Your job contains 1 sequence.
>psy12903
MADDNIEPDQASFDKGYSEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQ
YIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLDFRLIAEKSKDKLL
ELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQ
DADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAI
AHDFPEDKPPQIHLLYRPGHYDILYPL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12903
(267 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032214 - symbol:CG4968 species:7227 "Drosophila m... 752 1.5e-74 1
ZFIN|ZDB-GENE-040718-108 - symbol:otub1a "OTU domain, ubi... 672 4.5e-66 1
UNIPROTKB|J3KR44 - symbol:OTUB1 "Ubiquitin thioesterase O... 656 2.3e-64 1
UNIPROTKB|Q96FW1 - symbol:OTUB1 "Ubiquitin thioesterase O... 656 2.3e-64 1
UNIPROTKB|C5H0C6 - symbol:OTUB1 "Uncharacterized protein"... 656 2.3e-64 1
MGI|MGI:2147616 - symbol:Otub1 "OTU domain, ubiquitin ald... 656 2.3e-64 1
RGD|1311329 - symbol:Otub1 "OTU domain, ubiquitin aldehyd... 656 2.3e-64 1
ZFIN|ZDB-GENE-040718-204 - symbol:otub1b "OTU domain, ubi... 655 2.9e-64 1
UNIPROTKB|Q3T0Y1 - symbol:OTUB1 "OTU domain, ubiquitin al... 652 6.0e-64 1
UNIPROTKB|F1PIA2 - symbol:OTUB1 "Uncharacterized protein"... 648 1.6e-63 1
UNIPROTKB|F5GYN4 - symbol:OTUB1 "Ubiquitin thioesterase O... 636 3.0e-62 1
UNIPROTKB|F5H6Q1 - symbol:OTUB1 "Ubiquitin thioesterase O... 635 3.8e-62 1
UNIPROTKB|F5GYJ8 - symbol:OTUB1 "Ubiquitin thioesterase O... 525 1.7e-50 1
TAIR|locus:2010469 - symbol:AT1G28120 species:3702 "Arabi... 433 9.6e-41 1
UNIPROTKB|F1MZJ2 - symbol:OTUB2 "Uncharacterized protein"... 428 3.3e-40 1
RGD|1306688 - symbol:Otub2 "OTU domain, ubiquitin aldehyd... 423 1.1e-39 1
UNIPROTKB|F1PKV7 - symbol:OTUB2 "Uncharacterized protein"... 421 1.8e-39 1
MGI|MGI:1915399 - symbol:Otub2 "OTU domain, ubiquitin ald... 421 1.8e-39 1
UNIPROTKB|Q96DC9 - symbol:OTUB2 "Ubiquitin thioesterase O... 419 2.9e-39 1
UNIPROTKB|F1SCG8 - symbol:OTUB2 "Uncharacterized protein"... 416 6.1e-39 1
WB|WBGene00007718 - symbol:otub-1 species:6239 "Caenorhab... 396 8.0e-37 1
UNIPROTKB|Q9XVR6 - symbol:otub-1 "Ubiquitin thioesterase ... 396 8.0e-37 1
ASPGD|ASPL0000072605 - symbol:AN4784 species:162425 "Emer... 231 1.4e-18 1
GENEDB_PFALCIPARUM|PF11_0428 - symbol:PF11_0428 "hypothet... 111 0.00072 1
UNIPROTKB|Q8IHU8 - symbol:PF11_0428 "Conserved Plasmodium... 111 0.00072 1
>FB|FBgn0032214 [details] [associations]
symbol:CG4968 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0019538 "protein metabolic
process" evidence=IEA] InterPro:IPR016615 PIRSF:PIRSF013503
GO:GO:0006520 EMBL:AE014134 GO:GO:0008234 GO:GO:0006508
GO:GO:0008233 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0008242
InterPro:IPR019400 Pfam:PF10275 eggNOG:COG5539 MEROPS:C65.001
KO:K09602 GeneTree:ENSGT00390000006979 OMA:VVYLRLI EMBL:AY061382
RefSeq:NP_609375.1 UniGene:Dm.385 ProteinModelPortal:Q9VL00
SMR:Q9VL00 IntAct:Q9VL00 MINT:MINT-327859 STRING:Q9VL00
PaxDb:Q9VL00 PRIDE:Q9VL00 EnsemblMetazoa:FBtr0079987 GeneID:34384
KEGG:dme:Dmel_CG4968 UCSC:CG4968-RA FlyBase:FBgn0032214
InParanoid:Q9VL00 OrthoDB:EOG43N5VJ PhylomeDB:Q9VL00
GenomeRNAi:34384 NextBio:788236 Bgee:Q9VL00 GermOnline:CG4968
Uniprot:Q9VL00
Length = 262
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 144/255 (56%), Positives = 190/255 (74%)
Query: 22 NQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNL 81
N N+D+LI+QQ ++IEKEISD+ LV ++ + L +Y GDE++ K++DL++KY +
Sbjct: 7 NDGNRDELIIQQKRDIEKEISDTTPLVSEQLPLTCLYAEYSGDEIFTAKIQDLSKKYKFI 66
Query: 82 RRTRPDGNCFFRSFGFALLESLY-----HLDFRLIAEKSKDKLLELGFQKFTLEDFHDQF 136
RRTRPDGNCFFR+F ++ LE L + +F+ +AE+SK+KL++LGF FTLEDFH+ F
Sbjct: 67 RRTRPDGNCFFRAFAYSYLEYLISNTSAYQEFKKLAEESKEKLVQLGFPSFTLEDFHETF 126
Query: 137 MEVVNLISKPE-----TNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
MEV+ +S T +D L ++FN + YSDYVVVYLRLI SG+LQ++ADFYQNFIEG
Sbjct: 127 MEVIQRVSPDNAGGHSTVQDELHKIFNEQGYSDYVVVYLRLITSGKLQEEADFYQNFIEG 186
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
+ T+ F EVEPM+KESDHIHIIAL TAL GVRV Y+DRG+ AHDFPE P+
Sbjct: 187 DLTIEAFRHLEVEPMYKESDHIHIIALCTALGAGVRVEYLDRGEGGTVKAHDFPEGSEPR 246
Query: 252 IHLLYRPGHYDILYP 266
I+L+YRPGHYDILYP
Sbjct: 247 IYLIYRPGHYDILYP 261
>ZFIN|ZDB-GENE-040718-108 [details] [associations]
symbol:otub1a "OTU domain, ubiquitin aldehyde
binding 1a" species:7955 "Danio rerio" [GO:0019538 "protein
metabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR016615 PIRSF:PIRSF013503
ZFIN:ZDB-GENE-040718-108 InterPro:IPR003323 PROSITE:PS50802
GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400 Pfam:PF10275
MEROPS:C65.001 eggNOG:NOG267426 HOVERGEN:HBG053383 KO:K09602
OrthoDB:EOG47H5QS GeneTree:ENSGT00390000006979 HOGENOM:HOG000019496
EMBL:CR749775 EMBL:BC076168 IPI:IPI00508379 RefSeq:NP_001002411.1
UniGene:Dr.76620 SMR:Q6DH16 Ensembl:ENSDART00000077897
GeneID:436684 KEGG:dre:436684 CTD:436684 InParanoid:Q6DH16
OMA:MRIITSA NextBio:20831127 Uniprot:Q6DH16
Length = 267
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 133/265 (50%), Positives = 185/265 (69%)
Query: 7 EPDQASFDKGYSEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIG-DE 65
E Q + ++ N + D+ I+ Q I++EI+ SI LV +++++ VL+++Y D
Sbjct: 3 EEQQQEISQKEADGLNCLAYDEAIIAQQDKIQQEIATSISLVSERQELSVLKREYADEDT 62
Query: 66 VYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLD-----FRLIAEKSKDKLL 120
+Y+ K++DL +KYS++R+TRPDGNCF+R+FGF+ LESL F+ IA KSK L+
Sbjct: 63 IYQQKIRDLQKKYSSVRKTRPDGNCFYRAFGFSHLESLLEDSKELHRFKAIAAKSKLDLV 122
Query: 121 ELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQ 180
GF +FT+EDFH+ FM+++ K +T+ L+ FN + SDY+VVYLRL+ SG LQ+
Sbjct: 123 SQGFTEFTIEDFHNTFMDLIEACDK-QTSVGELLTSFNEQSVSDYLVVYLRLVTSGYLQR 181
Query: 181 DADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAI 240
+ DF+Q+FIEG RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+
Sbjct: 182 EEDFFQHFIEGGRTVREFCQQEVEPMSKESDHIHIIALAQALGVCIQVEYMDRGEGGTVN 241
Query: 241 AHDFPEDKPPQIHLLYRPGHYDILY 265
H FPE P+I LLYRPGHYDILY
Sbjct: 242 HHIFPEGGEPKIFLLYRPGHYDILY 266
>UNIPROTKB|J3KR44 [details] [associations]
symbol:OTUB1 "Ubiquitin thioesterase OTUB1" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400
Pfam:PF10275 EMBL:AP000721 HGNC:HGNC:23077 ChiTaRS:OTUB1
OMA:VVYLRLI ProteinModelPortal:J3KR44 Ensembl:ENST00000422031
Uniprot:J3KR44
Length = 308
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 127/254 (50%), Positives = 183/254 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 55 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 114
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 115 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 174
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 175 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 233
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 234 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPK 293
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 294 VYLLYRPGHYDILY 307
>UNIPROTKB|Q96FW1 [details] [associations]
symbol:OTUB1 "Ubiquitin thioesterase OTUB1" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0019784
"NEDD8-specific protease activity" evidence=IDA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IDA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:2000780 "negative regulation of double-strand
break repair" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IDA] InterPro:IPR016615
PIRSF:PIRSF013503 GO:GO:0005737 GO:GO:0006281 GO:GO:0006508
GO:GO:0006974 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108
GO:GO:0043130 GO:GO:0008242 GO:GO:0004843 GO:GO:0019784
InterPro:IPR019400 Pfam:PF10275 EMBL:AY177200 EMBL:AF161381
EMBL:AK000120 EMBL:AP000721 EMBL:BC007519 EMBL:BC010368
EMBL:BC107701 IPI:IPI00409750 IPI:IPI00939174 RefSeq:NP_060140.2
UniGene:Hs.473788 PDB:2ZFY PDB:3VON PDB:4DDG PDB:4DDI PDB:4DHZ
PDB:4I6L PDBsum:2ZFY PDBsum:3VON PDBsum:4DDG PDBsum:4DDI
PDBsum:4DHZ PDBsum:4I6L ProteinModelPortal:Q96FW1 SMR:Q96FW1
DIP:DIP-41158N IntAct:Q96FW1 MINT:MINT-5001867 STRING:Q96FW1
MEROPS:C65.001 PhosphoSite:Q96FW1 DMDM:44888286 PaxDb:Q96FW1
PRIDE:Q96FW1 DNASU:55611 Ensembl:ENST00000428192
Ensembl:ENST00000538426 GeneID:55611 KEGG:hsa:55611 UCSC:uc001nyf.1
UCSC:uc001nyg.1 CTD:55611 GeneCards:GC11P063753 HGNC:HGNC:23077
HPA:HPA039176 MIM:608337 neXtProt:NX_Q96FW1 PharmGKB:PA134988141
eggNOG:NOG267426 HOVERGEN:HBG053383 InParanoid:Q96FW1 KO:K09602
OrthoDB:EOG47H5QS PhylomeDB:Q96FW1 ChiTaRS:OTUB1
EvolutionaryTrace:Q96FW1 GenomeRNAi:55611 NextBio:60179
ArrayExpress:Q96FW1 Bgee:Q96FW1 CleanEx:HS_OTUB1
Genevestigator:Q96FW1 GermOnline:ENSG00000167770 GO:GO:2000780
GO:GO:1901315 Uniprot:Q96FW1
Length = 271
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 127/254 (50%), Positives = 183/254 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPK 256
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 257 VYLLYRPGHYDILY 270
>UNIPROTKB|C5H0C6 [details] [associations]
symbol:OTUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0019784 "NEDD8-specific protease
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008242 "omega peptidase activity"
evidence=IEA] InterPro:IPR016615 PIRSF:PIRSF013503
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0008242
GO:GO:0004843 GO:GO:0019784 InterPro:IPR019400 Pfam:PF10275
MEROPS:C65.001 CTD:55611 eggNOG:NOG267426 KO:K09602
GeneTree:ENSGT00390000006979 OMA:VVYLRLI EMBL:CU914709
EMBL:EU310930 RefSeq:NP_001155875.1 UniGene:Ssc.3629 SMR:C5H0C6
Ensembl:ENSSSCT00000014258 GeneID:100302092 KEGG:ssc:100302092
Uniprot:C5H0C6
Length = 271
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 127/254 (50%), Positives = 183/254 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPK 256
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 257 VYLLYRPGHYDILY 270
>MGI|MGI:2147616 [details] [associations]
symbol:Otub1 "OTU domain, ubiquitin aldehyde binding 1"
species:10090 "Mus musculus" [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0019538 "protein metabolic process" evidence=IEA]
[GO:0019784 "NEDD8-specific protease activity" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0043130 "ubiquitin binding" evidence=ISO] [GO:0071108 "protein
K48-linked deubiquitination" evidence=ISO] [GO:1901315 "negative
regulation of histone H2A K63-linked ubiquitination" evidence=ISO]
[GO:2000780 "negative regulation of double-strand break repair"
evidence=ISO] InterPro:IPR016615 PIRSF:PIRSF013503 MGI:MGI:2147616
GO:GO:0005737 GO:GO:0006281 GO:GO:0006508 GO:GO:0006974
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0043130
GO:GO:0008242 GO:GO:0004843 GO:GO:0019784 InterPro:IPR019400
Pfam:PF10275 MEROPS:C65.001 CTD:55611 eggNOG:NOG267426
HOVERGEN:HBG053383 KO:K09602 OrthoDB:EOG47H5QS ChiTaRS:OTUB1
GO:GO:2000780 GO:GO:1901315 EMBL:AK027996 EMBL:AK140070
EMBL:AK145273 EMBL:AK145970 EMBL:BC022575 EMBL:BC054410
IPI:IPI00154004 RefSeq:NP_598911.1 UniGene:Mm.203921
ProteinModelPortal:Q7TQI3 SMR:Q7TQI3 IntAct:Q7TQI3 STRING:Q7TQI3
PhosphoSite:Q7TQI3 REPRODUCTION-2DPAGE:Q7TQI3 PaxDb:Q7TQI3
PRIDE:Q7TQI3 Ensembl:ENSMUST00000025679 GeneID:107260
KEGG:mmu:107260 UCSC:uc008gki.1 GeneTree:ENSGT00390000006979
HOGENOM:HOG000019496 InParanoid:Q7TQI3 OMA:VVYLRLI NextBio:358648
Bgee:Q7TQI3 CleanEx:MM_OTUB1 Genevestigator:Q7TQI3
GermOnline:ENSMUSG00000024767 Uniprot:Q7TQI3
Length = 271
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 127/254 (50%), Positives = 183/254 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHVFPEGSEPK 256
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 257 VYLLYRPGHYDILY 270
>RGD|1311329 [details] [associations]
symbol:Otub1 "OTU domain, ubiquitin aldehyde binding 1"
species:10116 "Rattus norvegicus" [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008242 "omega peptidase activity"
evidence=IEA] [GO:0019784 "NEDD8-specific protease activity"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0043130 "ubiquitin binding" evidence=ISO;ISS]
[GO:0071108 "protein K48-linked deubiquitination" evidence=ISO;ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISO;ISS] [GO:2000780 "negative regulation
of double-strand break repair" evidence=ISO;ISS] InterPro:IPR016615
PIRSF:PIRSF013503 RGD:1311329 GO:GO:0005737 GO:GO:0006281
GO:GO:0006508 GO:GO:0006974 InterPro:IPR003323 PROSITE:PS50802
GO:GO:0071108 GO:GO:0043130 GO:GO:0008242 GO:GO:0004843
GO:GO:0019784 EMBL:CH473953 InterPro:IPR019400 Pfam:PF10275
MEROPS:C65.001 CTD:55611 eggNOG:NOG267426 HOVERGEN:HBG053383
KO:K09602 OrthoDB:EOG47H5QS GO:GO:2000780 GO:GO:1901315
GeneTree:ENSGT00390000006979 HOGENOM:HOG000019496 OMA:VVYLRLI
EMBL:BC166771 IPI:IPI00371462 RefSeq:NP_001099802.1 UniGene:Rn.9218
ProteinModelPortal:B2RYG6 SMR:B2RYG6 STRING:B2RYG6
PhosphoSite:B2RYG6 World-2DPAGE:0004:B2RYG6 PRIDE:B2RYG6
Ensembl:ENSRNOT00000028752 GeneID:293705 KEGG:rno:293705
UCSC:RGD:1311329 NextBio:636821 Genevestigator:B2RYG6
Uniprot:B2RYG6
Length = 271
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 127/254 (50%), Positives = 183/254 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHVFPEGSEPK 256
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 257 VYLLYRPGHYDILY 270
>ZFIN|ZDB-GENE-040718-204 [details] [associations]
symbol:otub1b "OTU domain, ubiquitin aldehyde
binding 1b" species:7955 "Danio rerio" [GO:0019538 "protein
metabolic process" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR016615 PIRSF:PIRSF013503
ZFIN:ZDB-GENE-040718-204 InterPro:IPR003323 PROSITE:PS50802
GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400 Pfam:PF10275
MEROPS:C65.001 eggNOG:NOG267426 HOVERGEN:HBG053383
OrthoDB:EOG47H5QS GeneTree:ENSGT00390000006979 HOGENOM:HOG000019496
EMBL:BX511061 EMBL:BC076301 IPI:IPI00505174 UniGene:Dr.32713
SMR:Q6DGP0 Ensembl:ENSDART00000005853 InParanoid:Q6DGP0
NextBio:20831209 Uniprot:Q6DGP0
Length = 254
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 132/253 (52%), Positives = 181/253 (71%)
Query: 19 EDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQY-IGDEVYKGKVKDLARK 77
E N + D+ I+ Q I++EI+ S LV D++++ VL+ +Y + D +Y+ K++DL +K
Sbjct: 2 EGVNCLAYDEAIMAQQDRIQQEIATSNPLVSDRQELSVLKGEYAMEDTIYQLKIQDLHKK 61
Query: 78 YSNLRRTRPDGNCFFRSFGFALLESLYH----LD-FRLIAEKSKDKLLELGFQKFTLEDF 132
YS++R+TRPDGNCF+R+FGFA LESL L F+ +A KSK L+ GF +FT+EDF
Sbjct: 62 YSSIRKTRPDGNCFYRAFGFAHLESLLEDSKELQRFKAVAAKSKLDLVNQGFTEFTIEDF 121
Query: 133 HDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGN 192
H+ FM+++ L K ++ + L FN++ SDY+VVYLRL+ SG LQ++ F+Q+FIEG
Sbjct: 122 HNTFMDLIELCEKQQSLGEVLSS-FNDQSVSDYIVVYLRLLTSGYLQREHVFFQHFIEGG 180
Query: 193 RTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQI 252
R+V EFC+QEVEPM KESDHIHIIAL+ AL+V V V YMDRG+ H FPE P+I
Sbjct: 181 RSVKEFCQQEVEPMSKESDHIHIIALAQALNVPVLVEYMDRGEGGTVNNHVFPEGSEPRI 240
Query: 253 HLLYRPGHYDILY 265
LLYRPGHYDILY
Sbjct: 241 FLLYRPGHYDILY 253
>UNIPROTKB|Q3T0Y1 [details] [associations]
symbol:OTUB1 "OTU domain, ubiquitin aldehyde binding 1"
species:9913 "Bos taurus" [GO:2000780 "negative regulation of
double-strand break repair" evidence=IEA] [GO:1901315 "negative
regulation of histone H2A K63-linked ubiquitination" evidence=IEA]
[GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0019784
"NEDD8-specific protease activity" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0008242
"omega peptidase activity" evidence=IEA] InterPro:IPR016615
PIRSF:PIRSF013503 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108
GO:GO:0008242 GO:GO:0004843 GO:GO:0019784 InterPro:IPR019400
Pfam:PF10275 MEROPS:C65.001 CTD:55611 eggNOG:NOG267426
HOVERGEN:HBG053383 KO:K09602 OrthoDB:EOG47H5QS
GeneTree:ENSGT00390000006979 HOGENOM:HOG000019496 OMA:VVYLRLI
EMBL:DAAA02063512 EMBL:BC102210 IPI:IPI00717052
RefSeq:NP_001029891.1 UniGene:Bt.48838 SMR:Q3T0Y1
Ensembl:ENSBTAT00000005174 GeneID:540984 KEGG:bta:540984
InParanoid:Q3T0Y1 NextBio:20878946 Uniprot:Q3T0Y1
Length = 271
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 127/254 (50%), Positives = 180/254 (70%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K D L FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEKRTPVADLLAS-FNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQ 251
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHVFPEGSEPK 256
Query: 252 IHLLYRPGHYDILY 265
++LLYRPGHYDILY
Sbjct: 257 VYLLYRPGHYDILY 270
>UNIPROTKB|F1PIA2 [details] [associations]
symbol:OTUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400
Pfam:PF10275 GeneTree:ENSGT00390000006979 OMA:VVYLRLI
EMBL:AAEX03011649 Ensembl:ENSCAFT00000023395 Uniprot:F1PIA2
Length = 271
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 125/250 (50%), Positives = 181/250 (72%)
Query: 22 NQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLARKYSN 80
N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +KYS
Sbjct: 22 NCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSY 81
Query: 81 LRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLEDFHDQ 135
+R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+EDFH+
Sbjct: 82 IRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNT 141
Query: 136 FMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTV 195
FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG RTV
Sbjct: 142 FMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTV 200
Query: 196 FEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLL 255
EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+++LL
Sbjct: 201 KEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLL 260
Query: 256 YRPGHYDILY 265
YRPGHYDILY
Sbjct: 261 YRPGHYDILY 270
>UNIPROTKB|F5GYN4 [details] [associations]
symbol:OTUB1 "Ubiquitin thioesterase OTUB1" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400
Pfam:PF10275 EMBL:AP000721 HGNC:HGNC:23077 ChiTaRS:OTUB1
IPI:IPI01012383 ProteinModelPortal:F5GYN4 SMR:F5GYN4
Ensembl:ENST00000543988 ArrayExpress:F5GYN4 Bgee:F5GYN4
Uniprot:F5GYN4
Length = 241
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 122/241 (50%), Positives = 176/241 (73%)
Query: 31 LQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLARKYSNLRRTRPDGN 89
+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +KYS +R+TRPDGN
Sbjct: 1 MAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKKYSYIRKTRPDGN 60
Query: 90 CFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLIS 144
CF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+EDFH+ FM+++ +
Sbjct: 61 CFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVE 120
Query: 145 KPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVE 204
K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG RTV EFC+QEVE
Sbjct: 121 K-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVE 179
Query: 205 PMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDIL 264
PM KESDHIHIIAL+ AL V ++V YMDRG+ H FPE P+++LLYRPGHYDIL
Sbjct: 180 PMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDIL 239
Query: 265 Y 265
Y
Sbjct: 240 Y 240
>UNIPROTKB|F5H6Q1 [details] [associations]
symbol:OTUB1 "Ubiquitin thioesterase OTUB1" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400
Pfam:PF10275 EMBL:AP000721 HGNC:HGNC:23077 ChiTaRS:OTUB1
IPI:IPI00000581 ProteinModelPortal:F5H6Q1 SMR:F5H6Q1 PRIDE:F5H6Q1
Ensembl:ENST00000543004 ArrayExpress:F5H6Q1 Bgee:F5H6Q1
Uniprot:F5H6Q1
Length = 280
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 127/263 (48%), Positives = 185/263 (70%)
Query: 18 SEDANQVNQDDLILQQSKNIEKE-ISDSIML--------VGDKEDIMVLEQQYIGDE-VY 67
SE N + D+ I+ Q I++E ++D +L V ++ ++ VL ++Y D+ +Y
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEDMTDPCLLQIAVQNPLVSERLELSVLYKEYAEDDNIY 77
Query: 68 KGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLEL 122
+ K+KDL +KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+
Sbjct: 78 QQKIKDLHKKYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQ 137
Query: 123 GFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDA 182
GF +FT+EDFH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++
Sbjct: 138 GFTEFTIEDFHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRES 196
Query: 183 DFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDSTEAIAH 242
F+++FIEG RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++V YMDRG+ H
Sbjct: 197 KFFEHFIEGGRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDRGEGGTTNPH 256
Query: 243 DFPEDKPPQIHLLYRPGHYDILY 265
FPE P+++LLYRPGHYDILY
Sbjct: 257 IFPEGSEPKVYLLYRPGHYDILY 279
>UNIPROTKB|F5GYJ8 [details] [associations]
symbol:OTUB1 "Ubiquitin thioesterase OTUB1" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0008242 GO:GO:0019538 InterPro:IPR019400
Pfam:PF10275 EMBL:AP000721 HGNC:HGNC:23077 ChiTaRS:OTUB1
IPI:IPI01014215 ProteinModelPortal:F5GYJ8 SMR:F5GYJ8
Ensembl:ENST00000535715 ArrayExpress:F5GYJ8 Bgee:F5GYJ8
Uniprot:F5GYJ8
Length = 286
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 104/216 (48%), Positives = 156/216 (72%)
Query: 18 SEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYIGDE-VYKGKVKDLAR 76
SE N + D+ I+ Q I++EI+ LV ++ ++ VL ++Y D+ +Y+ K+KDL +
Sbjct: 18 SEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK 77
Query: 77 KYSNLRRTRPDGNCFFRSFGFALLESLY----HLD-FRLIAEKSKDKLLELGFQKFTLED 131
KYS +R+TRPDGNCF+R+FGF+ LE+L L F+ ++ KSK+ L+ GF +FT+ED
Sbjct: 78 KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIED 137
Query: 132 FHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG 191
FH+ FM+++ + K +T+ L+ FN++ SDY+VVYLRL+ SG LQ+++ F+++FIEG
Sbjct: 138 FHNTFMDLIEQVEK-QTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEG 196
Query: 192 NRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVR 227
RTV EFC+QEVEPM KESDHIHIIAL+ AL V ++
Sbjct: 197 GRTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQ 232
>TAIR|locus:2010469 [details] [associations]
symbol:AT1G28120 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] InterPro:IPR016615 PIRSF:PIRSF013503 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006520 GO:GO:0008234 GO:GO:0006508
EMBL:AC069471 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0008242
InterPro:IPR019400 Pfam:PF10275 MEROPS:C65.001 eggNOG:NOG267426
KO:K09602 HOGENOM:HOG000019496 OMA:VVYLRLI EMBL:AY136373
EMBL:BT000164 EMBL:AY084389 IPI:IPI00531741 PIR:A86407
RefSeq:NP_564299.1 UniGene:At.43774 ProteinModelPortal:Q8LG98
SMR:Q8LG98 IntAct:Q8LG98 PaxDb:Q8LG98 PRIDE:Q8LG98
EnsemblPlants:AT1G28120.1 GeneID:839705 KEGG:ath:AT1G28120
TAIR:At1g28120 InParanoid:Q8LG98 PhylomeDB:Q8LG98
ProtClustDB:CLSN2688044 Genevestigator:Q8LG98 GermOnline:AT1G28120
Uniprot:Q8LG98
Length = 306
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 107/263 (40%), Positives = 149/263 (56%)
Query: 31 LQQSKNIEKEISDSIMLVGDKEDIMVLEQQY-IGDEVYKGKVKDLARKYSNLRRTRPDGN 89
++ + ++E + + VGDKE + L +Y G + K+K L +Y +RRTR DGN
Sbjct: 32 VEDQPSFQEEEAAKVPYVGDKEPLSSLAAEYQSGSPILLEKIKILDSQYIGIRRTRGDGN 91
Query: 90 CFFRSFGFALLESLYH------LD-FRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNL 142
CFFRSF F+ LE + +D ++ EK + L LG+ FT EDF F+E ++
Sbjct: 92 CFFRSFMFSYLEHILESQDRAEVDRIKVNVEKCRKTLQNLGYTDFTFEDFFALFLEQLDD 151
Query: 143 I---SKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQLQQDADFYQNFIEG--NRTVFE 197
I ++ + D LV ++ SDY+V++ R + +G ++ ADF++ FI G N TV +
Sbjct: 152 ILQGTEESISYDELVNRSRDQSVSDYIVMFFRFVTAGDIRTRADFFEPFITGLSNATVDQ 211
Query: 198 FCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRG--DSTEAIA--HDF-P------- 245
FC+ VEPM +ESDHIHI ALS AL V +RV Y+DR DS HDF P
Sbjct: 212 FCKSSVEPMGEESDHIHITALSDALGVAIRVVYLDRSSCDSGGVTVNHHDFVPVGITNEK 271
Query: 246 --EDKPPQIHLLYRPGHYDILYP 266
E P I LLYRPGHYDILYP
Sbjct: 272 DEEASAPFITLLYRPGHYDILYP 294
>UNIPROTKB|F1MZJ2 [details] [associations]
symbol:OTUB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0006520 "cellular amino acid metabolic process"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 GO:GO:0006520
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0070536
GO:GO:0008242 GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275
GeneTree:ENSGT00390000006979 OMA:ATECDHV EMBL:DAAA02053048
IPI:IPI00693685 UniGene:Bt.27676 Ensembl:ENSBTAT00000019943
Uniprot:F1MZJ2
Length = 234
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 85/227 (37%), Positives = 146/227 (64%)
Query: 44 SIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESL 103
S L+ +K DI+ + + + + +Y+ K+++L+++++ +R+T+ DGNCF+R+ G++ LESL
Sbjct: 5 SFNLISEKCDILSILRDHPENRIYQRKIQELSKRFTAIRKTKGDGNCFYRALGYSYLESL 64
Query: 104 YH-----LDFRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFN 158
L F+ ++ + LL GF++ T +F + F VV L+ K + + +L++VFN
Sbjct: 65 LGKSREILKFKERVLQTPNDLLVAGFEEHTFRNFFNAFYSVVELVEK-DGSVSSLLKVFN 123
Query: 159 NKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIAL 218
++ +SD +V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DHI I AL
Sbjct: 124 DQSFSDRIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCAHEVEPMAMECDHIQITAL 183
Query: 219 STALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
S AL++ ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 184 SQALNIALQVEYVDEMD-TALNHHVFPEAATPSVYLLYKTSHYNILY 229
>RGD|1306688 [details] [associations]
symbol:Otub2 "OTU domain, ubiquitin aldehyde binding 2"
species:10116 "Rattus norvegicus" [GO:0004843 "ubiquitin-specific
protease activity" evidence=IEA;ISO] [GO:0006520 "cellular amino
acid metabolic process" evidence=IEA;ISO] [GO:0008242 "omega
peptidase activity" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] [GO:0070536 "protein K63-linked
deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein K48-linked
deubiquitination" evidence=IEA;ISO] InterPro:IPR016615
PIRSF:PIRSF013503 RGD:1306688 GO:GO:0006520 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0071108 GO:GO:0070536 GO:GO:0008242
GO:GO:0004843 EMBL:CH473982 InterPro:IPR019400 Pfam:PF10275
GeneTree:ENSGT00390000006979 MEROPS:C65.002 CTD:78990 KO:K09603
OrthoDB:EOG4NP74N IPI:IPI00958691 RefSeq:NP_001101523.1
UniGene:Rn.18862 Ensembl:ENSRNOT00000012124 GeneID:314405
KEGG:rno:314405 UCSC:RGD:1306688 NextBio:667620 Uniprot:D3ZAR8
Length = 234
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 83/227 (36%), Positives = 146/227 (64%)
Query: 44 SIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESL 103
S L+ +K DI+ + + + + +Y+ K+++L+++++++R+T+ DGNCF+R+ G++ LESL
Sbjct: 5 SFNLISEKCDILSILRDHPENRIYQRKIQELSKRFTSIRKTKGDGNCFYRALGYSYLESL 64
Query: 104 YH-----LDFRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFN 158
L F+ ++ + LL GF++ +F + F VV L+ K +++ +L++VFN
Sbjct: 65 LGKGREILKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEK-DSSVSSLLKVFN 123
Query: 159 NKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIAL 218
++ SD +V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DH+ I AL
Sbjct: 124 DQSSSDRIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCTHEVEPMAMECDHVQITAL 183
Query: 219 STALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
S AL++ ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 184 SQALNIALQVEYVDEMD-TALNHHVFPEAATPSVYLLYKTSHYNILY 229
>UNIPROTKB|F1PKV7 [details] [associations]
symbol:OTUB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0006520 "cellular amino acid metabolic process"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 GO:GO:0006520
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0070536
GO:GO:0008242 GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275
GeneTree:ENSGT00390000006979 OMA:ATECDHV EMBL:AAEX03005950
Ensembl:ENSCAFT00000027936 Uniprot:F1PKV7
Length = 234
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 84/227 (37%), Positives = 144/227 (63%)
Query: 44 SIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESL 103
S L+ +K DI+ + + + + +Y+ K+++L+++++ +R+T+ DGNCF+R+ G++ LESL
Sbjct: 5 SFNLISEKCDILSILRDHPENRIYQRKIQELSKRFTGIRKTKGDGNCFYRALGYSYLESL 64
Query: 104 YH-----LDFRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFN 158
L F+ ++ + LL GF++ +F + F VV L+ K + + +L++VFN
Sbjct: 65 LGKSREVLKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEK-DGSVSSLLKVFN 123
Query: 159 NKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIAL 218
++ SD +V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DHI I AL
Sbjct: 124 DQSSSDQIVQFLRLLTSAFIKNRADFFRHFIDEEMDIKDFCTHEVEPMAMECDHIQITAL 183
Query: 219 STALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
S AL++ ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 184 SQALNIALQVEYVDEMD-TALNHHVFPEAATPSVYLLYKTSHYNILY 229
>MGI|MGI:1915399 [details] [associations]
symbol:Otub2 "OTU domain, ubiquitin aldehyde binding 2"
species:10090 "Mus musculus" [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006520
"cellular amino acid metabolic process" evidence=ISO] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
peptidase activity" evidence=IEA] [GO:0008242 "omega peptidase
activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019538 "protein metabolic process" evidence=IEA] [GO:0070536
"protein K63-linked deubiquitination" evidence=ISO] [GO:0071108
"protein K48-linked deubiquitination" evidence=ISO]
InterPro:IPR016615 PIRSF:PIRSF013503 MGI:MGI:1915399 GO:GO:0006520
GO:GO:0006508 InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108
GO:GO:0070536 GO:GO:0008242 GO:GO:0004843 InterPro:IPR019400
Pfam:PF10275 eggNOG:NOG267426 HOVERGEN:HBG053383
GeneTree:ENSGT00390000006979 HOGENOM:HOG000019496 MEROPS:C65.002
CTD:78990 KO:K09603 OrthoDB:EOG4NP74N EMBL:AK006054 EMBL:AK006346
EMBL:AK006469 EMBL:AK019830 EMBL:AK160505 EMBL:BC049551
IPI:IPI00315791 RefSeq:NP_001171312.1 RefSeq:NP_080856.1
UniGene:Mm.127378 ProteinModelPortal:Q9CQX0 SMR:Q9CQX0
STRING:Q9CQX0 PhosphoSite:Q9CQX0 PaxDb:Q9CQX0 PRIDE:Q9CQX0
DNASU:68149 Ensembl:ENSMUST00000021620 GeneID:68149 KEGG:mmu:68149
UCSC:uc007ovg.2 NextBio:326534 Bgee:Q9CQX0 CleanEx:MM_OTUB2
Genevestigator:Q9CQX0 GermOnline:ENSMUSG00000021203 Uniprot:Q9CQX0
Length = 234
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 83/227 (36%), Positives = 146/227 (64%)
Query: 44 SIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESL 103
S L+ +K DI+ + + + + +Y+ K+++L+++++++R+T+ DGNCF+R+ G++ LESL
Sbjct: 5 SFNLISEKCDILSILRDHPENRIYQRKIQELSKRFTSIRKTKGDGNCFYRALGYSYLESL 64
Query: 104 YH-----LDFRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFN 158
L F+ ++ + LL GF++ +F + F VV L+ K +++ +L++VFN
Sbjct: 65 LGKSREILKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEK-DSSVSSLLKVFN 123
Query: 159 NKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIAL 218
++ SD +V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DH+ I AL
Sbjct: 124 DQSSSDRIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCTHEVEPMAMECDHVQITAL 183
Query: 219 STALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
S AL++ ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 184 SQALNIALQVEYVDEMD-TALNHHVFPEAAIPSVYLLYKTSHYNILY 229
>UNIPROTKB|Q96DC9 [details] [associations]
symbol:OTUB2 "Ubiquitin thioesterase OTUB2" species:9606
"Homo sapiens" [GO:0008242 "omega peptidase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006520 "cellular amino
acid metabolic process" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016579 "protein
deubiquitination" evidence=IMP] [GO:0004843 "ubiquitin-specific
protease activity" evidence=IDA;IMP] [GO:0070536 "protein
K63-linked deubiquitination" evidence=IDA] [GO:0071108 "protein
K48-linked deubiquitination" evidence=IDA] InterPro:IPR016615
PIRSF:PIRSF013503 GO:GO:0006520 GO:GO:0006508 InterPro:IPR003323
PROSITE:PS50802 GO:GO:0071108 GO:GO:0070536 EMBL:AL079302
GO:GO:0008242 GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275
eggNOG:NOG267426 HOVERGEN:HBG053383 HOGENOM:HOG000019496
EMBL:AY177201 EMBL:AK025569 EMBL:CR457345 EMBL:BC009615
EMBL:BC068058 IPI:IPI00302895 IPI:IPI00401454 RefSeq:NP_075601.1
UniGene:Hs.278815 PDB:1TFF PDBsum:1TFF ProteinModelPortal:Q96DC9
SMR:Q96DC9 IntAct:Q96DC9 STRING:Q96DC9 MEROPS:C65.002
PhosphoSite:Q96DC9 DMDM:44888285 PaxDb:Q96DC9 PeptideAtlas:Q96DC9
PRIDE:Q96DC9 DNASU:78990 Ensembl:ENST00000203664
Ensembl:ENST00000553723 GeneID:78990 KEGG:hsa:78990 UCSC:uc001ych.3
UCSC:uc001yci.3 CTD:78990 GeneCards:GC14P094492 HGNC:HGNC:20351
HPA:HPA002329 MIM:608338 neXtProt:NX_Q96DC9 PharmGKB:PA134861658
InParanoid:Q96DC9 KO:K09603 OMA:ATECDHV OrthoDB:EOG4NP74N
PhylomeDB:Q96DC9 ChiTaRS:OTUB2 EvolutionaryTrace:Q96DC9
GenomeRNAi:78990 NextBio:67574 Bgee:Q96DC9 CleanEx:HS_OTUB2
Genevestigator:Q96DC9 GermOnline:ENSG00000089723 Uniprot:Q96DC9
Length = 234
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 83/227 (36%), Positives = 142/227 (62%)
Query: 44 SIMLVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESL 103
S L+ +K DI+ + + + + +Y+ K+++L+++++ +R+T+ DGNCF+R+ G++ LESL
Sbjct: 5 SFNLISEKCDILSILRDHPENRIYRRKIEELSKRFTAIRKTKGDGNCFYRALGYSYLESL 64
Query: 104 YHLDFRLIAEKSK-----DKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFN 158
+ K + + LL GF++ +F + F VV L+ K + + +L++VFN
Sbjct: 65 LGKSREIFKFKERVLQTPNDLLAAGFEEHKFRNFFNAFYSVVELVEK-DGSVSSLLKVFN 123
Query: 159 NKDYSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIAL 218
++ SD++V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DHI I AL
Sbjct: 124 DQSASDHIVQFLRLLTSAFIRNRADFFRHFIDEEMDIKDFCTHEVEPMATECDHIQITAL 183
Query: 219 STALDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
S AL + ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 184 SQALSIALQVEYVDEMD-TALNHHVFPEAATPSVYLLYKTSHYNILY 229
>UNIPROTKB|F1SCG8 [details] [associations]
symbol:OTUB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071108 "protein K48-linked deubiquitination"
evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
evidence=IEA] [GO:0006520 "cellular amino acid metabolic process"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0008242 "omega peptidase activity" evidence=IEA]
InterPro:IPR016615 PIRSF:PIRSF013503 GO:GO:0006520
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0070536
GO:GO:0008242 GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275
GeneTree:ENSGT00390000006979 KO:K09603 OMA:ATECDHV EMBL:CT990641
RefSeq:XP_001925403.1 UniGene:Ssc.6499 Ensembl:ENSSSCT00000002741
GeneID:100151873 KEGG:ssc:100151873 Uniprot:F1SCG8
Length = 234
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 83/224 (37%), Positives = 144/224 (64%)
Query: 47 LVGDKEDIMVLEQQYIGDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYH- 105
L+ +K DI+ + + + + +Y+ K+++L+++++ +R+T+ DGNCF+R+ G++ LESL
Sbjct: 8 LISEKCDILSILRDHPENRIYQRKIQELSKRFTAIRKTKGDGNCFYRALGYSYLESLLGK 67
Query: 106 ----LDFRLIAEKSKDKLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKD 161
L F+ ++ + LL GF++ ++F + F VV L+ K + + +L++VFN++
Sbjct: 68 SREILKFKERVLQTPNDLLAAGFEEHKFQNFFNAFYSVVELVEK-DGSVSSLLKVFNDQS 126
Query: 162 YSDYVVVYLRLIASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTA 221
SD +V +LRL+ S ++ ADF+++FI+ + +FC EVEPM E DHI I ALS A
Sbjct: 127 SSDRIVQFLRLLTSAFIRNRADFFRHFIDEEMDIRDFCTHEVEPMAMECDHIQITALSQA 186
Query: 222 LDVGVRVRYMDRGDSTEAIAHDFPEDKPPQIHLLYRPGHYDILY 265
L++ ++V Y+D D T H FPE P ++LLY+ HY+ILY
Sbjct: 187 LNIALQVEYVDEMD-TALNHHVFPEAAIPSVYLLYKTSHYNILY 229
>WB|WBGene00007718 [details] [associations]
symbol:otub-1 species:6239 "Caenorhabditis elegans"
[GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0019538
"protein metabolic process" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IDA] [GO:0071108
"protein K48-linked deubiquitination" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR016615
PIRSF:PIRSF013503 GO:GO:0005886 GO:GO:0006520 GO:GO:0006508
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0008242
GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275 eggNOG:COG5539
PDB:4DHZ PDBsum:4DHZ KO:K09602 GeneTree:ENSGT00390000006979
HOGENOM:HOG000019496 OMA:VVYLRLI EMBL:Z81039 PIR:T19448
RefSeq:NP_506709.1 PDB:4DHI PDB:4DHJ PDBsum:4DHI PDBsum:4DHJ
ProteinModelPortal:Q9XVR6 SMR:Q9XVR6 DIP:DIP-26135N IntAct:Q9XVR6
MINT:MINT-1069399 STRING:Q9XVR6 MEROPS:C65.A01 PaxDb:Q9XVR6
EnsemblMetazoa:C25D7.8.1 EnsemblMetazoa:C25D7.8.2 GeneID:3565820
KEGG:cel:CELE_C25D7.8 UCSC:C25D7.8 CTD:3565820 WormBase:C25D7.8
InParanoid:Q9XVR6 NextBio:957977 Uniprot:Q9XVR6
Length = 284
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/272 (36%), Positives = 148/272 (54%)
Query: 7 EPDQASFDKGYSEDANQVNQDDLILQ--QSKNIEKEISDSIMLVGDKEDIMVLEQQYIGD 64
EP Q S D G + +A V D+++LQ Q K IE E S+ LV +L +Y +
Sbjct: 4 EP-QKSDDNGQAAEA-VVTDDEIVLQDQQLKTIEDE-QKSVPLVATLAPFSILCAEYDNE 60
Query: 65 E--VYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLDFRL--IAEKSKD--- 117
+ K +L+ Y +R R DGNCF+R+ L+E + RL S+D
Sbjct: 61 TSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDWTR 120
Query: 118 KLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQ 177
L+ELGF +T DF D F+E + I E+ + + N+ ++Y++++ RLI S
Sbjct: 121 TLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVYTILNDDGSANYILMFFRLITSAF 180
Query: 178 LQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDST 237
L+Q+++ Y FI+ TV ++C QE+EPM+K++DH+ I +L A VR+ YMDR +
Sbjct: 181 LKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAP 240
Query: 238 EAIAH-DFPEDKP---PQIHLLYRPGHYDILY 265
H D P D P+I LLYRPGHYD++Y
Sbjct: 241 NGGWHYDIPSDDQQIAPEITLLYRPGHYDVIY 272
>UNIPROTKB|Q9XVR6 [details] [associations]
symbol:otub-1 "Ubiquitin thioesterase otubain-like"
species:6239 "Caenorhabditis elegans" [GO:0006520 "cellular amino
acid metabolic process" evidence=ISS] InterPro:IPR016615
PIRSF:PIRSF013503 GO:GO:0005886 GO:GO:0006520 GO:GO:0006508
InterPro:IPR003323 PROSITE:PS50802 GO:GO:0071108 GO:GO:0008242
GO:GO:0004843 InterPro:IPR019400 Pfam:PF10275 eggNOG:COG5539
PDB:4DHZ PDBsum:4DHZ KO:K09602 GeneTree:ENSGT00390000006979
HOGENOM:HOG000019496 OMA:VVYLRLI EMBL:Z81039 PIR:T19448
RefSeq:NP_506709.1 PDB:4DHI PDB:4DHJ PDBsum:4DHI PDBsum:4DHJ
ProteinModelPortal:Q9XVR6 SMR:Q9XVR6 DIP:DIP-26135N IntAct:Q9XVR6
MINT:MINT-1069399 STRING:Q9XVR6 MEROPS:C65.A01 PaxDb:Q9XVR6
EnsemblMetazoa:C25D7.8.1 EnsemblMetazoa:C25D7.8.2 GeneID:3565820
KEGG:cel:CELE_C25D7.8 UCSC:C25D7.8 CTD:3565820 WormBase:C25D7.8
InParanoid:Q9XVR6 NextBio:957977 Uniprot:Q9XVR6
Length = 284
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 98/272 (36%), Positives = 148/272 (54%)
Query: 7 EPDQASFDKGYSEDANQVNQDDLILQ--QSKNIEKEISDSIMLVGDKEDIMVLEQQYIGD 64
EP Q S D G + +A V D+++LQ Q K IE E S+ LV +L +Y +
Sbjct: 4 EP-QKSDDNGQAAEA-VVTDDEIVLQDQQLKTIEDE-QKSVPLVATLAPFSILCAEYDNE 60
Query: 65 E--VYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLDFRL--IAEKSKD--- 117
+ K +L+ Y +R R DGNCF+R+ L+E + RL S+D
Sbjct: 61 TSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDWTR 120
Query: 118 KLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQ 177
L+ELGF +T DF D F+E + I E+ + + N+ ++Y++++ RLI S
Sbjct: 121 TLVELGFPDWTCTDFCDFFIEFLEKIHSGVHTEEAVYTILNDDGSANYILMFFRLITSAF 180
Query: 178 LQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYMDRGDST 237
L+Q+++ Y FI+ TV ++C QE+EPM+K++DH+ I +L A VR+ YMDR +
Sbjct: 181 LKQNSEEYAPFIDEGMTVAQYCEQEIEPMWKDADHLAINSLIKAAGTRVRIEYMDRTAAP 240
Query: 238 EAIAH-DFPEDKP---PQIHLLYRPGHYDILY 265
H D P D P+I LLYRPGHYD++Y
Sbjct: 241 NGGWHYDIPSDDQQIAPEITLLYRPGHYDVIY 272
>ASPGD|ASPL0000072605 [details] [associations]
symbol:AN4784 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001303 InterPro:IPR003323 PROSITE:PS50802
InterPro:IPR019400 Pfam:PF10275 EnsemblFungi:CADANIAT00005638
HOGENOM:HOG000194334 OMA:YANADPT Uniprot:C8VAN4
Length = 509
Score = 231 (86.4 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 63/219 (28%), Positives = 109/219 (49%)
Query: 64 DEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHL-D-FRLIAEKSKDKLL- 120
D + K LA + R + DGNC +R+ F E+L+ L D +L E+++ K L
Sbjct: 99 DPTFATKTSALAVTHPQSRIMKGDGNCGWRAVAFGYFENLFSLRDPVQLQRERARFKSLN 158
Query: 121 ----ELGFQKFTLEDFHDQ----FMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRL 172
++G + T F D F ++N I + E ++ LV +FN++ S+ ++ + R
Sbjct: 159 TLLDQVGLDEITYGMFADATDEVFDSILNAIERGERDDSFLVALFNDEYNSNTILCHFRF 218
Query: 173 IASGQLQQDADFYQNFIEGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVG----VRV 228
+ S ++ +A Y F+ + + +C +++P+ E D I + AL + G V +
Sbjct: 219 LTSAWIKLNAHRYSAFLPMDMPIDRYCSTQIDPVKTEIDGIGLQALVDGVIEGSGLVVEI 278
Query: 229 RYMDRGDSTEAIAHDFPEDKPP--QIHLLYRPGHYDILY 265
Y+DR + H + +P I LLYRPGHYD+LY
Sbjct: 279 LYLDRSEGDAVTPHVLTQTRPGVGAIRLLYRPGHYDLLY 317
>GENEDB_PFALCIPARUM|PF11_0428 [details] [associations]
symbol:PF11_0428 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF02338 InterPro:IPR003323 PROSITE:PS50802 EMBL:AE014186
RefSeq:XP_001348098.1 ProteinModelPortal:Q8IHU8
EnsemblProtists:PF11_0428:mRNA GeneID:810974 KEGG:pfa:PF11_0428
EuPathDB:PlasmoDB:PF3D7_1141700 HOGENOM:HOG000282507
ProtClustDB:CLSZ2446662 Uniprot:Q8IHU8
Length = 313
Score = 111 (44.1 bits), Expect = 0.00072, P = 0.00072
Identities = 67/278 (24%), Positives = 113/278 (40%)
Query: 5 NIEPDQASFDKGYSEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYI-- 62
N E D ++ Y+ D N N+DD + +S + K + E++ I
Sbjct: 55 NKEDDNKKVEENYNNDDN--NKDDPFHTNTLYQMNVMSKKALRNRKKMEHREYEEEQIEK 112
Query: 63 -----GDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLDFRLIAEKSKD 117
G++ Y+ +L + + PDGNC + S L ++ + + D
Sbjct: 113 SRNKEGEKEYEELSLNLKKLNKTIYSIAPDGNCLYESIIHQLKYRIHTYQYTIT-----D 167
Query: 118 KLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQ 177
L + ++F+L++ +NL TN +FNN + +D LR I S
Sbjct: 168 FLKLINKEQFSLDN--------INLKDYINTNFFNF-NIFNNINPNDLSSDLLRFITSIY 218
Query: 178 LQQDADFYQNFI------EGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYM 231
L Q+ + + NFI E N T F++C ++ ++ I I ALS L + V +
Sbjct: 219 LLQNKELFINFIYDSDDCEDNDTYFKYCEDIIKGVY--GSEIEIKALSNILKKKITVYDV 276
Query: 232 DRGDSTEAIAHDFPEDKPPQIH-LLYRPG-HYDILYPL 267
+ S E D E+ H LY G HY+ + L
Sbjct: 277 NMNISYE---EDCEEELFLCFHHKLYALGKHYNSVIDL 311
>UNIPROTKB|Q8IHU8 [details] [associations]
symbol:PF11_0428 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF02338 InterPro:IPR003323 PROSITE:PS50802 EMBL:AE014186
RefSeq:XP_001348098.1 ProteinModelPortal:Q8IHU8
EnsemblProtists:PF11_0428:mRNA GeneID:810974 KEGG:pfa:PF11_0428
EuPathDB:PlasmoDB:PF3D7_1141700 HOGENOM:HOG000282507
ProtClustDB:CLSZ2446662 Uniprot:Q8IHU8
Length = 313
Score = 111 (44.1 bits), Expect = 0.00072, P = 0.00072
Identities = 67/278 (24%), Positives = 113/278 (40%)
Query: 5 NIEPDQASFDKGYSEDANQVNQDDLILQQSKNIEKEISDSIMLVGDKEDIMVLEQQYI-- 62
N E D ++ Y+ D N N+DD + +S + K + E++ I
Sbjct: 55 NKEDDNKKVEENYNNDDN--NKDDPFHTNTLYQMNVMSKKALRNRKKMEHREYEEEQIEK 112
Query: 63 -----GDEVYKGKVKDLARKYSNLRRTRPDGNCFFRSFGFALLESLYHLDFRLIAEKSKD 117
G++ Y+ +L + + PDGNC + S L ++ + + D
Sbjct: 113 SRNKEGEKEYEELSLNLKKLNKTIYSIAPDGNCLYESIIHQLKYRIHTYQYTIT-----D 167
Query: 118 KLLELGFQKFTLEDFHDQFMEVVNLISKPETNEDTLVEVFNNKDYSDYVVVYLRLIASGQ 177
L + ++F+L++ +NL TN +FNN + +D LR I S
Sbjct: 168 FLKLINKEQFSLDN--------INLKDYINTNFFNF-NIFNNINPNDLSSDLLRFITSIY 218
Query: 178 LQQDADFYQNFI------EGNRTVFEFCRQEVEPMFKESDHIHIIALSTALDVGVRVRYM 231
L Q+ + + NFI E N T F++C ++ ++ I I ALS L + V +
Sbjct: 219 LLQNKELFINFIYDSDDCEDNDTYFKYCEDIIKGVY--GSEIEIKALSNILKKKITVYDV 276
Query: 232 DRGDSTEAIAHDFPEDKPPQIH-LLYRPG-HYDILYPL 267
+ S E D E+ H LY G HY+ + L
Sbjct: 277 NMNISYE---EDCEEELFLCFHHKLYALGKHYNSVIDL 311
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.139 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 267 0.00095 114 3 11 22 0.48 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 583 (62 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.33u 0.07s 27.40t Elapsed: 00:00:10
Total cpu time: 27.34u 0.07s 27.41t Elapsed: 00:00:10
Start: Thu Aug 15 14:48:30 2013 End: Thu Aug 15 14:48:40 2013