Your job contains 1 sequence.
>psy12905
PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKV
CYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLE
KLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYR
ESVNLAQVRTFVEMDSHEEKVYQAVRKREAENKMREKAKELKRQRMESAKKFPKMGSGVG
VGSNPYFGSSSYSSSPVTPVLESADISIRSSYIAQTVQREKKFRDIRIGRKSLENESYPL
RIKIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPT
TNISNMDSYSIFLFTLVMQVPKPRSFRFENTLKTPFATSVNYHVNFSHLNKLLSIMFLLH
RIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLII
SVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELFKSKTEI
GLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVNIEYELEHEEKE
LNQVTISIPLP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12905
(611 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028969 - symbol:deltaCOP "delta-coatomer protein"... 691 7.3e-129 3
MGI|MGI:2387591 - symbol:Arcn1 "archain 1" species:10090 ... 662 7.3e-121 3
RGD|1359110 - symbol:Arcn1 "archain 1" species:10116 "Rat... 662 7.3e-121 3
UNIPROTKB|I3LBY0 - symbol:ARCN1 "Uncharacterized protein"... 663 9.3e-121 3
UNIPROTKB|F1PRT4 - symbol:ARCN1 "Uncharacterized protein"... 662 9.3e-121 3
ZFIN|ZDB-GENE-021031-2 - symbol:arcn1a "archain 1a" speci... 652 1.3e-117 3
UNIPROTKB|B0YIW6 - symbol:ARCN1 "Archain 1, isoform CRA_a... 665 2.1e-111 2
UNIPROTKB|P48444 - symbol:ARCN1 "Coatomer subunit delta" ... 664 2.7e-111 2
UNIPROTKB|P53619 - symbol:ARCN1 "Coatomer subunit delta" ... 666 4.3e-111 2
UNIPROTKB|Q5ZL57 - symbol:ARCN1 "Coatomer subunit delta" ... 667 1.9e-110 2
ZFIN|ZDB-GENE-040121-7 - symbol:arcn1b "archain 1b" speci... 663 2.7e-109 2
WB|WBGene00015734 - symbol:C13B9.3 species:6239 "Caenorha... 533 1.2e-87 3
UNIPROTKB|P49661 - symbol:LOC_Os01g61710 "Coatomer subuni... 477 3.5e-80 3
TAIR|locus:2175269 - symbol:AT5G05010 species:3702 "Arabi... 482 5.5e-76 3
UNIPROTKB|G4MP14 - symbol:MGG_05676 "Coatomer subunit del... 473 4.2e-72 3
DICTYBASE|DDB_G0268702 - symbol:copD "coatomer protein co... 490 1.8e-68 2
ASPGD|ASPL0000062974 - symbol:AN0922 species:162425 "Emer... 463 4.2e-67 2
CGD|CAL0000185 - symbol:RET2 species:5476 "Candida albica... 444 3.8e-60 2
UNIPROTKB|Q5AGE3 - symbol:RET2 "Putative uncharacterized ... 444 3.8e-60 2
SGD|S000001947 - symbol:RET2 "Delta subunit of the coatom... 344 5.0e-45 2
GENEDB_PFALCIPARUM|PF11_0359 - symbol:PF11_0359 "coatomer... 334 1.0e-40 2
UNIPROTKB|Q8II16 - symbol:PF11_0359 "Coatomer delta subun... 334 1.0e-40 2
POMBASE|SPCC285.08 - symbol:ret2 "coatomer delta subunit ... 419 2.9e-39 1
UNIPROTKB|E9PK34 - symbol:ARCN1 "Coatomer subunit delta" ... 195 1.6e-14 1
ASPGD|ASPL0000077433 - symbol:AN8795 species:162425 "Emer... 124 0.00019 1
WB|WBGene00000150 - symbol:apm-1 species:6239 "Caenorhabd... 118 0.00080 1
>FB|FBgn0028969 [details] [associations]
symbol:deltaCOP "delta-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0009306
"protein secretion" evidence=IMP] [GO:0007436 "larval salivary
gland morphogenesis" evidence=IMP] [GO:0035158 "regulation of tube
diameter, open tracheal system" evidence=IMP] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0006886 GO:GO:0006911 EMBL:AE014298 GO:GO:0009306
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0010883 GO:GO:0035158 GO:GO:0007436
PANTHER:PTHR10121 GeneTree:ENSGT00390000017207 OMA:NNDVGVL
UniGene:Dm.6542 GeneID:45250 KEGG:dme:Dmel_CG14813 CTD:45250
FlyBase:FBgn0028969 GenomeRNAi:45250 NextBio:837953 EMBL:AY051528
RefSeq:NP_652012.1 SMR:Q9W555 IntAct:Q9W555 MINT:MINT-1564210
STRING:Q9W555 EnsemblMetazoa:FBtr0070371 UCSC:CG14813-RA
InParanoid:Q9W555 Uniprot:Q9W555
Length = 532
Score = 691 (248.3 bits), Expect = 7.3e-129, Sum P(3) = 7.3e-129
Identities = 140/191 (73%), Positives = 163/191 (85%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G I+SRQFVEMT+ARIEGLLAAFPKLM++GKQHT+VETDSVRYVYQP+
Sbjct: 2 VLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYMLLITTK SNILEDLETLRLFS+VIPEY +LDE E+ +NAF+LIFAFDEIVALGY
Sbjct: 62 EKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKF-PKM 235
RESVNLAQ++TFVEMDSHEEKVYQAVR+ R+A KMREKAKEL+RQRME++K+ P +
Sbjct: 122 RESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASKRGGPSL 181
Query: 236 GSGVGVGSNPY 246
G G+G S +
Sbjct: 182 G-GIGSRSGGF 191
Score = 496 (179.7 bits), Expect = 7.3e-129, Sum P(3) = 7.3e-129
Identities = 90/146 (61%), Positives = 111/146 (76%)
Query: 466 HRLQIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQT 525
H+ +HL+ E++L++ +GR+GG++ FE GLLTLRI+DE YGRI + L+ T+G+Q+QT
Sbjct: 290 HKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQT 349
Query: 526 HPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGG 585
HPNVDKELFKS+T IGLKN KPFPLN D+GVLKWRF S DES +PL+INCWPSDNG GG
Sbjct: 350 HPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINCWPSDNGEGG 409
Query: 586 CDVNIXXXXXXXXXXLNQVTISIPLP 611
CDVNI L V I IPLP
Sbjct: 410 CDVNIEYELEAQQLELQDVAIVIPLP 435
Score = 258 (95.9 bits), Expect = 2.5e-83, Sum P(3) = 2.5e-83
Identities = 58/112 (51%), Positives = 71/112 (63%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKV 60
PEY +LDE E+ +NAF+LIFAFDEIVALGYRESVNLAQ++TFVEMDSHEEKVYQAVR+
Sbjct: 91 PEYSHSLDEKEIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVYQAVRQT 150
Query: 61 CYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSV 112
R R + + E+ R R+E P L G + D +
Sbjct: 151 --QERDARQK----MREKAKELQRQRMEASKRGGPSLGGIGSRSGGFSADGI 196
Score = 124 (48.7 bits), Expect = 9.8e-90, Sum P(3) = 9.8e-90
Identities = 22/43 (51%), Positives = 35/43 (81%)
Query: 419 LHR--IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYG 459
+H+ +HL+ E++L++ +GR+GG++ FE GLLTLRI+DE YG
Sbjct: 289 IHKESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYG 331
Score = 113 (44.8 bits), Expect = 7.3e-129, Sum P(3) = 7.3e-129
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 305 AQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVIS-GPA 347
++A KPA S A+KLG KS DV+SFVDQLK+EGEK+ + PA
Sbjct: 223 SKAAASKPA-SRNALKLGGKSKDVDSFVDQLKNEGEKIANLAPA 265
>MGI|MGI:2387591 [details] [associations]
symbol:Arcn1 "archain 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0021691 "cerebellar
Purkinje cell layer maturation" evidence=IMP] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0030137 "COPI-coated vesicle"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0043473 "pigmentation" evidence=IMP] [GO:0048193 "Golgi vesicle
transport" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 MGI:MGI:2387591
GO:GO:0006886 GO:GO:0016192 EMBL:CH466522 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AK028556
EMBL:BC017124 EMBL:BC023728 EMBL:BC033387 EMBL:BC034754
EMBL:BC083152 IPI:IPI00313558 RefSeq:NP_666097.3 UniGene:Mm.371682
UniGene:Mm.465799 ProteinModelPortal:Q5XJY5 STRING:Q5XJY5
PhosphoSite:Q5XJY5 REPRODUCTION-2DPAGE:Q5XJY5 PaxDb:Q5XJY5
PRIDE:Q5XJY5 Ensembl:ENSMUST00000034607 GeneID:213827
KEGG:mmu:213827 InParanoid:Q91W48 NextBio:374120 Bgee:Q5XJY5
CleanEx:MM_ARCN1 Genevestigator:Q5XJY5
GermOnline:ENSMUSG00000032096 Uniprot:Q5XJY5
Length = 511
Score = 662 (238.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 135/207 (65%), Positives = 163/207 (78%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 181
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLES 263
G GS+ G T ++E+
Sbjct: 182 GFGGFGSSAVSGGSTAAMITET-IIET 207
Score = 451 (163.8 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 77/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+GRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVVITIPLP 414
Score = 250 (93.1 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 132 (51.5 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 388 FENTLKTPFAT--SVNYHVNFSHLNKLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFEL 445
F + LK+ T S N S K+ + + +H++ EE++ ++ GR+GG++ EL
Sbjct: 238 FVDKLKSEGETIMSSNMGKRTSEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMEL 297
Query: 446 HGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIISVGRNGGIET--FELHGLLTLRISD 503
HG++ LRISD+K+G R+++H+ E++ + + + ++ F L+ L+ +
Sbjct: 298 HGMIMLRISDDKFG-------RIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPE 350
Query: 504 EKY 506
+ +
Sbjct: 351 KSF 353
Score = 111 (44.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S + K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSN-MGKRTSEATKVHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>RGD|1359110 [details] [associations]
symbol:Arcn1 "archain 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0021691 "cerebellar Purkinje cell layer
maturation" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030137 "COPI-coated vesicle" evidence=ISO] [GO:0043473
"pigmentation" evidence=ISO] [GO:0048193 "Golgi vesicle transport"
evidence=ISO] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 RGD:1359110
GO:GO:0006886 GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BC081979 IPI:IPI00373289 RefSeq:NP_001007663.1 UniGene:Rn.2185
ProteinModelPortal:Q66H80 STRING:Q66H80 PhosphoSite:Q66H80
PRIDE:Q66H80 Ensembl:ENSRNOT00000018598 GeneID:300674
KEGG:rno:300674 UCSC:RGD:1359110 InParanoid:Q66H80 NextBio:647284
Genevestigator:Q66H80 GermOnline:ENSRNOG00000013843 Uniprot:Q66H80
Length = 511
Score = 662 (238.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 135/207 (65%), Positives = 163/207 (78%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 181
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLES 263
G GS+ G T ++E+
Sbjct: 182 GFGGFGSSAVSGGSTAAMITET-IIET 207
Score = 451 (163.8 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 77/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+GRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVVITIPLP 414
Score = 250 (93.1 bits), Expect = 1.5e-77, Sum P(3) = 1.5e-77
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 130 (50.8 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 388 FENTLKTPFAT--SVNYHVNFSHLNKLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFEL 445
F + LK+ T S N S K+ + + +H++ EE++ ++ GR+GG++ EL
Sbjct: 238 FVDKLKSEGETIMSSNMGKRTSEAAKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMEL 297
Query: 446 HGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIISVGRNGGIET--FELHGLLTLRISD 503
HG++ LRISD+K+G R+++H+ E++ + + + ++ F L+ L+ +
Sbjct: 298 HGMIMLRISDDKFG-------RIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPE 350
Query: 504 EKY 506
+ +
Sbjct: 351 KSF 353
Score = 111 (44.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S + K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSN-MGKRTSEAAKVHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>UNIPROTKB|I3LBY0 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:FP565446
RefSeq:XP_003357366.1 Ensembl:ENSSSCT00000028599 GeneID:100622860
KEGG:ssc:100622860 Uniprot:I3LBY0
Length = 511
Score = 663 (238.4 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 135/207 (65%), Positives = 163/207 (78%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 181
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLES 263
G GS+ G T ++E+
Sbjct: 182 GFGGFGSSTVSGSSTAAMITET-IIET 207
Score = 450 (163.5 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 77/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+GRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVIITIPLP 414
Score = 250 (93.1 bits), Expect = 2.4e-77, Sum P(3) = 2.4e-77
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 131 (51.2 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 388 FENTLKTPFAT--SVNYHVNFSHLNKLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFEL 445
F + LK+ T S N S K+ + + +H++ EE++ ++ GR+GG++ EL
Sbjct: 238 FVDKLKSEGETIMSSNMGKRTSDATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMEL 297
Query: 446 HGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIISVGRNGGIET--FELHGLLTLRISD 503
HG++ LRISD+K+G R+++H+ E++ + + + ++ F L+ L+ +
Sbjct: 298 HGMIMLRISDDKFG-------RIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPE 350
Query: 504 EKY 506
+ +
Sbjct: 351 KSF 353
Score = 110 (43.8 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S + K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSN-MGKRTSDATKVHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>UNIPROTKB|F1PRT4 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:AAEX03003446
RefSeq:XP_536552.2 Ensembl:ENSCAFT00000020001 GeneID:479415
KEGG:cfa:479415 Uniprot:F1PRT4
Length = 511
Score = 662 (238.1 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 135/207 (65%), Positives = 163/207 (78%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 181
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLES 263
G GS+ G T ++E+
Sbjct: 182 GFGGFGSSAVSGGSTAAMITET-IIET 207
Score = 450 (163.5 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 77/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+GRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVIITIPLP 414
Score = 250 (93.1 bits), Expect = 1.9e-77, Sum P(3) = 1.9e-77
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 132 (51.5 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 32/123 (26%), Positives = 67/123 (54%)
Query: 388 FENTLKTPFAT--SVNYHVNFSHLNKLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFEL 445
F + LK+ T S N S K+ + + +H++ EE++ ++ GR+GG++ EL
Sbjct: 238 FVDKLKSEGETIMSSNMGKRTSEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMEL 297
Query: 446 HGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIISVGRNGGIET--FELHGLLTLRISD 503
HG++ LRISD+K+G R+++H+ E++ + + + ++ F L+ L+ +
Sbjct: 298 HGMIMLRISDDKFG-------RIRLHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPE 350
Query: 504 EKY 506
+ +
Sbjct: 351 KSF 353
Score = 111 (44.1 bits), Expect = 9.3e-121, Sum P(3) = 9.3e-121
Identities = 27/66 (40%), Positives = 46/66 (69%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S + K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSSN-MGKRTSEATKVHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>ZFIN|ZDB-GENE-021031-2 [details] [associations]
symbol:arcn1a "archain 1a" species:7955 "Danio rerio"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-021031-2 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BX294169 EMBL:BC045318 IPI:IPI00509974 RefSeq:NP_958867.1
UniGene:Dr.77264 STRING:Q7ZW27 Ensembl:ENSDART00000014666
GeneID:266982 KEGG:dre:266982 CTD:266982 InParanoid:Q7ZW27
NextBio:20804844 Uniprot:Q7ZW27
Length = 509
Score = 652 (234.6 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 133/190 (70%), Positives = 157/190 (82%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G A+VSRQFVEMTR R+EGLLAAFPKLM++GKQHTFVET+SVRYVYQPL
Sbjct: 2 VLLAAAVCTKAGKALVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETESVRYVYQPL 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+L+TTK SNILEDLETLRLFSRVIPEYCR L+E+E++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELK--RQRMESAKKFPK 234
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL+ R+ E KK P
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQIRRDTERGKKGPG 181
Query: 235 MGSGVGVGSN 244
G G GS+
Sbjct: 182 FG---GFGSS 188
Score = 452 (164.2 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 81/146 (55%), Positives = 109/146 (74%)
Query: 466 HRLQIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQT 525
H +HLR EE++ ++ GR+GG++ E+ G++TLR+SDEK GRI++ + N D RG+Q+QT
Sbjct: 268 HTESVHLRVEERITLTCGRDGGLQNMEILGMITLRVSDEKNGRIRLNINNNDKRGVQLQT 327
Query: 526 HPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGG 585
HPNVDK+LF + IGLKNP K FPL +D+GVLKWR +TDES +PL+INCWPS++G+G
Sbjct: 328 HPNVDKKLFTLDSVIGLKNPDKSFPLKSDVGVLKWRLQTTDESLIPLTINCWPSESGTG- 386
Query: 586 CDVNIXXXXXXXXXXLNQVTISIPLP 611
CDVNI LN V ISIP+P
Sbjct: 387 CDVNIEYELQDDSLELNDVVISIPVP 412
Score = 245 (91.3 bits), Expect = 7.9e-75, Sum P(3) = 7.9e-75
Identities = 44/59 (74%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+E+E++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 122 (48.0 bits), Expect = 6.6e-83, Sum P(3) = 6.6e-83
Identities = 27/85 (31%), Positives = 49/85 (57%)
Query: 422 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIIS 481
+HLR EE++ ++ GR+GG++ E+ G++TLR+SDEK G RL I+ + + +
Sbjct: 272 VHLRVEERITLTCGRDGGLQNMEILGMITLRVSDEKNGRI-----RLNINNNDKRGVQLQ 326
Query: 482 VGRNGGIETFELHGLLTLRISDEKY 506
N + F L ++ L+ D+ +
Sbjct: 327 THPNVDKKLFTLDSVIGLKNPDKSF 351
Score = 89 (36.4 bits), Expect = 1.3e-117, Sum P(3) = 1.3e-117
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 316 AKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIP 359
+KA+KL K +V+ FVD+LKSEGE VI + S S +P
Sbjct: 221 SKALKLVGKGKEVDDFVDKLKSEGENVILPGTGKRPSDASKSLP 264
>UNIPROTKB|B0YIW6 [details] [associations]
symbol:ARCN1 "Archain 1, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 EMBL:CH471065
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 HOGENOM:HOG000203984
PANTHER:PTHR10121 HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ
EMBL:AP000941 UniGene:Hs.33642 HGNC:HGNC:649 ChiTaRS:ARCN1
EMBL:EF444951 IPI:IPI00298520 STRING:B0YIW6 Ensembl:ENST00000359415
UCSC:uc009zag.3 Uniprot:B0YIW6
Length = 552
Score = 665 (239.2 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 147/290 (50%), Positives = 198/290 (68%)
Query: 59 KVCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQP 118
+V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP
Sbjct: 42 QVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 101
Query: 119 LEKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALG 178
+EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALG
Sbjct: 102 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 161
Query: 179 YRESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKM 235
YRE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 162 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 221
Query: 236 GSGVGVGSNPYFGXXXXXXXPVTPVLESADISIRSSYIAQTVQREKKFRDIRIGRKSLEN 295
G GS+ G +T + D + + + +++G K E
Sbjct: 222 PGFGGFGSSAVSGGSTAAM--ITETIIETD---KPKVAPAPARPSGPSKALKLGAKGKEV 276
Query: 296 ESYPLRIKIAQAILWKPAV---SAKAMKLGSKSHDVESFVDQLKSEGEKV 342
+++ ++K + ++ +++A K+ + ++ES +K E EK+
Sbjct: 277 DNFVDKLKSEGETIMSSSMGKRTSEATKMHAPPINMESV--HMKIE-EKI 323
Score = 455 (165.2 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 78/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+KYGRI++ + N+D +G+Q+QTHPNV
Sbjct: 315 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNV 374
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 375 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 433
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 434 IEYELQEDNLELNDVVITIPLP 455
Score = 250 (93.1 bits), Expect = 4.4e-78, Sum P(3) = 4.4e-78
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 132 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 190
Score = 133 (51.9 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 25/90 (27%), Positives = 55/90 (61%)
Query: 419 LHRIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQL 478
+ +H++ EE++ ++ GR+GG++ ELHG++ LRISD+KYG R+++H+ E++
Sbjct: 312 MESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYG-------RIRLHVENEDKK 364
Query: 479 IISVGRNGGIET--FELHGLLTLRISDEKY 506
+ + + ++ F L+ L+ ++ +
Sbjct: 365 GVQLQTHPNVDKKLFTAESLIGLKNPEKSF 394
Score = 112 (44.5 bits), Expect = 4.4e-78, Sum P(3) = 4.4e-78
Identities = 27/66 (40%), Positives = 47/66 (71%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S ++ K ++ ++K+
Sbjct: 252 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-SMGKRTSEATKMHAPP 309
Query: 363 ISNMDS 368
I NM+S
Sbjct: 310 I-NMES 314
>UNIPROTKB|P48444 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0005829 GO:GO:0006886 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0048205 GO:GO:0006890 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 HOVERGEN:HBG005381 EMBL:X81197
EMBL:X81198 EMBL:AK304019 EMBL:AP000941 EMBL:BC093636 EMBL:BC093638
IPI:IPI00514053 IPI:IPI00915422 PIR:A56750 RefSeq:NP_001135753.1
RefSeq:NP_001646.2 UniGene:Hs.33642 ProteinModelPortal:P48444
IntAct:P48444 STRING:P48444 PhosphoSite:P48444 DMDM:1351970
OGP:P48444 PaxDb:P48444 PRIDE:P48444 Ensembl:ENST00000264028
Ensembl:ENST00000392859 GeneID:372 KEGG:hsa:372 UCSC:uc001ptq.3
GeneCards:GC11P118444 HGNC:HGNC:649 HPA:HPA037573 MIM:600820
neXtProt:NX_P48444 PharmGKB:PA24931 ChiTaRS:ARCN1 GenomeRNAi:372
NextBio:1553 ArrayExpress:P48444 Bgee:P48444 CleanEx:HS_ARCN1
Genevestigator:P48444 GermOnline:ENSG00000095139 Uniprot:P48444
Length = 511
Score = 664 (238.8 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 147/289 (50%), Positives = 197/289 (68%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R ++ ++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 181
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLESADISIRSSYIAQTVQREKKFRDIRIGRKSLENE 296
G GS+ G +T + D + + + +++G K E +
Sbjct: 182 GFGGFGSSAVSGGSTAAM--ITETIIETD---KPKVAPAPARPSGPSKALKLGAKGKEVD 236
Query: 297 SYPLRIKIAQAILWKPAV---SAKAMKLGSKSHDVESFVDQLKSEGEKV 342
++ ++K + ++ +++A K+ + ++ES +K E EK+
Sbjct: 237 NFVDKLKSEGETIMSSSMGKRTSEATKMHAPPINMESV--HMKIE-EKI 282
Score = 455 (165.2 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 78/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+KYGRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVVITIPLP 414
Score = 250 (93.1 bits), Expect = 4.4e-78, Sum P(3) = 4.4e-78
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 133 (51.9 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 25/90 (27%), Positives = 55/90 (61%)
Query: 419 LHRIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQL 478
+ +H++ EE++ ++ GR+GG++ ELHG++ LRISD+KYG R+++H+ E++
Sbjct: 271 MESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYG-------RIRLHVENEDKK 323
Query: 479 IISVGRNGGIET--FELHGLLTLRISDEKY 506
+ + + ++ F L+ L+ ++ +
Sbjct: 324 GVQLQTHPNVDKKLFTAESLIGLKNPEKSF 353
Score = 112 (44.5 bits), Expect = 4.4e-78, Sum P(3) = 4.4e-78
Identities = 27/66 (40%), Positives = 47/66 (71%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE ++S ++ K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-SMGKRTSEATKMHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>UNIPROTKB|P53619 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0006891 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 EMBL:X94265
IPI:IPI00706192 RefSeq:NP_001181942.1 UniGene:Bt.23103
ProteinModelPortal:P53619 IntAct:P53619 STRING:P53619 PRIDE:P53619
Ensembl:ENSBTAT00000008799 GeneID:533078 KEGG:bta:533078 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 InParanoid:P53619
OMA:NNDVGVL OrthoDB:EOG4FBHSQ NextBio:20875903 Uniprot:P53619
Length = 511
Score = 666 (239.5 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 143/248 (57%), Positives = 178/248 (71%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R + A++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRD-AERQGKKA 180
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLESADISIRSSYIAQTVQREK-KFRDIRIGRKSLEN 295
G G G FG T ++ I +A R + +++G K E
Sbjct: 181 PGFG-G----FGSSTVSGGSTTSMITETIIETDKPKVAPAPARPSGPSKALKLGAKGKEV 235
Query: 296 ESYPLRIK 303
+++ ++K
Sbjct: 236 DNFVDKLK 243
Score = 451 (163.8 bits), Expect = 4.3e-111, Sum P(2) = 4.3e-111
Identities = 77/142 (54%), Positives = 113/142 (79%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+GRI++ + N+D +G+Q+QTHPNV
Sbjct: 274 VHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRLHVENEDKKGVQLQTHPNV 333
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G CDVN
Sbjct: 334 DKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG-CDVN 392
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I+IPLP
Sbjct: 393 IEYELQEDNLELNDVVITIPLP 414
Score = 250 (93.1 bits), Expect = 5.6e-78, Sum P(3) = 5.6e-78
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 129 (50.5 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 24/90 (26%), Positives = 55/90 (61%)
Query: 419 LHRIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQL 478
+ +H++ EE++ ++ GR+GG++ ELHG++ LRISD+K+G R+++H+ E++
Sbjct: 271 MESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFG-------RIRLHVENEDKK 323
Query: 479 IISVGRNGGIET--FELHGLLTLRISDEKY 506
+ + + ++ F L+ L+ ++ +
Sbjct: 324 GVQLQTHPNVDKKLFTAESLIGLKNPEKSF 353
Score = 115 (45.5 bits), Expect = 5.6e-78, Sum P(3) = 5.6e-78
Identities = 28/66 (42%), Positives = 46/66 (69%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE +IS + K ++ ++K+
Sbjct: 211 KVAPAPA-RPSGPSKALKLGAKGKEVDNFVDKLKSEGENIISSN-MGKRTSEATKVHAPP 268
Query: 363 ISNMDS 368
I NM+S
Sbjct: 269 I-NMES 273
>UNIPROTKB|Q5ZL57 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AJ719877
IPI:IPI00600471 RefSeq:NP_001072967.1 UniGene:Gga.1878
ProteinModelPortal:Q5ZL57 IntAct:Q5ZL57 STRING:Q5ZL57 PRIDE:Q5ZL57
Ensembl:ENSGALT00000012021 GeneID:770561 KEGG:gga:770561
InParanoid:Q5ZL57 NextBio:20920779 Uniprot:Q5ZL57
Length = 510
Score = 667 (239.9 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 142/248 (57%), Positives = 177/248 (71%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+ENE++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMG 236
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +MR KAKEL++ R + A++ K
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRD-AERLGKKA 180
Query: 237 SGVGVGSNPYFGXXXXXXXPVTPVLESADISIRSSYIAQTVQREK-KFRDIRIGRKSLEN 295
G G G FG ++ I +A R + +++G K E
Sbjct: 181 PGFG-G----FGSSAVSGGTTAAMITETIIETEKPKVAPAPSRPSGPSKALKLGAKGKEV 235
Query: 296 ESYPLRIK 303
+++ ++K
Sbjct: 236 DNFVDKLK 243
Score = 444 (161.4 bits), Expect = 1.9e-110, Sum P(2) = 1.9e-110
Identities = 76/142 (53%), Positives = 110/142 (77%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H++ EE++ ++ GR+GG++ ELHG++ L ISDEK+ RI++ + N+D RG+Q+QTHPNV
Sbjct: 273 VHMKIEEKISLTCGRDGGLQNMELHGMIMLHISDEKFARIRLHVENEDKRGVQLQTHPNV 332
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+LF ++++IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+ CDVN
Sbjct: 333 DKKLFTAESQIGLKNPEKSFPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNS-CDVN 391
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I IPLP
Sbjct: 392 IEYELQEESLELNDVVIMIPLP 413
Score = 250 (93.1 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR L+ENE++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRE 149
Score = 120 (47.3 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 411 KLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQI 470
K+L+ + +H++ EE++ ++ GR+GG++ ELHG++ L ISDEK+ R+++
Sbjct: 262 KVLAPPINMESVHMKIEEKISLTCGRDGGLQNMELHGMIMLHISDEKFA-------RIRL 314
Query: 471 HLRQEEQ 477
H+ E++
Sbjct: 315 HVENEDK 321
Score = 114 (45.2 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 28/66 (42%), Positives = 47/66 (71%)
Query: 303 KIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
K+A A +P+ +KA+KLG+K +V++FVD+LKSEGE +++ ++ K ST ++K+
Sbjct: 211 KVAPAPS-RPSGPSKALKLGAKGKEVDNFVDKLKSEGENIMT--SVGKRSTEAAKVLAPP 267
Query: 363 ISNMDS 368
I NM+S
Sbjct: 268 I-NMES 272
>ZFIN|ZDB-GENE-040121-7 [details] [associations]
symbol:arcn1b "archain 1b" species:7955 "Danio rerio"
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-040121-7 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OMA:NNDVGVL
OrthoDB:EOG4FBHSQ EMBL:CR385077 EMBL:BC050499 EMBL:BC075749
IPI:IPI00506794 RefSeq:NP_973722.1 UniGene:Dr.75156 STRING:Q7ZU89
Ensembl:ENSDART00000047902 GeneID:399661 KEGG:dre:399661 CTD:399661
InParanoid:Q7ZU89 NextBio:20816615 Uniprot:Q7ZU89
Length = 512
Score = 663 (238.4 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 142/244 (58%), Positives = 175/244 (71%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPL 119
V + C G AIVSRQFVEMTR R+EGLLAAFPKLM++GKQHTFVETDSVRYVYQPL
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETDSVRYVYQPL 61
Query: 120 EKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGY 179
EKLYM+LITTK SNILEDLETLRLFSRVIPEYCR L+E+E++++ F LIFAFDEIVALGY
Sbjct: 62 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALGY 121
Query: 180 RESVNLAQVRTFVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMES---AKKFP 233
RE+VNLAQ+RTF EMDSHEEKV++AVR+ REA+ +M+ KAKEL+R R ++ KK P
Sbjct: 122 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMKRKAKELQRARQDAERAGKKSP 181
Query: 234 KMGSGVGVGSNPYFGXXXXXXXPVTPVLES-ADISIRSSYIAQTVQREKKFRDIRIGRKS 292
G G G + P A S+R S ++ ++ K +++
Sbjct: 182 GFG-GFGSSGMSSITSATIITDTIEPEKPKVAPASVRPSGSSKALKLGAKGKEVDFFVDK 240
Query: 293 LENE 296
L++E
Sbjct: 241 LKSE 244
Score = 437 (158.9 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 78/143 (54%), Positives = 110/143 (76%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+HLR EE++ ++ GR+GG++ E+ G++TL+++DEK GRI +++ N D +G Q+QTHP+V
Sbjct: 273 VHLRVEEKISLTCGRDGGLQNMEVLGMITLKVADEKNGRIIIVVNNNDKKGAQLQTHPHV 332
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG-GCDV 588
DK+LF +++ IGLKN K FPLN+D+GVLKWR STDES +PL+INCWPS++GSG GCDV
Sbjct: 333 DKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDESLIPLTINCWPSESGSGSGCDV 392
Query: 589 NIXXXXXXXXXXLNQVTISIPLP 611
NI LN V I+IP+P
Sbjct: 393 NIEYELQDEGLELNDVVITIPVP 415
Score = 247 (92.0 bits), Expect = 4.9e-77, Sum P(3) = 4.9e-77
Identities = 51/86 (59%), Positives = 66/86 (76%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKV 60
PEYCR L+E+E++++ F LIFAFDEIVALGYRE+VNLAQ+RTF EMDSHEEKV++AVR+
Sbjct: 91 PEYCRVLEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRET 150
Query: 61 CYLSRTCRSIGIAIVSRQFVEMTRAR 86
R + A + R+ E+ RAR
Sbjct: 151 --QEREAK----AEMKRKAKELQRAR 170
Score = 123 (48.4 bits), Expect = 4.9e-77, Sum P(3) = 4.9e-77
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 299 PLRIKIAQAILWKPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKI 358
P + K+A A + +P+ S+KA+KLG+K +V+ FVD+LKSEGE +++ A K S S +
Sbjct: 206 PEKPKVAPASV-RPSGSSKALKLGAKGKEVDFFVDKLKSEGENIVTTSAGRKASEASKVL 264
Query: 359 -PTTNISNM 366
P N+ ++
Sbjct: 265 QPPVNMESV 273
Score = 115 (45.5 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 34/113 (30%), Positives = 63/113 (55%)
Query: 407 SHLNKLLSIMFLLHRIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYF----- 461
S +K+L + +HLR EE++ ++ GR+GG++ E+ G++TL+++DEK G
Sbjct: 258 SEASKVLQPPVNMESVHLRVEEKISLTCGRDGGLQNMEVLGMITLKVADEKNGRIIIVVN 317
Query: 462 -GDL-GHRLQIHLRQEEQLIIS---VGRNGGIETFELH---GLLTLRI--SDE 504
D G +LQ H +++L + +G ++F L+ G+L R+ +DE
Sbjct: 318 NNDKKGAQLQTHPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDE 370
Score = 45 (20.9 bits), Expect = 7.1e-56, Sum P(3) = 7.1e-56
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 35 VNLAQVRTFVEMDSHEEKVYQAVRKVCYLSRTCRSIGI 72
+N + TFVE DS VYQ + K+ + T ++ I
Sbjct: 40 MNTGKQHTFVETDS-VRYVYQPLEKLYMVLITTKNSNI 76
>WB|WBGene00015734 [details] [associations]
symbol:C13B9.3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0016192 GO:GO:0018996
GO:GO:0000003 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 GeneTree:ENSGT00390000017207
OMA:NNDVGVL EMBL:FO080523 PIR:C88487 RefSeq:NP_498463.1
ProteinModelPortal:Q09236 DIP:DIP-26714N MINT:MINT-1070043
STRING:Q09236 PaxDb:Q09236 PRIDE:Q09236 EnsemblMetazoa:C13B9.3
GeneID:175940 KEGG:cel:CELE_C13B9.3 UCSC:C13B9.3 CTD:175940
WormBase:C13B9.3 InParanoid:Q09236 NextBio:890392 Uniprot:Q09236
Length = 515
Score = 533 (192.7 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 112/195 (57%), Positives = 144/195 (73%)
Query: 61 CYLSRTCRSIGIAIVSRQFV-EMTRARIEGLLAAFPKLMSSGK-----QHTFVETDSVRY 114
C LS+T G +V+RQFV +M R+R+EGL+ AFPKL+ + K QHTFVETDSVRY
Sbjct: 7 CILSKT----GKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSVRY 62
Query: 115 VYQPLEKLYMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEI 174
VY PL+ +Y++L+TTK SNILEDLETLRLF RVIPEYCR+ +E E+ + F LIFAFDE+
Sbjct: 63 VYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIFAFDEV 122
Query: 175 VALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKRE---AENKMREKAKELKRQRMESAKK 231
V LGYRESVNLAQ+RTF EMDSHEE+V+ +++ + A+ M EKAKELKR + E+ +
Sbjct: 123 VTLGYRESVNLAQIRTFTEMDSHEERVFMQIKEAQEKAAKQAMAEKAKELKRAQKEALSR 182
Query: 232 F--PKMGSGVGVGSN 244
P S G+ S+
Sbjct: 183 GLKPSYQSSTGISSS 197
Score = 298 (110.0 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 54/142 (38%), Positives = 87/142 (61%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNV 529
+H+R EE++ V R+GG+E+ E+ +TL I ++ I + + N G Q+Q HPN+
Sbjct: 279 VHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEFIPISIKMNNGSAAGTQLQVHPNL 338
Query: 530 DKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVN 589
DK+ ++S + + +K KP+P+N+D+G+LKW+ ++E LP+S NCWP ++ S G VN
Sbjct: 339 DKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQLPISFNCWPQES-SDGVQVN 397
Query: 590 IXXXXXXXXXXLNQVTISIPLP 611
I LN V I +PLP
Sbjct: 398 IEYTLQREDITLNNVRIIVPLP 419
Score = 215 (80.7 bits), Expect = 5.0e-46, Sum P(3) = 5.0e-46
Identities = 38/59 (64%), Positives = 49/59 (83%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
PEYCR+ +E E+ + F LIFAFDE+V LGYRESVNLAQ+RTF EMDSHEE+V+ +++
Sbjct: 97 PEYCRSNEEKEILAHDFDLIFAFDEVVTLGYRESVNLAQIRTFTEMDSHEERVFMQIKE 155
Score = 77 (32.2 bits), Expect = 1.2e-87, Sum P(3) = 1.2e-87
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 312 PAVSAKAMKLGSKSHDVESFVDQLKSEGEKV--ISGPALSK-VSTLSSKIPT 360
P KA+KLG K+++ + F+D L+ +G+ + + +LS VS+L++ I T
Sbjct: 219 PIGGGKALKLGGKTNNEDDFLDTLRQQGQSIAPVQKASLSGGVSSLAAPIST 270
Score = 72 (30.4 bits), Expect = 6.2e-64, Sum P(3) = 6.2e-64
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 422 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKY 458
+H+R EE++ V R+GG+E+ E+ +TL I ++
Sbjct: 279 VHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEF 315
>UNIPROTKB|P49661 [details] [associations]
symbol:LOC_Os01g61710 "Coatomer subunit delta-3"
species:39947 "Oryza sativa Japonica Group" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005798 "Golgi-associated vesicle" evidence=ISS]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0005798 GO:GO:0030131 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AP008207 GO:GO:0030663 EMBL:Z67962 EMBL:AP004366 EMBL:AK069745
EMBL:D22365 PIR:T03598 RefSeq:NP_001044715.1 UniGene:Os.5854
ProteinModelPortal:P49661 IntAct:P49661
EnsemblPlants:LOC_Os01g61710.2 EnsemblPlants:LOC_Os01g61710.3
EnsemblPlants:LOC_Os01g61710.4 GeneID:4327409 KEGG:osa:4327409
Gramene:P49661 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 Uniprot:P49661
Length = 518
Score = 477 (173.0 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 97/173 (56%), Positives = 131/173 (75%)
Query: 71 GIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTK 130
G A+VSRQFV+M+R RI+GLLAAFPKL+ SGKQHT+VET++VRYVYQP+E LY+LLIT K
Sbjct: 13 GKALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQPIEALYLLLITNK 72
Query: 131 TSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRT 190
SNILEDL+TLRL S++IPEY +LDE V AF L+FAF E ++LG +E+V +AQV+
Sbjct: 73 QSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELLFAFIEAISLGNKENVTVAQVKQ 132
Query: 191 FVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKKFPKMGSGVG 240
+ EM+SHEEK+++ V + E ++ MR K E+++ + + K P G G G
Sbjct: 133 YCEMESHEEKLHKLVMQSKINETKDVMRRKVTEIEKSKTDRGK--PDKG-GFG 182
Score = 294 (108.6 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 58/138 (42%), Positives = 90/138 (65%)
Query: 475 EEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELF 534
EE+L ++V R+GG+ F++ G L L+I ++ G I++ + N+D G+ +THPN++KELF
Sbjct: 285 EEKLNVTVKRDGGVSNFDIQGTLALQILNDTDGFIQLQIENQDVPGLNFKTHPNINKELF 344
Query: 535 KSKTEIGLKNPSKPFPLN-NDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVNIXXX 593
S+ +G K+P++PFP N+ ++KWR +ES LPL++NCWPS +G+ VNI
Sbjct: 345 NSQQIVGAKDPNRPFPSGQNETPLVKWRIQELNESSLPLAVNCWPSVSGNETY-VNIEYE 403
Query: 594 XXXXXXXLNQVTISIPLP 611
L+ V ISIPLP
Sbjct: 404 ASEMFD-LHNVVISIPLP 420
Score = 151 (58.2 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 29/57 (50%), Positives = 42/57 (73%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAV 57
PEY +LDE V AF L+FAF E ++LG +E+V +AQV+ + EM+SHEEK+++ V
Sbjct: 91 PEYAPSLDEEGVCKAAFELLFAFIEAISLGNKENVTVAQVKQYCEMESHEEKLHKLV 147
Score = 73 (30.8 bits), Expect = 5.0e-57, Sum P(3) = 5.0e-57
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 427 EEQLIISVGRNGGIETFELHGLLTLRISDEKYGY 460
EE+L ++V R+GG+ F++ G L L+I ++ G+
Sbjct: 285 EEKLNVTVKRDGGVSNFDIQGTLALQILNDTDGF 318
Score = 66 (28.3 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 319 MKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPTTN 362
MKL SK+ F++ LK+EGE ++ S + SS IP ++
Sbjct: 236 MKL-SKAQKTNQFLESLKAEGEVILEDTQPSATQSRSSYIPPSD 278
>TAIR|locus:2175269 [details] [associations]
symbol:AT5G05010 species:3702 "Arabidopsis thaliana"
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 EMBL:AB005245 GO:GO:0030131 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 EMBL:AY054464
EMBL:AY054658 EMBL:AY114626 EMBL:AK221894 IPI:IPI00518859
RefSeq:NP_001031836.1 RefSeq:NP_568147.1 UniGene:At.20926
ProteinModelPortal:Q93Y22 STRING:Q93Y22 PaxDb:Q93Y22 PRIDE:Q93Y22
EnsemblPlants:AT5G05010.1 EnsemblPlants:AT5G05010.2 GeneID:830383
KEGG:ath:AT5G05010 TAIR:At5g05010 InParanoid:Q93Y22 OMA:SMESHEE
PhylomeDB:Q93Y22 Genevestigator:Q93Y22 Uniprot:Q93Y22
Length = 527
Score = 482 (174.7 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 94/177 (53%), Positives = 135/177 (76%)
Query: 71 GIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTK 130
G IVSR +V+M+R RIEGLLAAFPKL+ GKQHT++ET++VRYVYQP+E L++LL+TTK
Sbjct: 13 GKVIVSRHYVDMSRIRIEGLLAAFPKLVGMGKQHTYIETENVRYVYQPIEALFLLLVTTK 72
Query: 131 TSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRT 190
SNILEDL TL L S+++PEY +LDE ++ +F LIFAFDE+++LG++ESV +AQV+
Sbjct: 73 QSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELIFAFDEVISLGHKESVTVAQVKQ 132
Query: 191 FVEMDSHEEKVYQAVRK---REAENKMREKAKELKRQRMESAKK--FPKMGSGVGVG 242
+ EM+SHEEK+++ V + + ++ M+ KA E+ + ++E K F MGS +G G
Sbjct: 133 YCEMESHEEKLHKLVMQSKINDTKDVMKRKANEIDKSKIEKNKPGGFSSMGS-MGSG 188
Score = 267 (99.0 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 52/143 (36%), Positives = 91/143 (63%)
Query: 472 LRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDK 531
L EE+L +++ R+GG+ +F++ G L+L+I +++ G ++V +A + I +THPN+++
Sbjct: 287 LTVEEKLNVALRRDGGLSSFDMQGTLSLQILNQEDGFVQVQIATGENPEILFKTHPNINR 346
Query: 532 ELFKSKTEIGLKNPSKPFPLN---NDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDV 588
++F ++ +GLK P +PFP + +G+L+WR DES +PL+INCWPS +G+ V
Sbjct: 347 DMFNNENILGLKRPDQPFPTGQGGDGVGLLRWRMQRADESMVPLTINCWPSVSGNETY-V 405
Query: 589 NIXXXXXXXXXXLNQVTISIPLP 611
++ N V IS+PLP
Sbjct: 406 SLEYEASSMFDLTN-VIISVPLP 427
Score = 170 (64.9 bits), Expect = 2.5e-34, Sum P(3) = 2.5e-34
Identities = 30/57 (52%), Positives = 46/57 (80%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAV 57
PEY +LDE ++ +F LIFAFDE+++LG++ESV +AQV+ + EM+SHEEK+++ V
Sbjct: 91 PEYSMSLDEEGISRASFELIFAFDEVISLGHKESVTVAQVKQYCEMESHEEKLHKLV 147
Score = 84 (34.6 bits), Expect = 8.1e-57, Sum P(3) = 8.1e-57
Identities = 20/83 (24%), Positives = 46/83 (55%)
Query: 424 LRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYFGDLGHRLQIHLRQEEQLIISVG 483
L EE+L +++ R+GG+ +F++ G L+L+I +++ G+ ++QI + +++
Sbjct: 287 LTVEEKLNVALRRDGGLSSFDMQGTLSLQILNQEDGFV-----QVQIATGENPEILFKTH 341
Query: 484 RNGGIETFELHGLLTLRISDEKY 506
N + F +L L+ D+ +
Sbjct: 342 PNINRDMFNNENILGLKRPDQPF 364
Score = 48 (22.0 bits), Expect = 5.5e-76, Sum P(3) = 5.5e-76
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 316 AKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKVSTLSSKIPT 360
+ MKLG + ++ LK+EGE VI + S ++ PT
Sbjct: 240 SSGMKLGKSGKN--QLMESLKAEGEDVIEDVKPTGQSKAAAPPPT 282
>UNIPROTKB|G4MP14 [details] [associations]
symbol:MGG_05676 "Coatomer subunit delta" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 EMBL:CM001231 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121
RefSeq:XP_003710575.1 EnsemblFungi:MGG_05676T0 GeneID:2675981
KEGG:mgr:MGG_05676 Uniprot:G4MP14
Length = 514
Score = 473 (171.6 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 88/167 (52%), Positives = 129/167 (77%)
Query: 67 CRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLL 126
C G A++SRQF EM R+RIE LLA+FPKL SG QHT VE D+VR+VYQPL++LYM+L
Sbjct: 9 CTRGGKAVLSRQFREMPRSRIEALLASFPKLADSGTQHTTVEQDNVRFVYQPLDELYMVL 68
Query: 127 ITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLA 186
IT + SNIL+D+++L LF++V+ C++LDE E+ NA+ L+ AFDE+V LGYRE++ ++
Sbjct: 69 ITNRQSNILQDIDSLHLFAQVVTSTCKSLDEREILKNAYELLSAFDELVTLGYRENLTIS 128
Query: 187 QVRTFVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAK 230
Q++TF+EM+SHEE++ + + + EA + + KAK+L+ QR ESA+
Sbjct: 129 QIKTFLEMESHEERIQEIIARNKELEATEERKRKAKQLEMQRKESAR 175
Score = 241 (89.9 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 50/145 (34%), Positives = 73/145 (50%)
Query: 467 RLQIHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTH 526
R IH+ E + + R G + + + G L LR+SD +IK+ L T G Q +TH
Sbjct: 275 RDSIHITVSENITAKISREGTLNSLGVKGDLNLRVSDPTMTKIKLQLVANPTHGAQFRTH 334
Query: 527 PNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFT--STDESCLPLSINCWPSDNGSG 584
PNVD+ LF S I + + FP+NN +GVL+W T + D S LP+S W + G
Sbjct: 335 PNVDRNLFNSSKVIQMSKADRGFPVNNSVGVLRWMATPKADDTSALPISFTVWVNKGSDG 394
Query: 585 GCDVNIXXXXXXXXXXLNQVTISIP 609
C + + L V++SIP
Sbjct: 395 NCTLTVEYELTGGDE-LRDVSVSIP 418
Score = 174 (66.3 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 27/56 (48%), Positives = 46/56 (82%)
Query: 4 CRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
C++LDE E+ NA+ L+ AFDE+V LGYRE++ ++Q++TF+EM+SHEE++ + + +
Sbjct: 94 CKSLDEREILKNAYELLSAFDELVTLGYRENLTISQIKTFLEMESHEERIQEIIAR 149
Score = 57 (25.1 bits), Expect = 7.6e-53, Sum P(3) = 7.6e-53
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 422 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISD 455
IH+ E + + R G + + + G L LR+SD
Sbjct: 278 IHITVSENITAKISREGTLNSLGVKGDLNLRVSD 311
Score = 46 (21.3 bits), Expect = 4.2e-72, Sum P(3) = 4.2e-72
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 313 AVSAKAMKLGSKSHDVESFVDQLKSE-GEKVISGPALSKVST---LSSKIPTTNISNMDS 368
A K M+LG KS + F ++++ + G ++ P ++ ++ L+S+ P D
Sbjct: 217 APKGKGMQLGKKSKTTDMF-ERVRGDMGNEIDDTPLVAPTASAAPLASEPPRRQSVGTDR 275
Query: 369 YSIFL 373
SI +
Sbjct: 276 DSIHI 280
Score = 37 (18.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 10/49 (20%), Positives = 25/49 (51%)
Query: 63 LSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDS 111
++ TC+S+ + + E+ A E + + + ++ + TF+E +S
Sbjct: 90 VTSTCKSLDEREILKNAYELLSAFDELVTLGYRENLTISQIKTFLEMES 138
>DICTYBASE|DDB_G0268702 [details] [associations]
symbol:copD "coatomer protein complex delta subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030663 "COPI-coated vesicle membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
dictyBase:DDB_G0268702 GO:GO:0006886 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0016192 EMBL:AAFI02000004 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 PANTHER:PTHR10121 OMA:SMESHEE
RefSeq:XP_646874.1 ProteinModelPortal:Q55EZ6 STRING:Q55EZ6
PRIDE:Q55EZ6 EnsemblProtists:DDB0305305 GeneID:8616557
KEGG:ddi:DDB_G0268702 ProtClustDB:CLSZ2846938 Uniprot:Q55EZ6
Length = 540
Score = 490 (177.5 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 92/185 (49%), Positives = 133/185 (71%)
Query: 67 CRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLL 126
C G A++SRQF EMT++R+EGLLAAFPKL+ G+QHTF+ET+++RYVYQPLE LY++L
Sbjct: 9 CTKNGKALLSRQFSEMTKSRVEGLLAAFPKLIGLGRQHTFIETENIRYVYQPLESLYIVL 68
Query: 127 ITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLA 186
IT K SNILEDLETL L ++++PEY DE +++ NAF LIF FDE++A+GY+E V L
Sbjct: 69 ITNKNSNILEDLETLHLLAKLVPEYSN-FDEYDISKNAFELIFTFDEVIAMGYKERVTLQ 127
Query: 187 QVRTFVEMDSHEEKVY---QAVRKREAENKMREKAKELKRQRMESAKKFPKMGSGVGVGS 243
Q++ F+ M+SHEE+ + + ++++EA+ KAKE++R R E + + G G+
Sbjct: 128 QIKHFISMESHEEERFRMEEKIKQKEAQILASSKAKEIERMRHEEMLRGKRSGGYTGISG 187
Query: 244 NPYFG 248
G
Sbjct: 188 GGGMG 192
Score = 223 (83.6 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKV-LLANKDTRGIQMQTHPN 528
+H+ EE V +G +E+ ++ G L+++I+D+ G++KV L K ++ Q THPN
Sbjct: 307 VHITVEESFTSFVESDGTVESIDIKGGLSVQINDQSLGKVKVNLKQGKLSKQFQFITHPN 366
Query: 529 VDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDV 588
+DK LF ++ + L++ K FP G+LKWR + ES +P+ +NCWPS G V
Sbjct: 367 IDKALFGEQSVLRLRDGGKGFPSG---GILKWRCKTNQESMMPIRVNCWPSP-GRDSTTV 422
Query: 589 NIXXXXXXXXXXLNQVTISIPLP 611
N+ L V I IP P
Sbjct: 423 NLEYDSLVGYE-LKSVFIVIPNP 444
Score = 161 (61.7 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 1 PEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKV 60
PEY DE +++ NAF LIF FDE++A+GY+E V L Q++ F+ M+SHEE+ ++ K+
Sbjct: 91 PEYSN-FDEYDISKNAFELIFTFDEVIAMGYKERVTLQQIKHFISMESHEEERFRMEEKI 149
Score = 67 (28.6 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 40/187 (21%), Positives = 80/187 (42%)
Query: 422 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGYF------GDLGHRLQI--HLR 473
+H+ EE V +G +E+ ++ G L+++I+D+ G G L + Q H
Sbjct: 307 VHITVEESFTSFVESDGTVESIDIKGGLSVQINDQSLGKVKVNLKQGKLSKQFQFITHPN 366
Query: 474 QE-----EQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLL-----ANKDTRGIQM 523
+ EQ ++ + R+GG + F G+L R + + + + +D+ + +
Sbjct: 367 IDKALFGEQSVLRL-RDGG-KGFPSGGILKWRCKTNQESMMPIRVNCWPSPGRDSTTVNL 424
Query: 524 QTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGS 583
+ V EL KS I + NP+ P+ N L + + + + C+ I N
Sbjct: 425 EYDSLVGYEL-KS-VFIVIPNPTSNAPIINQFDGL-YEYDNK-QKCVIWKIPLIDDSNRQ 480
Query: 584 GGCDVNI 590
G + ++
Sbjct: 481 GSMEFSV 487
>ASPGD|ASPL0000062974 [details] [associations]
symbol:AN0922 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0051645 "Golgi localization"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0048313 "Golgi inheritance"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
EMBL:BN001308 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACD01000014 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OrthoDB:EOG41VPBJ
RefSeq:XP_658526.1 STRING:Q5BEV8 EnsemblFungi:CADANIAT00001733
GeneID:2876697 KEGG:ani:AN0922.2 OMA:KETINAE Uniprot:Q5BEV8
Length = 516
Score = 463 (168.0 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 85/167 (50%), Positives = 129/167 (77%)
Query: 67 CRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLL 126
C G A++SRQF E+ R+R+E LLA+FPKL SG QHT VE D+VR+VYQPL++LY++L
Sbjct: 9 CTRGGKAVLSRQFREIARSRVEALLASFPKLADSGTQHTTVEQDNVRFVYQPLDELYIVL 68
Query: 127 ITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLA 186
IT + SNIL+D+++L LF++V C++LDE E+ NAF L+ A+DE+V LGYRE+++L+
Sbjct: 69 ITNRQSNILQDIDSLHLFAQVTTSICKSLDEREILRNAFELLSAYDELVTLGYRENLSLS 128
Query: 187 QVRTFVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAK 230
Q++TF+EM+SHEE++ + + + EA + + KAK+L+ QR E+A+
Sbjct: 129 QIKTFLEMESHEERIQEIIERNKELEASEERKRKAKQLEMQRKEAAR 175
Score = 237 (88.5 bits), Expect = 4.2e-67, Sum P(2) = 4.2e-67
Identities = 56/144 (38%), Positives = 81/144 (56%)
Query: 470 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKV-LLANKDTRGIQMQTHPN 528
IH+ E + S+ R+G +++FE+ G L LRISD + ++++ LLAN T G Q +THPN
Sbjct: 280 IHITIAETISASLTRDGALKSFEVKGDLQLRISDPAFTKLRLDLLANP-THGAQFRTHPN 338
Query: 529 VDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFT---STDESCLPLSINCWPSDNGSGG 585
VDK F + + I LK+ SK FP NN IGVL+WR S + LP++ W + GS
Sbjct: 339 VDKAAFSNSSIIQLKDTSKRFPANNSIGVLRWRVAGSGSDNADVLPITFTVW-LNKGSDS 397
Query: 586 CDVNIXXXXXXXXXXLNQVTISIP 609
V + L V ++IP
Sbjct: 398 TTVTVEYELTGSDS-LRDVVVTIP 420
Score = 177 (67.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 28/56 (50%), Positives = 47/56 (83%)
Query: 4 CRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
C++LDE E+ NAF L+ A+DE+V LGYRE+++L+Q++TF+EM+SHEE++ + + +
Sbjct: 94 CKSLDEREILRNAFELLSAYDELVTLGYRENLSLSQIKTFLEMESHEERIQEIIER 149
Score = 71 (30.1 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 422 IHLRQEEQLIISVGRNGGIETFELHGLLTLRISDEKY 458
IH+ E + S+ R+G +++FE+ G L LRISD +
Sbjct: 280 IHITIAETISASLTRDGALKSFEVKGDLQLRISDPAF 316
>CGD|CAL0000185 [details] [associations]
symbol:RET2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0051645 "Golgi localization" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0048313 "Golgi inheritance" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 CGD:CAL0000185 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:NOG309668 PANTHER:PTHR10121 RefSeq:XP_720546.1
RefSeq:XP_720673.1 ProteinModelPortal:Q5AGE3 STRING:Q5AGE3
GeneID:3637630 GeneID:3637714 KEGG:cal:CaO19.11711
KEGG:cal:CaO19.4236 Uniprot:Q5AGE3
Length = 573
Score = 444 (161.4 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 111/312 (35%), Positives = 183/312 (58%)
Query: 67 CRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMS-SGKQHTFVETDSVRYVYQPLEKLYML 125
C G A++SRQF +++R RI LLA FP L+S S QHT VE ++VRYVYQPLE+ Y++
Sbjct: 9 CTRGGKALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQPLEEFYIV 68
Query: 126 LITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNL 185
LIT KTSNIL+D++TL LF+ + R +DE E+ +++F +I AFDE+++LGY+E++ L
Sbjct: 69 LITNKTSNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEIIDAFDEVISLGYKENLTL 128
Query: 186 AQVRTFVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAKKFPKMGSGV--G 240
QV+TF+EMDSHEEK+ + + + EA + + +AKE++R+ M + K ++ SG G
Sbjct: 129 TQVQTFLEMDSHEEKIQEIIERNKELEATEERKRRAKEIQRKEM-ARKTMDQLHSGASAG 187
Query: 241 VGSNPY-FGXXXXXXXPV---TPVLESADISIRSSYIAQTVQREKKFRD--IRIG-RKSL 293
VG++ + + P TPV+E+ + ++ + T K R +++G +K+
Sbjct: 188 VGTSSFGYDSYQNNHQPTYKPTPVVETTHSAGSNTTSSSTHSLLSKPRGGGLQLGGKKTT 247
Query: 294 ENESYPLRIKIAQAILW--KPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKV 351
+ P + +L +P + KA S++ V + +KS PA S
Sbjct: 248 AGRTLPSGNGAHEPLLATNQPVFAHKAAVESSQT-SVAAGSSGVKSGSVSRTGSPAPSNA 306
Query: 352 STLSSKIPTTNI 363
+ ++++P I
Sbjct: 307 A--ATRVPNNGI 316
Score = 190 (71.9 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 43/118 (36%), Positives = 66/118 (55%)
Query: 476 EQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELFK 535
E++ + R+G I + E+ G L LRI+ + K+LL + Q +THPNVD+ LF+
Sbjct: 322 EKVSAQLSRDGSISSSEVKGDLQLRINQTELANAKILLKIAGDKK-QFKTHPNVDRNLFQ 380
Query: 536 SKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCWPSDNGSGGCDVNI 590
S++ I +K+ SK FP N+ +GVL+WR D S +P+ W S N G V +
Sbjct: 381 SESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSINEEGQAQVTV 438
Score = 171 (65.3 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 44/129 (34%), Positives = 75/129 (58%)
Query: 5 RTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKVCYLS 64
R +DE E+ +++F +I AFDE+++LGY+E++ L QV+TF+EMDSHEEK+ + + + L
Sbjct: 96 RNIDEREIFESSFEIIDAFDEVISLGYKENLTLTQVQTFLEMDSHEEKIQEIIERNKELE 155
Query: 65 RTC-RSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLY 123
T R + R+ EM R ++ L + S+G + DS + +QP K
Sbjct: 156 ATEERKRRAKEIQRK--EMARKTMDQLHSG----ASAGVGTSSFGYDSYQNNHQPTYKPT 209
Query: 124 MLLITTKTS 132
++ TT ++
Sbjct: 210 PVVETTHSA 218
Score = 44 (20.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 428 EQLIISVGRNGGIETFELHGLLTLRIS 454
E++ + R+G I + E+ G L LRI+
Sbjct: 322 EKVSAQLSRDGSISSSEVKGDLQLRIN 348
>UNIPROTKB|Q5AGE3 [details] [associations]
symbol:RET2 "Putative uncharacterized protein RET2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
CGD:CAL0000185 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AACQ01000021 EMBL:AACQ01000022 eggNOG:NOG309668
PANTHER:PTHR10121 RefSeq:XP_720546.1 RefSeq:XP_720673.1
ProteinModelPortal:Q5AGE3 STRING:Q5AGE3 GeneID:3637630
GeneID:3637714 KEGG:cal:CaO19.11711 KEGG:cal:CaO19.4236
Uniprot:Q5AGE3
Length = 573
Score = 444 (161.4 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 111/312 (35%), Positives = 183/312 (58%)
Query: 67 CRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMS-SGKQHTFVETDSVRYVYQPLEKLYML 125
C G A++SRQF +++R RI LLA FP L+S S QHT VE ++VRYVYQPLE+ Y++
Sbjct: 9 CTRGGKALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQPLEEFYIV 68
Query: 126 LITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNL 185
LIT KTSNIL+D++TL LF+ + R +DE E+ +++F +I AFDE+++LGY+E++ L
Sbjct: 69 LITNKTSNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEIIDAFDEVISLGYKENLTL 128
Query: 186 AQVRTFVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAKKFPKMGSGV--G 240
QV+TF+EMDSHEEK+ + + + EA + + +AKE++R+ M + K ++ SG G
Sbjct: 129 TQVQTFLEMDSHEEKIQEIIERNKELEATEERKRRAKEIQRKEM-ARKTMDQLHSGASAG 187
Query: 241 VGSNPY-FGXXXXXXXPV---TPVLESADISIRSSYIAQTVQREKKFRD--IRIG-RKSL 293
VG++ + + P TPV+E+ + ++ + T K R +++G +K+
Sbjct: 188 VGTSSFGYDSYQNNHQPTYKPTPVVETTHSAGSNTTSSSTHSLLSKPRGGGLQLGGKKTT 247
Query: 294 ENESYPLRIKIAQAILW--KPAVSAKAMKLGSKSHDVESFVDQLKSEGEKVISGPALSKV 351
+ P + +L +P + KA S++ V + +KS PA S
Sbjct: 248 AGRTLPSGNGAHEPLLATNQPVFAHKAAVESSQT-SVAAGSSGVKSGSVSRTGSPAPSNA 306
Query: 352 STLSSKIPTTNI 363
+ ++++P I
Sbjct: 307 A--ATRVPNNGI 316
Score = 190 (71.9 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 43/118 (36%), Positives = 66/118 (55%)
Query: 476 EQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELFK 535
E++ + R+G I + E+ G L LRI+ + K+LL + Q +THPNVD+ LF+
Sbjct: 322 EKVSAQLSRDGSISSSEVKGDLQLRINQTELANAKILLKIAGDKK-QFKTHPNVDRNLFQ 380
Query: 536 SKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCWPSDNGSGGCDVNI 590
S++ I +K+ SK FP N+ +GVL+WR D S +P+ W S N G V +
Sbjct: 381 SESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSINEEGQAQVTV 438
Score = 171 (65.3 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 44/129 (34%), Positives = 75/129 (58%)
Query: 5 RTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRKVCYLS 64
R +DE E+ +++F +I AFDE+++LGY+E++ L QV+TF+EMDSHEEK+ + + + L
Sbjct: 96 RNIDEREIFESSFEIIDAFDEVISLGYKENLTLTQVQTFLEMDSHEEKIQEIIERNKELE 155
Query: 65 RTC-RSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLY 123
T R + R+ EM R ++ L + S+G + DS + +QP K
Sbjct: 156 ATEERKRRAKEIQRK--EMARKTMDQLHSG----ASAGVGTSSFGYDSYQNNHQPTYKPT 209
Query: 124 MLLITTKTS 132
++ TT ++
Sbjct: 210 PVVETTHSA 218
Score = 44 (20.5 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 428 EQLIISVGRNGGIETFELHGLLTLRIS 454
E++ + R+G I + E+ G L LRI+
Sbjct: 322 EKVSAQLSRDGSISSSEVKGDLQLRIN 348
>SGD|S000001947 [details] [associations]
symbol:RET2 "Delta subunit of the coatomer complex (COPI)"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA;IMP] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS;IMP] [GO:0048313 "Golgi inheritance" evidence=IGI]
[GO:0051645 "Golgi localization" evidence=IGI] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 SGD:S000001947
GO:GO:0006886 EMBL:D50617 EMBL:BK006940 GO:GO:0051645 GO:GO:0006888
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 OrthoDB:EOG41VPBJ PIR:S56306
RefSeq:NP_116709.3 RefSeq:NP_116711.3 ProteinModelPortal:P43621
SMR:P43621 DIP:DIP-5255N IntAct:P43621 MINT:MINT-548122
STRING:P43621 PaxDb:P43621 PeptideAtlas:P43621 EnsemblFungi:YFR051C
GeneID:850612 GeneID:850614 KEGG:sce:YFR051C KEGG:sce:YFR053C
KO:K00844 NextBio:966502 Genevestigator:P43621 GermOnline:YFR051C
GO:GO:0048313 Uniprot:P43621
Length = 546
Score = 344 (126.2 bits), Expect = 5.0e-45, Sum P(2) = 5.0e-45
Identities = 73/190 (38%), Positives = 119/190 (62%)
Query: 64 SRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSS-GKQHTFVETDSVRYVYQPLEKL 122
S T R G ++SRQF ++++ R+ LL+ F L+S HTFVE VRYVY+P +
Sbjct: 7 SITTRQ-GKPLLSRQFKDLSKDRVLELLSNFQNLVSEISSDHTFVEDKHVRYVYRPFDNY 65
Query: 123 YMLLITTKTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALG-YRE 181
Y++LIT + SNI++DL TL LFS+ I Y + + E+ NAF ++ +FDEIV++G Y+E
Sbjct: 66 YIILITNRQSNIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEILSSFDEIVSMGGYKE 125
Query: 182 SVNLAQVRTFVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAKKFPKMGSG 238
+++ QV+T++ M+SHEE++ + + + EA + + +AKE+ R+ E F +G
Sbjct: 126 NLSFTQVQTYLSMESHEERIQEIIERNKEIEATEERKRRAKEIARKEHERKHGFMS-SNG 184
Query: 239 VGVGSNPYFG 248
G+N + G
Sbjct: 185 DYDGANRFMG 194
Score = 193 (73.0 bits), Expect = 5.0e-45, Sum P(2) = 5.0e-45
Identities = 52/143 (36%), Positives = 76/143 (53%)
Query: 475 EEQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANK-DTR--GIQMQTHPNVDK 531
+E + R+G I + EL G+L LRI+D + LA+ D R Q +THPN+DK
Sbjct: 296 KEVINAEFSRDGTIHSSELKGVLELRINDHDLSHSNLKLADSIDVRDKSFQFKTHPNIDK 355
Query: 532 ELFKSKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCWPSDNGSG-GCD 587
+ F S I L++ SK FP N+ +GVL+WR + D+S +PL++ W S + S G D
Sbjct: 356 QSFLSTKLISLRDKSKAFPANDQSLGVLRWRKVAPAEDDSLIPLTLTTWVSPSESQQGFD 415
Query: 588 VNIXXXXXXXXXXLNQVTISIPL 610
V I L V +IP+
Sbjct: 416 V-IIEYESVLETELADVIFTIPV 437
Score = 132 (51.5 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 21/58 (36%), Positives = 42/58 (72%)
Query: 3 YCRTLDENEVTDNAFSLIFAFDEIVALG-YRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
Y + + E+ NAF ++ +FDEIV++G Y+E+++ QV+T++ M+SHEE++ + + +
Sbjct: 94 YLSSFQDQEIFHNAFEILSSFDEIVSMGGYKENLSFTQVQTYLSMESHEERIQEIIER 151
Score = 52 (23.4 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 427 EEQLIISVGRNGGIETFELHGLLTLRISD 455
+E + R+G I + EL G+L LRI+D
Sbjct: 296 KEVINAEFSRDGTIHSSELKGVLELRIND 324
>GENEDB_PFALCIPARUM|PF11_0359 [details] [associations]
symbol:PF11_0359 "coatomer delta subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737
GO:GO:0006886 GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890
EMBL:AE014186 PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 334 (122.6 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 65/162 (40%), Positives = 108/162 (66%)
Query: 74 IVSRQFVEMTRARIEGLLAAFPKLMSSGKQ-HTFVETDSVRYVYQPLEKLYMLLITTKTS 132
+VSRQF +++ ++ L F L+ + HT++ETD VRYVYQPL+ +Y+ LIT S
Sbjct: 15 LVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQPLDNIYIFLITNINS 74
Query: 133 NILEDLETLRLFSRVIPEYCR-TLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTF 191
NI+EDLE +++ S++I + C+ ++E+ + F++IF DE++ G RE VN Q++T+
Sbjct: 75 NIIEDLEIIKVLSQIIQDICQGNINESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTY 134
Query: 192 VEMDSHEEKVYQAVRK-REAENKMREK--AKELKRQRMESAK 230
+EM+SHEEK+ +R+ +E E K R K A +L++ R + +K
Sbjct: 135 IEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQSK 176
Score = 156 (60.0 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 476 EQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELFK 535
E +I ++ G + ++ G L+I++ Y ++ V L N+ + + + HP +DK +
Sbjct: 260 ENIICTLSSEGTLCDLDIQGTFNLQINNHNYSKVIVELDNEYSE--KAKIHPILDKNKYN 317
Query: 536 SKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWP-SDNGS 583
S + LK+ SK F +N +LKW+ ++S +PL+I+CWP DN S
Sbjct: 318 SNI-LELKDKSKNFRINTIYPLLKWKINHINDSYIPLNISCWPCEDNES 365
Score = 126 (49.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 2 EYCR-TLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
+ C+ ++E+ + F++IF DE++ G RE VN Q++T++EM+SHEEK+ +R+
Sbjct: 92 DICQGNINESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTYIEMESHEEKLQTIIRE 150
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 515 NKDTR-GIQMQTHPNVDKELFKSKTEIGLKNPS--KPFPLNNDIGVLK 559
N+ T ++++ N + EL + L PS KP ++ND G+++
Sbjct: 363 NESTLLSLEIENKRNNNDELIYD-LNVNLMCPSAHKPQIISNDKGIIE 409
>UNIPROTKB|Q8II16 [details] [associations]
symbol:PF11_0359 "Coatomer delta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737 GO:GO:0006886
GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890 EMBL:AE014186
PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 334 (122.6 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 65/162 (40%), Positives = 108/162 (66%)
Query: 74 IVSRQFVEMTRARIEGLLAAFPKLMSSGKQ-HTFVETDSVRYVYQPLEKLYMLLITTKTS 132
+VSRQF +++ ++ L F L+ + HT++ETD VRYVYQPL+ +Y+ LIT S
Sbjct: 15 LVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQPLDNIYIFLITNINS 74
Query: 133 NILEDLETLRLFSRVIPEYCR-TLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTF 191
NI+EDLE +++ S++I + C+ ++E+ + F++IF DE++ G RE VN Q++T+
Sbjct: 75 NIIEDLEIIKVLSQIIQDICQGNINESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTY 134
Query: 192 VEMDSHEEKVYQAVRK-REAENKMREK--AKELKRQRMESAK 230
+EM+SHEEK+ +R+ +E E K R K A +L++ R + +K
Sbjct: 135 IEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQSK 176
Score = 156 (60.0 bits), Expect = 1.0e-40, Sum P(2) = 1.0e-40
Identities = 34/109 (31%), Positives = 61/109 (55%)
Query: 476 EQLIISVGRNGGIETFELHGLLTLRISDEKYGRIKVLLANKDTRGIQMQTHPNVDKELFK 535
E +I ++ G + ++ G L+I++ Y ++ V L N+ + + + HP +DK +
Sbjct: 260 ENIICTLSSEGTLCDLDIQGTFNLQINNHNYSKVIVELDNEYSE--KAKIHPILDKNKYN 317
Query: 536 SKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWP-SDNGS 583
S + LK+ SK F +N +LKW+ ++S +PL+I+CWP DN S
Sbjct: 318 SNI-LELKDKSKNFRINTIYPLLKWKINHINDSYIPLNISCWPCEDNES 365
Score = 126 (49.4 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 2 EYCR-TLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
+ C+ ++E+ + F++IF DE++ G RE VN Q++T++EM+SHEEK+ +R+
Sbjct: 92 DICQGNINESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTYIEMESHEEKLQTIIRE 150
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 515 NKDTR-GIQMQTHPNVDKELFKSKTEIGLKNPS--KPFPLNNDIGVLK 559
N+ T ++++ N + EL + L PS KP ++ND G+++
Sbjct: 363 NESTLLSLEIENKRNNNDELIYD-LNVNLMCPSAHKPQIISNDKGIIE 409
>POMBASE|SPCC285.08 [details] [associations]
symbol:ret2 "coatomer delta subunit Ret2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] InterPro:IPR011012
InterPro:IPR027059 PomBase:SPCC285.08 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006888
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0006890 eggNOG:NOG309668 PANTHER:PTHR10121 PIR:T41254
RefSeq:NP_588336.1 ProteinModelPortal:O74496 STRING:O74496
EnsemblFungi:SPCC285.08.1 GeneID:2538953 KEGG:spo:SPCC285.08
OMA:YLEMESH OrthoDB:EOG41VPBJ NextBio:20800128 Uniprot:O74496
Length = 240
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 78/164 (47%), Positives = 123/164 (75%)
Query: 71 GIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTK 130
G AI+SRQF EM+R R+E LL++FP L+S Q+T VE+D+VR+VYQPL++LY++LIT
Sbjct: 13 GKAIISRQFREMSRVRVESLLSSFPALVSEKSQNTTVESDNVRFVYQPLDELYIVLITNL 72
Query: 131 TSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRT 190
SNIL+D++TL L S+V+ C +L+E E+ + AF + AFDE +LGYR++V+L Q++T
Sbjct: 73 QSNILQDIDTLHLLSQVVTSICSSLEEREILEYAFEIFTAFDEATSLGYRDNVSLTQIKT 132
Query: 191 FVEMDSHEEKVYQAVRKR---EAENKMREKAKELKRQRMESAKK 231
++EM+SHEEK+ + V + EA + + + K+L+ Q+ E+A++
Sbjct: 133 YLEMESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAARR 176
Score = 158 (60.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 26/56 (46%), Positives = 43/56 (76%)
Query: 4 CRTLDENEVTDNAFSLIFAFDEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 59
C +L+E E+ + AF + AFDE +LGYR++V+L Q++T++EM+SHEEK+ + V +
Sbjct: 94 CSSLEEREILEYAFEIFTAFDEATSLGYRDNVSLTQIKTYLEMESHEEKIQEIVSR 149
>UNIPROTKB|E9PK34 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR027059 PANTHER:PTHR10121 EMBL:AP000941 HGNC:HGNC:649
ChiTaRS:ARCN1 IPI:IPI00984360 ProteinModelPortal:E9PK34
Ensembl:ENST00000534182 ArrayExpress:E9PK34 Bgee:E9PK34
Uniprot:E9PK34
Length = 83
Score = 195 (73.7 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 39/54 (72%), Positives = 44/54 (81%)
Query: 60 VCYLSRTCRSIGIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVR 113
V + C G AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+S+R
Sbjct: 2 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESIR 55
>ASPGD|ASPL0000077433 [details] [associations]
symbol:AN8795 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0060237 "regulation of
fungal-type cell wall organization" evidence=IEA] [GO:0032889
"regulation of vacuole fusion, non-autophagic" evidence=IEA]
[GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0032153
"cell division site" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030121 "AP-1
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192 EMBL:BN001303
GO:GO:0030131 HOGENOM:HOG000173247 OMA:IVGSVKM InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EnsemblFungi:CADANIAT00006267 Uniprot:C8V9P3
Length = 446
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 35/140 (25%), Positives = 69/140 (49%)
Query: 94 FPKLMSSGKQHTFV-----ETDSVRYVYQPLEKLYMLLITTKTSNILEDLETLRLFSRVI 148
FP L+S ++ + + + Y+Y LY+L +T K +N E L L V
Sbjct: 32 FPILLSDAEEESSAVPPCFSHEGINYLYIRHSNLYILALTKKNTNATEILLFLHKIVEVF 91
Query: 149 PEYCRTLDENEVTDNAFSLIFAF-DEIVALGYRESVNLAQVRTFVEMDSHEEKVYQAVRK 207
EY + L+E + DN F +I+ DE++ GY ++ ++ ++ +SH+ +V QA
Sbjct: 92 TEYFKVLEEESIRDN-FVIIYELLDEMMDFGYPQTTESKILQEYITQESHKLEV-QARPP 149
Query: 208 REAENKMREKAKELKRQRME 227
N + +++ ++ ++ E
Sbjct: 150 IAVTNAVSWRSEGIRYRKNE 169
>WB|WBGene00000150 [details] [associations]
symbol:apm-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0040007 GO:GO:0040010
GO:GO:0006886 GO:GO:0002119 GO:GO:0016192 GO:GO:0040011
GO:GO:0009306 GO:GO:0030131 eggNOG:NOG315786
GeneTree:ENSGT00530000062779 HOGENOM:HOG000173247 KO:K12393
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:FO080647 PIR:T15189 RefSeq:NP_491572.2 HSSP:Q96CW1
ProteinModelPortal:O01755 SMR:O01755 STRING:O01755 PaxDb:O01755
EnsemblMetazoa:F55A12.7 GeneID:172180 KEGG:cel:CELE_F55A12.7
UCSC:F55A12.7 CTD:172180 WormBase:F55A12.7 InParanoid:O01755
OMA:REYIMRS NextBio:874351 Uniprot:O01755
Length = 426
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 37/160 (23%), Positives = 74/160 (46%)
Query: 71 GIAIVSRQFV-EMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITT 129
G ++SR + ++ + IE + + G + + Y Y +Y++ I+
Sbjct: 13 GNVVISRNYRGDVDMSCIEKFMPLLVEKEDEGSASPVLVHQGISYTYIKYMNVYLVTISK 72
Query: 130 KTSNILEDLETLRLFSRVIPEYCRTLDENEVTDNAFSLIFA-FDEIVALGYRESVNLAQV 188
K +N++ L L V EY +TL+E V DN F +I+ FDE++ GY ++ +
Sbjct: 73 KNTNVILVLSALYKIVEVFCEYFKTLEEEAVRDN-FVIIYELFDEMLDFGYPQTTESKIL 131
Query: 189 RTFVEMDSHEEKVYQAVRKREA-ENKMREKAKELKRQRME 227
+ F+ + + VR A N + +++ +K ++ E
Sbjct: 132 QEFITQQGNR---LETVRPPMAVTNAVSWRSEGIKYRKNE 168
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 611 594 0.00084 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 609 (65 KB)
Total size of DFA: 284 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.48u 0.14s 55.62t Elapsed: 00:00:03
Total cpu time: 55.48u 0.14s 55.62t Elapsed: 00:00:03
Start: Thu Aug 15 14:50:56 2013 End: Thu Aug 15 14:50:59 2013