BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12911
(356 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5FVA9|RAE1L_XENTR mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1
Length = 368
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 239/346 (69%), Positives = 283/346 (81%), Gaps = 2/346 (0%)
Query: 11 TTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPK 70
T T NP KD EV SPP+DSISC++FSP TLP FLIAGSW N+VRCWEV+ NG+TIPK
Sbjct: 21 TATDNHNPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPK 80
Query: 71 SMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPN 130
+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQS+Q+AQHDAP+KT HW+KAPN
Sbjct: 81 AQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPN 140
Query: 131 YTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGK 190
Y+C+MTGSWDK+LKFWD R+P P++T+ LPERCYCADV YP+AVV TA RG+++YQLE +
Sbjct: 141 YSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQ 200
Query: 191 PQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCH 249
P EF++ +SPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCH
Sbjct: 201 PSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCH 260
Query: 250 RSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
RSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS
Sbjct: 261 RSNGTNTTAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 320
Query: 309 CALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
C+ NHNG IFAY+ SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 321 CSFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q5E9A4|RAE1L_BOVIN mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1
Length = 368
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG +TTT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------STTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D IS C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|A5GFN6|RAEL1_PIG mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1
Length = 368
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 243/356 (68%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG +TTT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------STTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D IS C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q5RF99|RAEL1_PONAB mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1
Length = 368
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG + TT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL+SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D IS C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|P78406|RAE1L_HUMAN mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1
Length = 368
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG + TT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL+SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D IS C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1
Length = 368
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG +TTT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------STTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D I+ C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q4R6D2|RAE1L_MACFA mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1
Length = 368
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/356 (67%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG + TT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------SATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL+SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPER YCADV YP+AVV TAGR
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGR 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D IS C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q3SWS8|RAE1L_RAT mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=2 SV=1
Length = 368
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/356 (67%), Positives = 283/356 (79%), Gaps = 8/356 (2%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
MFG +TTT NP KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWE
Sbjct: 17 MFG------STTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWE 70
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ +G+TIPK+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPV
Sbjct: 71 VQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPV 130
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR 180
KT HWIKAPNY+C+MTGSWDKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA R
Sbjct: 131 KTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAER 190
Query: 181 GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
G+++YQLE +P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP
Sbjct: 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP 250
Query: 241 -KDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
KDNFTFKCHRSNG QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK
Sbjct: 251 AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT 310
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
SE +D ++ C NHNG IFAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 311 SEQLDQPVAACGFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q7ZWF0|RAE1L_DANRE mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2
Length = 368
Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust.
Identities = 235/347 (67%), Positives = 283/347 (81%), Gaps = 2/347 (0%)
Query: 10 TTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIP 69
+TTT + NP KD EV SPP+DSISC+AFSP T+P FLI GSW N+VRCWEV+ NG+T+P
Sbjct: 20 STTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVP 79
Query: 70 KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAP 129
K+ Q + PVLDV W DDG+KVF A CDKT K WDL SNQ++Q+AQH+ P++T HWIKAP
Sbjct: 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAP 139
Query: 130 NYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEG 189
NY+C+MTGSWDKTLKFWD R+P P+M++ +PERCYCADV YP+AVV TA RG+++YQLE
Sbjct: 140 NYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLEN 199
Query: 190 KPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKC 248
+P EF++ ESPLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKC
Sbjct: 200 QPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259
Query: 249 HRSNGGAGGV-QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIS 307
HRSNG QDIYAVN I FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D I+
Sbjct: 260 HRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIT 319
Query: 308 TCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
C NHNG IFAYA SYDWSKGHE+ NP K N IFLR E++KPR+
Sbjct: 320 ACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRN 366
>sp|Q93454|NPP17_CAEEL Nucleoporin-17 OS=Caenorhabditis elegans GN=npp-17 PE=1 SV=1
Length = 373
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/359 (53%), Positives = 235/359 (65%), Gaps = 7/359 (1%)
Query: 1 MFGQPALSTTTTTSTPNP--NKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
MFG +ST+TTT N N DF V PED+I + FSP+ + L GSWD +R
Sbjct: 12 MFGGSNISTSTTTPAANTTQNDDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRV 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDA 118
W K+ Q + P+LD+AWI+D +K+F+A DK + WDLASNQ V HD
Sbjct: 72 WMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLASNQVAVVGTHDG 131
Query: 119 PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT---PQPIMTINLPERCYCADVDYPLAVV 175
PVKTCHWI NY CLMTGS+DKTL+FWD++ + I LPER Y ADV YP+AVV
Sbjct: 132 PVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVV 191
Query: 176 GTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQ-PAGYGLGSVEGRVAIQY 234
A + I +Y LE P E K ES LK+Q RCI+IF+DK Q PAG+ LGS+EGRVA+QY
Sbjct: 192 ALANKHIKVYNLENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQY 251
Query: 235 VNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDART 294
V+ ANPKDNFTFKCHRS G Q+IYAVN I FHP HGTL T+GS+G +S WDKDART
Sbjct: 252 VDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDART 311
Query: 295 KLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPR 353
KLK SE M ++ C ++ +G YA+ YDWS+GHE N G+ I + C EDMKPR
Sbjct: 312 KLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHE-GNTQPGSKIVIHKCIEDMKPR 369
>sp|Q38942|RAE1L_ARATH Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670
PE=2 SV=2
Length = 349
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/363 (46%), Positives = 220/363 (60%), Gaps = 29/363 (7%)
Query: 2 FGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEV 61
FG PA T+ NPNK +EV P DSIS ++FSP L+A SWDN VRCWE+
Sbjct: 4 FGAPA------TANSNPNKSYEVTPSPADSISSLSFSPRA---DILVATSWDNQVRCWEI 54
Query: 62 EPNGKTI---PKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASN-QSMQVAQHD 117
+G ++ PK+ +PVL AW DDGT VF GCDK K W L S Q + VA H+
Sbjct: 55 SRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHE 114
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGT 177
P+ WI P L TGSWDKTLK+WD R P+ T LP++CY V +PL VVGT
Sbjct: 115 GPIAAMAWI--PGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGT 172
Query: 178 AGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNP 237
A R ++++ L+ EFK+ +SPLKYQ RC+ F D++ G+ +GS+EGRV + +++
Sbjct: 173 ADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQ----GFLVGSIEGRVGVHHLDD 228
Query: 238 ANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK 297
+ NFTFKCHR DIY+VN + FHPVHGT AT GS+G F+FWDKD++ +LK
Sbjct: 229 SQQSKNFTFKCHRDG------NDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLK 282
Query: 298 PSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKG-NAIFLRPCFED---MKPR 353
+ I + NH+G I+AYA YDWSKG E++NP ++IFL E KPR
Sbjct: 283 AMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPR 342
Query: 354 SGS 356
G+
Sbjct: 343 VGA 345
>sp|P41838|RAE1_SCHPO Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rae1 PE=1 SV=1
Length = 352
Score = 314 bits (805), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 219/355 (61%), Gaps = 12/355 (3%)
Query: 1 MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
+FGQ A ++T + +T + KD EV PPEDSIS +AFSP +L A SWD+ VR +E
Sbjct: 3 LFGQ-ATTSTVSNATGDLKKDVEVAQPPEDSISDLAFSPQA---EYLAASSWDSKVRIYE 58
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ G++I K++ PVL V W DGTKV DK+ K +D+ + Q+ QVA HD V
Sbjct: 59 VQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAV 118
Query: 121 KTCHWIKAPNYT-CLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAG 179
+ +++A + L TGSWDKTLK+WDLR PI T++LPER Y D +PL V TA
Sbjct: 119 RCVRFVEAMGTSPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAE 178
Query: 180 RGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPAN 239
R I + L + FK SPLK+Q R +A F + GY +GSVEGR AIQ ++ N
Sbjct: 179 RNICVINLSEPTKIFKLAMSPLKFQTRSLACF----IKGDGYAIGSVEGRCAIQNIDEKN 234
Query: 240 PKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPS 299
NF+F+CHR+ AG D+Y+VN I FHP +GT +T GS+GTFSFWDKD+ +LK
Sbjct: 235 ASQNFSFRCHRNQ--AGNSADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSY 292
Query: 300 EAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFED-MKPR 353
+ +IS N G IFAYA+SYDWSKG+ NN N I L P +D +KPR
Sbjct: 293 PNVGGTISCSTFNRTGDIFAYAISYDWSKGYTFNNAQLPNKIMLHPVPQDEIKPR 347
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 291 bits (746), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 206/356 (57%), Gaps = 20/356 (5%)
Query: 1 MFGQPALSTTTTTSTPNPNK-----DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNN 55
F + ++ TST N+ D + SP EDSIS +AFSP + A SWD
Sbjct: 3 FFNRSNTTSALGTSTAMANEKDLANDIVINSPAEDSISDIAFSPQQ--DFMFSASSWDGK 60
Query: 56 VRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ 115
VR W+V+ NG ++ S PVL W +DGTKV GCD +K +D+AS Q+ Q+
Sbjct: 61 VRIWDVQ-NGVPQGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGM 119
Query: 116 HDAPVKTCHWIKA--PNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLA 173
H AP+K +++ N C++TGSWDKT+K+WD+R PQP+ T+ +PER Y D L
Sbjct: 120 HSAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMRQPQPVSTVMMPERVYSMDNKQSLL 179
Query: 174 VVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQ 233
VV TA R I + L FK T SPLK+Q RC+A + + GY +GSVEGR +I+
Sbjct: 180 VVATAERHIAIINLANPTTIFKATTSPLKWQTRCVACYNEAD----GYAIGSVEGRCSIR 235
Query: 234 YVNPA-NPKDNFTFKCHRSNG-----GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSF 287
Y++ K F+FKCHR G+ G +Y VN I FHP++GT T G +GTF+F
Sbjct: 236 YIDDGMQKKSGFSFKCHRQTNPNRAPGSNGQSLVYPVNSIAFHPLYGTFVTAGGDGTFNF 295
Query: 288 WDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFL 343
WDK+ R +LK + SI C+ N NG +FAYA+SYDW +GH N P+ N I L
Sbjct: 296 WDKNQRHRLKGYPTLQASIPVCSFNRNGSVFAYALSYDWHQGHMGNRPDYPNVIRL 351
>sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=2
Length = 326
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 183/337 (54%), Gaps = 20/337 (5%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + + +P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMD-DTEHPEDG--IFIRQVTDAETKPKS 325
>sp|Q1JQB2|BUB3_BOVIN Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1
Length = 326
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 183/337 (54%), Gaps = 20/337 (5%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + + +P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMD-DTEHPEDG--IFIRQVTDAETKPKS 325
>sp|O43684|BUB3_HUMAN Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1
Length = 328
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 183/337 (54%), Gaps = 20/337 (5%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + + +P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMD-DTEHPEDG--IFIRQVTDAETKPKS 325
>sp|Q5RB58|BUB3_PONAB Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1
Length = 328
Score = 201 bits (512), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 182/337 (54%), Gaps = 20/337 (5%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P + TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMATGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFLNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + + +P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMD-DTEHPEDG--IFIRQVTDAETKPKS 325
>sp|Q9YGY3|BUB3_XENLA Mitotic checkpoint protein BUB3 OS=Xenopus laevis GN=bub3 PE=1 SV=1
Length = 330
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/336 (35%), Positives = 184/336 (54%), Gaps = 20/336 (5%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PED IS + FSP+T FL+ SWD++VR ++V N + G PVL
Sbjct: 12 EFKLNQAPEDGISAVKFSPNT--SQFLLVSSWDSSVRLYDVPANTMRLKYQHAG---PVL 66
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++ V HDAP++ + P ++TGSWD
Sbjct: 67 DCAFYD-PTHAWSGGLDHQLKMHDLNTDGDTVVGSHDAPIRCVEY--CPEVNVIVTGSWD 123
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + P++ Y V +VGTAGR ++++ L ++ ES
Sbjct: 124 QTVKLWDPRTPCNAGTFSQPDKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 183
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 184 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSLEVQKKKYAFKCHRLK--ENNI 237
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN + FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 238 EQIYPVNAVSFHNLHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGSTL 297
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPR 353
A A SY + + ++P +AI++R + + KP+
Sbjct: 298 AIAASYMYEMD-DIDHPE--DAIYIRQVTDAETKPK 330
>sp|Q54DM1|BUB3_DICDI Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3
PE=3 SV=1
Length = 331
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 20/321 (6%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLD 81
+E+ PP D IS + F P+++ L+ SWD+ VRC++ + N + + +G PV+D
Sbjct: 10 YELRLPPSDGISSVNFCPNSVN---LLVTSWDSTVRCYDTQNNVQKWQYNHKG---PVMD 63
Query: 82 VAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDK 141
+ KVF +VK +D + +V H+ V++ + + L TG WD+
Sbjct: 64 -GCFPEKNKVFSGDVFGSVKHYDPVAGVEKEVGSHEDGVRSV--VYNSDTQQLFTGGWDQ 120
Query: 142 TLKFWDLRTPQ-PIMTINLPERCYCADVD--YPLAVVGTAGRGIVLYQLEGKPQEFKKTE 198
LK WD+R+ + I +L + + DV + V+GTA + + +Y +K E
Sbjct: 121 QLKLWDIRSDKMEISNHDLQSKIFTMDVSPISNMLVIGTADKYVTIYDTRQMETHLQKRE 180
Query: 199 SPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNP--ANPKDNFTFKCHRSNGGAG 256
S +KYQ RCI F D K GY L SVEGR+A++Y +P A + FKCHR
Sbjct: 181 SSIKYQTRCIRTFTDGK----GYALASVEGRIAMEYFDPSPAVQSKKYAFKCHRLT--ES 234
Query: 257 GVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQ 316
GV +Y VN I F+P +GT AT G + FWD R +L + SIS+ + N +G
Sbjct: 235 GVDVVYPVNCIAFNPHYGTFATGGCDKNVFFWDGANRKRLHALKTYPTSISSMSFNTDGN 294
Query: 317 IFAYAVSYDWSKGHEHNNPNK 337
I A A SY + +G + + P++
Sbjct: 295 ILAVASSYTFEEGEKDHPPDQ 315
>sp|O42860|BUB3_SCHPO Mitotic checkpoint protein bub3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bub3 PE=1 SV=1
Length = 320
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 153/300 (51%), Gaps = 15/300 (5%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++ +D IS + FSPS + LIAG WD ++ +++ N + + K +S P+L +
Sbjct: 7 LLKNSKDGISSVIFSPSVKNE--LIAGCWDGSLLHYQISENPELLGK--YDLSSPILSLE 62
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTL 143
+ D+ T + D TV DL + + H V ++ N C ++GSWDK+
Sbjct: 63 YTDEKT-ALVGNLDGTVTTLDLNTRNHEFLGNHGKGVSCISKLRLEN--CFISGSWDKSF 119
Query: 144 KFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
+ WD+R QP+ ++ ++ + + + V+G + R ++Y + F++ S KY
Sbjct: 120 RVWDVRVKQPVEGQDIGKKIFASSSRDNILVLGCSERENLVYDIRNLKLPFQRRPSSFKY 179
Query: 204 QNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGVQDI 261
R + + G+ S+EGR +++Y+NP+ NFTFKCHR + +
Sbjct: 180 MTRSVCC----NQNFEGFVSSSIEGRTSVEYINPSQEAQSKNFTFKCHRQIQKDYDI--V 233
Query: 262 YAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
Y VN + FHP+H TLAT G +G +FWD R +L+ ++IS+ + N +G + A A
Sbjct: 234 YPVNDLKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNPSKINISSISFNVDGSMLAIA 293
>sp|P26449|BUB3_YEAST Cell cycle arrest protein BUB3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BUB3 PE=1 SV=1
Length = 341
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 28/293 (9%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGM--SEPVL 80
++ P+D IS + PS + L+ SWD ++ ++ + K + +Q + P+L
Sbjct: 5 QIEQAPKDYISDIKIIPS---KSLLLITSWDGSLTVYKFDIQAKNVDL-LQSLRYKHPLL 60
Query: 81 DVAWIDD-GTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGS 138
+ID+ ++++ + DL + S Q + ++A + C K + L+ S
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK-LIAAS 119
Query: 139 WDKTLKFWDLRT--PQPIMTINL-------PERCYCADVDYPLAVVGTAGRGIVLYQL-E 188
WD ++ D R I NL + + D + +VG + ++L
Sbjct: 120 WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL 179
Query: 189 GKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPA----NPKDNF 244
+ ES LKYQ R +A+ K+ GY S++GRVA+++ + N F
Sbjct: 180 CEDDNGTIEESGLKYQIRDVALL---PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236
Query: 245 TFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK 297
F+CHR N + Y VN I F P H L T GS+G S W+ R K+K
Sbjct: 237 AFRCHRLNLKDTNLA--YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK 287
>sp|Q42384|PRL1_ARATH Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana
GN=PRL1 PE=1 SV=1
Length = 486
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 120/311 (38%), Gaps = 34/311 (10%)
Query: 18 PNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSE 77
P K++ V+ + +AF PS + GS D ++ W+V + ++ G E
Sbjct: 165 PWKNYRVIQGHLGWVRSVAFDPS---NEWFCTGSADRTIKIWDVATG--VLKLTLTGHIE 219
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
V +A + T +F AG DK VKCWDL N+ ++ C + P L+TG
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH-PTLDVLLTG 278
Query: 138 SWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPL---AVVGTAGRGIVLYQLEGKPQEF 194
D + WD+RT I ++ + C+ P V G+ I + L +
Sbjct: 279 GRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDL-----RY 333
Query: 195 KKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGG 254
KT S L + + + R P S ++ + PK F CH
Sbjct: 334 GKTMSTLTHHKKSV---RAMTLHPKENAFASASADNTKKF---SLPKGEF---CHNMLSQ 384
Query: 255 AGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHN 314
+ + AVN G + T G G+ FWD + + SE + + +L
Sbjct: 385 QKTIINAMAVNE------DGVMVTGGDNGSIWFWDWKSGHSFQQSETI---VQPGSLESE 435
Query: 315 GQIFAYAVSYD 325
I YA YD
Sbjct: 436 AGI--YAACYD 444
>sp|O43071|PRP17_SCHPO Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp17 PE=1 SV=1
Length = 558
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
ISC+ F P + + L++GS DN ++ WEV + +++ ++ QG + P+ D+++ DG
Sbjct: 269 ISCLRFFP--ISGHLLLSGSMDNQIKIWEVY-HDRSLLRTFQGHARPIRDLSFSQDGRSF 325
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNY-TCLMTGSWDKTLKFWDLRT 150
DKT+K WD + + D + P+ + G+ DK + +D+R+
Sbjct: 326 LSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRS 385
Query: 151 PQPI 154
P +
Sbjct: 386 PDIV 389
>sp|Q12417|PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1
Length = 451
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+A P + + I GS D ++ W++ GK + ++ G V DVA D +
Sbjct: 142 VRCVAIDP--VDNEWFITGSNDTTMKVWDL-ATGK-LKTTLAGHVMTVRDVAVSDRHPYL 197
Query: 92 FMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
F DKTVKCWDL NQ ++ H + V+T P + T D +K WD+RT
Sbjct: 198 FSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVS--IHPTLDLIATAGRDSVIKLWDMRT 255
Query: 151 PQPIMTI 157
P++T+
Sbjct: 256 RIPVITL 262
>sp|O61585|KTNB1_STRPU Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus
purpuratus GN=KATNB1 PE=1 SV=1
Length = 690
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 18 PNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSE 77
P K ++ +SI CM F P F+ +GS D NV+ W+V G + +G S+
Sbjct: 90 PAKIVRTLTGHRNSIRCMDFHPFG---EFVASGSTDTNVKLWDVRRKGCIY--TYKGHSD 144
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMT 136
V + + DG + A D T+K WDL + Q H V + PN L +
Sbjct: 145 QVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEF--HPNEFLLAS 202
Query: 137 GSWDKTLKFWDLRTPQPI 154
GS D+T++FWDL T Q +
Sbjct: 203 GSSDRTVQFWDLETFQLV 220
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+++C+A P + ++ G D V W V I S+ G + PV V +
Sbjct: 18 NVNCLALGP--MSGRVMVTGGEDKKVNLWAVGKQNCII--SLSGHTSPVDSVKFNSSEEL 73
Query: 91 VFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
V T+K +DL + ++ + H ++ + P + +GS D +K WD+R
Sbjct: 74 VVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDF--HPFGEFVASGSTDTNVKLWDVR 131
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 13 TSTPNPNKDFE---VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIP 69
+STPNP F +S +++ + FSP L +GS D V W+ +
Sbjct: 21 SSTPNPTVAFRCTHALSGHTKAVAAVKFSPD---GSLLASGSADRTVALWDAATGARV-- 75
Query: 70 KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKA 128
++ G S V DVAW +G + A D ++K WD + ++ + H V C++ A
Sbjct: 76 NTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGA 135
Query: 129 PNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ L +GS+D+TL+ WD+R+ + + +
Sbjct: 136 AGH-LLASGSFDETLRLWDVRSGRCLREV 163
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
+ L +GS+D +R W+V +G+ + + + S+PV A+ DG+ V + D ++ WD
Sbjct: 138 HLLASGSFDETLRLWDVR-SGRCL-REVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWD 195
Query: 105 LASNQSMQVA--QHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ ++ + PV + PN ++ + D K WD
Sbjct: 196 TQTGHCLKTLFDRDSPPVSFAAFT--PNAKYVLCNTLDGRAKLWD 238
>sp|Q75AV4|PFS2_ASHGO Polyadenylation factor subunit 2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PSF2
PE=3 SV=1
Length = 449
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 118/289 (40%), Gaps = 28/289 (9%)
Query: 21 DFEVVSPPEDS-ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+FE + DS ++ M +S + +LI+G D ++ W+ PN + + +E +
Sbjct: 112 NFESIMQAHDSAVTVMQYSHAG---DWLISGDADGTIKIWQ--PNFNMVKVLDRAHTECM 166
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGS 138
D+++ K D +K W+ ++ Q +V + H VK+C W P +++GS
Sbjct: 167 RDISFSYSDQKFVTCSDDNVLKIWNFSNGQQERVLSGHHWDVKSCDW--HPKMGLIVSGS 224
Query: 139 WDKTLKFWDLRTPQPIMTINLPERCYCADVDYP----LAVVGTAGRGIVLYQLEGKPQEF 194
D +K WD RT + + TI + P L V + + I +Y + +E
Sbjct: 225 KDNLIKLWDPRTGRNVSTILGLKHTVIKTKFQPTQGNLLAVVSKDKSIKIYDMRQHMREL 284
Query: 195 KKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGG 254
+ + Y + + + +G G AI++ + + N T CH
Sbjct: 285 QTIRDDMDYMSLSWHPINE-----TIFSVGCYNG--AIKHFDLLHDNSNSTPACHTIPYA 337
Query: 255 AGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMD 303
+V + + PV LA+ + T FW AR++ A D
Sbjct: 338 HEK-----SVTSLAYSPVGHILASAAKDRTIRFW---ARSRPVDPNAFD 378
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W+V G +G ++ V + + DG + A D +VK WDL
Sbjct: 119 FVASGSLDTNIKLWDVRRKGCVF--RYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI 154
+ + M ++++H PV + PN L +GS D+T++FWDL Q I
Sbjct: 177 TAGKMMAELSEHKGPVNIIEF--HPNEYLLASGSADRTVRFWDLEKFQLI 224
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 25/232 (10%)
Query: 88 GTKVFMAGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
G V G D V W + N M + H PV++ + A ++ GS +L+ W
Sbjct: 33 GRLVATGGDDCRVNLWSVNKPNCIMSLTGHTTPVESVRFNNAEEL--IVAGSQSGSLRVW 90
Query: 147 DLRTPQPIMTINLPERCYCADVDYP---LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
DL + + T+ + C+ +P G+ I L+ + K F+ Y
Sbjct: 91 DLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFR-------Y 143
Query: 204 QNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYA 263
+ A+ R + P G L S +++ + K H+
Sbjct: 144 KGHTQAV-RCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKG-----------P 191
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
VN I FHP LA+ ++ T FWD + + +E + + + +G
Sbjct: 192 VNIIEFHPNEYLLASGSADRTVRFWDLEKFQLIGCTEGETIPVRAILFSSDG 243
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
E+ ++ +A SP+ F+ GS D +R W V T+ + ++G E V +A+ D
Sbjct: 443 ENGVTAIAISPN---DQFIAVGSLDQIIRVWSV---SGTLVERLEGHKESVYSIAFSPDS 496
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK------------APNYTCLMT 136
+ + DKT+K W+L + +S+ ++ P C +P+ ++
Sbjct: 497 SILLSGSLDKTIKVWELQATRSVGLSAIK-PEGICKATYTGHTDFVLSVAVSPDSRWGLS 555
Query: 137 GSWDKTLKFWDLRTPQPIMT 156
GS D++++FWDL+T Q +T
Sbjct: 556 GSKDRSMQFWDLQTGQSYLT 575
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 28/211 (13%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+++GS D R W+VE G+ I K + V +A + + + D+ ++ W +
Sbjct: 416 FIVSGSGDRTARLWDVE-TGQCILK--LEIENGVTAIAISPNDQFIAVGSLDQIIRVWSV 472
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI-MTINLPE--- 161
+ ++ H V + + +P+ + L++GS DKT+K W+L+ + + ++ PE
Sbjct: 473 SGTLVERLEGHKESVYSIAF--SPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC 530
Query: 162 -RCYCADVDYPLAVV----------GTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAI 210
Y D+ L+V G+ R + + L+ Q + + ++N I++
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTG-QSYLTCQG---HKNSVISV 586
Query: 211 -FRDKKKQPAGYGLGSVEGRVAIQYVNPANP 240
F +Q + GS + R I ++PA+P
Sbjct: 587 CFSPDGRQ---FASGSGDLRARIWSIDPASP 614
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/139 (19%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 10 TTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIP 69
T +P+P++D V +AFSP +L+ G+ D ++ W++ + + +
Sbjct: 349 TLHEESPDPSRDLYV--------RTIAFSPDG---KYLVTGTEDRQIKLWDL--STQKVR 395
Query: 70 KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAP 129
G + + + + +G + D+T + WD+ + Q + + + V +P
Sbjct: 396 YVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAI--SP 453
Query: 130 NYTCLMTGSWDKTLKFWDL 148
N + GS D+ ++ W +
Sbjct: 454 NDQFIAVGSLDQIIRVWSV 472
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTG 137
V +A+ DG + D+ +K WDL++ + V + H+ + + + + N +++G
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDF--SHNGRFIVSG 420
Query: 138 SWDKTLKFWDLRTPQPIMTINL 159
S D+T + WD+ T Q I+ + +
Sbjct: 421 SGDRTARLWDVETGQCILKLEI 442
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W+V G +G ++ V + + DG + A D +VK WDL
Sbjct: 119 FVASGSLDTNIKLWDVRRKGCVF--RYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ + M ++++H PV + PN L +GS D+T++FWDL
Sbjct: 177 TAGKMMAELSEHKGPVNIIEF--HPNEYLLASGSADRTVRFWDL 218
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 88/233 (37%), Gaps = 27/233 (11%)
Query: 88 GTKVFMAGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
G V G D V W + N M + H PV++ + + ++ GS +L+ W
Sbjct: 33 GRLVATGGDDCRVHLWSVNKPNCIMSLTGHTTPVESVRFNNSEEL--IVAGSQSGSLRIW 90
Query: 147 DLRTPQPIMTINLPERCYCADVDY----PLAVVGTAGRGIVLYQLEGKPQEFKKTESPLK 202
DL + + T+ + + + +D+ G+ I L+ + K F+
Sbjct: 91 DLEAAKILRTL-MGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFR------- 142
Query: 203 YQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIY 262
Y+ A+ R + P G L S +++ + K H+
Sbjct: 143 YKGHTQAV-RCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKG----------- 190
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
VN I FHP LA+ ++ T FWD + + +E + + +++G
Sbjct: 191 PVNIIEFHPNEYLLASGSADRTVRFWDLEKFQLVGCTEGETIPVRAILFSNDG 243
>sp|Q7ZW33|UTP15_DANRE U3 small nucleolar RNA-associated protein 15 homolog OS=Danio rerio
GN=utp15 PE=2 SV=1
Length = 517
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
L+AGS + +R +++ G+ + +G S+ V +++ DG +V D T + WD+
Sbjct: 94 LLVAGSEEGLIRLFDI--GGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDV 151
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCY 164
AS + + +H ++ K N +TGS+D T+K +D+R+ +MT+ +
Sbjct: 152 ASAVELSSITEHTDYIRAIAPSKL-NPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVE 210
Query: 165 CADVDYP--LAVVGTAGRGIVLYQLEGKPQEF 194
C + YP +V T GR + ++ L Q+
Sbjct: 211 CV-LLYPSEALLVSTGGRYVKVWDLLKGGQQL 241
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
E+ S E + A +PS L + GS+D+ V+ ++V +G ++ G +PV +
Sbjct: 156 ELSSITEHTDYIRAIAPSKLNPDVFVTGSYDHTVKMFDVR-SGNSVMTMQHG--QPV-EC 211
Query: 83 AWIDDGTKVFMAGCDKTVKCWDL--ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
+ + ++ + VK WDL Q + + H V TC + + N L+T S D
Sbjct: 212 VLLYPSEALLVSTGGRYVKVWDLLKGGQQLVSLKNHHKTV-TCACLSSSNK--LLTASLD 268
Query: 141 KTLKFWD 147
+ +K ++
Sbjct: 269 RHVKVYN 275
>sp|Q7RY68|PFS2_NEUCR Polyadenylation factor subunit 2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pfs-2 PE=3 SV=2
Length = 660
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Query: 21 DFEVVSPPEDS-ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+FE + DS I + +S S +L++ D ++ W+ PN + +S++G ++P+
Sbjct: 129 NFETIMQAHDSAIRALVYSHS---DDWLVSADHDGIIKYWQ--PNFNNV-ESIRGHTDPI 182
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQS-MQVAQHDAPVKTCHWIKAPNYTCLMTGS 138
D+A+ + TK A D+T+K +D A + M + H K+C W P+ +++GS
Sbjct: 183 RDLAFSPNDTKFVTASDDQTLKVFDFAGGSTDMTLTGHGWDAKSCDW--HPSRGLIVSGS 240
Query: 139 WDKTLKFWDLRTPQPIMTIN 158
D +K WD RT + + T++
Sbjct: 241 KDHLVKLWDPRTGRCLTTLH 260
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 56/326 (17%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ + FSP++L L +GS D VR W++ +G+ + QG + V VA+ DG+ +
Sbjct: 951 VRSVVFSPNSL---MLASGSSDQTVRLWDI-SSGECL-YIFQGHTGWVYSVAFNLDGSML 1005
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D+TV+ WD++S+Q + Q H + V++ + + + L +GS D+T++ WD+ +
Sbjct: 1006 ATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSV--VFSSDGAMLASGSDDQTVRLWDISS 1063
Query: 151 PQPIMTINLPERCYCADVDYPLAVVGTAG------------RGIVLYQLEGKPQEFK--- 195
+ T+ C + V P + +G G LY L+G +
Sbjct: 1064 GNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLV 1123
Query: 196 -----------KTESPLKY----QNRCIAIFRDKKK-------QPAGYGLGSVEGRVAIQ 233
++ ++ +C+ + P G L S G ++
Sbjct: 1124 FSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVR 1183
Query: 234 YVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDAR 293
+ ++ K + + H S VN +VF+P TLA+ S+ T W+ ++
Sbjct: 1184 LWDISSSKCLYILQGHTS-----------WVNSVVFNPDGSTLASGSSDQTVRLWEINSS 1232
Query: 294 TKLKPSEAMDMSISTCALNHNGQIFA 319
L + +++ N +G + A
Sbjct: 1233 KCLCTFQGHTSWVNSVVFNPDGSMLA 1258
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 35/281 (12%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L +GS D VR WE+ N + QG + V V + DG+ + DKTV+ WD++
Sbjct: 1215 LASGSSDQTVRLWEI--NSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDIS 1272
Query: 107 SNQSMQVAQHDAPVKTCHWIKA----PNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPER 162
S++ + Q +W+ + P+ + L +GS D+T++ W++ + + + T
Sbjct: 1273 SSKCLHTFQGHT-----NWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQ-GHT 1326
Query: 163 CYCADV----DYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQP 218
+ + V D + G+ + + L+ + + + L + N ++ P
Sbjct: 1327 SWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLY----TFLGHTNWVGSVIF----SP 1378
Query: 219 AGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLAT 278
G L S G ++ + ++ K +T + H + V IVF P LA+
Sbjct: 1379 DGAILASGSGDQTVRLWSISSGKCLYTLQGHNN-----------WVGSIVFSPDGTLLAS 1427
Query: 279 VGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
+ T W+ + L S+ + A + +G I A
Sbjct: 1428 GSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILA 1468
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 9/134 (6%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ + FSP L +GS D VR W + +GK + ++QG + V + + DGT +
Sbjct: 1371 VGSVIFSPDG---AILASGSGDQTVRLWSI-SSGKCL-YTLQGHNNWVGSIVFSPDGTLL 1425
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D+TV+ W+++S + + H V++ + + + L +GS D+T+K WD++T
Sbjct: 1426 ASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAF--SSDGLILASGSDDETIKLWDVKT 1483
Query: 151 PQPIMTINLPERCY 164
+ I T+ E+ Y
Sbjct: 1484 GECIKTLK-SEKIY 1496
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 8/136 (5%)
Query: 18 PNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSE 77
N + V + S+ +AFSP G VR WE GK + + +G +
Sbjct: 853 ANLAYSVFTKILGSVLTVAFSPDG---KLFATGDSGGIVRFWEA-ATGKELL-TCKGHNS 907
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMT 136
V V + DG + D+TV+ WD++S Q ++ + H + V++ + +PN L +
Sbjct: 908 WVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSV--VFSPNSLMLAS 965
Query: 137 GSWDKTLKFWDLRTPQ 152
GS D+T++ WD+ + +
Sbjct: 966 GSSDQTVRLWDISSGE 981
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
L +GS D VR W++ + + QG + V VA+ DG+ + D+TV+ W++
Sbjct: 1256 MLASGSSDKTVRLWDISSS--KCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEI 1313
Query: 106 ASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+S++ + Q H + V + + +P+ T L +GS D+T++ W + + + + T
Sbjct: 1314 SSSKCLHTFQGHTSWVSSVTF--SPDGTMLASGSDDQTVRLWSISSGECLYT 1363
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
L +GS D VR W++ +G+ + K+ +G + V V + + + D+TV+ WD+
Sbjct: 920 MLASGSDDQTVRLWDI-SSGQCL-KTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDI 977
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNY----TCLMTGSWDKTLKFWDLRTPQ 152
+S + + + Q W+ + + + L TGS D+T++ WD+ + Q
Sbjct: 978 SSGECLYIFQGHTG-----WVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+S + FSP L +GS D VR W + +G+ + + G + V V + DG +
Sbjct: 1329 VSSVTFSPDGT---MLASGSDDQTVRLWSI-SSGECL-YTFLGHTNWVGSVIFSPDGAIL 1383
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D+TV+ W ++S + + Q H+ V + + +P+ T L +GS D+T++ W++ +
Sbjct: 1384 ASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSI--VFSPDGTLLASGSDDQTVRLWNISS 1441
Query: 151 PQPIMTIN 158
+ + T++
Sbjct: 1442 GECLYTLH 1449
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCIE 228
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 77/206 (37%), Gaps = 25/206 (12%)
Query: 88 GTKVFMAGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
G + G D V W + N M + H +PV++ + P ++ GS +++ W
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR-LNTPE-ELIVAGSQSGSIRVW 90
Query: 147 DLRTPQPIMTINLPERCYCADVDYP---LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
DL + + T+ + C+ +P G+ I L+ + K F+ Y
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR-------Y 143
Query: 204 QNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYA 263
+ A+ R + P G L S ++ + K F H
Sbjct: 144 RGHSQAV-RCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG-----------P 191
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
VN + FHP LA+ S+ T FWD
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWD 217
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCIE 228
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 77/206 (37%), Gaps = 25/206 (12%)
Query: 88 GTKVFMAGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
G + G D V W + N M + H +PV++ + P ++ GS +++ W
Sbjct: 33 GRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVR-LNTPE-ELIVAGSQSGSIRVW 90
Query: 147 DLRTPQPIMTINLPERCYCADVDYP---LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
DL + + T+ + C+ +P G+ I L+ + K F+ Y
Sbjct: 91 DLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR-------Y 143
Query: 204 QNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYA 263
+ A+ R + P G L S ++ + K F H
Sbjct: 144 RGHSQAV-RCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG-----------P 191
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
VN + FHP LA+ S+ T FWD
Sbjct: 192 VNVVEFHPNEYLLASGSSDRTIRFWD 217
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ +AF PS +L++ S+D R W+V + + + +G SE + +A DG+ V
Sbjct: 268 VGRVAFHPSG---DYLVSASFDTTWRLWDVHTGVELLMQ--EGHSEGIFSIACQPDGSLV 322
Query: 92 FMAGCDKTVKCWDLASNQSMQVA-QHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
G D + WDL S +S+ V +H + W +PN L T S D T+K WDLR
Sbjct: 323 SSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAW--SPNGYQLATSSADDTVKIWDLRK 380
Query: 151 PQPIMTI 157
TI
Sbjct: 381 VSLAHTI 387
Score = 35.4 bits (80), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 34 CMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM 93
C A+ + Q L G+ DN V W+ + + ++G V VA+ G +
Sbjct: 226 CQAWDADS-EQLTLATGAADNTVCLWKASQSTPLL--RLEGHLARVGRVAFHPSGDYLVS 282
Query: 94 AGCDKTVKCWDLASNQSMQVAQ-HDAPVKT--CHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
A D T + WD+ + + + + H + + C P+ + + +G D + WDLR+
Sbjct: 283 ASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQ----PDGSLVSSGGNDAIGRIWDLRS 338
Query: 151 PQPIMTINLPERCYCA 166
+ IM ++ R A
Sbjct: 339 GKSIMVLDEHIRQIVA 354
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 3 GQPALSTTTTTSTPNPNK-DFEV---VSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
QP S++ T S P P K ++ + ++ ++S + FSP+ +L + S D ++
Sbjct: 15 AQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN---GEWLASSSADKLIKI 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HD 117
W +GK K++ G + DVAW D + A DKT+K WD++S + ++ + H
Sbjct: 72 WGAY-DGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
V C++ P +++GS+D++++ WD++T + + T+
Sbjct: 130 NYVFCCNF--NPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ D + WD AS Q ++ D PV + +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYS 244
Query: 150 TPQPIMT-INLPERCYCADVDYPLA-----VVGTAGRGIVLYQLEGK 190
+ + T YC ++ + V G+ + ++ L+ K
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 35.0 bits (79), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+++ S+D R W+ +G+ + + + PV V + +G + A D T+K WD
Sbjct: 185 LIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTC-----LMTGSWDKTLKFWDLRTPQPIMTI 157
+ + ++ K C + N++ +++GS D + W+L+T + + +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 40/308 (12%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLD 81
F ++ ED++ ++FSP + +G D ++ W+ T+ K++ G + V +
Sbjct: 1106 FRTLNGHEDAVYSVSFSPDG---QTIASGGSDKTIKLWQTSDG--TLLKTITGHEQTVNN 1160
Query: 82 VAWIDDGTKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
V + DG + A D ++K WD S Q M + H A V T + +P+ + GS D
Sbjct: 1161 VYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRF--SPDGQTIAAGSED 1218
Query: 141 KTLKFWDLRTPQPIMTINLPE---RCYCADVDYPLAVVGTAGRGIVLYQL-EGKPQEFKK 196
KT+K W + + + T+N + D +A + I L+++ +GK K
Sbjct: 1219 KTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGK---LVK 1275
Query: 197 TESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPK-DNFTFKCHRSNGGA 255
T LK N + D G + S I+ N + + FT G +
Sbjct: 1276 T---LKGHNDSV---WDVNFSSDGKAIASASRDNTIKLWNRHGIELETFT-------GHS 1322
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAM--DMSISTCALNH 313
GGV YAVN F P +A+ + T W R + P E + + + + H
Sbjct: 1323 GGV---YAVN---FLPDSNIIASASLDNTIRLWQ---RPLISPLEVLAGNSGVYAVSFLH 1373
Query: 314 NGQIFAYA 321
+G I A A
Sbjct: 1374 DGSIIATA 1381
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + ++ +D ++ ++FSP L + S D ++ W + +GK + K+++G ++ V
Sbjct: 1230 KLLKTLNGHQDWVNSLSFSPDG---KTLASASADKTIKLWRI-ADGKLV-KTLKGHNDSV 1284
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
DV + DG + A D T+K W+ + H V +++ P+ + + S
Sbjct: 1285 WDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFL--PDSNIIASASL 1342
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAG 179
D T++ W P+ + Y + +++ TAG
Sbjct: 1343 DNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAG 1382
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 8/128 (6%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + + ++ ++ + FSP L + S DN V+ W V +GK K+++G ++ V
Sbjct: 1437 KALKTLIGHDNEVNKVNFSPDG---KTLASASRDNTVKLWNVS-DGK-FKKTLKGHTDEV 1491
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWD-LASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGS 138
V++ DG + A DKT++ WD + N + H+ V + ++ P+ + L + S
Sbjct: 1492 FWVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNF--NPDGSMLASTS 1549
Query: 139 WDKTLKFW 146
DKT+K W
Sbjct: 1550 ADKTVKLW 1557
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
L + S D V+ W + + + G S V ++ DG + A DKTVK W +
Sbjct: 1544 MLASTSADKTVKLWR--SHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI 1601
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQ 152
+ + QH A V + I +P+ L++GS D T K W + Q
Sbjct: 1602 DGHLLTTLPQHQAGVMSA--IFSPDGKTLISGSLDTTTKIWRFDSQQ 1646
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 27 PPEDSISCMAFSPSTLPQYFLIAGS-WDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWI 85
P +I ++F+P Q LIA + D V+ W V +GK + K++ G V V +
Sbjct: 1402 PGNKAIYGISFTP----QGDLIASANADKTVKIWRVR-DGKAL-KTLIGHDNEVNKVNFS 1455
Query: 86 DDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLK 144
DG + A D TVK W+++ + + + W+ +P+ + + S DKT++
Sbjct: 1456 PDGKTLASASRDNTVKLWNVSDGKFKKTLK--GHTDEVFWVSFSPDGKIIASASADKTIR 1513
Query: 145 FWD 147
WD
Sbjct: 1514 LWD 1516
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 53 DNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ 112
D N++ W + ++ K++ G ++ + +++ G + A DKTVK W + ++++
Sbjct: 1384 DGNIQLWHSQDG--SLLKTLPG-NKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALK 1440
Query: 113 -VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ HD V ++ +P+ L + S D T+K W++
Sbjct: 1441 TLIGHDNEVNKVNF--SPDGKTLASASRDNTVKLWNV 1475
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 36 AFSPSTLPQYFLIA-GSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA 94
++ + LP +IA S DN +R W+ P + + V V+++ DG+ + A
Sbjct: 1325 VYAVNFLPDSNIIASASLDNTIRLWQ---RPLISPLEVLAGNSGVYAVSFLHDGSIIATA 1381
Query: 95 GCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI 154
G D ++ W ++ + + + P + + + DKT+K W +R + +
Sbjct: 1382 GADGNIQLWHSQDGSLLKTLPGNKAIYGISF--TPQGDLIASANADKTVKIWRVRDGKAL 1439
Query: 155 MTI 157
T+
Sbjct: 1440 KTL 1442
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 72 MQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNY 131
++G + V+ ++ DG + DKT+K W + H+ V + + +P+
Sbjct: 1068 LEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSF--SPDG 1125
Query: 132 TCLMTGSWDKTLKFWDLRTPQPIMTINLPERC 163
+ +G DKT+K W + TI E+
Sbjct: 1126 QTIASGGSDKTIKLWQTSDGTLLKTITGHEQT 1157
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 36 AFSPSTLPQYFLIAGSWDNNVRCWEVEPNG-KTIPKSMQGMSEPVLDVAWIDDGTKVFMA 94
+FSP ++ + S D V+ W+++ + T+P+ G V+ + DG +
Sbjct: 1579 SFSPDG---RYIASASEDKTVKIWQIDGHLLTTLPQHQAG----VMSAIFSPDGKTLISG 1631
Query: 95 GCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK 127
D T K W S Q+ + + C+W++
Sbjct: 1632 SLDTTTKIWRFDSQQAKTSQMNTLVMSACNWLQ 1664
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 3 GQPALSTTTTTSTPNPNK-DFEV---VSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
QP S++ T S P P K ++ + ++ ++S + FSP+ +L + S D ++
Sbjct: 15 AQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN---GEWLASSSADKLIKI 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HD 117
W +GK K++ G + DVAW D + A DKT+K WD++S + ++ + H
Sbjct: 72 WGAY-DGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
V C++ P +++GS+D++++ WD++T + + T+
Sbjct: 130 NYVFCCNF--NPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ D + WD AS Q ++ D PV + +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYS 244
Query: 150 TPQPIMT-INLPERCYCADVDYPLA-----VVGTAGRGIVLYQLEGK 190
+ + T YC ++ + V G+ + ++ L+ K
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+++ S+D R W+ +G+ + + + PV V + +G + A D T+K WD
Sbjct: 185 LIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTC-----LMTGSWDKTLKFWDLRTPQPIMTI 157
+ + ++ K C + N++ +++GS D + W+L+T + + +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 3 GQPALSTTTTTSTPNPNK-DFEV---VSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
QP S++ T S P P K ++ + ++ ++S + FSP+ +L + S D ++
Sbjct: 15 AQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN---GEWLASSSADKLIKI 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HD 117
W +GK K++ G + DVAW D + A DKT+K WD++S + ++ + H
Sbjct: 72 WGAY-DGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
V C++ P +++GS+D++++ WD++T + + T+
Sbjct: 130 NYVFCCNF--NPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ D + WD AS Q ++ D PV + +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYS 244
Query: 150 TPQPIMT-INLPERCYCADVDYPLA-----VVGTAGRGIVLYQLEGK 190
+ + T YC ++ + V G+ + ++ L+ K
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+++ S+D R W+ +G+ + + + PV V + +G + A D T+K WD
Sbjct: 185 LIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTC-----LMTGSWDKTLKFWDLRTPQPIMTI 157
+ + ++ K C + N++ +++GS D + W+L+T + + +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 12/160 (7%)
Query: 3 GQPALSTTTTTSTPNPNK-DFEV---VSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
QP S++ T S P P K ++ + ++ ++S + FSP+ +L + S D ++
Sbjct: 15 AQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPN---GEWLASSSADKLIKI 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HD 117
W +GK K++ G + DVAW D + A DKT+K WD++S + ++ + H
Sbjct: 72 WGAY-DGK-FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 129
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
V C++ P +++GS+D++++ WD++T + + T+
Sbjct: 130 NYVFCCNF--NPQSNLIVSGSFDESVRIWDVKTGKCLKTL 167
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ D + WD AS Q ++ D PV + +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYS 244
Query: 150 TPQPIMT-INLPERCYCADVDYPLA-----VVGTAGRGIVLYQLEGK 190
+ + T YC ++ + V G+ + ++ L+ K
Sbjct: 245 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 291
Score = 35.0 bits (79), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 9/117 (7%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+++ S+D R W+ +G+ + + + PV V + +G + A D T+K WD
Sbjct: 185 LIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTC-----LMTGSWDKTLKFWDLRTPQPIMTI 157
+ + ++ K C + N++ +++GS D + W+L+T + + +
Sbjct: 244 SKGKCLKTYTGHKNEKYCIF---ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL 297
>sp|Q54WA3|PEX7_DICDI Peroxisomal targeting signal 2 receptor OS=Dictyostelium discoideum
GN=pex7 PE=3 SV=1
Length = 316
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 3 GQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVE 62
G + T S P K FE + S+ + T I GSWD +++ W
Sbjct: 81 GSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTF-----ITGSWDQSIKIWN-- 133
Query: 63 PNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA-GCDKTVKCWDLASNQSMQ-VAQHDAPV 120
P K+ + + W +F + D+T+K WD N+S+ + HD +
Sbjct: 134 PRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLNTIKAHDHEI 193
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
TC W K N ++TGS DKT++ WD+R P TI
Sbjct: 194 LTCDWNKY-NDKEVVTGSVDKTIRIWDIRYPDRPTTI 229
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog
OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F +GS D N++ W++ G + +G + V + + DG V G D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKG--CIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI 154
+ + + + H+ +++ + P+ L TGS D+T+KFWDL T + I
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLETFELI 220
>sp|Q5F3D7|UTP15_CHICK U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus
gallus GN=UTP15 PE=2 SV=1
Length = 520
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
L+AGS + ++R +++ +G+ + G ++ V V ++ D ++F G D + WD+
Sbjct: 94 LLVAGSEEGSIRLFDI--SGRAPLRQFDGHTKAVHVVGFLSDKYRIFSGGDDYSSSLWDI 151
Query: 106 -ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
++ + + ++H V+ C N +TGS+D T+K +D RT +MTI
Sbjct: 152 PSATEIVSYSEHSDYVR-CGCASKLNGDVFITGSYDHTVKVFDARTKSSVMTIE 204
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 69/147 (46%), Gaps = 8/147 (5%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ +AFSP + +GS D ++ W+ T ++++G V VA+ DG +V
Sbjct: 1138 VHSVAFSPDG---QRVASGSIDGTIKIWDAASG--TCTQTLEGHGGWVQSVAFSPDGQRV 1192
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
DKT+K WD AS Q + H V++ + +P+ + +GS D T+K WD +
Sbjct: 1193 ASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAF--SPDGQRVASGSSDNTIKIWDTAS 1250
Query: 151 PQPIMTINLPERCYCADVDYPLAVVGT 177
T+N+ C DY A + T
Sbjct: 1251 GTCTQTLNVGSTATCLSFDYTNAYINT 1277
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 121/306 (39%), Gaps = 50/306 (16%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ +AFSP + +GS D+ ++ W+ T ++++G VL VA+ DG +V
Sbjct: 928 VQSVAFSPDG---QRVASGSDDHTIKIWDAASG--TCTQTLEGHGSSVLSVAFSPDGQRV 982
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
DKT+K WD AS Q + H V + + +P+ + +GS DKT+K WD +
Sbjct: 983 ASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAF--SPDGQRVASGSDDKTIKIWDTAS 1040
Query: 151 PQPIMTINLP-------------ERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
T+ +R D+ + + A G LEG
Sbjct: 1041 GTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIK-IWDAVSGTCTQTLEGHGDSVWS- 1098
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGG 257
+A D ++ + GS++G + I D + C ++ G GG
Sbjct: 1099 ----------VAFSPDGQRVAS----GSIDGTIKIW--------DAASGTCTQTLEGHGG 1136
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
V+ + F P +A+ +GT WD + T + E + + A + +GQ
Sbjct: 1137 -----WVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 1191
Query: 318 FAYAVS 323
A S
Sbjct: 1192 VASGSS 1197
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
DS+ +AFSP + +GS D ++ W+ T ++++G V VA+ DG
Sbjct: 1094 DSVWSVAFSPDG---QRVASGSIDGTIKIWDAASG--TCTQTLEGHGGWVHSVAFSPDGQ 1148
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+V D T+K WD AS Q + H V++ + +P+ + +GS DKT+K WD
Sbjct: 1149 RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAF--SPDGQRVASGSSDKTIKIWD 1205
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 26 SPPEDSISCMAFSP--STLPQYFLIAG-SWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
+P + S + F+P S + + F W + + E E N T ++++G VL V
Sbjct: 790 APLQAYTSALVFAPTDSMIKKIFKKEEPGWISTISVVEAEWNACT--QTLEGHGSSVLSV 847
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDK 141
A+ DG +V DKT+K WD AS Q + H V + + +P+ + +GS DK
Sbjct: 848 AFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAF--SPDRERVASGSDDK 905
Query: 142 TLKFWD 147
T+K WD
Sbjct: 906 TIKIWD 911
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 119/307 (38%), Gaps = 50/307 (16%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
S+ +AFSP + +GS D ++ W+ T ++++G V VA+ DG +
Sbjct: 969 SVLSVAFSPDG---QRVASGSGDKTIKIWDTASG--TCTQTLEGHGGSVWSVAFSPDGQR 1023
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
V DKT+K WD AS Q + H V++ + +P+ + +GS D T+K WD
Sbjct: 1024 VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSV--VFSPDGQRVASGSDDHTIKIWDAV 1081
Query: 150 TPQPIMTINLP-------------ERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKK 196
+ T+ +R +D + + A G LEG
Sbjct: 1082 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIK-IWDAASGTCTQTLEGHGGWV-- 1138
Query: 197 TESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAG 256
+A D ++ + GS++G + I D + C ++ G G
Sbjct: 1139 ---------HSVAFSPDGQRVAS----GSIDGTIKIW--------DAASGTCTQTLEGHG 1177
Query: 257 GVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQ 316
G V + F P +A+ S+ T WD + T + E + + A + +GQ
Sbjct: 1178 G-----WVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQ 1232
Query: 317 IFAYAVS 323
A S
Sbjct: 1233 RVASGSS 1239
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
S+ +AFSP + + +GS D ++ W+ T ++++G V VA+ DG +
Sbjct: 885 SVWSVAFSPD---RERVASGSDDKTIKIWDAASG--TCTQTLEGHGGRVQSVAFSPDGQR 939
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
V D T+K WD AS Q + H + V + + +P+ + +GS DKT+K WD
Sbjct: 940 VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAF--SPDGQRVASGSGDKTIKIWD 995
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 49 AGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASN 108
+GS D ++ W+ T ++++G V VA+ D +V DKT+K WD AS
Sbjct: 858 SGSDDKTIKIWDTASGTGT--QTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASG 915
Query: 109 QSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
Q + H V++ + +P+ + +GS D T+K WD
Sbjct: 916 TCTQTLEGHGGRVQSVAF--SPDGQRVASGSDDHTIKIWD 953
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS + F P +L +GS D+N++ W+V G +G ++ V +A+ DG
Sbjct: 107 SISSLDFHPM---GEYLASGSVDSNIKLWDVRRKGCVF--RYKGHTQAVRCLAFSPDGKW 161
Query: 91 VFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ A D TVK WDL + + + + H + V + PN L +GS D+T+K WDL
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF--HPNEYLLASGSADRTVKLWDL 218
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 109/312 (34%), Gaps = 72/312 (23%)
Query: 6 ALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEV-EPN 64
AL+ TT TS K E+V+ + +S + S+ L G D V W V +PN
Sbjct: 2 ALTNTTITSW----KLQEIVAHSSN-VSSLVLGKSS--GRLLATGGEDCRVNIWAVSKPN 54
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTC 123
S+ G + V + + +V +++ WDL + + ++ H A + +
Sbjct: 55 ---CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSL 111
Query: 124 HWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIV 183
+ Y L +GS D +K WD+R R
Sbjct: 112 DFHPMGEY--LASGSVDSNIKLWDVR------------------------------RKGC 139
Query: 184 LYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDN 243
+++ +G Q RC+A P G L S ++ + K
Sbjct: 140 VFRYKGHTQAV-----------RCLAF------SPDGKWLASASDDSTVKLWDLIAGKMI 182
Query: 244 FTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMD 303
F H S AVN + FHP LA+ ++ T WD + + SE
Sbjct: 183 TEFTSHTS-----------AVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGET 231
Query: 304 MSISTCALNHNG 315
+ + N +G
Sbjct: 232 GVVRSVLFNPDG 243
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 25/260 (9%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D + +AFSP L +GS D VR W+V + +G + VLD+A+ DG+
Sbjct: 502 DWVRAVAFSPD---GALLASGSDDATVRLWDVAAAEER--AVFEGHTHYVLDIAFSPDGS 556
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
V D T + W++A+ V + H V + +P+ + + +GS D T++ WD+
Sbjct: 557 MVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAF--SPDGSMVASGSRDGTIRLWDV 614
Query: 149 RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCI 208
T + + P + P + G ++ + E T R +
Sbjct: 615 ATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAV 674
Query: 209 AIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIV 268
A P G L S I+ + A +++ T + H V+ +
Sbjct: 675 AF------SPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTE-----------PVHSVA 717
Query: 269 FHPVHGTLATVGSEGTFSFW 288
FHP TLA+ +GT W
Sbjct: 718 FHPEGTTLASASEDGTIRIW 737
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 19 NKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEP 78
K+ +V+ P +++ +AFSP L+ GS D+ V W+V +G+ + + +G ++
Sbjct: 617 GKERDVLQAPAENVVSLAFSPD---GSMLVHGS-DSTVHLWDVA-SGEAL-HTFEGHTDW 670
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTG 137
V VA+ DG + D+T++ WD+A+ + + H PV + + P T L +
Sbjct: 671 VRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAF--HPEGTTLASA 728
Query: 138 SWDKTLKFWDLRT 150
S D T++ W + T
Sbjct: 729 SEDGTIRIWPIAT 741
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 53 DNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ 112
D + W+V + +++G ++ V VA+ DG + D TV+ WD+A+ +
Sbjct: 480 DKLIHVWDVASGDEL--HTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERA 537
Query: 113 VAQHDAPVKTCHWIK----APNYTCLMTGSWDKTLKFWDLRT 150
V + H++ +P+ + + +GS D T + W++ T
Sbjct: 538 VFE-----GHTHYVLDIAFSPDGSMVASGSRDGTARLWNVAT 574
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
ED ++ +A SP + F+ AGS D +VR W++ + G + V VA+ DG
Sbjct: 427 EDGVTTVAISPD---KQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDG 483
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA--------------PNYTCL 134
+ DKT+K W+L++ + + + AP K IK P+ +
Sbjct: 484 RNLVSGSLDKTIKMWELSAPRGIPSS---APPKGGRCIKTFEGHRDFVLSVALTPDSQWV 540
Query: 135 MTGSWDKTLKFWDLRT 150
++GS D+ ++FWD RT
Sbjct: 541 LSGSKDRGVQFWDPRT 556
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I + FSP +L G+ D +R W+++ +TI + G + + + + DG +
Sbjct: 347 IRSVCFSPDG---KYLATGAEDKLIRVWDIQ--SRTIRNTFHGHEQDIYSLDFSRDGRTI 401
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
D+TV+ WD+ + Q+ V + V T +P+ + GS DK+++ WD+R
Sbjct: 402 ASGSGDRTVRLWDIETGQNTSVLSIEDGVTTV--AISPDKQFVAAGSLDKSVRVWDMR 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+ +GS D VR W++E T S+ + + V VA D V DK+V+ WD+
Sbjct: 401 IASGSGDRTVRLWDIETGQNT---SVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMR 457
Query: 107 SNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
+ ++ D + + + +P+ L++GS DKT+K W+L P+ I + P+ C
Sbjct: 458 GYLAERLEGPDGHKDSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRC 517
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 17/132 (12%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVE----------PNGKTIPKSMQGMSEP 78
+DS+ +AFSP L++GS D ++ WE+ P G K+ +G +
Sbjct: 471 KDSVYSVAFSPDG---RNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDF 527
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTC--HWIKAPN-YTCL 134
VL VA D V D+ V+ WD + + + Q H V + + PN
Sbjct: 528 VLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPVTGPNGVGYF 587
Query: 135 MTGSWDKTLKFW 146
TGS D + W
Sbjct: 588 ATGSGDMRARIW 599
>sp|P46800|GBLP_DICDI Guanine nucleotide-binding protein subunit beta-like protein
OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2
Length = 329
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWDN +R W++ T + +G ++ V+ VA+ D ++ D T+K W+
Sbjct: 84 FALSGSWDNTLRLWDITKGVST--RLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNT 141
Query: 106 ASNQSMQVAQHDAPVKTCHWIK----APNYTCLMTGSWDKTLKFWDLRTPQ--------- 152
+ + P W+ +PN +++GSWD +K WD+++ +
Sbjct: 142 LGECKFTL---EGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHT 198
Query: 153 -PIMTINL-PERCYCADVDY-PLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
+ T+ + P+ CA A + G LY+LE + SP KY
Sbjct: 199 GYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINALAFSPNKY 252
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 9/133 (6%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D +SC+ FSP+T P +++GSWDN V+ W+++ ++ + V V DG
Sbjct: 156 QDWVSCIRFSPNT-PT--IVSGSWDNKVKIWDIK--SFKCNHTLTDHTGYVNTVTISPDG 210
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ G D W+L+S + + + + + +PN L + DK + WDL
Sbjct: 211 SLCASGGKDTFACLWELSSGKPLYKLEARNTINALAF--SPNKYWLSAATDDKII-IWDL 267
Query: 149 RTPQPIMTINLPE 161
T Q + I +PE
Sbjct: 268 LTKQVLAEI-VPE 279
>sp|Q86VZ2|WDR5B_HUMAN WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1
Length = 330
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 86/161 (53%), Gaps = 12/161 (7%)
Query: 3 GQPALSTTTTTSTP---NPNKDFE-VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
Q ALS++ S NPN + + +++S + FSP+ +L + S D +
Sbjct: 11 AQLALSSSANQSKEVPENPNYALKCTLVGHTEAVSSVKFSPN---GEWLASSSADRLIII 67
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HD 117
W +GK K++ G + + DVAW D +++ A DKT+K WD+ S + ++ + H
Sbjct: 68 WGAY-DGK-YEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHS 125
Query: 118 APVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
V C++ P +++GS+D+T+K W+++T + + T++
Sbjct: 126 NYVFCCNF--NPPSNLIISGSFDETVKIWEVKTGKCLKTLS 164
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P P +I+GS+D V+ WEV+ GK + K++ S+PV V + G+ +
Sbjct: 128 VFCCNFNP---PSNLIISGSFDETVKIWEVKT-GKCL-KTLSAHSDPVSAVHFNCSGSLI 182
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
D + WD AS Q ++ D PV + +PN ++T + D TLK WD
Sbjct: 183 VSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKF--SPNGKYILTATLDNTLKLWDYS 240
Query: 150 TPQPIMT-INLPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 241 RGRCLKTYTGHKNEKYCIFANFSV----TGGKWIV 271
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 66/143 (46%), Gaps = 12/143 (8%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + +S D +S + F+ S +++GS+D R W+ +G+ + + + PV
Sbjct: 158 KCLKTLSAHSDPVSAVHFNCS---GSLIVSGSYDGLCRIWDA-ASGQCLKTLVDDDNPPV 213
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTC-----L 134
V + +G + A D T+K WD + + ++ K C + N++ +
Sbjct: 214 SFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIF---ANFSVTGGKWI 270
Query: 135 MTGSWDKTLKFWDLRTPQPIMTI 157
++GS D + W+L+T + + +
Sbjct: 271 VSGSEDNLVYIWNLQTKEIVQKL 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,045,567
Number of Sequences: 539616
Number of extensions: 6781941
Number of successful extensions: 21417
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 901
Number of HSP's that attempted gapping in prelim test: 16011
Number of HSP's gapped (non-prelim): 4558
length of query: 356
length of database: 191,569,459
effective HSP length: 118
effective length of query: 238
effective length of database: 127,894,771
effective search space: 30438955498
effective search space used: 30438955498
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)