RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12892
(315 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 108 bits (271), Expect = 1e-27
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 30/223 (13%)
Query: 22 TALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASI 81
T LH+A+ L +V+ L+ G S ++ N + +T LH+A+ G + KY KA +
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61
Query: 82 TDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQD 141
+ QT LH A+ G +VK AN ++
Sbjct: 62 KAK----------------------DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG 99
Query: 142 RTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL------ 195
TP+H A L + AS TK+ + LH+AA Y + V +LLL
Sbjct: 100 HTPLH-IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP 158
Query: 196 NKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLT 238
N G LH+A ++ D+VK LL +G + + T
Sbjct: 159 NAAGKNGLTPLHVAVHHNNLDIVK-LLLPRGGSPHSPAWNGYT 200
Score = 107 bits (267), Expect = 5e-27
Identities = 52/222 (23%), Positives = 92/222 (41%), Gaps = 18/222 (8%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYG 74
+ + +T LH+AAR ++ + L+ V+ + + QT LH A+ G +VK
Sbjct: 28 VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLE 87
Query: 75 AKANASITDHQGIQRDIAAAGTSVLANCLLMGE-----------GQTALHIASAEGDEAL 123
AN ++ G AA + L + E G T LH+A+ G +
Sbjct: 88 NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRV 147
Query: 124 VKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAA 183
+ A+ + TP+H+A + + I++LL + S Y LH+AA
Sbjct: 148 AELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAA 206
Query: 184 MYSREDVVKLLLN------KKGIENYNVLHLAAMYSREDVVK 219
++ +V + LL + ++ LHLAA ++V
Sbjct: 207 KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVA 248
Score = 95.0 bits (235), Expect = 1e-22
Identities = 59/238 (24%), Positives = 95/238 (39%), Gaps = 19/238 (7%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIA 60
+ ELL + A A NG T LH+A +LD+V++L+ G S G T LHIA
Sbjct: 147 VAELLLERDAH-PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 205
Query: 61 SAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMG-----------EGQ 109
+ + + + +A+ QG+ AA L+ G
Sbjct: 206 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL 265
Query: 110 TALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIF 169
T LH+ + EG + T TP+H+A+ G+ +++ + +A +
Sbjct: 266 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVK-FLLQHQADVN 324
Query: 170 ERTKENYNVLHLAAMYSREDVVKLLL------NKKGIENYNVLHLAAMYSREDVVKLL 221
+TK Y+ LH AA D+V LLL N+ + L +A V +L
Sbjct: 325 AKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 91.6 bits (226), Expect = 2e-21
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 23/183 (12%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYF-- 72
A ++ G T LHLAA++ +MV +L+ + ++ N G T LH+ + EG +
Sbjct: 226 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 285
Query: 73 YGAKANASITDHQ---------GIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEAL 123
+G +A+ G + + G + LH A+ +G +
Sbjct: 286 HGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI 345
Query: 124 VKYFYGAKANASITDHQDRTPMHLAAENGHASIIELL------------ADKFRASIFER 171
V A+ + TP+ +A G+ S+ ++L +DK R S E
Sbjct: 346 VTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPET 405
Query: 172 TKE 174
E
Sbjct: 406 VDE 408
Score = 32.3 bits (72), Expect = 0.072
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 13 LKATTINGDTALHLAARKRDLDMVRIL---VDYGTSVDIQNGEGQTA 56
+ +G T L +A R + + +L D + V + + +
Sbjct: 356 PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSF 402
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 103 bits (258), Expect = 1e-26
Identities = 58/253 (22%), Positives = 95/253 (37%), Gaps = 32/253 (12%)
Query: 18 INGDTALHLAARKRDLDMVRILVDYGTSVDIQNGE-GQTALHIASAEGDEALVKYFYGAK 76
+ + L A + D+D+V+ L++ G +V+ Q E G T LH A E +V+
Sbjct: 3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62
Query: 77 ANASITDHQGIQRDIAAAGTSVLANCLLMGE-----------GQTALHIASAEGDEALVK 125
A+ + G + AA + L G TA A+ G +K
Sbjct: 63 ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122
Query: 126 YFYGAKANASITDHQD----------RTPMHLAAENGHASIIELLADKFRASIFERTKEN 175
+ Y AN ++ T + AAE GH ++++L D+ A +
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182
Query: 176 YNVLHLAAMYSR----EDVVKLLL------NKKGIENYNVLHLAAMYSREDVVKLLLNKK 225
N L A + S E + LLL N +G L LA +V+ LL ++
Sbjct: 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242
Query: 226 GINVAALGGEDLT 238
I + + T
Sbjct: 243 HIEINDTDSDGKT 255
Score = 77.7 bits (190), Expect = 5e-17
Identities = 45/238 (18%), Positives = 81/238 (34%), Gaps = 59/238 (24%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKAN 78
G T LH A + D+V +L+ +G ++ G T +A+ G L+K F A+
Sbjct: 38 GGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD 97
Query: 79 ASITDHQGIQRDIAAAGTSVLANCLLMGE---------------------GQTALHIASA 117
+ D G + AA + + + G TAL A+
Sbjct: 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
Query: 118 EGDEALVKYF---YGAKANA-----------------------------------SITDH 139
+G ++K GA NA ++
Sbjct: 158 KGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE 217
Query: 140 QDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197
+ +TP+ LA E H +++ L ++ I + + L LA + + +LL +
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275
Score = 70.0 bits (170), Expect = 2e-14
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 20/155 (12%)
Query: 11 EQLKATTINGDTALHLAARKRDLDMVRILVD-YGTSVDIQNGEGQTALHIASAEGDEALV 69
E + G TAL AA K +++++IL+D G V+ + G+
Sbjct: 139 EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR--------------- 183
Query: 70 KYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYG 129
A ++ +D + I + G V G+T L +A + LV+
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVRG---ERGKTPLILAVEKKHLGLVQRLLE 240
Query: 130 AK-ANASITDHQDRTPMHLAAENGHASIIELLADK 163
+ + TD +T + LA E I ELL +
Sbjct: 241 QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 275
Score = 58.8 bits (141), Expect = 1e-10
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVD-YGTSVDIQNGEGQTALHIASAEGDEALVKYFY 73
G T L LA K+ L +V+ L++ ++ + +G+TAL +A + + +
Sbjct: 214 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLC 273
Query: 74 GAKANASITD 83
A+ D
Sbjct: 274 KRGASTDCGD 283
Score = 45.3 bits (106), Expect = 4e-06
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQN 50
+ + L Q ++ T +G TAL LA + + +L G S D +
Sbjct: 234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 85.5 bits (210), Expect = 4e-20
Identities = 49/240 (20%), Positives = 82/240 (34%), Gaps = 34/240 (14%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYG---TSVDIQNGEGQTALHIASAEGDEALVKYFYGA 75
+GDTALHLA + + L+ + +D+QN GQTALH+A+ G+ + V+ Y A
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67
Query: 76 KANASITDHQGIQ-------------------------RDIAAAGTSVLANCLLMGEGQT 110
A + + G RD + + +C
Sbjct: 68 GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127
Query: 111 ALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFE 170
A + + + ++ TP+H+A + A ++ LL D
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187
Query: 171 RTKENYNVLHLAAMYSREDVVKLLL------NKKGIENYNVLHLAAMYSREDVVKLLLNK 224
LHLA V++LLL + L A + + +LL
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAH 247
Score = 60.9 bits (146), Expect = 2e-11
Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 4/137 (2%)
Query: 107 EGQTALHIASAEGDEALVKYFYGAKANASITDHQD---RTPMHLAAENGHASIIELLADK 163
+G TALH+A E + + G A D Q+ +T +HLAA G AS +E
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK-LYA 66
Query: 164 FRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLN 223
A + + + LHLA +LL + + S++
Sbjct: 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHA 126
Query: 224 KKGINVAALGGEDLTGR 240
++ + R
Sbjct: 127 PAAVDSQPNPENEEEPR 143
Score = 50.1 bits (118), Expect = 9e-08
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 22 TALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYF--YGAK 76
T LHLA + ++ +L+ G + G+T L A + L + +GA
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250
Score = 38.1 bits (87), Expect = 7e-04
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYG 43
+ ELL A+ A G T L A + + + R+L +G
Sbjct: 207 VLELLLKAGAD-PTARMYGGRTPLGSALLRPNPILARLLRAHG 248
Score = 36.6 bits (83), Expect = 0.002
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 9/53 (16%)
Query: 172 TKENYNVLHLAAMYSREDVVKLLL---------NKKGIENYNVLHLAAMYSRE 215
T++ LHLA ++ E + LL + + LHLAA+
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA 58
Score = 30.8 bits (68), Expect = 0.16
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 194 LLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGR 240
+ + LHLA ++ E + LL L ++ G+
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLL-GFSAGHEYLDLQNDLGQ 46
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 86.9 bits (214), Expect = 4e-20
Identities = 29/262 (11%), Positives = 62/262 (23%), Gaps = 45/262 (17%)
Query: 13 LKATTINGDTALHLAARK---RDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALV 69
I + +AA LD + +L+ V + E A +A+ G ++
Sbjct: 83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 142
Query: 70 KYF--YGAKANASITDHQG--------------IQRDIAAAGTSVLANCLLMGEGQTALH 113
++ + + + + +
Sbjct: 143 NRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 202
Query: 114 IASAEGDEALVKYFYGAKA-------NASITDHQDRTPMHLAAENGHASIIELL------ 160
A G ++ + + + P N + +
Sbjct: 203 AAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPD 262
Query: 161 --ADKFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIEN-----------YNVLH 207
D S + L D ++ LL+ GI+ +L
Sbjct: 263 GVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLR 322
Query: 208 LAAMYSREDVVKLLLNKKGINV 229
LA + LLL+ +
Sbjct: 323 LALRLGNQGACALLLSIPSVLA 344
Score = 86.9 bits (214), Expect = 6e-20
Identities = 27/207 (13%), Positives = 55/207 (26%), Gaps = 13/207 (6%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVD---IQNGEGQTAL 57
+ L E + A LAA L ++ L + + IQ
Sbjct: 142 LNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFR 201
Query: 58 HIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASA 117
A G ++ + + + + + + + E A +++
Sbjct: 202 WAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNP 261
Query: 118 EGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELL----ADKFRASIFERTK 173
+G LV + + + + I L K A
Sbjct: 262 DGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPG 315
Query: 174 ENYNVLHLAAMYSREDVVKLLLNKKGI 200
+ +L LA + LLL+ +
Sbjct: 316 DANELLRLALRLGNQGACALLLSIPSV 342
Score = 71.1 bits (173), Expect = 1e-14
Identities = 28/232 (12%), Positives = 61/232 (26%), Gaps = 35/232 (15%)
Query: 12 QLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDI-----------QNGEGQTALHIA 60
L + + L K + ++L Y + + + + +A
Sbjct: 38 SLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVA 97
Query: 61 SAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGD 120
+ G + + + I E A +A+ G
Sbjct: 98 AITGCSSALDTLCLLLTSDEIVKVIQ-------------------AENYQAFRLAAENGH 138
Query: 121 EALVKYF--YGAKANASITDHQDRTPMHLAAENGHASIIELLADKFR--ASIFERTKENY 176
++ ++ ++ LAAENGH ++ L + A+ + + Y
Sbjct: 139 LHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYY 198
Query: 177 NVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNKKGIN 228
A +V+ LL + Y + V +
Sbjct: 199 AFRWAAVGRGHHNVINFLL-DCPVMLAYAEIHEFEYGEKYVNPFIARHVNRL 249
Score = 61.8 bits (149), Expect = 2e-11
Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 24/189 (12%)
Query: 48 IQNGEGQTALHIASAEGDEALVKYFYGAKAN--ASITDHQGIQRDIAAAGTSVLANCLLM 105
I+N E L + E L ++F A +++ + I + LL
Sbjct: 7 IENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLC 66
Query: 106 GEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLAD--K 163
A + + ++A + +AA G +S ++ L
Sbjct: 67 LYY--------AHYNRNAKQL----WSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLT 114
Query: 164 FRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIEN--------YNVLHLAAMYSRE 215
+ ENY LAA V+ L E Y+ LAA
Sbjct: 115 SDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL 174
Query: 216 DVVKLLLNK 224
V+ L
Sbjct: 175 HVLNRLCEL 183
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 82.2 bits (201), Expect = 4e-19
Identities = 47/226 (20%), Positives = 82/226 (36%), Gaps = 25/226 (11%)
Query: 19 NGDTALHLAARKRDLDMVRILVDY----GTSVDIQNGEGQTALHIASAEGDEALVKYFYG 74
+GDT LH+A + +L V LV+ G +DI N QT LH+A ++V+
Sbjct: 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT 61
Query: 75 AKANASITDHQGIQRDIAAAGTSVLANCLL---------------MGEGQTALHIASAEG 119
A A+ D G A +G TALH+A
Sbjct: 62 AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121
Query: 120 DEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVL 179
+ V+ A+ D + + A ++ + L + A++ + + L
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181
Query: 180 HLAAMYSREDVVKLLL------NKKGIENYNVLHLAAMYSREDVVK 219
H A+ +V+ L+ + K N L +A D+++
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 33.7 bits (75), Expect = 0.018
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 15 ATTINGDTALHLAARKRDLDMVR 37
+ DT L +A +R +D++R
Sbjct: 205 LKNCHNDTPLMVARSRRVIDILR 227
Score = 29.8 bits (65), Expect = 0.37
Identities = 8/38 (21%), Positives = 13/38 (34%)
Query: 206 LHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDL 243
LH+A + V L+N L + + L
Sbjct: 7 LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPL 44
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 81.6 bits (200), Expect = 8e-19
Identities = 48/220 (21%), Positives = 85/220 (38%), Gaps = 20/220 (9%)
Query: 21 DTALHLAARKRDLDMVR-ILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANA 79
+ + A L+ ++ ++ + + + +TALH A + G +V++
Sbjct: 4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63
Query: 80 SITDHQGIQR--DIAAAGTSVLANCLLMG---------EGQTALHIASAEGDEALVKYFY 128
+ D G A+AG + LL G T LH A+++ +
Sbjct: 64 NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL 123
Query: 129 GAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSRE 188
AN DH + T MH AA G+ +I +L ++AS + E LHLA R
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHIL-LYYKASTNIQDTEGNTPLHLACDEERV 182
Query: 189 DVVKLLL------NKKGIENYNVLHLAAMYSREDVVKLLL 222
+ KLL+ + E L +A ++K ++
Sbjct: 183 EEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 71.5 bits (174), Expect = 2e-15
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIA 60
I + L + A Q+ A NG T LH AA K ++ +L++ G + D ++ TA+H A
Sbjct: 85 IVKALLGKGA-QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRA 143
Query: 61 SAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGD 120
+A+G+ ++ KA+ +I D EG T LH+A E
Sbjct: 144 AAKGNLKMIHILLYYKASTNIQDT----------------------EGNTPLHLACDEER 181
Query: 121 EALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELL 160
K A+ I + +++TP+ +A G I++ +
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRM 220
Score = 67.7 bits (164), Expect = 7e-14
Identities = 46/228 (20%), Positives = 78/228 (34%), Gaps = 58/228 (25%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARK------------------------------ 30
+ E + + T + TALH A
Sbjct: 19 LKESILADKSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIA 77
Query: 31 ---RDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGI 87
++V+ L+ G V+ N G T LH A+++ + AN DH
Sbjct: 78 ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDH--- 134
Query: 88 QRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHL 147
TA+H A+A+G+ ++ KA+ +I D + TP+HL
Sbjct: 135 -------------------YEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHL 175
Query: 148 AAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL 195
A + +LL + ASI+ KE L +A ++K ++
Sbjct: 176 ACDEERVEEAKLLVSQ-GASIYIENKEEKTPLQVAK-GGLGLILKRMV 221
Score = 51.9 bits (123), Expect = 2e-08
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 7/133 (5%)
Query: 112 LHIASAEGD-EALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFE 170
+ + G E L + K+ A+ TD RT +H A GH I+E L +
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66
Query: 171 RTKENYNVLHLAAMYSREDVVKLL-----LNKKGIENYNVLHLAAMYSREDVVKLLLNKK 225
+ A+ E V LL +N LH AA +R ++ +LL +
Sbjct: 67 DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLL-EG 125
Query: 226 GINVAALGGEDLT 238
G N A + T
Sbjct: 126 GANPDAKDHYEAT 138
Score = 27.6 bits (60), Expect = 1.8
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVD 41
+LL +Q A + T L +A +++ +V+
Sbjct: 184 EAKLLVSQGAS-IYIENKEEKTPLQVAKGGLG-LILKRMVE 222
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 78.6 bits (192), Expect = 2e-17
Identities = 46/261 (17%), Positives = 88/261 (33%), Gaps = 41/261 (15%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDY--------GTSVDIQNGE 52
I E ++ ++ + + T LH A + L+ + G V+ + +
Sbjct: 16 ITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD 73
Query: 53 GQTALHIASAEGDEALVKYFYGAKANASIT--------------DHQGIQRDIAAAGTSV 98
T L +A LV Y A A+ +I G+ + +
Sbjct: 74 ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK 133
Query: 99 LANCLLMGEGQTALHIASAEG-----------DEALVKYFYGAKANASITDHQDRTPMHL 147
L G TAL I + E K Y A ++ RT +H
Sbjct: 134 GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY 193
Query: 148 AAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL------NKKGIE 201
AA+ + I++ L + ++ ++ ++ + LAA R +VV L+
Sbjct: 194 AAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDAT 253
Query: 202 NYNVLHLAAMYSREDVVKLLL 222
++ LA + ++V +
Sbjct: 254 DHTARQLAQANNHHNIVDIFD 274
Score = 43.2 bits (100), Expect = 2e-05
Identities = 44/258 (17%), Positives = 81/258 (31%), Gaps = 42/258 (16%)
Query: 21 DTALHLAARKRD-LDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKY-------- 71
++ + L + + ++ I +T LH ++ +
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 72 FYGAKANASITDHQG-----------IQRDIAAAGTSVLANCLLMGEGQTALHIASAEGD 120
A A+ + D +R +A + + ++ALH A+A D
Sbjct: 60 CIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRD 119
Query: 121 EALVKYFYGA---KANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYN 177
++ Y + K + D T + + A N +
Sbjct: 120 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 179
Query: 178 V----------LHLAAMYSREDVVKLLLNKKGIENYNV-------LHLAAMYSREDVVKL 220
LH AA S +VK L+ +KG + LAA R +VV
Sbjct: 180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 239
Query: 221 LLNKKGINVAALGGEDLT 238
L+ ++G +V A+ D T
Sbjct: 240 LI-QQGASVEAVDATDHT 256
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 77.2 bits (188), Expect = 3e-17
Identities = 41/228 (17%), Positives = 80/228 (35%), Gaps = 27/228 (11%)
Query: 21 DTALHLAARKRDLDMVRILVD-YGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANA 79
+ LH A + + V+ L+ + + ++ +G+ LH + + + + N
Sbjct: 1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60
Query: 80 SITD----------------HQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEAL 123
++ D + +G T LH+A + +
Sbjct: 61 NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 120
Query: 124 VKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAA 183
++ A+ I D ++ P+H AA G +IELL ++++ + K+ + L A
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 180
Query: 184 MYSREDVVKLLLNKKGI-------ENYNVLHLAAMYSREDVVKLLLNK 224
D LL+ K G + +A E V K LN
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNN 225
Score = 59.8 bits (143), Expect = 3e-11
Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 21/212 (9%)
Query: 3 ELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASA 62
ELL ++ + L +G LH + + ++ L+ +V++ + +
Sbjct: 18 ELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHI 76
Query: 63 EGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLL----------------MG 106
++ D I +
Sbjct: 77 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDK 136
Query: 107 EGQTALHIASAEGDEALVKYFYGA-KANASITDHQDRTPMHLAAENGHASIIELLADKFR 165
Q LH A++ G L++ G K+ + D Q TP+ A GH LL +K+
Sbjct: 137 FNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYG 196
Query: 166 ASIFERTKENYNVLHLAAMYSREDVVKLLLNK 197
A + +A E V K LN
Sbjct: 197 AEYDLVDNKGAKAEDVAL---NEQVKKFFLNN 225
Score = 49.8 bits (117), Expect = 1e-07
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 19 NGDTALHLAARKRDLDMVRILVD-YGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKA 77
G T L A + D +LV+ YG D+ + +G A +A +E + K+F
Sbjct: 171 QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227
Query: 78 NA 79
+A
Sbjct: 228 DA 229
Score = 33.6 bits (75), Expect = 0.019
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 206 LHLAAMYSREDVVKLLLNKKGINVAALGGEDLT 238
LH A M + V+ LL+ K + +
Sbjct: 4 LHQACMENEFFKVQELLHSKPSLLLQKDQDGRI 36
Score = 32.1 bits (71), Expect = 0.062
Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 4/43 (9%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYG 43
L+ AE G A +A + + + ++
Sbjct: 188 AVLLVEKYGAE-YDLVDNKGAKAEDVALNE---QVKKFFLNNV 226
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 75.5 bits (184), Expect = 3e-16
Identities = 40/256 (15%), Positives = 79/256 (30%), Gaps = 50/256 (19%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKAN 78
+ A D + V L++ G ++ N +G TALH A + + +VK+ AN
Sbjct: 39 DDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN 98
Query: 79 ---------------------------------ASITDHQGIQRDIAAAGTSVLANCLLM 105
+ +G A ++
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 106 GEGQTA-----LHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELL 160
Q ++ N T +H+AA G+ +++LL
Sbjct: 159 VNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218
Query: 161 ADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL------NKKGIENYNVLHLAAMYSR 214
+ R + + + + LH AA + +E+ ++L+ +A
Sbjct: 219 -IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD---- 273
Query: 215 EDVVKLLLN-KKGINV 229
ED++ L +K N+
Sbjct: 274 EDILGYLEELQKKQNL 289
Score = 54.7 bits (130), Expect = 3e-09
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYG 74
+G TALH+AA K +++++L+ V+I++ +G T LH A+ G E +
Sbjct: 194 RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE 253
Query: 75 AKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVK 125
+ + GQTA +A + L +
Sbjct: 254 NLCDMEAVNK----------------------VGQTAFDVADEDILGYLEE 282
Score = 36.2 bits (82), Expect = 0.003
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 131 KANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDV 190
K + D A +G + L ++ A I + LH A + D+
Sbjct: 30 KRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDM 88
Query: 191 VKL 193
VK
Sbjct: 89 VKF 91
Score = 27.0 bits (58), Expect = 2.9
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 4/38 (10%)
Query: 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQN 50
++A G TA +A D++ L + ++ +
Sbjct: 258 MEAVNKVGQTAFDVADE----DILGYLEELQKKQNLLH 291
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 74.7 bits (182), Expect = 5e-16
Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 32/196 (16%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIAS----------------- 61
+G+T LH +L++V+ LV +G++ + G++ L A
Sbjct: 106 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 165
Query: 62 -----AEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLA------NCLLMGEGQT 110
D + + +T + + E ++
Sbjct: 166 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 225
Query: 111 ALHIASAEGDEALVKYF---YGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRAS 167
+ + E +++++ + + D T +++AA G+ SI++ L D A
Sbjct: 226 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDY-GAD 284
Query: 168 IFERTKENYNVLHLAA 183
F K + A
Sbjct: 285 PFIANKSGLRPVDFGA 300
Score = 67.8 bits (164), Expect = 1e-13
Identities = 33/237 (13%), Positives = 76/237 (32%), Gaps = 17/237 (7%)
Query: 3 ELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQ-NGEGQTALHIAS 61
L+ ++ + + H++ ++ + +++I + G T LH +
Sbjct: 56 TSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT 115
Query: 62 AEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDE 121
+ + LVK+ +N D+ G + A + + L+ D
Sbjct: 116 SIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS 175
Query: 122 ALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHL 181
+ + +T AA+ ++ + K I T E + +
Sbjct: 176 MNRTILHHIIITSGMTGCSA------AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 229
Query: 182 AAMYSREDVVKLL---------LNKKGIENYNVLHLAAMYSREDVVKLLLNKKGINV 229
++ +++ L LN + L++AA +V LL G +
Sbjct: 230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALL-DYGADP 285
Score = 57.8 bits (138), Expect = 4e-10
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 13 LKATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIA 60
L A NGDT L++AAR ++ +V L+DYG I N G +
Sbjct: 252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 71.8 bits (174), Expect = 2e-15
Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 24/210 (11%)
Query: 19 NGDTALHLAARKRDLDMVRILVDY----GTSVDIQNGEGQTALHIASAEGDEALVKYFYG 74
+GD+ LHLA + + ++ ++ QN QT LH+A + + G
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60
Query: 75 AKANASITDHQGIQRDIAAAGTSVLANCLLMGE-----------------GQTALHIASA 117
A + + D +G A LA+ ++ + G T LH+AS
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 118 EGDEALVKYFYGAKANASITDHQD-RTPMHLAAENGHASIIELLADKFRASIFERTKENY 176
G +V+ A+ + + + RT +HLA + + ++ LL A + T + Y
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGY 179
Query: 177 NVLHLAAMYSREDVVKLLLNKKGIENYNVL 206
+ L + + L + +EN +L
Sbjct: 180 SPYQLTWGRPSTRIQQQLG-QLTLENLQML 208
Score = 53.0 bits (125), Expect = 7e-09
Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 105 MGEGQTALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELL---- 160
G+TALH+A + LV A+ + +Q +P L I + L
Sbjct: 142 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 201
Query: 161 ADKFRASIFERTKENYNV 178
+ + +E+Y+
Sbjct: 202 LENLQMLPESEDEESYDT 219
Score = 49.5 bits (116), Expect = 1e-07
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYF--YGAK 76
NG TALHLA ++ D+V +L+ G V+ +G + + + + +
Sbjct: 144 NGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Query: 77 ANASITD 83
+ +
Sbjct: 204 NLQMLPE 210
Score = 49.1 bits (115), Expect = 2e-07
Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 27/208 (12%)
Query: 52 EGQTALHIASAEGDEA----LVKYFYGAKANASITDHQG---------IQRDIAAAGTSV 98
+G + LH+A ++A +++ G A + ++ + A
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60
Query: 99 LANCLLMGEGQTALHIASAEGDEALVKYFYGAKANASITDHQ--------DRTPMHLAAE 150
+ + + + A L ++ + H T +HLA+
Sbjct: 61 AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120
Query: 151 NGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL------NKKGIENYN 204
+G+ I+ELL + LHLA D+V LLL N+ + Y+
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180
Query: 205 VLHLAAMYSREDVVKLLLNKKGINVAAL 232
L + + L N+ L
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQML 208
Score = 39.1 bits (89), Expect = 3e-04
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 25/129 (19%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYG-TSVDIQNGEGQTALHIASAEGDEALVKYFYGAKA 77
NG T LHLA+ L +V +LV G + G+TALH+A + LV A
Sbjct: 110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA 169
Query: 78 NASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF--YGAKANAS 135
+ + + +G + + + + +
Sbjct: 170 DVNRVTY----------------------QGYSPYQLTWGRPSTRIQQQLGQLTLENLQM 207
Query: 136 ITDHQDRTP 144
+ + +D
Sbjct: 208 LPESEDEES 216
Score = 36.4 bits (82), Expect = 0.003
Identities = 4/29 (13%), Positives = 8/29 (27%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVDYG 43
T G + L + + + L
Sbjct: 173 RVTYQGYSPYQLTWGRPSTRIQQQLGQLT 201
Score = 28.3 bits (61), Expect = 1.1
Identities = 7/43 (16%), Positives = 21/43 (48%)
Query: 201 ENYNVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLTGRPDL 243
+ + LHLA ++ + + ++ + ++A L ++ + L
Sbjct: 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPL 43
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 65.2 bits (157), Expect = 3e-13
Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 20/206 (9%)
Query: 35 MVRILVDYGTSVDI-QNGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAA 93
++ L+ G ++ + G+T+LH+A+ K A A+A+ D+ G AA
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63
Query: 94 AGTSVLANCLL------------MGEGQTALHIASAEGDEALVKYFYGAKANASITDHQD 141
+ + M +G T L +A+ E +V+ A A+ + D+
Sbjct: 64 VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123
Query: 142 RTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYSREDVVKLLL------ 195
+T +H AA + + + A+ + ++ L LAA + K LL
Sbjct: 124 KTALHWAAAVNNTEAVN-ILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182
Query: 196 NKKGIENYNVLHLAAMYSREDVVKLL 221
+ +A+ D+V+LL
Sbjct: 183 EITDHMDRLPRDVASERLHHDIVRLL 208
Score = 61.3 bits (147), Expect = 7e-12
Identities = 47/188 (25%), Positives = 72/188 (38%), Gaps = 13/188 (6%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKAN 78
G+T+LHLAAR D + L+D G + Q+ G+T LH A A + + +A
Sbjct: 22 TGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRAT 81
Query: 79 ASITDHQGIQRDIAAAGTSVLANCLLM------------GEGQTALHIASAEGDEALVKY 126
+ A + + G+TALH A+A + V
Sbjct: 82 NLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNI 141
Query: 127 FYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKENYNVLHLAAMYS 186
AN D +D TP+ LAA G + L D A+ + +A+
Sbjct: 142 LLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDN-FANREITDHMDRLPRDVASERL 200
Query: 187 REDVVKLL 194
D+V+LL
Sbjct: 201 HHDIVRLL 208
Score = 39.4 bits (90), Expect = 2e-04
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Query: 116 SAEGDEALVKYF--YGAKANASITDHQDRTPMHLAAENGHASIIELL 160
+A+ ++ GA+ NA+ D T +HLAA A + L
Sbjct: 1 TAQ----VISDLLAQGAELNAT-MDKTGETSLHLAARFARADAAKRL 42
Score = 35.9 bits (81), Expect = 0.003
Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 1 IWELLSTQTAEQLKATTINGDTALHLAARKRDLDMVRIL 39
+ L A + T +A+ + D+VR+L
Sbjct: 171 ASKALLDNFAN-REITDHMDRLPRDVASERLHHDIVRLL 208
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 61.0 bits (146), Expect = 4e-12
Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 12/153 (7%)
Query: 19 NGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKAN 78
+ L AAR D VRIL+ G G + LH+A+ G + + A +
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDW-LGTSPLHLAAQYGHFSTTEVLLRAGVS 59
Query: 79 ASITDHQGIQRDIAAAGTSVLA-----------NCLLMGEGQTALHIASAEGDEALVKYF 127
AA TALH A+ + +V+
Sbjct: 60 RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119
Query: 128 YGAKANASITDHQDRTPMHLAAENGHASIIELL 160
A+ +T ++ +NG+ + E+L
Sbjct: 120 IKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 39.1 bits (89), Expect = 2e-04
Identities = 35/176 (19%), Positives = 66/176 (37%), Gaps = 30/176 (17%)
Query: 52 EGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTA 111
+ L A+ G + V+ A + G +
Sbjct: 1 DLGKKLLEAARAGQDDEVRILMANGAPFTTDWL-----------------------GTSP 37
Query: 112 LHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFER 171
LH+A+ G + + A + DRTP+H+AA GHA+I+E+ K A + +
Sbjct: 38 LHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEV-LLKHGADVNAK 96
Query: 172 TKENYNVLHLAAMYSREDVVKLL------LNKKGIENYNVLHLAAMYSREDVVKLL 221
LH A ++ ++VV+LL ++ + ++ ED+ ++L
Sbjct: 97 DMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 34.4 bits (77), Expect = 0.006
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 13 LKATTINGDTALHLAARKRDLDMVRIL 39
+ + TA ++ + D+ IL
Sbjct: 126 VHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 27.5 bits (59), Expect = 1.3
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 206 LHLAAMYSREDVVKLLLNK 224
L AA ++D V++L+
Sbjct: 6 LLEAARAGQDDEVRILMAN 24
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 58.4 bits (139), Expect = 3e-11
Identities = 25/153 (16%), Positives = 42/153 (27%), Gaps = 11/153 (7%)
Query: 22 TALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKY---------- 71
L AA + DL+ + L+ +V+ QNG G+TAL + E +
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 72 -FYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGA 130
G + N A +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122
Query: 131 KANASITDHQDRTPMHLAAENGHASIIELLADK 163
+N +H+ T LA G ++ L+
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155
Score = 44.9 bits (104), Expect = 2e-06
Identities = 21/170 (12%), Positives = 35/170 (20%), Gaps = 17/170 (10%)
Query: 55 TALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHI 114
L A+A GD + N + + G + L+ G
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62
Query: 115 ASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIFERTKE 174
G D +
Sbjct: 63 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNI--------------EDNEGNLPLHLAAK 108
Query: 175 NYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLLNK 224
++ + + N KG LA +Y R +VV L+
Sbjct: 109 EGHLRVVEFLVKHTASNVGHRNHKG---DTACDLARLYGRNEVVSLMQAN 155
Score = 38.7 bits (88), Expect = 2e-04
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 12 QLKATTINGDTALHLAARKRDLDMVRILVDYG 43
+ GDTA LA ++V ++ G
Sbjct: 125 NVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 32.2 bits (71), Expect = 0.045
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 204 NVLHLAAMYSREDVVKLLLNKKGINVAA 231
N L AA + + LL + +NV A
Sbjct: 3 NELASAAARGDLEQLTSLL-QNNVNVNA 29
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 56.7 bits (135), Expect = 2e-10
Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 12/152 (7%)
Query: 20 GDTALHLAARKRDLDMVRILVD-YGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKAN 78
L AA + D+ VR L+ D N G+TAL + ++ +
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 79 ASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEAL----------VKYFY 128
AA + +L+ G +++ G + V F
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD-VNVPDGTGALPIHLAVQEGHTAVVSFL 120
Query: 129 GAKANASITDHQDRTPMHLAAENGHASIIELL 160
A+++ D + TP+ LA + G ++++L
Sbjct: 121 AAESDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 35.9 bits (81), Expect = 0.002
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 13 LKATTINGDTALHLAARKRDLDMVRILVD 41
L G T L LA ++ D+V IL
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 33.6 bits (75), Expect = 0.014
Identities = 24/153 (15%), Positives = 41/153 (26%), Gaps = 37/153 (24%)
Query: 108 GQTALHIASAEGDEALVKYFYGAK-ANASITDHQDRTPMHLAAENGHASIIELLADKFRA 166
L A+A GD V+ + + + +T + + A +ELL
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61
Query: 167 -------------------------------SIFERTKENYNVLHLAAMYSREDVVKLL- 194
+ +HLA VV L
Sbjct: 62 NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121
Query: 195 ----LNKKGIENYNVLHLAAMYSREDVVKLLLN 223
L+++ L LA +D+V +L
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 31.3 bits (69), Expect = 0.082
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 204 NVLHLAAMYSREDVVKLLLNKKGINVAALGGEDLT 238
+ L AA V+ LL+++ ++ AL T
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT 38
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 51.1 bits (121), Expect = 1e-08
Identities = 30/169 (17%), Positives = 52/169 (30%), Gaps = 33/169 (19%)
Query: 22 TALHLAARKRDLDMVRILVDYGTSVDIQ------NGEGQTALHIASAEGDEA---LVKYF 72
+L A + RD+ + G + + + +TALH+A D +V +
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 73 YGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKA 132
N +G LH + +K KA
Sbjct: 68 VQNSGNLDKQTGKGSTA----------------------LHYCCLTDNAECLKLLLRGKA 105
Query: 133 NASITDHQDRTPMHLAAENGHASIIELL--ADKFRASIFERTKENYNVL 179
+ I + TP+ +A H ELL A R + + + +L
Sbjct: 106 SIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYEWRLL 154
Score = 41.9 bits (97), Expect = 2e-05
Identities = 24/152 (15%), Positives = 43/152 (28%), Gaps = 20/152 (13%)
Query: 50 NGEGQTALHIASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQ 109
+L A D + Y + + + +
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHE----------------PDE 46
Query: 110 TALHIASAEGDEA---LVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRA 166
TALH+A D +V + N + T +H +A ++L + +A
Sbjct: 47 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL-LLRGKA 105
Query: 167 SIFERTKENYNVLHLAAMYSREDVVKLLLNKK 198
SI + L +A E +LL
Sbjct: 106 SIEIANESGETPLDIAKRLKHEHCEELLTQAL 137
Score = 41.5 bits (96), Expect = 2e-05
Identities = 18/130 (13%), Positives = 31/130 (23%), Gaps = 14/130 (10%)
Query: 110 TALHIASAEGDEALVKYFYGAKAN------ASITDHQDRTPMHLAAEN---GHASIIELL 160
+L A D + Y + + D T +HLA + I++ L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 161 AD-----KFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSRE 215
+ + A K + L +A E
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127
Query: 216 DVVKLLLNKK 225
+LL
Sbjct: 128 HCEELLTQAL 137
Score = 36.9 bits (84), Expect = 9e-04
Identities = 31/118 (26%), Positives = 43/118 (36%), Gaps = 25/118 (21%)
Query: 19 NGDTALHLAARKRD---LDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGA 75
+TALHLA R D L +V LV ++D Q G+G TALH + +K
Sbjct: 44 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG 103
Query: 76 KANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYFYGAKAN 133
KA+ I + G+T L IA E + A +
Sbjct: 104 KASIEIANE----------------------SGETPLDIAKRLKHEHCEELLTQALSG 139
Score = 33.4 bits (75), Expect = 0.015
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 8/45 (17%)
Query: 15 ATTINGDTALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHI 59
+G+T L +A R + +L Q G+ H+
Sbjct: 109 IANESGETPLDIAKRLKHEHCEELL--------TQALSGRFNSHV 145
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 43.8 bits (101), Expect = 2e-06
Identities = 16/121 (13%), Positives = 30/121 (24%), Gaps = 5/121 (4%)
Query: 108 GQTALHIASAEGDEALVKYF--YGAKANASITDHQDRTPMHLA---AENGHASIIELLAD 162
L A+A G V+ GA NA + + + + + +
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 163 KFRASIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLHLAAMYSREDVVKLLL 222
+ R + L+ + + LA DV + L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 223 N 223
Sbjct: 123 A 123
Score = 43.8 bits (101), Expect = 3e-06
Identities = 25/119 (21%), Positives = 36/119 (30%), Gaps = 11/119 (9%)
Query: 53 GQTALHIASAEGDEALVKYF--YGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQT 110
L A+A G V+ GA NA + + + + V LL G
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 111 ALHIASAEGDEALVKYF---------YGAKANASITDHQDRTPMHLAAENGHASIIELL 160
A+ + A A + D R P+ LA E GH + L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121
Score = 30.7 bits (67), Expect = 0.093
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 19 NGDTALHLAARKRDLDMVRIL 39
G + LA D+ R L
Sbjct: 101 WGRLPVDLAEELGHRDVARYL 121
Score = 30.7 bits (67), Expect = 0.096
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 173 KENYNVLHLAAMYSREDVVKLLLNKKGIENYNVLH 207
+ + + L AA R + V+ LL N +
Sbjct: 1 EPSADWLATAAARGRVEEVRALLEAGANPNAPNSY 35
Score = 28.8 bits (62), Expect = 0.40
Identities = 5/25 (20%), Positives = 13/25 (52%)
Query: 47 DIQNGEGQTALHIASAEGDEALVKY 71
D+++ G+ + +A G + +Y
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARY 120
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 41.6 bits (96), Expect = 2e-05
Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 22 TALHLAARKRDLDMVRILVDYGTSVDIQNGEGQTALHIASAEGDEALVKYFYGAKANASI 81
L ++ + + D+V+ ++ + N EG TALH A G +VK+ N +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 82 TDHQG--------------IQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVKYF 127
D G + + + +G +V A + EG ++
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 128 YGAKAN 133
YG +
Sbjct: 123 YGVQEK 128
Score = 36.2 bits (82), Expect = 0.001
Identities = 17/124 (13%), Positives = 38/124 (30%), Gaps = 8/124 (6%)
Query: 110 TALHIASAEGDEALVKYFYGAKANASITDHQDRTPMHLAAENGHASIIELLADKFRASIF 169
L +S EG+ LV+ + S+ + + T +H A GH I++ L
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 170 ERTKENYNVLHLAAMYSREDVVKLL--------LNKKGIENYNVLHLAAMYSREDVVKLL 221
+ + A+ + + L+ + ++ + L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 222 LNKK 225
+
Sbjct: 123 YGVQ 126
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 38.7 bits (88), Expect = 2e-04
Identities = 16/117 (13%), Positives = 31/117 (26%), Gaps = 11/117 (9%)
Query: 20 GDTALHLAARKRDLDMVRILVD-----------YGTSVDIQNGEGQTALHIASAEGDEAL 68
D A + DLD V+ V + GQ + +
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61
Query: 69 VKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHIASAEGDEALVK 125
++G + + + +G TAL + +AL++
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
Score = 29.9 bits (65), Expect = 0.16
Identities = 4/22 (18%), Positives = 7/22 (31%)
Query: 143 TPMHLAAENGHASIIELLADKF 164
A +NG ++ K
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKG 25
>d1s9ra_ d.126.1.4 (A:) Arginine deiminase {Mycoplasma arginini
[TaxId: 2094]}
Length = 409
Score = 28.6 bits (63), Expect = 1.0
Identities = 33/267 (12%), Positives = 71/267 (26%), Gaps = 44/267 (16%)
Query: 4 LLSTQTAEQLKATTINGDTALHLAARKRDLDMVRILVD----YGTSVDIQNGEGQTALHI 59
L + +T+ +L + G T L +V + + + NG +
Sbjct: 117 LKAKKTSRELVEIMMAGITKYDLGIEADHELIVDPMPNLYFTRDPFASVGNGVTIHYMRY 176
Query: 60 ASAEGDEALVKYFYGAKANASITDHQGIQRDIAAAGTSVLANCLLMGEGQTALHI---AS 116
+ + ++ + +N + D + + + + + +
Sbjct: 177 KVRQRETLFSRFVF---SNHPKLINTPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTD 233
Query: 117 AEGDEALVKYFYGAKANASITDHQDRTP-----MHL-----AAENGHASIIELLADKFRA 166
+ L K K P MHL + + D F+
Sbjct: 234 LQTVTLLAKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIANDVFKF 293
Query: 167 SIFERTKENYNVLHLAAMYSREDVVKLLLNKKGIE--------------------NYNVL 206
++ + E +++ ++NKK + N L
Sbjct: 294 WDYDLVNGGAEPQPVENGLPLEGLLQSIINKKPVLIPIAGEGASQMEIERETHFDGTNYL 353
Query: 207 HLA----AMYSREDVVKLLLNKKGINV 229
+ YSR + L GI V
Sbjct: 354 AIRPGVVIGYSRNEKTNAALEAAGIKV 380
>d1aopa2 d.58.36.1 (A:346-425) Sulfite reductase, domains 1 and 3
{Escherichia coli [TaxId: 562]}
Length = 80
Score = 24.3 bits (53), Expect = 8.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 280 LRALLSTAGREIRMTVDGTLILYYRGKDSKAQIEEL 315
L + + R+T + LI+ + KA+IE++
Sbjct: 34 LLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKI 69
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.363
Gapped
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,049,133
Number of extensions: 45592
Number of successful extensions: 455
Number of sequences better than 10.0: 1
Number of HSP's gapped: 255
Number of HSP's successfully gapped: 130
Length of query: 315
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 230
Effective length of database: 1,240,546
Effective search space: 285325580
Effective search space used: 285325580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.1 bits)