RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12907
(949 letters)
>d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal
domain {Penicillium sp. [TaxId: 5081]}
Length = 354
Score = 240 bits (612), Expect = 4e-72
Identities = 77/314 (24%), Positives = 121/314 (38%), Gaps = 32/314 (10%)
Query: 177 IDYERDTFVKDGKPFRYVSGSFHYFRSPR-YYWQDRLRKLRAAGLNAVSTYVEWSFHEPS 235
+ ++ + +G+ SG H +R P + D K++A G N VS YV+W+ E +
Sbjct: 6 VTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGN 65
Query: 236 PGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPNITLRSKD 295
PG + G DL+ F + A + +L RPGPYI AE GG P WL + + LR+ D
Sbjct: 66 PGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQ--RVDGILRTSD 123
Query: 296 EVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSY------TCDKEHMIWLRDQ 349
E Y + + + + I + NGGPIIL Q ENE D +M ++ D
Sbjct: 124 EAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDH 183
Query: 350 MKYYVRDAAVLYTTDGGGVGYLKCT----VPGVYATVDFGAATN------------VSSA 393
+ + D G+ +Y + + +
Sbjct: 184 ARDAGIV-VPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNLPTYF 242
Query: 394 FAAMRTVSPHGPLVNSEYYPGWLTHWGEKIATVDTDPVVKTLQIMLEMK------ANVNF 447
+ SP P E+ G WG + + + A +N
Sbjct: 243 HTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSFGVAFLNL 302
Query: 448 YMFYGGTNFGFTAG 461
YM +GGTN+G
Sbjct: 303 YMIFGGTNWGNLGH 316
Score = 53.7 bits (128), Expect = 5e-08
Identities = 20/150 (13%), Positives = 37/150 (24%), Gaps = 29/150 (19%)
Query: 35 FQVENEMGSY------TCDKEHMIWLRDQMKYYVRDAAVLYTTDGGGVGYLKCT----VP 84
+Q ENE D +M ++ D + + D G+
Sbjct: 155 YQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVV-PFISNDAWAAGHNAPGTGAGAV 213
Query: 85 GVYATVDFGAATN------------VSSAFAAMRTVSPHGPLVNSEYYPGWLTHWGEKIA 132
+Y + + + + SP P E+ G WG
Sbjct: 214 DIYGHDSYPLGFDCANPSTWPSGNLPTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGF 273
Query: 133 TVDTDPVVKTLQIMLEMK------ANVNFY 156
+ + + A +N Y
Sbjct: 274 AKCAALLNHEFERVFYKNDFSFGVAFLNLY 303
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus
thermophilus [TaxId: 274]}
Length = 393
Score = 78.9 bits (193), Expect = 4e-16
Identities = 43/297 (14%), Positives = 88/297 (29%), Gaps = 14/297 (4%)
Query: 204 PRYYWQDRLRKLRAAGLNAVSTYV-EWSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVL 262
P+ W++ R++R AGL+ V W+ EP PG+ ++ L+ + E L V+
Sbjct: 12 PKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWG---WLDEAIATLAAEGLKVV 68
Query: 263 LRPGPYICAERDFGGLPSWLMTIKPNITLR---SKDEVYQHYVNKWFAQLFPRITRFLYG 319
L + P L + R + + V + A+ + YG
Sbjct: 69 LGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYG 128
Query: 320 NGGPIILVQVENEMGSYTCDKEHMIWLRDQMKYYVRDAAVLYTTDGGGVGYLKCTVPGVY 379
+ Q +NE G + + + ++ + + G + L +
Sbjct: 129 GLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGW-------LEARYGTIEALNEAWGTAF 181
Query: 380 ATVDFGAATNVSSAFAAMRTVSPHGPLVNSEYYPGWLTHWGEKIATVDTDPVVKTLQIML 439
+ + + V + +P L + + + +
Sbjct: 182 WSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTHN 241
Query: 440 EMKANVNFYMFYGGTNFGFTAGESRAYLPAPSLPPPKPAPKADYGQIILSPAASIFD 496
M + F + F + +S +P P AA D
Sbjct: 242 FMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHD 298
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon
esculentum) [TaxId: 4081]}
Length = 370
Score = 56.6 bits (135), Expect = 7e-09
Identities = 24/178 (13%), Positives = 53/178 (29%), Gaps = 16/178 (8%)
Query: 184 FVKDGKPFRYVSGSFHYF------RSPRYYWQDRLRKLRAAGLNAVSTY----VEWSFHE 233
F +GK + ++ S R + ++ +N T+ +
Sbjct: 11 FALNGKSLYINGFNAYWLMYIAYDPSTRIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQ 70
Query: 234 PSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWL----MTIKPNI 289
+PG + Q L++ + A + + +++ A W + +
Sbjct: 71 SAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDD 130
Query: 290 TLRSKDEVYQHYVN--KWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIW 345
+ V Y N K IT+ Y + I+ ++ NE +
Sbjct: 131 DFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQ 188
>d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId:
51453]}
Length = 344
Score = 43.4 bits (101), Expect = 8e-05
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 25/191 (13%)
Query: 184 FVKDGKPFRYVSGSFHYF--RSPRYYWQDRLRKLRAAGLNAVSTYV-EWSFHEPSPGQFQ 240
F DGK + + ++ + + ++GL V + +PSPGQ
Sbjct: 12 FNIDGKVGYFAGTNCYWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIW 71
Query: 241 F--------------TGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIK 286
F G Q L+Y ++ A + +L +++ +
Sbjct: 72 FQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNA 131
Query: 287 PNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWL 346
+ Y + Y N I ++ NE C + ++
Sbjct: 132 TTWY--TNTAAQTQYRKYV------QAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQW 183
Query: 347 RDQMKYYVRDA 357
+ YV+
Sbjct: 184 ATSVSQYVKSL 194
>d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 339
Score = 43.0 bits (100), Expect = 1e-04
Identities = 31/259 (11%), Positives = 58/259 (22%), Gaps = 41/259 (15%)
Query: 171 VQRKFEIDYERDTFVKDGKPFRYVSGSFH---YFRSPRYYWQDRLRKLRAAGLNAVSTYV 227
V+ R + +GKP G + + R D+L+ + GLN V
Sbjct: 2 VKATLNSSGGR-QYSVNGKPLLIRGGGYTPDLFLRWNETAAADKLKYVLNLGLNTVRLE- 59
Query: 228 EWSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKP 287
P + F ++A +L + + W +
Sbjct: 60 ----GHIEP-----------DEFFDIADDLGVLTMP----------GWECCDKWEGQVNG 94
Query: 288 NITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLR 347
E R + +I + ++ D+
Sbjct: 95 EEKGEPWVESDYPIAKASMFSEAER-----LRDHPSVISFHIGSDFA---PDRRIEQGYL 146
Query: 348 DQMKYYVRDAAVLYTTDGGGVGYLKCTVPGVYATVDFGAATNVSSAFAAMRTVSPHGPLV 407
D MK V+ T + +
Sbjct: 147 DAMKAADFLLPVIPAASARPSPI---TGASGMKMNGPYDYVPPVYWYDKSQKDRGGAWSF 203
Query: 408 NSEYYPGWLTHWGEKIATV 426
NSE G + + +
Sbjct: 204 NSETSAGVDIPTMDTLKRM 222
>d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida
albicans) [TaxId: 5476]}
Length = 394
Score = 41.8 bits (97), Expect = 3e-04
Identities = 19/156 (12%), Positives = 46/156 (29%), Gaps = 10/156 (6%)
Query: 204 PRYYWQDRLRKLRAAGLNAVSTYV-EWSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVL 262
+ + +++ GLN V + W+F + Q LE L A + ++ V
Sbjct: 66 STWITEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVW 125
Query: 263 LRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGG 322
+ G + + ++ +F + Y +
Sbjct: 126 IDLHGA-------PGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDV- 177
Query: 323 PIILVQVENEMGSYTCDKEHMIWLRDQMKYYVRDAA 358
+I +++ NE + + + +R
Sbjct: 178 -VIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTG 212
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId:
39650]}
Length = 410
Score = 41.3 bits (95), Expect = 4e-04
Identities = 32/231 (13%), Positives = 55/231 (23%), Gaps = 44/231 (19%)
Query: 184 FVKDGKPFRYVSGSFHYFR--------SPRYYWQDRLRKLRAAGLNAVSTYV-------- 227
F GKP+ + Y R L L+A G+N +
Sbjct: 11 FELQGKPYVITGVNMWYAAYLGAPNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEIN 70
Query: 228 --EWSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTI 285
G + T Q L+Y L + D+ V+L + +W+
Sbjct: 71 SAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGE 130
Query: 286 KPNITLR---------------SKDEVYQHYVNKW--FAQLFPRITRFLYGNGGPIILVQ 328
++ Q Y I Y + I+ Q
Sbjct: 131 PVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQ 190
Query: 329 VENEMGSYTCD---------KEHMIWLRDQMKYYVRDAAVLYTTDGGGVGY 370
+ NE + + +K V ++G
Sbjct: 191 LANEPRPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSV 241
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel
(Mytilus edulis) [TaxId: 6550]}
Length = 350
Score = 40.1 bits (92), Expect = 9e-04
Identities = 27/266 (10%), Positives = 60/266 (22%), Gaps = 33/266 (12%)
Query: 184 FVKDGKPFRYVSGSFHYF-----------RSPRYYWQDRLRKLRAAGLNAVSTYVEWSFH 232
+G + + + ++ L +++ G N+V ++
Sbjct: 9 LNYNGHHIFLSGANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGE 68
Query: 233 -------EPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTI 285
T D+ +L A R ++L+ T
Sbjct: 69 STPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFF----------TLWNGAVKQSTH 118
Query: 286 KPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIW 345
L Q Y++ + N + + NE E
Sbjct: 119 YRLNGLMVDTRKLQSYIDHALKPMANA-----LKNEKALGGWDIMNEPEGEIKPGESSSE 173
Query: 346 LRDQMKYYVRDAAVLYTTDGGGVGYLKCTVPGVYATVDFGAATNVSSAFAAMRTVSPHGP 405
++ A + A + V+ M+ +
Sbjct: 174 PCFDTRHLSGSGAGWAGHLYSAQEIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMG 233
Query: 406 LVNSEYYPGWLTHWGEKIATVDTDPV 431
N + G++ T+ V
Sbjct: 234 FHNLYSDHCLVKAGGKQSGTLSFYQV 259
>d1tg7a3 b.18.1.27 (A:849-1011) Beta-galactosidase LacA, domains 4
and 5 {Penicillium sp. [TaxId: 5081]}
Length = 163
Score = 37.5 bits (87), Expect = 0.003
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 824 WSMTQYPLSNLSWIDTAPATNTTKLPV-FYTATFTLN--AEHPKPLDGYVDMSNWAKGV- 879
+ Q P W ++P T TK + FY+ +F L+ + + PL S
Sbjct: 20 FHQPQPPTQ--KWDSSSPFTGLTKPGIRFYSTSFDLDLPSGYDIPLYFNFGNSTSTPAAY 77
Query: 880 ---VFINEHNLGKYWTTLGPQLTLYLP 903
+++N + GKY +GPQ + +P
Sbjct: 78 RVQLYVNGYQYGKYVNNIGPQTSFPVP 104
>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus
[TaxId: 1396]}
Length = 417
Score = 38.7 bits (90), Expect = 0.003
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 208 WQDRLRKLRAAGLNAVSTYVEWSFHEP-SPGQFQFTGDQDLEYFLELAVREDLLVLLRPG 266
+++ LR + G A++ W E QF F+ Q + + ++
Sbjct: 31 FENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRF---AQSVKNAGMKMIPIIS 87
Query: 267 PYICAERDFGG----LPSWLMTIKPNITLRSKDE---VYQHYVNKWF 306
+ C +PSW+ K + +L K E V + +N
Sbjct: 88 THQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLA 134
>d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 408
Score = 36.8 bits (84), Expect = 0.010
Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 15/146 (10%)
Query: 204 PRYYWQDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTGDQD--LEYFLELAVREDLLV 261
+Y + + + G N V + + + +G Q+ L+ + A L V
Sbjct: 71 STFYQEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKV 130
Query: 262 LLRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNG 321
+ D G N LR + + + I +
Sbjct: 131 WV----------DLHGAAGSQNG-FDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEE 179
Query: 322 --GPIILVQVENEMGSYTCDKEHMIW 345
+I +++ NE D + M
Sbjct: 180 YLDIVIGIELINEPLGPVLDMDKMKN 205
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus
aculeatus) [TaxId: 5053]}
Length = 334
Score = 35.1 bits (80), Expect = 0.033
Identities = 31/216 (14%), Positives = 60/216 (27%), Gaps = 28/216 (12%)
Query: 209 QDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPY 268
Q L AG+N++ V + PS G + + + + L
Sbjct: 30 QALETILADAGINSIRQRV---WVNPSDGSYDLD---YNLELAKRVKAAGMSLYL----- 78
Query: 269 ICAERDFGGLPSWLMTIKPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQ 328
D +W + + N I ++
Sbjct: 79 -----DLHLSDTWADPSDQTTPSGWSTTDLGTLKWQL-YNYTLEVCNTFAENDIDIEIIS 132
Query: 329 VENEMGSYTCDKEHMIWLRDQMKYYVRDAAVLYTTDGGGVGYLKCTVPGVYATVDFGAAT 388
+ NE+ + ++W + Y A+L++ G T P + +D G +
Sbjct: 133 IGNEIRAG------LLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSW 186
Query: 389 NVSSAF-----AAMRTVSPHGPLVNSEYYPGWLTHW 419
+ + F A +S YYP +
Sbjct: 187 DQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASA 222
>d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum
[TaxId: 1515]}
Length = 340
Score = 34.6 bits (78), Expect = 0.044
Identities = 9/82 (10%), Positives = 25/82 (30%), Gaps = 2/82 (2%)
Query: 204 PRYYWQDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTGD--QDLEYFLELAVREDLLV 261
+ + + + AG + V ++ E ++ D ++ LE + +L +
Sbjct: 26 DTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGL 85
Query: 262 LLRPGPYICAERDFGGLPSWLM 283
+L +
Sbjct: 86 VLDMHHAPGYRFQDFKTSTLFE 107
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis
[TaxId: 1402]}
Length = 387
Score = 34.4 bits (78), Expect = 0.054
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 21/131 (16%)
Query: 209 QDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTGDQDLEYFLELAVRED------LLVL 262
QD + L+ AG+N V + W+ + G G+ DLE +++ R L
Sbjct: 41 QDIFKTLKEAGVNYVRVRI-WNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADF 99
Query: 263 LRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGG 322
+ A+ P + K +YQ+ A G
Sbjct: 100 HYSDFW--ADPAKQKAPKAWANLNFEDK---KTALYQYTKQSLKAM---------KAAGI 145
Query: 323 PIILVQVENEM 333
I +VQV NE
Sbjct: 146 DIGMVQVGNET 156
>d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella
nidulans (Aspergillus nidulans) [TaxId: 162425]}
Length = 301
Score = 33.6 bits (76), Expect = 0.097
Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 25/161 (15%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPN 288
W EPS G F ++G +Y ++ A + + V + PSW+ +I
Sbjct: 48 WDALEPSQGNFGWSG---ADYLVDYATQHNKKVRGHTLVWHSQL------PSWVSSIGDA 98
Query: 289 ITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRD 348
TLR V +++N+ + +I + N ++ NE G++ + + D
Sbjct: 99 NTLR---SVMTNHINEVVGRYKGKIMHWDVVN-------EIFNEDGTFRNSVFYNLLGED 148
Query: 349 QMKYYVRDA------AVLYTTDGGGVGYLKCTVPGVYATVD 383
++ A A LY D + + V
Sbjct: 149 FVRIAFETARAADPDAKLYINDYNLDSASYAKTQAMASYVK 189
>d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas
haloplanktis [TaxId: 228]}
Length = 293
Score = 33.3 bits (75), Expect = 0.11
Identities = 17/192 (8%), Positives = 47/192 (24%), Gaps = 11/192 (5%)
Query: 184 FVKDGKPFRYVSGSFHYF----RSPRYYWQDRLRKLRA-AGLNAVSTYVEWSFHEP-SPG 237
+ G+ + S + + ++Y + + K + + + S
Sbjct: 12 ILAGGENTSFAGPSLFWSNTGWGAEKFYTAETVAKAKTEFNATLIRAAIGHGTSTGGSLN 71
Query: 238 QFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIK-----PNITLR 292
L+ + A+ ED+ V++ + + + N+
Sbjct: 72 FDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEAHTDQATAVRFFEDVATKYGQYDNVIYE 131
Query: 293 SKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRDQMKY 352
+E Q + + ++V R + Y
Sbjct: 132 IYNEPLQISWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAY 191
Query: 353 YVRDAAVLYTTD 364
+ A +
Sbjct: 192 TLHFYAGTHGQS 203
>d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 500
Score = 32.5 bits (74), Expect = 0.25
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 212 LRKLRAAGLNAVSTYVEWSFHEP-SPGQFQFTGDQDL 247
LRKL AG++ V V W E P + ++ + L
Sbjct: 33 LRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQL 69
>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein
EAJ56179 {Unidentified organism [TaxId: 32644]}
Length = 102
Score = 30.0 bits (67), Expect = 0.38
Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 559 TILYRNKMLSTPIMARPGQKLSILVENMGRI-NYGSYLHDPKGWKVYDCGPKHI 611
T L+RN L P Q IL+E+ G I V D K I
Sbjct: 2 TFLFRNGALLDPDHPDLLQGFEILIED-GFIREVSDKPIKSSNAHVIDVKGKTI 54
>d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max)
[TaxId: 3847]}
Length = 490
Score = 31.7 bits (72), Expect = 0.48
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 212 LRKLRAAGLNAVSTYVEWSFHEP-SPGQFQFTGDQDL 247
L +LRAAG++ V V W E P Q+ + + L
Sbjct: 34 LLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSL 70
>d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas)
[TaxId: 4120]}
Length = 498
Score = 31.3 bits (71), Expect = 0.61
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 212 LRKLRAAGLNAVSTYVEWSFHEP-SPGQFQFTGDQDL 247
L++++A G + V V W E P Q+ ++ ++L
Sbjct: 40 LKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYREL 76
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus
[TaxId: 155077]}
Length = 364
Score = 31.0 bits (69), Expect = 0.73
Identities = 16/135 (11%), Positives = 33/135 (24%), Gaps = 24/135 (17%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPN 288
S+ +P+ G F FT + F++ A ++ V +
Sbjct: 58 MSYMQPTEGNFNFTN---ADAFVDWATENNMTVHGHALVW------HSDYQVPNFMKNWA 108
Query: 289 ITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEM------GSYTCDKEH 342
+ ++ Y G ++ V NE ++
Sbjct: 109 GSAEDFLAALDTHITTIVDH---------YEAKGNLVSWDVVNEAIDDNSPANFRTTDSA 159
Query: 343 MIWLRDQMKYYVRDA 357
Y+ A
Sbjct: 160 FYVKSGNSSVYIERA 174
>d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus
aurantiacus [TaxId: 5087]}
Length = 303
Score = 30.8 bits (69), Expect = 0.73
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 23/129 (17%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPN 288
W EPS G F F G +Y + A + L+ G W +
Sbjct: 51 WDATEPSQGNFNFAG---ADYLVNWAQQNGKLIR-------------GHTLVWHSQLPSW 94
Query: 289 ITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRD 348
++ + + + L R G I V NE + ++L
Sbjct: 95 VSSITDKNTLTNVMKNHITTLMTRY-------KGKIRAWDVVNEAFNEDGSLRQTVFLNV 147
Query: 349 QMKYYVRDA 357
+ Y+ A
Sbjct: 148 IGEDYIPIA 156
>d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL
{Lactococcus lactis [TaxId: 1358]}
Length = 468
Score = 30.6 bits (68), Expect = 0.96
Identities = 20/176 (11%), Positives = 47/176 (26%), Gaps = 25/176 (14%)
Query: 182 DTFVKDGKPFRYVSGSFHYFRSPRYYWQDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQF 241
D +++D + S Y + + L G+N + + WS P+
Sbjct: 35 DKYLEDNYWYTAEPASDFYHK-----YPVDLELAEEYGVNGIRISIAWSRIFPTG----- 84
Query: 242 TGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHY 301
G+ + + P++ + +
Sbjct: 85 YGEVNEKGVEFYHKLFAECHKRHVEPFVTL---HHFDTPEAL------------HSNGDF 129
Query: 302 VNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRDQMKYYVRDA 357
+N+ + F F + + NE+G + + +KY +
Sbjct: 130 LNRENIEHFIDYAAFCFEEFPEVNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKV 185
>d2czca1 d.81.1.1 (A:140-301) Glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii
[TaxId: 53953]}
Length = 162
Score = 29.4 bits (66), Expect = 1.1
Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 15/109 (13%)
Query: 108 VSPHGPLVNSEYYPGWLTHWGEKIATVDTDPVVKTLQIMLEMKANVNF------YIPFSP 161
+ GP+ + +H G + TV + +
Sbjct: 34 DTKRGPINAIKPTVEVPSHHGPDVQTVIPINIETMA-----FVVPTTLMHVHSVMVELK- 87
Query: 162 FFFKADLASVQRKFEIDYERDTFVKDGKPFRYVSGSFHYFRSPRYYWQD 210
V FE + R + K F + + R W +
Sbjct: 88 --KPLTKDDVIDIFE-NTTRVLLFEKEKGFDSTAQIIEFARDLHREWNN 133
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 30.2 bits (67), Expect = 1.1
Identities = 18/66 (27%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 1 MIPGIGDPGTGMTLPWTNLQKTRPTTYAPGEIFPFQVENEMGSYTCDKEHMIW-LRDQMK 59
I IG G+G TL L K P I E G D E+++ L
Sbjct: 70 NILLIGPTGSGKTLMAQTLAK---HLDIPIAISDATSLTEAGYVGEDVENILTRLLQASD 126
Query: 60 YYVRDA 65
+ V+ A
Sbjct: 127 WNVQKA 132
>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT
{Escherichia coli [TaxId: 562]}
Length = 397
Score = 30.3 bits (67), Expect = 1.2
Identities = 18/179 (10%), Positives = 43/179 (24%), Gaps = 19/179 (10%)
Query: 137 DPVVKTLQIMLEMKANVNFYIPF--SPFFFKA--DLASVQRKFEIDYERDTFVKDGKPFR 192
V + + + Y+P + A L + +R ++
Sbjct: 47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSG 106
Query: 193 YVSGSFHYFRS---------PRYYWQDRLRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTG 243
+ + + W++ + AG +
Sbjct: 107 ALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYD------EATNGVRF 160
Query: 244 DQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHYV 302
+ L L R +L+ A+ + + +K + D YQ +
Sbjct: 161 NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFG 219
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens
[TaxId: 294]}
Length = 273
Score = 29.5 bits (64), Expect = 1.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P+VF AD + M+ L+ +GYR +++
Sbjct: 21 PIVFSHGWPLNADSWESQMIFLAAQGYRVIAH 52
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 29.5 bits (64), Expect = 1.9
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P+VF+ D + + + GYR +++
Sbjct: 21 PVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAH 52
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 29.2 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 603 VYDCGPKHIRSPLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
D GP+ P+VF +AD + + ML GYR +++
Sbjct: 13 YKDWGPRD-GLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAH 54
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 271
Score = 29.1 bits (63), Expect = 2.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P++F AD++ + M LS +GYRT+++
Sbjct: 21 PVLFSHGWLLDADMWEYQMEYLSSRGYRTIAF 52
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 29.1 bits (63), Expect = 2.2
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P+V + + + L GYR ++Y
Sbjct: 25 PVVLIHGFPLSGHSWERQSAALLDAGYRVITY 56
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId:
2336]}
Length = 324
Score = 29.4 bits (65), Expect = 2.3
Identities = 21/129 (16%), Positives = 36/129 (27%), Gaps = 22/129 (17%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPN 288
W P ++ FT E +E A D++V + + W N
Sbjct: 50 WDTIHPERDRYNFT---PAEKHVEFAEENDMIVHGHTLVWHNQLPGWITGREWTKEELLN 106
Query: 289 ITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRD 348
+ V H+ G + + V NE S + +W +
Sbjct: 107 VLEDHIKTVVSHF-------------------KGRVKIWDVVNEAVSDSGTYRESVWYKT 147
Query: 349 QMKYYVRDA 357
Y+ A
Sbjct: 148 IGPEYIEKA 156
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 29.1 bits (63), Expect = 2.3
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 600 GWKVY--DCGPKHIRSPLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
G +Y C ++ L+ + G + + + D++++G L Y
Sbjct: 11 GIYIYYKLCKAPEEKAKLMTMHGGPGMSHDYLLSLRDMTKEGITVLFY 58
>d2b8ua1 a.26.1.2 (A:1-129) Interleukin-4 (IL-4) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 129
Score = 28.0 bits (62), Expect = 2.6
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 17/106 (16%)
Query: 757 ILNKYETERLEAMEMWM-------KNITEAYTRKTENILLQEHHFHHECNI--LFYNEPN 807
LN ++ E+ + KN TE T +L++ + HHE + L
Sbjct: 13 TLNSLTEQKTLCTELTVTDIFAASKNTTEKETFCRAATVLRQFYSHHEKDTRCLGATAQQ 72
Query: 808 NGILSEVLLDSKPLSPWSMTQYPLSNLSWIDTAP--ATNTTKLPVF 851
+++ K L L L+ +++ P N + L F
Sbjct: 73 FHRHKQLIRFLKRLD------RNLWGLAGLNSCPVKEANQSTLENF 112
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 27.6 bits (60), Expect = 2.8
Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 16/91 (17%)
Query: 719 FMIRKYKLLTNKHLNIETHKKFI-------------KTFVWSVLLYGCETWILNKYETER 765
++ + + K + + K I V + ++
Sbjct: 26 VVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAF 85
Query: 766 LEAMEMWMKNITEAYTRKTENILLQEHHFHH 796
LE + W+++I +A + HH HH
Sbjct: 86 LEERDAWVRDINKAIKCIEGL---EHHHHHH 113
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp. [TaxId:
51671]}
Length = 279
Score = 28.7 bits (62), Expect = 3.0
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P+V + + +L +GYR ++Y
Sbjct: 25 PVVLIHGYPLDGHSWERQTRELLAQGYRVITY 56
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ
[TaxId: 1515]}
Length = 320
Score = 28.7 bits (63), Expect = 3.5
Identities = 19/130 (14%), Positives = 34/130 (26%), Gaps = 23/130 (17%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPN 288
+ +P F F+ + L A R + + + + +W
Sbjct: 49 FDALQPRQNVFDFS---KGDQLLAFAERNGMQMRGHTLIWHNQNPSWLTNGNWNRDSLLA 105
Query: 289 ITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHM-IWLR 347
+ V HY G I+ V NE + + IW
Sbjct: 106 VMKNHITTVMTHY-------------------KGKIVEWDVANECMDDSGNGLRSSIWRN 146
Query: 348 DQMKYYVRDA 357
+ Y+ A
Sbjct: 147 VIGQDYLDYA 156
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Length = 179
Score = 27.9 bits (61), Expect = 3.6
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
P+V + + G + F + L +G+
Sbjct: 4 PVVMVHGIGGASFNFAGIKSYLVSQGWSRDKL 35
>d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6
[TaxId: 1422]}
Length = 371
Score = 28.7 bits (63), Expect = 3.6
Identities = 16/133 (12%), Positives = 36/133 (27%), Gaps = 15/133 (11%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSW----LMT 284
+P G+F F + ++ A + + + + L +
Sbjct: 55 PISIQPEEGKFNFEQ---ADRIVKFAKANGMDIRFHTLVWHSQVPQWFFLDKEGKPMVNE 111
Query: 285 IKPNITLRSKDEVYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMI 344
P ++K + + I + I V NE+ +
Sbjct: 112 TDPVKREQNKQLLLKRLET--------HIKTIVERYKDDIKYWDVVNEVVGDDGKLRNSP 163
Query: 345 WLRDQMKYYVRDA 357
W + Y++ A
Sbjct: 164 WYQIAGIDYIKVA 176
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6
[TaxId: 1422]}
Length = 330
Score = 28.6 bits (63), Expect = 4.0
Identities = 7/53 (13%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Query: 229 WSFHEPSPGQFQFTGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSW 281
+ +P G+F F + ++ A + V + D+
Sbjct: 48 FEHLQPEEGKFTFQE---ADRIVDFACSHRMAVRGHTLVWHNQTPDWVFQDGQ 97
>d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi
[TaxId: 556]}
Length = 291
Score = 28.2 bits (62), Expect = 4.1
Identities = 30/269 (11%), Positives = 71/269 (26%), Gaps = 50/269 (18%)
Query: 184 FVKDGKPFRYVSGSFHYF----RSPRYYWQDRLRKLRAA-GLNAVSTYVEWSFHEPSPGQ 238
K + S + ++Y D + L+ + V + + S G
Sbjct: 12 IYAGEKAKSFAGNSLFWSNNGWGGEKFYTADTVASLKKDWKSSIVRAAMGV---QESGGY 68
Query: 239 FQF--TGDQDLEYFLELAVREDLLVLLRPGPYICAERDFGGLPSWLMTIKPNITLRSKDE 296
Q +E ++ A+ D+ ++ + + + E
Sbjct: 69 LQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSAENNRSEAIRFF-------------QE 115
Query: 297 VYQHYVNKWFAQLFPRITRFLYGNGGPIILVQVENEMGSYTCDKEHMIWLRDQMKYYVRD 356
+ + Y NK + N ++ K + + ++ D
Sbjct: 116 MARKYGNKP-------NVIYEIYNE--------PLQVSWSNTIKPYAEAVISAIRAIDPD 160
Query: 357 AAVL-----YTTDGGGVGYLKCTVPGVYATVDFGAATNVSSAFAAMRTVSPHGPLVNSEY 411
++ ++ + + T+ F A T+ S R +G
Sbjct: 161 NLIIVGTPSWSQNVDEASRDPINAKNIAYTLHFYAGTHGESLRNKARQALNNG------- 213
Query: 412 YPGWLTHWGEKIATVDTDPVVKTLQIMLE 440
++T WG A + +
Sbjct: 214 IALFVTEWGTVNADGNGGVNQTETDAWVT 242
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 286
Score = 28.2 bits (61), Expect = 4.6
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 612 RSPLVFLPPVSGTADIFFHLMLDLSRKGY 640
PL + P+ G+ +F L LS Y
Sbjct: 25 ERPLFLVHPIEGSTTVFHSLASRLSIPTY 53
>d1an8a2 d.15.6.1 (A:96-208) Streptococcal superantigen Spe-C
{Streptococcus pyogenes [TaxId: 1314]}
Length = 113
Score = 26.6 bits (59), Expect = 7.1
Identities = 6/42 (14%), Positives = 10/42 (23%)
Query: 869 YVDMSNWAKGVVFINEHNLGKYWTTLGPQLTLYLPAPFIKPY 910
Y S + G + I + L + Y
Sbjct: 52 YDATSPYVSGRIEIGTKDGKHEQIDLFDSPNEGTRSDIFAKY 93
>d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus
[TaxId: 5087]}
Length = 305
Score = 27.4 bits (60), Expect = 7.6
Identities = 14/100 (14%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Query: 206 YYWQDR--LRKLRAAGLNAVSTYVEWSFHEPSPGQFQFTGD--QDLEYFLELAVREDLLV 261
Y W D + L + G+N P+ + DL + ++
Sbjct: 29 YIWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYA 88
Query: 262 LLRPGPYICAERDFGGLPSWLMTIKPNITLRSKDEVYQHY 301
++ P Y PS T + + +
Sbjct: 89 VVDPHNYGRYYNSIISSPSDFETFWKTVASQFASNPLVIF 128
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae
[TaxId: 666]}
Length = 264
Score = 27.2 bits (58), Expect = 8.5
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
+V + + G+ + ++ L+R L+
Sbjct: 18 LVVLVHGLLGSGADWQPVLSHLARTQCAALTL 49
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25
{Archaeoglobus fulgidus [TaxId: 2234]}
Length = 206
Score = 26.8 bits (58), Expect = 9.6
Identities = 12/47 (25%), Positives = 13/47 (27%), Gaps = 11/47 (23%)
Query: 175 FEIDYERDTFVKDGKPFRYVSGSFHYFRSPRYYWQDRLRKLRAAGLN 221
EI YER T V G P + R RA
Sbjct: 2 AEIYYERGTIVVKGDAH-----------VPHAKFDSRSGTYRALAFR 37
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2)
{Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 258
Score = 27.2 bits (58), Expect = 9.8
Identities = 4/32 (12%), Positives = 10/32 (31%)
Query: 614 PLVFLPPVSGTADIFFHLMLDLSRKGYRTLSY 645
V + ++ L L G++ +
Sbjct: 4 HFVLVHGACHGGWSWYKLKPLLEAAGHKVTAL 35
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.138 0.435
Gapped
Lambda K H
0.267 0.0540 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,740,804
Number of extensions: 182965
Number of successful extensions: 494
Number of sequences better than 10.0: 1
Number of HSP's gapped: 484
Number of HSP's successfully gapped: 70
Length of query: 949
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 855
Effective length of database: 1,116,976
Effective search space: 955014480
Effective search space used: 955014480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.2 bits)