++++|+++|+++....
T Consensus 199 tpl~~A~~~---g~~~~v~~Ll~~g~~~~~~~ 227 (232)
T 2rfa_A 199 TPFKLAGVE---GNIVMFQHLMQKRKHIAAAH 227 (232)
T ss_dssp CHHHHHHHH---TCHHHHHHHHHHHHHC----
T ss_pred CHHHHHHHc---CCHHHHHHHHhcCccchhhh
Confidence 999999999 99999999999998876544
No 46
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5e-35 Score=225.55 Aligned_cols=187 Identities=24% Similarity=0.248 Sum_probs=174.5
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccC-CCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHH
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKA-NASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFY 128 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll 128 (315)
+..+.||||.|+..|+.++++.|++.+. +++..+. .|.||||+|+..|+.+++++|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll 59 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDT----------------------EGNTPLNIAVHNNDIEIAKALI 59 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCT----------------------TSCCHHHHHHHHTCHHHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCC----------------------CCCCHHHHHHHcCCHHHHHHHH
Confidence 3567899999999999999999998877 7777765 7899999999999999999999
Q ss_pred hCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-------CCC
Q psy12892 129 GAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK-------GIE 201 (315)
Q Consensus 129 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-------~~~ 201 (315)
+.|++++..+..|.||||+|+..|+.+++++|++..+.+++..+..|.||||+|+..++.+++++|++.+ +..
T Consensus 60 ~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 60 DRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 9999999999999999999999999999999997778899999999999999999999999999999877 567
Q ss_pred CCcHHHHHHHcCC-----HHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCc
Q psy12892 202 NYNVLHLAAMYSR-----EDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTA 276 (315)
Q Consensus 202 ~~~~l~~A~~~~~-----~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~ 276 (315)
|.||||.|+..++ .+++++|++ .|++++.+ +..|.||||+|+.. ++
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~~g~t~l~~A~~~---~~ 190 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLME-NGADQSIK-------------------------DNSGRTAMDYANQK---GY 190 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHH-TTCCTTCC-------------------------CTTSCCHHHHHHHH---TC
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHH-CCCCCCcc-------------------------CCCCCCHHHHHHHc---CC
Confidence 8999999999998 999999999 99999985 67899999999999 99
Q ss_pred HHHHHHHHhhc
Q psy12892 277 TSILRALLSTA 287 (315)
Q Consensus 277 ~~~i~~Ll~~g 287 (315)
.+++++|+++|
T Consensus 191 ~~~~~~Ll~~G 201 (201)
T 3hra_A 191 TEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHTCC
T ss_pred HhHHHHHHhcC
Confidence 99999999987
No 47
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-36 Score=248.51 Aligned_cols=238 Identities=19% Similarity=0.199 Sum_probs=197.0
Q ss_pred HHHHcCCHHHHHHHHHcCCcccc---------cCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhh
Q psy12892 26 LAARKRDLDMVRILVDYGTSVDI---------QNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 26 ~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 96 (315)
.++..+..+.++.++....++.. .+..|.|||+.|+..|+.+++++|+++|++++..+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------ 71 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANV------------ 71 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCT------------
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCC------------
Confidence 46777888888888877655332 233567999999999999999999999999988776
Q ss_pred hhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCc
Q psy12892 97 SVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENY 176 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 176 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.
T Consensus 72 ----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~ 140 (299)
T 1s70_B 72 ----------DGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQ-GAHVGAVNSEGD 140 (299)
T ss_dssp ----------TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSC
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCC
Confidence 799999999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHH
Q psy12892 177 NVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVY 256 (315)
Q Consensus 177 ~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (315)
|||++|+..++.+++++++......-... ...........+..++. .+......
T Consensus 141 t~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~~~~~~~------------------------ 194 (299)
T 1s70_B 141 TPLDIAEEEAMEELLQNEVNRQGVDIEAA-RKEEERIMLRDARQWLN-SGHINDVR------------------------ 194 (299)
T ss_dssp CHHHHCCSHHHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHHHH-HTCCCCCC------------------------
T ss_pred CHHHHHHhcchHHHHHHHHhhcCCCchhh-hhhhhhHHHHHHHHHHh-ccCcchhh------------------------
Confidence 99999999999999999987643221111 11111112234445555 34333322
Q ss_pred HhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 257 LISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 257 ~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
.+..|.||||+|+.. |+.+++++|+++|++++.+|..|.||||+|++.|+.+++++
T Consensus 195 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~ 250 (299)
T 1s70_B 195 HAKSGGTALHVAAAK---GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250 (299)
T ss_dssp CTTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred hcCCCCCHHHHHHHC---CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHH
Confidence 267799999999999 99999999999999999999999999999999999999863
No 48
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.3e-36 Score=240.41 Aligned_cols=195 Identities=22% Similarity=0.309 Sum_probs=160.4
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhccC----CCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHH
Q psy12892 48 IQNGEGQTALHIASAEGDEALVKYFYGAKA----NASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEAL 123 (315)
Q Consensus 48 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~ 123 (315)
..|..|.||||+|+..|+.+++++|++.+. +++..+. .|.||||+|+..|+.++
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~ 60 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN----------------------LQQTPLHLAVITNQPEI 60 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCT----------------------TCCCHHHHHHHTTCHHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCC----------------------CCCCHHHHHHHcCCHHH
Confidence 457788899999999999888888887765 4555554 68889999998889999
Q ss_pred HHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCC
Q psy12892 124 VKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENY 203 (315)
Q Consensus 124 v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 203 (315)
+++|++.|++++..+..|.||||+|+..|+.+++++|++. +.+..... .++..+..|.
T Consensus 61 v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~---------------------~~~~~~~~g~ 118 (236)
T 1ikn_D 61 AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQS-CTTPHLHS---------------------ILKATNYNGH 118 (236)
T ss_dssp HHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHS-TTTTSSSC---------------------GGGCCCTTCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhHHH---------------------HhhccCCCCC
Confidence 9998888888888888888999999998888898888885 54432111 1234466788
Q ss_pred cHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhh-hcCCcceeeeccCCCCcHHHHHH
Q psy12892 204 NVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLIS-KQQTAVHLVCSRQTGTATSILRA 282 (315)
Q Consensus 204 ~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~t~L~~A~~~~~~~~~~~i~~ 282 (315)
||||+|+..++.+++++|++ .|++++.. +. .|.||||+|+.. ++.+++++
T Consensus 119 t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-------------------------~~~~g~tpL~~A~~~---~~~~~v~~ 169 (236)
T 1ikn_D 119 TCLHLASIHGYLGIVELLVS-LGADVNAQ-------------------------EPCNGRTALHLAVDL---QNPDLVSL 169 (236)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-HTCCTTCC-------------------------CTTTCCCHHHHHHHT---TCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH-cCCCCCCC-------------------------CCCCCCCHHHHHHHc---CCHHHHHH
Confidence 99999999999999999999 99999985 44 799999999999 99999999
Q ss_pred HHhhccceeeeccCCceeEEEeecCchhhhhcC
Q psy12892 283 LLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 283 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~l 315 (315)
|+++|++++.+|..|.|||++|+++|+.+++++
T Consensus 170 Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~ 202 (236)
T 1ikn_D 170 LLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQ 202 (236)
T ss_dssp HHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHH
T ss_pred HHHcCCCCCcccCCCCCHHHHHHccCchHHHHH
Confidence 999999999999999999999999999999863
No 49
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.2e-34 Score=220.27 Aligned_cols=167 Identities=19% Similarity=0.218 Sum_probs=158.8
Q ss_pred chhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchh
Q psy12892 9 TAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQ 88 (315)
Q Consensus 9 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 88 (315)
.+..+|.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---- 99 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF---- 99 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT----
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC----
Confidence 3345788999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccc
Q psy12892 89 RDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASI 168 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~ 168 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |+++
T Consensus 100 ------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~ 160 (192)
T 2rfm_A 100 ------------------SGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADI 160 (192)
T ss_dssp ------------------TSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCT
T ss_pred ------------------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCC
Confidence 789999999999999999999999999999999999999999999999999999996 9999
Q ss_pred cccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 169 FERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 169 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
+..+..|.||+++|+..++.+++++|++.+
T Consensus 161 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 161 SARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999998754
No 50
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.1e-35 Score=244.17 Aligned_cols=196 Identities=15% Similarity=0.149 Sum_probs=162.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCcccc-cCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHH
Q psy12892 22 TALHLAARKRDLDMVRILVDYGTSVDI-QNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLA 100 (315)
Q Consensus 22 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (315)
+.+|.|+..+..+++++|++.|++++. .|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~---------------- 162 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDN---------------- 162 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCT----------------
T ss_pred chhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------
Confidence 345888888889999999999999999 899999999999999999999999999999998876
Q ss_pred hhhhccCCChHHHHHHhcCC---HHHHHHHHhCC-CCcccCCCCCCcHHHHHHH----cCCHHHHHHHHHhc--------
Q psy12892 101 NCLLMGEGQTALHIASAEGD---EALVKYFYGAK-ANASITDHQDRTPMHLAAE----NGHASIIELLADKF-------- 164 (315)
Q Consensus 101 ~~~~~~~~~~~l~~A~~~~~---~~~v~~Ll~~~-~~~~~~~~~~~~~l~~a~~----~~~~~~~~~Ll~~~-------- 164 (315)
.|.||||+|+..|+ .++++.|++.+ .+++..+..|.||||+|+. .|+.+++++|++..
T Consensus 163 ------~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~ 236 (327)
T 1sw6_A 163 ------MGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 236 (327)
T ss_dssp ------TCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGG
T ss_pred ------CCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhccc
Confidence 79999999999998 67777777765 6788999999999999999 89999999999853
Q ss_pred -----------CccccccccCCccHHHHHHHcCcHHHHHHHHhcC----CCCCCcHHHHHHHcCCHHHHHHHHhccCCcc
Q psy12892 165 -----------RASIFERTKENYNVLHLAAMYSREDVVKLLLNKK----GIENYNVLHLAAMYSREDVVKLLLNKKGINV 229 (315)
Q Consensus 165 -----------~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~----~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~ 229 (315)
+++++..+..|.|||+.|+. +++|++.. +..|.||||+|+..++.+++++|++ .|+++
T Consensus 237 ~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~Gad~ 309 (327)
T 1sw6_A 237 NRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD-YGADP 309 (327)
T ss_dssp GCCEEEC----------------CHHHHHCS------HHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH-TTCCT
T ss_pred chHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCC
Confidence 78889999999999999986 77776554 7789999999999999999999999 99999
Q ss_pred ccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeecc
Q psy12892 230 AALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSR 271 (315)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~ 271 (315)
+.+ +..|+||||+|++.
T Consensus 310 ~~~-------------------------d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 310 FIA-------------------------NKSGLRPVDFGAGL 326 (327)
T ss_dssp TCC-------------------------CTTSCCGGGGTCC-
T ss_pred ccc-------------------------CCCCCCHHHHHHhc
Confidence 985 78899999999986
No 51
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3e-33 Score=208.13 Aligned_cols=153 Identities=33% Similarity=0.465 Sum_probs=142.1
Q ss_pred hHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCc
Q psy12892 55 TALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANA 134 (315)
Q Consensus 55 t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~ 134 (315)
++|+.|+..|+.++|++|+++|++++..+. .|.|||++|+..++.+++++|++.|+++
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~----------------------~g~t~l~~a~~~~~~~~~~~ll~~gad~ 63 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDS----------------------DGRTPLHHAAENGHKEVVKLLISKGADV 63 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCC----------------------CCCCHHHHHHHcCCHHHHHHHHhcccch
Confidence 579999999999999999999999998887 7999999999999999999999999999
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHHH
Q psy12892 135 SITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLHL 208 (315)
Q Consensus 135 ~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~ 208 (315)
+..+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|++.+ +..|.|||++
T Consensus 64 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 64 NAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDL 142 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred hhhccCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 99999999999999999999999999996 9999999999999999999999999999999987 6789999999
Q ss_pred HHHcCCHHHHHHHHhccCCcccc
Q psy12892 209 AAMYSREDVVKLLLNKKGINVAA 231 (315)
Q Consensus 209 A~~~~~~~~~~~Ll~~~~~~~~~ 231 (315)
|+..++.+++++|++ +|++++.
T Consensus 143 A~~~g~~~iv~~Ll~-~GA~ie~ 164 (169)
T 4gpm_A 143 AREHGNEEVVKLLEK-QGGWLEH 164 (169)
T ss_dssp HHHTTCHHHHHHHHT-C------
T ss_pred HHHcCCHHHHHHHHH-CCCCcCC
Confidence 999999999999999 9999875
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=3.4e-34 Score=229.80 Aligned_cols=203 Identities=19% Similarity=0.194 Sum_probs=168.9
Q ss_pred ccCCCcHHHHHHHcCCHHHHHH----HHHcCCcccccC----CCCChHHHHHH---hcCCHHHHHHHHhccCCCcccccc
Q psy12892 17 TINGDTALHLAARKRDLDMVRI----LVDYGTSVDIQN----GEGQTALHIAS---AEGDEALVKYFYGAKANASITDHQ 85 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~----Ll~~g~~~~~~~----~~g~t~l~~A~---~~~~~~~v~~Ll~~~~~~~~~~~~ 85 (315)
+..|+|+||.||+.|+.+.++. |++.|++++..+ ..|.||||+|+ ..|+.+++++|++.|++.......
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 4578999999999999995554 445899988665 77999999999 779999999999988653221100
Q ss_pred chhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCC--------------CCCCcHHHHHHHc
Q psy12892 86 GIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITD--------------HQDRTPMHLAAEN 151 (315)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~--------------~~~~~~l~~a~~~ 151 (315)
.. ......+..|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..
T Consensus 82 -----~~------~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 82 -----IN------SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp -----HT------CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred -----hc------ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHc
Confidence 00 0000001168999999999999999999999999999988 6899999999999
Q ss_pred CCHHHHHHHHHh--cCccccccccCCccHHHHHHHcCc---------HHHHHHHHhc-------------CCCCCCcHHH
Q psy12892 152 GHASIIELLADK--FRASIFERTKENYNVLHLAAMYSR---------EDVVKLLLNK-------------KGIENYNVLH 207 (315)
Q Consensus 152 ~~~~~~~~Ll~~--~~~~~~~~~~~~~~~l~~a~~~~~---------~~~~~~Ll~~-------------~~~~~~~~l~ 207 (315)
|+.+++++|++. .|++++..+..|+||||+|+..++ .+++++|++. .+..|.||||
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 999999999993 399999999999999999998877 7899999876 4678999999
Q ss_pred HHHHcCCHHHHHHHHhccCCcccc
Q psy12892 208 LAAMYSREDVVKLLLNKKGINVAA 231 (315)
Q Consensus 208 ~A~~~~~~~~~~~Ll~~~~~~~~~ 231 (315)
+|+..|+.+++++|++ +|.+...
T Consensus 231 ~A~~~g~~~~v~~Ll~-~g~~~~~ 253 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIR-REIADAA 253 (260)
T ss_dssp HHHHTTCHHHHHHHHH-HHHHHHC
T ss_pred HHHHcCCHHHHHHHHH-hCCCccc
Confidence 9999999999999999 7776654
No 53
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.2e-35 Score=229.24 Aligned_cols=194 Identities=11% Similarity=0.058 Sum_probs=167.3
Q ss_pred HHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHH
Q psy12892 69 VKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLA 148 (315)
Q Consensus 69 v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a 148 (315)
++.|+++|++++..+.... .+.||||.|+..|+.+++++|++.|++++..+..|.||||+|
T Consensus 1 v~~ll~~~~~~~~~~~~~~-------------------~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A 61 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARL-------------------NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61 (229)
T ss_dssp ---------CCCCCCCTTS-------------------CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH
T ss_pred CeehhccCCCCcccccccc-------------------chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 4678888888776655332 677899999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-------CCCCCcHHHHH--HHcCCHHHHH
Q psy12892 149 AENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK-------GIENYNVLHLA--AMYSREDVVK 219 (315)
Q Consensus 149 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-------~~~~~~~l~~A--~~~~~~~~~~ 219 (315)
+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|++.+ +..|.||||+| +..++.++++
T Consensus 62 ~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 62 ICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp HHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred HHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 999999999999996 9999999999999999999999999999999887 25899999999 9999999999
Q ss_pred HHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccc--eeeeccCC
Q psy12892 220 LLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGR--EIRMTVDG 297 (315)
Q Consensus 220 ~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~--~~~~~~~g 297 (315)
+|++ .|++++.. +..+.||++.++.. . ..++|++.|++ ++.+|..|
T Consensus 141 ~Ll~-~ga~~~~~-------------------------~~~~~~~l~~~~~~---~---~~~~ll~~ga~~~~~~~d~~G 188 (229)
T 2vge_A 141 YLAD-VEQSMGLM-------------------------NSGAVYALWDYSAE---F---GDELSFREGESVTVLRRDGPE 188 (229)
T ss_dssp HHHH-HHHHTTTS-------------------------GGGEEEESSCBCCS---S---TTBCCBCTTCEEEEEESSCTT
T ss_pred HHHH-cCCCcccc-------------------------cCCchHHHHHHhhc---c---ccccCccccccccccccCCCc
Confidence 9999 99999985 67888999977766 3 33688999999 67889999
Q ss_pred ceeEEEeecCchhhhhc
Q psy12892 298 TLILYYRGKDSKAQIEE 314 (315)
Q Consensus 298 ~t~l~~A~~~~~~~~~~ 314 (315)
.|||++|++.|+.++|+
T Consensus 189 ~TpL~~A~~~g~~~~v~ 205 (229)
T 2vge_A 189 ETDWWWAALHGQEGYVP 205 (229)
T ss_dssp CSSEEEEEETTEEEEEE
T ss_pred ccHHHHHHHcCCcceee
Confidence 99999999999999886
No 54
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=1.1e-32 Score=206.43 Aligned_cols=161 Identities=28% Similarity=0.385 Sum_probs=150.2
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.....+.++|+.||+.|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 78 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH---------- 78 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------
Confidence 3456778999999999999999999999999999999999999999999999999999999999988776
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccC
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKE 174 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 174 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..
T Consensus 79 ------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~ 145 (169)
T 2y1l_E 79 ------------AGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-GADVNAQDKF 145 (169)
T ss_dssp ------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred ------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCC
Confidence 789999999999999999999999999999999999999999999999999999996 9999999999
Q ss_pred CccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 175 NYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 175 ~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
|.||+++|+..++.+++++|++.|
T Consensus 146 g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 146 GKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999998764
No 55
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1e-32 Score=206.24 Aligned_cols=157 Identities=20% Similarity=0.308 Sum_probs=150.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
.|.||||.|+..|+.+++++|++.|.+++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 67 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-------------- 67 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC--------------
Confidence 589999999999999999999999999999999999999999999999999999999999988776
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccH
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNV 178 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 178 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||
T Consensus 68 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 68 --------GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES-GADPTIETDSGYNS 138 (167)
T ss_dssp --------TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred --------CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCH
Confidence 789999999999999999999999999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcC
Q psy12892 179 LHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 179 l~~a~~~~~~~~~~~Ll~~~ 198 (315)
+++|+..|+.+++++|++++
T Consensus 139 l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHH
Confidence 99999999999999998754
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.9e-33 Score=223.86 Aligned_cols=186 Identities=18% Similarity=0.174 Sum_probs=155.7
Q ss_pred hhHhhhhchhhccc----cccCCCcHHHHHHHc---CCHHHHHHHHHcCCccccc-----------CCCCChHHHHHHhc
Q psy12892 2 WELLSTQTAEQLKA----TTINGDTALHLAARK---RDLDMVRILVDYGTSVDIQ-----------NGEGQTALHIASAE 63 (315)
Q Consensus 2 ~~~l~~~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~-----------~~~g~t~l~~A~~~ 63 (315)
++++++.+. +++. +|..|.||||+|+.. |+.+++++|++.|++++.. |..|.||||+|+..
T Consensus 22 l~~l~~~g~-~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~ 100 (256)
T 2etb_A 22 LEYLRWNSK-YLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEK 100 (256)
T ss_dssp HHHHHHHTC-CTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHHcCC-CcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHc
Confidence 345555554 5887 899999999999999 9999999999999887633 36799999999999
Q ss_pred CCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh---CCCCcccCCCC
Q psy12892 64 GDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG---AKANASITDHQ 140 (315)
Q Consensus 64 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~ 140 (315)
|+.+++++|+++|++++..+....... .....+..|.||||+|+..|+.+++++|++ .|++++..+..
T Consensus 101 g~~~~v~~Ll~~ga~~~~~~~~~~~~~---------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~ 171 (256)
T 2etb_A 101 RSLQCVKLLVENGADVHLRACGRFFQK---------HQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSL 171 (256)
T ss_dssp TCHHHHHHHHHTTCCTTCCCCSGGGSC---------CSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTT
T ss_pred CCHHHHHHHHHcCCCCCcccccccccc---------cccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCC
Confidence 999999999999999988775311000 000000139999999999999999999999 99999999999
Q ss_pred CCcHHHHHHH--cCCHH-------HHHHHHHhcCccc-------cccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 141 DRTPMHLAAE--NGHAS-------IIELLADKFRASI-------FERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 141 ~~~~l~~a~~--~~~~~-------~~~~Ll~~~~~~~-------~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
|.||||+|+. .++.+ ++++|+++ |+++ +..+..|.||||+|+..|+.+++++|++++
T Consensus 172 g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g 244 (256)
T 2etb_A 172 GNTVLHALVMIADNSPENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244 (256)
T ss_dssp SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcccCCchhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCC
Confidence 9999999999 78888 99999997 9998 788888888888888888888888888765
No 57
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=2.5e-32 Score=203.07 Aligned_cols=156 Identities=28% Similarity=0.435 Sum_probs=145.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
...||||.|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++..+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-------------- 68 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR-------------- 68 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC--------------
Confidence 56799999999999999999999999999999999999999999 999999999999999988776
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcc-ccccccCCcc
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRAS-IFERTKENYN 177 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~-~~~~~~~~~~ 177 (315)
.|.||||+|+..++.+++++|++.|.+++..+..|.||||+|+..|+.+++++|+++ +.+ ++..+..|.|
T Consensus 69 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 69 --------TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH-TASNVGHRNHKGDT 139 (162)
T ss_dssp --------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-SCCCTTCCCTTSCC
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-cCCCCCCcCCCCCc
Confidence 789999999999999999999999999999999999999999999999999999997 666 6888888899
Q ss_pred HHHHHHHcCcHHHHHHHHhcC
Q psy12892 178 VLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 178 ~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
||++|+..++.+++++|+++|
T Consensus 140 ~l~~A~~~~~~~~~~~Ll~~G 160 (162)
T 1ihb_A 140 ACDLARLYGRNEVVSLMQANG 160 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHhC
Confidence 999999998888888888875
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=4.2e-32 Score=203.88 Aligned_cols=156 Identities=24% Similarity=0.335 Sum_probs=147.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCc-ccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 20 GDTALHLAARKRDLDMVRILVDYGTS-VDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 20 g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
+.||||.|+..|+++++++|++.|.+ ++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-------------- 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT--------------
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc--------------
Confidence 57899999999999999999999987 888899999999999999999999999999999988776
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccH
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNV 178 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 178 (315)
.|.||||+|+..++.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||
T Consensus 68 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~ 138 (172)
T 3v30_A 68 --------ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR-GADLTTEADSGYTP 138 (172)
T ss_dssp --------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred --------cCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCH
Confidence 789999999999999999999999999999999999999999999999999999996 99999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcC
Q psy12892 179 LHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 179 l~~a~~~~~~~~~~~Ll~~~ 198 (315)
|++|+..++.+++++|++++
T Consensus 139 l~~A~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 139 MDLAVALGYRKVQQVIENHI 158 (172)
T ss_dssp HHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHH
Confidence 99999999999999999865
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=2.8e-32 Score=220.07 Aligned_cols=181 Identities=16% Similarity=0.246 Sum_probs=102.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCc--ccccCCCCChHHHHHHhcCCHHHHHHHHhccC-CCccccccchhhHHHhhhh
Q psy12892 20 GDTALHLAARKRDLDMVRILVDYGTS--VDIQNGEGQTALHIASAEGDEALVKYFYGAKA-NASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 20 g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~~ 96 (315)
+.+++|.|+..|+++.++.+++.+.+ ++..|..|.||||+|+..|+.+++++|++.|+ +++..+.
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~------------ 143 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNR------------ 143 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCT------------
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCC------------
Confidence 34555555555555555555555444 45555555555555555555555555555555 5554444
Q ss_pred hhHHhhhhccCCChHHHHHH-----hcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q psy12892 97 SVLANCLLMGEGQTALHIAS-----AEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER 171 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 171 (315)
.|.||||+|+ ..++.+++++|++.|..++..+..|.||||+|+..|+.+++++|++. |++++..
T Consensus 144 ----------~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~ 212 (276)
T 4hbd_A 144 ----------AGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQ 212 (276)
T ss_dssp ----------TSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC
T ss_pred ----------CCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC
Confidence 4555555555 33455555555555555555555555555555555555555555554 5555555
Q ss_pred ccCCccHHHHHHHcCcHHHHHHHHh-cC------CCCCCcHHHHHHHcCCHHHHHHHHh
Q psy12892 172 TKENYNVLHLAAMYSREDVVKLLLN-KK------GIENYNVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 172 ~~~~~~~l~~a~~~~~~~~~~~Ll~-~~------~~~~~~~l~~A~~~~~~~~~~~Ll~ 223 (315)
+..|.||||+|+..|+.+++++|++ .+ +..|.||||+|+..|+.+++++|++
T Consensus 213 d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 213 DDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 5555555555555555555555555 23 4445556666666666666666655
No 60
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.7e-33 Score=223.15 Aligned_cols=202 Identities=16% Similarity=0.169 Sum_probs=168.1
Q ss_pred CCCCChHHHHHHhcCCHHH----HHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHH---hcCCHH
Q psy12892 50 NGEGQTALHIASAEGDEAL----VKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIAS---AEGDEA 122 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~----v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~---~~~~~~ 122 (315)
+..+.++||.|+..|+.+. +++|++.+++++..+.. .+..|.||||+|+ ..|+.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~------------------~~~~g~t~L~~A~~~~~~g~~~ 63 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFR------------------EPSTGKTCLPKALLNLSAGRND 63 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGS------------------CTTTCCCHHHHHHTSCBTTBCT
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhh------------------ccCCCCcHHHHHHHHhhcCCHH
Confidence 4568899999999999995 55555589988866521 0016999999999 679999
Q ss_pred HHHHHHhCCCC-----------cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccc--------------cCCcc
Q psy12892 123 LVKYFYGAKAN-----------ASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERT--------------KENYN 177 (315)
Q Consensus 123 ~v~~Ll~~~~~-----------~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~~ 177 (315)
++++|++.|.+ .+..+..|.||||+|+..|+.+++++|++. |++++..+ ..|.|
T Consensus 64 ~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~t 142 (260)
T 3jxi_A 64 TIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGEL 142 (260)
T ss_dssp HHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSS
T ss_pred HHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccccCCCC
Confidence 99999987643 344455899999999999999999999996 99999988 58999
Q ss_pred HHHHHHHcCcHHHHHHHHh---cC------CCCCCcHHHHHHHcCC---------HHHHHHHHhccCCccccCCCCCCCC
Q psy12892 178 VLHLAAMYSREDVVKLLLN---KK------GIENYNVLHLAAMYSR---------EDVVKLLLNKKGINVAALGGEDLTG 239 (315)
Q Consensus 178 ~l~~a~~~~~~~~~~~Ll~---~~------~~~~~~~l~~A~~~~~---------~~~~~~Ll~~~~~~~~~~~~~~~~~ 239 (315)
|||+|+..|+.+++++|++ .+ +..|.||||+|+..++ .+++++|++ .|++++.......
T Consensus 143 pL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~-- 219 (260)
T 3jxi_A 143 PLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEA-- 219 (260)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGG--
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhh--
Confidence 9999999999999999999 65 6789999999998887 799999999 9999842100000
Q ss_pred CCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceee
Q psy12892 240 RPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIR 292 (315)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~ 292 (315)
..+..|+||||+|+.. |+.+++++|+++|+++..
T Consensus 220 ----------------~~d~~g~tpL~~A~~~---g~~~~v~~Ll~~g~~~~~ 253 (260)
T 3jxi_A 220 ----------------LLNNDGLSPLMMAAKT---GKIGIFQHIIRREIADAA 253 (260)
T ss_dssp ----------------CCCTTSCCHHHHHHHT---TCHHHHHHHHHHHHHHHC
T ss_pred ----------------cccCCCCCHHHHHHHc---CCHHHHHHHHHhCCCccc
Confidence 0378899999999999 999999999999987754
No 61
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=7.7e-33 Score=223.39 Aligned_cols=166 Identities=24% Similarity=0.361 Sum_probs=157.8
Q ss_pred hccccccCCCcHHHHHHHcCCHHHHHHHHHcCC-cccccCCCCChHHHHHH-----hcCCHHHHHHHHhccCCCcccccc
Q psy12892 12 QLKATTINGDTALHLAARKRDLDMVRILVDYGT-SVDIQNGEGQTALHIAS-----AEGDEALVKYFYGAKANASITDHQ 85 (315)
Q Consensus 12 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~ 85 (315)
.+|.+|.+|.||||+||..|+.+++++|++.|+ +++..+..|.||||+|+ ..++.+++++|++.|...+..+.
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~- 181 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ- 181 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-
Confidence 489999999999999999999999999999998 99999999999999999 67899999999999988877665
Q ss_pred chhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcC
Q psy12892 86 GIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFR 165 (315)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~ 165 (315)
.|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++..|
T Consensus 182 ---------------------~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~g 240 (276)
T 4hbd_A 182 ---------------------AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPS 240 (276)
T ss_dssp ---------------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTT
T ss_pred ---------------------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC
Confidence 79999999999999999999999999999999999999999999999999999999559
Q ss_pred ccccccccCCccHHHHHHHcCcHHHHHHHHhcCC
Q psy12892 166 ASIFERTKENYNVLHLAAMYSREDVVKLLLNKKG 199 (315)
Q Consensus 166 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~ 199 (315)
++++..+..|.|||++|+..|+.+++++|+++.+
T Consensus 241 ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 241 CDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 9999999999999999999999999999998753
No 62
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-31 Score=197.19 Aligned_cols=151 Identities=25% Similarity=0.342 Sum_probs=143.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhH
Q psy12892 20 GDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVL 99 (315)
Q Consensus 20 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (315)
+.|+|+.|+..|+.+++++|++.|++++ .+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------------- 65 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK--------------- 65 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT---------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC---------------
Confidence 4689999999999999999999999886 588899999999999999999999999999988776
Q ss_pred HhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHH
Q psy12892 100 ANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVL 179 (315)
Q Consensus 100 ~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l 179 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.||+
T Consensus 66 -------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 66 -------VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAF 137 (153)
T ss_dssp -------TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred -------CCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHH
Confidence 789999999999999999999999999999999999999999999999999999996 999999999999999
Q ss_pred HHHHHcCcHHHHHHH
Q psy12892 180 HLAAMYSREDVVKLL 194 (315)
Q Consensus 180 ~~a~~~~~~~~~~~L 194 (315)
++|+..|+.+++++|
T Consensus 138 ~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 138 DISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999886
No 63
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.98 E-value=1.5e-34 Score=241.25 Aligned_cols=260 Identities=14% Similarity=0.127 Sum_probs=180.1
Q ss_pred CCcHHHHHHH-cCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 20 GDTALHLAAR-KRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 20 g~t~L~~A~~-~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
+.+++++|.. .++.++++++++.|.+. .||||+|+..|+.+++++|+++|+.....+..
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~~~-------~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~------------- 124 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGIKS-------EVICFVAAITGCSSALDTLCLLLTSDEIVKVI------------- 124 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTCCH-------HHHHHHHHHHCCHHHHHHHTTC--CCSSCC---------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCCCc-------CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHh-------------
Confidence 4557777776 57889999999888765 39999999999999999999998732211100
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCc---ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccc--ccc
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANA---SITDHQDRTPMHLAAENGHASIIELLADKFRASIFE--RTK 173 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~--~~~ 173 (315)
+..|.||||+|+..|+.+++++|++.|+++ +..+.. .||||+|+..|+.+++++|+++ |++++. .+.
T Consensus 125 ------~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-ga~~~~~~~d~ 196 (376)
T 2aja_A 125 ------QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL-APTEATAMIQA 196 (376)
T ss_dssp ------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS-CGGGHHHHHHH
T ss_pred ------ccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc-CCccchhccCC
Confidence 004568999999999999999999999752 222223 8999999999999999999996 888877 788
Q ss_pred CCccHHHHHH-HcCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCcccc---chh-
Q psy12892 174 ENYNVLHLAA-MYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTV---GPV- 248 (315)
Q Consensus 174 ~~~~~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~---~~~- 248 (315)
.|.||||+|+ ..|+.+++++|++.+. .+.|||+.|+..|+.+++++|++ .|.+++..+............ .+.
T Consensus 197 ~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-~~~taL~~Aa~~g~~evv~lL~~-~ga~~~~~~~~l~~A~~~g~~~vv~~~~ 274 (376)
T 2aja_A 197 ENYYAFRWAAVGRGHHNVINFLLDCPV-MLAYAEIHEFEYGEKYVNPFIAR-HVNRLKEMHDAFKLSNPDGVFDLVTKSE 274 (376)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHTTSHH-HHHHHHHCTTTTTTTTHHHHHHH-HHHHHHHHHTTTTTTSSSSCCCCSSHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHhCCC-ccchHHHHHHHCCCHHHHHHHHh-cCcccccccHHHHHHHHCCChhhhcHHh
Confidence 8999999999 9999999999998653 47899999999999999999998 888876554332221111100 000
Q ss_pred -------h---------------hhhHHH----------HHhhhcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccC
Q psy12892 249 -------Q---------------AYLYQV----------YLISKQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVD 296 (315)
Q Consensus 249 -------~---------------~~~~~~----------~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~ 296 (315)
. .++... .....+.||||+|++. |+.+++++|++.| .+.+..
T Consensus 275 ~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~---g~~e~v~lLl~~~---~v~~~~ 348 (376)
T 2aja_A 275 CLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRL---GNQGACALLLSIP---SVLALT 348 (376)
T ss_dssp HHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHH---TCTTHHHHHTTSH---HHHHSC
T ss_pred hhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHc---CcHHHHHHHHcCh---HHHHHH
Confidence 0 011100 1123456789999999 9999999999976 777888
Q ss_pred CceeEEEeecCchhhhhcC
Q psy12892 297 GTLILYYRGKDSKAQIEEL 315 (315)
Q Consensus 297 g~t~l~~A~~~~~~~~~~l 315 (315)
++|++++|.+.|..++.++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 349 KANNYYINETGGRLDLRAV 367 (376)
T ss_dssp C------------------
T ss_pred HHhccccccccccccHHHH
Confidence 9999999999999998764
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=8.8e-31 Score=193.42 Aligned_cols=153 Identities=25% Similarity=0.359 Sum_probs=144.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHc-CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 20 GDTALHLAARKRDLDMVRILVDY-GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 20 g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
|.||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-------------- 66 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-------------- 66 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC--------------
Confidence 56899999999999999999998 45899999999999999 999999999999999999988876
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccH
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNV 178 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~ 178 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. .+++..+..|.||
T Consensus 67 --------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 67 --------SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTP 136 (156)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCH
T ss_pred --------CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCH
Confidence 799999999999999999999999999999999999999999999999999999985 8899999999999
Q ss_pred HHHHHHcCcHHHHHHHHhc
Q psy12892 179 LHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 179 l~~a~~~~~~~~~~~Ll~~ 197 (315)
|++|+..++.+++++|+++
T Consensus 137 l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 137 LELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHcCcHHHHHHHHhh
Confidence 9999999999999999874
No 65
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2e-31 Score=198.74 Aligned_cols=159 Identities=24% Similarity=0.307 Sum_probs=147.0
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHc-CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 16 TTINGDTALHLAARKRDLDMVRILVDY-GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 16 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.|..|.||||.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---------- 73 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK---------- 73 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC----------
Confidence 467889999999999999999999984 667778888999999999999999999999999999988876
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccC
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKE 174 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 174 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..+..
T Consensus 74 ------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~ 140 (165)
T 3twr_A 74 ------------GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQH-GADPTKKNRD 140 (165)
T ss_dssp ------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTT
T ss_pred ------------CCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccCCC
Confidence 789999999999999999999999999999999999999999999999999999996 9999999999
Q ss_pred CccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 175 NYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 175 ~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
|.||+++|+. ++.+++++|++.+
T Consensus 141 g~t~l~~a~~-~~~~i~~~L~~~g 163 (165)
T 3twr_A 141 GNTPLDLVKD-GDTDIQDLLRGDA 163 (165)
T ss_dssp SCCTGGGSCT-TCHHHHHHHHTC-
T ss_pred CCChhHhHhc-CChHHHHHHhhcc
Confidence 9999999877 8889999998765
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=3.9e-31 Score=213.51 Aligned_cols=175 Identities=22% Similarity=0.248 Sum_probs=139.5
Q ss_pred ccccCCCcHHHHHHHc---CCHHHHHHHHHcCCcc-------cc----cCCCCChHHHHHHhcCCHHHHHHHHhccCCCc
Q psy12892 15 ATTINGDTALHLAARK---RDLDMVRILVDYGTSV-------DI----QNGEGQTALHIASAEGDEALVKYFYGAKANAS 80 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~-------~~----~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~ 80 (315)
.+|..|.||||+|+.. |+.+++++|+++|+++ +. .|..|.||||+|+..|+.+++++|+++|++++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~ 128 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ 128 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 4588999999999987 9999999999998752 32 56789999999999999999999999999998
Q ss_pred cccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh---CCCCcccCCCCCCcHHHHHHHcCC----
Q psy12892 81 ITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG---AKANASITDHQDRTPMHLAAENGH---- 153 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~~~~l~~a~~~~~---- 153 (315)
..+........ .....+..|.||||+|+..|+.+++++|++ .|++++..+..|.||||+|+..|+
T Consensus 129 ~~~~~~~~~~~--------~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~ 200 (273)
T 2pnn_A 129 AAANGDFFKKT--------KGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVD 200 (273)
T ss_dssp CCBCSGGGSSC--------SSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHH
T ss_pred ccccccccccc--------cccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchh
Confidence 87752110000 000001158999999999999999999999 999999999999999999999988
Q ss_pred -----HHHHHHHHHhcCccccc-------cccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 154 -----ASIIELLADKFRASIFE-------RTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 154 -----~~~~~~Ll~~~~~~~~~-------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
.+++++|++. |++++. .+..|.||||+|+..|+.+++++|+++|
T Consensus 201 ~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 256 (273)
T 2pnn_A 201 NTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQRE 256 (273)
T ss_dssp HHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCC
Confidence 7999999996 888864 5556666666666666666666665554
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.1e-30 Score=199.73 Aligned_cols=155 Identities=21% Similarity=0.291 Sum_probs=147.9
Q ss_pred ccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHH
Q psy12892 46 VDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVK 125 (315)
Q Consensus 46 ~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~ 125 (315)
++..|..|.||||+|+..|+.+++++|++++++++..+. .|.||||+|+..++.++++
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~ 85 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDI----------------------EGSTALIWAVKNNRLGIAE 85 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccc----------------------cCccHHHHHHHcCCHHHHH
Confidence 566889999999999999999999999999999888776 7999999999999999999
Q ss_pred HHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------C
Q psy12892 126 YFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------G 199 (315)
Q Consensus 126 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~ 199 (315)
+|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..++.+++++|++.+ +
T Consensus 86 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 86 KLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEH-GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 99999999999999999999999999999999999996 9999999999999999999999999999999887 6
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHh
Q psy12892 200 IENYNVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 200 ~~~~~~l~~A~~~~~~~~~~~Ll~ 223 (315)
..|.||+++|+..++.+++++|++
T Consensus 165 ~~g~t~l~~A~~~~~~~~v~~Ll~ 188 (192)
T 2rfm_A 165 LTGLTAEASARIFGRQEVIKIFTE 188 (192)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHh
Confidence 678999999999999999999998
No 68
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.6e-31 Score=198.15 Aligned_cols=163 Identities=18% Similarity=0.175 Sum_probs=146.8
Q ss_pred CChHHHHHHhcCCHHHHHHHHhCCCC-cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcC
Q psy12892 108 GQTALHIASAEGDEALVKYFYGAKAN-ASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYS 186 (315)
Q Consensus 108 ~~~~l~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~ 186 (315)
+.+|||.|+..|+.+++++|++.+.. ++..+..|.||||+|+..|+.+++++|++. |++++..+..+.||||+|+..+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCC
Confidence 35899999999999999999999887 788899999999999999999999999997 9999999999999999999999
Q ss_pred cHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhh
Q psy12892 187 REDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISK 260 (315)
Q Consensus 187 ~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (315)
+.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.. +..
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~~ 134 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTE-------------------------ADS 134 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCC-------------------------CTT
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccc-------------------------CCC
Confidence 999999999877 6678999999999999999999999 99999885 678
Q ss_pred cCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCCcee
Q psy12892 261 QQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDGTLI 300 (315)
Q Consensus 261 ~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g~t~ 300 (315)
|.||||+|+.. ++.+++++|+++|+++..++..|.||
T Consensus 135 g~t~l~~A~~~---~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 135 GYTPMDLAVAL---GYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp SCCHHHHHHHH---TCHHHHHHHHHHHHHHSCC-------
T ss_pred CCCHHHHHHHh---CcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 99999999999 99999999999999999999988887
No 69
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=9.4e-31 Score=197.73 Aligned_cols=158 Identities=20% Similarity=0.222 Sum_probs=140.8
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHHHc-CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhh
Q psy12892 18 INGDTALHLAARKRDLDMVRILVDY-GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 18 ~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 96 (315)
..+.++|+.||..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~------------ 70 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR------------ 70 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC------------
Confidence 4678999999999999999999998 677999999999999999999999999999999999988776
Q ss_pred hhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCc
Q psy12892 97 SVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENY 176 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 176 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.
T Consensus 71 ----------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~ 139 (179)
T 3f6q_A 71 ----------GDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN-GALVSICNKYGE 139 (179)
T ss_dssp ----------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSSBCCTTSC
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcchhccCCC
Confidence 789999999999999999999999999999999999999999999999999999996 999998888888
Q ss_pred cHHHHHHHcCcHHHHHHHHhcC
Q psy12892 177 NVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 177 ~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
||+++|+..++.+++++|++.+
T Consensus 140 tpl~~A~~~~~~~~~~~L~~~g 161 (179)
T 3f6q_A 140 MPVDKAKAPLRELLRERAEKMG 161 (179)
T ss_dssp CGGGGSCHHHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHHHHHHHHhh
Confidence 8888887776666666666554
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=2.5e-33 Score=219.68 Aligned_cols=192 Identities=21% Similarity=0.143 Sum_probs=160.5
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHH
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIA 92 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 92 (315)
.+..+.+|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 14 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~-------- 85 (229)
T 2vge_A 14 ARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDS-------- 85 (229)
T ss_dssp CCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred ccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--------
Confidence 456667788889999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCC-CCCCcHHHHH--HHcCCHHHHHHHHHhcCcccc
Q psy12892 93 AAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITD-HQDRTPMHLA--AENGHASIIELLADKFRASIF 169 (315)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~~l~~a--~~~~~~~~~~~Ll~~~~~~~~ 169 (315)
.|.||||+|+..|+.+++++|++.|++++..+ ..|.|||++| +..|+.+++++|++. |++++
T Consensus 86 --------------~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~-ga~~~ 150 (229)
T 2vge_A 86 --------------HGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV-EQSMG 150 (229)
T ss_dssp --------------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH-HHHTT
T ss_pred --------------CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc-CCCcc
Confidence 78899999999999999999999999999886 6899999999 899999999999996 88888
Q ss_pred ccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhh
Q psy12892 170 ERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQ 249 (315)
Q Consensus 170 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (315)
..+..+.++++.++... ..++|++ .|.+++...
T Consensus 151 ~~~~~~~~~l~~~~~~~------------------------------~~~~ll~-~ga~~~~~~---------------- 183 (229)
T 2vge_A 151 LMNSGAVYALWDYSAEF------------------------------GDELSFR-EGESVTVLR---------------- 183 (229)
T ss_dssp TSGGGEEEESSCBCCSS------------------------------TTBCCBC-TTCEEEEEE----------------
T ss_pred cccCCchHHHHHHhhcc------------------------------ccccCcc-ccccccccc----------------
Confidence 88877777765432221 1146676 788843221
Q ss_pred hhhHHHHHhhhcCCcceeeeccCCCCcHHHHHHHH
Q psy12892 250 AYLYQVYLISKQQTAVHLVCSRQTGTATSILRALL 284 (315)
Q Consensus 250 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i~~Ll 284 (315)
++..|+||||+|+.. |+.++|+.++
T Consensus 184 -------~d~~G~TpL~~A~~~---g~~~~v~~~~ 208 (229)
T 2vge_A 184 -------RDGPEETDWWWAALH---GQEGYVPRNY 208 (229)
T ss_dssp -------SSCTTCSSEEEEEET---TEEEEEEGGG
T ss_pred -------cCCCcccHHHHHHHc---CCcceeehhh
Confidence 367899999999999 9988887643
No 71
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.9e-30 Score=191.14 Aligned_cols=152 Identities=24% Similarity=0.312 Sum_probs=141.7
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
...||||.|+..|+.+++++|+++|++++..+. .|.||||+|+. |+.+++++|++.|
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~----------------------~g~t~L~~A~~-~~~~~v~~Ll~~g 60 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNG----------------------FGRTALQVMKL-GNPEIARRLLLRG 60 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCT----------------------TSCCHHHHCCS-SCHHHHHHHHHTT
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCc----------------------cCccHHHHHHc-CcHHHHHHHHHcC
Confidence 456999999999999999999999999988776 79999999999 9999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-------CCCCCc
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK-------GIENYN 204 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-------~~~~~~ 204 (315)
.+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..++.+++++|++.+ +..|.|
T Consensus 61 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t 139 (162)
T 1ihb_A 61 ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEF-QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDT 139 (162)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCc
Confidence 99999999999999999999999999999996 9999999999999999999999999999999876 446899
Q ss_pred HHHHHHHcCCHHHHHHHHhccCCc
Q psy12892 205 VLHLAAMYSREDVVKLLLNKKGIN 228 (315)
Q Consensus 205 ~l~~A~~~~~~~~~~~Ll~~~~~~ 228 (315)
|||+|+..++.+++++|++ +|+|
T Consensus 140 ~l~~A~~~~~~~~~~~Ll~-~GAd 162 (162)
T 1ihb_A 140 ACDLARLYGRNEVVSLMQA-NGAG 162 (162)
T ss_dssp HHHHHHHTTCHHHHHHHHH-TC--
T ss_pred HHHHHHHcCCHHHHHHHHH-hCCC
Confidence 9999999999999999999 8875
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=8.2e-30 Score=190.37 Aligned_cols=155 Identities=21% Similarity=0.266 Sum_probs=145.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
.|.||||.|+..|+.+++++|++.+++++..+. .|.||||+|+..|+.+++++|++.|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~~g 59 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDE----------------------EGFTPLMWAAAHGQIAVVEFLLQNG 59 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCC----------------------CCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 578999999999999999999999999888776 7999999999999999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcH
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNV 205 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~ 205 (315)
++++..+..|.||||+|+..|+.+++++|++. +++++..+..|.||||+|+..++.+++++|++.+ +..|.||
T Consensus 60 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 60 ADPQLLGKGRESALSLACSKGYTDIVKMLLDC-GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNS 138 (167)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999999999999999999999999997 9999999999999999999999999999999876 6678999
Q ss_pred HHHHHHcCCHHHHHHHHhccCCccc
Q psy12892 206 LHLAAMYSREDVVKLLLNKKGINVA 230 (315)
Q Consensus 206 l~~A~~~~~~~~~~~Ll~~~~~~~~ 230 (315)
+++|+..++.+++++|++ ++.+..
T Consensus 139 l~~A~~~~~~~~~~~L~~-~~~~~~ 162 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIES-HLLKLL 162 (167)
T ss_dssp HHHHHHHTCHHHHHHHHH-HHHHHC
T ss_pred HHHHHHcCcHHHHHHHHH-HHHHHH
Confidence 999999999999999998 665543
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.9e-29 Score=188.74 Aligned_cols=153 Identities=26% Similarity=0.371 Sum_probs=142.9
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
...+.++|+.|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~ 68 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDA----------------------SGWTPLHLAAFNGHLEIVEVLLK 68 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCC----------------------CCCCHHHHHHHcCCHHHHHHHHH
Confidence 34567899999999999999999999999988776 78999999999999999999999
Q ss_pred CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCC
Q psy12892 130 AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENY 203 (315)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~ 203 (315)
.|.+++..+..|.||||+|+..|+.+++++|++. +++++..+..|.||||+|+..++.+++++|++.+ +..|.
T Consensus 69 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 69 NGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK 147 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999999999999999996 9999999999999999999999999999999987 56799
Q ss_pred cHHHHHHHcCCHHHHHHHHhccC
Q psy12892 204 NVLHLAAMYSREDVVKLLLNKKG 226 (315)
Q Consensus 204 ~~l~~A~~~~~~~~~~~Ll~~~~ 226 (315)
|||++|+..++.+++++|++ .|
T Consensus 148 t~l~~A~~~~~~~~~~~L~~-~G 169 (169)
T 2y1l_E 148 TAFDISIDNGNEDLAEILQK-LN 169 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHT-C-
T ss_pred CHHHHHHHhCCHHHHHHHHH-cC
Confidence 99999999999999999998 54
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=5.6e-31 Score=208.18 Aligned_cols=174 Identities=22% Similarity=0.241 Sum_probs=124.8
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhh
Q psy12892 17 TINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 96 (315)
+..|.||||.|++.|+.+.++.|+++|++++. +..|.||||.|+..|+.+++++|++.|++++..+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~------------ 68 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND------------ 68 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT------------
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC------------
Confidence 45799999999999999999999999999985 47889999999999999999999999999988876
Q ss_pred hhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCc
Q psy12892 97 SVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENY 176 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 176 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..+.
T Consensus 69 ----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~ 137 (239)
T 1ycs_B 69 ----------EGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVES-GAAVFAMTYSDM 137 (239)
T ss_dssp ----------TSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSSC
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcceecCCCC
Confidence 799999999999999999999999999999999999999999999999999999996 999999998777
Q ss_pred -cHHHHH--HHcCcHHHHHHHHhcC---------------CCCCCcHHHHHHHcCC
Q psy12892 177 -NVLHLA--AMYSREDVVKLLLNKK---------------GIENYNVLHLAAMYSR 214 (315)
Q Consensus 177 -~~l~~a--~~~~~~~~~~~Ll~~~---------------~~~~~~~l~~A~~~~~ 214 (315)
||+++| +..|+.+++++|++.+ +..+.++++++...|.
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred cchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 999999 7888999999999765 3345566665555544
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3e-29 Score=189.44 Aligned_cols=161 Identities=20% Similarity=0.253 Sum_probs=148.7
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhC-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHc
Q psy12892 107 EGQTALHIASAEGDEALVKYFYGA-KANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMY 185 (315)
Q Consensus 107 ~~~~~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~ 185 (315)
.+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHc
Confidence 567899999999999999999987 667889999999999999999999999999997 999999999999999999999
Q ss_pred CcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhh
Q psy12892 186 SREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLIS 259 (315)
Q Consensus 186 ~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (315)
++.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.. +.
T Consensus 83 ~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~ 136 (179)
T 3f6q_A 83 GHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSIC-------------------------NK 136 (179)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBC-------------------------CT
T ss_pred CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchh-------------------------cc
Confidence 9999999999887 6678999999999999999999999 99999985 77
Q ss_pred hcCCcceeeeccCCCCcHHHHHHHHhhccceeeeccCC
Q psy12892 260 KQQTAVHLVCSRQTGTATSILRALLSTAGREIRMTVDG 297 (315)
Q Consensus 260 ~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~~~~~~~~~g 297 (315)
.|.|||++|+.. ++.+++++|+++|++++..+..+
T Consensus 137 ~g~tpl~~A~~~---~~~~~~~~L~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 137 YGEMPVDKAKAP---LRELLRERAEKMGQNLNRIPYKD 171 (179)
T ss_dssp TSCCGGGGSCHH---HHHHHHHHHHHTTCCCSCBCCCC
T ss_pred CCCCcHHHHHHH---HHHHHHHHHHHhhcCcccCCccc
Confidence 899999999999 99999999999999999776554
No 76
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.5e-31 Score=211.51 Aligned_cols=215 Identities=13% Similarity=0.093 Sum_probs=149.8
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
+..|.||||.|+..++.++++.|+++|++++... .+.||||.|+..|+.+++++|++
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~-----------------------~~~t~L~~A~~~g~~~~v~~Ll~ 58 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNP-----------------------LPLALLLDSSLEGEFDLVQRIIY 58 (239)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHHTCHHHHHHHTS
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCc-----------------------hhhHHHHHHHHcCCHHHHHHHHH
Confidence 3568999999999999999999999999987642 68899999999999999999999
Q ss_pred CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCC
Q psy12892 130 AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENY 203 (315)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~ 203 (315)
.|++++..+..|.||||+|+..|+.+++++|++. |++++..+..|+||||+|+..|+.+++++|++++ +..+.
T Consensus 59 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~ 137 (239)
T 1ycs_B 59 EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM 137 (239)
T ss_dssp TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSC
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCC
Confidence 9999999999999999999999999999999997 9999999999999999999999999999999987 33444
Q ss_pred -cHHHHH--HHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhhhcCCcceeeeccCCCCcHHHH
Q psy12892 204 -NVLHLA--AMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLISKQQTAVHLVCSRQTGTATSIL 280 (315)
Q Consensus 204 -~~l~~A--~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~i 280 (315)
||||.| +..++.+++++|++ .|++++..+...... + .+..+.++++++... |. ++
T Consensus 138 ~t~l~~a~~~~~g~~~~~~~Ll~-~~a~~~~~~~~~~~a--------l--------~d~~~~~~~eLa~~~---G~--~i 195 (239)
T 1ycs_B 138 QTAADKCEEMEEGYTQCSQFLYG-VQEKMGIMNKGVIYA--------L--------WDYEPQNDDELPMKE---GD--CM 195 (239)
T ss_dssp CCHHHHCCSSSTTCCCHHHHHHH-HHHHTTTTGGGEEEE--------S--------SCBCCSSTTBCCBCS---SC--EE
T ss_pred cchHHHHHHhhhccHHHHHHHHH-hhhcccccccceEEE--------E--------eccCCCCCCcccccC---CC--EE
Confidence 999999 78899999999999 899888753211100 0 145678999999998 65 56
Q ss_pred HHHHhhccc------eeeeccCCceeEEEeecCchh
Q psy12892 281 RALLSTAGR------EIRMTVDGTLILYYRGKDSKA 310 (315)
Q Consensus 281 ~~Ll~~g~~------~~~~~~~g~t~l~~A~~~~~~ 310 (315)
++|.+.+.+ ....+..|.+|..|.......
T Consensus 196 ~vl~~~~~~~~~Ww~~~~~~~~G~~P~~yv~~~~~~ 231 (239)
T 1ycs_B 196 TIIHREDEDEIEWWWARLNDKEGYVPRNLLGLYPRI 231 (239)
T ss_dssp EECCCCTTSCSSEEEEEETTEEEEEEGGGEECCC--
T ss_pred EEEEecCCCCCCEEEEEECCcEEEeehHHeeECCcC
Confidence 667666655 235566788888887765443
No 77
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.2e-29 Score=182.68 Aligned_cols=133 Identities=22% Similarity=0.275 Sum_probs=125.3
Q ss_pred hhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhH
Q psy12892 11 EQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRD 90 (315)
Q Consensus 11 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 90 (315)
.+++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+. |+.+++++|+++|++++..+.
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~------ 75 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADP------ 75 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBT------
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCC------
Confidence 4688999999999999999999999999999999999999999999999999 999999999999999988876
Q ss_pred HHhhhhhhHHhhhhccC-CChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcc
Q psy12892 91 IAAAGTSVLANCLLMGE-GQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRAS 167 (315)
Q Consensus 91 ~~~~~~~~~~~~~~~~~-~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 167 (315)
. |.||||+|+..++.+++++|++.|++++..+..|.|||++|+..|+.+++++|+++ |++
T Consensus 76 ----------------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-Gad 136 (136)
T 1d9s_A 76 ----------------ATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA-TGD 136 (136)
T ss_dssp ----------------TTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH-HCC
T ss_pred ----------------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCC
Confidence 5 89999999999999999999999999999999999999999999999999999986 653
No 78
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-28 Score=180.87 Aligned_cols=145 Identities=25% Similarity=0.346 Sum_probs=136.3
Q ss_pred CChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCC
Q psy12892 53 GQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKA 132 (315)
Q Consensus 53 g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~ 132 (315)
..++|+.|+..|+.+++++|+++|++++. +. .|.||||+|+..|+.+++++|++.|.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~~-~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~ 58 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFTT-DW----------------------LGTSPLHLAAQYGHFSTTEVLLRAGV 58 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCCC-CT----------------------TCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCCc-CC----------------------CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 35899999999999999999999998763 22 78999999999999999999999999
Q ss_pred CcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHH
Q psy12892 133 NASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVL 206 (315)
Q Consensus 133 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l 206 (315)
+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..++.+++++|++.+ +..|.|||
T Consensus 59 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 137 (153)
T 1awc_B 59 SRDARTKVDRTPLHMAASEGHANIVEVLLKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAF 137 (153)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCCCCCCHHHHHHHcChHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 9999999999999999999999999999996 9999999999999999999999999999999887 66789999
Q ss_pred HHHHHcCCHHHHHHH
Q psy12892 207 HLAAMYSREDVVKLL 221 (315)
Q Consensus 207 ~~A~~~~~~~~~~~L 221 (315)
++|+..++.+++++|
T Consensus 138 ~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 138 DISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHTTCHHHHHHH
T ss_pred HHHHHcCCHHHHHHh
Confidence 999999999999987
No 79
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.5e-31 Score=223.28 Aligned_cols=158 Identities=15% Similarity=0.142 Sum_probs=129.8
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcc---cccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhh
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSV---DIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
+..++.++.||||+|++.|+.++|++|+++|+.. +..+..|.||||+|+..|+.+++++|+++|+++...+...
T Consensus 85 l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~--- 161 (376)
T 2aja_A 85 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA--- 161 (376)
T ss_dssp HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH---
T ss_pred HHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC---
Confidence 4556677889999999999999999999999832 2334567899999999999999999999998643221110
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCccc--CCCCCCcHHHHHH-HcCCHHHHHHHHHhcCc
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASI--TDHQDRTPMHLAA-ENGHASIIELLADKFRA 166 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~~l~~a~-~~~~~~~~~~Ll~~~~~ 166 (315)
.+.||||+|+..|+.+++++|++.|++++. .+..|.||||+|+ ..|+.+++++|++. |.
T Consensus 162 -----------------~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-ga 223 (376)
T 2aja_A 162 -----------------ENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDC-PV 223 (376)
T ss_dssp -----------------HHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-HH
T ss_pred -----------------CCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-CC
Confidence 126999999999999999999999999877 7888999999999 99999999999985 53
Q ss_pred cccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 167 SIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 167 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
. +.||+++|+..|+.+++++|++.+
T Consensus 224 ~-------~~taL~~Aa~~g~~evv~lL~~~g 248 (376)
T 2aja_A 224 M-------LAYAEIHEFEYGEKYVNPFIARHV 248 (376)
T ss_dssp H-------HHHHHHCTTTTTTTTHHHHHHHHH
T ss_pred c-------cchHHHHHHHCCCHHHHHHHHhcC
Confidence 2 689999999999999999998654
No 80
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=1.8e-29 Score=186.20 Aligned_cols=146 Identities=19% Similarity=0.217 Sum_probs=119.7
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHH
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIA 92 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 92 (315)
.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..+.
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-------- 75 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-------- 75 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT--------
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC--------
Confidence 5667889999999999999999999999999999999999999999985 8999999999999999998876
Q ss_pred hhhhhhHHhhhhccCCCh-HHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q psy12892 93 AAGTSVLANCLLMGEGQT-ALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER 171 (315)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~-~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 171 (315)
.|.| |||+|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++ |++++..
T Consensus 76 --------------~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~-ga~~~~~ 140 (156)
T 1bi7_B 76 --------------ATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAA-AGGTRGS 140 (156)
T ss_dssp --------------TTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSC-C------
T ss_pred --------------CCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHc-CCCCCcc
Confidence 6888 99999999999999999999999999999999999999999999999999996 9999999
Q ss_pred ccCCccHHHHH
Q psy12892 172 TKENYNVLHLA 182 (315)
Q Consensus 172 ~~~~~~~l~~a 182 (315)
+..|.++.+.+
T Consensus 141 ~~~g~t~~~~~ 151 (156)
T 1bi7_B 141 NHARIDAAEGP 151 (156)
T ss_dssp -----------
T ss_pred CcCcCcccccC
Confidence 99998887644
No 81
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=3.7e-28 Score=180.97 Aligned_cols=151 Identities=27% Similarity=0.348 Sum_probs=137.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHh-CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHc
Q psy12892 107 EGQTALHIASAEGDEALVKYFYG-AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMY 185 (315)
Q Consensus 107 ~~~~~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~ 185 (315)
.+.+||+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++. +.+++..+..|.||||+|+..
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~ 85 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNACSY 85 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHT
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHc
Confidence 57799999999999999999997 5567777888899999999999999999999996 999999999999999999999
Q ss_pred CcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCccccCCCCCCCCCCccccchhhhhhHHHHHhh
Q psy12892 186 SREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDLTVGPVQAYLYQVYLIS 259 (315)
Q Consensus 186 ~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (315)
++.+++++|++.+ +..|.||||+|+..++.+++++|++ .|++++.+ +.
T Consensus 86 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~-------------------------~~ 139 (165)
T 3twr_A 86 GHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKK-------------------------NR 139 (165)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCC-------------------------CT
T ss_pred CcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccc-------------------------CC
Confidence 9999999999887 6678999999999999999999999 99999985 78
Q ss_pred hcCCcceeeeccCCCCcHHHHHHHHhhcc
Q psy12892 260 KQQTAVHLVCSRQTGTATSILRALLSTAG 288 (315)
Q Consensus 260 ~~~t~L~~A~~~~~~~~~~~i~~Ll~~g~ 288 (315)
.|.||||+|+. ++.+++++|+++|+
T Consensus 140 ~g~t~l~~a~~----~~~~i~~~L~~~gA 164 (165)
T 3twr_A 140 DGNTPLDLVKD----GDTDIQDLLRGDAA 164 (165)
T ss_dssp TSCCTGGGSCT----TCHHHHHHHHTC--
T ss_pred CCCChhHhHhc----CChHHHHHHhhccc
Confidence 89999999765 47899999999986
No 82
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.2e-27 Score=176.58 Aligned_cols=147 Identities=22% Similarity=0.280 Sum_probs=136.5
Q ss_pred CChHHHHHHhcCCHHHHHHHHhc-cCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 53 GQTALHIASAEGDEALVKYFYGA-KANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 53 g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
+.|||+.|+..|+.+++++|++. +.+++..+. .|.||||+ +..|+.+++++|++.|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~----------------------~g~t~L~~-~~~~~~~~v~~Ll~~g 58 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNR----------------------FGKTALQV-MMFGSTAIALELLKQG 58 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCT----------------------TSCCHHHH-SCTTCHHHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCC----------------------CCCcHHHH-HHcCCHHHHHHHHHCC
Confidence 45899999999999999999988 336666665 79999999 9999999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC-----CCCCCcHH
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK-----GIENYNVL 206 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~-----~~~~~~~l 206 (315)
++++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||||+|+..|+.+++++|++.. +..|.|||
T Consensus 59 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l 137 (156)
T 1bd8_A 59 ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH-GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPL 137 (156)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHH
T ss_pred CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHH
Confidence 99999999999999999999999999999996 9999999999999999999999999999999653 66789999
Q ss_pred HHHHHcCCHHHHHHHHh
Q psy12892 207 HLAAMYSREDVVKLLLN 223 (315)
Q Consensus 207 ~~A~~~~~~~~~~~Ll~ 223 (315)
++|+..++.+++++|++
T Consensus 138 ~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 138 ELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHSCCHHHHHHHHT
T ss_pred HHHHHcCcHHHHHHHHh
Confidence 99999999999999997
No 83
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=3.2e-27 Score=167.71 Aligned_cols=126 Identities=39% Similarity=0.655 Sum_probs=119.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
+|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-------------- 66 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-------------- 66 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC--------------
Confidence 589999999999999999999999999999999999999999999999999999999999888776
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcc
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRAS 167 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~ 167 (315)
.|.||||+|+..++.+++++|++.|.+++..+..|.||+++|+..|+.+++++|+++ |++
T Consensus 67 --------~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-Gad 126 (126)
T 1n0r_A 67 --------NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GAY 126 (126)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCC
T ss_pred --------CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCC
Confidence 789999999999999999999999999999999999999999999999999999986 653
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=2.2e-27 Score=170.80 Aligned_cols=127 Identities=26% Similarity=0.340 Sum_probs=116.8
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.....|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~---------- 78 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDA---------- 78 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC----------
Confidence 3456789999999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.|||++|+..|+.+++++|++.
T Consensus 79 ------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 79 ------------IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp ------------TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred ------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 789999999999999999999999999999999999999999999999999999874
No 85
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.7e-27 Score=171.47 Aligned_cols=132 Identities=17% Similarity=0.228 Sum_probs=124.6
Q ss_pred CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHH
Q psy12892 43 GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEA 122 (315)
Q Consensus 43 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~ 122 (315)
+++++..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+. ++.+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~-~~~~ 58 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNR----------------------FGRRPIQVMMM-GSAQ 58 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----------------------TCCTTTTTSTT-SCHH
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCC----------------------CCCCHHHHHHc-CCHH
Confidence 568888999999999999999999999999999999988776 79999999999 9999
Q ss_pred HHHHHHhCCCCcccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 123 LVKYFYGAKANASITDHQ-DRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 123 ~v~~Ll~~~~~~~~~~~~-~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
++++|++.|++++..+.. |.||||+|+..|+.+++++|++. |++++..+..|.|||++|+..++.+++++|+++|
T Consensus 59 ~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 59 VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 999999999999999999 99999999999999999999996 9999999999999999999999999999998865
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3.7e-28 Score=183.66 Aligned_cols=155 Identities=12% Similarity=0.079 Sum_probs=138.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccC-CCCChHHHHHHhcCCH----HHHHHHHhccCCCccccccchhhHHHh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQN-GEGQTALHIASAEGDE----ALVKYFYGAKANASITDHQGIQRDIAA 93 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 93 (315)
.+.++|+.|++.|+++.++.+++.+.+. .+ ..|.||||+|+..++. +++++|+++|++++..+.
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~--------- 73 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK--------- 73 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT---------
T ss_pred ccccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC---------
Confidence 4578999999999999999999987643 44 6799999999999975 599999999999999886
Q ss_pred hhhhhHHhhhhccCCChHHHHHHhcCC------HHHHHHHHhCCCCcccCCCCCC-cHHHHHHHcC-----CHHHHHHHH
Q psy12892 94 AGTSVLANCLLMGEGQTALHIASAEGD------EALVKYFYGAKANASITDHQDR-TPMHLAAENG-----HASIIELLA 161 (315)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~A~~~~~------~~~v~~Ll~~~~~~~~~~~~~~-~~l~~a~~~~-----~~~~~~~Ll 161 (315)
.|.||||+|+..++ .+++++|++.|++++.+|..|. ||||+|+..+ +.+++++|+
T Consensus 74 -------------~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll 140 (186)
T 3t8k_A 74 -------------EGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIF 140 (186)
T ss_dssp -------------TCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHH
T ss_pred -------------CCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHH
Confidence 79999999999886 5789999999999999999999 9999999954 456999999
Q ss_pred HhcCccccccccCCccHHHHHHHcCcHHHHHHHHhc
Q psy12892 162 DKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 162 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
+..|++++..+..|.||||+|+..++.+++++|.+.
T Consensus 141 ~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 141 SQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp TSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHH
T ss_pred HhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 833999999999999999999999999999999864
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=6.4e-27 Score=176.88 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=121.1
Q ss_pred hccccc-cCCCcHHHHHHHcCCH----HHHHHHHHcCCcccccCCCCChHHHHHHhcCC------HHHHHHHHhccCCCc
Q psy12892 12 QLKATT-INGDTALHLAARKRDL----DMVRILVDYGTSVDIQNGEGQTALHIASAEGD------EALVKYFYGAKANAS 80 (315)
Q Consensus 12 ~~~~~~-~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~------~~~v~~Ll~~~~~~~ 80 (315)
.++.++ ..|.||||+|+..|+. +++++|+++|++++..|..|.||||+|+..++ .+++++|+++|++++
T Consensus 29 ~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin 108 (186)
T 3t8k_A 29 GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT 108 (186)
T ss_dssp SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS
T ss_pred CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC
Confidence 356666 7899999999999975 59999999999999999999999999999987 678999999999999
Q ss_pred cccccchhhHHHhhhhhhHHhhhhccCCC-hHHHHHHhcC-----CHHHHHHHHh-CCCCcccCCCCCCcHHHHHHHcCC
Q psy12892 81 ITDHQGIQRDIAAAGTSVLANCLLMGEGQ-TALHIASAEG-----DEALVKYFYG-AKANASITDHQDRTPMHLAAENGH 153 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~A~~~~-----~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~~ 153 (315)
..+. .|. ||||+|+..+ ..+++++|++ .|++++..|..|.||||+|++.|+
T Consensus 109 ~~d~----------------------~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 109 ALYK----------------------PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166 (186)
T ss_dssp SCBG----------------------GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTC
T ss_pred ccCC----------------------CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCC
Confidence 9887 688 9999999954 3569999999 999999999999999999999999
Q ss_pred HHHHHHHHHhcCccccc
Q psy12892 154 ASIIELLADKFRASIFE 170 (315)
Q Consensus 154 ~~~~~~Ll~~~~~~~~~ 170 (315)
.+++++|.+. ....+.
T Consensus 167 ~~~v~~L~~~-~~~~~~ 182 (186)
T 3t8k_A 167 PIALKMMEDY-IKKYNL 182 (186)
T ss_dssp HHHHHHHHHH-HHHHTC
T ss_pred HHHHHHHHHH-HHHHhc
Confidence 9999999974 444433
No 88
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=1.2e-26 Score=175.72 Aligned_cols=143 Identities=24% Similarity=0.286 Sum_probs=125.8
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
..+..|.||||+|+..|+.+++++|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~--------- 108 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMR--------- 108 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSS---------
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC---------
Confidence 346789999999999999999999999 9999999999999999999999999999999999999877732
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccC
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKE 174 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~ 174 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|++.++. ..
T Consensus 109 ------------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~ 158 (183)
T 3deo_A 109 ------------GGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TP 158 (183)
T ss_dssp ------------SSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CC
T ss_pred ------------CCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cc
Confidence 789999999999999999999999999999999999999999873321 23
Q ss_pred CccHHHHHHHcCcHHHHHHHHhc
Q psy12892 175 NYNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 175 ~~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
+.+++++|+..|..+++++|.++
T Consensus 159 ~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 159 KGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHcCHHHHHHHHHHh
Confidence 46788888888888888888754
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=2.4e-26 Score=181.95 Aligned_cols=142 Identities=25% Similarity=0.294 Sum_probs=113.5
Q ss_pred cccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhh
Q psy12892 16 TTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAG 95 (315)
Q Consensus 16 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 95 (315)
.+..|.||||+|+..|+.+++++|++ |++++..|..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~---------- 109 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMR---------- 109 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSS----------
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCC----------
Confidence 34578889999999999999998888 8888888888889999999989999999998888888777632
Q ss_pred hhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCC
Q psy12892 96 TSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKEN 175 (315)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 175 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..+. ...+
T Consensus 110 -----------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~ 160 (244)
T 3ui2_A 110 -----------GGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPK 160 (244)
T ss_dssp -----------SCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCC
T ss_pred -----------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCC
Confidence 68888888888888888888888888888888888888888875211 1235
Q ss_pred ccHHHHHHHcCcHHHHHHHHhc
Q psy12892 176 YNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 176 ~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
.+||++|+..|+.+++++|++.
T Consensus 161 ~~~l~~a~~~g~~~iv~~L~~~ 182 (244)
T 3ui2_A 161 GNPMQFGRRIGLEKVINVLEGQ 182 (244)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHh
Confidence 6677777777777777776653
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=8e-27 Score=168.15 Aligned_cols=127 Identities=24% Similarity=0.344 Sum_probs=112.8
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.+|..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~---------- 74 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGY---------- 74 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCG----------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCC----------
Confidence 5788999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||+++|+..+..+++++|.+.
T Consensus 75 ------------~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 75 ------------QNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp ------------GGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred ------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 688999999999999999999999999999999999999999888888888777653
No 91
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.7e-25 Score=160.86 Aligned_cols=126 Identities=25% Similarity=0.313 Sum_probs=115.7
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
...+.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~ 68 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDE----------------------YGLTPLYLATAHGHLEIVEVLLK 68 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCC----------------------CCCCHHHHHHHcCCHHHHHHHHH
Confidence 45677999999999999999999999999888776 78999999999999999999999
Q ss_pred CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 130 AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.|||++|+..++.+++++|++.|
T Consensus 69 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 69 NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999999999999999996 9999999999999999999999999999998764
No 92
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=7.5e-26 Score=166.77 Aligned_cols=128 Identities=20% Similarity=0.203 Sum_probs=112.9
Q ss_pred cccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHH
Q psy12892 47 DIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKY 126 (315)
Q Consensus 47 ~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~ 126 (315)
+..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+ .|+.+++++
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~-~~~~~~v~~ 62 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNS----------------------YGRRPIQVMM-MGSARVAEL 62 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS----------------------SSCCTTTSSC-TTCHHHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC----------------------CCCCHHHHHH-cCCHHHHHH
Confidence 34577889999999999999999999999999988776 7899999985 899999999
Q ss_pred HHhCCCCcccCCCCCCc-HHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 127 FYGAKANASITDHQDRT-PMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 127 Ll~~~~~~~~~~~~~~~-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
|++.|++++..+..|.| |||+|+..|+.+++++|+++ |++++..+..|.||||+|+..++.+++++|+++|
T Consensus 63 Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~g 134 (156)
T 1bi7_B 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134 (156)
T ss_dssp HHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcC
Confidence 99999999999999999 99999999999999999997 9999988888888888888888888888777766
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=6.2e-25 Score=155.83 Aligned_cols=124 Identities=38% Similarity=0.584 Sum_probs=112.9
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
+|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|++.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~~~~Ll~~g 58 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK----------------------NGRTPLHLAARNGHLEVVKLLLEAG 58 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT----------------------TSCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCC----------------------CCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 478999999999999999999999998887765 6889999999999999999999999
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
.+++..+..|.||||+|+..|+.+++++|+++ |.+++..+..|.||+++|+..++.+++++|+++|
T Consensus 59 ~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 59 ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred CCCcccCCCCCcHHHHHHHcChHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 99999999999999999999999999999996 9999888888999999999988888888888765
No 94
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=5.7e-27 Score=177.47 Aligned_cols=139 Identities=22% Similarity=0.257 Sum_probs=129.0
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
+..|.||||+|+..|+.+++++|++ +++++..+. .|.||||+|+..|+.+++++|++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~----------------------~g~t~L~~A~~~~~~~~v~~Ll~ 97 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDE----------------------NGRTALLFVAGLGSDKCVRLLAE 97 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT----------------------TSCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC----------------------CCCCHHHHHHHcCCHHHHHHHHH
Confidence 4578899999999999999999999 999888776 79999999999999999999999
Q ss_pred CCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCCcHHHH
Q psy12892 130 AKANASITD-HQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHL 208 (315)
Q Consensus 130 ~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~ 208 (315)
.|++++..+ ..|.||||+|+..|+.+++++|+++ |++++..+..|.|||++|+..++ ...+.++|++
T Consensus 98 ~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~-----------~~~~~~~l~~ 165 (183)
T 3deo_A 98 AGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTALELAREILK-----------TTPKGNPMQF 165 (183)
T ss_dssp TTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHHH-----------TCCCCSHHHH
T ss_pred cCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-CCCCcCCCCCCCCHHHHHHHhcc-----------CcccccHHHH
Confidence 999999988 8899999999999999999999997 99999999999999999998543 2457899999
Q ss_pred HHHcCCHHHHHHHHh
Q psy12892 209 AAMYSREDVVKLLLN 223 (315)
Q Consensus 209 A~~~~~~~~~~~Ll~ 223 (315)
|+..+..+++++|.+
T Consensus 166 a~~~~~~~i~~~L~~ 180 (183)
T 3deo_A 166 GRRIGLEKVINVLEG 180 (183)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHcCHHHHHHHHHH
Confidence 999999999999987
No 95
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=8.8e-26 Score=159.50 Aligned_cols=113 Identities=22% Similarity=0.262 Sum_probs=99.8
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhh
Q psy12892 17 TINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGT 96 (315)
Q Consensus 17 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 96 (315)
+..|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~------------ 71 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDK------------ 71 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT------------
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCC------------
Confidence 45788999999999999999999999999999999999999999999999999999999999888776
Q ss_pred hhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHc
Q psy12892 97 SVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAEN 151 (315)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~ 151 (315)
.|.||||+|+..++.+++++|++.|++++..+..|.||+++|...
T Consensus 72 ----------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 72 ----------HHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp ----------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCH
T ss_pred ----------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCH
Confidence 788999999999999999999999999999999999999998443
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=3.7e-26 Score=178.57 Aligned_cols=139 Identities=22% Similarity=0.290 Sum_probs=118.4
Q ss_pred ccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhc-cCCCccccccchhhHH
Q psy12892 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGA-KANASITDHQGIQRDI 91 (315)
Q Consensus 13 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~~~ 91 (315)
++..+..|.||||+||..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++ |++++..+.
T Consensus 66 v~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~------- 138 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNK------- 138 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCT-------
T ss_pred ccccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCC-------
Confidence 566788899999999999999999999999999999999999999999999999999999998 999988876
Q ss_pred HhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccccc
Q psy12892 92 AAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER 171 (315)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 171 (315)
.|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..|+.++++.|++. ++.....
T Consensus 139 ---------------~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~-~~~~~~~ 202 (222)
T 3ehr_A 139 ---------------LGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGT-DAVRTLS 202 (222)
T ss_dssp ---------------TSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred ---------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhcc-chhhhcc
Confidence 799999999999999999999999999999999999999999999999999999986 7766555
Q ss_pred ccC
Q psy12892 172 TKE 174 (315)
Q Consensus 172 ~~~ 174 (315)
+..
T Consensus 203 ~~~ 205 (222)
T 3ehr_A 203 NAE 205 (222)
T ss_dssp ---
T ss_pred chh
Confidence 443
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=7.8e-26 Score=162.96 Aligned_cols=131 Identities=31% Similarity=0.383 Sum_probs=118.0
Q ss_pred CCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHH
Q psy12892 43 GTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEA 122 (315)
Q Consensus 43 g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~ 122 (315)
|+|+ ..|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~ 57 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDH----------------------AGWTPLHEACNHGHLK 57 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT----------------------TSCCHHHHHHHTTCHH
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC----------------------CCCCHHHHHHHcCCHH
Confidence 5677 6789999999999999999999999999999988776 7899999999999999
Q ss_pred HHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhc
Q psy12892 123 LVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 123 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
++++|++.|.+++..+..|.||||+|+..|+.+++++|++. |++++..+..|.||+++|+..+..+++++|.+.
T Consensus 58 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 58 VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 99999999999999999999999999999999999999996 999999999999999999998888888777654
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=180.31 Aligned_cols=138 Identities=17% Similarity=0.138 Sum_probs=82.1
Q ss_pred ChHHHHHHhcCCHHHHHHHHhccCCCccc------cccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhc---CCHHHH
Q psy12892 54 QTALHIASAEGDEALVKYFYGAKANASIT------DHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAE---GDEALV 124 (315)
Q Consensus 54 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~---~~~~~v 124 (315)
.++|+.|+..|+.+.++.|++.|++++.. +. .|.||||+|+.. ++.+++
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~----------------------~g~t~Lh~A~~~~~~~~~~iv 209 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA----------------------PEELVLHLAVKVANQASLPLV 209 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCS----------------------CEECHHHHHHHTCCTTTHHHH
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCC----------------------CCccHHHHHHHhcccCcHHHH
Confidence 35566666666666666666666665542 22 456666666654 566666
Q ss_pred HHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCCc
Q psy12892 125 KYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYN 204 (315)
Q Consensus 125 ~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 204 (315)
++|++.|++++..|..|.||||+|+..|+.+++++|++. |++++..|..|.|||++|+..++.+++++|++.+...|.|
T Consensus 210 ~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~g~t 288 (301)
T 2b0o_E 210 DFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAF 288 (301)
T ss_dssp HHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHTTSS
T ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCC
Confidence 666666666666666666666666666666666666664 6666666666666666666666666666666666555666
Q ss_pred HHHHHHHcCC
Q psy12892 205 VLHLAAMYSR 214 (315)
Q Consensus 205 ~l~~A~~~~~ 214 (315)
|||+|+..|+
T Consensus 289 pLh~A~~~g~ 298 (301)
T 2b0o_E 289 PLHVDYSWVI 298 (301)
T ss_dssp CCC-------
T ss_pred hhHHHHhcCC
Confidence 6666666554
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=3.1e-24 Score=169.85 Aligned_cols=171 Identities=19% Similarity=0.196 Sum_probs=145.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
.+.+++.+++..|+.+.+..+...+.+++ ..|.||||+|+..|+.+++++|++ +++++..+.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~~~---~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-------------- 75 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-------------- 75 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHHHH---HHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCT--------------
T ss_pred CCccHHHHHHHcCCCcccccccccccccc---cCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCC--------------
Confidence 34555666666666555555444444433 568899999999999999999999 999888776
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCcc
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITD-HQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYN 177 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~ 177 (315)
.|.||||+|+..|+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++ |++++..+..|.|
T Consensus 76 --------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t 146 (244)
T 3ui2_A 76 --------NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLT 146 (244)
T ss_dssp --------TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCC
T ss_pred --------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCc
Confidence 79999999999999999999999999999988 7899999999999999999999997 9999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCCCCcHHHHHHHcCCHHHHHHHHhccCCc
Q psy12892 178 VLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGIN 228 (315)
Q Consensus 178 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~ 228 (315)
|||+|+..++ ...+.+||++|+..|+.+++++|++ .+.+
T Consensus 147 ~l~~A~~~~~-----------~~~~~~~l~~a~~~g~~~iv~~L~~-~~~~ 185 (244)
T 3ui2_A 147 ALELAREILK-----------TTPKGNPMQFGRRIGLEKVINVLEG-QVFE 185 (244)
T ss_dssp HHHHHHHHHT-----------TCCCSSHHHHHHHHHHHHHHHHHHH-HHEE
T ss_pred HHHHHHHHHh-----------ccCCCCHHHHHHHcChHHHHHHHHH-hccc
Confidence 9999986332 3568999999999999999999998 5444
No 100
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=4.5e-24 Score=173.67 Aligned_cols=90 Identities=19% Similarity=0.342 Sum_probs=79.6
Q ss_pred CCCCCCcHHHHHHHc---CCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC------CCCCCcHHH
Q psy12892 137 TDHQDRTPMHLAAEN---GHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK------GIENYNVLH 207 (315)
Q Consensus 137 ~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~ 207 (315)
.+..|.||||+|+.. |+.+++++|++. |++++..+..|+||||+|+..|+.+++++|++.+ +..|.|||+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 264 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 466788999999987 889999999996 8999999999999999999999999999999876 667889999
Q ss_pred HHHHcCCHHHHHHHHhccCCc
Q psy12892 208 LAAMYSREDVVKLLLNKKGIN 228 (315)
Q Consensus 208 ~A~~~~~~~~~~~Ll~~~~~~ 228 (315)
+|+..++.+++++|++ .|++
T Consensus 265 ~A~~~~~~~iv~~Ll~-~ga~ 284 (301)
T 2b0o_E 265 IARKKHHKECEELLEQ-AQAG 284 (301)
T ss_dssp HHHHHTCHHHHHHHHH-HHHH
T ss_pred HHHHcCCHHHHHHHHH-hcCC
Confidence 9999999999999998 7765
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=8e-24 Score=149.38 Aligned_cols=117 Identities=20% Similarity=0.237 Sum_probs=105.5
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 50 ~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..++.+++++|++
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~Ll~ 61 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLE----------------------GGRKPLHYAADCGQLEILEFLLL 61 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCT----------------------TSSCHHHHHHHTTCHHHHHHHHT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCC----------------------CCCcHHHHHHHcCCHHHHHHHHH
Confidence 46788999999999999999999999999888776 78999999999999999999999
Q ss_pred CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHH
Q psy12892 130 AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSRED 189 (315)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 189 (315)
.|++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.||+++|...+..+
T Consensus 62 ~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 62 KGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK-GADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 9999999999999999999999999999999996 9999999999999999995544333
No 102
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.90 E-value=3e-23 Score=138.73 Aligned_cols=93 Identities=38% Similarity=0.622 Sum_probs=87.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSV 98 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (315)
+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~-------------- 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK-------------- 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------------
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC--------------
Confidence 589999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCC
Q psy12892 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKAN 133 (315)
Q Consensus 99 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~ 133 (315)
.|.||||+|+..++.+++++|++.|++
T Consensus 67 --------~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 --------NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp --------TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred --------CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 799999999999999999999998864
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=3.8e-23 Score=171.88 Aligned_cols=126 Identities=24% Similarity=0.311 Sum_probs=105.9
Q ss_pred cccCCCcHHHHHHHc-CCHHHHHHHHHcCCcccccC--CCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHH
Q psy12892 16 TTINGDTALHLAARK-RDLDMVRILVDYGTSVDIQN--GEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIA 92 (315)
Q Consensus 16 ~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 92 (315)
.+.++.|+||.|+.. |+++++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~-------- 266 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADS-------- 266 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC--------
Confidence 334566788888888 88888888888888888777 7888888888888888888888888888887765
Q ss_pred hhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 93 AAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
.|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.
T Consensus 267 --------------~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~ 323 (368)
T 3jue_A 267 --------------AGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA 323 (368)
T ss_dssp --------------TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred --------------CCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 688888888888888888888888888888888888888888888888888888875
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.89 E-value=8.6e-23 Score=177.87 Aligned_cols=130 Identities=22% Similarity=0.257 Sum_probs=117.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCccccc------CCCCChHHHHHHh---cCCHHHHHHHHhccCCCccccccchhh
Q psy12892 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQ------NGEGQTALHIASA---EGDEALVKYFYGAKANASITDHQGIQR 89 (315)
Q Consensus 19 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~g~t~l~~A~~---~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 89 (315)
...+.||.|+..|+++.++.|++.|++++.. +..|.||||+||. .|+.+++++|+++|++++..+.
T Consensus 131 ~~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~----- 205 (497)
T 3lvq_E 131 PEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA----- 205 (497)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-----
T ss_pred ccHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-----
Confidence 3447899999999999999999999999877 8899999999976 8999999999999999998887
Q ss_pred HHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcccc
Q psy12892 90 DIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIF 169 (315)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~ 169 (315)
.|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++. |++++
T Consensus 206 -----------------~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~~ 267 (497)
T 3lvq_E 206 -----------------DGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA-QAGTF 267 (497)
T ss_dssp -----------------SSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHT-CC---
T ss_pred -----------------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh-CCCCC
Confidence 799999999999999999999999999999999999999999999999999999996 98887
Q ss_pred cc
Q psy12892 170 ER 171 (315)
Q Consensus 170 ~~ 171 (315)
..
T Consensus 268 ~~ 269 (497)
T 3lvq_E 268 AF 269 (497)
T ss_dssp --
T ss_pred CC
Confidence 63
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.1e-22 Score=163.63 Aligned_cols=121 Identities=23% Similarity=0.286 Sum_probs=76.6
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCccc------ccCCCCChHHHHHHhc---CCHHHHHHHHhccCCCccccccchhhHH
Q psy12892 21 DTALHLAARKRDLDMVRILVDYGTSVD------IQNGEGQTALHIASAE---GDEALVKYFYGAKANASITDHQGIQRDI 91 (315)
Q Consensus 21 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~l~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 91 (315)
.++|+.|+..|+++.++.+++.|++++ ..+..|.||||+|+.. |+.+++++|+++|++++..+.
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~------- 203 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTG------- 203 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCT-------
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCC-------
Confidence 346666666666666666666666633 2355566666666666 566666666666666665554
Q ss_pred HhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHh
Q psy12892 92 AAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADK 163 (315)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 163 (315)
.|.||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|++.
T Consensus 204 ---------------~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 204 ---------------KGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp ---------------TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------------CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 566666666666666666666666666666666666666666666666666666664
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=1.9e-23 Score=163.14 Aligned_cols=128 Identities=22% Similarity=0.235 Sum_probs=109.0
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHH
Q psy12892 48 IQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF 127 (315)
Q Consensus 48 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 127 (315)
..+..|.||||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~----------------------~g~t~L~~A~~~~~~~~v~~L 125 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDK----------------------AGSTALYWACHGGHKDIVEML 125 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCCCCccccCC----------------------CCCCHHHHHHHcCCHHHHHHH
Confidence 3456778999999999999999999999999887776 788999999999999999999
Q ss_pred HhC-CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC
Q psy12892 128 YGA-KANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198 (315)
Q Consensus 128 l~~-~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~ 198 (315)
++. |++++..+..|.||||+|+..|+.+++++|+++ |++++..+..|.|||++|+..+..++++.|++.+
T Consensus 126 l~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 126 FTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-GARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp TTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-TCCSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred HcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 988 999999999999999999999999999999997 9999988888888888888888878877777655
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.89 E-value=3.1e-23 Score=144.52 Aligned_cols=109 Identities=25% Similarity=0.414 Sum_probs=96.8
Q ss_pred ccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhh
Q psy12892 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAA 94 (315)
Q Consensus 15 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 94 (315)
.+|.+|.||||+||..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~---------- 73 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSK---------- 73 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCT----------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCC----------
Confidence 3678999999999999999999999999999999999999999999999999999999999999887776
Q ss_pred hhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCCcccCCCCCCcHH
Q psy12892 95 GTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPM 145 (315)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l 145 (315)
.|.|||++|+..++.+++++|++.|++++..+..+.+|-
T Consensus 74 ------------~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 74 ------------DGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp ------------TCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred ------------CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 688999999999999999999999999998888887763
No 108
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=7.5e-22 Score=164.11 Aligned_cols=140 Identities=21% Similarity=0.190 Sum_probs=118.3
Q ss_pred CCCChHHHHHHhc-CCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 51 GEGQTALHIASAE-GDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 51 ~~g~t~l~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
..+.|+||.|+.. ++.+++++|+++|++++..+... .|.||||+|+..|+.+++++|++
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~--------------------~g~TpLh~Aa~~g~~~iv~~LL~ 256 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQ--------------------DNATPLIQATAANSLLACEFLLQ 256 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTT--------------------TCCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcCCCCCcccccc--------------------CCCCHHHHHHHCCCHHHHHHHHH
Confidence 3456899999999 99999999999999999876211 78999999999999999999999
Q ss_pred CCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcC---------CC
Q psy12892 130 AKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKK---------GI 200 (315)
Q Consensus 130 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~---------~~ 200 (315)
.|++++..+..|.||||+|+..|+.+++++|++. |++++..+..|.|||++|+..++.+++++|+..+ +.
T Consensus 257 ~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~-Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~ 335 (368)
T 3jue_A 257 NGANVNQADSAGRGPLHHATILGHTGLACLFLKR-GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQA 335 (368)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC----------
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC-cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCC
Confidence 9999999999999999999999999999999996 9999999999999999999999999999999765 23
Q ss_pred CCCcHHHHHHH
Q psy12892 201 ENYNVLHLAAM 211 (315)
Q Consensus 201 ~~~~~l~~A~~ 211 (315)
.+.++++.+..
T Consensus 336 ~~~t~l~i~~~ 346 (368)
T 3jue_A 336 GDETYLDIFRD 346 (368)
T ss_dssp -----------
T ss_pred CCCCHHHHHHH
Confidence 34555555443
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=1.6e-21 Score=169.94 Aligned_cols=141 Identities=16% Similarity=0.110 Sum_probs=117.0
Q ss_pred ChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHh---cCCHHHHHHHHhC
Q psy12892 54 QTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASA---EGDEALVKYFYGA 130 (315)
Q Consensus 54 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~---~~~~~~v~~Ll~~ 130 (315)
.+.||.|+..|+.++++.|++.|++++...... ..+..|.||||+|+. .|+.+++++|++.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~----------------~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ 196 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGP----------------DAQAPEELVLHLAVKVANQASLPLVDFIIQN 196 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCS----------------SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCc----------------ccccccchHHHHHHHhcccccHHHHHHHHHc
Confidence 378999999999999999999999988661100 001179999999965 8999999999999
Q ss_pred CCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcHHHHHHHHhcCCCCCCcHHHHHH
Q psy12892 131 KANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAA 210 (315)
Q Consensus 131 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~l~~A~ 210 (315)
|++++..|..|.||||+|+..|+.+++++|+++ |++++..+..|.||||+|+..|+.+++++|++.|.....+|+|.+.
T Consensus 197 ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h~~~ 275 (497)
T 3lvq_E 197 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLHVDY 275 (497)
T ss_dssp SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHT-CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------
T ss_pred CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcceeec
Confidence 999999999999999999999999999999996 9999999999999999999999999999999999888889999876
Q ss_pred H
Q psy12892 211 M 211 (315)
Q Consensus 211 ~ 211 (315)
.
T Consensus 276 ~ 276 (497)
T 3lvq_E 276 S 276 (497)
T ss_dssp -
T ss_pred c
Confidence 4
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=3e-21 Score=128.93 Aligned_cols=92 Identities=38% Similarity=0.632 Sum_probs=67.6
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCC
Q psy12892 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAK 131 (315)
Q Consensus 52 ~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~ 131 (315)
+|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|++.|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~----------------------~g~t~L~~A~~~~~~~~v~~Ll~~g 58 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK----------------------NGRTPLHLAARNGHLEVVKLLLEAG 58 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCC----------------------CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 366777777777777777777777777776665 5777777777777777777777777
Q ss_pred CCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCc
Q psy12892 132 ANASITDHQDRTPMHLAAENGHASIIELLADKFRA 166 (315)
Q Consensus 132 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~ 166 (315)
++++..+..|.||||+|+..|+.+++++|++. |+
T Consensus 59 a~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~-ga 92 (93)
T 1n0q_A 59 ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-GA 92 (93)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-CC
Confidence 77777777777777777777777777777764 44
No 111
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=1e-20 Score=152.24 Aligned_cols=118 Identities=20% Similarity=0.232 Sum_probs=105.8
Q ss_pred ChHHHHHHhcCCHHHHHHHHhCCCCcc------cCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCccccccccCCccHH
Q psy12892 109 QTALHIASAEGDEALVKYFYGAKANAS------ITDHQDRTPMHLAAEN---GHASIIELLADKFRASIFERTKENYNVL 179 (315)
Q Consensus 109 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~------~~~~~~~~~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~l 179 (315)
.++|+.|+..++.+.+..+++.|.+++ ..+..|.||||+|+.. |+.+++++|+++ |++++..+..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHH
Confidence 368999999999999999999998843 4478899999999999 899999999997 999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhcC------CCCCCcHHHHHHHcCCHHHHHHHHhccCCc
Q psy12892 180 HLAAMYSREDVVKLLLNKK------GIENYNVLHLAAMYSREDVVKLLLNKKGIN 228 (315)
Q Consensus 180 ~~a~~~~~~~~~~~Ll~~~------~~~~~~~l~~A~~~~~~~~~~~Ll~~~~~~ 228 (315)
|+|+..|+.+++++|++.| +..|.||||+|+..++.+++++|++ .|++
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~ 263 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ-ALSG 263 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 9999999999999999887 6789999999999999999999998 5543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=3.8e-21 Score=133.89 Aligned_cols=109 Identities=29% Similarity=0.449 Sum_probs=100.2
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHH
Q psy12892 48 IQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF 127 (315)
Q Consensus 48 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 127 (315)
..|..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~----------------------~g~t~L~~A~~~~~~~~~~~L 61 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSK----------------------DGNTPLHLAAKNGHAEIVKLL 61 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCS----------------------SSCCTTHHHHTTTCHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC----------------------CCCCHHHHHHHcCcHHHHHHH
Confidence 3578999999999999999999999999999988776 789999999999999999999
Q ss_pred HhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHH
Q psy12892 128 YGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVL 179 (315)
Q Consensus 128 l~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l 179 (315)
++.|++++..+..|.|||++|+..|+.+++++|+++ |++++..+..+.+|-
T Consensus 62 l~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 62 LAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp TTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred HHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 999999999999999999999999999999999996 999999998888763
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=2.9e-20 Score=128.17 Aligned_cols=97 Identities=30% Similarity=0.381 Sum_probs=85.1
Q ss_pred chhhccccccCCCcHHHHHHHcCCHHHHHHHHHcCCcccccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchh
Q psy12892 9 TAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQ 88 (315)
Q Consensus 9 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~ 88 (315)
.+......|.+|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~---- 88 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDK---- 88 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT----
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc----
Confidence 3445778899999999999999999999999999999999999999999999999999999999999999988876
Q ss_pred hHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHH
Q psy12892 89 RDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF 127 (315)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 127 (315)
.|.||||+|+..++.+++++|
T Consensus 89 ------------------~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 89 ------------------FGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp ------------------TSCCHHHHHHHHTCHHHHHHH
T ss_pred ------------------CCCcHHHHHHHcCCHHHHHHh
Confidence 799999999999999999986
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=2e-18 Score=118.82 Aligned_cols=91 Identities=24% Similarity=0.397 Sum_probs=62.2
Q ss_pred ccCCCCChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHH
Q psy12892 48 IQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF 127 (315)
Q Consensus 48 ~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L 127 (315)
..+.+|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..|+.+++++|
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~----------------------~g~tpLh~A~~~~~~~~v~~L 76 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK----------------------NGSTPLHLAARNGHLEVVKLL 76 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT----------------------TCCCHHHHHHHTTCHHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC----------------------CCCCHHHHHHHcCCHHHHHHH
Confidence 3456666777777777777777777777776666554 566777777777777777777
Q ss_pred HhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy12892 128 YGAKANASITDHQDRTPMHLAAENGHASIIELL 160 (315)
Q Consensus 128 l~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 160 (315)
++.|++++..+..|.||||+|+..|+.+++++|
T Consensus 77 l~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 77 LEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 777777777777777777777777777776655
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=74.32 E-value=12 Score=32.18 Aligned_cols=144 Identities=12% Similarity=0.047 Sum_probs=78.6
Q ss_pred HHHHHHHcCCHHH----HHHHHHcCCcccccCCCCChHHHHHHhcCC--------------HHHHHHHHhccCCCccccc
Q psy12892 23 ALHLAARKRDLDM----VRILVDYGTSVDIQNGEGQTALHIASAEGD--------------EALVKYFYGAKANASITDH 84 (315)
Q Consensus 23 ~L~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~--------------~~~v~~Ll~~~~~~~~~~~ 84 (315)
.|..+++.|+++- ++.+.+.|..++... ++.|..|+.... .++++.+.+.|..++....
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEARRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 4666778888644 444456687665432 345555554321 3456666667766554322
Q ss_pred cchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHH----HHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHH
Q psy12892 85 QGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVK----YFYGAKANASITDHQDRTPMHLAAENGHASIIELL 160 (315)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~----~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L 160 (315)
.+.+...+..|..+-+. .+.+.|..++... -.+.+...++.|..+-...+
T Consensus 109 ------------------------n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~t--yn~lI~~~~~~g~~~~A~~l 162 (501)
T 4g26_A 109 ------------------------TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRS--YGPALFGFCRKGDADKAYEV 162 (501)
T ss_dssp ------------------------HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHH--HHHHHHHHHHTTCHHHHHHH
T ss_pred ------------------------HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccce--ehHHHHHHHHCCCHHHHHHH
Confidence 13445566677765444 4445666554322 12455566778887755555
Q ss_pred HHh---cCccccccccCCccHHHHHHHcCcHHHHHHHHhc
Q psy12892 161 ADK---FRASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 161 l~~---~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
++. .|..++.... .+.+...++.|+.+-+..+++.
T Consensus 163 ~~~M~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 163 DAHMVESEVVPEEPEL--AALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHHHHH
Confidence 443 2554443322 2345566778887766666543
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=63.77 E-value=39 Score=24.40 Aligned_cols=138 Identities=9% Similarity=0.060 Sum_probs=87.4
Q ss_pred ChHHHHHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHhCCCC
Q psy12892 54 QTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKAN 133 (315)
Q Consensus 54 ~t~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~ 133 (315)
.+=|..|+..|+.+..-.+.+...+ .. .+..-=..|...|+.++++.....-.+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~~---~~-----------------------~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLND---SI-----------------------TWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHCC---HH-----------------------HHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhCC---HH-----------------------HHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 4667889999998888776543211 00 112233567788999999988876544
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCccccccccCCccHHHHHHHcCcH-HHHHHHHhcCCCCCCcHHHHHHHc
Q psy12892 134 ASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSRE-DVVKLLLNKKGIENYNVLHLAAMY 212 (315)
Q Consensus 134 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~l~~A~~~ 212 (315)
+. ..+......|+.+-++.+.+. -....+....++.+...|+. ++++.|.+.+ ...-+...|..+
T Consensus 63 ~~-------~L~~Ly~~tg~~e~L~kla~i-----A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~--r~~eA~~~A~t~ 128 (177)
T 3mkq_B 63 FD-------KLSFLYLVTGDVNKLSKMQNI-----AQTREDFGSMLLNTFYNNSTKERSSIFAEGG--SLPLAYAVAKAN 128 (177)
T ss_dssp HH-------HHHHHHHHHTCHHHHHHHHHH-----HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT--CHHHHHHHHHHT
T ss_pred HH-------HHHHHHHHhCCHHHHHHHHHH-----HHHCccHHHHHHHHHHcCCHHHHHHHHHHCC--ChHHHHHHHHHc
Confidence 32 345555667787777766553 11122234567777777765 5666666543 123455677789
Q ss_pred CCHHHHHHHHhccCCcccc
Q psy12892 213 SREDVVKLLLNKKGINVAA 231 (315)
Q Consensus 213 ~~~~~~~~Ll~~~~~~~~~ 231 (315)
|..++.+.+++..|.+...
T Consensus 129 g~~~~a~~~~~~~~~~~~~ 147 (177)
T 3mkq_B 129 GDEAAASAFLEQAEVDEQD 147 (177)
T ss_dssp TCHHHHHHHHHHTTCCGGG
T ss_pred CcHHHHHHHHHHhCCcccc
Confidence 9999999999877766543
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=61.01 E-value=6.9 Score=19.82 Aligned_cols=17 Identities=35% Similarity=0.417 Sum_probs=11.4
Q ss_pred HHHHHHcCCHHHHHHHH
Q psy12892 24 LHLAARKRDLDMVRILV 40 (315)
Q Consensus 24 L~~A~~~~~~~~v~~Ll 40 (315)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777777777663
No 118
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=42.19 E-value=70 Score=27.46 Aligned_cols=98 Identities=11% Similarity=-0.018 Sum_probs=53.8
Q ss_pred HHHHHHHhCCCCcccCCCCCCcHHHHHHHcCCHHHHHHHHHhc---CccccccccCCccHHHHHHHcCcHHHHHHHHh--
Q psy12892 122 ALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKF---RASIFERTKENYNVLHLAAMYSREDVVKLLLN-- 196 (315)
Q Consensus 122 ~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~-- 196 (315)
++++.+.+.|..++... -.+.+...++.|..+-...+++.+ |..++.... .+.+...++.|+.+-+..+++
T Consensus 91 ~lf~~M~~~G~~Pd~~t--yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEAT--FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHH
Confidence 46666677777665332 124566677889987666555432 444443322 234556678888766655554
Q ss_pred --cCCCC---CC-cHHHHHHHcCCHHHHHHHHh
Q psy12892 197 --KKGIE---NY-NVLHLAAMYSREDVVKLLLN 223 (315)
Q Consensus 197 --~~~~~---~~-~~l~~A~~~~~~~~~~~Ll~ 223 (315)
.|-.. -. +.+...++.|+.+-+..+++
T Consensus 167 ~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~ 199 (501)
T 4g26_A 167 VESEVVPEEPELAALLKVSMDTKNADKVYKTLQ 199 (501)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHH
Confidence 33111 11 23445566777765555544
No 119
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=26.75 E-value=93 Score=25.16 Aligned_cols=60 Identities=7% Similarity=0.020 Sum_probs=30.2
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhc--CccccccccCCccHHHHHHHcCcHHHHHHHHhc
Q psy12892 138 DHQDRTPMHLAAENGHASIIELLADKF--RASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197 (315)
Q Consensus 138 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~--~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~ 197 (315)
+..|...+..+......+-...+++.. ....-..|.+|+-.+......+.++..+.+++.
T Consensus 178 ~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~~~~~~~~~~i~~~ 239 (351)
T 3gvo_A 178 HPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSE 239 (351)
T ss_dssp STTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHT
T ss_pred CcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHHhCchhhHHHHHHH
Confidence 334445555555544443333333211 112223456666667777777766666666654
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.72 E-value=2.1e+02 Score=23.92 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=39.1
Q ss_pred HHHcCCHHHHHHHHHcCCcccc--------------cCCCCChHHHHHHhcCCHHHHHHHHhc
Q psy12892 27 AARKRDLDMVRILVDYGTSVDI--------------QNGEGQTALHIASAEGDEALVKYFYGA 75 (315)
Q Consensus 27 A~~~~~~~~v~~Ll~~g~~~~~--------------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 75 (315)
.+..|+...|+-.+..|.|++. .-.-|.|.+|.|+...+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3458999999999988866431 124589999999999999999999863
No 121
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=24.35 E-value=1.4e+02 Score=24.81 Aligned_cols=63 Identities=14% Similarity=0.176 Sum_probs=41.5
Q ss_pred HHHhcCCHHHHHHHHhccCCCccccccchhhHHHhhhhhhHHhhhhccCCChHHHHHHhcCCHHHHHHHHh
Q psy12892 59 IASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129 (315)
Q Consensus 59 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~ 129 (315)
..+..|+..-|+..+..|.+++..-...-...+.... .-..|.|-+|+|++..+.+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~--------af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPS--------AFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTT--------TCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCc--------ccccCchhhhhhhhhhhhhHHHHhhh
Confidence 3456788999998888888766433211111111100 01268999999999999999999886
No 122
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=22.88 E-value=3e+02 Score=22.11 Aligned_cols=54 Identities=13% Similarity=0.156 Sum_probs=29.7
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCccc--cccccCCccHHHHHHHcCcHHH
Q psy12892 137 TDHQDRTPMHLAAENGHASIIELLADKFRASI--FERTKENYNVLHLAAMYSREDV 190 (315)
Q Consensus 137 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~~~~~~~~l~~a~~~~~~~~ 190 (315)
.|..|+-.+..+...+..+..+.+++.....+ -..+..|...+..+...+..+.
T Consensus 213 ~d~~Gn~ViQ~~l~~~~~~~~~~i~~~l~~~~~~Ls~~k~gs~Vvek~l~~~~~~~ 268 (351)
T 3gvo_A 213 QDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAE 268 (351)
T ss_dssp TSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHTSTTHHHHHHHHHHHSCHHH
T ss_pred CCchHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhCCHHH
Confidence 46667777777777777776666666432211 1223444455555555554443
Done!