BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12906
(303 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195442870|ref|XP_002069169.1| GK24430 [Drosophila willistoni]
gi|194165254|gb|EDW80155.1| GK24430 [Drosophila willistoni]
Length = 315
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 186/303 (61%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGCT +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDAYNSHLEECIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL+S + QQ + ELKR+L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKSELTDQQ--------------LTINELKRELQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSALPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GL+SLETRQNNRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLASLETRQNNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGDVDEELTCPICSGVLEDPLQAVMC 34
>gi|194873145|ref|XP_001973148.1| GG15934 [Drosophila erecta]
gi|195327897|ref|XP_002030653.1| GM25563 [Drosophila sechellia]
gi|195477914|ref|XP_002086432.1| GE22867 [Drosophila yakuba]
gi|190654931|gb|EDV52174.1| GG15934 [Drosophila erecta]
gi|194119596|gb|EDW41639.1| GM25563 [Drosophila sechellia]
gi|194186222|gb|EDW99833.1| GE22867 [Drosophila yakuba]
Length = 315
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 185/303 (61%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGCT +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDAYNSHLEECIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL+S + QQ + ELKR+L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKSELTDQQ--------------LTINELKRELQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GLSSLETRQ NRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLSSLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|24664887|ref|NP_648816.1| early girl, isoform A [Drosophila melanogaster]
gi|442632623|ref|NP_001261904.1| early girl, isoform B [Drosophila melanogaster]
gi|7294214|gb|AAF49566.1| early girl, isoform A [Drosophila melanogaster]
gi|15292173|gb|AAK93355.1| LD41235p [Drosophila melanogaster]
gi|220946208|gb|ACL85647.1| CG17033-PA [synthetic construct]
gi|220955906|gb|ACL90496.1| CG17033-PA [synthetic construct]
gi|440215850|gb|AGB94597.1| early girl, isoform B [Drosophila melanogaster]
Length = 315
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/303 (50%), Positives = 185/303 (61%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGCT +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDAYNSHLDECIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL+S + QQ + ELKR+L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKSELTDQQ--------------LTINELKRELQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GLSSLETRQ NRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLSSLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|125978799|ref|XP_001353432.1| GA14285 [Drosophila pseudoobscura pseudoobscura]
gi|195160735|ref|XP_002021229.1| GL25216 [Drosophila persimilis]
gi|54642192|gb|EAL30941.1| GA14285 [Drosophila pseudoobscura pseudoobscura]
gi|194118342|gb|EDW40385.1| GL25216 [Drosophila persimilis]
Length = 315
Score = 286 bits (732), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 153/303 (50%), Positives = 185/303 (61%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGCT +KLD Y+SHL +C HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDVYNSHLEDCIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL+S + QQ + ELKR+L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKSELTDQQ--------------LTINELKRELQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSALPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GLSSLETRQNNRR Y+NY+C+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLSSLETRQNNRRIYDNYICRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|194749821|ref|XP_001957335.1| GF24099 [Drosophila ananassae]
gi|190624617|gb|EDV40141.1| GF24099 [Drosophila ananassae]
Length = 315
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/303 (50%), Positives = 185/303 (61%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGC+ +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCSSVLKLDAYNSHLEECIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL++ + QQ + ELKR+L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKTEITDQQ--------------LTINELKRELQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GLSSLETRQ NRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLSSLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|91078878|ref|XP_972869.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270003710|gb|EFA00158.1| hypothetical protein TcasGA2_TC002979 [Tribolium castaneum]
Length = 315
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/192 (67%), Positives = 158/192 (82%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L+DHNCVKELR+++ QQQKM + + E++EQRF + E KR++ +L+E MRAM++S
Sbjct: 124 IPKDELKDHNCVKELRALIQTQQQKMNDFQQEITEQRFLINEQKREMQLLKEFMRAMRIS 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R +A+ MERD+V RWSN L RARVTRWGGMISTPD +LQ MI+R+L E GCP HIL
Sbjct: 184 NPSMRAIADAMERDEVLRWSNFLQRARVTRWGGMISTPDEVLQRMIRRTLTEMGCPNHIL 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
D LM N HER WP GLSSLETRQNNRRQYENYVCKR+P KQAV+VL CDN H+ EDM+
Sbjct: 244 DDLMENCHERRWPPGLSSLETRQNNRRQYENYVCKRVPGKQAVLVLACDNTHMGEDMMVE 303
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 PGLVMIFAHGIE 315
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I RF G+VDEEL+C ICSGV E+PLQ C
Sbjct: 1 MGFDINRFQGDVDEELVCPICSGVLEDPLQAPVC 34
>gi|195495362|ref|XP_002095234.1| GE22283 [Drosophila yakuba]
gi|194181335|gb|EDW94946.1| GE22283 [Drosophila yakuba]
Length = 315
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 183/303 (60%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA YGCT +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDAYNSHLEECIHNPKRPFPCEKGCGFDIPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL ++L T MG
Sbjct: 131 ----DHNCVREL------RTLIVKQTEKMG------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
EL+S + QQ + ++ E L + ++ MRAM+VSNP +R +A+
Sbjct: 151 ----ELKSELTDQQLTINELKRE--------------LQLFKDFMRAMRVSNPAMRAIAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM HE
Sbjct: 193 QMERDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDSLMEFCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP+GLSSLETRQ NRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++ PGLVMIFAH
Sbjct: 253 RRWPRGLSSLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMIDPGLVMIFAH 312
Query: 301 GIE 303
GIE
Sbjct: 313 GIE 315
>gi|383866131|ref|XP_003708525.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 2
[Megachile rotundata]
Length = 321
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+I+H QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 135 LKDHNCVRELRNIIHSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 194
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 195 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 254
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 255 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLYCDNTHMPEDMMVEPGLVM 314
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 315 IFAHGIE 321
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN YGC V VKLDS SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 85 LCISCDNIMYGCQVVVKLDSLVSHLEQCEYNPKRPMLCEQGCSLIIPKNELK 136
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHN 121
MG+++ RF GEVDEEL+C ICSGV E+P+Q N
Sbjct: 1 MGFDVNRFQGEVDEELVCPICSGVLEDPVQVSN 33
>gi|328793734|ref|XP_395055.3| PREDICTED: e3 ubiquitin-protein ligase NRDP1 isoform 1 [Apis
mellifera]
Length = 321
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+I+H QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 135 LKDHNCVRELRNIIHSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 194
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 195 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 254
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 255 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLYCDNTHMPEDMMVEPGLVM 314
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 315 IFAHGIE 321
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN YGC V VKLDS SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 85 LCISCDNIMYGCQVIVKLDSLVSHLEQCEYNPKRPMLCEQGCSLIIPKNELK 136
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHN 121
MG+++ RF GEVDEEL+C ICSGV E+P+Q +N
Sbjct: 1 MGFDVNRFQGEVDEELVCPICSGVLEDPVQVNN 33
>gi|328793732|ref|XP_003251921.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1 [Apis mellifera]
gi|340716001|ref|XP_003396493.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Bombus
terrestris]
gi|350408644|ref|XP_003488469.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Bombus
impatiens]
Length = 315
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+I+H QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 129 LKDHNCVRELRNIIHSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 189 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 249 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLYCDNTHMPEDMMVEPGLVM 308
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 309 IFAHGIE 315
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN YGC V VKLDS SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 79 LCISCDNIMYGCQVIVKLDSLVSHLEQCEYNPKRPMLCEQGCSLIIPKNELK 130
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ RF GEVDEEL+C ICSGV E+P+Q C
Sbjct: 1 MGFDVNRFQGEVDEELVCPICSGVLEDPVQAPVC 34
>gi|383866129|ref|XP_003708524.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1
[Megachile rotundata]
Length = 315
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+I+H QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 129 LKDHNCVRELRNIIHSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 189 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 249 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLYCDNTHMPEDMMVEPGLVM 308
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 309 IFAHGIE 315
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN YGC V VKLDS SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 79 LCISCDNIMYGCQVVVKLDSLVSHLEQCEYNPKRPMLCEQGCSLIIPKNELK 130
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ RF GEVDEEL+C ICSGV E+P+Q C
Sbjct: 1 MGFDVNRFQGEVDEELVCPICSGVLEDPVQAPVC 34
>gi|380019725|ref|XP_003693753.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
NRDP1-like [Apis florea]
Length = 321
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+I+H QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 135 LKDHNCVRELRNIIHSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 194
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 195 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 254
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 255 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLYCDNTHMPEDMMVEPGLVM 314
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 315 IFAHGIE 321
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN YGC V VKLDS SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 85 LCISCDNIMYGCQVIVKLDSLVSHLEQCEYNPKRPMLCEQGCSLIIPXNELK 136
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHN 121
MG+++ RF GEVDEEL+C ICSGV E+P+Q +N
Sbjct: 1 MGFDVNRFQGEVDEELVCPICSGVLEDPVQVNN 33
>gi|170044497|ref|XP_001849882.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867622|gb|EDS31005.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 315
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/186 (68%), Positives = 155/186 (83%)
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRV 177
+DHNC +ELRS+VH QQQKM ++ E+++Q + ELKR+L ++++ MRAM+VSNP +R
Sbjct: 130 KDHNCFRELRSLVHNQQQKMSELKNEINDQNLVINELKRELNLVKDFMRAMRVSNPAMRA 189
Query: 178 LAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHN 237
+A+ MERD+V RWSN L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM N
Sbjct: 190 IADQMERDEVTRWSNGLARARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDDLMEN 249
Query: 238 SHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMI 297
HER WP+GLSSLETRQNNRR YENYVC+RIP KQAV+VL CDN H+ ED++ PGLVMI
Sbjct: 250 CHERRWPRGLSSLETRQNNRRIYENYVCRRIPGKQAVLVLHCDNTHMSEDVMVEPGLVMI 309
Query: 298 FAHGIE 303
FAHGIE
Sbjct: 310 FAHGIE 315
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISC+NA YGCT+ +KLD+ ++H+ ECEHNPKRP+ CE+GCG VIP DE K
Sbjct: 79 LNISCENAMYGCTLVLKLDTLATHIEECEHNPKRPLPCEKGCGFVIPKDEYK 130
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEELIC ICSGV EEPLQ C
Sbjct: 1 MGYDLTRFQGDVDEELICPICSGVLEEPLQAVAC 34
>gi|307204403|gb|EFN83132.1| E3 ubiquitin-protein ligase NRDP1 [Harpegnathos saltator]
Length = 315
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 157/187 (83%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+++ QQQKM +M+ E+SE + Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 129 LKDHNCVRELRNLIQSQQQKMADMKREISEHQLQINEHKREIHLLKDFMRALRVSNPTMR 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERDDV RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 189 AIADQMERDDVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GLSSLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 249 NCHERRWPPGLSSLETRQNSRRQYDNYVCKRVPGKQAVLVLHCDNTHMPEDMMVEPGLVM 308
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 309 IFAHGIE 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I CDN YGC+V VKLDS +SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 79 LSIKCDNVVYGCSVVVKLDSLASHLEQCEYNPKRPMLCEQGCSLIIPKNELK 130
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ RF G+VDEEL+C ICSGV E+ +Q C
Sbjct: 1 MGFDVNRFQGDVDEELVCPICSGVLEDAVQAPVC 34
>gi|332020405|gb|EGI60825.1| E3 ubiquitin-protein ligase NRDP1 [Acromyrmex echinatior]
Length = 321
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 158/187 (84%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+++ QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 135 LKDHNCVRELRNLIQSQQQKLSDMKRELDEQQLQINEHKREIHLLKDFMRALRVSNPAMR 194
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERDDV RWS SL RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 195 AIADQMERDDVVRWSASLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 254
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN+H+PEDM+ PGLVM
Sbjct: 255 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLHCDNMHMPEDMMVEPGLVM 314
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 315 IFAHGIE 321
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I CDN YGC + VKLD + HL +CE+NPKRP+QCEQGC +IP +ELK
Sbjct: 85 LCIKCDNIMYGCNMVVKLDCLAMHLEQCEYNPKRPMQCEQGCSLIIPKNELK 136
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNCVK 124
MG+++ RF G+VDEEL+C ICSGV E+P+Q N ++
Sbjct: 1 MGFDVNRFQGDVDEELVCPICSGVLEDPVQVSNVLQ 36
>gi|322780463|gb|EFZ09951.1| hypothetical protein SINV_15472 [Solenopsis invicta]
Length = 287
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 159/187 (85%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+++ +QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 101 LKDHNCVRELRNLISQQQQKLNDMKRELDEQQLQINEQKREIHLLKDFMRALRVSNPAMR 160
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERDDV RWS SL RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 161 AIADQMERDDVVRWSASLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 220
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN+H+PEDM+ PGLVM
Sbjct: 221 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLHCDNMHMPEDMMVEPGLVM 280
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 281 IFAHGIE 287
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I CDN YGCTV VKLD + HL +CE+NPKRP+QCEQGC +IP +ELK
Sbjct: 51 LCIKCDNIMYGCTVVVKLDCLAMHLEQCEYNPKRPMQCEQGCSLIIPKNELK 102
>gi|157118052|ref|XP_001658984.1| hypothetical protein AaeL_AAEL008184 [Aedes aegypti]
gi|108875836|gb|EAT40061.1| AAEL008184-PA [Aedes aegypti]
Length = 315
Score = 277 bits (708), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 154/186 (82%)
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRV 177
+DHNC +ELRS+VH QQQKM ++ E+++Q + ELKR+L ++++ MRAM+VSNP +R
Sbjct: 130 KDHNCFRELRSLVHNQQQKMSELKNEINDQNLVINELKRELNLVKDFMRAMRVSNPAMRA 189
Query: 178 LAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHN 237
+A+ MERD+V RW N L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM N
Sbjct: 190 IADQMERDEVTRWCNGLARARVTRWGGMISTPDEALQLMIKRALSESGCPPHILDDLMEN 249
Query: 238 SHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMI 297
HER WP+GLSSLETRQNNRR YENYVC+RIP KQAV+VL CDN H+ ED++ PGLVMI
Sbjct: 250 CHERRWPRGLSSLETRQNNRRIYENYVCRRIPGKQAVLVLHCDNTHMSEDVMVEPGLVMI 309
Query: 298 FAHGIE 303
FAHGIE
Sbjct: 310 FAHGIE 315
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISC+NA YGCT+ +KLD+ ++H+ ECEHNPKRP+ CE+GCG VIP DE K
Sbjct: 79 LNISCENAIYGCTLVLKLDTLATHIEECEHNPKRPLPCEKGCGFVIPKDEYK 130
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEELIC ICSGV EEPLQ C
Sbjct: 1 MGYDLTRFQGDVDEELICPICSGVLEEPLQAVAC 34
>gi|307167491|gb|EFN61064.1| E3 ubiquitin-protein ligase NRDP1 [Camponotus floridanus]
Length = 349
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 121/187 (64%), Positives = 157/187 (83%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L+DHNCV+ELR+++ QQQK+ +M+ E+ EQ+ Q+ E KR++ +L++ MRA++VSNP +R
Sbjct: 163 LKDHNCVRELRNLIQSQQQKLADMKRELGEQQLQINEHKREIHLLKDFMRALRVSNPAMR 222
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
+A+ MERD+V RWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP H++D+LM
Sbjct: 223 AIADQMERDEVVRWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCPPHVIDELME 282
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N HER WP GL+SLETRQN+RRQY+NYVCKR+P KQAV+VL CDN H+PEDM+ PGLVM
Sbjct: 283 NCHERKWPPGLNSLETRQNSRRQYDNYVCKRVPGKQAVLVLHCDNTHMPEDMMVEPGLVM 342
Query: 297 IFAHGIE 303
IFAHGIE
Sbjct: 343 IFAHGIE 349
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I+CDN YGC VKLDS +SHL +CE+NPKRP+ CEQGC +IP +ELK
Sbjct: 113 LCINCDNIVYGCNAIVKLDSLTSHLEQCEYNPKRPMLCEQGCSLIIPKNELK 164
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQD 119
MG+++ RF G+VDEEL+C ICSGV E+P+QD
Sbjct: 1 MGFDVNRFQGDVDEELVCPICSGVLEDPVQD 31
>gi|195019206|ref|XP_001984932.1| GH14771 [Drosophila grimshawi]
gi|193898414|gb|EDV97280.1| GH14771 [Drosophila grimshawi]
Length = 315
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 161/192 (83%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L+DHNCV+ELR+++ KQ ++M M+TE+ +++ + ELKR+L + ++ MRAM+VS
Sbjct: 124 IPKDELKDHNCVRELRTLIVKQTEQMNQMKTELVDEQLTINELKRELQLFKDFMRAMRVS 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R +A+ MERD+V RWS++L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HIL
Sbjct: 184 NPAMRAIADQMERDEVIRWSSALARARVTRWGGMISTPDDALQLMIKRALSESGCPPHIL 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
D LM N HER WP+GLSSLETRQNNRR Y+NYVC+RIP KQAV+VL CDNVH+ ED++
Sbjct: 244 DSLMENCHERRWPRGLSSLETRQNNRRIYDNYVCRRIPGKQAVLVLSCDNVHMTEDVMVE 303
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 PGLVMIFAHGIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|195377826|ref|XP_002047688.1| GJ13569 [Drosophila virilis]
gi|194154846|gb|EDW70030.1| GJ13569 [Drosophila virilis]
Length = 315
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 122/192 (63%), Positives = 162/192 (84%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L+DHNCV+ELR+++ KQ +++ ++TE+++Q+ + ELKR+L + ++ MRAM+VS
Sbjct: 124 IPKDELKDHNCVRELRALIVKQTEQIGQLKTEITDQQLTINELKRELQLFKDFMRAMRVS 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R +A+ MERD+V RWS++L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HIL
Sbjct: 184 NPAMRAIADQMERDEVIRWSSALARARVTRWGGMISTPDDALQLMIKRALSESGCPPHIL 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
D LM N HER WP+GLSSLETRQNNRR Y+NY+C+RIP KQAV+VL CDNVH+ ED++
Sbjct: 244 DSLMENCHERRWPRGLSSLETRQNNRRIYDNYICRRIPGKQAVLVLSCDNVHMTEDVMVE 303
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 PGLVMIFAHGIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|156555259|ref|XP_001600568.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1
[Nasonia vitripennis]
gi|345495060|ref|XP_003427426.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 2
[Nasonia vitripennis]
Length = 315
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 124/196 (63%), Positives = 161/196 (82%), Gaps = 1/196 (0%)
Query: 109 CSGVF-EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRA 167
CS + ++ +++HNCV+ELR+++ Q QK +M E+SEQ+FQ+ E KR++ +L++ MRA
Sbjct: 120 CSLIIPKDEMKNHNCVRELRNLIQSQHQKFTDMRRELSEQQFQLNEQKREIHLLKDFMRA 179
Query: 168 MKVSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCP 227
M+VSNP +R +A+ MERD+VARWS +L RARVTRWGGMISTPD +LQ MIKR+L+E CP
Sbjct: 180 MRVSNPIMRDIADQMERDEVARWSATLPRARVTRWGGMISTPDELLQTMIKRTLSEYNCP 239
Query: 228 GHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPED 287
H++++LM N HER WP GL+SLETRQN+RRQYENYVCKR+P KQAV+VL CDN H+PED
Sbjct: 240 PHVINELMENCHERKWPAGLNSLETRQNSRRQYENYVCKRVPGKQAVIVLHCDNTHMPED 299
Query: 288 MISAPGLVMIFAHGIE 303
M PGLVMIFAHGIE
Sbjct: 300 MTIEPGLVMIFAHGIE 315
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I CDN +GC VKLD+ +HL ECE+NPKRP+ CEQGC +IP DE+K
Sbjct: 79 LRIKCDNFVHGCQQDVKLDALMAHLEECEYNPKRPITCEQGCSLIIPKDEMK 130
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ RF G VDEELIC ICSGV ++P+Q +C
Sbjct: 1 MGFDVNRFQGSVDEELICPICSGVLQDPVQAPDC 34
>gi|195127736|ref|XP_002008324.1| GI11873 [Drosophila mojavensis]
gi|193919933|gb|EDW18800.1| GI11873 [Drosophila mojavensis]
Length = 315
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 161/192 (83%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L+DHNCV+ELR ++ KQ +++ ++TE+++Q+ + ELKR+L + ++ MRAM+VS
Sbjct: 124 IPKDELKDHNCVRELRVLIVKQTEQIGQLKTEITDQQLTINELKRELQLFKDFMRAMRVS 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R +A+ MERD+V RWS++L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HIL
Sbjct: 184 NPAMRAIADQMERDEVIRWSSALARARVTRWGGMISTPDDALQLMIKRALSESGCPPHIL 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
D LM N HER WP+GLSSLETRQNNRR Y+NYVC+RIP KQAV+VL CDNVH+ ED++
Sbjct: 244 DSLMENCHERRWPRGLSSLETRQNNRRIYDNYVCRRIPGKQAVLVLSCDNVHMTEDVMVE 303
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 PGLVMIFAHGIE 315
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|357625867|gb|EHJ76157.1| hypothetical protein KGM_16636 [Danaus plexippus]
Length = 315
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 125/192 (65%), Positives = 155/192 (80%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L +HNCV+ELR+++ QQ K+ + + E++EQR + E KR+L +L+E MRAM+VS
Sbjct: 124 IPKDELAEHNCVRELRALITSQQGKLTDYQQELAEQRLVINEHKRELALLKEFMRAMRVS 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R LA+ MERD+V RW+ SL+RARVTRWGGMISTPD +LQ MIKRSL+ESGCP HI+
Sbjct: 184 NPTMRALADQMERDEVVRWAGSLARARVTRWGGMISTPDDVLQMMIKRSLSESGCPPHII 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
D LM N HER WP GLSSLETRQNNRR YE YVCKR+P KQAV+VL CDN H+ E M+
Sbjct: 244 DDLMENCHERRWPPGLSSLETRQNNRRLYEKYVCKRVPGKQAVLVLQCDNTHVDEHMMVE 303
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 PGLVMIFAHGIE 315
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 38/51 (74%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L SCDN+ +GC +KLDS +SHL ECE NPKRP+ CE GCG VIP DEL
Sbjct: 79 LCTSCDNSPHGCNAVLKLDSLASHLVECEFNPKRPMPCEAGCGLVIPKDEL 129
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+EI RF G+VDEELIC ICSGV E+PLQ C
Sbjct: 1 MGFEIKRFQGDVDEELICPICSGVLEDPLQAPAC 34
>gi|321470741|gb|EFX81716.1| hypothetical protein DAPPUDRAFT_49933 [Daphnia pulex]
Length = 315
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/303 (48%), Positives = 182/303 (60%), Gaps = 66/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L ++CDN+ YGCT +KLD+ SH+ ECE NPKRPV CE GCG V+P DELK
Sbjct: 79 LSLTCDNSVYGCTAILKLDALESHVQECEFNPKRPVPCELGCGLVVPKDELK-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL +SL A + ++V EV E G F+
Sbjct: 131 ----EHNCVREL------RSLMQAQQS----KLVEVQAEVAE--------GKFQ------ 162
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
MSEQ KR+L +L++ M AM+ +NP +R+LA+
Sbjct: 163 -----------------------MSEQ-------KRELQLLKDYMLAMRNANPSLRILAD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
ME D+V RW+ +L +ARV RWGGMISTPD +LQAMIKR+L+ESGCP HI+ LM N+HE
Sbjct: 193 QMEADEVRRWAETLPKARVLRWGGMISTPDTVLQAMIKRALSESGCPPHIIQDLMENAHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R WP GLSSLE RQ NRRQYENYVC+RIP KQAV V+ CDN H+ DMI PGL+MIFAH
Sbjct: 253 RRWPTGLSSLEIRQLNRRQYENYVCRRIPGKQAVAVMACDNGHMNPDMILEPGLIMIFAH 312
Query: 301 GIE 303
G+E
Sbjct: 313 GVE 315
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG EI RF GEVDEEL+C ICS V E PLQ NC
Sbjct: 1 MGIEINRFQGEVDEELLCPICSSVLENPLQAPNC 34
>gi|118793972|ref|XP_321185.3| AGAP001882-PA [Anopheles gambiae str. PEST]
gi|116116068|gb|EAA01676.4| AGAP001882-PA [Anopheles gambiae str. PEST]
Length = 321
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 153/192 (79%), Gaps = 6/192 (3%)
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRV 177
+DHNC +ELRS+VH QQQKM ++ E+++Q + ELKR+L ++++ MRAM+VSNP +R
Sbjct: 130 KDHNCFRELRSLVHSQQQKMGELKNEINDQNLVINELKRELNLVKDFMRAMRVSNPAMRA 189
Query: 178 LAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHN 237
+A+ MERD+V RW N L+RARVTRWGGMISTPD LQ MIKR+L+ESGCP HILD LM N
Sbjct: 190 IADQMERDEVMRWCNGLARARVTRWGGMISTPDDALQLMIKRALSESGCPPHILDDLMEN 249
Query: 238 SHERNWPQGLSSLETRQNNRRQYENYVCKRIPSK------QAVVVLLCDNVHLPEDMISA 291
HER WP+GLSSLETRQNNRR YENY+C+R+P K AV+VL CDN H+ ED++
Sbjct: 250 CHERRWPRGLSSLETRQNNRRIYENYICRRVPGKCLFGESTAVLVLQCDNTHMNEDVMVE 309
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 310 PGLVMIFAHGIE 321
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEELIC ICSGV EEPLQ C
Sbjct: 1 MGYDLARFQGDVDEELICPICSGVLEEPLQAVAC 34
>gi|328701661|ref|XP_003241674.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Acyrthosiphon
pisum]
Length = 315
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 149/186 (80%)
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRV 177
+DHNCVKELR +V KQQQK+ M +M+ R++MT +K ++ +L+ +RA++V NP VR
Sbjct: 130 KDHNCVKELRELVQKQQQKINEMHQDMATYRYEMTGIKDEMRILKGYVRALRVCNPSVRA 189
Query: 178 LAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHN 237
+A+ +ERD++ RWS+SL +ARVTRWGGMISTPD LQ IK++L ESGCP HILD L+ N
Sbjct: 190 VADELERDEIERWSSSLPQARVTRWGGMISTPDEYLQNNIKQALIESGCPAHILDDLVKN 249
Query: 238 SHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMI 297
HERNWP GLSSLETRQ+NRR Y+ Y CKRIP KQAV+VL CDN+ + +DM+S PGL+MI
Sbjct: 250 CHERNWPSGLSSLETRQHNRRHYDRYNCKRIPGKQAVIVLPCDNIMVSDDMMSEPGLIMI 309
Query: 298 FAHGIE 303
FAHGIE
Sbjct: 310 FAHGIE 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I C+N++YGC VKLD+ SHL+ECE+NPKRP CEQGCG +IP DE K
Sbjct: 79 LYIVCENSNYGCQSVVKLDTLDSHLSECEYNPKRPFPCEQGCGLIIPKDEHK 130
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I+RF+GEVDEEL+C IC+GV ++P+Q C
Sbjct: 1 MGFDIIRFVGEVDEELLCPICTGVLQDPVQAPAC 34
>gi|72005437|ref|XP_780194.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 319
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/196 (57%), Positives = 150/196 (76%), Gaps = 4/196 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ ++DHNCV+ELR +V Q K+ ETE++E R Q++E +R++ +L+E +RA+++S
Sbjct: 124 IPKDEVKDHNCVRELRLLVQNQTNKLSEQETELTEIRSQLSEHRREMQMLKEYIRAIRIS 183
Query: 172 NP----GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCP 227
NP VR + + +E ++V RW NS+ ARVTRWGGMISTPDV+LQ +IKRSL ES CP
Sbjct: 184 NPNTSPSVRAIEDEIENNEVVRWVNSMPLARVTRWGGMISTPDVVLQTVIKRSLLESHCP 243
Query: 228 GHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPED 287
HI+ +LM N+HERNWP GLS+LETRQ NR YE YVC+RIPSKQAV+V+ CDN H+ ED
Sbjct: 244 AHIVAELMENAHERNWPPGLSTLETRQMNRHTYEQYVCRRIPSKQAVLVMACDNAHMGED 303
Query: 288 MISAPGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 FTLDPGLVMIFAHGIE 319
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF GEVDEELIC ICS V E+P Q C
Sbjct: 1 MGYEVTRFDGEVDEELICPICSAVLEDPQQAPEC 34
>gi|301610057|ref|XP_002934543.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 246
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 148/190 (77%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q++E KR + +L+ MRA++ +NP
Sbjct: 55 KDELPNHNCIKHLRSVVQQQQIRIGELEKAAAESKHQLSEQKRDIQLLKAYMRAIRSANP 114
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 115 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 174
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PG
Sbjct: 175 LIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPG 234
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 235 LVMIFAHGVE 244
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 8 LQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 58
>gi|195590587|ref|XP_002085026.1| GD14579 [Drosophila simulans]
gi|194197035|gb|EDX10611.1| GD14579 [Drosophila simulans]
Length = 314
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVN-METEMSEQRFQMTELKRQLTVLQELMRAMKV 170
+ ++ L+DHNCV+ELR+++ ++++ V+ + +Q TE + + +Q+ MRAM+V
Sbjct: 124 IPKDELKDHNCVRELRTLLSSRRKRWVSSIGAHRPAADYQRTEAR--ASAIQDFMRAMRV 181
Query: 171 SNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHI 230
SN +R +A+ MERD+V RWS++L RARVTRWGGMISTPD LQ MIKR+L+ESGCP HI
Sbjct: 182 SNHAMRAIADQMERDEVIRWSSTLPRARVTRWGGMISTPDDALQLMIKRALSESGCPPHI 241
Query: 231 LDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMIS 290
LD LM HER WP+GLSSLETRQ NRR Y+NYVC+RIP KQAV+VL CDN+H+ ED++
Sbjct: 242 LDSLMEFCHERRWPRGLSSLETRQTNRRIYDNYVCRRIPGKQAVLVLSCDNLHMTEDVMI 301
Query: 291 APGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 302 DPGLVMIFAHGIE 314
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I+CDNA YGCT +KLD+Y+SHL EC HNPKRP CE+GCG IP DELK
Sbjct: 79 LSITCDNAPYGCTAVLKLDAYNSHLEECIHNPKRPFPCEKGCGFDIPKDELK 130
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDEEL C ICSGV E+PLQ C
Sbjct: 1 MGYDVNRFQGEVDEELTCPICSGVLEDPLQAVMC 34
>gi|301610055|ref|XP_002934542.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 317
Score = 239 bits (611), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 146/187 (78%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q++E KR + +L+ MRA++ +NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQIRIGELEKAAAESKHQLSEQKRDIQLLKAYMRAIRSANPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVSRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|148692620|gb|EDL24567.1| ring finger protein 41, isoform CRA_b [Mus musculus]
Length = 199
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 11 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 70
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 71 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 130
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 131 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 190
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 191 IFAHGVE 197
>gi|26327505|dbj|BAC27496.1| unnamed protein product [Mus musculus]
gi|26336188|dbj|BAC31779.1| unnamed protein product [Mus musculus]
Length = 194
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 6 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 65
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 66 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 125
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 126 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 185
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 186 IFAHGVE 192
>gi|326935965|ref|XP_003214033.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Meleagris
gallopavo]
Length = 317
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPTSIINELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL +CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQITCDNAVFGCTAVVRLDNLMSHLNDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|18044034|gb|AAH19415.1| Rnf41 protein [Mus musculus]
Length = 194
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 6 LPNHNCIKHLRSVVQQQQSRIAELEKTRAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 65
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 66 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 125
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 126 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 185
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 186 IFAHGVE 192
>gi|194374611|dbj|BAG62420.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E R Q+ E KR + +L+ MRA++ NP
Sbjct: 55 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHRHQLAEQKRDIQLLKAYMRAIRSVNP 114
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 115 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 174
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 175 LIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 234
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 235 LVMIFAHGVE 244
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 8 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 58
>gi|47087253|ref|NP_998681.1| E3 ubiquitin-protein ligase NRDP1 [Danio rerio]
gi|82241451|sp|Q7ZW16.1|RNF41_DANRE RecName: Full=E3 ubiquitin-protein ligase NRDP1; AltName: Full=RING
finger protein 41
gi|28278319|gb|AAH45329.1| Zgc:55389 [Danio rerio]
Length = 318
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 146/187 (78%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
+ +HNC+K LRS+V +QQ K+ ++E +E + Q+ E KR + +L+ MRA++ +NP ++
Sbjct: 129 MPNHNCIKHLRSVVQQQQTKIADLEKTAAEHKHQLAEQKRDIQLLKAYMRAIRSANPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E++E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++ L+
Sbjct: 189 NLEESIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPLSIVNDLIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDMI PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMILEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L ISCDNA +GCT ++LD SHL +CEHNPKRPV CE+GCG +P DE+
Sbjct: 79 LQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVTCEEGCGLEMPKDEM 129
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDE+L+C ICSGV EEP++ +C
Sbjct: 1 MGYDVTRFQGEVDEDLLCPICSGVLEEPVRAPHC 34
>gi|426224961|ref|XP_004006637.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Ovis aries]
Length = 246
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP
Sbjct: 55 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNP 114
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 115 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 174
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 175 LIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 234
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 235 LVMIFAHGVE 244
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 8 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 58
>gi|37588859|ref|NP_919339.1| E3 ubiquitin-protein ligase NRDP1 isoform 2 [Homo sapiens]
gi|109097279|ref|XP_001114568.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 1 [Macaca
mulatta]
gi|114644278|ref|XP_001169193.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Pan
troglodytes]
gi|332267318|ref|XP_003282630.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 2
[Nomascus leucogenys]
gi|332838961|ref|XP_003313638.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Pan troglodytes]
gi|332838963|ref|XP_003313639.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Pan troglodytes]
gi|390467783|ref|XP_003733824.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Callithrix jacchus]
gi|397509104|ref|XP_003824976.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Pan
paniscus]
gi|402886440|ref|XP_003906637.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 5 [Papio
anubis]
gi|426373021|ref|XP_004053411.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Gorilla
gorilla gorilla]
gi|426373023|ref|XP_004053412.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 4 [Gorilla
gorilla gorilla]
gi|426373025|ref|XP_004053413.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 5 [Gorilla
gorilla gorilla]
gi|119617315|gb|EAW96909.1| ring finger protein 41, isoform CRA_a [Homo sapiens]
Length = 246
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP
Sbjct: 55 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNP 114
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 115 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 174
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 175 LIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 234
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 235 LVMIFAHGVE 244
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 8 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 58
>gi|58865962|ref|NP_001012195.1| E3 ubiquitin-protein ligase NRDP1 [Rattus norvegicus]
gi|53733437|gb|AAH83614.1| Ring finger protein 41 [Rattus norvegicus]
Length = 297
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 109 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 168
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 169 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 228
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 229 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 288
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 289 IFAHGVE 295
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LDS SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 59 LQIACDNAVFGCSAVVRLDSLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 109
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY++ RF G+VDE+LIC ICSGV EEP+Q
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQ 30
>gi|402886436|ref|XP_003906635.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Papio
anubis]
gi|402886438|ref|XP_003906636.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 4 [Papio
anubis]
Length = 331
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP
Sbjct: 140 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNP 199
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 200 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 259
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 260 LIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 319
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 320 LVMIFAHGVE 329
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 93 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 143
>gi|148232884|ref|NP_001089261.1| E3 ubiquitin-protein ligase NRDP1 [Xenopus laevis]
gi|82231272|sp|Q5FWL3.1|RNF41_XENLA RecName: Full=E3 ubiquitin-protein ligase NRDP1; AltName: Full=RING
finger protein 41
gi|58402660|gb|AAH89294.1| MGC85030 protein [Xenopus laevis]
gi|80478576|gb|AAI08759.1| MGC85030 protein [Xenopus laevis]
Length = 317
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 145/185 (78%)
Query: 119 DHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVL 178
+HNC+K LRS+V +QQ ++ +E +E + Q++E KR + +L+ MRA++ +NP ++ L
Sbjct: 131 NHNCIKHLRSVVQQQQIRIGELEKTAAESKHQLSEQKRDIQLLKAYMRAIRSANPNLQNL 190
Query: 179 AENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNS 238
E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++++ N+
Sbjct: 191 EETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNEIIENA 250
Query: 239 HERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIF 298
HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PGLVMIF
Sbjct: 251 HERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPGLVMIF 310
Query: 299 AHGIE 303
AHG+E
Sbjct: 311 AHGVE 315
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL++CEHNPKRPV CEQGCG +P DE+
Sbjct: 79 LQITCDNAVFGCTTIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEV 129
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVSRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|301760500|ref|XP_002916028.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Ailuropoda
melanoleuca]
gi|281353261|gb|EFB28845.1| hypothetical protein PANDA_004082 [Ailuropoda melanoleuca]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKSSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|327264383|ref|XP_003216993.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Anolis
carolinensis]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPTSIINELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ E+M+ PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEEMVLEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL +CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQITCDNAVFGCTAVVRLDNLMSHLNDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|31543597|ref|NP_080535.2| E3 ubiquitin-protein ligase NRDP1 [Mus musculus]
gi|255982608|ref|NP_001157709.1| E3 ubiquitin-protein ligase NRDP1 [Mus musculus]
gi|81913133|sp|Q8BH75.1|RNF41_MOUSE RecName: Full=E3 ubiquitin-protein ligase NRDP1; AltName: Full=RING
finger protein 41
gi|26324500|dbj|BAC26004.1| unnamed protein product [Mus musculus]
gi|26326553|dbj|BAC27020.1| unnamed protein product [Mus musculus]
gi|26330023|dbj|BAC28750.1| unnamed protein product [Mus musculus]
gi|26346324|dbj|BAC36813.1| unnamed protein product [Mus musculus]
gi|29144979|gb|AAH49078.1| Ring finger protein 41 [Mus musculus]
gi|148692619|gb|EDL24566.1| ring finger protein 41, isoform CRA_a [Mus musculus]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|417409374|gb|JAA51196.1| Putative e3 ubiquitin-protein ligase nrdp1, partial [Desmodus
rotundus]
Length = 289
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 101 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 160
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 161 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 220
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 221 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 280
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 281 IFAHGVE 287
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 51 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 101
>gi|149029689|gb|EDL84860.1| rCG42493 [Rattus norvegicus]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LDS SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDSLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|348502786|ref|XP_003438948.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Oreochromis
niloticus]
Length = 318
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 146/187 (78%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ K+ +E ++E + Q+ E KR + +L+ MRA++ +NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTKISELEKTVAEHKHQLGEQKRDIQLLKAYMRAIRSANPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E++E +++ W NS+ ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++ L+
Sbjct: 189 NLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPLSIVNDLIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDMI PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMILEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L ISCDNAS+GCT ++LD SHL +CEHNPKRPV CE+GCG +P DEL
Sbjct: 79 LQISCDNASFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGCGLEMPKDEL 129
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDE+L+C ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHC 34
>gi|12861135|dbj|BAB32125.1| unnamed protein product [Mus musculus]
Length = 313
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 125 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 184
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 185 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 244
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 245 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 304
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 305 IFAHGVE 311
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 75 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 125
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 93 IVRFIGEVDEELICSICSGVFEEPLQDHNC 122
+ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 VTRFQGDVDEDLICPICSGVLEEPVQAPHC 30
>gi|395540515|ref|XP_003772199.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Sarcophilus
harrisii]
gi|395540517|ref|XP_003772200.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Sarcophilus
harrisii]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|114051760|ref|NP_001039990.1| E3 ubiquitin-protein ligase NRDP1 [Bos taurus]
gi|311255670|ref|XP_001927720.2| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1 [Sus
scrofa]
gi|344266209|ref|XP_003405173.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Loxodonta
africana]
gi|350584094|ref|XP_003481664.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 2 [Sus
scrofa]
gi|426224957|ref|XP_004006635.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Ovis aries]
gi|426224959|ref|XP_004006636.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Ovis aries]
gi|86438452|gb|AAI12725.1| Ring finger protein 41 [Bos taurus]
gi|146231766|gb|ABQ12958.1| ring finger protein 41 [Bos taurus]
gi|440899465|gb|ELR50762.1| E3 ubiquitin-protein ligase NRDP1 [Bos grunniens mutus]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|5032071|ref|NP_005776.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Homo sapiens]
gi|37588861|ref|NP_919340.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Homo sapiens]
gi|197098628|ref|NP_001126274.1| E3 ubiquitin-protein ligase NRDP1 [Pongo abelii]
gi|302564618|ref|NP_001181577.1| E3 ubiquitin-protein ligase NRDP1 [Macaca mulatta]
gi|338827618|ref|NP_001229755.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Homo sapiens]
gi|55638265|ref|XP_509139.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Pan
troglodytes]
gi|73968369|ref|XP_848722.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Canis lupus
familiaris]
gi|73968373|ref|XP_856953.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Canis lupus
familiaris]
gi|109097277|ref|XP_001114651.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 5 [Macaca
mulatta]
gi|114644276|ref|XP_001169244.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Pan
troglodytes]
gi|149756575|ref|XP_001504876.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1 [Equus caballus]
gi|296212009|ref|XP_002752649.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Callithrix
jacchus]
gi|332267316|ref|XP_003282629.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1
[Nomascus leucogenys]
gi|332838958|ref|XP_003313637.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Pan troglodytes]
gi|395835194|ref|XP_003790567.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Otolemur
garnettii]
gi|395835196|ref|XP_003790568.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Otolemur
garnettii]
gi|397509100|ref|XP_003824974.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Pan
paniscus]
gi|397509102|ref|XP_003824975.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Pan
paniscus]
gi|402886432|ref|XP_003906633.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Papio
anubis]
gi|402886434|ref|XP_003906634.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Papio
anubis]
gi|403296973|ref|XP_003939367.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403296975|ref|XP_003939368.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403296977|ref|XP_003939369.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 3 [Saimiri
boliviensis boliviensis]
gi|410046508|ref|XP_003952205.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Pan troglodytes]
gi|410964783|ref|XP_003988932.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Felis
catus]
gi|410964785|ref|XP_003988933.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Felis
catus]
gi|426373017|ref|XP_004053409.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 1 [Gorilla
gorilla gorilla]
gi|426373019|ref|XP_004053410.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 isoform 2 [Gorilla
gorilla gorilla]
gi|75070600|sp|Q5R7T5.1|RNF41_PONAB RecName: Full=E3 ubiquitin-protein ligase NRDP1; AltName: Full=RING
finger protein 41
gi|88909120|sp|Q9H4P4.2|RNF41_HUMAN RecName: Full=E3 ubiquitin-protein ligase NRDP1; AltName: Full=RING
finger protein 41
gi|13569338|gb|AAK31071.1|AF305730_1 fetal liver ring finger protein [Mus musculus]
gi|3342562|gb|AAC27647.1| hypothetical SBBI03 protein [Homo sapiens]
gi|21619730|gb|AAH32637.1| Ring finger protein 41 [Homo sapiens]
gi|55730913|emb|CAH92175.1| hypothetical protein [Pongo abelii]
gi|119617316|gb|EAW96910.1| ring finger protein 41, isoform CRA_b [Homo sapiens]
gi|119617317|gb|EAW96911.1| ring finger protein 41, isoform CRA_b [Homo sapiens]
gi|167773705|gb|ABZ92287.1| ring finger protein 41 [synthetic construct]
gi|189054560|dbj|BAG37335.1| unnamed protein product [Homo sapiens]
gi|261859088|dbj|BAI46066.1| ring finger protein 41 [synthetic construct]
gi|355564353|gb|EHH20853.1| E3 ubiquitin-protein ligase NRDP1 [Macaca mulatta]
gi|355786209|gb|EHH66392.1| E3 ubiquitin-protein ligase NRDP1 [Macaca fascicularis]
gi|380808644|gb|AFE76197.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Macaca mulatta]
gi|383414997|gb|AFH30712.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Macaca mulatta]
gi|384944658|gb|AFI35934.1| E3 ubiquitin-protein ligase NRDP1 isoform 1 [Macaca mulatta]
gi|410224444|gb|JAA09441.1| ring finger protein 41 [Pan troglodytes]
gi|410258192|gb|JAA17063.1| ring finger protein 41 [Pan troglodytes]
gi|410305260|gb|JAA31230.1| ring finger protein 41 [Pan troglodytes]
gi|410338215|gb|JAA38054.1| ring finger protein 41 [Pan troglodytes]
Length = 317
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|443732907|gb|ELU17470.1| hypothetical protein CAPTEDRAFT_183023 [Capitella teleta]
Length = 319
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 157/205 (76%), Gaps = 6/205 (2%)
Query: 103 ELICSICSGVFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQ 162
EL C + V ++ LQ HNCV+ELR+++ +QQ K+ +++TE +E + Q EL+R++ +L+
Sbjct: 117 ELGCGLV--VPKDELQTHNCVRELRTLMQQQQTKISDLQTEGAELKVQTAELRREIQLLK 174
Query: 163 ELMRAMK----VSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIK 218
E MRAM+ VS+ + + ++D++ RW +LS ARV+RWGGMISTPD +LQ++IK
Sbjct: 175 EYMRAMRMNTSVSSSRLGREGTSDDQDEIIRWVGTLSPARVSRWGGMISTPDAVLQSVIK 234
Query: 219 RSLAESGCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLL 278
R+L ESGCP HIL+ LM N+HER WP GLS+LETRQ NRRQYENYV KRIP KQAVVV+
Sbjct: 235 RALIESGCPSHILNDLMENAHERRWPPGLSTLETRQINRRQYENYVSKRIPGKQAVVVMS 294
Query: 279 CDNVHLPEDMISAPGLVMIFAHGIE 303
C+N H+P++MI PGLVMIFAHG++
Sbjct: 295 CENAHMPDEMIMEPGLVMIFAHGVD 319
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF VDEEL+C ICSGV EEPLQ NC
Sbjct: 1 MGYEVARFSATVDEELVCPICSGVLEEPLQAPNC 34
>gi|354488151|ref|XP_003506234.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Cricetulus
griseus]
gi|344256407|gb|EGW12511.1| E3 ubiquitin-protein ligase NRDP1 [Cricetulus griseus]
Length = 317
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP
Sbjct: 126 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNP 185
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 186 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 245
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 246 LIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 305
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 306 LVMIFAHGVE 315
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV C+QGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCDQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|194385980|dbj|BAG65365.1| unnamed protein product [Homo sapiens]
Length = 304
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 116 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 175
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 176 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 235
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 236 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 295
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 296 IFAHGVE 302
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 66 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 116
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|355716954|gb|AES05776.1| ring finger protein 41 [Mustela putorius furo]
Length = 316
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|348580942|ref|XP_003476237.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 2 [Cavia
porcellus]
Length = 297
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 109 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 168
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 169 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 228
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 229 NAHERSWPQGLATLETRQMNRRFYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 288
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 289 IFAHGVE 295
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 59 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 109
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY++ RF G+VDE+LIC ICSGV EEP+Q
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQ 30
>gi|363747380|ref|XP_424113.3| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NRDP1
[Gallus gallus]
Length = 317
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 143/187 (76%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGG ISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGXISTPDAVLQAVIKRSLVESGCPTSIINELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT V+LD+ SHL +CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQITCDNAVFGCTAVVRLDNLMSHLNDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVARFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|348580940|ref|XP_003476236.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like isoform 1 [Cavia
porcellus]
Length = 317
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRFYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|351703625|gb|EHB06544.1| E3 ubiquitin-protein ligase NRDP1 [Heterocephalus glaber]
Length = 415
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP
Sbjct: 224 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNP 283
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++
Sbjct: 284 NLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNE 343
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PG
Sbjct: 344 LIENAHERSWPQGLATLETRQMNRRFYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPG 403
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 404 LVMIFAHGVE 413
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 177 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 227
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|291389429|ref|XP_002711117.1| PREDICTED: ring finger protein 41 [Oryctolagus cuniculus]
Length = 317
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LR++V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRTVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|410900059|ref|XP_003963514.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Takifugu
rubripes]
Length = 318
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 146/187 (78%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ K+ +E ++E + Q+ E KR + +L+ MRA++ +NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTKISELEKTVAEHKHQLGEQKRDIQLLKAYMRAIRSANPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E++E +++ W NS+ ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++ L+
Sbjct: 189 NLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPHSIVNDLIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV K+IP KQAVVV+ C+N H+ EDMI PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKQIPGKQAVVVMACENQHMGEDMILEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L ISCDNA +GCT ++LD SHL +CEHNPKRPV CE+GCG +P DEL
Sbjct: 79 LQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDE+L+C ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHC 34
>gi|47229205|emb|CAG03957.1| unnamed protein product [Tetraodon nigroviridis]
Length = 299
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 148/190 (77%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ K+ +E ++E + Q+ E KR + +L+ MRA++ +NP
Sbjct: 108 KDELPNHNCIKHLRSVVQQQQTKISELEKSVAEHKHQLGEQKRDIQLLKAYMRAIRSANP 167
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E++E +++ W NS+ ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++
Sbjct: 168 NLQNLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPHSIVND 227
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HERNWPQGL++LETRQ NRR YENYV K+IP KQAVVV+ C+N H+ EDMI PG
Sbjct: 228 LIENAHERNWPQGLATLETRQMNRRYYENYVAKQIPGKQAVVVMACENQHMGEDMILEPG 287
Query: 294 LVMIFAHGIE 303
LVMIFAHG+E
Sbjct: 288 LVMIFAHGVE 297
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L ISCDNA +GCT ++LD SHL +CEHNPKRPV CE+GCG +P DEL
Sbjct: 61 LQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGCGLEMPKDEL 111
>gi|12854194|dbj|BAB29953.1| unnamed protein product [Mus musculus]
Length = 317
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV +RIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAERIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|241671742|ref|XP_002400131.1| E3 ubiquitin protein ligase NRDP1, putative [Ixodes scapularis]
gi|215506275|gb|EEC15769.1| E3 ubiquitin protein ligase NRDP1, putative [Ixodes scapularis]
Length = 316
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/193 (58%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
+ ++ L+DHNCVKELR++V QQQ++ + E+ EQ ++ LK + VLQ+ +RAM+ +
Sbjct: 124 IPKDELKDHNCVKELRALVQSQQQRLNEFQLEIREQWREINVLKVVVFVLQDYIRAMRAA 183
Query: 172 N-PGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHI 230
N P +L +E+D+V W+ L RARVTRWGGMISTPD +LQAM+KR+L +SGCP HI
Sbjct: 184 NSPAPPLLDSLVEQDEVMGWAAKLQRARVTRWGGMISTPDAVLQAMVKRALTDSGCPQHI 243
Query: 231 LDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMIS 290
L L+ N+HER WP GLS+LETRQ NRR YE+YVCKRIP KQAVVV+ C+N H+ EDM+
Sbjct: 244 LQALIENAHERRWPPGLSTLETRQMNRRHYESYVCKRIPGKQAVVVVACENQHMNEDMVL 303
Query: 291 APGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 304 EPGLVMIFAHGIE 316
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L +SCDNA +GC VKLD +SH CEHNP+RP+ CEQGCG VIP DELK
Sbjct: 79 LQMSCDNAQFGCEAIVKLDCLASHREACEHNPRRPMPCEQGCGLVIPKDELK 130
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEELIC +CSGV EEPLQ C
Sbjct: 1 MGYDLCRFQGDVDEELICPVCSGVLEEPLQAPQC 34
>gi|26328631|dbj|BAC28054.1| unnamed protein product [Mus musculus]
Length = 317
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 144/187 (77%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ M+A++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMQAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVM
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|156407882|ref|XP_001641586.1| predicted protein [Nematostella vectensis]
gi|156228725|gb|EDO49523.1| predicted protein [Nematostella vectensis]
Length = 327
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 176/315 (55%), Gaps = 78/315 (24%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
LVISCDN ++GC V V+LD SHL +C+HNPKRPVQC++GCG V+P DEL+
Sbjct: 79 LVISCDNVTFGCEVMVRLDGLQSHLAQCDHNPKRPVQCDKGCGLVVPFDELQ-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL+ Q+L A
Sbjct: 131 ----QHNCVRELNTIIQSQNLKMA------------------------------------ 150
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSN-------- 172
EL++ + Q+Q+ + E KR++ +++E++R M++ N
Sbjct: 151 ----ELQAQIDDQRQQ--------------LNEQKREMQMMKEMIRTMRMINVPQTLPAL 192
Query: 173 PGVRVLAE----NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPG 228
PG + D++ W SL ARVTRWGGMISTPD +LQA+I+R+LA+SGCP
Sbjct: 193 PGPHTHSPPSMIEHNTDELLEWVLSLQPARVTRWGGMISTPDAVLQAVIRRALADSGCPS 252
Query: 229 HILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDM 288
+IL++LM N+HER WP GLS+LETRQ NRR+YE YVC RI KQAVV++ C+N H+ E M
Sbjct: 253 NILNELMENAHERRWPPGLSTLETRQLNRRRYEQYVCHRIAGKQAVVIMKCENEHMGETM 312
Query: 289 ISAPGLVMIFAHGIE 303
PG+VMIFAHGIE
Sbjct: 313 TLDPGIVMIFAHGIE 327
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNCVKEL-RSIVHKQQQKMVNMETEMSEQ 147
MGY+I RF GEVDEEL+CSIC GV E+PLQ C +H + +N +
Sbjct: 1 MGYDIGRFQGEVDEELVCSICGGVLEDPLQAPVCEHAFCAGCIH----EWLNHQNNCPID 56
Query: 148 RFQMT--ELKRQLTVLQELMRAMKVSNPGVRVLAENMERDD 186
R +T +LK+ +L+ L+ + +S V E M R D
Sbjct: 57 RRTLTPLQLKQVPRILKNLLSKLVISCDNVTFGCEVMVRLD 97
>gi|432866782|ref|XP_004070933.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Oryzias latipes]
Length = 318
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 143/187 (76%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L HNC+K LRS+V +QQ K+ +E ++E + Q+ E KR + +L+ MRA+ +NP ++
Sbjct: 129 LPSHNCIKHLRSVVQQQQTKISELEKNVAEHKHQLGEQKRDIQLLKAYMRAICSANPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E++E +++ W NS+ ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++ L+
Sbjct: 189 NLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPLSIVNDLIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVM 296
N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ ED I PGLVM
Sbjct: 249 NAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDKILEPGLVM 308
Query: 297 IFAHGIE 303
IFAHG+E
Sbjct: 309 IFAHGVE 315
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNASYGCT ++LD SHL +CEHNPKRPV CE+GCG +P DEL S+ C
Sbjct: 79 LQINCDNASYGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGCGLEMPKDELP--SHNCIK 136
Query: 61 H 61
H
Sbjct: 137 H 137
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDE+L+C ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGEVDEDLLCPICSGVLEEPVQAPHC 34
>gi|213513710|ref|NP_001134731.1| E3 ubiquitin-protein ligase NRDP1 [Salmo salar]
gi|209735502|gb|ACI68620.1| E3 ubiquitin-protein ligase NRDP1 [Salmo salar]
Length = 318
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 142/185 (76%)
Query: 119 DHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVL 178
+HNC+K LR +V +QQ K+ +E E + Q+ E KR + +L+ MRA++ +NP ++ L
Sbjct: 131 NHNCIKHLRGVVQQQQTKISELEKNAVEHKHQLGEQKRDIQLLKAYMRAIRSANPNMQNL 190
Query: 179 AENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNS 238
E++E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL +SGCP I++ L+ N+
Sbjct: 191 EESIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPLSIVNDLIENA 250
Query: 239 HERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIF 298
HERNWPQGL++LETRQ NRR YENYV KRIP KQAVV++ C+N H+ EDMI PGLVMIF
Sbjct: 251 HERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVLMACENQHMGEDMILEPGLVMIF 310
Query: 299 AHGIE 303
AHG+E
Sbjct: 311 AHGVE 315
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT ++LD SHL +CEHNPKRP+ CE+GCG +P DE+
Sbjct: 79 LQIACDNAGFGCTATLRLDQLQSHLKDCEHNPKRPINCEEGCGLEMPKDEM 129
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF GEVDE+L+C ICS V EEP+Q +C
Sbjct: 1 MGYDVTRFQGEVDEDLLCPICSMVLEEPVQAPHC 34
>gi|345312523|ref|XP_001516965.2| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Ornithorhynchus
anatinus]
Length = 250
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 154/248 (62%), Gaps = 33/248 (13%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ------------------------DHNCVK 124
MGY++ RF G+VDE+LIC ICSGV EEP+Q
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQGLPDPHTHPSHGDPGDNRLWWVCASSQSTP 60
Query: 125 ELRSIVHKQQQKMVNMETEMSEQRFQM---------TELKRQLTVLQELMRAMKVSNPGV 175
+ + + +++F M + KR + +L+ +RA++ NP +
Sbjct: 61 PTPGSPQTRPESWPGEPKGLRQRQFGMEWGPPSARPPKCKRDIQLLKACIRAIRSVNPNL 120
Query: 176 RVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLM 235
+ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 121 QNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELI 180
Query: 236 HNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLV 295
N+HER+WPQGL++LETRQ NRR YENYV KR+P KQAVVV+ CDN H+ EDM+ PGLV
Sbjct: 181 ENAHERSWPQGLATLETRQLNRRYYENYVAKRVPGKQAVVVMACDNQHMGEDMVQEPGLV 240
Query: 296 MIFAHGIE 303
MIFAHG+E
Sbjct: 241 MIFAHGVE 248
>gi|147903078|ref|NP_001088254.1| uncharacterized protein LOC495085 [Xenopus laevis]
gi|54038008|gb|AAH84252.1| LOC495085 protein [Xenopus laevis]
Length = 315
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 144/190 (75%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ L +HNC+K LRS+V +QQ ++ +E +E + Q++E KR + +L+ RA++ +NP
Sbjct: 126 KDELPNHNCIKHLRSVVQQQQIRIGELEKAAAESKHQLSEQKRDIQLLKAYTRAIRSANP 185
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
++ L E ++ +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+ +
Sbjct: 186 NIQNLEETIKYNEILEWVNSLQPARVTRWGGMISTPDGVLQAVIKRSLLESGCPASIIHE 245
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPG 293
L+ N+HE NWPQGL++LETRQ NRR YENYV KRIP KQAV+V+ C+N H+ E+M+ PG
Sbjct: 246 LIENTHECNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVLVMACENQHMGENMVLEPG 305
Query: 294 LVMIFAHGIE 303
LV+ FAHG+E
Sbjct: 306 LVLFFAHGVE 315
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GCT +LD+ SHL++CEHNPKRPV C+QGCG +P DEL
Sbjct: 79 LQITCDNAVFGCTSIARLDNLMSHLSDCEHNPKRPVTCKQGCGLEMPKDEL 129
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVSRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|405959760|gb|EKC25754.1| E3 ubiquitin-protein ligase NRDP1 [Crassostrea gigas]
Length = 271
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/271 (46%), Positives = 162/271 (59%), Gaps = 56/271 (20%)
Query: 89 MGYEIVRFIGEVDEELICSICSGV----FEEPLQDHN----CVKE--------------- 125
MGYE+ RF G+VDEEL+C ICSGV + P +H C++E
Sbjct: 1 MGYELNRFQGDVDEELVCPICSGVLEEPLQAPQCEHAFCGACIQEWLTRQPTCPVDRNPI 60
Query: 126 -----------LRSIVHKQQQKMVN--------METEMSEQRFQMTELKRQLTV------ 160
LR+++ + Q N ++ +M Q E + V
Sbjct: 61 TPNQLKPVPRILRNLLSRLQIACDNATYGCTAVVKLDMLSAHIQECEHNPKKPVHCESGC 120
Query: 161 --------LQELMRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVM 212
L+E MR+M+VSNP +R + ME DV RW NSL ARVTRWGGMISTPD +
Sbjct: 121 GIVVPKDELKEYMRSMRVSNPRMREIQSEMENADVLRWVNSLQTARVTRWGGMISTPDAV 180
Query: 213 LQAMIKRSLAESGCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQ 272
LQA+IKR+L +SG P HI+++LM N+HER WP GLS+LETRQ NRRQYENYV KRIP KQ
Sbjct: 181 LQAVIKRALIDSGSPPHIVNELMENAHERRWPNGLSTLETRQLNRRQYENYVTKRIPGKQ 240
Query: 273 AVVVLLCDNVHLPEDMISAPGLVMIFAHGIE 303
AVVV+ C+N H+P+D+I PGLVMIFAHG+E
Sbjct: 241 AVVVMSCENEHMPDDLIMEPGLVMIFAHGVE 271
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I+CDNA+YGCT VKLD S+H+ ECEHNPK+PV CE GCG V+P DELK
Sbjct: 79 LQIACDNATYGCTAVVKLDMLSAHIQECEHNPKKPVHCESGCGIVVPKDELK 130
>gi|427788155|gb|JAA59529.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 309
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/193 (56%), Positives = 142/193 (73%), Gaps = 8/193 (4%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKV- 170
+ ++ L+DHNCVKELRS+V QQQ++ + E+ EQ R++ +L++ +R+M+
Sbjct: 124 IPKDELKDHNCVKELRSLVQSQQQRLNEFQLEIREQ-------WREINLLKDYIRSMRTF 176
Query: 171 SNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHI 230
S+P L +E+D+V W+ L RARVTRWG MISTPD MLQAM+KR+L ESGCP HI
Sbjct: 177 SSPLPPALDSLVEQDEVMGWAAKLQRARVTRWGSMISTPDAMLQAMVKRALTESGCPQHI 236
Query: 231 LDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMIS 290
L L+ N+HER WP GLS+LETRQ NRR YE YVCKRIP KQAVVV+ C+N H+ +DM+
Sbjct: 237 LQVLIENAHERRWPPGLSTLETRQMNRRHYEAYVCKRIPGKQAVVVVACENQHMNDDMVL 296
Query: 291 APGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 297 EPGLVMIFAHGIE 309
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L +SCDNA +GC+ VKLD +SH CEHNP+RPV CEQGCG VIP DELK
Sbjct: 79 LQMSCDNAQFGCSAIVKLDCLTSHRETCEHNPRRPVPCEQGCGLVIPKDELK 130
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDEELIC +CSGV EEPLQ C
Sbjct: 1 MGYDLCRFQGDVDEELICPVCSGVLEEPLQAPQC 34
>gi|444518231|gb|ELV12042.1| E3 ubiquitin-protein ligase NRDP1 [Tupaia chinensis]
Length = 336
Score = 223 bits (568), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 146/209 (69%), Gaps = 19/209 (9%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQ---------------- 157
++ L +HNC+K LRS+V +QQ ++ +E +E + Q+ E + +
Sbjct: 126 KDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQRDKTFVSHLLSALTXXXXX 185
Query: 158 ---LTVLQELMRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQ 214
+ +L+ MRA++ NP ++ L E +E +++ W NSL ARVTRWGGMISTPD +LQ
Sbjct: 186 NGDIQLLKAYMRAIRSVNPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQ 245
Query: 215 AMIKRSLAESGCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAV 274
A+IKRSL ESGCP I+++L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAV
Sbjct: 246 AVIKRSLVESGCPASIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAV 305
Query: 275 VVLLCDNVHLPEDMISAPGLVMIFAHGIE 303
VV+ C+N H+ +DM+ PGLVMIFAHG+E
Sbjct: 306 VVMACENQHMGDDMVQEPGLVMIFAHGVE 334
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|221123835|ref|XP_002155270.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Hydra
magnipapillata]
Length = 318
Score = 221 bits (562), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 177/303 (58%), Gaps = 64/303 (21%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L ISC+N+S+GCT VKLD+ HL EC HNPKRPV+C+ GC +IP+DE+
Sbjct: 80 LTISCNNSSFGCTTNVKLDALHIHLNECNHNPKRPVRCDHGCNLIIPLDEIG-------- 131
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
QH+ + LH+ I+ + V+ I E+ +++I
Sbjct: 132 -QHNC------------VKELHS----IINAQSVQ-INEIKDQVI------------DFQ 161
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
N + ELR + VN+ T++ + F M+ + L L R
Sbjct: 162 NQINELR--------REVNVVTDVM-RGFHMSTI-----ALPPLQRGFTDCT-------- 199
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
D+V +W +L +A+VTRWGGMISTPD +LQA+I+RSL++SGCP +ILD LM N+HE
Sbjct: 200 ----DEVLQWLQTLPKAKVTRWGGMISTPDAVLQAVIRRSLSDSGCPSYILDDLMENAHE 255
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAH 300
R W QGLS+LETRQ NRR+YE Y+ +RIP KQAVVV+ C+N H+ ++ PG+VMIFAH
Sbjct: 256 RRWSQGLSTLETRQINRRRYEQYIARRIPGKQAVVVMACENHHMGMLLVQEPGIVMIFAH 315
Query: 301 GIE 303
GIE
Sbjct: 316 GIE 318
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 89 MGYEIVRFIG-EVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G EVDEEL+C IC+GV E+P+Q C
Sbjct: 1 MGYDVNRFNGCEVDEELLCPICNGVLEDPVQAPVC 35
>gi|242019821|ref|XP_002430357.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212515481|gb|EEB17619.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 286
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 142/200 (71%), Gaps = 31/200 (15%)
Query: 106 CSICSGVF--EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQE 163
C + G+ ++ ++DHNCVKELR+++ K Q+K+ + + ++SEQRFQ+ + K++L++L+E
Sbjct: 116 CDLGCGLVIPKDEIKDHNCVKELRALIQKYQEKLSDFQQQLSEQRFQLEQQKQELSLLKE 175
Query: 164 LMRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAE 223
MRAM+VSNP +R LA+ ME+D+V RWS +L RARVTRWGGMISTPD +LQA
Sbjct: 176 FMRAMRVSNPNLRALADQMEQDEVVRWSATLPRARVTRWGGMISTPDALLQAA------- 228
Query: 224 SGCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVH 283
GLSSLETRQ+NRR YENYVCK++P KQAVVVL CDN H
Sbjct: 229 ----------------------GLSSLETRQSNRRSYENYVCKKVPGKQAVVVLHCDNHH 266
Query: 284 LPEDMISAPGLVMIFAHGIE 303
+ +DMI+ PGL+MIFAHGIE
Sbjct: 267 MTDDMITEPGLLMIFAHGIE 286
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I+CDNA YGC+ +KL+ ++H+ ECE NPKRP+ C+ GCG VIP DE+K
Sbjct: 79 LNINCDNALYGCSSVLKLNDLANHVEECEFNPKRPIPCDLGCGLVIPKDEIK 130
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY+I RF GEVDEEL+C IC+GV E+P+Q +C
Sbjct: 1 MGYDIGRFQGEVDEELLCPICTGVLEDPIQAPSC 34
>gi|431914012|gb|ELK15274.1| SWI/SNF complex subunit SMARCC2 [Pteropus alecto]
Length = 1396
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 131/172 (76%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 140 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 199
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 200 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 259
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDM 288
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM
Sbjct: 260 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDM 311
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 90 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 140
>gi|449273204|gb|EMC82800.1| E3 ubiquitin-protein ligase NRDP1, partial [Columba livia]
Length = 194
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 135/189 (71%), Gaps = 6/189 (3%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTE--LKRQLTVLQELMRAMKVSNPG 174
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E + Q + + R +K S
Sbjct: 8 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQVVSSQYHSMFGIGRDLKSSPSA 67
Query: 175 VRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQL 234
+ + N + RW NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L
Sbjct: 68 IPPWSRNTQ----MRWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPTSIINEL 123
Query: 235 MHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGL 294
+ N+HERNWPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ EDM+ PGL
Sbjct: 124 IENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDMVLEPGL 183
Query: 295 VMIFAHGIE 303
VMIFAHG+E
Sbjct: 184 VMIFAHGVE 192
>gi|296487449|tpg|DAA29562.1| TPA: E3 ubiquitin-protein ligase NRDP1 [Bos taurus]
Length = 295
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 127/167 (76%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L +HNC+K LRS+V +QQ ++ +E +E + Q+ E KR + +L+ MRA++ NP ++
Sbjct: 129 LPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQ 188
Query: 177 VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMH 236
L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+
Sbjct: 189 NLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIE 248
Query: 237 NSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVH 283
N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H
Sbjct: 249 NAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQH 295
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I+CDNA +GC+ V+LD+ SHL++CEHNPKRPV CEQGCG +P DEL
Sbjct: 79 LQIACDNAVFGCSAIVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDEL 129
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G+VDE+LIC ICSGV EEP+Q +C
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHC 34
>gi|391348267|ref|XP_003748369.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Metaseiulus
occidentalis]
Length = 312
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 134/192 (69%), Gaps = 6/192 (3%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ L++HNC++ELR +V KQQ K+ ++ E+ ++ +K L Q ++
Sbjct: 127 VPKDELREHNCIRELRGVVQKQQAKISELDQELQSHWREINRMKEFLAPRQNGLQPPLSD 186
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
VL E +D + +WS +L+ ARVTRWGGMISTPD +LQ+M+KR+L +SGCP +
Sbjct: 187 G----VLQER--QDQLIQWSATLTEARVTRWGGMISTPDQVLQSMVKRALVDSGCPPTAI 240
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISA 291
+L+ N+HER WP GL +LETRQ NRR YEN+VCKRIP KQAVVVL CDNVH+ +MI
Sbjct: 241 HELIENAHERKWPIGLHTLETRQRNRRTYENFVCKRIPGKQAVVVLSCDNVHMGPEMIIH 300
Query: 292 PGLVMIFAHGIE 303
PGLVMIFAHGIE
Sbjct: 301 PGLVMIFAHGIE 312
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 89 MGYEIVRFI---GEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF+ VDEELIC ICSGV ++P+ C
Sbjct: 1 MGYELARFVEGGSSVDEELICPICSGVLQDPVHTPQC 37
>gi|313215311|emb|CBY42928.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 140/223 (62%), Gaps = 14/223 (6%)
Query: 92 EIVRFIGEVDEELICSI-----------CSGVFEEPLQDHNCVKELRSIVHKQQQKMVNM 140
EIVR D C C + + L +HNC+++LR + ++ +
Sbjct: 93 EIVRLDSRADHSANCEFNPKRPIRCEQCCLTIPKNELDNHNCIRDLRKQMAMINDQVTEL 152
Query: 141 ETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVT 200
+ SEQ+ + ++ RQ+ L+EL+R +P E + W+ SL+ ARVT
Sbjct: 153 KKNQSEQQNRDRDMMRQIVHLRELVRLNHAPSPRTPTQPRITE---IINWAESLNSARVT 209
Query: 201 RWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQY 260
RWGG+ISTPD +LQ +I+RSL ESGCP HI+ L+ N+HER WP+GLS+LETRQ NRR Y
Sbjct: 210 RWGGVISTPDSVLQRVIRRSLLESGCPNHIVQDLIENAHERRWPRGLSTLETRQLNRRYY 269
Query: 261 ENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAHGIE 303
++YV KRIP KQAVVVL C+N H+P DMIS PG++MIFAHG+E
Sbjct: 270 DDYVTKRIPGKQAVVVLHCENTHMPTDMISDPGIIMIFAHGVE 312
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L + C+N +GC V+LDS + H CE NPKRP++CEQ C + IP +EL
Sbjct: 80 LRVKCENKEHGCKEIVRLDSRADHSANCEFNPKRPIRCEQCCLT-IPKNEL 129
>gi|9956003|gb|AAG01988.1| similar to Homo sapiens hypothetical SBBI03 protein mRNA with
GenBank Accession Number AF077599 [Homo sapiens]
Length = 141
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 89/139 (64%), Positives = 113/139 (81%)
Query: 165 MRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAES 224
MRA++ NP ++ L E +E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ES
Sbjct: 1 MRAIRSVNPNLQNLEETIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVES 60
Query: 225 GCPGHILDQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHL 284
GCP I+++L+ N+HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+
Sbjct: 61 GCPASIVNELIENAHERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHM 120
Query: 285 PEDMISAPGLVMIFAHGIE 303
+DM+ PGLVMIFAHG+E
Sbjct: 121 GDDMVQEPGLVMIFAHGVE 139
>gi|109158113|pdb|2GWF|B Chain B, Structure Of A Usp8-Nrdp1 Complex
gi|109158115|pdb|2GWF|D Chain D, Structure Of A Usp8-Nrdp1 Complex
gi|109158117|pdb|2GWF|F Chain F, Structure Of A Usp8-Nrdp1 Complex
Length = 134
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 102/125 (81%)
Query: 179 AENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNS 238
+E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+ N+
Sbjct: 8 GSTIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENA 67
Query: 239 HERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIF 298
HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVMIF
Sbjct: 68 HERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIF 127
Query: 299 AHGIE 303
AHG+E
Sbjct: 128 AHGVE 132
>gi|93279814|pdb|2FZP|A Chain A, Crystal Structure Of The Usp8 Interaction Domain Of Human
Nrdp1
Length = 144
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 102/125 (81%)
Query: 179 AENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNS 238
+E +++ W NSL ARVTRWGGMISTPD +LQA+IKRSL ESGCP I+++L+ N+
Sbjct: 18 GSTIEYNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENA 77
Query: 239 HERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIF 298
HER+WPQGL++LETRQ NRR YENYV KRIP KQAVVV+ C+N H+ +DM+ PGLVMIF
Sbjct: 78 HERSWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGDDMVQEPGLVMIF 137
Query: 299 AHGIE 303
AHG+E
Sbjct: 138 AHGVE 142
>gi|126031577|pdb|2OGB|A Chain A, Crystal Structure Of The C-Terminal Domain Of Mouse Nrdp1
gi|126031578|pdb|2OGB|B Chain B, Crystal Structure Of The C-Terminal Domain Of Mouse Nrdp1
Length = 126
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 97/122 (79%)
Query: 182 MERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHER 241
+E +++ W NSL ARVTRWGG ISTPD +LQA+IKRSL ESGCP I+++L+ N+HER
Sbjct: 3 IEYNEILEWVNSLQPARVTRWGGXISTPDAVLQAVIKRSLVESGCPASIVNELIENAHER 62
Query: 242 NWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFAHG 301
+WPQGL++LETRQ NRR YENYV KRIP KQAVVV C+N H +D + PGLV IFAHG
Sbjct: 63 SWPQGLATLETRQXNRRYYENYVAKRIPGKQAVVVXACENQHXGDDXVQEPGLVXIFAHG 122
Query: 302 IE 303
+E
Sbjct: 123 VE 124
>gi|340375224|ref|XP_003386136.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 1
[Amphimedon queenslandica]
Length = 324
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L HNC+KELR + Q + + ++S + ++++ ++++T+L+EL+R+ S+
Sbjct: 137 LTQHNCIKELREKITNQSLVIKTLSDQVSILQQELSDQRQEMTILKELVRSSASSSSNQS 196
Query: 177 VLAENMERD-DVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLM 235
+ +E ++W + L AR+ WGG+ISTPD +LQ++I+++L+ SGCP ++L +LM
Sbjct: 197 NYPDEVEHAIQTSQWLSLLRPARIRHWGGIISTPDSILQSIIRQALSSSGCPQYLLVELM 256
Query: 236 HNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLV 295
N+HER WP GLS LETRQ NR +YE YV K++P KQAVV++ +N H+ ++MI +PG+V
Sbjct: 257 ANAHERRWPPGLSVLETRQLNRSRYEQYVTKQVPGKQAVVIMASENEHMGDNMIVSPGMV 316
Query: 296 MIFAHGIE 303
+IFAHG++
Sbjct: 317 IIFAHGVD 324
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C+N +GC L+ HL +CE+NP+RPV+C++GCGSV+PMDEL
Sbjct: 87 LRIKCENEVFGCQTVTHLEGLQLHLNQCEYNPRRPVECDRGCGSVVPMDEL 137
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF+G VDEEL C IC V + PLQ +C
Sbjct: 1 MGYEVERFVGVVDEELFCPICGLVLDSPLQIKDC 34
>gi|340375226|ref|XP_003386137.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like isoform 2
[Amphimedon queenslandica]
Length = 324
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
L HNC+KELR + Q + + ++S + ++++ ++++T+L+EL+R+ +
Sbjct: 137 LTQHNCIKELREKITNQSLVIKTLSDQVSILQQELSDQRQEMTILKELVRSSSSVSSSQS 196
Query: 177 VLAENMERD-DVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLM 235
+ +E ++W + L AR+ WGG+ISTPD +LQ++I+++L+ SGCP ++L +LM
Sbjct: 197 NYPDEVEHAIQTSQWLSLLRPARIRHWGGIISTPDSILQSIIRQALSSSGCPQYLLVELM 256
Query: 236 HNSHERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLV 295
N+HER WP GLS LETRQ NR +YE YV K++P KQAVV++ +N H+ ++MI +PG+V
Sbjct: 257 ANAHERRWPPGLSVLETRQLNRSRYEQYVTKQVPGKQAVVIMASENEHMGDNMIVSPGMV 316
Query: 296 MIFAHGIE 303
+IFAHG++
Sbjct: 317 IIFAHGVD 324
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C+N +GC L+ HL +CE+NP+RPV+C++GCGSV+PMDEL
Sbjct: 87 LRIKCENEVFGCQTVTHLEGLQLHLNQCEYNPRRPVECDRGCGSVVPMDEL 137
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF+G VDEEL C IC V + PLQ +C
Sbjct: 1 MGYEVERFVGVVDEELFCPICGLVLDSPLQIKDC 34
>gi|195398504|ref|XP_002057861.1| GJ18365 [Drosophila virilis]
gi|194141515|gb|EDW57934.1| GJ18365 [Drosophila virilis]
Length = 334
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 72/308 (23%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GCT + L+ Y +H+ C++NPK V C +GCG +P DEL
Sbjct: 79 LKIKCCFAENGCTALMPLEEYRNHVANCQNNPKVVVMCTKGCGMRVPKDELS-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL + LQDH
Sbjct: 131 ----RHNCVFEL-----------------------------------------RQQLQDH 145
Query: 121 -NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLA 179
N + ELR + Q+++ + E +R+L +LQ + ++ +NP +R +
Sbjct: 146 INAIPELRDMQAHQERR--------------LGEHRRELELLQYYIATLRATNPVIRTVG 191
Query: 180 ENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSH 239
+ ++R + RW L A V WG +ISTPD+ ++ M++ L SGCP H+++ L+ H
Sbjct: 192 DQLDRYALMRWGRGLPLASVRTWGSLISTPDMPMRLMVREGLRASGCPMHLMEILLDCCH 251
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLV 295
E +WP+GL++LE R+ N + YV + +P K VV+L DN H+PE++ G++
Sbjct: 252 EDSWPEGLTTLEMRRMNLHRLAQYVTRLLPIVITGKPCVVILGGDNAHMPENLRPVLGVI 311
Query: 296 MIFAHGIE 303
MIF G++
Sbjct: 312 MIFVDGVD 319
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ +G VDEEL+C IC+ V EEP+Q +C
Sbjct: 1 MGYDLALIVGHVDEELLCPICADVLEEPMQSSSC 34
>gi|195398502|ref|XP_002057860.1| GJ17869 [Drosophila virilis]
gi|194141514|gb|EDW57933.1| GJ17869 [Drosophila virilis]
Length = 334
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 145/308 (47%), Gaps = 72/308 (23%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GCT + L Y +H+ C++NPK V C +GCG +P DEL S+ C Y
Sbjct: 79 LKIKCSFADNGCTALMPLGEYRNHVANCQNNPKVVVMCTKGCGMRVPKDELT--SHNCVY 136
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
E LQD
Sbjct: 137 E---------------------------------------------------LREQLQDQ 145
Query: 121 -NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLA 179
+ + ELR + Q+++ ++E +R+L ++Q + A++ +NP +R +
Sbjct: 146 ISEISELRDMQAHQERR--------------LSEHRRELELVQYYVAALRSTNPVIRNVG 191
Query: 180 ENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSH 239
+ ++R + RW SL A V WG +ISTPD + M++ L SGCP H+++ LM +
Sbjct: 192 DQLDRYSLMRWGRSLPLASVRTWGSLISTPDTPMHMMVREGLRASGCPMHLINVLMDCCY 251
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLV 295
E +WP+GL++LE R+ N + YV + +P K VV+L DN H+PE++ G++
Sbjct: 252 EDSWPEGLTTLEMRRMNLHRLAQYVTRLLPIVITGKPCVVILGGDNAHMPENLRPVLGVI 311
Query: 296 MIFAHGIE 303
MIF G++
Sbjct: 312 MIFVDGVD 319
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ +G VDEEL+C IC+ V EEP+Q +C
Sbjct: 1 MGYDLALIVGHVDEELLCPICADVLEEPMQSSSC 34
>gi|392343234|ref|XP_003754829.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
NRDP1-like [Rattus norvegicus]
gi|392355643|ref|XP_003752095.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
NRDP1-like [Rattus norvegicus]
Length = 335
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 150/301 (49%), Gaps = 72/301 (23%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDN+ +GC+ V+LD+ HL++CE+NPK+ V EQGCG +P DE
Sbjct: 79 LXIACDNSVFGCSALVRLDNLMPHLSDCEYNPKQXVTGEQGCGLEMPKDERP-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
Y ++ ++CS V Q
Sbjct: 131 -----------------------------NYNCIK-----------NLCSKV----KQQE 146
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
C+ E Q++ + +++E++ + LK M+ + NP ++ L E
Sbjct: 147 TCIAE-------QEKTSAEHKHQLAEEKGNIXLLKG-------YMQTIHRVNPNLQNLEE 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGC-PGHILDQLMHNSH 239
+E + + + N L ARVT GG+ISTPD +LQA+IK ES C P +++L+
Sbjct: 193 TIEYNKILKRVNPLQPARVTHXGGLISTPDSVLQAVIKCFSVESDCHPASTVNELVTKPS 252
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRIPSKQAVVVLLCDNVHLPEDMISAPGLVMIFA 299
E +WPQGL++LET RQ EN+V K IP KQA+VV+ C+N H+ ++++ P L+MIF
Sbjct: 253 ECSWPQGLTALET-----RQXENHVAKCIPGKQAIVVMACENQHMSDNIMQEPELIMIFV 307
Query: 300 H 300
H
Sbjct: 308 H 308
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY+ F ++D++LIC ICSGV EEP+Q+ +C
Sbjct: 1 MGYDETHFPRDIDKDLICRICSGVLEEPVQEPHC 34
>gi|195116879|ref|XP_002002979.1| GI10082 [Drosophila mojavensis]
gi|193913554|gb|EDW12421.1| GI10082 [Drosophila mojavensis]
Length = 334
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 72/308 (23%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GCT + L Y H+ C++NPK V C +GCG +P DEL
Sbjct: 79 LKIKCCFAENGCTALMPLGEYRDHVANCQNNPKVVVVCNKGCGMRVPKDELS-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL + LQDH
Sbjct: 131 ----RHNCVFEL-----------------------------------------RQQLQDH 145
Query: 121 -NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLA 179
N + ELR + Q+++ + E +R+L +LQ + ++ +NP +R +
Sbjct: 146 INAIPELRDMQAHQERR--------------LGEHRRELELLQYYIATLRATNPVIRTVG 191
Query: 180 ENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSH 239
+ ++R + RW L A V WG +ISTPD+ ++ M++ L SGCP H+++ L+ H
Sbjct: 192 DQLDRYALMRWGRGLPLASVRTWGSLISTPDMPMRLMVREGLRASGCPMHLMEILLDCCH 251
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLV 295
E +WP+GL++LE R+ N + +V + +P K V+L DN H+PE++ G++
Sbjct: 252 EDSWPEGLTTLEMRRLNLHRLAQFVTRLLPVVITGKPCAVILGGDNAHMPENLRPVLGVI 311
Query: 296 MIFAHGIE 303
MIF G++
Sbjct: 312 MIFVDGVD 319
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ +G VDEEL+C IC+ V EEP+Q +C
Sbjct: 1 MGYDLALIVGHVDEELLCPICADVLEEPMQSSSC 34
>gi|194765731|ref|XP_001964980.1| GF21698 [Drosophila ananassae]
gi|190617590|gb|EDV33114.1| GF21698 [Drosophila ananassae]
Length = 332
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 138/307 (44%), Gaps = 70/307 (22%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GC+ + L+ Y SH+ CEHNPK V+C +GCG +P DEL
Sbjct: 79 LKIKCSFAENGCSQLLALEEYRSHVAGCEHNPKVVVECNKGCGMKVPKDELA-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL Q + E+ E L++
Sbjct: 131 ----RHNCVFELRELVQNQ-----------------MAEIAE--------------LKET 155
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
+ELR ++ +++ L +LQ + A++ +NP +R + E
Sbjct: 156 QATQELRIVIQRRE-----------------------LELLQYYIAALRSTNPVMRNIGE 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
++R + +W N L A V WG +ISTPD + M++ L GCP H+L+ ++ HE
Sbjct: 193 QLDRYSLMQWGNGLPLANVRTWGSLISTPDTPMHVMVRDVLRTCGCPMHLLNLMVDPCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLVM 296
WP L +L+ R+ N + YV + +P K VVVL DN H+PE++ GLVM
Sbjct: 253 TRWPDALITLDARRENHHRLNQYVTRILPPLVSGKPCVVVLGGDNTHMPENLRPTLGLVM 312
Query: 297 IFAHGIE 303
IF G+E
Sbjct: 313 IFVDGVE 319
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ + E+P+Q C
Sbjct: 1 MGFDLPYIVGHVDEELICPICADILEDPVQSCGC 34
>gi|195116881|ref|XP_002002980.1| GI17673 [Drosophila mojavensis]
gi|193913555|gb|EDW12422.1| GI17673 [Drosophila mojavensis]
Length = 334
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 72/308 (23%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GCT + L Y H+ C++NPK V C +GCG +P DE+
Sbjct: 79 LRIKCSFAENGCTALMPLGEYRDHVASCQNNPKVVVLCNRGCGMRVPRDEMS-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H EL E LQD
Sbjct: 131 ----RHNCVFEL-----------------------------------------REQLQDQ 145
Query: 121 -NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLA 179
N + ELR + Q+++ ++E +R+L ++Q + A++ +NP +R +
Sbjct: 146 VNEISELREMQAHQERR--------------LSEHRRELELVQYYVAALRSTNPVIRNVG 191
Query: 180 ENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSH 239
+ ++R + RW +L A V WG +ISTPD + M++ L SGCP H+++ LM +
Sbjct: 192 DQLDRYSLMRWGRTLPLATVRTWGSLISTPDTPMHMMVREGLRSSGCPMHLVNVLMDCCY 251
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLV 295
E +WP+GL++LE R+ N + +V + +P K V+L DN H+PE++ G++
Sbjct: 252 EDSWPEGLATLEMRRLNLHRLAQFVTRLLPVVITGKPCAVILGGDNAHMPENLRPVLGVI 311
Query: 296 MIFAHGIE 303
MIF G+E
Sbjct: 312 MIFVDGVE 319
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY+ +G VDEEL+C IC+ V EEP+Q +C
Sbjct: 1 MGYDQGLIVGHVDEELLCPICADVLEEPMQSSSC 34
>gi|194860471|ref|XP_001969591.1| GG10187 [Drosophila erecta]
gi|190661458|gb|EDV58650.1| GG10187 [Drosophila erecta]
Length = 332
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 114 EEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNP 173
++ + HNCV ELR +V +++ +++ ++++ Q + +R+L + Q + A++ +NP
Sbjct: 126 KDEMSRHNCVFELREVVETVVKEVSDLKQKVTDLEAQSSSQRRELELFQYYIAALRSTNP 185
Query: 174 GVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQ 233
+R + E ++R + +W N L A V WG +ISTPD + M++ L SGCP H+L+
Sbjct: 186 VLRNIGEQLDRFSLMQWGNGLRLATVNSWGSLISTPDSPMHLMVRNVLRASGCPMHMLNM 245
Query: 234 LMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMI 289
++ + HE WP+GL +L+ R+ N+R+ YV + +P K VVVL DN H+PE++
Sbjct: 246 MVDHCHEDRWPEGLMTLDDRRENQRRMSQYVTRLVPGLVTGKPCVVVLAGDNTHMPENLR 305
Query: 290 SAPGLVMIFAHGIE 303
+ GLVMIF G++
Sbjct: 306 PSLGLVMIFVDGVD 319
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L + C + GCT + L+ + +H+ CEHNPK V+C +GCG IP DE+
Sbjct: 79 LKMKCTFSQSGCTQMLALEEFRTHVAACEHNPKVVVECSKGCGMKIPKDEM 129
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ V EEP+Q C
Sbjct: 1 MGFDMNCIVGHVDEELICPICTDVLEEPVQSSQC 34
>gi|195351375|ref|XP_002042210.1| GM25378 [Drosophila sechellia]
gi|195579036|ref|XP_002079368.1| GD22050 [Drosophila simulans]
gi|194124034|gb|EDW46077.1| GM25378 [Drosophila sechellia]
gi|194191377|gb|EDX04953.1| GD22050 [Drosophila simulans]
Length = 332
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ + HNCV ELR +V K +++ +++ + ++ Q + +R++ + Q + A++ +
Sbjct: 124 VPKDEMSRHNCVFELRELVEKLVKEVSDLKLKNADMEEQNSSQRREMELFQYYIAALRST 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R + E ++R + +W N L A V WG +ISTPD + M++ L ESGCP H+L
Sbjct: 184 NPMLRNIGEQLDRFSLMQWGNGLRLATVHTWGSLISTPDNPMHLMVRDVLRESGCPMHML 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPED 287
+ L+ HE WP+GL +L+ R+ N+ YV + +P K VVVL DN H+PE+
Sbjct: 244 NMLVDRCHEDRWPEGLMTLDDRRENQHLMSQYVTRLVPGLVTGKPCVVVLGGDNTHMPEN 303
Query: 288 MISAPGLVMIFAHGI 302
+ GLVMIF G+
Sbjct: 304 LRPILGLVMIFVDGV 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + GC+ + L+ + +H+ CEHNPK V+C +GCG +P DE+
Sbjct: 79 LKIKCIFSQSGCSQMLALEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEM 129
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ V EEP+Q C
Sbjct: 1 MGFDLNCIVGHVDEELICPICTDVLEEPVQSSEC 34
>gi|24584167|ref|NP_609668.2| CG9014 [Drosophila melanogaster]
gi|7298084|gb|AAF53323.1| CG9014 [Drosophila melanogaster]
gi|27819878|gb|AAO24987.1| LP07794p [Drosophila melanogaster]
gi|220950198|gb|ACL87642.1| CG9014-PA [synthetic construct]
Length = 328
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ + HNCV ELR +V K +++ +++ + S+ Q + +R++ + Q + A++ +
Sbjct: 124 VPKDEMSRHNCVFELRELVEKLAKEVSDLKQKQSDMEEQSSSQRREMELFQYYIAALRST 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R + E ++R + +W + L A + WG +ISTPD + M++ L ESGCP H+L
Sbjct: 184 NPMLRNIGEQLDRFSLMQWGHGLPLANIHTWGSLISTPDNPMHLMVRDVLRESGCPMHML 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPED 287
+ L+ HE WP+GL +L+ R+ N+ YV + +P K VVVL +N H+PE+
Sbjct: 244 NMLVERCHEDRWPEGLMTLDDRRENQHLMSRYVTRLVPGLVIGKPCVVVLGGENTHMPEN 303
Query: 288 MISAPGLVMIFAHGI 302
+ GLVMIF G+
Sbjct: 304 LRPILGLVMIFVDGV 318
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + GC + L+ + +H+ CEHNPK V+C +GCG +P DE+
Sbjct: 79 LKIKCTFSQSGCAQMLALEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEM 129
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ V EEP+Q C
Sbjct: 1 MGFDLNCIVGHVDEELICPICTDVLEEPVQSSEC 34
>gi|195427962|ref|XP_002062044.1| GK16866 [Drosophila willistoni]
gi|194158129|gb|EDW73030.1| GK16866 [Drosophila willistoni]
Length = 361
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 70/306 (22%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C A GC ++LD + H+ CEHNPK V+C GCG +P DE+
Sbjct: 79 LRIKCVFAENGCEQLLQLDEFRRHVDTCEHNPKVVVECPMGCGMKVPKDEMA-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
SH EL E Q
Sbjct: 131 ----SHNCVFELR----------------------------------------EMMQQQQ 146
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
+ EL+ + QQQ++ + E L +LQ + A++ +NP +R + +
Sbjct: 147 TEITELKDLQVTQQQRVESHRRE--------------LELLQYYILALRSTNPVMRNIGD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
++R + +W + L A + WG +ISTPD+ + ++ L+ CP H+++++ HE
Sbjct: 193 QLDRYSLMQWGSVLPAATIRNWGSLISTPDIFMHMRVRDGLSSCSCPMHLINKIADRCHE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLVM 296
WP GL SLE R+ N+ + ++ + +P K VVVL DN+H+PE++ GL+M
Sbjct: 253 DRWPNGLISLEARRENQDSFVDFSTRLLPFLVTGKSCVVVLGGDNLHMPENLRPKLGLIM 312
Query: 297 IFAHGI 302
IF G+
Sbjct: 313 IFVDGV 318
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ V E+P+Q +C
Sbjct: 1 MGFDLTCIVGNVDEELICPICTEVLEDPMQSSSC 34
>gi|195437224|ref|XP_002066541.1| GK24545 [Drosophila willistoni]
gi|194162626|gb|EDW77527.1| GK24545 [Drosophila willistoni]
Length = 323
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ + HNCV LR +V KQ+ +++ ++ ++ Q +++ +R+L ++Q + ++ +
Sbjct: 124 VPKDEMPRHNCVVNLRELVTKQRDEVIRIKEALASQHQRISYHRRELELVQHYITGLRYT 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
N V + + +ER + +W N+L A +T WG +ISTPD+ L I+ L S CP +++
Sbjct: 184 NSVVGNIGDQLERFSLMQWGNNLRLAHITNWGSLISTPDIFLHMRIRDGLGASSCPLNLI 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPED 287
+++ HE WP+GL +L TR+ N + YV + +P K VV+L CDN H+PE+
Sbjct: 244 NKIADRCHEERWPEGLLNLNTRRENHHRLMLYVTRILPIFMTGKSCVVMLGCDNTHMPEN 303
Query: 288 MISAPGLVMIFAHGI 302
+ G+ MIF G+
Sbjct: 304 LRPGVGMAMIFDDGV 318
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C GC ++L+ + SHL C+HNPK ++C +GCG +P DE+
Sbjct: 79 LKIKCCYFENGCAEVLELEDFRSHLASCDHNPKMDIRCTKGCGMKVPKDEM 129
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I IG DEELIC IC+ + E P+Q C
Sbjct: 1 MGFDIALIIGRTDEELICPICTDILESPVQSPLC 34
>gi|195472683|ref|XP_002088629.1| GE11492 [Drosophila yakuba]
gi|194174730|gb|EDW88341.1| GE11492 [Drosophila yakuba]
Length = 332
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 116/196 (59%), Gaps = 4/196 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ + HNCV ELR V + +++ +++ + + + + +R+L + Q + A++ +
Sbjct: 124 VPKDEMSRHNCVFELRERVEQLVKEVSDLKQKQEDLEVENSSQRRELELFQYYIAALRST 183
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
NP +R + + ++R + +W N L A V WG +ISTPD + M++ L SGCP H+L
Sbjct: 184 NPVMRNIGDQLDRYSLMQWGNGLRLATVHTWGSLISTPDTPMHHMVRDVLRASGCPMHML 243
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPED 287
+ ++ HE WP+GL +L+ R+ N+ + YV + +P K VVVL DN H+PE+
Sbjct: 244 NMMVDRCHEDRWPEGLMTLDDRRENQHRMSEYVTRLVPGLVTGKPCVVVLAGDNSHMPEN 303
Query: 288 MISAPGLVMIFAHGIE 303
+ + GLVMIF G++
Sbjct: 304 LRPSLGLVMIFVDGVD 319
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + GC + L+ + +H+ CEHNPK V+C +GCG +P DE+
Sbjct: 79 LKIKCTFSQSGCAQMLSLEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEM 129
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG+++ +G VDEELIC IC+ V EEP+Q C
Sbjct: 1 MGFDVNCIVGHVDEELICPICTDVLEEPVQSAEC 34
>gi|312380124|gb|EFR26208.1| hypothetical protein AND_07853 [Anopheles darlingi]
Length = 438
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 79/97 (81%)
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRV 177
+DHNC +ELRS+VH QQQKM ++ E+++Q + ELKR+L ++++ MRAM+VSNP +R
Sbjct: 317 KDHNCFRELRSLVHSQQQKMGELKNEINDQNLVINELKRELNLVKDFMRAMRVSNPAMRA 376
Query: 178 LAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQ 214
+A+ MERD+V RWSN L+RARVTRWGGMISTPD LQ
Sbjct: 377 IADQMERDEVTRWSNGLARARVTRWGGMISTPDDALQ 413
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 52 KYLSNQCEYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSG 111
K +++ E + L + T + ++ MGY++ RF G+VDEELIC ICSG
Sbjct: 151 KRITSAAEKQTEEEIARGLRVEIATAHHPNQSSLLWRMGYDLTRFQGDVDEELICPICSG 210
Query: 112 VFEEPLQDHNC 122
V EEPLQ C
Sbjct: 211 VLEEPLQAVAC 221
>gi|195053293|ref|XP_001993561.1| GH13876 [Drosophila grimshawi]
gi|193900620|gb|EDV99486.1| GH13876 [Drosophila grimshawi]
Length = 336
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 70/307 (22%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I C + GC+ + L+ Y H+ C+ NPK V C +GCG +P DE+
Sbjct: 79 LKIKCCFSENGCSALMPLEQYRRHVENCQSNPKVEVLCTKGCGMKVPKDEMF-------- 130
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H LEL +Q
Sbjct: 131 ----RHNCVLELRLQLQHQL---------------------------------------- 146
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
+ + +L+ + +Q+Q++V +R+L +LQ + ++ +NP +R + +
Sbjct: 147 SALSQLQQMQSRQEQRLVQQ--------------RRELEMLQHYIATLRATNPVIRTVGD 192
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSHE 240
++R + RW SL A V WG +ISTPD + ++ L SGCP ++ L+ S+E
Sbjct: 193 QLDRYWLMRWGRSLPLASVRTWGSLISTPDSTMVQTVREGLRASGCPMRLMGMLLDCSYE 252
Query: 241 RNWPQGLSSLETRQNNRRQYENYVCKRIP----SKQAVVVLLCDNVHLPEDMISAPGLVM 296
+WP GLS+LE R+ N+ + +V + +P + V++L DN H+P+++ A G+V+
Sbjct: 253 ESWPDGLSTLEMRRMNQHRLAQFVTRLLPIGITGRPCVILLGGDNAHMPDNLRPALGIVI 312
Query: 297 IFAHGIE 303
IF +G++
Sbjct: 313 IFINGVD 319
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++ +G VDEEL+C IC+ V EEPLQ C
Sbjct: 1 MGFDQSLIVGHVDEELLCPICADVLEEPLQSSGC 34
>gi|198476230|ref|XP_001357310.2| GA21478 [Drosophila pseudoobscura pseudoobscura]
gi|198137600|gb|EAL34379.2| GA21478 [Drosophila pseudoobscura pseudoobscura]
Length = 327
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 110/196 (56%), Gaps = 4/196 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ L DHNC+ ELR IV Q ++ ++ + ++ R+L +LQ + A++ +
Sbjct: 123 VPKDELPDHNCIIELRKIVQDQATEIAVLKHTQVDHEIRIGVQIRELELLQYYLAALRST 182
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
+P +R + ++ V+ W L ARV WG ++STPD + +++ SL SGCP H+L
Sbjct: 183 SPIMRNVGNQLDGYAVSHWCAGLPTARVNNWGSVVSTPDNEMHFLVRNSLRASGCPMHLL 242
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRI----PSKQAVVVLLCDNVHLPED 287
+ ++ + HE WP +++L+ R+ N+ Q +V + I +Q + + DN H+PE+
Sbjct: 243 NTMVEHCHEERWPAAMATLQRRRANQAQMTQFVSRLIRPLSSGRQCLCIFGVDNYHVPEN 302
Query: 288 MISAPGLVMIFAHGIE 303
+ G+ MIF G+E
Sbjct: 303 LRPFLGITMIFVDGVE 318
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I IG VDEELIC IC+ V E P+Q +C
Sbjct: 1 MGFDINYIIGHVDEELICPICTDVLETPVQSLHC 34
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + C + + LD Y +H+ C+ NPK V+C + C +P DEL
Sbjct: 79 LQIRCPFSENDCPLILSLDDYRAHVLICQFNPKAIVEC-KNCLMKVPKDEL 128
>gi|148697236|gb|EDL29183.1| mCG1035426 [Mus musculus]
Length = 286
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 67/269 (24%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDN +GC+ V+LD+ SHL+ CE+N K+PV CEQGCG IP +EL ++ C
Sbjct: 79 LKIACDNTVFGCSARVRLDNLMSHLSVCEYNLKQPVTCEQGCGLEIPKNELP--NHNCIK 136
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
H +R + + + LI +
Sbjct: 137 H--------------------------------LRSVFQQQQTLISEL------------ 152
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
E S HK Q ++EQ+ ++ +++ MR + NP ++ L E
Sbjct: 153 ----EKTSAEHKHQ---------LAEQKHEI-------KLMKAYMRKIHRVNPNLQNLEE 192
Query: 181 NMERDDVARWSNS-LSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHILDQLMHNSH 239
+E +++ W NS A T WGGMIS+PD +LQ +I S ESG P ++L N+H
Sbjct: 193 IIEYNEILEWLNSPQPPATETNWGGMISSPDTVLQTVINHSTVESGSPTSPGNELSENAH 252
Query: 240 ERNWPQGLSSLETRQNNRRQYENYVCKRI 268
E + QG+++LETRQ N+ YENY+ + +
Sbjct: 253 EYSESQGVATLETRQMNQHYYENYMTRTL 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G +DE+LIC IC+GV E+P+Q +C
Sbjct: 1 MGYDVTRFQGFIDEDLICPICNGVLEDPVQAPHC 34
>gi|195185099|ref|XP_002029251.1| GL15421 [Drosophila persimilis]
gi|194114724|gb|EDW36767.1| GL15421 [Drosophila persimilis]
Length = 314
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVS 171
V ++ L DHNC+ ELR IV Q ++ ++ + ++ R+L +LQ + A++ +
Sbjct: 123 VPKDELPDHNCIIELRKIVQDQATEISVLKHTQVDHEIRIGVQIRELELLQYYLAALRST 182
Query: 172 NPGVRVLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGCPGHIL 231
+P +R + ++ V+ W L ARV WG ++STPD + +++ SL SGCP H+L
Sbjct: 183 SPIMRNVGNQLDGYAVSHWCAGLPTARVNNWGSVVSTPDNEMHFLVRNSLRASGCPMHLL 242
Query: 232 DQLMHNSHERNWPQGLSSLETRQNNRRQYENYVCKRI----PSKQAVVVLLCDNVHLPED 287
+ ++ + HE WP +++L+ R+ N+ Q +V + I +Q + + DN H+PE+
Sbjct: 243 NTMVEHCHEERWPAAMATLQRRRANQTQMTQFVSRLIRPLSSGRQCLCIFGVDNYHVPEN 302
Query: 288 MISAPGLVMIFA 299
+ G+ MIF
Sbjct: 303 LRPFLGITMIFV 314
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I IG VDEELIC IC+ V E P+Q +C
Sbjct: 1 MGFDINYIIGHVDEELICPICTDVLETPVQSLHC 34
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + C + + LD Y +H+ C+ NPK V+C + C +P DEL
Sbjct: 79 LQIRCPFSENDCPLIMSLDDYRAHVLICQFNPKAIVEC-KNCLMKVPKDEL 128
>gi|260807267|ref|XP_002598430.1| hypothetical protein BRAFLDRAFT_123398 [Branchiostoma floridae]
gi|229283703|gb|EEN54442.1| hypothetical protein BRAFLDRAFT_123398 [Branchiostoma floridae]
Length = 555
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L I CDNA++GC+ +KLD +SHL ECEHNPKRPV CEQGCG VIP DELK
Sbjct: 79 LYIKCDNANFGCSQVIKLDQLASHLDECEHNPKRPVSCEQGCGLVIPKDELK 130
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSN-PGV 175
L+DHNCV+ELR++V +QQ K+ ++E++EQ+ + + KR++ +L+E MRA++ SN P
Sbjct: 129 LKDHNCVRELRTVVSQQQVKLSEFQSELAEQKRMIQDQKREIQMLKEYMRAIRASNQPLT 188
Query: 176 RVLAENMERDDVA 188
R + + ME D+V
Sbjct: 189 RAIEDQMESDEVG 201
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY++ RF G VDEEL+C IC GV EEP+Q C
Sbjct: 1 MGYDVNRFEGNVDEELLCPICGGVLEEPVQAPQC 34
>gi|395543087|ref|XP_003773454.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Sarcophilus
harrisii]
Length = 239
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 92/226 (40%), Gaps = 72/226 (31%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQCEY 60
L I+CDNA GC ++LD+ +HL CEH+PK PV C+
Sbjct: 79 LQITCDNAVAGCNAILRLDNLMAHLLNCEHSPKCPVACK--------------------- 117
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVFEEPLQDH 120
HG LE+S GE L +H
Sbjct: 118 -----HGCGLEMSN-----------------------GE-----------------LPNH 132
Query: 121 NCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAE 180
NC++ L S+V +Q+ + +E +EQ+FQ+ E +R + +L+ + A+ P +R
Sbjct: 133 NCIEHLHSMVQQQETHITELEKTSAEQKFQLEEQQRDIQLLKAYVHALHNDKPKLRP--- 189
Query: 181 NMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESGC 226
E ++ +W NSL V S+P Q + ++ AES C
Sbjct: 190 --ESSEIIQWVNSLHPEGVPSGEDGSSSPGPT-QPPVPKTSAESAC 232
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGY+ RF+G+VDE+LIC IC GV EEP+Q NC
Sbjct: 1 MGYDRARFLGDVDEDLICPICCGVLEEPVQAPNC 34
>gi|443700663|gb|ELT99533.1| hypothetical protein CAPTEDRAFT_128127 [Capitella teleta]
Length = 191
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK 52
L ISCDN S+GCT +KLD +HL ECE NPK PV CE GCG V+P DEL+
Sbjct: 79 LEISCDNVSFGCTAVLKLDVLVNHLQECEFNPKMPVHCELGCGLVVPKDELQ 130
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MGYE+ RF VDEEL+C ICSGV EEPLQ NC
Sbjct: 1 MGYEVARFSATVDEELVCPICSGVLEEPLQAPNC 34
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 39/51 (76%)
Query: 112 VFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQ 162
V ++ LQ HNCV+ELR+++ +QQ K+ +++TE +E + Q EL+R++ +L+
Sbjct: 124 VPKDELQTHNCVRELRTLMQQQQTKISDLQTEGAELKVQTAELRREIQLLK 174
>gi|313236181|emb|CBY11505.1| unnamed protein product [Oikopleura dioica]
Length = 226
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 92 EIVRFIGEVDEELICSI-----------CSGVFEEPLQDHNCVKELRSIVHKQQQKMVNM 140
EIVR D C C + + L +HNC+++LR + ++ +
Sbjct: 93 EIVRLDSRADHSANCEFNPKRPIRCEQCCLTIPKNELDNHNCIRDLRKQMAMINDQVTEL 152
Query: 141 ETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLAENMERDDVARWSNSLSRARVT 200
+ SEQ+ + ++ RQ+ L+EL+R +P E + W+ SL+ ARVT
Sbjct: 153 KKNQSEQQNRDRDMMRQIVHLRELVRLNHAPSPRTPTQPRITE---IINWAESLNSARVT 209
Query: 201 RWGGMISTPDVMLQAMI 217
RWGG+ISTPD +LQ +I
Sbjct: 210 RWGGVISTPDSVLQRVI 226
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L + C+N +GC V+LDS + H CE NPKRP++CEQ C + IP +EL
Sbjct: 80 LRVKCENKEHGCKEIVRLDSRADHSANCEFNPKRPIRCEQCCLT-IPKNEL 129
>gi|326917905|ref|XP_003205235.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Meleagris
gallopavo]
Length = 288
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+I RF+G V+E L+CSIC V E+PLQ
Sbjct: 1 MGYDIERFVGYVNEGLLCSICRDVLEDPLQ 30
>gi|50731710|ref|XP_418336.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1 [Gallus gallus]
Length = 288
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+I RF+G V+E L+CSIC V E+PLQ
Sbjct: 1 MGYDIERFVGYVNEGLLCSICRDVLEDPLQ 30
>gi|449494441|ref|XP_004175306.1| PREDICTED: E3 ubiquitin-protein ligase NRDP1-like [Taeniopygia
guttata]
Length = 287
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+I RF+G V+E L+CSIC V E+PLQ
Sbjct: 1 MGYDIERFVGYVNEGLLCSICRDVLEDPLQ 30
>gi|449284113|gb|EMC90694.1| E3 ubiquitin-protein ligase NRDP1, partial [Columba livia]
Length = 244
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+I RF+G V+E L+CSIC V E+PLQ
Sbjct: 1 MGYDIERFVGYVNEGLLCSICRDVLEDPLQ 30
>gi|291223901|ref|XP_002731943.1| PREDICTED: ring finger protein 41-like [Saccoglossus kowalevskii]
Length = 275
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+I RF+G+V+E L+C IC V E+PLQ
Sbjct: 1 MGYDIERFLGQVNEGLLCCICRDVLEDPLQ 30
>gi|390339752|ref|XP_780965.3| PREDICTED: E3 ubiquitin-protein ligase PDZRN3-like
[Strongylocentrotus purpuratus]
Length = 1145
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG++I RF G VDE+ CSIC GV E PL
Sbjct: 1 MGFDIDRFSGPVDEDFKCSICLGVLENPL 29
>gi|195156101|ref|XP_002018939.1| GL25685 [Drosophila persimilis]
gi|194115092|gb|EDW37135.1| GL25685 [Drosophila persimilis]
Length = 193
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNC 122
MG++I IG VDEELIC IC+ V E P+Q +C
Sbjct: 1 MGFDINYIIGHVDEELICPICTDVLETPVQSLHC 34
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDEL 51
L I C + C + + LD Y +H+ C+ NPK V+C + C +P DEL
Sbjct: 79 LQIRCPFSENDCPLILSLDDYRAHVLICQFNPKAIVEC-KNCLMKVPKDEL 128
>gi|156386717|ref|XP_001634058.1| predicted protein [Nematostella vectensis]
gi|156221136|gb|EDO41995.1| predicted protein [Nematostella vectensis]
Length = 293
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MGY+I RF+G V+E L+C IC V EEPL
Sbjct: 1 MGYDIERFVGAVNEGLLCCICRDVLEEPL 29
>gi|327269549|ref|XP_003219556.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1-like [Anolis
carolinensis]
Length = 288
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY+ RF+G V+E L+CSIC V EE LQ
Sbjct: 1 MGYDTERFVGYVNEGLLCSICRDVLEEALQ 30
>gi|296188220|ref|ZP_06856612.1| uncharacterized domain HDIG containing protein [Clostridium
carboxidivorans P7]
gi|296047346|gb|EFG86788.1| uncharacterized domain HDIG containing protein [Clostridium
carboxidivorans P7]
Length = 352
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 17/193 (8%)
Query: 49 DELKYLSNQCEY--HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELIC 106
+ K + N EY + D + E+S Y +H +TAIM + R + EEL
Sbjct: 94 ESFKIVENLAEYIAEEGDMNTNLYEISRYDNYTYIHCVDTAIMSIFLGRSLNLKKEELTE 153
Query: 107 SICSGVFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMR 166
S + L D +K I++K++ ++ + F+ E+K+ E+++
Sbjct: 154 LGISAI----LHDIGKIKISNGIINKKEP--------LTAEEFE--EIKKHPVYGYEILK 199
Query: 167 AMKVSNPGVR-VLAENMERDDVARWSNSLSRARVTRWGGMISTPDVMLQAMIKRSLAESG 225
++N + +AE+ ER D + N +S ++ + +IS DV R+ E
Sbjct: 200 EAGINNKNILCAVAEHHERVDGQGYPNGISGDKIWYYAKIISVCDVFTALSANRAYRERF 259
Query: 226 CPGHILDQLMHNS 238
P + ++ N+
Sbjct: 260 NPNEAYEYIISNA 272
>gi|292622325|ref|XP_002664951.1| PREDICTED: e3 ubiquitin-protein ligase NRDP1 [Danio rerio]
Length = 292
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY++ RF+G V+E L+C +C V E+PLQ
Sbjct: 1 MGYDLERFVGYVNEGLLCCVCRDVLEDPLQ 30
>gi|397489685|ref|XP_003815851.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Pan paniscus]
Length = 1123
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 86 TAIMGYEIVRFIGEVDEELICSICSGVFEEPL 117
A MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 95 AATMGFELDRFDGDVDPDLKCALCHKVLEDPL 126
>gi|260797887|ref|XP_002593932.1| hypothetical protein BRAFLDRAFT_98231 [Branchiostoma floridae]
gi|229279164|gb|EEN49943.1| hypothetical protein BRAFLDRAFT_98231 [Branchiostoma floridae]
Length = 257
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MG++I RF+G V+E L+C +C V E+PLQ
Sbjct: 1 MGFDIERFVGTVNEGLLCCVCRDVLEDPLQ 30
>gi|5689527|dbj|BAA83047.1| KIAA1095 protein [Homo sapiens]
Length = 1098
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 86 TAIMGYEIVRFIGEVDEELICSICSGVFEEPL 117
A MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 30 AATMGFELDRFDGDVDPDLKCALCHKVLEDPL 61
>gi|404247474|ref|NP_001258180.1| E3 ubiquitin-protein ligase PDZRN3 [Rattus norvegicus]
Length = 1063
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGEVDPDLKCALCHKVLEDPL 29
>gi|62288872|sp|P68907.1|PZRN3_RAT RecName: Full=E3 ubiquitin-protein ligase PDZRN3; AltName: Full=PDZ
domain-containing RING finger protein 3; AltName:
Full=Semaphorin cytoplasmic domain-associated protein 3;
Short=Protein SEMACAP3
Length = 1062
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGEVDPDLKCALCHKVLEDPL 29
>gi|47225439|emb|CAG11922.1| unnamed protein product [Tetraodon nigroviridis]
Length = 341
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQ 118
MGY++ RF+G V+E L+C +C V E PLQ
Sbjct: 1 MGYDLERFVGYVNEGLLCCVCRDVLERPLQ 30
>gi|301618030|ref|XP_002938430.1| PREDICTED: PDZ domain-containing RING finger protein 3-like isoform
2 [Xenopus (Silurana) tropicalis]
Length = 1033
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 51/170 (30%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN S GC VKL S + H C+ + P +C +GC V+ + ++ ++ +C
Sbjct: 77 LDIKCDNYSRGCDKVVKLQSLAEHAEMCDFS---PAKCRNKGCNEVLNLRDMDAHMRERC 133
Query: 59 EYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVF----E 114
+Y R G IC G+ E
Sbjct: 134 DY----------------------------------RAAG------ICQKGCGLMITHQE 153
Query: 115 EPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQEL 164
L +H C+K L+ + + Q K+ +ETE+ ++ + + KR+ ++L +L
Sbjct: 154 HRLGEHCCLKALKGLNNVLQSKISGLETELKKRALRSS--KREKSLLSQL 201
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD + C++C+ V E+PL
Sbjct: 1 MGFELDRFSGEVDPDFKCNLCNRVLEDPL 29
>gi|301618028|ref|XP_002938429.1| PREDICTED: PDZ domain-containing RING finger protein 3-like isoform
1 [Xenopus (Silurana) tropicalis]
Length = 1062
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 51/170 (30%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN S GC VKL S + H C+ + P +C +GC V+ + ++ ++ +C
Sbjct: 77 LDIKCDNYSRGCDKVVKLQSLAEHAEMCDFS---PAKCRNKGCNEVLNLRDMDAHMRERC 133
Query: 59 EYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVF----E 114
+Y R G IC G+ E
Sbjct: 134 DY----------------------------------RAAG------ICQKGCGLMITHQE 153
Query: 115 EPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQEL 164
L +H C+K L+ + + Q K+ +ETE+ ++ + + KR+ ++L +L
Sbjct: 154 HRLGEHCCLKALKGLNNVLQSKISGLETELKKRALRSS--KREKSLLSQL 201
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD + C++C+ V E+PL
Sbjct: 1 MGFELDRFSGEVDPDFKCNLCNRVLEDPL 29
>gi|118097094|ref|XP_414432.2| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Gallus gallus]
Length = 1060
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD + C++C+ V E+PL
Sbjct: 1 MGFELDRFSGEVDPDFKCNLCNKVLEDPL 29
>gi|338732327|ref|YP_004670800.1| putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate
coenzyme A ligase [Simkania negevensis Z]
gi|336481710|emb|CCB88309.1| putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate
coenzyme A ligase [Simkania negevensis Z]
Length = 419
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 52 KYLSNQCEYHQH------DSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELI 105
+ ++ EYH++ D G D L F +P+Q+ T +I G + FI E +
Sbjct: 104 RLVTEHLEYHRNVEEKLADLLGKDSSLLFSSPFQAKQTLFGSIGGSRAIFFIDRFCENSL 163
Query: 106 CSICSGVFEEPLQ-DHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQEL 164
SG + L+ +H +K+LR+++ K + + +SE F + L L EL
Sbjct: 164 MQAASGSQSKLLRYEHQNLKQLRTLLEKHRDTSCTTKVIISESLFGLNGENGDLKGLIEL 223
Query: 165 MR 166
R
Sbjct: 224 AR 225
>gi|403220664|dbj|BAM38797.1| structural maintenance of chromosome protein, type 1 [Theileria
orientalis strain Shintoku]
Length = 1460
Score = 40.8 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 120 HNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVRVLA 179
+N + E RS V + + ++ET+M + +M EL+RQLT ++ + +K SN V
Sbjct: 928 NNALSEKRSTVSRYDSDLKDLETKMEASKNKMGELERQLTKCRKELEKLKESNANV---C 984
Query: 180 ENMER 184
E MER
Sbjct: 985 EEMER 989
>gi|148227240|ref|NP_001090510.1| PDZ domain containing ring finger 3 [Xenopus laevis]
gi|50417458|gb|AAH77302.1| Pdzrn3 protein [Xenopus laevis]
Length = 1029
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD + C++C+ V E+PL
Sbjct: 1 MGFELDRFNGEVDPDFKCNLCNRVLEDPL 29
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 51/170 (30%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN S GC VKL S + H C+ + P +C +GC V+ + ++ ++ C
Sbjct: 77 LDIKCDNYSRGCDKVVKLHSLAEHAEMCDFS---PAKCRNKGCSEVLNLRDMDAHMREHC 133
Query: 59 EYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVF----E 114
+Y R G IC G+ E
Sbjct: 134 DY----------------------------------RAAG------ICQKGCGLMITHRE 153
Query: 115 EPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQEL 164
L +H C+K L+ + Q K+ +ETE+ ++ + KR+ ++L +L
Sbjct: 154 HRLGEHCCLKALKGLNSVLQSKISGLETELKKRALRSG--KREKSLLSQL 201
>gi|291244164|ref|XP_002741954.1| PREDICTED: KIAA1095 protein-like [Saccoglossus kowalevskii]
Length = 1103
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MGY+I RF ++E L CS+C GV E+PL
Sbjct: 1 MGYDIERFCETIEENLKCSVCLGVLEDPL 29
>gi|373838784|ref|NP_001243321.1| PDZ domain-containing RING finger protein 3 [Danio rerio]
gi|344953336|gb|AEN28595.1| PDZ domain-containing ring finger 3 [Danio rerio]
Length = 1053
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 51/170 (30%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN + GC VKL + H C+++ P +C +GC V+ + ++ ++ C
Sbjct: 77 LDIKCDNHARGCEKIVKLQHLAEHAEMCDYS---PAKCRNKGCSEVLNLKDMDAHMRESC 133
Query: 59 EYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSGVF----E 114
+Y R +G IC G+ E
Sbjct: 134 DY----------------------------------RAVG------ICESGCGLMLTHKE 153
Query: 115 EPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQEL 164
L +H C+K L++ Q K+V ++ E+ +Q + T KR+ ++L +L
Sbjct: 154 HKLDNHCCLKALKAHNGALQGKVVTLDKELKKQALKST--KREKSLLAQL 201
>gi|345786351|ref|XP_003432813.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Canis lupus
familiaris]
Length = 1118
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 7/42 (16%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQD-------HNCV 123
MG+E+ RF G+VD +L C++C V E+PL H CV
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFRHGCV 42
>gi|301757719|ref|XP_002914710.1| PREDICTED: PDZ domain-containing RING finger protein 3-like
[Ailuropoda melanoleuca]
Length = 1066
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 49 MGFELDRFDGDVDPDLKCALCHKVLEDPL 77
>gi|326679015|ref|XP_001921128.2| PREDICTED: e3 ubiquitin-protein ligase PDZRN3-like [Danio rerio]
Length = 1034
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+++ RF G VD +LIC +C V E+PL
Sbjct: 1 MGFDLDRFEGPVDPDLICKLCGKVLEDPL 29
>gi|301072281|gb|ADK56111.1| PDZ domain containing RING finger 3A [Mus musculus]
Length = 1030
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|256985136|ref|NP_061372.2| E3 ubiquitin-protein ligase PDZRN3 [Mus musculus]
gi|306526270|sp|Q69ZS0.3|PZRN3_MOUSE RecName: Full=E3 ubiquitin-protein ligase PDZRN3; AltName: Full=PDZ
domain-containing RING finger protein 3; AltName:
Full=Semaphorin cytoplasmic domain-associated protein 3;
Short=Protein SEMACAP3
Length = 1063
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|6651019|gb|AAF22131.1|AF127084_1 semaphorin cytoplasmic domain-associated protein 3A [Mus musculus]
Length = 1063
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|395733534|ref|XP_002813562.2| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Pongo abelii]
Length = 1066
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|6651021|gb|AAF22132.1|AF127085_1 semaphorin cytoplasmic domain-associated protein 3B [Mus musculus]
Length = 1011
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|426341231|ref|XP_004035952.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Gorilla gorilla
gorilla]
Length = 1066
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|395824575|ref|XP_003785538.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Otolemur garnettii]
Length = 1062
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|403297275|ref|XP_003939500.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|297285394|ref|XP_001098466.2| PREDICTED: PDZ domain-containing RING finger protein 3-like [Macaca
mulatta]
Length = 1066
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|297488521|ref|XP_002697002.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 isoform 2 [Bos
taurus]
gi|296474991|tpg|DAA17106.1| TPA: KIAA1095 protein-like isoform 2 [Bos taurus]
Length = 1061
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|187956215|gb|AAI50624.1| PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|57529737|ref|NP_055824.1| E3 ubiquitin-protein ligase PDZRN3 [Homo sapiens]
gi|62288903|sp|Q9UPQ7.2|PZRN3_HUMAN RecName: Full=E3 ubiquitin-protein ligase PDZRN3; AltName:
Full=Ligand of Numb protein X 3; AltName: Full=PDZ
domain-containing RING finger protein 3; AltName:
Full=Semaphorin cytoplasmic domain-associated protein 3;
Short=Protein SEMACAP3
gi|156230141|gb|AAI52418.1| PDZ domain containing ring finger 3 [Homo sapiens]
gi|168269682|dbj|BAG09968.1| PDZ domain-containing RING finger protein 3 [synthetic construct]
Length = 1066
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|297463561|ref|XP_585971.4| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 isoform 2 [Bos
taurus]
Length = 1061
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|297463559|ref|XP_002702795.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 isoform 1 [Bos
taurus]
Length = 1065
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|297488519|ref|XP_002697001.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 isoform 1 [Bos
taurus]
gi|296474990|tpg|DAA17105.1| TPA: KIAA1095 protein-like isoform 1 [Bos taurus]
Length = 1065
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|426249848|ref|XP_004018660.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3
[Ovis aries]
Length = 1049
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|114587889|ref|XP_516586.2| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 isoform 4 [Pan
troglodytes]
gi|410208522|gb|JAA01480.1| PDZ domain containing ring finger 3 [Pan troglodytes]
gi|410256906|gb|JAA16420.1| PDZ domain containing ring finger 3 [Pan troglodytes]
gi|410287958|gb|JAA22579.1| PDZ domain containing ring finger 3 [Pan troglodytes]
gi|410340253|gb|JAA39073.1| PDZ domain containing ring finger 3 [Pan troglodytes]
Length = 1066
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|402859583|ref|XP_003894231.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3 [Papio anubis]
Length = 1066
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|348690423|gb|EGZ30237.1| hypothetical protein PHYSODRAFT_467814 [Phytophthora sojae]
Length = 2360
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 3 ISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELK-YLSNQC 58
+SC N YGC + HLT H KR +QC CG+V+ DEL + S QC
Sbjct: 440 VSCTNFEYGCQDQMLFRDREHHLTH--HCRKRDIQCRLLCGAVVRFDELDGHESAQC 494
>gi|15680171|gb|AAH14432.1| PDZRN3 protein [Homo sapiens]
Length = 360
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|256073213|ref|XP_002572926.1| hypothetical protein [Schistosoma mansoni]
gi|350645686|emb|CCD59661.1| hypothetical protein Smp_130050 [Schistosoma mansoni]
Length = 318
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG I RF+ VDE LIC IC GVF P+
Sbjct: 5 MGIPIDRFVNPVDENLICGICHGVFIIPV 33
>gi|449283520|gb|EMC90136.1| PDZ domain-containing RING finger protein 3, partial [Columba
livia]
Length = 308
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF GEVD + C++C+ V E+PL
Sbjct: 1 MGFELDRFSGEVDPDFKCNLCNKVLEDPL 29
>gi|156392064|ref|XP_001635869.1| predicted protein [Nematostella vectensis]
gi|156222967|gb|EDO43806.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLSNQC 58
L++ C NA GC + +KL+ HL C H PVQC GC + + EL N C
Sbjct: 85 LIVHCPNADNGCKLVLKLEGVEGHLKSCSH---APVQC-CGCSAFLKRGELAEHHNTC 138
>gi|444727040|gb|ELW67548.1| E3 ubiquitin-protein ligase PDZRN3 [Tupaia chinensis]
Length = 234
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG+E+ RF G+VD +L C++C V E+PL
Sbjct: 1 MGFELDRFDGDVDPDLKCALCHKVLEDPL 29
>gi|410920617|ref|XP_003973780.1| PREDICTED: E3 ubiquitin-protein ligase PDZRN3-like [Takifugu
rubripes]
Length = 1042
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN + GC VKL + H CE++ PV+C +GC V+ + ++ ++ C
Sbjct: 77 LEIKCDNHARGCDAVVKLQHLAEHAEMCEYS---PVKCRNKGCSEVLNLGDMDAHMRGTC 133
Query: 59 EY 60
E+
Sbjct: 134 EH 135
>gi|358340974|dbj|GAA39810.2| E3 ubiquitin-protein ligase PDZRN3 [Clonorchis sinensis]
Length = 279
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MG + RF+G VD+ +C+IC GVF P+
Sbjct: 1 MGIPLERFLGHVDDSFLCNICQGVFISPV 29
>gi|390341155|ref|XP_798345.3| PREDICTED: uncharacterized protein LOC593787 [Strongylocentrotus
purpuratus]
Length = 786
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 55/173 (31%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQC-EQGCGSVIPMDELKYLSNQCE 59
L+I C+N +GC +KL+ Y H C+ P++C GCG + + C+
Sbjct: 79 LLIVCENREHGCANGIKLEMYDKHAQNCDF---APIKCLNTGCGQTVLRQNMLAHEQTCK 135
Query: 60 YHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIVRFIGEVDEELICSICSG--VFEEPL 117
Y R I +C G + E L
Sbjct: 136 Y----------------------------------RLI-------MCKKGCGLPISMEKL 154
Query: 118 QDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQM-TELKRQLTVLQELMRAMK 169
+ HNC+ EL++ M ME + ++ + T+L ++ VL++ ++AM+
Sbjct: 155 KKHNCLDELKT-------SMTAMEDQYKQRLLDLETKLNTKIQVLEDRIKAME 200
>gi|317418929|emb|CBN80967.1| PDZ domain-containing RING finger protein 3 [Dicentrarchus labrax]
Length = 1049
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCE-QGCGSVIPMDELK-YLSNQC 58
L I CDN + GC VKL + H CE++ P +C +GC V+ + ++ ++ C
Sbjct: 77 LEIKCDNHARGCDAVVKLQHLAEHAEMCEYS---PAKCRNKGCSEVLTLRDMDAHMRETC 133
Query: 59 EY 60
+Y
Sbjct: 134 DY 135
>gi|156400224|ref|XP_001638900.1| predicted protein [Nematostella vectensis]
gi|156226024|gb|EDO46837.1| predicted protein [Nematostella vectensis]
Length = 133
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPL 117
MGY + +F+G++D+ L+C+IC GV E +
Sbjct: 1 MGYGLNKFVGKIDQNLLCNICVGVLENAI 29
>gi|440494353|gb|ELQ76741.1| putative transporter [Trachipleistophora hominis]
Length = 342
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 48 MDELKYLSNQCEYHQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIV---RFIGEVDEEL 104
M + ++ EY+ H TDLE++F PY S+ + G+ +V +F G ++E
Sbjct: 122 MIVVLFMFEVFEYNGVQLHSTDLEIAFLKPYMSMLFIIVLVYGFRMVLVHKFSGLIEERP 181
Query: 105 ICSICSGVF 113
+C +F
Sbjct: 182 FVPLCHNIF 190
>gi|145223000|ref|YP_001133678.1| N-6 DNA methylase [Mycobacterium gilvum PYR-GCK]
gi|145215486|gb|ABP44890.1| N-6 DNA methylase [Mycobacterium gilvum PYR-GCK]
Length = 494
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 24/142 (16%)
Query: 61 HQHDSHGTDLELSFCTPYQSLHTANTAIMGYEIV-------------RFIGEVDEELICS 107
H+H + G TP Q H + + GYE+V IG D E +
Sbjct: 187 HEHVAEGA----GKLTPTQRSHLRDKFVTGYELVDGTARLAAMNLLLHGIGTADGESLIE 242
Query: 108 ICSGVFEEPLQDHNCVKELRSIVHKQQQKMVNM-------ETEMSEQRFQMTELKRQLTV 160
+ + +P Q + V K MV + E+ Q F +T +QL
Sbjct: 243 VRDALISDPGQRWSVVLSNPPFGRKSSLTMVGADGREARDDVEIERQDFVVTTSNKQLNF 302
Query: 161 LQELMRAMKVSNPGVRVLAENM 182
LQ +M + ++ VL +N+
Sbjct: 303 LQHIMTILDINGRAAVVLPDNV 324
>gi|156365795|ref|XP_001626828.1| predicted protein [Nematostella vectensis]
gi|156213719|gb|EDO34728.1| predicted protein [Nematostella vectensis]
Length = 166
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 89 MGYEIVRFIGEVDEELICSICSGVFEEPLQDHNCVKELRSIVHKQQQKMVNMETEMSEQR 148
MG +I RF+ +V EL+C IC+GV E+P++ + K Q N T S+ R
Sbjct: 1 MGIDIDRFV-DVSPELVCCICTGVLEDPVESPCRHVFCSECISKWLQNNSNCPTCRSQVR 59
Query: 149 FQMTELKRQLTVLQELMRAMKV 170
+ LK L +++ ++ +K+
Sbjct: 60 AK--NLKPVLPLVRNIISKLKI 79
>gi|149183847|ref|ZP_01862242.1| hypothetical protein BSG1_18385 [Bacillus sp. SG-1]
gi|148848446|gb|EDL62701.1| hypothetical protein BSG1_18385 [Bacillus sp. SG-1]
Length = 235
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 117 LQDHNCVKELRSIVHKQQQKMVNMETEMSEQRFQMTELKRQLTVLQELMRAMKVSNPGVR 176
LQ+ N L++ V+++QQK+VN+E E+S+++ L + + +KV PGVR
Sbjct: 58 LQEKNSA--LQTEVYEKQQKLVNIEKELSQEKQIYFNLAEDAEKYRMFLGKVKVQGPGVR 115
Query: 177 V 177
V
Sbjct: 116 V 116
>gi|340377034|ref|XP_003387035.1| PREDICTED: TNF receptor-associated factor 3-like [Amphimedon
queenslandica]
Length = 489
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 8/60 (13%)
Query: 1 LVISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPMDELKYLS--NQC 58
V+SC N +GC+ KL +HL CEHN C Q L+Y S NQC
Sbjct: 93 FVVSCINRKFGCSWEGKLGELGNHLGNCEHNKTECKHCNQA------FSPLEYQSHVNQC 146
>gi|307170553|gb|EFN62761.1| TNF receptor-associated factor 4 [Camponotus floridanus]
Length = 388
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 17/126 (13%)
Query: 2 VISCDNASYGCTVAVKLDSYSSHLTECEHNPKRPVQCEQGCGSVIPM----DELKYLSNQ 57
++ C + GC + +L +HL C+H+ V C CG++IP D LKY Q
Sbjct: 4 IVYCIHHKDGCKWSDELRKLKAHLNTCKHD---AVPCGNKCGAMIPRVLMEDHLKYTCAQ 60
Query: 58 ----CEYHQHDSHGTDLELSFCT-PYQSLHTANTAIMGYEIVRF----IGEVDEELI-CS 107
C++ + G LE T Y+ L+ N M + F +GE + L+ C
Sbjct: 61 RRARCDFCAKEFTGHTLEKHTGTCGYEPLYCENKCGMKVQRRHFGQHKLGECAKRLVACR 120
Query: 108 ICSGVF 113
C+ F
Sbjct: 121 YCNKEF 126
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,539,562,000
Number of Sequences: 23463169
Number of extensions: 172205696
Number of successful extensions: 465576
Number of sequences better than 100.0: 241
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 464973
Number of HSP's gapped (non-prelim): 649
length of query: 303
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 162
effective length of database: 9,050,888,538
effective search space: 1466243943156
effective search space used: 1466243943156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)