BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12900
(344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P2B1|TNPO3_MOUSE Transportin-3 OS=Mus musculus GN=Tnpo3 PE=1 SV=1
Length = 923
Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/286 (48%), Positives = 191/286 (66%), Gaps = 10/286 (3%)
Query: 48 KTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLGSI 107
+T ++ D R++E RCLR+A+RCVGK A LL+PLV Q+V +Y H HS FLYLGSI
Sbjct: 647 ETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSI 706
Query: 108 LVDEYATSH-CVSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQRAPIA 166
LVDEY C GLLDM+QA PT+ +L++++GL+NHPDTVDDLFRL TRF+QR+P+
Sbjct: 707 LVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVT 766
Query: 167 FLTSSFISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVSEEDFDM 226
L S + ++Q I +T LDHR+ANS+VM+F DLIH V +D EEDF++
Sbjct: 767 LLRSQVVIPILQWAIASTTLDHRDANSSVMRFLRDLIHTG-VANDH--------EEDFEL 817
Query: 227 RHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQDTIS 286
R L+ ++S+ GQ LVS LL C F L Y + DVA+VL+E++ VDR +WL++++
Sbjct: 818 RKELIGQVMSQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLK 877
Query: 287 QLPKNTPAGMNAATPEQLIEFHSQVTRSESAYDVGQALKELSRLYR 332
LPK T G T +QL +FH QVT +E V AL++ +RL+R
Sbjct: 878 GLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 923
>sp|Q9Y5L0|TNPO3_HUMAN Transportin-3 OS=Homo sapiens GN=TNPO3 PE=1 SV=3
Length = 923
Score = 277 bits (708), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 137/286 (47%), Positives = 190/286 (66%), Gaps = 10/286 (3%)
Query: 48 KTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLGSI 107
+T ++ D R++E RCLR+A+RCVGK A LL+PLV Q+V +Y H HS FLYLGSI
Sbjct: 647 ETLNKHRADNRIVERCCRCLRFAVRCVGKGSAALLQPLVTQMVNVYHVHQHSCFLYLGSI 706
Query: 108 LVDEYATSH-CVSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQRAPIA 166
LVDEY C GLLDM+QA PT+ +L++++GL+NHPDTVDDLFRL TRF+QR+P+
Sbjct: 707 LVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQQNGLQNHPDTVDDLFRLATRFIQRSPVT 766
Query: 167 FLTSSFISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVSEEDFDM 226
L S + ++Q I +T LDHR+AN +VM+F DLIH V +D EEDF++
Sbjct: 767 LLRSQVVIPILQWAIASTTLDHRDANCSVMRFLRDLIHTG-VANDH--------EEDFEL 817
Query: 227 RHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQDTIS 286
R L+ ++++ GQ LVS LL C F L Y + DVA+VL+E++ VDR +WL++++
Sbjct: 818 RKELIGQVMNQLGQQLVSQLLHTCCFCLPPYTLPDVAEVLWEIMQVDRPTFCRWLENSLK 877
Query: 287 QLPKNTPAGMNAATPEQLIEFHSQVTRSESAYDVGQALKELSRLYR 332
LPK T G T +QL +FH QVT +E V AL++ +RL+R
Sbjct: 878 GLPKETTVGAVTVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR 923
>sp|Q8K0C1|IPO13_MOUSE Importin-13 OS=Mus musculus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 38/303 (12%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S L L
Sbjct: 688 IQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTVPQASALDLT 747
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T ++ Q+ G ++HPD VD +L + L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLLVTSV---TLSLFQQ--GPRDHPDIVDSFMQLLAQALK 802
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P FL + +V QC +LA FF +L+ + G+ ++V
Sbjct: 803 RKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL-------PRCGEIESVG 855
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V + G+ L+ +L+A +M AD+L+ L + + W
Sbjct: 856 K------------VVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMW 903
Query: 281 LQDTISQLPKNTPAGMNAA--TPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYRKHMKY 337
+++ + P G +A +PEQ F Q+ R + V + +KE + L R
Sbjct: 904 IKEALQ------PPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGT 957
Query: 338 NYS 340
+Y+
Sbjct: 958 DYT 960
>sp|O94829|IPO13_HUMAN Importin-13 OS=Homo sapiens GN=IPO13 PE=1 SV=3
Length = 963
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 38/303 (12%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S L L
Sbjct: 688 IQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLT 747
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T + Q+ G ++HPD VD +L + L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLLVTSV---TLTLFQQ--GPRDHPDIVDSFMQLLAQALK 802
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P FL + +V QC +LA FF +L+ + G+ ++V
Sbjct: 803 RKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL-------PRCGEVESVG 855
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V + G+ L+ +L+A +M AD+L+ L + + W
Sbjct: 856 K------------VVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMW 903
Query: 281 LQDTISQLPKNTPAGMNAA--TPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYRKHMKY 337
+++ + P G +A +PEQ F Q+ R + V + +KE + L R
Sbjct: 904 IKEALQ------PPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGT 957
Query: 338 NYS 340
+Y+
Sbjct: 958 DYT 960
>sp|Q5R974|IPO13_PONAB Importin-13 OS=Pongo abelii GN=IPO13 PE=2 SV=1
Length = 963
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 38/303 (12%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S L L
Sbjct: 688 IQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLT 747
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T + Q+ G ++HPD VD +L + L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLLVTSV---TLTLFQQ--GPRDHPDIVDSFMQLLAQALK 802
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P FL + +V QC +LA FF +L+ + G+ ++V
Sbjct: 803 RKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL-------PRCGEVESVG 855
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V + G+ L+ +L+A +M AD+L+ L + + W
Sbjct: 856 K------------VVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMW 903
Query: 281 LQDTISQLPKNTPAGMNAA--TPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYRKHMKY 337
+++ + P G +A +PEQ F Q+ R + V + +KE + L R
Sbjct: 904 IKEALQ------PPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGT 957
Query: 338 NYS 340
+Y+
Sbjct: 958 DYT 960
>sp|Q9JM04|IPO13_RAT Importin-13 OS=Rattus norvegicus GN=Ipo13 PE=2 SV=1
Length = 963
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 38/303 (12%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S L L
Sbjct: 688 IQKVLSKWLSDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTVPQASALDLT 747
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T ++ Q+ G ++HPD VD +L + L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLLVTSV---TLSLFQQ--GPRDHPDIVDSFMQLLAQALK 802
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P F + +V QC +LA FF +L+ + G+ ++V
Sbjct: 803 RKPDLFQCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL-------PRCGEIESVG 855
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V + G+ L+ +L+A +M AD+L+ L + + W
Sbjct: 856 K------------VVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSMW 903
Query: 281 LQDTISQLPKNTPAGMNAA--TPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYRKHMKY 337
+++ + P G +A +PEQ F Q+ R + V + +KE + L R
Sbjct: 904 IKEALQ------PPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGT 957
Query: 338 NYS 340
+Y+
Sbjct: 958 DYT 960
>sp|A7YWD2|IPO13_BOVIN Importin-13 OS=Bos taurus GN=IPO13 PE=2 SV=1
Length = 963
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 34/301 (11%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S L L
Sbjct: 688 IQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLT 747
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T + Q+ G ++HPD VD +L + L+
Sbjct: 748 RQLVHIFAHEPAHFPPIEALFLLVTSV---TLTLFQQ--GPRDHPDIVDSFMQLLAQALK 802
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P FL + +V QC +LA FF +L+ + G+ + V
Sbjct: 803 RKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELL-------PRCGEVEPVG 855
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V + G+ L+ +L+A +M AD+L+ L + + W
Sbjct: 856 K------------VVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSVW 903
Query: 281 LQDTISQLPKNTPAGMNAATPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYRKHMKYNY 339
+++ + Q P A + +PEQ F Q+ R + V + +KE + L R +Y
Sbjct: 904 IKEAL-QAPGFPSARL---SPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGTDY 959
Query: 340 S 340
+
Sbjct: 960 T 960
>sp|Q5ZIC8|IPO13_CHICK Importin-13 OS=Gallus gallus GN=IPO13 PE=2 SV=1
Length = 958
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 38/295 (12%)
Query: 46 IFKTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLG 105
I K + DA+V+E +++ + DFA ++ L + + +YS P +S + L
Sbjct: 683 IQKVLSKWLNDAQVVESVCAIFEKSVKTLLDDFAPMVPQLCEMLGQMYSTIPQASAIDLT 742
Query: 106 SILVDEYATSHC----VSGLLDMVQAFLPPTYAILQEEDGLKNHPDTVDDLFRLCTRFLQ 161
LV +A + L +V + T + Q+ G ++HPD VD +L + L+
Sbjct: 743 RQLVHIFAHEPAHFPPIKALFLLVTSV---TLTLFQQ--GPRDHPDIVDSFMQLLAQALK 797
Query: 162 RAPIAFLTSSF-ISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVS 220
R P FL S+ + ++ CG+L+ FF +L+ + G+ V
Sbjct: 798 RKPDLFLCSNLDVKALFHCGVLSLKFPEAPTVKASCGFFTELL-------PRCGEIAPVG 850
Query: 221 EEDFDMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQW 280
+ +V ++G+ L+ +L+ +M A++L+ L + W
Sbjct: 851 Q------------VVHENGKVLLQAVLEGVGGQASRSLMDHFAEILFALNKHCFSYLSIW 898
Query: 281 LQDTISQLPKNTPAGMNAA--TPEQLIEFHSQVTRSE-SAYDVGQALKELSRLYR 332
+++ + Q G +A +PEQ F Q+ R + V + +KE + L R
Sbjct: 899 IKEAMQQ------DGFPSARVSPEQKETFSQQILRERVNKRRVKEMVKEFTLLCR 947
>sp|Q9USZ2|YNR7_SCHPO Uncharacterized protein C11G11.07 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC11G11.07 PE=4 SV=2
Length = 955
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 48 KTCETYQQDARVMEHSSRCLRYAIRCVGKDFAHLLEPLVKQIVVLYSKHPHSSFLYLGSI 107
+T +T+ D + E S+ L+ I + L + + ++ + K + FL++
Sbjct: 659 RTLDTFS-DVLICERISKLLKNFIYTFKEKAIVTLPVITEALIKGFEKTQYGCFLWVSGA 717
Query: 108 LVDEYATSHCVSGLLDMVQAFLPPTYAIL---QEEDGLKNHPDTVDDLFRLCTRFLQRAP 164
V ++ L V +F+ + K PD +DD FRL L P
Sbjct: 718 CVRQFGVPEMDEQTLSAVWSFVGKQCTNMFYYMSNKNPKEIPDVIDDFFRLMMDALLANP 777
Query: 165 IAFLTSSFISSVMQCGILATHLDHREANSTVMKFFYDLIHNNRVLSDKDGKKKAVSEEDF 224
L S + S++Q +++ L+ +E TV+ F DL+ ++ E
Sbjct: 778 QMVLESQMLESLIQAAMMSLQLEQQEPLQTVLNFLQDLLAFAL-----HTPPYSLIEPLP 832
Query: 225 DMRHRLMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELI----SVDRQVSNQW 280
D + + D++ K+ Q L L VF+ ++D + VL LI + D + ++
Sbjct: 833 DSLLKSLADLLLKNSQELYIILFNGMVFTFPRDNISDASAVLIPLIRLVFAADPSLCIKY 892
Query: 281 LQDTISQLPKNT 292
+ + + QLP T
Sbjct: 893 MSNVLDQLPAMT 904
>sp|P77439|PTFX1_ECOLI Multiphosphoryl transfer protein 1 OS=Escherichia coli (strain K12)
GN=fryA PE=1 SV=1
Length = 831
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 206 NRVLSDKDGKKKAV--------SEEDFDMR-HRLMKDIVSKHGQALVSNLLQACVFSLHT 256
N+ L ++DG+ K + +++F RLM + G A++SN+ Q C
Sbjct: 167 NQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVCA----- 221
Query: 257 YMMADVADVLYELISVDRQVSNQWLQDTISQL-PKN 291
+ A +D L E +S R +S Q L T +L P+N
Sbjct: 222 KLSASASDYLRERVSDIRDISEQLLHITWPELKPRN 257
>sp|Q83QP3|PTFAX_SHIFL Multiphosphoryl transfer protein OS=Shigella flexneri GN=fryA PE=3
SV=1
Length = 831
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 206 NRVLSDKDGKKKAV--------SEEDFDMR-HRLMKDIVSKHGQALVSNLLQACVFSLHT 256
N+ L ++DG+ K + +++F RLM + G A++SN+ Q C
Sbjct: 167 NQQLRERDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQVC-----A 221
Query: 257 YMMADVADVLYELISVDRQVSNQWLQDTISQL-PKNT 292
+ A +D L E +S R +S Q L T +L P+N
Sbjct: 222 KLSASASDYLRERVSDIRDISEQLLHITWPELKPRNN 258
>sp|Q3ALL6|CHLN_SYNSC Light-independent protochlorophyllide reductase subunit N
OS=Synechococcus sp. (strain CC9605) GN=chlN PE=3 SV=1
Length = 425
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
Query: 89 IVVLYSKHPHSSFLYLGSILVDEYATSHCVSGLLDMVQAFLPPTY--AILQEEDGLKNHP 146
IV L+ + P + FL +GS +H + V F P + AIL E D L
Sbjct: 22 IVWLHRRMPDAFFLVVGS-----RTCAHLIQSAAG-VMIFAEPRFGTAILSERD-LAGLA 74
Query: 147 DTVDDLFRLCTRFLQRAP---IAFLTSSFISSVMQ 178
D D+L R+C LQR P FL S S V++
Sbjct: 75 DAHDELDRVCKELLQRRPEIRTLFLVGSCPSEVIK 109
>sp|Q9MUC0|PSAA_GINBI Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Ginkgo
biloba GN=psaA PE=3 SV=1
Length = 721
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D +++ + D V +H A+VS+L AC+F S Y+ D L +
Sbjct: 402 VRDYDPTIQYNNLLDRVLRHRDAIVSHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 461
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q + QW+Q+T + P +T G A+T
Sbjct: 462 DTAIQLQPIFAQWIQNTHASAPSSTAPGAAAST 494
>sp|Q332X8|PSAA_LACSA Photosystem I P700 chlorophyll a apoprotein A1 OS=Lactuca sativa
GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q1KXV9|PSAA_HELAN Photosystem I P700 chlorophyll a apoprotein A1 OS=Helianthus annuus
GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q8S8X4|PSAA_ATRBE Photosystem I P700 chlorophyll a apoprotein A1 OS=Atropa belladonna
GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|P06405|PSAA_TOBAC Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana tabacum
GN=psaA PE=3 SV=2
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|P06511|PSAA_SPIOL Photosystem I P700 chlorophyll a apoprotein A1 OS=Spinacia oleracea
GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPSATAPGATAST 503
>sp|Q33C36|PSAA_NICTO Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana
tomentosiformis GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q3C1H8|PSAA_NICSY Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana
sylvestris GN=psaA PE=3 SV=1
Length = 750
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q06RD1|PSAA_JASNU Photosystem I P700 chlorophyll a apoprotein A1 OS=Jasminum
nudiflorum GN=psaA PE=3 SV=1
Length = 750
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q27S50|PSAA_SOLTU Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum tuberosum
GN=psaA PE=3 SV=1
Length = 750
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q2MIA0|PSAA_SOLLC Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum
lycopersicum GN=psaA PE=3 SV=1
Length = 750
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q2MII7|PSAA_SOLBU Photosystem I P700 chlorophyll a apoprotein A1 OS=Solanum
bulbocastanum GN=psaA PE=3 SV=1
Length = 750
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|A0A335|PSAA_COFAR Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea arabica
GN=psaA PE=3 SV=1
Length = 750
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q7U7I0|GLMU_SYNPX Bifunctional protein GlmU OS=Synechococcus sp. (strain WH8102)
GN=glmU PE=3 SV=1
Length = 450
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 188 HREANSTVMKF---FYDLIHNNRVLSDKDGKKKAVSEEDFDMRHRLMKDIVSKHGQALVS 244
HRE+ + V D RV D DGK A+ E HR + + L +
Sbjct: 119 HRESGADVTLLTARLEDPTGYGRVFVDADGKVSAIVE------HRDCSE------EQLSN 166
Query: 245 NLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQDTISQLPK 290
NL A ++ + +A+V +S D +L DT++ LPK
Sbjct: 167 NLTNAGIYCFNWQALAEV----LPKLSTDNDQGELYLTDTVAMLPK 208
>sp|Q14FF7|PSAA_POPAL Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba
GN=psaA PE=3 SV=1
Length = 750
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P+ T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPRATAPGATAST 503
>sp|Q09MH8|PSAA_CITSI Photosystem I P700 chlorophyll a apoprotein A1 OS=Citrus sinensis
GN=psaA PE=3 SV=1
Length = 750
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGGTAPGATAST 503
>sp|Q7YJX2|PSAA_CALFG Photosystem I P700 chlorophyll a apoprotein A1 OS=Calycanthus
floridus var. glaucus GN=psaA PE=3 SV=1
Length = 750
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q + QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPIFAQWVQNTHALAPSATAPGATAST 503
>sp|Q9WXB4|BCHN_ACIRU Light-independent protochlorophyllide reductase subunit N
OS=Acidiphilium rubrum GN=bchN PE=3 SV=1
Length = 422
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 14/108 (12%)
Query: 89 IVVLYSKHPHSSFLYLGSILVDEYATSHCVSGLLDMVQAFLPPTYA--ILQEEDGLKNHP 146
IV L+ + + FL +GS +H V V F P +A I++E D L
Sbjct: 31 IVWLHRRIQDAFFLVVGS-----RTCAHLVQSAAG-VMIFAEPRFATAIIEERD-LAGRA 83
Query: 147 DTVDDLFRLCTRFLQRAP---IAFLTSSFISSVMQCGIL--ATHLDHR 189
D D+L R+ TR ++R P + FL S S V++ + A LD R
Sbjct: 84 DLDDELDRVVTRLIERRPDIKLLFLVGSCPSEVIKLDLTRAAARLDER 131
>sp|P05310|PSAA_PEA Photosystem I P700 chlorophyll a apoprotein A1 OS=Pisum sativum
GN=psaA PE=1 SV=2
Length = 758
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 419 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 478
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 479 DTAIQLQPVFAQWIQNTHALAPGTTAPGATAST 511
>sp|A4GYV4|YCF2_POPTR Protein ycf2 OS=Populus trichocarpa GN=ycf2-1 PE=3 SV=1
Length = 2285
Score = 32.0 bits (71), Expect = 7.2, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 241 ALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQDTISQLPKNTPAGMNAAT 300
+++ N + FS +T ++ + +Y LI + V+ W+ D I L N+ + ++
Sbjct: 1462 SIIPNPINRITFSRNTRHLSHTSKEIYSLIRKRKNVNGDWIDDKIESLVANSDS-IDDKE 1520
Query: 301 PEQLIEFHSQVTRSESAYDVGQALKELSRLYRKHMKYNYS 340
E L++F + T + Q L LS + H+ N S
Sbjct: 1521 REFLVQFSTLTTEKR----IDQIL--LSLTHSDHLSKNDS 1554
>sp|Q14F97|YCF2_POPAL Protein ycf2 OS=Populus alba GN=ycf2-A PE=3 SV=1
Length = 2282
Score = 32.0 bits (71), Expect = 7.2, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 241 ALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQDTISQLPKNTPAGMNAAT 300
+++ N + FS +T ++ + +Y LI + V+ W+ D I L N+ + ++
Sbjct: 1459 SIIPNPINRITFSRNTRHLSHTSKEIYSLIRKRKNVNGDWIDDKIESLVANSDS-IDDKE 1517
Query: 301 PEQLIEFHSQVTRSESAYDVGQALKELSRLYRKHMKYNYS 340
E L++F + T + Q L LS + H+ N S
Sbjct: 1518 REFLVQFSTLTTEKR----IDQIL--LSLTHSDHLSKNDS 1551
>sp|Q09FW1|PSAA_NANDO Photosystem I P700 chlorophyll a apoprotein A1 OS=Nandina domestica
GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G +T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPSATAPGATTST 503
>sp|Q0ZJ20|PSAA_VITVI Photosystem I P700 chlorophyll a apoprotein A1 OS=Vitis vinifera
GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G +T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPSATAPGATTST 503
>sp|Q0G9W2|PSAA_DAUCA Photosystem I P700 chlorophyll a apoprotein A1 OS=Daucus carota
GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G +T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPSATAPGATTST 503
>sp|Q06GR0|PSAA_PIPCE Photosystem I P700 chlorophyll a apoprotein A1 OS=Piper cenocladum
GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q + QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPIFAQWIQNTHALAPSATAPGAIAST 503
>sp|Q2L907|PSAA_GOSHI Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium
hirsutum GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHTLAPGATAPGATAST 503
>sp|A0ZZ35|PSAA_GOSBA Photosystem I P700 chlorophyll a apoprotein A1 OS=Gossypium
barbadense GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHTLAPGATAPGATAST 503
>sp|A4GYR0|PSAA_POPTR Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus
trichocarpa GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L C+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G A+T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATAST 503
>sp|Q68S06|PSAA_PANGI Photosystem I P700 chlorophyll a apoprotein A1 OS=Panax ginseng
GN=psaA PE=3 SV=1
Length = 750
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 219 VSEEDFDMRHRLMKDIVSKHGQALVSNLLQACVF----SLHTYMMADVADVL------YE 268
V + D R+ + D V +H A++S+L AC+F S Y+ D L +
Sbjct: 411 VRDYDPTTRYNDLLDRVLRHRDAIISHLNWACIFLGFHSFGLYIHNDTMSALGRPQDMFS 470
Query: 269 LISVDRQ-VSNQWLQDTISQLPKNTPAGMNAAT 300
++ Q V QW+Q+T + P T G +T
Sbjct: 471 DTAIQLQPVFAQWIQNTHALAPGATAPGATTST 503
>sp|Q5JQC9|AKAP4_HUMAN A-kinase anchor protein 4 OS=Homo sapiens GN=AKAP4 PE=2 SV=1
Length = 854
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 230 LMKDIVSKHGQALVSNLLQACVFSLHTYMMADVADVLYELISVDRQVSNQWLQD 283
++K ++ +H + +VS+L+ +C+ +LH + D + + +V R + NQW Q+
Sbjct: 366 VLKRVLLRHTKEIVSDLIDSCMKNLHNITGVLMTDSDF-VSAVKRNLFNQWKQN 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,424,447
Number of Sequences: 539616
Number of extensions: 4653037
Number of successful extensions: 14196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 14178
Number of HSP's gapped (non-prelim): 50
length of query: 344
length of database: 191,569,459
effective HSP length: 118
effective length of query: 226
effective length of database: 127,894,771
effective search space: 28904218246
effective search space used: 28904218246
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)