Your job contains 1 sequence.
>psy12911
MFGQPALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE
VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV
KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGR
GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP
KDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSE
AMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRSGS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12911
(356 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034646 - symbol:Rae1 "Rae1" species:7227 "Drosoph... 1369 6.3e-140 1
UNIPROTKB|E1C7F8 - symbol:Gga.22300 "Uncharacterized prot... 1338 1.2e-136 1
UNIPROTKB|P78406 - symbol:RAE1 "mRNA export factor" speci... 1328 1.4e-135 1
UNIPROTKB|Q5E9A4 - symbol:RAE1 "mRNA export factor" speci... 1325 2.9e-135 1
UNIPROTKB|E2RSV2 - symbol:RAE1 "Uncharacterized protein" ... 1325 2.9e-135 1
UNIPROTKB|A5GFN6 - symbol:RAE1 "mRNA export factor" speci... 1325 2.9e-135 1
ZFIN|ZDB-GENE-040426-1029 - symbol:rae1 "RAE1 RNA export ... 1323 4.7e-135 1
MGI|MGI:1913929 - symbol:Rae1 "RAE1 RNA export 1 homolog ... 1322 6.0e-135 1
RGD|1311540 - symbol:Rae1 "RAE1 RNA export 1 homolog (S. ... 1321 7.7e-135 1
UNIPROTKB|Q7ZZY7 - symbol:Rae1/Gle2 "Rae1/Gle2" species:8... 1320 9.8e-135 1
WB|WBGene00003803 - symbol:rae-1 species:6239 "Caenorhabd... 966 3.2e-97 1
TAIR|locus:2025732 - symbol:RAE1 "AT1G80670" species:3702... 811 8.5e-81 1
DICTYBASE|DDB_G0283835 - symbol:rae1 "putative mRNA expor... 806 2.9e-80 1
POMBASE|SPBC16A3.05c - symbol:rae1 "RNA export factor, nu... 786 3.8e-78 1
ASPGD|ASPL0000060741 - symbol:sonA species:162425 "Emeric... 768 3.1e-76 1
UNIPROTKB|G4NDD2 - symbol:MGG_00946 "Poly(A)+ RNA export ... 764 8.1e-76 1
SGD|S000000909 - symbol:GLE2 "RNA export factor associate... 763 1.0e-75 1
UNIPROTKB|E1BVV3 - symbol:Gga.22300 "Uncharacterized prot... 750 2.5e-74 1
CGD|CAL0001281 - symbol:orf19.1095 species:5476 "Candida ... 530 2.0e-73 2
UNIPROTKB|Q59QW3 - symbol:GLE2 "Likely WD40 repeat nuclea... 530 2.0e-73 2
FB|FBgn0034838 - symbol:CG12782 species:7227 "Drosophila ... 602 1.2e-58 1
UNIPROTKB|Q1JQB2 - symbol:BUB3 "Mitotic checkpoint protei... 536 1.2e-51 1
UNIPROTKB|O43684 - symbol:BUB3 "Mitotic checkpoint protei... 536 1.2e-51 1
UNIPROTKB|F2Z5F3 - symbol:BUB3 "Uncharacterized protein" ... 536 1.2e-51 1
MGI|MGI:1343463 - symbol:Bub3 "budding uninhibited by ben... 536 1.2e-51 1
UNIPROTKB|Q5RB58 - symbol:BUB3 "Mitotic checkpoint protei... 534 1.9e-51 1
ZFIN|ZDB-GENE-041010-210 - symbol:bub3 "BUB3 budding unin... 532 3.1e-51 1
UNIPROTKB|Q5ZHW3 - symbol:BUB3 "Uncharacterized protein" ... 524 2.2e-50 1
UNIPROTKB|J3QT28 - symbol:BUB3 "Mitotic checkpoint protei... 495 2.6e-47 1
UNIPROTKB|E1C9E5 - symbol:BUB3 "Uncharacterized protein" ... 470 1.2e-44 1
DICTYBASE|DDB_G0292134 - symbol:bub3 "putative mitotic ch... 441 1.4e-41 1
TAIR|locus:2091211 - symbol:BUB3.1 "AT3G19590" species:37... 428 3.3e-40 1
UNIPROTKB|B0QZ36 - symbol:RAE1 "mRNA export factor" speci... 420 2.3e-39 1
UNIPROTKB|B4DDM6 - symbol:BUB3 "cDNA FLJ57899, highly sim... 417 4.8e-39 1
TAIR|locus:2007248 - symbol:BUB3.2 "AT1G49910" species:37... 411 2.1e-38 1
POMBASE|SPAC23H3.08c - symbol:bub3 "mitotic spindle check... 395 1.0e-36 1
WB|WBGene00013209 - symbol:bub-3 species:6239 "Caenorhabd... 377 8.3e-35 1
UNIPROTKB|Q9XWH0 - symbol:bub-3 "Protein BUB-3" species:6... 377 8.3e-35 1
FB|FBgn0025457 - symbol:Bub3 "Bub3" species:7227 "Drosoph... 354 2.3e-32 1
ASPGD|ASPL0000047688 - symbol:sldB species:162425 "Emeric... 332 4.9e-30 1
UNIPROTKB|G4N5H8 - symbol:MGG_06111 "Mitotic checkpoint p... 322 5.6e-29 1
TAIR|locus:2036159 - symbol:AT1G15850 "AT1G15850" species... 281 1.2e-24 1
TAIR|locus:2026446 - symbol:AT1G69400 "AT1G69400" species... 277 3.3e-24 1
UNIPROTKB|B0QZ37 - symbol:RAE1 "mRNA export factor" speci... 204 3.6e-16 1
SGD|S000005552 - symbol:BUB3 "Kinetochore checkpoint WD40... 210 4.1e-15 1
CGD|CAL0003474 - symbol:BUB3 species:5476 "Candida albica... 186 4.7e-12 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 147 2.6e-10 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 165 1.0e-09 1
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 158 1.1e-09 2
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 142 1.8e-09 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 145 2.4e-09 2
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 151 3.6e-09 2
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 158 4.0e-09 2
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 158 4.0e-09 2
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 159 4.0e-09 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 136 4.1e-09 2
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 146 4.2e-09 2
POMBASE|SPAC6B12.15 - symbol:cpc2 "RACK1 ortholog Cpc2" s... 143 5.2e-09 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 136 5.9e-09 2
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 145 6.2e-09 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 145 6.3e-09 2
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 149 6.3e-09 2
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 145 6.3e-09 2
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 146 6.7e-09 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 137 7.5e-09 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 140 8.4e-09 2
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 159 9.4e-09 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 139 1.1e-08 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 138 1.1e-08 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 136 1.3e-08 2
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 155 1.3e-08 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 144 1.3e-08 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 154 1.7e-08 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 153 1.8e-08 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 153 2.3e-08 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 153 2.3e-08 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 153 2.3e-08 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 153 2.3e-08 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 153 2.3e-08 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 153 2.3e-08 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 141 2.6e-08 2
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 139 2.6e-08 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 153 2.8e-08 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 159 3.2e-08 1
UNIPROTKB|Q3MHE2 - symbol:PRPF4 "U4/U6 small nuclear ribo... 126 3.4e-08 2
UNIPROTKB|O43172 - symbol:PRPF4 "U4/U6 small nuclear ribo... 126 3.4e-08 2
UNIPROTKB|F1PZB0 - symbol:PRPF4 "Uncharacterized protein"... 126 3.7e-08 2
UNIPROTKB|I3LDL8 - symbol:PRPF4 "Uncharacterized protein"... 126 3.8e-08 2
MGI|MGI:1917302 - symbol:Prpf4 "PRP4 pre-mRNA processing ... 126 4.3e-08 2
RGD|1311303 - symbol:Prpf4 "PRP4 pre-mRNA processing fact... 126 4.3e-08 2
ZFIN|ZDB-GENE-050417-342 - symbol:nsmaf "neutral sphingom... 157 4.7e-08 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 152 5.6e-08 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 154 6.1e-08 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 154 6.4e-08 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 154 6.4e-08 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 154 6.4e-08 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 154 6.4e-08 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 154 6.5e-08 1
CGD|CAL0000650 - symbol:orf19.2307 species:5476 "Candida ... 127 7.5e-08 2
UNIPROTKB|Q59WJ4 - symbol:PFS2 "Polyadenylation factor su... 127 7.5e-08 2
WARNING: Descriptions of 386 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034646 [details] [associations]
symbol:Rae1 "Rae1" species:7227 "Drosophila melanogaster"
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0051297
"centrosome organization" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045886 "negative regulation of synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0010506 "regulation of
autophagy" evidence=IMP] [GO:0005643 "nuclear pore" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005635 GO:GO:0051297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:2000045 EMBL:AY118568
UniGene:Dm.11463 ProteinModelPortal:Q7JVX4 STRING:Q7JVX4
PaxDb:Q7JVX4 PRIDE:Q7JVX4 FlyBase:FBgn0034646 InParanoid:Q7JVX4
OrthoDB:EOG42NGFW ArrayExpress:Q7JVX4 Bgee:Q7JVX4 Uniprot:Q7JVX4
Length = 360
Score = 1369 (487.0 bits), Expect = 6.3e-140, P = 6.3e-140
Identities = 241/333 (72%), Positives = 276/333 (82%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
DFEV SPP+DS+S + FSPST+ + FL+AGSWD+ VRCWEVE NG T+PKSM+ M PVL
Sbjct: 27 DFEVASPPDDSVSALEFSPSTVQKNFLVAGSWDSTVRCWEVEQNGATVPKSMKTMGGPVL 86
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
DV W DDG+KVF+A CDK VK WDLAS+Q MQVA HD PVKTCH +K P YTCLMTGSWD
Sbjct: 87 DVCWSDDGSKVFVASCDKQVKLWDLASDQVMQVAAHDGPVKTCHMVKGPTYTCLMTGSWD 146
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
KTLKFWD R+P P+MTINLPERCYCADV+YP+AVVGTA RG+++Y L+ P E+K+ ESP
Sbjct: 147 KTLKFWDTRSPNPMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEYKRQESP 206
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQD 260
LKYQ+R I+IFRDKKK+P G LGS+EGRVAIQYVNP NPKDNFTFKCHR+ G G QD
Sbjct: 207 LKYQHRAISIFRDKKKEPTGCALGSIEGRVAIQYVNPGNPKDNFTFKCHRTTG-TSGYQD 265
Query: 261 IYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAY 320
IYAVN I FHPVHGTL TVGS+GTFSFWDKDARTKLK SE MD SI+ C N NGQIFAY
Sbjct: 266 IYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSITKCGFNANGQIFAY 325
Query: 321 AVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPR 353
AV YDWSKGHE+ NP K IFLR C++++KPR
Sbjct: 326 AVGYDWSKGHEYFNPAKKPQIFLRSCYDELKPR 358
>UNIPROTKB|E1C7F8 [details] [associations]
symbol:Gga.22300 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 OMA:RVAIQYV EMBL:AADN02018984
IPI:IPI00818815 ProteinModelPortal:E1C7F8
Ensembl:ENSGALT00000012397 ArrayExpress:E1C7F8 Uniprot:E1C7F8
Length = 368
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 238/337 (70%), Positives = 275/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV SPP+DSISC+AFSP TLP FLIAGSW N+VRCWEV+ NG+TIPK+ Q + PV
Sbjct: 30 KDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LD W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDGCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+P P+MT+ LPERCYCADV +P+A V TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSPTPMMTLQLPERCYCADVVHPMAAVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKVNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>UNIPROTKB|P78406 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9606 "Homo
sapiens" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0003723 "RNA binding"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005640
"nuclear outer membrane" evidence=TAS] [GO:0005643 "nuclear pore"
evidence=TAS] [GO:0005856 "cytoskeleton" evidence=TAS] [GO:0006406
"mRNA export from nucleus" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 EMBL:CH471077 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0016032 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0044281 GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005643 GO:GO:0019221 GO:GO:0015758
GO:GO:0010827 GO:GO:0055085 GO:GO:0003723 GO:GO:0006406
GO:GO:0008017 GO:GO:0005640 GO:GO:0071407 HOVERGEN:HBG002942
KO:K14298 EMBL:AL109955 EMBL:AL135939 PDB:3MMY PDBsum:3MMY CTD:8480
OrthoDB:EOG4XD3R8 EMBL:U84720 EMBL:U85943 EMBL:AY349350
EMBL:AK292247 EMBL:BC103754 EMBL:BC106924 EMBL:BC106923
IPI:IPI00019733 RefSeq:NP_001015885.1 RefSeq:NP_003601.1
UniGene:Hs.371698 ProteinModelPortal:P78406 SMR:P78406
DIP:DIP-41063N IntAct:P78406 MINT:MINT-121447 STRING:P78406
PhosphoSite:P78406 DMDM:3122666 PaxDb:P78406 PRIDE:P78406
Ensembl:ENST00000371242 Ensembl:ENST00000395840
Ensembl:ENST00000395841 GeneID:8480 KEGG:hsa:8480 UCSC:uc002xyg.3
GeneCards:GC20P055926 HGNC:HGNC:9828 HPA:HPA018242 MIM:603343
neXtProt:NX_P78406 PharmGKB:PA34182 InParanoid:P78406
PhylomeDB:P78406 EvolutionaryTrace:P78406 GenomeRNAi:8480
NextBio:31729 ArrayExpress:P78406 Bgee:P78406 CleanEx:HS_RAE1
Genevestigator:P78406 GermOnline:ENSG00000101146 Uniprot:P78406
Length = 368
Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
Identities = 235/337 (69%), Positives = 275/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL+SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>UNIPROTKB|Q5E9A4 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV EMBL:BT021016
EMBL:BC111248 IPI:IPI00690618 RefSeq:NP_001015585.1
UniGene:Bt.46468 ProteinModelPortal:Q5E9A4 STRING:Q5E9A4
PRIDE:Q5E9A4 Ensembl:ENSBTAT00000014523 GeneID:513080
KEGG:bta:513080 CTD:8480 InParanoid:Q5E9A4 OrthoDB:EOG4XD3R8
NextBio:20870693 Uniprot:Q5E9A4
Length = 368
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 235/337 (69%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>UNIPROTKB|E2RSV2 [details] [associations]
symbol:RAE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 KO:K14298 OMA:RVAIQYV CTD:8480
EMBL:AAEX03014037 RefSeq:XP_543066.2 ProteinModelPortal:E2RSV2
Ensembl:ENSCAFT00000019134 GeneID:485942 KEGG:cfa:485942
NextBio:20859833 Uniprot:E2RSV2
Length = 368
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 235/337 (69%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>UNIPROTKB|A5GFN6 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9823 "Sus scrofa"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:CR956362 RefSeq:NP_001098766.1
UniGene:Ssc.2778 ProteinModelPortal:A5GFN6 STRING:A5GFN6
Ensembl:ENSSSCT00000008215 Ensembl:ENSSSCT00000036296
GeneID:100125839 KEGG:ssc:100125839 Uniprot:A5GFN6
Length = 368
Score = 1325 (471.5 bits), Expect = 2.9e-135, P = 2.9e-135
Identities = 235/337 (69%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D IS C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>ZFIN|ZDB-GENE-040426-1029 [details] [associations]
symbol:rae1 "RAE1 RNA export 1 homolog (S. pombe)"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1029
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063440
HOVERGEN:HBG002942 HSSP:P26449 HOGENOM:HOG000208823 KO:K14298
OMA:RVAIQYV CTD:8480 OrthoDB:EOG4XD3R8 EMBL:BC049445 EMBL:BC065853
IPI:IPI00501635 RefSeq:NP_957292.1 UniGene:Dr.75426
ProteinModelPortal:Q7ZWF0 STRING:Q7ZWF0 PRIDE:Q7ZWF0
Ensembl:ENSDART00000020333 GeneID:393973 KEGG:dre:393973
InParanoid:Q6P037 NextBio:20814944 ArrayExpress:Q7ZWF0 Bgee:Q7ZWF0
Uniprot:Q7ZWF0
Length = 368
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 230/337 (68%), Positives = 276/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV SPP+DSISC+AFSP T+P FLI GSW N+VRCWEV+ NG+T+PK+ Q + PV
Sbjct: 30 KDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQH+ P++T HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+P P+M++ +PERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTAT 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVN I FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D I+ C NHNG I
Sbjct: 270 PQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE+ NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRN 366
>MGI|MGI:1913929 [details] [associations]
symbol:Rae1 "RAE1 RNA export 1 homolog (S. pombe)"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071407 "cellular
response to organic cyclic compound" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913929 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:AK079383 EMBL:AK146058 EMBL:AK156681
EMBL:BC059051 IPI:IPI00225719 RefSeq:NP_780321.1 UniGene:Mm.4113
ProteinModelPortal:Q8C570 SMR:Q8C570 IntAct:Q8C570 STRING:Q8C570
PhosphoSite:Q8C570 PaxDb:Q8C570 PRIDE:Q8C570
Ensembl:ENSMUST00000029013 GeneID:66679 KEGG:mmu:66679
InParanoid:Q8C570 NextBio:322353 Bgee:Q8C570 CleanEx:MM_RAE1
Genevestigator:Q8C570 GermOnline:ENSMUSG00000027509 Uniprot:Q8C570
Length = 368
Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
Identities = 234/337 (69%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D I+ C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>RGD|1311540 [details] [associations]
symbol:Rae1 "RAE1 RNA export 1 homolog (S. pombe)" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0071407 "cellular response to organic
cyclic compound" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311540 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063440 HOVERGEN:HBG002942
HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV CTD:8480
OrthoDB:EOG4XD3R8 EMBL:BC104721 EMBL:BC105758 IPI:IPI00357999
RefSeq:NP_001028880.1 UniGene:Rn.14600 ProteinModelPortal:Q3SWS8
STRING:Q3SWS8 PRIDE:Q3SWS8 Ensembl:ENSRNOT00000038182 GeneID:362281
KEGG:rno:362281 UCSC:RGD:1311540 InParanoid:Q3SWS8 NextBio:679325
Genevestigator:Q3SWS8 GermOnline:ENSRNOG00000021295 Uniprot:Q3SWS8
Length = 368
Score = 1321 (470.1 bits), Expect = 7.7e-135, P = 7.7e-135
Identities = 233/337 (69%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LDV W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+ P+M + LPERCYCADV YP+AVV TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+AIF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVNGI FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D ++ C NHNG I
Sbjct: 270 PQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPVAACGFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAYA SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>UNIPROTKB|Q7ZZY7 [details] [associations]
symbol:Rae1/Gle2 "Rae1/Gle2" species:8355 "Xenopus laevis"
[GO:0005515 "protein binding" evidence=IPI] [GO:0008017
"microtubule binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 HOVERGEN:HBG002942 EMBL:BC077196
EMBL:AY256464 RefSeq:NP_001083956.1 UniGene:Xl.56581 IntAct:Q7ZZY7
GeneID:399210 KEGG:xla:399210 CTD:399210 Uniprot:Q7ZZY7
Length = 368
Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
Identities = 232/337 (68%), Positives = 274/337 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV SPP+DSISC++FSP TLP FLIAGSW N+VRCWEV+ NG+TIPK+ Q + PV
Sbjct: 30 KDIEVASPPDDSISCLSFSPQTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
DV W DDGTKVF A CDKT K WDL SNQS+Q+AQHDAP+KT HW+KAPNY+C+MTGSW
Sbjct: 90 QDVCWSDDGTKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+P P+++I LPER YCADV YP+AVV TA RG+++YQLE +P EF++ +S
Sbjct: 150 DKTLKFWDTRSPNPLLSIQLPERGYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDS 209
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP-KDNFTFKCHRSNG-GAGG 257
PLK+Q+RC+ IF+DK+ +P G+ LGS+EGRVAI Y+NP NP KDNFTFKCHRSNG
Sbjct: 210 PLKHQHRCVGIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTAA 269
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
QDIYAVN I FHPVHGTLATVGS+G FSFWDKDARTKLK SE +D I+ C NHNG I
Sbjct: 270 PQDIYAVNDIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCFNHNGNI 329
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
FAY+ SYDWSKGHE NP K N IFLR E++KPR+
Sbjct: 330 FAYSSSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRN 366
>WB|WBGene00003803 [details] [associations]
symbol:rae-1 species:6239 "Caenorhabditis elegans"
[GO:0040013 "negative regulation of locomotion" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 GO:GO:0040013 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040011 GO:GO:0005643 GO:GO:0040035
GO:GO:0051028 GeneTree:ENSGT00530000063440 HOGENOM:HOG000208823
KO:K14298 EMBL:Z80216 PIR:T20723 RefSeq:NP_492650.1
ProteinModelPortal:Q93454 SMR:Q93454 STRING:Q93454 PaxDb:Q93454
EnsemblMetazoa:F10G8.3.1 EnsemblMetazoa:F10G8.3.2 GeneID:172864
KEGG:cel:CELE_F10G8.3 UCSC:F10G8.3.1 CTD:172864 WormBase:F10G8.3
eggNOG:NOG240406 InParanoid:Q93454 OMA:RVAIQYV NextBio:877323
Uniprot:Q93454
Length = 373
Score = 966 (345.1 bits), Expect = 3.2e-97, P = 3.2e-97
Identities = 187/359 (52%), Positives = 230/359 (64%)
Query: 1 MFGQPALXXXXXXXXXXXXK--DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRC 58
MFG + + DF V PED+I + FSP+ + L GSWD +R
Sbjct: 12 MFGGSNISTSTTTPAANTTQNDDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRV 71
Query: 59 WEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDA 118
W K+ Q + P+LD+AWI+D +K+F+A DK + WDLASNQ V HD
Sbjct: 72 WMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLASNQVAVVGTHDG 131
Query: 119 PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT-P-QPIMT-INLPERCYCADVDYPLAVV 175
PVKTCHWI NY CLMTGS+DKTL+FWD++ P Q M I LPER Y ADV YP+AVV
Sbjct: 132 PVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVV 191
Query: 176 GTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQ-PAGYGLGSVEGRVAIQY 234
A + I +Y LE P E K ES LK+Q RCI+IF+DK Q PAG+ LGS+EGRVA+QY
Sbjct: 192 ALANKHIKVYNLENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQY 251
Query: 235 VNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDART 294
V+ ANPKDNFTFKCHRS G Q+IYAVN I FHP HGTL T+GS+G +S WDKDART
Sbjct: 252 VDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDART 311
Query: 295 KLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPR 353
KLK SE M ++ C ++ +G YA+ YDWS+GHE N G+ I + C EDMKPR
Sbjct: 312 KLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHE-GNTQPGSKIVIHKCIEDMKPR 369
>TAIR|locus:2025732 [details] [associations]
symbol:RAE1 "AT1G80670" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC011713 EMBL:U53501
GO:GO:0080008 HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV
EMBL:AY087683 IPI:IPI00547787 PIR:A96839 PIR:S71241
RefSeq:NP_178182.1 UniGene:At.24472 ProteinModelPortal:Q38942
SMR:Q38942 IntAct:Q38942 STRING:Q38942 PaxDb:Q38942 PRIDE:Q38942
EnsemblPlants:AT1G80670.1 GeneID:844406 KEGG:ath:AT1G80670
GeneFarm:2856 TAIR:At1g80670 InParanoid:Q38942 PhylomeDB:Q38942
ProtClustDB:CLSN2681924 Genevestigator:Q38942 GermOnline:AT1G80670
Uniprot:Q38942
Length = 349
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 159/345 (46%), Positives = 213/345 (61%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTI---PKSMQGMS 76
K +EV P DSIS ++FSP L+A SWDN VRCWE+ +G ++ PK+
Sbjct: 16 KSYEVTPSPADSISSLSFSPRA---DILVATSWDNQVRCWEISRSGASLASAPKASISHD 72
Query: 77 EPVLDVAWIDDGTKVFMAGCDKTVKCWDLASN-QSMQVAQHDAPVKTCHWIKAPNYTCLM 135
+PVL AW DDGT VF GCDK K W L S Q + VA H+ P+ WI P L
Sbjct: 73 QPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWI--PGMNLLA 130
Query: 136 TGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFK 195
TGSWDKTLK+WD R P+ T LP++CY V +PL VVGTA R ++++ L+ EFK
Sbjct: 131 TGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFK 190
Query: 196 KTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGA 255
+ +SPLKYQ RC+ F D++ G+ +GS+EGRV + +++ + NFTFKCHR
Sbjct: 191 RIQSPLKYQTRCVTAFPDQQ----GFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDGN-- 244
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
DIY+VN + FHPVHGT AT GS+G F+FWDKD++ +LK + I + NH+G
Sbjct: 245 ----DIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDG 300
Query: 316 QIFAYAVSYDWSKGHEHNNPNKG-NAIFLR-PCFEDMK--PRSGS 356
I+AYA YDWSKG E++NP ++IFL P ++K PR G+
Sbjct: 301 SIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGA 345
>DICTYBASE|DDB_G0283835 [details] [associations]
symbol:rae1 "putative mRNA export protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0016973 "poly(A)+ mRNA export from
nucleus" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0283835 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003723 EMBL:AAFI02000057 GO:GO:0016973 KO:K14298 OMA:RVAIQYV
RefSeq:XP_638901.1 ProteinModelPortal:Q54QH0 STRING:Q54QH0
PRIDE:Q54QH0 EnsemblProtists:DDB0237902 GeneID:8624298
KEGG:ddi:DDB_G0283835 Uniprot:Q54QH0
Length = 342
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 156/334 (46%), Positives = 214/334 (64%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKT-IPKSMQGMSEPV 79
D E+ SPP D +SC+ FSP F++AGSWD VRCWE+ P+ K+ +PK++ +
Sbjct: 13 DIELSSPPSDGVSCLKFSPKA--NNFIVAGSWDQKVRCWEINPSTKSSMPKAIISHDAAI 70
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
L W DGTKVF G D KCW+LA+NQ +QVAQH AP+K C WI+ N L+T SW
Sbjct: 71 LCTDWSGDGTKVFTGGVDGKGKCWNLATNQMVQVAQHTAPIKECFWIEESNV--LVTASW 128
Query: 140 DKTLKFWDLR--TPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
DKTLK+WD R T P++++ L ER Y D+ YPL V TA + I +Y L+ +K
Sbjct: 129 DKTLKYWDTRQQTGTPVLSLELTERIYAMDMLYPLLAVATADKKIYIYDLKNPQSPYKTV 188
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGG 257
+S LK+Q RCI+ F DK +G+ LGS+EGRVAIQ ++ + +++FTFKCHR N
Sbjct: 189 DSLLKFQTRCISCFPDK----SGFALGSIEGRVAIQSLDDSKQENSFTFKCHRENDTVA- 243
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
YAVN I F +GT AT GS+G FSFWDK+++ +LK + SIST N + +
Sbjct: 244 ----YAVNNISFALPYGTFATAGSDGGFSFWDKESKFRLKQFSKLPQSISTATFNLDASL 299
Query: 318 FAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMK 351
+AYA SYDWSKG ++ +PN+ N+IF+R ++ K
Sbjct: 300 YAYASSYDWSKGSQYFDPNQPNSIFVRVVGDEAK 333
>POMBASE|SPBC16A3.05c [details] [associations]
symbol:rae1 "RNA export factor, nucleoporin Rae1"
species:4896 "Schizosaccharomyces pombe" [GO:0000054 "ribosomal
subunit export from nucleus" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=ISO;IDA] [GO:0006606 "protein
import into nucleus" evidence=TAS] [GO:0010389 "regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IMP] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC16A3.05c Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005643 GenomeReviews:CU329671_GR
GO:GO:0006606 GO:GO:0010389 GO:GO:0016973 HOGENOM:HOG000208823
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 GO:GO:0000054 EMBL:U14951
PIR:A56119 RefSeq:NP_596784.1 ProteinModelPortal:P41838
DIP:DIP-59117N STRING:P41838 PRIDE:P41838
EnsemblFungi:SPBC16A3.05c.1 GeneID:2539741 KEGG:spo:SPBC16A3.05c
NextBio:20800892 Uniprot:P41838
Length = 352
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 165/355 (46%), Positives = 213/355 (60%)
Query: 1 MFGQPALXXXXXXXXXXXXKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWE 60
+FGQ A KD EV PPEDSIS +AFSP +Y L A SWD+ VR +E
Sbjct: 3 LFGQ-ATTSTVSNATGDLKKDVEVAQPPEDSISDLAFSPQA--EY-LAASSWDSKVRIYE 58
Query: 61 VEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPV 120
V+ G++I K++ PVL V W DGTKV DK+ K +D+ + Q+ QVA HD V
Sbjct: 59 VQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAV 118
Query: 121 KTCHWIKAPNYT-CLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAG 179
+ +++A + L TGSWDKTLK+WDLR PI T++LPER Y D +PL V TA
Sbjct: 119 RCVRFVEAMGTSPILATGSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAE 178
Query: 180 RGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPAN 239
R I + L + FK SPLK+Q R +A F + GY +GSVEGR AIQ ++ N
Sbjct: 179 RNICVINLSEPTKIFKLAMSPLKFQTRSLACFI----KGDGYAIGSVEGRCAIQNIDEKN 234
Query: 240 PKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPS 299
NF+F+CHR+ AG D+Y+VN I FHP +GT +T GS+GTFSFWDKD+ +LK
Sbjct: 235 ASQNFSFRCHRNQ--AGNSADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSY 292
Query: 300 EAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFED-MKPR 353
+ +IS N G IFAYA+SYDWSKG+ NN N I L P +D +KPR
Sbjct: 293 PNVGGTISCSTFNRTGDIFAYAISYDWSKGYTFNNAQLPNKIMLHPVPQDEIKPR 347
>ASPGD|ASPL0000060741 [details] [associations]
symbol:sonA species:162425 "Emericella nidulans"
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0010389 "regulation of G2/M transition of mitotic cell cycle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:BN001308
EMBL:AACD01000019 HOGENOM:HOG000208823 KO:K14298 OMA:RVAIQYV
RefSeq:XP_658983.1 ProteinModelPortal:G5EAY9
EnsemblFungi:CADANIAT00001229 GeneID:2877155 KEGG:ani:AN1379.2
Uniprot:G5EAY9
Length = 362
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 162/364 (44%), Positives = 217/364 (59%)
Query: 1 MFGQPA-LXXXXXXXXXXXXKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCW 59
+FG A KD + SPPEDSIS + FSP++ ++ +A SWD VR +
Sbjct: 4 LFGATANTSTAASNTTGDISKDVALNSPPEDSISDLRFSPAS--EHLAVA-SWDKKVRIY 60
Query: 60 EVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQS--MQVAQHD 117
E+ G++ K++ PVL+ W DGTKV AG DK + DLA+N + +QVA HD
Sbjct: 61 EINEQGQSEGKALFEHEAPVLNCCWSPDGTKVVGAGADKAARMLDLAANATAPIQVAAHD 120
Query: 118 APVKTCHWIKAP--NYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVV 175
AP++ CH I P L+TGSWDK +K+WDLR PI ++ ER Y DV L V+
Sbjct: 121 APIRCCHMIPNPAGGTPLLVTGSWDKQVKYWDLRQSTPIASLECQERVYTMDVKDKLLVI 180
Query: 176 GTAGRGIVLYQLEGKPQEFKKT-ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQY 234
GTA R I + L P +F KT +SPLK+Q R ++ F D G+ +GS+EGR AIQY
Sbjct: 181 GTADRYINIVDLNN-PTKFYKTMQSPLKWQTRVVSCFTDAN----GFAVGSIEGRCAIQY 235
Query: 235 VNPANPKDNFTFKCHRSNG-GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDAR 293
V + NF+FKCHR + +IY+VN I FHPVHGT +T G++GTF FWDKDA+
Sbjct: 236 VEDKDSSSNFSFKCHRETPPNQRDINNIYSVNAISFHPVHGTFSTAGADGTFHFWDKDAK 295
Query: 294 TKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCF-EDMKP 352
+LK ++ +IS+ A N G IFAYAVSYDWSKG+ N P N + L P E++KP
Sbjct: 296 HRLKGYPSVGGTISSTAFNRTGNIFAYAVSYDWSKGYSANTPQLPNKVMLHPVAQEEVKP 355
Query: 353 RSGS 356
R +
Sbjct: 356 RQNA 359
>UNIPROTKB|G4NDD2 [details] [associations]
symbol:MGG_00946 "Poly(A)+ RNA export protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:CM001235 GO:GO:0005643 GO:GO:0016973 KO:K14298
GO:GO:0031081 GO:GO:0000973 GO:GO:2000728 RefSeq:XP_003718005.1
ProteinModelPortal:G4NDD2 EnsemblFungi:MGG_00946T0 GeneID:2674766
KEGG:mgr:MGG_00946 Uniprot:G4NDD2
Length = 358
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 156/336 (46%), Positives = 203/336 (60%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQY-FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
D + +PPEDSIS +AF+P+ Q FL SWD VR +EV NG K PV
Sbjct: 23 DVAIANPPEDSISDLAFNPNQADQKDFLAVSSWDKKVRIYEVLGNGTAEGKHAYEHDGPV 82
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
V + DGTK+ G DK K D+ + Q+ QVAQH+ PV++ W ++TGSW
Sbjct: 83 FSVDYYKDGTKIVSGGADKQAKVCDMNTGQTAQVAQHEKPVRSVRWFDNNGSPMVITGSW 142
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT-E 198
DKT+K+WDLR P+ T+ ER Y DV L V+GTA R I + L +PQ+F KT +
Sbjct: 143 DKTVKYWDLRQQSPVATLQCQERVYTMDVRDKLLVIGTADRYINVVNLN-EPQKFYKTLQ 201
Query: 199 SPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGV 258
SPLK+Q R ++ F D G+ +GS+EGR AIQYV + NF+FKCHR + G V
Sbjct: 202 SPLKWQTRVVSCFTDAN----GFAIGSIEGRCAIQYVEDKDSSSNFSFKCHR-DAPQGSV 256
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
++AVN I FHPVHGT +T GS+GTF FWDKDA+ +LK + SI+ N NG IF
Sbjct: 257 TSVHAVNDISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYPNVGGSITATTFNKNGNIF 316
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFED-MKPR 353
AYAVSYDW+KG++ NN N + L P +D KPR
Sbjct: 317 AYAVSYDWAKGYQGNNSTYPNKVMLHPVQQDECKPR 352
>SGD|S000000909 [details] [associations]
symbol:GLE2 "RNA export factor associated with the nuclear
pore complex (NPC)" species:4932 "Saccharomyces cerevisiae"
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0000973 "posttranscriptional
tethering of RNA polymerase II gene DNA at nuclear periphery"
evidence=IMP] [GO:0000972 "transcription-dependent tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IMP] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000909 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
GO:GO:0031965 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:BK006939 EMBL:U18839
GeneTree:ENSGT00530000063440 TCDB:9.A.14.1.1 GO:GO:0016973
EMBL:AY692884 PIR:S50610 RefSeq:NP_011033.3 RefSeq:NP_011037.3
ProteinModelPortal:P40066 SMR:P40066 DIP:DIP-2452N IntAct:P40066
MINT:MINT-483363 STRING:P40066 PaxDb:P40066 PeptideAtlas:P40066
EnsemblFungi:YER107C GeneID:856844 GeneID:856848 KEGG:sce:YER107C
KEGG:sce:YER112W CYGD:YER107c HOGENOM:HOG000208823 KO:K12623
KO:K14298 OMA:RCITCAP OrthoDB:EOG4C5GT5 NextBio:983165
Genevestigator:P40066 GermOnline:YER107C GO:GO:0031081
GO:GO:0000973 GO:GO:2000728 Uniprot:P40066
Length = 365
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 150/342 (43%), Positives = 204/342 (59%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
D + SP EDSIS +AFSP + A SWD VR W+V+ NG ++ S PVL
Sbjct: 28 DIVINSPAEDSISDIAFSPQQ--DFMFSASSWDGKVRIWDVQ-NGVPQGRAQHESSSPVL 84
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYT-CLMTGS 138
W +DGTKV GCD +K +D+AS Q+ Q+ H AP+K +++ P+ T C++TGS
Sbjct: 85 CTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTGS 144
Query: 139 WDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTE 198
WDKT+K+WD+R PQP+ T+ +PER Y D L VV TA R I + L FK T
Sbjct: 145 WDKTIKYWDMRQPQPVSTVMMPERVYSMDNKQSLLVVATAERHIAIINLANPTTIFKATT 204
Query: 199 SPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPA-NPKDNFTFKCHRSNG---- 253
SPLK+Q RC+A + + GY +GSVEGR +I+Y++ K F+FKCHR
Sbjct: 205 SPLKWQTRCVACYNEAD----GYAIGSVEGRCSIRYIDDGMQKKSGFSFKCHRQTNPNRA 260
Query: 254 -GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALN 312
G+ G +Y VN I FHP++GT T G +GTF+FWDK+ R +LK + SI C+ N
Sbjct: 261 PGSNGQSLVYPVNSIAFHPLYGTFVTAGGDGTFNFWDKNQRHRLKGYPTLQASIPVCSFN 320
Query: 313 HNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCF-EDMKPR 353
NG +FAYA+SYDW +GH N P+ N I L E++K +
Sbjct: 321 RNGSVFAYALSYDWHQGHMGNRPDYPNVIRLHATTDEEVKEK 362
>UNIPROTKB|E1BVV3 [details] [associations]
symbol:Gga.22300 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071407
GeneTree:ENSGT00530000063440 EMBL:AADN02018984 IPI:IPI00593441
ProteinModelPortal:E1BVV3 Ensembl:ENSGALT00000038968
ArrayExpress:E1BVV3 Uniprot:E1BVV3
Length = 214
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 130/185 (70%), Positives = 155/185 (83%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV SPP+DSISC+AFSP TLP FLIAGSW N+VRCWEV+ NG+TIPK+ Q + PV
Sbjct: 30 KDIEVTSPPDDSISCLAFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
LD W DDG+KVF A CDKT K WDL SNQ++Q+AQHDAPVKT HWIKAPNY+C+MTGSW
Sbjct: 90 LDGCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSW 149
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DKTLKFWD R+P P+MT+ LPERCYCADV +P+A V TA RG+++YQLE +P EF++ ES
Sbjct: 150 DKTLKFWDTRSPTPMMTLQLPERCYCADVVHPMAAVATAERGLIVYQLENQPSEFRRIES 209
Query: 200 PLKYQ 204
PLK+Q
Sbjct: 210 PLKHQ 214
>CGD|CAL0001281 [details] [associations]
symbol:orf19.1095 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031081
"nuclear pore distribution" evidence=IEA] [GO:0016973 "poly(A)+
mRNA export from nucleus" evidence=IEA] [GO:0010389 "regulation of
G2/M transition of mitotic cell cycle" evidence=IEA] [GO:2000728
"regulation of mRNA export from nucleus in response to heat stress"
evidence=IEA] [GO:0000973 "posttranscriptional tethering of RNA
polymerase II gene DNA at nuclear periphery" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0001281 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000168
EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1 RefSeq:XP_712107.1
ProteinModelPortal:Q59QW3 STRING:Q59QW3 GeneID:3646293
GeneID:3646319 KEGG:cal:CaO19.1095 KEGG:cal:CaO19.8697
Uniprot:Q59QW3
Length = 383
Score = 530 (191.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 106/238 (44%), Positives = 145/238 (60%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPV 79
D + +PPEDSI ++FSP Q L SWD VR +E++PN G + ++M PV
Sbjct: 28 DITINNPPEDSIEDISFSPQ---QDLLAVASWDKKVRIYEIDPNSGNNMGRAMYEHEAPV 84
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYT-CLMTG 137
W DGTK+ G D VK +DLA+ Q+ Q+ QHD+ VK+ +++ P T + +G
Sbjct: 85 FSSRWSIDGTKIISGGADNQVKIFDLATQQAQQIGQHDSAVKSVRYVECGPTNTQVIASG 144
Query: 138 SWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
SWDKTLK+WD+R+PQP+ TINLPER Y D L VVG A R I + L Q FK +
Sbjct: 145 SWDKTLKYWDMRSPQPVSTINLPERVYSMDNSQKLLVVGCADRHISIIDLNNPQQIFKSS 204
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKD-NFTFKCHRSNGG 254
+SPLK+Q RC++ + Q G+ +GS+EGR AIQY+ K F+FKCHR +GG
Sbjct: 205 QSPLKWQTRCVSCY----PQANGFAVGSIEGRCAIQYITENEQKKFGFSFKCHRKSGG 258
Score = 230 (86.0 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 262 YAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
Y+VN I FHP++GT +T GS+GTF FWDKDA+ +LK + +IS A N G IFAYA
Sbjct: 288 YSVNAISFHPIYGTFSTAGSDGTFCFWDKDAKQRLKSFPELPGAISATAFNKTGTIFAYA 347
Query: 322 VSYDWSKGHEHNNPNKGNAIFL 343
+SYDWS G+ N + N I L
Sbjct: 348 ISYDWSLGYMGNRQDYPNIIKL 369
>UNIPROTKB|Q59QW3 [details] [associations]
symbol:GLE2 "Likely WD40 repeat nuclear pore protein Gle2p"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001281 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000168 EMBL:AACQ01000169 KO:K14298 RefSeq:XP_712083.1
RefSeq:XP_712107.1 ProteinModelPortal:Q59QW3 STRING:Q59QW3
GeneID:3646293 GeneID:3646319 KEGG:cal:CaO19.1095
KEGG:cal:CaO19.8697 Uniprot:Q59QW3
Length = 383
Score = 530 (191.6 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 106/238 (44%), Positives = 145/238 (60%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPV 79
D + +PPEDSI ++FSP Q L SWD VR +E++PN G + ++M PV
Sbjct: 28 DITINNPPEDSIEDISFSPQ---QDLLAVASWDKKVRIYEIDPNSGNNMGRAMYEHEAPV 84
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYT-CLMTG 137
W DGTK+ G D VK +DLA+ Q+ Q+ QHD+ VK+ +++ P T + +G
Sbjct: 85 FSSRWSIDGTKIISGGADNQVKIFDLATQQAQQIGQHDSAVKSVRYVECGPTNTQVIASG 144
Query: 138 SWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
SWDKTLK+WD+R+PQP+ TINLPER Y D L VVG A R I + L Q FK +
Sbjct: 145 SWDKTLKYWDMRSPQPVSTINLPERVYSMDNSQKLLVVGCADRHISIIDLNNPQQIFKSS 204
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKD-NFTFKCHRSNGG 254
+SPLK+Q RC++ + Q G+ +GS+EGR AIQY+ K F+FKCHR +GG
Sbjct: 205 QSPLKWQTRCVSCY----PQANGFAVGSIEGRCAIQYITENEQKKFGFSFKCHRKSGG 258
Score = 230 (86.0 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 43/82 (52%), Positives = 55/82 (67%)
Query: 262 YAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
Y+VN I FHP++GT +T GS+GTF FWDKDA+ +LK + +IS A N G IFAYA
Sbjct: 288 YSVNAISFHPIYGTFSTAGSDGTFCFWDKDAKQRLKSFPELPGAISATAFNKTGTIFAYA 347
Query: 322 VSYDWSKGHEHNNPNKGNAIFL 343
+SYDWS G+ N + N I L
Sbjct: 348 ISYDWSLGYMGNRQDYPNIIKL 369
>FB|FBgn0034838 [details] [associations]
symbol:CG12782 species:7227 "Drosophila melanogaster"
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AY089281
ProteinModelPortal:Q8T4A6 SMR:Q8T4A6 IntAct:Q8T4A6 STRING:Q8T4A6
PRIDE:Q8T4A6 FlyBase:FBgn0034838 InParanoid:Q8T4A6
OrthoDB:EOG44XGZC ArrayExpress:Q8T4A6 Bgee:Q8T4A6 Uniprot:Q8T4A6
Length = 336
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 126/329 (38%), Positives = 187/329 (56%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+D+E+ +PP D+IS + FSP + + AGSWDN VR WEV+ + + +PK M +
Sbjct: 13 QDYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVRIWEVQAD-RLVPKVMNSLEGTP 71
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
D+ W D G KV+++ V WDL SNQ +V H +TCHW+ P Y L T SW
Sbjct: 72 FDLTWNDSGNKVYLSDSSGQVTEWDLESNQLRKVGLHARAARTCHWV-GP-Y--LATTSW 127
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTES 199
DK+++FWD R + + LP+R Y ADV +AVV R I+ Y L G P E + +S
Sbjct: 128 DKSIRFWDPRAAIELTRMELPDRSYAADVLNDVAVVACGDRSILAYTLRGGPVEQGRMKS 187
Query: 200 PLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQ 259
P + + ++ + + + + G V Q + A+ +F +CHR G+
Sbjct: 188 PGESNTQVRSVALHQNRDLTSWLIAKTNGMVFDQSM--AHRTVSFPIRCHRRENS--GIL 243
Query: 260 DIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
D+YAVN + + V +ATVGS+G F FWD R+KL S+ I+ CA++ +G++FA
Sbjct: 244 DVYAVNEVKVNMVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCAISGDGKLFA 303
Query: 320 YAVSYDWSKGHEHNNPNKGNAIFLRPCFE 348
YA+ YDWSKGHE+++ + IFLRP FE
Sbjct: 304 YALGYDWSKGHEYSDSSIKPHIFLRP-FE 331
>UNIPROTKB|Q1JQB2 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9913
"Bos taurus" [GO:0051983 "regulation of chromosome segregation"
evidence=ISS] [GO:0071173 "spindle assembly checkpoint"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0008608
"attachment of spindle microtubules to kinetochore" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0007126 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070 GO:GO:0008608
GO:GO:0051983 GO:GO:0000777 GO:GO:0071173 EMBL:BT030579
EMBL:BC116090 IPI:IPI00701223 RefSeq:NP_001069645.1
UniGene:Bt.26981 ProteinModelPortal:Q1JQB2 SMR:Q1JQB2 STRING:Q1JQB2
PRIDE:Q1JQB2 Ensembl:ENSBTAT00000057027 GeneID:539594
KEGG:bta:539594 CTD:9184 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS
OrthoDB:EOG4R7VB2 NextBio:20878093 ArrayExpress:Q1JQB2
Uniprot:Q1JQB2
Length = 326
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 126/338 (37%), Positives = 183/338 (54%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMDDTEH--PEDG--IFIRQVTDAETKPKS 325
>UNIPROTKB|O43684 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9606
"Homo sapiens" [GO:0007126 "meiosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0051983 "regulation of chromosome
segregation" evidence=IEA] [GO:0000777 "condensed chromosome
kinetochore" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0071173 "spindle assembly checkpoint"
evidence=IDA] [GO:0008608 "attachment of spindle microtubules to
kinetochore" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000087 "M
phase of mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_6850 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005634 GO:GO:0007126
Reactome:REACT_115566 Reactome:REACT_21300 GO:GO:0000776
GO:GO:0051301 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CH471066 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000070 EMBL:AC012391 GO:GO:0051436
GO:GO:0008608 Reactome:REACT_8017 GO:GO:0031145 GO:GO:0000236
GO:GO:0051983 GO:GO:0000777 CTD:9184 HOGENOM:HOG000208822
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS OrthoDB:EOG4R7VB2
EMBL:AF047472 EMBL:AF047473 EMBL:AF053304 EMBL:AF081496
EMBL:AK312546 EMBL:BC005138 EMBL:BC022438 IPI:IPI00013468
IPI:IPI00514701 RefSeq:NP_001007794.1 RefSeq:NP_004716.1
UniGene:Hs.418533 ProteinModelPortal:O43684 SMR:O43684
DIP:DIP-24205N IntAct:O43684 MINT:MINT-5005850 STRING:O43684
PhosphoSite:O43684 PaxDb:O43684 PRIDE:O43684 DNASU:9184
Ensembl:ENST00000368858 Ensembl:ENST00000368865 GeneID:9184
KEGG:hsa:9184 UCSC:uc001lhd.2 UCSC:uc001lhe.2 GeneCards:GC10P124903
HGNC:HGNC:1151 HPA:HPA003601 MIM:603719 neXtProt:NX_O43684
PharmGKB:PA25467 InParanoid:O43684 PhylomeDB:O43684 ChiTaRS:Bub3
GenomeRNAi:9184 NextBio:34433 ArrayExpress:O43684 Bgee:O43684
CleanEx:HS_BUB3 Genevestigator:O43684 GermOnline:ENSG00000154473
Uniprot:O43684
Length = 328
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 126/338 (37%), Positives = 183/338 (54%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMDDTEH--PEDG--IFIRQVTDAETKPKS 325
>UNIPROTKB|F2Z5F3 [details] [associations]
symbol:BUB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071173 "spindle assembly checkpoint" evidence=IEA]
[GO:0051983 "regulation of chromosome segregation" evidence=IEA]
[GO:0008608 "attachment of spindle microtubules to kinetochore"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070
GO:GO:0008608 GO:GO:0051983 GO:GO:0071173 CTD:9184
GeneTree:ENSGT00530000063440 KO:K02180 OMA:NAISFHS EMBL:CU468341
RefSeq:XP_003359438.1 UniGene:Ssc.9930 ProteinModelPortal:F2Z5F3
SMR:F2Z5F3 IntAct:F2Z5F3 PRIDE:F2Z5F3 Ensembl:ENSSSCT00000011737
GeneID:100156053 KEGG:ssc:100156053 Uniprot:F2Z5F3
Length = 328
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 126/338 (37%), Positives = 183/338 (54%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMDDTEH--PEDG--IFIRQVTDAETKPKS 325
>MGI|MGI:1343463 [details] [associations]
symbol:Bub3 "budding uninhibited by benzimidazoles 3 homolog
(S. cerevisiae)" species:10090 "Mus musculus" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0000776
"kinetochore" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0008608 "attachment of spindle microtubules to
kinetochore" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051983 "regulation of chromosome segregation"
evidence=IDA] [GO:0071173 "spindle assembly checkpoint"
evidence=ISO;IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1343463 GO:GO:0005634 GO:GO:0007126
GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070
GO:GO:0008608 GO:GO:0051983 GO:GO:0000777 GO:GO:0071173 CTD:9184
GeneTree:ENSGT00530000063440 HOGENOM:HOG000208822
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS OrthoDB:EOG4R7VB2
EMBL:AF149822 EMBL:U67327 EMBL:AK088534 EMBL:BC025089
IPI:IPI00626752 RefSeq:NP_033904.2 UniGene:Mm.441749 UniGene:Mm.927
ProteinModelPortal:Q9WVA3 SMR:Q9WVA3 IntAct:Q9WVA3 STRING:Q9WVA3
PhosphoSite:Q9WVA3 REPRODUCTION-2DPAGE:Q9WVA3 PaxDb:Q9WVA3
PRIDE:Q9WVA3 Ensembl:ENSMUST00000084502 GeneID:12237 KEGG:mmu:12237
InParanoid:Q6ZWM5 NextBio:280670 Bgee:Q9WVA3 Genevestigator:Q9WVA3
GermOnline:ENSMUSG00000066979 Uniprot:Q9WVA3
Length = 326
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 126/338 (37%), Positives = 183/338 (54%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMDDTEH--PEDG--IFIRQVTDAETKPKS 325
>UNIPROTKB|Q5RB58 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9601
"Pongo abelii" [GO:0051983 "regulation of chromosome segregation"
evidence=ISS] [GO:0071173 "spindle assembly checkpoint"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0007126 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051983
GO:GO:0000777 GO:GO:0071173 CTD:9184 HOVERGEN:HBG002942 KO:K02180
EMBL:CR858797 RefSeq:NP_001125579.1 UniGene:Pab.19158
ProteinModelPortal:Q5RB58 GeneID:100172494 KEGG:pon:100172494
InParanoid:Q5RB58 Uniprot:Q5RB58
Length = 328
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 126/338 (37%), Positives = 182/338 (53%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P + TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMATGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFLNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH +H T AT GS+G + WD + +L SI++ A +++G
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 291
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G IF+R + + KP+S
Sbjct: 292 AIASSYMYEMDDTEH--PEDG--IFIRQVTDAETKPKS 325
>ZFIN|ZDB-GENE-041010-210 [details] [associations]
symbol:bub3 "BUB3 budding uninhibited by
benzimidazoles 3 homolog (yeast)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-041010-210
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 CTD:9184 GeneTree:ENSGT00530000063440
HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS EMBL:CU694280
EMBL:AY391411 IPI:IPI00488477 RefSeq:NP_991272.1 UniGene:Dr.78635
STRING:Q6TNV6 Ensembl:ENSDART00000130726 GeneID:403012
KEGG:dre:403012 NextBio:20816819 Uniprot:Q6TNV6
Length = 326
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 122/337 (36%), Positives = 187/337 (55%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PEDS+S + FSPS+ FL+ SWD +VR ++ N + Q ++ PVL
Sbjct: 6 EFKLAQGPEDSVSAVKFSPSS--SQFLLVSSWDGSVRLYDASANSMRM--KYQHLA-PVL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P L+TGSWD
Sbjct: 61 DCAF-SDPTHAWSGGLDSQLKTHDLNTDQDTIVGTHDAPIRCVEF--CPEVNVLVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
++++ WD RTP T PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QSVRLWDPRTPCNAGTFTQPEKVYTLSVAGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR G+
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSLEVQKKKYAFKCHRLK--ENGI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ +Y VN I FH VH T AT GS+G + WD + +L SI++ + + +G +
Sbjct: 232 EQVYPVNAISFHSVHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPSSIASLSFSTDGSLL 291
Query: 319 AYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY G + ++P +A+F+R + + KP+S
Sbjct: 292 AIASSYMQELG-DVSHP--ADAVFIRQVTDAETKPKS 325
>UNIPROTKB|Q5ZHW3 [details] [associations]
symbol:BUB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008608 "attachment of spindle
microtubules to kinetochore" evidence=IEA] [GO:0051983 "regulation
of chromosome segregation" evidence=IEA] [GO:0071173 "spindle
assembly checkpoint" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000070 GO:GO:0008608
GO:GO:0051983 GO:GO:0071173 CTD:9184 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 HOVERGEN:HBG002942 KO:K02180 OMA:NAISFHS
EMBL:AADN02078913 EMBL:AADN02078914 EMBL:AADN02078915
EMBL:AADN02078916 EMBL:AADN02078917 EMBL:AJ721021 IPI:IPI00587104
RefSeq:NP_001006506.1 UniGene:Gga.4735 STRING:Q5ZHW3
Ensembl:ENSGALT00000015758 Ensembl:ENSGALT00000032994 GeneID:423949
KEGG:gga:423949 InParanoid:Q5ZHW3 NextBio:20826345 Uniprot:Q5ZHW3
Length = 329
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 124/338 (36%), Positives = 182/338 (53%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ P+D IS + FSP+T FL+ SWD VR ++V N + G VL
Sbjct: 9 EFKLNQTPDDGISSVKFSPNT--SQFLLVSSWDTTVRLYDVPANSMRLKYQHSGA---VL 63
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D+ +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 64 DCAFYDP-THAWSGGLDQQLKMHDLNTDQENLVGGHDAPIRCVEY--CPEVNVMVTGSWD 120
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 121 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 180
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 181 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEIQKKKYAFKCHRLK--ENNI 234
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
+ IY VN I FH VH T AT GS+G + WD + +L SI++ A +++G
Sbjct: 235 EQIYPVNAISFHNVHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTL 294
Query: 319 AYAVSYDWSKGH-EHNNPNKGNAIFLRPCFE-DMKPRS 354
A A SY + EH P G I++R + + KP+S
Sbjct: 295 AIASSYMYEMDDIEH--PEDG--IYIRQVTDAETKPKS 328
>UNIPROTKB|J3QT28 [details] [associations]
symbol:BUB3 "Mitotic checkpoint protein BUB3" species:9606
"Homo sapiens" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0051983 "regulation of chromosome segregation"
evidence=IEA] [GO:0071173 "spindle assembly checkpoint"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC012391 HGNC:HGNC:1151 ChiTaRS:Bub3
ProteinModelPortal:J3QT28 Ensembl:ENST00000407911 Uniprot:J3QT28
Length = 278
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 108/278 (38%), Positives = 155/278 (55%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ PPED IS + FSP+T FL+ SWD +VR ++V N + G VL
Sbjct: 6 EFKLNQPPEDGISSVKFSPNT--SQFLLVSSWDTSVRLYDVPANSMRLKYQHTGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKL 296
+ IY VN I FH +H T AT GS+G + WD + +L
Sbjct: 232 EQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRL 269
>UNIPROTKB|E1C9E5 [details] [associations]
symbol:BUB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008608 "attachment of spindle
microtubules to kinetochore" evidence=IEA] [GO:0051983 "regulation
of chromosome segregation" evidence=IEA] [GO:0071173 "spindle
assembly checkpoint" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0000070 GO:GO:0008608
GO:GO:0051983 GO:GO:0071173 GeneTree:ENSGT00530000063440
EMBL:AADN02078913 EMBL:AADN02078914 EMBL:AADN02078915
EMBL:AADN02078916 EMBL:AADN02078917 IPI:IPI00682559
Ensembl:ENSGALT00000015757 ArrayExpress:E1C9E5 Uniprot:E1C9E5
Length = 258
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 104/265 (39%), Positives = 148/265 (55%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ P+D IS + FSP+T FL+ SWD VR ++V N + G VL
Sbjct: 6 EFKLNQTPDDGISSVKFSPNT--SQFLLVSSWDTTVRLYDVPANSMRLKYQHSGA---VL 60
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
D A+ D T + G D+ +K DL ++Q V HDAP++ + P ++TGSWD
Sbjct: 61 DCAFYDP-THAWSGGLDQQLKMHDLNTDQENLVGGHDAPIRCVEY--CPEVNVMVTGSWD 117
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
+T+K WD RTP T + PE+ Y V +VGTAGR ++++ L ++ ES
Sbjct: 118 QTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESS 177
Query: 201 LKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGV 258
LKYQ RCI F +K+ GY L S+EGRVA++Y++P+ K + FKCHR +
Sbjct: 178 LKYQTRCIRAFPNKQ----GYVLSSIEGRVAVEYLDPSPEIQKKKYAFKCHRLK--ENNI 231
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEG 283
+ IY VN I FH VH T AT GS+G
Sbjct: 232 EQIYPVNAISFHNVHNTFATGGSDG 256
>DICTYBASE|DDB_G0292134 [details] [associations]
symbol:bub3 "putative mitotic checkpoint protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0000776 "kinetochore"
evidence=ISS] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0292134 GO:GO:0005634
GenomeReviews:CM000155_GR GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000187 eggNOG:COG2319 KO:K02180
OMA:NAISFHS RefSeq:XP_629851.1 HSSP:P26449
ProteinModelPortal:Q54DM1 STRING:Q54DM1 EnsemblProtists:DDB0233126
GeneID:8628531 KEGG:ddi:DDB_G0292134 ProtClustDB:CLSZ2429485
Uniprot:Q54DM1
Length = 331
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 108/322 (33%), Positives = 167/322 (51%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLD 81
+E+ PP D IS + F P+++ L+ SWD+ VRC++ + N + K PV+D
Sbjct: 10 YELRLPPSDGISSVNFCPNSVN---LLVTSWDSTVRCYDTQNN---VQKWQYNHKGPVMD 63
Query: 82 VAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDK 141
+ + KVF +VK +D + +V H+ V++ + + L TG WD+
Sbjct: 64 GCF-PEKNKVFSGDVFGSVKHYDPVAGVEKEVGSHEDGVRSV--VYNSDTQQLFTGGWDQ 120
Query: 142 TLKFWDLRTPQ-PIMTINLPERCYCADVDYPLA---VVGTAGRGIVLYQLEGKPQEFKKT 197
LK WD+R+ + I +L + + DV P++ V+GTA + + +Y +K
Sbjct: 121 QLKLWDIRSDKMEISNHDLQSKIFTMDVS-PISNMLVIGTADKYVTIYDTRQMETHLQKR 179
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNP--ANPKDNFTFKCHRSNGGA 255
ES +KYQ RCI F D K GY L SVEGR+A++Y +P A + FKCHR
Sbjct: 180 ESSIKYQTRCIRTFTDGK----GYALASVEGRIAMEYFDPSPAVQSKKYAFKCHRLT--E 233
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
GV +Y VN I F+P +GT AT G + FWD R +L + SIS+ + N +G
Sbjct: 234 SGVDVVYPVNCIAFNPHYGTFATGGCDKNVFFWDGANRKRLHALKTYPTSISSMSFNTDG 293
Query: 316 QIFAYAVSYDWSKGHEHNNPNK 337
I A A SY + +G + + P++
Sbjct: 294 NILAVASSYTFEEGEKDHPPDQ 315
>TAIR|locus:2091211 [details] [associations]
symbol:BUB3.1 "AT3G19590" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000776
GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000417 GO:GO:0009524
HOGENOM:HOG000208822 KO:K02180 OMA:NAISFHS GO:GO:0080008
ProtClustDB:CLSN2682694 UniGene:At.8134 EMBL:AY087404 EMBL:BT004273
EMBL:BT006152 IPI:IPI00532277 PIR:T52386 RefSeq:NP_566644.1
ProteinModelPortal:Q9LJN8 SMR:Q9LJN8 IntAct:Q9LJN8 STRING:Q9LJN8
PaxDb:Q9LJN8 PRIDE:Q9LJN8 EnsemblPlants:AT3G19590.1 GeneID:821496
KEGG:ath:AT3G19590 TAIR:At3g19590 InParanoid:Q9LJN8
PhylomeDB:Q9LJN8 ArrayExpress:Q9LJN8 Genevestigator:Q9LJN8
Uniprot:Q9LJN8
Length = 340
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 115/339 (33%), Positives = 174/339 (51%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
E+ +PP D IS + FS ++ + L++ SWD VR ++V N + + G + VLD
Sbjct: 11 ELSNPPSDGISNLRFSNNS--DHLLVS-SWDKRVRLYDVSTNSLK-GEFLHGGA--VLDC 64
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKT 142
+ DD + F G D V+ + + HD V+ + A ++TGSWDKT
Sbjct: 65 CFHDDFSG-FSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYSYAAGQ--VITGSWDKT 121
Query: 143 LKFWDLRT---PQ--PIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
+K WD R P+ + T PER Y + VV TAGR + +Y L Q ++
Sbjct: 122 VKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQPEQRR 181
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQY--VNPANPKDNFTFKCHRSNGGA 255
ES LKYQ RC+ + + GY L SVEGRVA+++ ++ A + FKCHR +
Sbjct: 182 ESSLKYQTRCVRCYPNG----TGYALSSVEGRVAMEFFDLSEAAQAKKYAFKCHRKS--E 235
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
G +Y VN I FHP++GT AT G +G + WD + + +L SIS + + +G
Sbjct: 236 AGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDG 295
Query: 316 QIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPR 353
Q+ A A SY + +G + P AIF+R E ++KP+
Sbjct: 296 QLLAVASSYTFEEGEKSQEPE---AIFVRSVNEIEVKPK 331
>UNIPROTKB|B0QZ36 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9606 "Homo
sapiens" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0071407 HOGENOM:HOG000208823 EMBL:AL109955 EMBL:AL135939
UniGene:Hs.371698 HGNC:HGNC:9828 IPI:IPI00797295 SMR:B0QZ36
STRING:B0QZ36 Ensembl:ENST00000411894 Ensembl:ENST00000429339
HOVERGEN:HBG097684 Uniprot:B0QZ36
Length = 137
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 74/108 (68%), Positives = 88/108 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q + PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK 127
LDV W DDG+KVF A CDKT K WDL+SNQ++Q+AQHDAPVKT HWIK
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIK 137
>UNIPROTKB|B4DDM6 [details] [associations]
symbol:BUB3 "cDNA FLJ57899, highly similar to Mitotic
checkpoint protein BUB3" species:9606 "Homo sapiens" [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0051983
"regulation of chromosome segregation" evidence=IEA] [GO:0071173
"spindle assembly checkpoint" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000070 EMBL:AC012391 GO:GO:0051983
GO:GO:0071173 HOVERGEN:HBG002942 UniGene:Hs.418533 HGNC:HGNC:1151
ChiTaRS:Bub3 EMBL:AK293255 IPI:IPI01010654 SMR:B4DDM6 STRING:B4DDM6
Ensembl:ENST00000538238 Uniprot:B4DDM6
Length = 248
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 96/255 (37%), Positives = 140/255 (54%)
Query: 104 DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERC 163
DL ++Q V HDAP++ + P ++TGSWD+T+K WD RTP T + PE+
Sbjct: 3 DLNTDQENLVGTHDAPIRCVEY--CPEVNVMVTGSWDQTVKLWDPRTPCNAGTFSQPEKV 60
Query: 164 YCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGL 223
Y V +VGTAGR ++++ L ++ ES LKYQ RCI F +K+ GY L
Sbjct: 61 YTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQ----GYVL 116
Query: 224 GSVEGRVAIQYVNPANP--KDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGS 281
S+EGRVA++Y++P+ K + FKCHR ++ IY VN I FH +H T AT GS
Sbjct: 117 SSIEGRVAVEYLDPSPEVQKKKYAFKCHRLK--ENNIEQIYPVNAISFHNIHNTFATGGS 174
Query: 282 EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGH-EHNNPNKGNA 340
+G + WD + +L SI++ A +++G A A SY + EH P G
Sbjct: 175 DGFVNIWDPFNKKRLCQFHRYPTSIASLAFSNDGTTLAIASSYMYEMDDTEH--PEDG-- 230
Query: 341 IFLRPCFE-DMKPRS 354
IF+R + + KP+S
Sbjct: 231 IFIRQVTDAETKPKS 245
>TAIR|locus:2007248 [details] [associations]
symbol:BUB3.2 "AT1G49910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000208822 KO:K02180
EMBL:AC074110 IPI:IPI00527088 RefSeq:NP_175413.1 UniGene:At.38135
ProteinModelPortal:Q9C701 SMR:Q9C701 STRING:Q9C701
EnsemblPlants:AT1G49910.1 GeneID:841414 KEGG:ath:AT1G49910
TAIR:At1g49910 InParanoid:Q9C701 OMA:SEDGRDI PhylomeDB:Q9C701
ProtClustDB:CLSN2682694 ArrayExpress:Q9C701 Genevestigator:Q9C701
Uniprot:Q9C701
Length = 339
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 110/339 (32%), Positives = 176/339 (51%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
E+ +PP D IS + FS ++ + L++ SWD +VR ++ NG + + VLD
Sbjct: 10 ELSNPPSDGISNLRFSNNS--DHLLVS-SWDKSVRLYDA--NGDLMRGEFKH-GGAVLDC 63
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKT 142
+ DD + F D V+ D + + + H+ PV+ + A ++TGSWDKT
Sbjct: 64 CFHDDSSG-FSVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQ--VITGSWDKT 120
Query: 143 LKFWDLR----TPQP-IMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
+K WD R T + I T PER + VV TAGR + +Y L Q ++
Sbjct: 121 IKCWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRR 180
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQY--VNPANPKDNFTFKCHRSNGGA 255
ES LKYQ RC+ + + GY L SVEGRV++++ ++ A + FKCHR +
Sbjct: 181 ESSLKYQTRCVRCYPNG----TGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKS--E 234
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
G +Y VN I FHP++GT A+ G +G + WD + + +L SI+ + + +G
Sbjct: 235 DGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDG 294
Query: 316 QIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFE-DMKPR 353
+ A A SY + +G + P++ +AIF+R E ++KP+
Sbjct: 295 GLLAVASSYTFEEG---DKPHEPDAIFVRSVNEIEVKPK 330
>POMBASE|SPAC23H3.08c [details] [associations]
symbol:bub3 "mitotic spindle checkpoint protein Bub3"
species:4896 "Schizosaccharomyces pombe" [GO:0000778 "condensed
nuclear chromosome kinetochore" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IMP] [GO:0033597 "mitotic checkpoint complex"
evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC23H3.08c EMBL:CU329670 GO:GO:0034613
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR GO:GO:0007094
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000778 HOGENOM:HOG000208822 KO:K02180
OMA:NAISFHS PIR:T38301 RefSeq:NP_593798.1 ProteinModelPortal:O42860
IntAct:O42860 STRING:O42860 EnsemblFungi:SPAC23H3.08c.1
GeneID:2541856 KEGG:spo:SPAC23H3.08c eggNOG:NOG330182
OrthoDB:EOG4XKZH8 NextBio:20802944 GO:GO:0033597 Uniprot:O42860
Length = 320
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 88/295 (29%), Positives = 154/295 (52%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D IS + FSPS + LIAG WD ++ +++ N + + K +S P+L + + D+
Sbjct: 12 KDGISSVIFSPSVKNE--LIAGCWDGSLLHYQISENPELLGK--YDLSSPILSLEYTDEK 67
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
T + + D TV DL + + H V ++ N C ++GSWDK+ + WD+
Sbjct: 68 TAL-VGNLDGTVTTLDLNTRNHEFLGNHGKGVSCISKLRLEN--CFISGSWDKSFRVWDV 124
Query: 149 RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCI 208
R QP+ ++ ++ + + + V+G + R ++Y + F++ S KY R +
Sbjct: 125 RVKQPVEGQDIGKKIFASSSRDNILVLGCSERENLVYDIRNLKLPFQRRPSSFKYMTRSV 184
Query: 209 AIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKD--NFTFKCHRSNGGAGGVQDIYAVNG 266
++ + G+ S+EGR +++Y+NP+ NFTFKCHR + +Y VN
Sbjct: 185 CCNQNFE----GFVSSSIEGRTSVEYINPSQEAQSKNFTFKCHRQIQKDYDI--VYPVND 238
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
+ FHP+H TLAT G +G +FWD R +L+ ++IS+ + N +G + A A
Sbjct: 239 LKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNPSKINISSISFNVDGSMLAIA 293
>WB|WBGene00013209 [details] [associations]
symbol:bub-3 species:6239 "Caenorhabditis elegans"
[GO:0007067 "mitosis" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI] [GO:0007094 "mitotic
spindle assembly checkpoint" evidence=IMP] [GO:0033316 "meiotic
spindle assembly checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0007067
GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063440 HOGENOM:HOG000208822 KO:K02180
OMA:NAISFHS EMBL:AL032648 PIR:T27185 RefSeq:NP_496879.1
ProteinModelPortal:Q9XWH0 SMR:Q9XWH0 DIP:DIP-26143N IntAct:Q9XWH0
MINT:MINT-1052446 STRING:Q9XWH0 PaxDb:Q9XWH0
EnsemblMetazoa:Y54G9A.6 GeneID:175018 KEGG:cel:CELE_Y54G9A.6
UCSC:Y54G9A.6 CTD:175018 WormBase:Y54G9A.6 InParanoid:Q9XWH0
NextBio:886426 GO:GO:0033316 Uniprot:Q9XWH0
Length = 343
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 100/331 (30%), Positives = 156/331 (47%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F V PP IS + F + L A WD R +EV G K + +P+L
Sbjct: 15 EFRVPFPPFVQISKVQFQREAGSR-LLAASGWDGTCRVYEVGKLGDISEKLVFTHGKPLL 73
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
+ KV G D VK D+ + Q+ H V+ + P + +++G WD
Sbjct: 74 TCTFAGYN-KVAFGGVDHNVKLADIETGNGTQLGSHALAVRCMEF--NPMSSLIVSGGWD 130
Query: 141 KTLKFWDLRT--PQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTE 198
++K WD R+ I ++N+ Y DV +VGT R I +Y + + +
Sbjct: 131 SSVKLWDARSYGNGAIESVNVSSSVYAMDVLKHTILVGTKDRKIFMYDSRKLREPLQVRD 190
Query: 199 SPLKYQNRCIAIFRDKKKQPAG--YGLGSVEGRVAIQYVNPANP---KDNFTFKCHRSNG 253
SPLKYQ R + F P G + + S+EGRVA++YV+ + K + FKCHR
Sbjct: 191 SPLKYQTRAVQFF------PTGEAFVVSSIEGRVAVEYVDQSGEEMMKRKYAFKCHREKD 244
Query: 254 GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNH 313
G + I+ V+ + FHP +GT AT G++G + WD R ++ + SIS+ + N
Sbjct: 245 -TDGTELIHPVHTVAFHPKYGTFATGGADGIVNIWDPFNRKRIIQLHKFETSISSLSFNE 303
Query: 314 NGQIFAYAVSYDWSKGHEHNNPNKGNAIFLR 344
+G A A SY + K + + P N+I +R
Sbjct: 304 DGSQLAIATSYQYEKEIDPS-PLPNNSITIR 333
>UNIPROTKB|Q9XWH0 [details] [associations]
symbol:bub-3 "Protein BUB-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0007067 GO:GO:0007094 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063440
HOGENOM:HOG000208822 KO:K02180 OMA:NAISFHS EMBL:AL032648 PIR:T27185
RefSeq:NP_496879.1 ProteinModelPortal:Q9XWH0 SMR:Q9XWH0
DIP:DIP-26143N IntAct:Q9XWH0 MINT:MINT-1052446 STRING:Q9XWH0
PaxDb:Q9XWH0 EnsemblMetazoa:Y54G9A.6 GeneID:175018
KEGG:cel:CELE_Y54G9A.6 UCSC:Y54G9A.6 CTD:175018 WormBase:Y54G9A.6
InParanoid:Q9XWH0 NextBio:886426 GO:GO:0033316 Uniprot:Q9XWH0
Length = 343
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 100/331 (30%), Positives = 156/331 (47%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F V PP IS + F + L A WD R +EV G K + +P+L
Sbjct: 15 EFRVPFPPFVQISKVQFQREAGSR-LLAASGWDGTCRVYEVGKLGDISEKLVFTHGKPLL 73
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWD 140
+ KV G D VK D+ + Q+ H V+ + P + +++G WD
Sbjct: 74 TCTFAGYN-KVAFGGVDHNVKLADIETGNGTQLGSHALAVRCMEF--NPMSSLIVSGGWD 130
Query: 141 KTLKFWDLRT--PQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTE 198
++K WD R+ I ++N+ Y DV +VGT R I +Y + + +
Sbjct: 131 SSVKLWDARSYGNGAIESVNVSSSVYAMDVLKHTILVGTKDRKIFMYDSRKLREPLQVRD 190
Query: 199 SPLKYQNRCIAIFRDKKKQPAG--YGLGSVEGRVAIQYVNPANP---KDNFTFKCHRSNG 253
SPLKYQ R + F P G + + S+EGRVA++YV+ + K + FKCHR
Sbjct: 191 SPLKYQTRAVQFF------PTGEAFVVSSIEGRVAVEYVDQSGEEMMKRKYAFKCHREKD 244
Query: 254 GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNH 313
G + I+ V+ + FHP +GT AT G++G + WD R ++ + SIS+ + N
Sbjct: 245 -TDGTELIHPVHTVAFHPKYGTFATGGADGIVNIWDPFNRKRIIQLHKFETSISSLSFNE 303
Query: 314 NGQIFAYAVSYDWSKGHEHNNPNKGNAIFLR 344
+G A A SY + K + + P N+I +R
Sbjct: 304 DGSQLAIATSYQYEKEIDPS-PLPNNSITIR 333
>FB|FBgn0025457 [details] [associations]
symbol:Bub3 "Bub3" species:7227 "Drosophila melanogaster"
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0007093 "mitotic cell cycle checkpoint"
evidence=NAS] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005875 GO:GO:0005654 GO:GO:0000776
GO:GO:0007052 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AF075594 EMBL:AF088846
IntAct:O76523 STRING:O76523 FlyBase:FBgn0025457 InParanoid:O76523
OrthoDB:EOG4M9072 Uniprot:O76523
Length = 327
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 95/309 (30%), Positives = 154/309 (49%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
+F++ +PPED IS + F P + QY + A SWD +R ++V P + K +Q P+L
Sbjct: 5 EFKLNNPPEDLISAVKFGPKS-NQY-MAASSWDGTLRFYDV-PANQLRQKFVQ--DAPLL 59
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTC-LMTGSW 139
D A++D V D ++ +D+ + + H+ P++ C ++ Y ++TGSW
Sbjct: 60 DCAFMDI-VHVVSGSLDNQLRLFDVNTQAESIIGAHEEPIR-C--VEHAEYVNGILTGSW 115
Query: 140 DKTLKFWDLRTPQPIMTINLPE-RCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTE 198
D T+K WD+R + + T + Y V VV T+ R ++++ L K +
Sbjct: 116 DNTVKLWDMREKRCVGTFEQNNGKVYSMSVIDEKIVVATSDRKVLIWDLR-KDGQLHHEA 174
Query: 199 SPLKYQNRCIA-IFRDKKKQPAGYGLGSVEGRVAIQYVN--PANPKDNFTFKCHRSNGGA 255
L R A ++ KK + S+EGRVA++Y++ P + F FKCHR+
Sbjct: 175 GVLAQVPRPAAFVYSPTKKATV---MSSIEGRVAVEYLDHDPEVQRRKFAFKCHRNR--E 229
Query: 256 GGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
++ IY VN + FH V+ T AT GS+G + WD + +L D SIST + +G
Sbjct: 230 QNIEQIYPVNALSFHNVYQTFATGGSDGIVNIWDGFNKKRLCQFHEYDTSISTLNFSSDG 289
Query: 316 QIFAYAVSY 324
A SY
Sbjct: 290 SALAIGCSY 298
>ASPGD|ASPL0000047688 [details] [associations]
symbol:sldB species:162425 "Emericella nidulans"
[GO:0007094 "mitotic spindle assembly checkpoint" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0034613 "cellular
protein localization" evidence=IEA] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
EMBL:BN001307 HOGENOM:HOG000208822 OMA:NAISFHS
ProteinModelPortal:C8VP05 EnsemblFungi:CADANIAT00009151
Uniprot:C8VP05
Length = 357
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 86/276 (31%), Positives = 138/276 (50%)
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
PVLD + ++F AG D VK D+AS ++ HDA V++ + K Y+ +++
Sbjct: 65 PVLDACFGATEDEIFTAGLDWDVKRIDIASASQTVLSSHDAGVRSVVYSK--EYSMVISA 122
Query: 138 SWDKTLKFWDL---RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQL------- 187
SWD TL L R+ +I LP + + + VVG A R + +Y L
Sbjct: 123 SWDNTLHVHRLAGDRSVTNTASIPLPSKPFSMSLTATKLVVGMASRALHIYDLKSLSLLT 182
Query: 188 ---EG--KP-----QEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNP 237
EG P + +++ ES LK+ RC+A D AGY S+EGRVA+++ +P
Sbjct: 183 GQSEGGVAPAKVEVEPWQRRESSLKFMTRCVACMPDD----AGYASSSIEGRVAVEWFDP 238
Query: 238 ANPKD--NFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTK 295
+ + FKCHR + V +Y VN + FHP+HGT A+ G +G + WD A+ +
Sbjct: 239 SAESQARKYAFKCHRQT--SDDVDVVYPVNSLAFHPIHGTFASGGGDGVVALWDGIAKRR 296
Query: 296 LKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHE 331
++ + S++ A + NG+ A A+S + G +
Sbjct: 297 IRQYQKYPSSVAAVAFSSNGKYLAIAISPGYEDGKD 332
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 56/174 (32%), Positives = 89/174 (51%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEV-EPNGKTIP-KSMQGMSE-- 77
F + SPP D+IS + FSP+ F+++ SWD NV +++ + NG K +Q
Sbjct: 6 FTITSPPTDAISALKFSPAPDSTRFVVS-SWDKNVYVYDLRDENGAAGEGKLLQKFEHRA 64
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
PVLD + ++F AG D VK D+AS ++ HDA V++ + K Y+ +++
Sbjct: 65 PVLDACFGATEDEIFTAGLDWDVKRIDIASASQTVLSSHDAGVRSVVYSK--EYSMVISA 122
Query: 138 SWDKTLKFWDL---RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLE 188
SWD TL L R+ +I LP + + + VVG A R + +Y L+
Sbjct: 123 SWDNTLHVHRLAGDRSVTNTASIPLPSKPFSMSLTATKLVVGMASRALHIYDLK 176
>UNIPROTKB|G4N5H8 [details] [associations]
symbol:MGG_06111 "Mitotic checkpoint protein BUB3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001233 KO:K02180
RefSeq:XP_003711978.1 ProteinModelPortal:G4N5H8
EnsemblFungi:MGG_06111T0 GeneID:2684287 KEGG:mgr:MGG_06111
Uniprot:G4N5H8
Length = 352
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 100/358 (27%), Positives = 165/358 (46%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGK--TIPKSMQ-GMSEP 78
FE P D + M F+P + L+ S D N+ +E++ G+ + P Q + P
Sbjct: 2 FEAEPAPGDCPTAMKFAPGSRK---LLVSSMDGNIYMYELQGEGEDASAPLVRQISIGCP 58
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGS 138
VLDV + D + F G D +K DL S V +H+ P + C I +P Y+ L +GS
Sbjct: 59 VLDVTFGSDDKEGFCTGADSAIKRVDLESGDVTVVGKHEKPAR-CI-IYSPEYSILASGS 116
Query: 139 WDKTLKFWDLR--TPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQL--------- 187
WD TL+ W+ + + PI+ + LP + + VVG R + ++ L
Sbjct: 117 WDCTLQIWNAKDLSKDPII-VQLPVKVHAMAASKTKLVVGMHNRMVQIFDLPAIAQLLES 175
Query: 188 -----EGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKD 242
E + +++ ES LK+ R IA + AGY S EGRVA+++ +
Sbjct: 176 GASGSESGLKPWQQRESSLKFMTRAIACMPND----AGYATSSTEGRVAVEFFEDSAEVQ 231
Query: 243 --NFTFKCHRSNGGAG-GVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK-- 297
+ FKCHR + IY V+ + FHP + T + G +G + WD +A+ ++K
Sbjct: 232 ARKYAFKCHRGPDPKDPDTELIYPVDSLAFHPEYLTFVSGGGDGQVALWDSEAKRRMKIY 291
Query: 298 PSEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNA-IFLRPCFE-DMKPR 353
P ++ T A + +G+ A + E N KG + + +R E ++KP+
Sbjct: 292 PMNG-GLAARTLAFSADGRFLAIGTCPGFEDTME-NYSGKGQSHVLIRELSEKEVKPK 347
>TAIR|locus:2036159 [details] [associations]
symbol:AT1G15850 "AT1G15850" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC034256
KO:K14298 IPI:IPI00536865 PIR:H86292 RefSeq:NP_173037.1
UniGene:At.51625 ProteinModelPortal:Q9LMQ0 SMR:Q9LMQ0 STRING:Q9LMQ0
PRIDE:Q9LMQ0 EnsemblPlants:AT1G15850.1 GeneID:838155
KEGG:ath:AT1G15850 TAIR:At1g15850 InParanoid:Q9LMQ0 OMA:QSTTETM
PhylomeDB:Q9LMQ0 Genevestigator:Q9LMQ0 Uniprot:Q9LMQ0
Length = 140
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 61/127 (48%), Positives = 71/127 (55%)
Query: 22 FEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTI---PKSMQGMSEP 78
+E+ P DSIS ++FSP L+A SWD VRCWE+ + +I PK +P
Sbjct: 19 YEITPPATDSISSLSFSPKA---DILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQP 75
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASN-QSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
VL AW DDGT VF GCDK K W L S Q VA HDAP WI P L+TG
Sbjct: 76 VLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI--PGMNLLVTG 133
Query: 138 SWDKTLK 144
SWDKTLK
Sbjct: 134 SWDKTLK 140
>TAIR|locus:2026446 [details] [associations]
symbol:AT1G69400 "AT1G69400" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 KO:K02180 GO:GO:0080008
IPI:IPI00525022 RefSeq:NP_564965.1 UniGene:At.35426
ProteinModelPortal:F4I241 SMR:F4I241 EnsemblPlants:AT1G69400.1
GeneID:843272 KEGG:ath:AT1G69400 OMA:YSFRCHP Uniprot:F4I241
Length = 314
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 86/314 (27%), Positives = 150/314 (47%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
E +P ED++S + FSP + L+A SWD+ +R ++VE + ++ + Q +LD
Sbjct: 7 EFENPIEDAVSRLRFSPQS--NNLLVA-SWDSYLRLYDVESSSLSLELNSQAA---LLDC 60
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKT 142
+ ++ T F +G D ++ +DL + + +HD + T + TG +D+
Sbjct: 61 CFENESTS-FTSGSDGFIRRYDLNAGTVDTIGRHD-DISTSIVYSYEKGEVISTG-FDEK 117
Query: 143 LKFWDLRTPQPIM-TINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPL 201
+KFWD R + ++ + + C V VV + +Y L + F+ S +
Sbjct: 118 IKFWDTRQRESLVFSTDAGGAVGCVTVSGNNLVV-CVDASMHIYDLRNLDEAFQSYASQV 176
Query: 202 KYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKD-NFTFKCH-RS-NGGAGGV 258
+ RCI + GY +GSV+GRVA+ + N + + ++F+CH +S NG GV
Sbjct: 177 EVPIRCITSVPYSR----GYAVGSVDGRVAVDFPNTSCSSEIKYSFRCHPKSRNGRLDGV 232
Query: 259 QDIYAVNGIVFHPV-HGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
+N I F P GT T +EG W+ +R +L SI++ A +H G++
Sbjct: 233 ----CINAIEFSPCGSGTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGEL 288
Query: 318 FAYAVSYDWSKGHE 331
A A S+ + E
Sbjct: 289 LAIASSHTYQDAKE 302
>UNIPROTKB|B0QZ37 [details] [associations]
symbol:RAE1 "mRNA export factor" species:9606 "Homo
sapiens" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400
SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0071407 EMBL:AL109955
EMBL:AL135939 UniGene:Hs.371698 HGNC:HGNC:9828 IPI:IPI00794643
SMR:B0QZ37 STRING:B0QZ37 Ensembl:ENST00000452119 Uniprot:B0QZ37
Length = 87
Score = 204 (76.9 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQ 73
KD EV S P+DSI C++FSP TLP FLIAGSW N+VRCWEV+ +G+TIPK+ Q
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ 83
>SGD|S000005552 [details] [associations]
symbol:BUB3 "Kinetochore checkpoint WD40 repeat protein"
species:4932 "Saccharomyces cerevisiae" [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0033597 "mitotic checkpoint complex" evidence=IDA;IPI]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0044774 "mitotic DNA
integrity checkpoint" evidence=IGI] [GO:0007094 "mitotic spindle
assembly checkpoint" evidence=TAS] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000005552 EMBL:X87331
EMBL:BK006948 GO:GO:0007094 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0000778 GO:GO:0043130 PDB:2I3S PDBsum:2I3S
KO:K02180 eggNOG:NOG330182 OrthoDB:EOG4XKZH8 GO:GO:0033597
EMBL:M64707 EMBL:Z74934 PIR:B39654 RefSeq:NP_014669.1 PDB:1U4C
PDB:1YFQ PDB:2I3T PDBsum:1U4C PDBsum:1YFQ PDBsum:2I3T
ProteinModelPortal:P26449 SMR:P26449 DIP:DIP-1219N IntAct:P26449
MINT:MINT-396573 STRING:P26449 PaxDb:P26449 PeptideAtlas:P26449
EnsemblFungi:YOR026W GeneID:854191 KEGG:sce:YOR026W CYGD:YOR026w
HOGENOM:HOG000247885 OMA:RFAFRCH EvolutionaryTrace:P26449
NextBio:976011 Genevestigator:P26449 GermOnline:YOR026W
GO:GO:0070683 Uniprot:P26449
Length = 341
Score = 210 (79.0 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 83/325 (25%), Positives = 143/325 (44%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGM--SEPVL 80
++ P+D IS + PS + L+ SWD ++ ++ + K + +Q + P+L
Sbjct: 5 QIEQAPKDYISDIKIIPS---KSLLLITSWDGSLTVYKFDIQAKNVDL-LQSLRYKHPLL 60
Query: 81 DVAWIDD-GTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGS 138
+ID+ ++++ + DL + S Q + ++A + C K + L+ S
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDK-LIAAS 119
Query: 139 WDKTLKFWDLRT-PQPIMTI-NL-------PERCYCADVDYPLAVVGTAGRGIVLYQLE- 188
WD ++ D R ++ + NL + + D + +VG + ++L
Sbjct: 120 WDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL 179
Query: 189 GKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPA----NPKDNF 244
+ ES LKYQ R +A+ K+ GY S++GRVA+++ + N F
Sbjct: 180 CEDDNGTIEESGLKYQIRDVALL---PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236
Query: 245 TFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP-SEAMD 303
F+CHR N Y VN I F P H L T GS+G S W+ R K+K ++ +
Sbjct: 237 AFRCHRLN--LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE 294
Query: 304 MSISTCALNHNGQIFAYAVSYDWSK 328
S+ A + N I A S D K
Sbjct: 295 DSVVKIACSDN--ILCLATSDDTFK 317
>CGD|CAL0003474 [details] [associations]
symbol:BUB3 species:5476 "Candida albicans" [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0033597 "mitotic checkpoint
complex" evidence=IEA] [GO:0000778 "condensed nuclear chromosome
kinetochore" evidence=IEA] [GO:0044774 "mitotic DNA integrity
checkpoint" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 SMART:SM00320
CGD:CAL0003474 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K02180 eggNOG:NOG330182 EMBL:AACQ01000171
EMBL:AACQ01000170 RefSeq:XP_712037.1 RefSeq:XP_712058.1
STRING:Q59QR8 GeneID:3646341 GeneID:3646362 KEGG:cal:CaO19.10178
KEGG:cal:CaO19.2655 Uniprot:Q59QR8
Length = 373
Score = 186 (70.5 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 65/253 (25%), Positives = 112/253 (44%)
Query: 126 IKAPNYTCLMTGSWDKTLKFWDLRTPQ------PIMTINLPERCYCADVDYPLAVVGTAG 179
I N + ++ S++ L+ D R Q T + + + D ++G
Sbjct: 127 ISGQNSSSIVASSFNGKLQLIDTRQSQRQQQKLSPQTFHNQRKIFTMDTSDQYLILGLQN 186
Query: 180 RGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPAN 239
I +Y + + + LKYQ + + F D + G+ L +++GRV+++Y NP +
Sbjct: 187 NIIEIYDFKNLHHPLETRQVGLKYQIKDLKTFPDNQ----GFALSTIDGRVSMEYFNP-D 241
Query: 240 PK----DNFTFKCHRS---NGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDA 292
P+ + FTFKCHR N + G +Y VN + F+ +GTL T GS+G WD
Sbjct: 242 PQFQLQNRFTFKCHRHPDPNPESAG-DLVYPVNSLDFNHKYGTLFTAGSDGYVCLWDCKK 300
Query: 293 RTKLK--P----SEAMDMSISTCALNHNGQIFAYAVSYDWSKGH----EHNNPNKGNAIF 342
R +++ P +E SI +N + A S D K E N + ++
Sbjct: 301 RKRMRQYPRFLSAENEPESIVKLKINRQDNLMVVATSDDNYKRRRRLSESENSKTPSRVY 360
Query: 343 LRPCFE-DMKPRS 354
++ E + KP+S
Sbjct: 361 VKQLAENECKPKS 373
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 147 (56.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 39/152 (25%), Positives = 76/152 (50%)
Query: 32 ISCMAFSP-STLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
I C++F+P STL + GS D + W+++ NG+ + +++G S ++ +++ G +
Sbjct: 180 IVCLSFNPQSTL----VATGSMDTTAKLWDIQ-NGEEV-YTLRGHSAEIISLSFNTSGDR 233
Query: 91 VFMAGCDKTVKCWDLASNQSMQVA-QHDAPVKTCHWIKAPNYTC--LMTGSWDKTLKFWD 147
+ D TV WD + + + + H A + + + N+ C ++TGS DKT K WD
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASF----NWDCSLILTGSMDKTCKLWD 289
Query: 148 LRTPQPIMTIN-LPERCYCADVDYPLAVVGTA 178
+ + T+ + + DY ++ TA
Sbjct: 290 ATNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Score = 119 (46.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 48 IAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDD-GTKVFMAGCDKTVKCWDLA 106
I GS+D + W+ +G+ + +++G V +A+ + G K+ DKT K W +
Sbjct: 108 ITGSYDRTCKLWDTA-SGEEL-NTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + H A + C P T + TGS D T K WD++ + + T+
Sbjct: 166 TGKCYHTFRGHTAEI-VCLSFN-PQSTLVATGSMDTTAKLWDIQNGEEVYTL 215
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 28/112 (25%), Positives = 55/112 (49%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
++ GS D + W+ NGK + ++ G + +LD + G + A D T + + A
Sbjct: 276 ILTGSMDKTCKLWDAT-NGKCVA-TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 107 SNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + ++ H+ + + N+ L+TGS DKT + WD +T Q + +
Sbjct: 334 TRKCIAKLEGHEGEISKISFNPQGNH--LLTGSSDKTARIWDAQTGQCLQVL 383
Score = 103 (41.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+ GS+D + W VE GK + +G + ++ +++ T V D T K WD+
Sbjct: 150 IATGSFDKTCKLWSVE-TGKCY-HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI 154
+ + + + H A + + + + + ++TGS+D T+ WD T + +
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDR--IITGSFDHTVVVWDADTGRKV 254
Score = 93 (37.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/73 (30%), Positives = 32/73 (43%)
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
P+ +VA G+ D+T K WD AS + + + V P + TG
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 138 SWDKTLKFWDLRT 150
S+DKT K W + T
Sbjct: 154 SFDKTCKLWSVET 166
Score = 67 (28.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
++ I F+P L T S+ T WD L+ E I +CA N+ G I
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 276 LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
+AT ++GT + R + E + IS + N G
Sbjct: 318 IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQG 357
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 165 (63.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 65/296 (21%), Positives = 127/296 (42%)
Query: 24 VVSPPEDSISCMAFSPS-TLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
++S ++ M F+P+ TL + +GS D + W V + K ++G +LD+
Sbjct: 48 LLSGHPSAVYTMKFNPAGTL----IASGSHDREIFLWRVHGDCKNF-MVLKGHKNAILDL 102
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTC-HWIKAPNYTCLMTGSWD 140
W DG+++ A DKTV+ WD+ + + ++ +A+H + V +C + P +++GS D
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP--PLIISGSDD 160
Query: 141 KTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESP 200
T K WD+R I T P++ V + A G+ + K + +K E+
Sbjct: 161 GTAKLWDMRQRGAIQTF--PDKYQITAVSFSDAADKIFTGGV---DNDVKVWDLRKGEAT 215
Query: 201 LKYQNRCIAIFRDKKKQPAGYGL-GSVEGRVAIQYVNPANPKDNFT--FKCHRSNGGAGG 257
+ + I Y L ++ ++ + + P P++ F+ H+ N
Sbjct: 216 MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 258 VQDIYAVNGIVFHPVHGTLATVGSEGTF-SFWDKDARTKLKPSEAMDMSISTCALN 312
++ ++ +G T T GS WD +R + S++ C +
Sbjct: 276 LKCSWSPDG--------TKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFH 323
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 158 (60.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 50/192 (26%), Positives = 83/192 (43%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K++ V+ + +AF PS ++F GS D ++ W+V + ++ G E V
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSN--EWFC-TGSADRTIKIWDVATG--VLKLTLTGHIEQV 221
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
+A + T +F AG DK VKCWDL N+ ++ C + P L+TG
Sbjct: 222 RGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH-PTLDVLLTGGR 280
Query: 140 DKTLKFWDLRTPQPIMTINLPERCYCADVDYPL---AVVGTAGRGIVLYQLEGKPQEFKK 196
D + WD+RT I ++ + C+ P V G+ I + L + K
Sbjct: 281 DSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR-----YGK 335
Query: 197 TESPLKYQNRCI 208
T S L + + +
Sbjct: 336 TMSTLTHHKKSV 347
Score = 51 (23.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/86 (26%), Positives = 32/86 (37%)
Query: 240 PKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPS 299
PK F CH + + AVN G + T G G+ FWD + + S
Sbjct: 373 PKGEF---CHNMLSQQKTIINAMAVNE------DGVMVTGGDNGSIWFWDWKSGHSFQQS 423
Query: 300 EAMDMSISTCALNHNGQIFAYAVSYD 325
E + + +L I YA YD
Sbjct: 424 ETI---VQPGSLESEAGI--YAACYD 444
Score = 40 (19.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 14/73 (19%), Positives = 25/73 (34%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V + HP A+ ++ T F I+ A+N +G +
Sbjct: 346 SVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGD 405
Query: 323 S-----YDWSKGH 330
+ +DW GH
Sbjct: 406 NGSIWFWDWKSGH 418
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 142 (55.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDKT 99
T + +++GSWD + W+ GK++ ++ +G + W F A D+T
Sbjct: 120 TRGEQLVVSGSWDQTAKLWDPAV-GKSL-RTFKGHEGVIYSTIWSPHIPGCFASASGDQT 177
Query: 100 VKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMTI 157
++ WD+ A + + H A + +C W K L+TG+ D +LK WDLR QP+ +
Sbjct: 178 LRIWDVKAPGVRLVIPAHQAEILSCDWCKYDE-NLLVTGAVDCSLKGWDLRNVRQPVFIL 236
Score = 112 (44.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DKTVKC 102
QY+ IAG + E G + +S ++ + DV W ++ V + D +++
Sbjct: 36 QYYGIAGC--GTLAVLEQNETGIVLLRSFD-WNDGLFDVTWSENNEHVLITSSGDGSLQI 92
Query: 103 WDLASNQS-MQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD+A + +QV +H + W + +++GSWD+T K WD
Sbjct: 93 WDIAKPKGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWD 139
Score = 60 (26.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 262 YAVNGIVFHPVHGTL-ATVGSEGTFSFWD 289
YAV + F P H TL A+ + T FWD
Sbjct: 241 YAVRRVKFSPFHATLLASCSYDFTVRFWD 269
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 145 (56.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 249
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 250 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTIDVLVTCS 307
Query: 139 WDKTLKFWDLRTPQPIMTIN------LPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T++ RC A+ P + G+ I L+ L GK
Sbjct: 308 RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAE---PQIITGSHDTTIRLWDLVAGK 363
Score = 103 (41.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 37/141 (26%), Positives = 60/141 (42%)
Query: 40 STLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKT 99
ST Y G D V+CW++E N K I + G V + + D T
Sbjct: 255 STRSPYLFSCGE-DKQVKCWDLEYN-KVI-RHYHGHLSAVYGLDLHPTIDVLVTCSRDST 311
Query: 100 VKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
+ WD+ + S+ ++ H V T A ++TGS D T++ WDL + +T+
Sbjct: 312 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ--IITGSHDTTIRLWDLVAGKTRVTLT 369
Query: 159 LPERCYCADVDYPLAVVGTAG 179
++ A V +PL +G
Sbjct: 370 NHKKSVRAVVLHPLHYTFASG 390
Score = 63 (27.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V +V HP+H T A+ GS W ++ + I+T A+N +G + + A
Sbjct: 374 SVRAVVLHPLHYTFAS-GSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGAD 432
Query: 323 S-----YDWSKGH 330
+ +DW G+
Sbjct: 433 NGTMHLWDWRTGY 445
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 151 (58.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 31/107 (28%), Positives = 60/107 (56%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ G+T + + G ++ VL VA+ D ++ A D+T+K W+
Sbjct: 77 FALSGSWDGELRLWDLA-TGETTRRFV-GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APN--YTCLMTGSWDKTLKFWDLR 149
+++ D + ++ +PN +++ SWDKT+K W+L+
Sbjct: 135 LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 38/154 (24%), Positives = 75/154 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC+ FSP+TL +++ SWD V+ W ++ N K + S+ G S + VA DG+
Sbjct: 152 VSCVRFSPNTLVPT-IVSASWDKTVKVWNLQ-NCK-LRNSLVGHSGYLNTVAVSPDGSLC 208
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
G D + WDLA + + + + + + + +PN L + + +++ WDL +
Sbjct: 209 ASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF--SPNRYWLCAAT-ENSIRIWDLESK 265
Query: 152 QPIMTINLPERCYCADVDYPLAVVGTAGRGIVLY 185
+ + + + ++ + VGT + V+Y
Sbjct: 266 SVVEDLKVDLK---SEAEKNEGGVGTGNQKKVIY 296
Score = 47 (21.6 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD KL EA + S C
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC 241
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 158 (60.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD++VR W++ G+TI +S G + V V++ D ++ A DKT+K W+
Sbjct: 86 FALSGSWDHSVRLWDLSL-GETI-RSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNT 143
Query: 106 ASNQSMQVA--QHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ + QH + + +PN +++ WDK +K W+L+
Sbjct: 144 LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
+N + P A+ G +G WD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWD 229
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 158 (60.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD++VR W++ G+TI +S G + V V++ D ++ A DKT+K W+
Sbjct: 86 FALSGSWDHSVRLWDLSL-GETI-RSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNT 143
Query: 106 ASNQSMQVA--QHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ + QH + + +PN +++ WDK +K W+L+
Sbjct: 144 LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLK 189
Score = 38 (18.4 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
+N + P A+ G +G WD
Sbjct: 204 LNTVTISPDGSLCASGGKDGVAKLWD 229
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 159 (61.0 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 36/112 (32%), Positives = 55/112 (49%)
Query: 48 IAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA-GCDKTVKCWDLA 106
I GSWD +++ W P K+ + + W +F + D+T+K WD
Sbjct: 121 ITGSWDQSIKIWN--PRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR 178
Query: 107 SNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
N+S+ + HD + TC W K N ++TGS DKT++ WD+R P TI
Sbjct: 179 DNRSLNTIKAHDHEILTCDWNKY-NDKEVVTGSVDKTIRIWDIRYPDRPTTI 229
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 136 (52.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 23 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNVKGESTVFRAHTATVRSVHFCSDG 77
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A DKTVK W + + ++QH V+ + +P+ +++ S DKT+K WD
Sbjct: 78 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 135
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ K+ + + E V ++D G
Sbjct: 110 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KSSRECVHSYCEHGGFVTYVDFHPSG 161
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG D TVK WD+ +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 162 TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNY--LITASSDSTLKILD 219
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 220 LMEGRLLYTLH 230
Score = 103 (41.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
Q F+ A D V+ W K + Q ++ V + DG + A DKTVK W
Sbjct: 78 QSFVTASD-DKTVKVWATHRQ-KFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 104 DLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D +S + + +H V + P+ TC+ D T+K WD+RT
Sbjct: 135 DKSSRECVHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDVRT 180
Score = 66 (28.3 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 18/57 (31%), Positives = 23/57 (40%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVNG+ FHP L T S+ T D L +T A + G+ FA
Sbjct: 193 AVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 249
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 146 (56.5 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P GK++ + +G + W F A D+
Sbjct: 122 TRGEQLVVSGSWDQTVKLWD--PTVGKSLC-TFRGHESIIYSTIWSPHIPGCFASASGDQ 178
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ A+ + + H A + +C W K N L+TG+ D +L+ WDLR QP+
Sbjct: 179 TLRIWDVKAAGVRIVIPAHQAEILSCDWCKY-NENLLVTGAVDCSLRGWDLRNVRQPVFE 237
Query: 157 I 157
+
Sbjct: 238 L 238
Score = 101 (40.6 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 76 SEPVLDVAWIDDGTKVFMAGC--DKTVKCWDLASNQS-MQV-AQHDAPVKTCHWIKAPNY 131
++ + DV W ++ V + C D +++ WD A +QV +H V + W +
Sbjct: 67 NDGLFDVTWSENNEHVLIT-CSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGE 125
Query: 132 TCLMTGSWDKTLKFWD 147
+++GSWD+T+K WD
Sbjct: 126 QLVVSGSWDQTVKLWD 141
Score = 52 (23.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 16/68 (23%), Positives = 26/68 (38%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAY 320
YA+ + F P H + LA+ + T FW+ L + TC L+ + Q
Sbjct: 243 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDSLLETVEHHTEF-TCGLDFSLQSPTQ 301
Query: 321 AVSYDWSK 328
W +
Sbjct: 302 VADCSWDE 309
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 143 (55.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
++ ++ SWD +R W++E T G + VL V+ D +V DKT+K W+
Sbjct: 76 HYALSASWDKTIRLWDLEKGECT--HQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWN 133
Query: 105 LASNQSMQVAQ--HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ N + H V + P+ ++ WDK +K WDL T
Sbjct: 134 IIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLET 181
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D +SC+ FSP+ F+ AG WD V+ W++E ++ S G + V V DG+
Sbjct: 149 DWVSCVRFSPNPDNLTFVSAG-WDKAVKVWDLETF--SLRTSHYGHTGYVSAVTISPDGS 205
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPN--YTCLMTGSWDKTLKFWD 147
G D T+ WDL N+S + +A + +PN + C TGS +++ +D
Sbjct: 206 LCASGGRDGTLMLWDL--NESTHLYSLEAKANINALVFSPNRYWLCAATGS---SIRIFD 260
Query: 148 LRTPQPI 154
L T + +
Sbjct: 261 LETQEKV 267
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 38 SPSTLPQY--FLIAGSWDNNVRCWEV---EPNGKTIPKSMQGMSEPVLDVAWIDDGTKVF 92
S ST P+ L++GS D ++ W + + N + + G S V D A D
Sbjct: 20 SLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYAL 79
Query: 93 MAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
A DKT++ WDL + + Q H + V + +P+ +++GS DKT+K W++
Sbjct: 80 SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSI--SPDNRQVVSGSRDKTIKIWNI 134
Score = 54 (24.1 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 18/57 (31%), Positives = 24/57 (42%)
Query: 245 TFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
TF S+ G G Y V+ + P A+ G +GT WD + T L EA
Sbjct: 181 TFSLRTSHYGHTG----Y-VSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEA 232
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 288 WDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWS 327
WDK +K + S+ T H G + A +S D S
Sbjct: 170 WDK----AVKVWDLETFSLRTSHYGHTGYVSAVTISPDGS 205
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 136 (52.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 61 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A DKTVK W + + ++QH V+ + +P+ +++ S DKT+K WD
Sbjct: 116 QSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 173
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 39/131 (29%), Positives = 63/131 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ K+ + + E V ++D G
Sbjct: 148 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KSSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG D TVK WD+ +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 200 TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNY--LITASSDSTLKILD 257
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 258 LMEGRLLYTLH 268
Score = 108 (43.1 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+++C+ FS +T L +GS D+ + W ++P + G + V V + G
Sbjct: 20 DAVTCVDFSINTKQ---LASGSMDSCLMVWHMKPQSRAY--RFTGHKDAVTCVNFSPSGH 74
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + +T S DKT+K W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS--DGQSFVTASDDKTVKVW 130
Score = 103 (41.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
Q F+ A D V+ W K + Q ++ V + DG + A DKTVK W
Sbjct: 116 QSFVTASD-DKTVKVWATHRQ-KFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 104 DLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D +S + + +H V + P+ TC+ D T+K WD+RT
Sbjct: 173 DKSSRECVHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDVRT 218
Score = 66 (28.3 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 18/57 (31%), Positives = 23/57 (40%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVNG+ FHP L T S+ T D L +T A + G+ FA
Sbjct: 231 AVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/101 (21%), Positives = 39/101 (38%)
Query: 225 SVEGRVAIQYVNPANPK--DNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSE 282
S +GR+ + + K D + +C S GG V + FHP +A G +
Sbjct: 154 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGF-----VTYVDFHPSGTCIAAAGMD 208
Query: 283 GTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
T WD L+ + +++ + + +G A S
Sbjct: 209 NTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 145 (56.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 248
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 249 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTIDVLVTCS 306
Query: 139 WDKTLKFWDLRTPQPIMTIN------LPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T++ RC A+ P + G+ I L+ L GK
Sbjct: 307 RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAE---PQIITGSHDTTIRLWDLVAGK 362
Score = 59 (25.8 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V +V HP H T A+ GS W + ++ + I+T +N +G + + A
Sbjct: 373 SVRAVVLHPRHYTFAS-GSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 431
Query: 323 S-----YDWSKGH 330
+ +DW G+
Sbjct: 432 NGTMHLWDWRTGY 444
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 145 (56.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 195 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 249
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 250 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTIDVLVTCS 307
Query: 139 WDKTLKFWDLRTPQPIMTIN------LPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T++ RC A+ P + G+ I L+ L GK
Sbjct: 308 RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAE---PQIITGSHDTTIRLWDLVAGK 363
Score = 59 (25.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V +V HP H T A+ GS W + ++ + I+T +N +G + + A
Sbjct: 374 SVRAVVLHPRHYTFAS-GSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 432
Query: 323 S-----YDWSKGH 330
+ +DW G+
Sbjct: 433 NGTMHLWDWRTGY 445
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 149 (57.5 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 30/107 (28%), Positives = 57/107 (53%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ A D+T+K W+
Sbjct: 77 FALSGSWDGELRLWDLATGEST--RRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT 134
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APN--YTCLMTGSWDKTLKFWDLR 149
+++ D + ++ +PN +++ SWDKT+K W+L+
Sbjct: 135 LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ 181
Score = 125 (49.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC+ FSP+TL +++ SWD V+ W ++ N K + ++ G S + VA DG+
Sbjct: 152 VSCVRFSPNTLVPT-IVSASWDKTVKVWNLQ-NCK-LRNTLAGHSGYLNTVAVSPDGSLC 208
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
G D + WDLA + + + + + + + +PN L + + +++ WDL +
Sbjct: 209 ASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF--SPNRYWLCAAT-ENSIRIWDLES 264
Score = 47 (21.6 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD KL EA + S C
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC 241
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 145 (56.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 196 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 250
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 251 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTIDVLVTCS 308
Query: 139 WDKTLKFWDLRTPQPIMTIN------LPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T++ RC A+ P + G+ I L+ L GK
Sbjct: 309 RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAE---PQIITGSHDTTIRLWDLVAGK 364
Score = 59 (25.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V +V HP H T A+ GS W + ++ + I+T +N +G + + A
Sbjct: 375 SVRAVVLHPRHYTFAS-GSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 433
Query: 323 S-----YDWSKGH 330
+ +DW G+
Sbjct: 434 NGTMHLWDWRTGY 446
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 146 (56.5 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 37/121 (30%), Positives = 61/121 (50%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P GK++ + +G + W F A D+
Sbjct: 122 TRGEQLVVSGSWDQTVKLWD--PTVGKSLC-TFRGHESVIYSTIWSPHIPGCFASASGDQ 178
Query: 99 TVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ S + V H A + +C W K N L+TG+ D +L+ WDLR QP+
Sbjct: 179 TLRIWDVKSTGVRIVVPAHQAEILSCDWCKY-NENLLVTGAVDCSLRGWDLRNVRQPVFE 237
Query: 157 I 157
+
Sbjct: 238 L 238
Score = 103 (41.3 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVK 101
Q++ IAG + + +G + +S ++ + DV W ++ + + C D +++
Sbjct: 38 QHYGIAGC--GTLLILDQNESGLRLFRSFD-WNDGLFDVTWSENNEHILVT-CSGDGSLQ 93
Query: 102 CWDLA-SNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD A + +QV +H V + W + +++GSWD+T+K WD
Sbjct: 94 LWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Score = 50 (22.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWD 289
YA+ + F P H + LA+ + T FW+
Sbjct: 243 YAIRRVKFSPFHASVLASCSYDFTVRFWN 271
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 137 (53.3 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 61 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A DKTVK W + + + QH V+ + +P+ +++ S DKT+K WD
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 173
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ KT + + E V ++D G
Sbjct: 148 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG D TVK WD +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 200 TCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNY--LITASSDSTLKILD 257
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 258 LMEGRLLYTLH 268
Score = 115 (45.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+++C+ FS +T L +GS D+ + W ++P + G + V V + G
Sbjct: 20 DAVTCVDFSLNTK---HLASGSMDSTLMIWHMKPQSRAY--RFTGHKDAVTCVNFSPSGH 74
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + L+T S DKT+K W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS--DGQLLVTASDDKTVKVW 130
Score = 101 (40.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+ S D V+ W + + Q ++ V + DG + A DKTVK WD
Sbjct: 118 LVTASDDKTVKVWSTHRQ-RFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 107 SNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
S + + +H V + P+ TC+ D T+K WD RT
Sbjct: 176 SRECVHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDTRT 218
Score = 60 (26.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVN + FHP L T S+ T D L +T A + G+ FA
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Score = 54 (24.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/101 (20%), Positives = 39/101 (38%)
Query: 225 SVEGRVAIQYVNPANPK--DNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSE 282
S +GR+ + + K D + +C S GG V + FHP +A G +
Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-----VTYVDFHPSGTCIAAAGMD 208
Query: 283 GTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
T WD ++ + +++ + + +G A S
Sbjct: 209 NTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASS 249
Score = 41 (19.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/59 (23%), Positives = 21/59 (35%)
Query: 235 VNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDAR 293
V ++ K + HR Q I V F P + + + T WDK +R
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 140 (54.3 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 38/120 (31%), Positives = 61/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 61 KDAVTCVNFSPSG---HLLASGSRDKTVRIWI--PNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A DKTVK W + + ++QH V+ + +P+ +++ S DKT+K WD
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARF--SPDGRLIVSASDDKTVKLWD 173
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ KT + + E V ++D G
Sbjct: 148 VRCARFSPDGR---LIVSASDDKTVKLWD-----KTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + A D TVK WD+ +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 200 TCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY--LLTASSDSTLKILD 257
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 258 LMEGRLLYTLH 268
Score = 110 (43.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 32/105 (30%), Positives = 47/105 (44%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+ S D V+ W K + Q ++ V + DG + A DKTVK WD
Sbjct: 118 LVTASDDKTVKVWSTHRQ-KFLFSLSQHINW-VRCARFSPDGRLIVSASDDKTVKLWDKT 175
Query: 107 SNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
S + + +H V + P+ TC+ S D T+K WD+RT
Sbjct: 176 SRECVHSYCEHGGFVTYVDF--HPSGTCIAAASMDNTVKVWDVRT 218
Score = 103 (41.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/118 (27%), Positives = 54/118 (45%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+I+ + FS +T L +GS D+ + W ++P + G + V V + G
Sbjct: 20 DAITSVDFSLNTKQ---LASGSMDSCLMVWHMKPQSRAY--RFAGHKDAVTCVNFSPSGH 74
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + L+T S DKT+K W
Sbjct: 75 LLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCS--DGQSLVTASDDKTVKVW 130
Score = 60 (26.2 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVN + FHP L T S+ T D L +T A + G+ FA
Sbjct: 231 AVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 159 (61.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 51/165 (30%), Positives = 78/165 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+A P + + I GS D ++ W++ GK + ++ G V DVA D +
Sbjct: 142 VRCVAIDP--VDNEWFITGSNDTTMKVWDLA-TGK-LKTTLAGHVMTVRDVAVSDRHPYL 197
Query: 92 FMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
F DKTVKCWDL NQ ++ H + V+T I P + T D +K WD+RT
Sbjct: 198 FSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVS-IH-PTLDLIATAGRDSVIKLWDMRT 255
Query: 151 PQPIMTI---NLP-ERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
P++T+ P + C VD P V + + L+ + GK
Sbjct: 256 RIPVITLVGHKGPINQVQCTPVD-PQVVSSSTDATVRLWDVVAGK 299
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 139 (54.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 61 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A DKTVK W + + + QH V+ + +P+ +++ S DKT+K WD
Sbjct: 116 QSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 173
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ KT + + E V ++D G
Sbjct: 148 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KTSRECIHSYCEHGGFVTYVDFHPSG 199
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG D TVK WD +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 200 TCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY--LITASSDSTLKILD 257
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 258 LMEGRLLYTLH 268
Score = 115 (45.5 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 33/118 (27%), Positives = 55/118 (46%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+++C+ FS +T L +GS D+ + W ++P + G + V V + G
Sbjct: 20 DAVTCVDFSLNTK---HLASGSMDSTLMIWHMKPQSRAY--RFTGHKDAVTCVNFSPSGH 74
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + L+T S DKT+K W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS--DGQSLVTASDDKTVKVW 130
Score = 101 (40.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/105 (28%), Positives = 45/105 (42%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+ S D V+ W + + Q ++ V + DG + A DKTVK WD
Sbjct: 118 LVTASDDKTVKVWSTHRQ-RFLFSLTQHINW-VRCAKFSPDGRLIVSASDDKTVKLWDKT 175
Query: 107 SNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
S + + +H V + P+ TC+ D T+K WD RT
Sbjct: 176 SRECIHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDART 218
Score = 60 (26.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVN + FHP L T S+ T D L +T A + G+ FA
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
Score = 57 (25.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/101 (21%), Positives = 39/101 (38%)
Query: 225 SVEGRVAIQYVNPANPK--DNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSE 282
S +GR+ + + K D + +C S GG V + FHP +A G +
Sbjct: 154 SPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGF-----VTYVDFHPSGTCIAAAGMD 208
Query: 283 GTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
T WD L+ + +++ + + +G A S
Sbjct: 209 NTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 249
Score = 41 (19.5 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 14/59 (23%), Positives = 21/59 (35%)
Query: 235 VNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDAR 293
V ++ K + HR Q I V F P + + + T WDK +R
Sbjct: 119 VTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR 177
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 138 (53.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 61 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A DKTVK W + + ++QH V+ + +P+ +++ S DKT+K WD
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 173
Score = 127 (49.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ KT + + E V ++D G
Sbjct: 148 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG D TVK WD+ +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 200 TCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY--LVTASSDSTLKILD 257
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 258 LMEGRLLYTLH 268
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/108 (29%), Positives = 47/108 (43%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
Q F+ A D V+ W K + Q ++ V + DG + A DKTVK W
Sbjct: 116 QSFVTASD-DKTVKVWSTHRQ-KFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 104 DLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D S + + +H V + P+ TC+ D T+K WD+RT
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDF--HPSGTCIAAAGMDNTVKVWDVRT 218
Score = 97 (39.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+++ + FS +T L +GS D+ + W ++P +T G + V V + G
Sbjct: 20 DAVTSVDFSLNTKQ---LASGSMDSCLMVWHMKP--QTRAYRFAGHKDAVTCVNFSPSGH 74
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + +T S DKT+K W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCS--DGQSFVTASDDKTVKVW 130
Score = 61 (26.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVN + FHP L T S+ T D L +T A + G+ FA
Sbjct: 231 AVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 287
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 136 (52.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L +GS D VR W PN K + + V V + DG
Sbjct: 92 KDAVTCVNFSPSG---HLLASGSRDKTVRIWV--PNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A DKT+K W + + ++QH V+ + +P+ +++ S DKT+K WD
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKF--SPDGRLIVSASDDKTVKLWD 204
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/131 (31%), Positives = 63/131 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID---DG 88
+ C FSP +++ S D V+ W+ KT + + E V ++D G
Sbjct: 179 VRCAKFSPDGR---LIVSASDDKTVKLWD-----KTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T V AG D TVK WD+ +++ +Q Q H A V + + NY L+T S D TLK D
Sbjct: 231 TCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY--LVTASSDSTLKILD 288
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 289 LMEGRLLYTLH 299
Score = 105 (42.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+++C+ FS + Q L +GS D+ + W ++P + G + V V + G
Sbjct: 51 DAVTCVDFS-FNMKQ--LASGSMDSCLMVWHMKPQSRAY--RFTGHKDAVTCVNFSPSGH 105
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ DKTV+ W +S H A V++ H+ + +T S DKT+K W
Sbjct: 106 LLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCS--DGQSFVTASDDKTIKVW 161
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/108 (28%), Positives = 47/108 (43%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
Q F+ A D ++ W K + Q ++ V + DG + A DKTVK W
Sbjct: 147 QSFVTASD-DKTIKVWSTHRQ-KFLFSLSQHINW-VRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 104 DLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D S + + +H V + P+ TC+ D T+K WD+RT
Sbjct: 204 DKTSRECVHSYCEHGGFVTYVDF--HPSGTCVAAAGMDNTVKVWDVRT 249
Score = 61 (26.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/57 (29%), Positives = 22/57 (38%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
AVN + FHP L T S+ T D L +T A + G+ FA
Sbjct: 262 AVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA 318
Score = 56 (24.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/101 (21%), Positives = 39/101 (38%)
Query: 225 SVEGRVAIQYVNPANPK--DNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSE 282
S +GR+ + + K D + +C S GG V + FHP +A G +
Sbjct: 185 SPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGF-----VTYVDFHPSGTCVAAAGMD 239
Query: 283 GTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
T WD L+ + +++ + + +G A S
Sbjct: 240 NTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 280
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 155 (59.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/106 (27%), Positives = 55/106 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWDN +R W++ T + +G ++ V+ VA+ D ++ D T+K W+
Sbjct: 84 FALSGSWDNTLRLWDITKGVST--RLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNT 141
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRT 150
+ +A I+ +PN +++GSWD +K WD+++
Sbjct: 142 LGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS 187
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D +SC+ FSP+T P +++GSWDN V+ W+++ ++ + V V DG
Sbjct: 156 QDWVSCIRFSPNT-PT--IVSGSWDNKVKIWDIK--SFKCNHTLTDHTGYVNTVTISPDG 210
Query: 89 TKVFMAGCDKTVKC-WDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ G D T C W+L+S + + + + + +PN L + DK + WD
Sbjct: 211 SLCASGGKD-TFACLWELSSGKPLYKLEARNTINALAF--SPNKYWLSAATDDKII-IWD 266
Query: 148 LRTPQPIMTINLPE 161
L T Q + I +PE
Sbjct: 267 LLTKQVLAEI-VPE 279
Score = 114 (45.2 bits), Expect = 0.00060, P = 0.00060
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIP----KSMQGMSEPVLDVAWIDD 87
++ +A SP P +I+ S D V W++ P T P +S++G S V DV D
Sbjct: 24 VTSIAVSPEN-PDT-IISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHD 81
Query: 88 GTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
G D T++ WD+ S ++ + H V + + + N +++GS D T+K W
Sbjct: 82 GQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAF-SSDNRQ-IISGSRDATIKVW 139
Query: 147 D 147
+
Sbjct: 140 N 140
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 144 (55.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 50/177 (28%), Positives = 79/177 (44%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 197 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 251
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 252 RGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTIDVLVTCS 309
Query: 139 WDKTLKFWDLRTPQPIMTI----NLPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T+ N C + P V G+ I L+ L GK
Sbjct: 310 RDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAE-PQVVTGSHDTTIRLWDLVAGK 365
Score = 57 (25.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 17/73 (23%), Positives = 32/73 (43%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V ++ HP H T A+ GS W ++ + I+T +N +G + + A
Sbjct: 376 SVRAVILHPRHYTFAS-GSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGAD 434
Query: 323 S-----YDWSKGH 330
+ +DW G+
Sbjct: 435 NGTMHLWDWRTGY 447
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/121 (30%), Positives = 65/121 (53%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D + C F+P P +++GS+D +V+ WEV+ GK + K++ S+P+ V + +G+
Sbjct: 124 DFVFCCDFNP---PSNLIVSGSFDESVKIWEVK-TGKCL-KTLSAHSDPISAVNFNCNGS 178
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDA--PVKTCHWIK-APNYTCLMTGSWDKTLKFW 146
+ D + WD AS Q ++ + PV ++K +PN ++T + D TLK W
Sbjct: 179 LIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVS---FVKFSPNGKYILTATLDNTLKLW 235
Query: 147 D 147
D
Sbjct: 236 D 236
Score = 143 (55.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 35/129 (27%), Positives = 71/129 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEV-EPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
+IS + FSP+ +L + + D + W + N K K++ G S + DVAW D +
Sbjct: 41 AISSVKFSPNG---EWLASSAADALIIIWGAYDGNCK---KTLYGHSLEISDVAWSSDSS 94
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
++ A DKT+K WD+ S + ++ + + C P+ +++GS+D+++K W+++
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NLIVSGSFDESVKIWEVK 153
Query: 150 TPQPIMTIN 158
T + + T++
Sbjct: 154 TGKCLKTLS 162
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 153 (58.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 21 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 75
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 133
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 134 TGKCLKTL 141
Score = 149 (57.5 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 106 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 160
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 161 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 217
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 218 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 249
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 151 (58.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTINLPER-CYCADVDYPLAVVGTAGRGIV 183
+ + T + YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTCHKNEKYCIFANFSV----TGGKWIV 275
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 275
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 275
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 275
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 275
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 47 AVSSVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSNL 101
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD++S + ++ + H V C++ P +++GS+D++++ WD++
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVK 159
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 160 TGKCLKTL 167
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 44/156 (28%), Positives = 77/156 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ GK + K++ S+PV V + DG+ +
Sbjct: 132 VFCCNFNPQS---NLIVSGSFDESVRIWDVK-TGKCL-KTLPAHSDPVSAVHFNRDGSLI 186
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
+ D + WD AS Q ++ D PV ++K +PN ++ + D TLK WD
Sbjct: 187 VSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILAATLDNTLKLWDY 243
Query: 149 RTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ + T YC ++ + T G+ IV
Sbjct: 244 SKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 275
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 141 (54.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DK 98
T + +++GSWD V+ W+ P GK++ + +G + W F + D+
Sbjct: 122 TRGEQLVVSGSWDQTVKLWD--PTVGKSLC-TFRGHESVIYSTIWSPHIPGCFASSSGDQ 178
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT-PQPIMT 156
T++ WD+ + + V H A + +C W K N ++TG+ D +L+ WDLR QP+
Sbjct: 179 TLRIWDVKTTGVRIVVPAHQAEILSCDWCKY-NENLVVTGAVDCSLRGWDLRNVQQPVFE 237
Query: 157 I 157
+
Sbjct: 238 L 238
Score = 109 (43.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVK 101
Q++ IAGS + + +G + +S ++ + DV W ++ V + C D +++
Sbjct: 38 QHYGIAGS--GTLLILDQNESGLRLFRSFD-WNDGLFDVTWSENNEHVLVT-CSGDGSLQ 93
Query: 102 CWDLA-SNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD A + +QV +H V + W + +++GSWD+T+K WD
Sbjct: 94 LWDTARATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Score = 105 (42.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 29/112 (25%), Positives = 59/112 (52%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSM-QGMSEPVLDVAWIDD-GTKVFMAGC-DKTV 100
++ L+ S D +++ W+ T P + + ++ V V W G ++ ++G D+TV
Sbjct: 80 EHVLVTCSGDGSLQLWDTAR--ATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTV 137
Query: 101 KCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYT-CLMTGSWDKTLKFWDLRT 150
K WD +S+ + H++ + + W +P+ C + S D+TL+ WD++T
Sbjct: 138 KLWDPTVGKSLCTFRGHESVIYSTIW--SPHIPGCFASSSGDQTLRIWDVKT 187
Score = 50 (22.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWD 289
YA+ + F P H + LA+ + T FW+
Sbjct: 243 YAIRRVKFSPFHASVLASCSYDFTVRFWN 271
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 139 (54.0 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P G ++ + +G + W F A D+
Sbjct: 117 TRDEQLVVSGSWDQTVKVWD--PTVGNSLC-TFRGHESVIYSTIWSPHIPGCFASASGDQ 173
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ + + + H A + +C W K N L+TG+ D +L+ WDLR QP+
Sbjct: 174 TLRIWDVKTTGVRIVIPAHQAEILSCDWCKY-NENLLVTGAVDCSLRGWDLRNVRQPVFE 232
Query: 157 I 157
+
Sbjct: 233 L 233
Score = 106 (42.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVK 101
Q++ IAG + + +G I +S ++ + DV W ++ V + C D +++
Sbjct: 33 QHYGIAGC--GTLLVLDQNESGLQIFRSFD-WNDGLFDVTWSENNEHVLVT-CSGDGSLQ 88
Query: 102 CWDLA-SNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD A + +QV +H V + W + + +++GSWD+T+K WD
Sbjct: 89 LWDTAKATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWD 136
Score = 101 (40.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 29/112 (25%), Positives = 54/112 (48%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSM-QGMSEPVLDVAWID--DGTKVFMAGCDKTV 100
++ L+ S D +++ W+ T P + + ++ V V W D V D+TV
Sbjct: 75 EHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTV 132
Query: 101 KCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYT-CLMTGSWDKTLKFWDLRT 150
K WD S+ + H++ + + W +P+ C + S D+TL+ WD++T
Sbjct: 133 KVWDPTVGNSLCTFRGHESVIYSTIW--SPHIPGCFASASGDQTLRIWDVKT 182
Score = 52 (23.4 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 18/75 (24%), Positives = 29/75 (38%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAY 320
YA+ + F P H + LA+ + T FW+ L + TC L+ + Q
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWNFSKPDPLLETVEHHTEF-TCGLDLSLQSPTE 296
Query: 321 AVSYDWSKGHEHNNP 335
W + + NP
Sbjct: 297 VADCSWDETVKIYNP 311
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 153 (58.9 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 36/128 (28%), Positives = 71/128 (55%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++S + FSP+ +L + S D ++ W +GK K++ G + DVAW D
Sbjct: 74 AVSAVKFSPNG---EWLASSSADKLIKIWGAY-DGK-FEKTISGHKLGISDVAWSSDSRL 128
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ DKT+K W+L++ +S++ + H V C++ P +++GS+D++++ WD+R
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 186
Query: 150 TPQPIMTI 157
T + + T+
Sbjct: 187 TGKCLKTL 194
Score = 150 (57.9 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 45/168 (26%), Positives = 80/168 (47%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + + + + C F+P + +++GS+D +VR W+V GK + K++ S+PV
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQS---NLIVSGSFDESVRIWDVR-TGKCL-KTLPAHSDPV 201
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIK-APNYTCLMT 136
V + DG+ + + D + WD AS Q ++ D PV ++K +PN ++
Sbjct: 202 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS---FVKFSPNGKYILA 258
Query: 137 GSWDKTLKFWDLRTPQPIMTIN-LPERCYCADVDYPLAVVGTAGRGIV 183
+ D TLK WD + + T YC ++ + T G+ IV
Sbjct: 259 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSV----TGGKWIV 302
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 159 (61.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +GS D N+R W+ G ++ +G + + + + DG V G D VK WDL
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCI--QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDL 171
Query: 106 ASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPE 161
+ + + + H+ P+++ + P L TGS D+T+KFWDL T + I T PE
Sbjct: 172 TAGKLLHEFKCHEGPIRSLDF--HPLEFLLATGSADRTVKFWDLETFELIGTTR-PE 225
Score = 113 (44.8 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 48/179 (26%), Positives = 70/179 (39%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTI-PKSMQGMSEPVLDVAWIDDGT 89
+++C++ T L+ G D V W + GKT P S+ G + PV VA+ +
Sbjct: 17 NVNCLSIGKKT--SRLLLTGGDDYKVNLWSI---GKTTSPMSLCGHTSPVDSVAFNSEEV 71
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGSWDKTLKFWDL 148
V +K WDL +S V C ++ P L +GS D L+ WD
Sbjct: 72 LVLAGASSGVIKLWDL--EESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDT 129
Query: 149 RTPQPIMTINLPERCYCA---DVDYPLAVVGTAGRGIVLYQLE-GKP-QEFKKTESPLK 202
R I T R D V G + ++ L GK EFK E P++
Sbjct: 130 RKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIR 188
Score = 62 (26.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQ 316
+ + FHP+ LAT ++ T FWD + + + + A + +GQ
Sbjct: 187 IRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQ 239
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 126 (49.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 336 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 393
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 394 RTGRCIMFLE--GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 444
Score = 73 (30.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 451 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 509
Query: 323 SYD 325
SYD
Sbjct: 510 SYD 512
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 126 (49.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 337 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 394
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 395 RTGRCIMFLE--GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 445
Score = 73 (30.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 452 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 510
Query: 323 SYD 325
SYD
Sbjct: 511 SYD 513
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 126 (49.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 352 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 409
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 410 RTGRCIMFLE--GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 460
Score = 73 (30.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 467 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 525
Query: 323 SYD 325
SYD
Sbjct: 526 SYD 528
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 126 (49.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 354 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 411
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 412 RTGRCIMFLE--GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 462
Score = 73 (30.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 469 VTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 527
Query: 323 SYD 325
SYD
Sbjct: 528 SYD 530
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 126 (49.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 336 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 393
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 394 RTGRCIMFLE--GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 444
Score = 72 (30.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 451 VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 509
Query: 323 SYD 325
SYD
Sbjct: 510 SYD 512
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 126 (49.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D + R W++E + + + +G S V D+A+ DG+ G D + WDL
Sbjct: 336 FLGTTCYDRSWRLWDLEAQEEILHQ--EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDL 393
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + I +PN + TGS D T K WDLR + + TI
Sbjct: 394 RTGRCIMFLE--GHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTI 444
Score = 72 (30.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P+HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 451 VTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIA-TC 509
Query: 323 SYD 325
SYD
Sbjct: 510 SYD 512
>ZFIN|ZDB-GENE-050417-342 [details] [associations]
symbol:nsmaf "neutral sphingomyelinase (N-SMase)
activation associated factor" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF02893 ZFIN:ZDB-GENE-050417-342
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 GeneTree:ENSGT00670000097747 CTD:8439 EMBL:CR354563
EMBL:CU929087 IPI:IPI00497443 RefSeq:XP_003199050.1
UniGene:Dr.88496 Ensembl:ENSDART00000073635 GeneID:550506
KEGG:dre:550506 NextBio:20879748 ArrayExpress:F1QZ06 Bgee:F1QZ06
Uniprot:F1QZ06
Length = 911
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 48/136 (35%), Positives = 70/136 (51%)
Query: 31 SISCMAFSPST-LPQ-YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
S S MA S LP ++ SWDNNV + + G+ ++ G + V D+ W DD
Sbjct: 662 SFSNMALSSCLMLPDDKIVVCSSWDNNVYFYSIA-YGRR-QDTLMGHDDAVSDICWRDD- 718
Query: 89 TKVFMAGCDKTVKCW-----DLASNQSMQ---VAQ--HDAPVKTCHWIKAPNYTCLMTGS 138
K++ A D TVK W D++SN+ Q +A+ H+A V T +P T L TG+
Sbjct: 719 -KLYTASWDSTVKVWECVAADISSNKRTQFDPLAEFEHEAGVNTLDL--SPAGTLLATGT 775
Query: 139 WDKTLKFWDLRTPQPI 154
+ TL WDL +P P+
Sbjct: 776 KEGTLTVWDLASPLPV 791
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 152 (58.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 33/121 (27%), Positives = 62/121 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
ISC+ F P + + L++GS DN ++ WEV + +++ ++ QG + P+ D+++ DG
Sbjct: 269 ISCLRFFP--ISGHLLLSGSMDNQIKIWEVY-HDRSLLRTFQGHARPIRDLSFSQDGRSF 325
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTC-LMTGSWDKTLKFWDLRT 150
DKT+K WD + + D + P+ + G+ DK + +D+R+
Sbjct: 326 LSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRS 385
Query: 151 P 151
P
Sbjct: 386 P 386
Score = 43 (20.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 14/57 (24%), Positives = 22/57 (38%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDM-SISTCALNHNGQIFA 319
+N I F T + + FW+ +K + M S+ AL NG+ A
Sbjct: 399 INSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPNGKSIA 455
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 154 (59.3 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
Score = 41 (19.5 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 269 FHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
F PV G A G G S W KD + L P +
Sbjct: 526 FLPVSGGPAP-GQGG--SLWGKDRTSPLAPGHS 555
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 154 (59.3 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 154 (59.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D N++ W++ G +G S+ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVF--RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + M + H PV + PN L +GS D+T++FWDL Q + I
Sbjct: 177 TAGKMMSEFPGHTGPVNVVEF--HPNEYLLASGSSDRTIRFWDLEKFQVVSCI 227
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 127 (49.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 21 DFEVVSPPEDS-ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+FE + +S I M +S +L++G + V+ W+ PN + ++ + V
Sbjct: 168 NFETIMQAHESPILTMKYSNH---DEWLLSGDQNGTVKYWQ--PNFNNV-NNISAHANGV 221
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGS 138
D+A+ + +K G D +K W+ + + + ++ H VK+ W PN +++GS
Sbjct: 222 RDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADW--HPNLGLIVSGS 279
Query: 139 WDKTLKFWDLRTPQPIMTIN 158
D +K WD R+ + T++
Sbjct: 280 KDNLVKLWDPRSANCVSTLH 299
Score = 69 (29.3 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 219 AGYGLGSVEGRVAIQYVNPAN---PK--DNFTFKCHRSNGGAGGVQDI-YA----VNGIV 268
A Y GS+ + Y+ +N PK +N + +N VQ I YA ++ +
Sbjct: 365 AAYN-GSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNTIDAVQKIPYAHEKAIHAVE 423
Query: 269 FHPVHGTLATVGSEGTFSFWDK 290
+HP+ L T GS+ T FW +
Sbjct: 424 YHPLGHLLCTAGSDKTARFWSR 445
Score = 41 (19.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 267 IVFHPVHGTLATVGS-EGTFS 286
+ +HP+H ++ T + G+ S
Sbjct: 352 VAWHPIHASMVTTAAYNGSIS 372
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 127 (49.8 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 21 DFEVVSPPEDS-ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+FE + +S I M +S +L++G + V+ W+ PN + ++ + V
Sbjct: 168 NFETIMQAHESPILTMKYSNH---DEWLLSGDQNGTVKYWQ--PNFNNV-NNISAHANGV 221
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGS 138
D+A+ + +K G D +K W+ + + + ++ H VK+ W PN +++GS
Sbjct: 222 RDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADW--HPNLGLIVSGS 279
Query: 139 WDKTLKFWDLRTPQPIMTIN 158
D +K WD R+ + T++
Sbjct: 280 KDNLVKLWDPRSANCVSTLH 299
Score = 69 (29.3 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 219 AGYGLGSVEGRVAIQYVNPAN---PK--DNFTFKCHRSNGGAGGVQDI-YA----VNGIV 268
A Y GS+ + Y+ +N PK +N + +N VQ I YA ++ +
Sbjct: 365 AAYN-GSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNTIDAVQKIPYAHEKAIHAVE 423
Query: 269 FHPVHGTLATVGSEGTFSFWDK 290
+HP+ L T GS+ T FW +
Sbjct: 424 YHPLGHLLCTAGSDKTARFWSR 445
Score = 41 (19.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 267 IVFHPVHGTLATVGS-EGTFS 286
+ +HP+H ++ T + G+ S
Sbjct: 352 VAWHPIHASMVTTAAYNGSIS 372
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 148 (57.2 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 40/113 (35%), Positives = 58/113 (51%)
Query: 37 FSPSTLPQYFLI-AGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAG 95
F S PQ LI +GS+D NVR W+V T K + S+PV V + DGT V
Sbjct: 134 FGVSFNPQSNLIVSGSFDENVRIWDVNTGECT--KMISAHSDPVTGVHFNRDGTLVVSGS 191
Query: 96 CDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFW 146
D TV+ WD + Q + ++ D K ++K +PN ++ G+ D TL+ W
Sbjct: 192 YDGTVRIWDTTTGQLLNTISTEDG--KEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS + FSP +L + S D ++ W +GK ++++G E + D+AW D
Sbjct: 48 SISSVKFSPDGK---WLASASADKTIKIWGAY-DGK-FERTLEGHKEGISDIAWSQDSKL 102
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K WD+ S + ++ + H V + P +++GS+D+ ++ WD+
Sbjct: 103 ICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSF--NPQSNLIVSGSFDENVRIWDVN 160
Query: 150 T 150
T
Sbjct: 161 T 161
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 131 (51.2 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 37/143 (25%), Positives = 72/143 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D+++C+ FSPS + L + S D VR W G+++ + + V V + DG
Sbjct: 60 KDAVTCVQFSPSA---HLLASSSRDKTVRLWVPSVKGESV--LFRAHTGSVRSVCFSADG 114
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A D+++K W + + + + +H+ V+ + +P+ +++ S D+T+K WD
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARF--SPDGQLMVSVSDDRTVKLWD 172
Query: 148 LRTPQPIMTINLPERCYCADVDY 170
+ Q I T P Y + VD+
Sbjct: 173 ASSRQLIHTFCEPGG-YSSYVDF 194
Score = 106 (42.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+ S D +++ W V + + I +++ + V + DG + D+TVK WD +
Sbjct: 117 LLTASDDQSIKLWSV--HRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDAS 174
Query: 107 SNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGSWDKTLKFWDLRT 150
S Q + P ++ P+ TC+ T S D T++ WD+RT
Sbjct: 175 SRQLIHTFCE--PGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Score = 100 (40.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 41/166 (24%), Positives = 71/166 (42%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+I+ + FSPS + +GS D +V W ++P + G + V V +
Sbjct: 19 DAITSLDFSPSGKQ---IASGSVDASVMVWNMKPQSRAY--RFTGHKDAVTCVQFSPSAH 73
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWD 147
+ + DKTV+ W +S+ H V++ C A + L+T S D+++K W
Sbjct: 74 LLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVC--FSADGQS-LLTASDDQSIKLWS 130
Query: 148 LRTPQPIMTI---NLPERCYCADVDYPLAVVGTAGRGIVLYQLEGK 190
+ + I T+ N RC D L V + R + L+ +
Sbjct: 131 VHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSR 176
Score = 60 (26.2 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 269 FHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
FHP +AT S+ T WD T L+ + +++ + + +G
Sbjct: 194 FHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSG 240
Score = 58 (25.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 19/61 (31%), Positives = 24/61 (39%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
AVN + FHP L T S+ T D L S S + + +G FA A
Sbjct: 230 AVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAG 289
Query: 323 S 323
S
Sbjct: 290 S 290
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/156 (27%), Positives = 78/156 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ G I K++ S+PV V++ DG+ +
Sbjct: 174 VFCCNFNPQSS---LVVSGSFDESVRIWDVK-TGMCI-KTLPAHSDPVSAVSFNRDGSLI 228
Query: 92 FMAGCDKTVKCWDLASNQSMQ--VAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
D V+ WD A+ Q ++ V + PV ++K +PN ++ + D TLK WD
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVA---FVKFSPNGKYILASNLDSTLKLWDF 285
Query: 149 RTPQPIMTINLPERC-YCADVDYPLAVVGTAGRGIV 183
+ + E YC ++ + T G+ I+
Sbjct: 286 SKGKTLKQYTGHENSKYCIFANFSV----TGGKWII 317
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS FSP +L S D V+ W ++ +++ G V D+AW D
Sbjct: 89 SISSAKFSPCGK---YLGTSSADKTVKIWNMDH--MICERTLTGHKLGVNDIAWSSDSRC 143
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
V A DKT+K +++ +++ + + H+ V C++ P + +++GS+D++++ WD++
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF--NPQSSLVVSGSFDESVRIWDVK 201
Query: 150 TPQPIMTI 157
T I T+
Sbjct: 202 TGMCIKTL 209
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 43/156 (27%), Positives = 78/156 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V+ G I K++ S+PV V++ DG+ +
Sbjct: 174 VFCCNFNPQSS---LVVSGSFDESVRIWDVK-TGMCI-KTLPAHSDPVSAVSFNRDGSLI 228
Query: 92 FMAGCDKTVKCWDLASNQSMQ--VAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
D V+ WD A+ Q ++ V + PV ++K +PN ++ + D TLK WD
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKTLVDDENPPVA---FVKFSPNGKYILASNLDSTLKLWDF 285
Query: 149 RTPQPIMTINLPERC-YCADVDYPLAVVGTAGRGIV 183
+ + E YC ++ + T G+ I+
Sbjct: 286 SKGKTLKQYTGHENSKYCIFANFSV----TGGKWII 317
Score = 132 (51.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS FSP +L S D V+ W ++ +++ G V D+AW D
Sbjct: 89 SISSAKFSPCGK---YLGTSSADKTVKIWNMDH--MICERTLTGHKLGVNDIAWSSDSRC 143
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
V A DKT+K +++ +++ + + H+ V C++ P + +++GS+D++++ WD++
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF--NPQSSLVVSGSFDESVRIWDVK 201
Query: 150 TPQPIMTI 157
T I T+
Sbjct: 202 TGMCIKTL 209
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 150 (57.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+S +AF PS FL +D++ R W++E KT +G ++PV +++ DG+ +
Sbjct: 356 VSKVAFHPSGR---FLATACYDSSWRLWDLEQ--KTEVLHQEGHAKPVHCLSYHSDGSVL 410
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
G D + WDL + + + + H V + +PN + TGS D T K WDLR
Sbjct: 411 VTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDF--SPNGFHIATGSQDNTCKIWDLRR 468
Query: 151 PQPIMTI 157
QP+ TI
Sbjct: 469 RQPVYTI 475
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/50 (24%), Positives = 18/50 (36%)
Query: 276 LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
L T + T W LK + D + + + N Q A S+D
Sbjct: 495 LVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIA-TTSFD 543
Score = 37 (18.1 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 276 LATVGSEGTFSFWDKDA 292
+AT + TF W D+
Sbjct: 537 IATTSFDRTFKLWSPDS 553
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/119 (33%), Positives = 63/119 (52%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS + F P + +Y L +GS D+N++ W+V G +G ++ V +A+ DG
Sbjct: 107 SISSLDFHP--MGEY-LASGSVDSNIKLWDVRRKGCVF--RYKGHTQAVRCLAFSPDGKW 161
Query: 91 VFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ A D TVK WDL + + + + H + V + PN L +GS D+T+K WDL
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQF--HPNEYLLASGSADRTVKLWDL 218
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 127 (49.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 34/113 (30%), Positives = 58/113 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +D++ R W++E + + + +G S+ V D+A+ DG+ G D + WDL
Sbjct: 336 FLGTTCYDHSWRLWDLEAQEEILHQ--EGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDL 393
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + + +K + + +PN + TGS D T K WDLR + I TI
Sbjct: 394 RTGRCIMFLE--GHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTI 444
Score = 65 (27.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V G+ F P HG G+ + T W + LK + + ++ +GQ+ A
Sbjct: 451 VTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIA-TC 509
Query: 323 SYD 325
SYD
Sbjct: 510 SYD 512
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/133 (26%), Positives = 72/133 (54%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D + +AFSP L +G +D+ ++ W+ G+ + ++++G S+ + V + DG
Sbjct: 1129 DWVDSVAFSPDGKQ---LASGYYDSTIKLWD-SATGELL-QTLEGHSDRIQSVVFSPDGK 1183
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ D+T K WD A+ + +Q+ + H V++ + +P+ L + S+ +T+K WD
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAF--SPDGKLLASSSYGETIKLWDP 1241
Query: 149 RTPQPIMTINLPE 161
T + + T+N P+
Sbjct: 1242 VTGELLQTLNDPD 1254
Score = 143 (55.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
++ +AFSP L +GS+DN + W+ G+ + ++ +G + VA+ DG +
Sbjct: 794 TVESLAFSPDGK---LLASGSYDNTIDLWD-SATGELL-QTFEGHPHSIWSVAFAPDGKE 848
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A D T+K WDLA+ + Q H V++ + +P+ L + S D T+K W+
Sbjct: 849 LASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAF--SPDGKLLASSSLDSTIKVWNPA 906
Query: 150 T 150
T
Sbjct: 907 T 907
Score = 141 (54.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 36/122 (29%), Positives = 64/122 (52%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ +AFSP L +GS N V+ W P + ++++G S+ V VA+ DG ++
Sbjct: 921 VKSVAFSPDGKK---LASGSEKNTVKLWN--PATGELLQTLEGHSQSVRSVAFSPDGKQL 975
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ D T+K W+ + + Q + HD ++ + +P+ L++GS D T+K WDL T
Sbjct: 976 ASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAF--SPDGKHLVSGSDDNTIKLWDLAT 1033
Query: 151 PQ 152
+
Sbjct: 1034 SE 1035
Score = 131 (51.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 33/120 (27%), Positives = 61/120 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ + FSP L + S+D ++ W P + +++ G S+ V VA+ DG ++
Sbjct: 1089 VRSVTFSPDGK---LLASNSYDGTIKLWN--PLTGELQQTLTGRSDWVDSVAFSPDGKQL 1143
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D T+K WD A+ + +Q + H +++ + +P+ L +GS+D+T K WD T
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSV--VFSPDGKLLASGSYDQTAKLWDPAT 1201
Score = 129 (50.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 34/127 (26%), Positives = 66/127 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I +AFSP L++GS DN ++ W++ + + +S++ S V VA+ D ++
Sbjct: 1005 IRAVAFSPDGK---HLVSGSDDNTIKLWDLATS--ELQQSLEDHSRSVHAVAFSPDDKQL 1059
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ D T+K WD A+ + + + H V++ + +P+ L + S+D T+K W+ T
Sbjct: 1060 ASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTF--SPDGKLLASNSYDGTIKLWNPLT 1117
Query: 151 PQPIMTI 157
+ T+
Sbjct: 1118 GELQQTL 1124
Score = 128 (50.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 35/128 (27%), Positives = 64/128 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ + FSP L++GS+D+ V+ W+ P + +++ G S V +A+ DG +
Sbjct: 753 VESVVFSPDGKQ---LVSGSYDDTVKIWD--PATGELLQTLDGHSGTVESLAFSPDGKLL 807
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D T+ WD A+ + +Q + H + + + AP+ L + S D T+K WDL T
Sbjct: 808 ASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAF--APDGKELASASDDSTIKIWDLAT 865
Query: 151 PQPIMTIN 158
+ T++
Sbjct: 866 GELQQTLD 873
Score = 123 (48.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 37/122 (30%), Positives = 64/122 (52%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
S+ +AFSP L + S D+ ++ W P + +S++G S V VA+ DG K
Sbjct: 878 SVRSVAFSPDGK---LLASSSLDSTIKVWN--PATGELQQSLEGRSGWVKSVAFSPDGKK 932
Query: 91 VFMAGCDK-TVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ +G +K TVK W+ A+ + +Q + H V++ + +P+ L + S D T+K W+
Sbjct: 933 L-ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAF--SPDGKQLASSSSDTTIKLWNS 989
Query: 149 RT 150
T
Sbjct: 990 TT 991
Score = 117 (46.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
S+ +AFSP L + S D ++ W G+ + ++ +G + VA+ DG
Sbjct: 962 SVRSVAFSPDGKQ---LASSSSDTTIKLWN-STTGE-LQQTFKGHDLWIRAVAFSPDGKH 1016
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLR 149
+ D T+K WDLA+++ Q + + ++ H + +P+ L + S D T+K WD
Sbjct: 1017 LVSGSDDNTIKLWDLATSELQQSLEDHS--RSVHAVAFSPDDKQLASSSLDSTIKLWDSA 1074
Query: 150 T 150
T
Sbjct: 1075 T 1075
Score = 111 (44.1 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 60 EVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDA 118
+VE ++++ PV V + DG ++ D TVK WD A+ + +Q H
Sbjct: 734 KVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSG 793
Query: 119 PVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
V++ + +P+ L +GS+D T+ WD T + + T
Sbjct: 794 TVESLAF--SPDGKLLASGSYDNTIDLWDSATGELLQT 829
Score = 57 (25.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+V+ + F P LA+ + T WD + E + + + +G++ A +
Sbjct: 1046 SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA-SN 1104
Query: 323 SYD 325
SYD
Sbjct: 1105 SYD 1107
Score = 54 (24.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
V+ + F P LA+ + T WD L+ E I + + +G++ A S
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASG-S 1189
Query: 324 YD 325
YD
Sbjct: 1190 YD 1191
Score = 51 (23.0 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 264 VNGIVFHPVHGTLATVGS-EGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
+ +VF P G L GS + T WD L+ E + + A + +G++ A +
Sbjct: 1173 IQSVVFSP-DGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS- 1230
Query: 323 SY 324
SY
Sbjct: 1231 SY 1232
Score = 50 (22.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
V + F P LA+ + T W+ L+ E S+ + A + +G+ A + S
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS 980
Score = 47 (21.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/54 (22%), Positives = 23/54 (42%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQ 316
+V + F P LA+ S+ T W+ + + D+ I A + +G+
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGK 1015
Score = 45 (20.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 17/63 (26%), Positives = 23/63 (36%)
Query: 264 VNGIVFHPVHGTLATVGSEG-TFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
V + F P G L S G T WD L+ D S + A + +G A
Sbjct: 1215 VESVAFSP-DGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVD 1273
Query: 323 SYD 325
+D
Sbjct: 1274 IFD 1276
Score = 42 (19.8 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 23/96 (23%), Positives = 36/96 (37%)
Query: 218 PAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLA 277
P G L S I+ N + TFK H D++ + + F P L
Sbjct: 970 PDGKQLASSSSDTTIKLWNSTTGELQQTFKGH----------DLW-IRAVAFSPDGKHLV 1018
Query: 278 TVGSEGTFSFWDKDARTKLKPS-EAMDMSISTCALN 312
+ + T WD A ++L+ S E S+ A +
Sbjct: 1019 SGSDDNTIKLWDL-ATSELQQSLEDHSRSVHAVAFS 1053
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
V + F P LA+ +GT W+
Sbjct: 1089 VRSVTFSPDGKLLASNSYDGTIKLWN 1114
Score = 39 (18.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPS-EAMDMSISTCALNHNGQIFA 319
+V + F P LA+ + T W+ A +L+ S E + + A + +G+ A
Sbjct: 878 SVRSVAFSPDGKLLASSSLDSTIKVWNP-ATGELQQSLEGRSGWVKSVAFSPDGKKLA 934
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 30/106 (28%), Positives = 58/106 (54%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+ ++GSWD +R W++ GKT + +G ++ VL VA+ D ++ DKT+K W+
Sbjct: 78 YALSGSWDQTLRLWDLAA-GKTT-RRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT 135
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYT--CLMTGSWDKTLKFWDL 148
+ + Q D ++ +PN++ +++ WD+T+K W+L
Sbjct: 136 LAECKFTI-QEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNL 180
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 147 (56.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 40/116 (34%), Positives = 59/116 (50%)
Query: 35 MAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA 94
+AF PS Y L++ S+D R W+V + + + +G SE + +A DG+ V
Sbjct: 271 VAFHPSG--DY-LVSASFDTTWRLWDVHTGVELLMQ--EGHSEGIFSIACQPDGSLVSSG 325
Query: 95 GCDKTVKCWDLASNQSMQVA-QHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
G D + WDL S +S+ V +H + W +PN L T S D T+K WDLR
Sbjct: 326 GNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAW--SPNGYQLATSSADDTVKIWDLR 379
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 143 (55.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 38/113 (33%), Positives = 55/113 (48%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y AG D V+CW++E N K I +S G V +A V G D + WD
Sbjct: 226 YMFSAGD-DKQVKCWDLEQN-KVI-RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWD 282
Query: 105 LASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + V HD+ V + + P ++TGS D T+KFWDLR + + TI
Sbjct: 283 IRTKMQIFVLPHDSDVFSV--LARPTDPQVITGSHDSTIKFWDLRYGKSMATI 333
Score = 137 (53.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K++ V+ + +AF PS ++F GS D ++ W+V + ++ G V
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSN--EWFC-TGSADRTIKIWDVATG--VLKLTLTGHIGQV 215
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
+A + T +F AG DK VKCWDL N+ ++ C + P ++TG
Sbjct: 216 RGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH-PTLDVVLTGGR 274
Query: 140 DKTLKFWDLRTPQPIMTI 157
D + WD+RT I +
Sbjct: 275 DSVCRVWDIRTKMQIFVL 292
Score = 45 (20.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
+N + + G + T G +G FWD + + +E + + +L I YA
Sbjct: 382 INAVAVNE-DGVMVTGGDKGGLWFWDWKSGHNFQRAETI---VQPGSLESEAGI--YAAC 435
Query: 324 YD 325
YD
Sbjct: 436 YD 437
Score = 37 (18.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
V ++ P + T + T FWD
Sbjct: 298 VFSVLARPTDPQVITGSHDSTIKFWD 323
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 109 (43.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
E ++S + F P+ F+++ S D+ ++ W++ G + + +G ++ V + +DG
Sbjct: 191 EHTVSSVTFLPTG---DFVLSASRDHTIKQWDIS-TGYCV-YTFRGHNDWVRMIRISNDG 245
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYT-------------CL 134
T A D+TV W A+ + V + H+ V+ W YT L
Sbjct: 246 TLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHIL 305
Query: 135 MTGSWDKTLKFWDLRTPQPIMTI 157
+GS D+++K W++ T + T+
Sbjct: 306 FSGSRDRSIKAWNINTGDVLFTL 328
Score = 98 (39.6 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 26/117 (22%), Positives = 58/117 (49%)
Query: 43 PQYFLIAG-SWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVK 101
P + ++A S D ++ W+ E G+ + ++++G ++ V D+A G ++ D ++K
Sbjct: 116 PLWTIMASCSEDATIKVWDYE-TGQ-LERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIK 173
Query: 102 CWDLASNQSM--QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
WD + H+ V + ++ ++ +++ S D T+K WD+ T + T
Sbjct: 174 LWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDF--VLSASRDHTIKQWDISTGYCVYT 228
Score = 89 (36.4 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 29/108 (26%), Positives = 52/108 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIP--KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
L++ S D +++ W+ G+T KS++G V V ++ G V A D T+K WD
Sbjct: 163 LVSCSSDLSIKLWDF---GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWD 219
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNY-TCLMTGSWDKTLKFWDLRT 150
+++ + + H+ V+ I+ N T + S D+T+ W T
Sbjct: 220 ISTGYCVYTFRGHNDWVRM---IRISNDGTLFASASLDQTVTVWSFAT 264
Score = 80 (33.2 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 21/64 (32%), Positives = 29/64 (45%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
V G+ FHP L +V + T W+ A+ +K EA + +ST A H F S
Sbjct: 335 VRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAF-HQTSPFVITGS 393
Query: 324 YDWS 327
D S
Sbjct: 394 VDMS 397
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 120 (47.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 48 IAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDD-GTKVFMAGCDKTVKCWDLA 106
I GS+D + W+ +G+ + +++G V +A+ + G K+ DKT K W +
Sbjct: 108 ITGSYDRTCKLWDTA-SGEEL-HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVE 165
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + H A + C P T + TGS D T K WD+++ + + T+
Sbjct: 166 TGKCYHTFRGHTAEI-VCLSFN-PQSTLVATGSMDTTAKLWDIQSGEEVFTL 215
Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
Identities = 28/112 (25%), Positives = 54/112 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
++ GS D + W+ NGK + ++ G + +LD + G + A D T + + A
Sbjct: 276 ILTGSMDKTCKLWDAV-NGKCVA-TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 107 SNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + ++ H+ + + P L+TGS DKT + WD +T Q + +
Sbjct: 334 TRECVTKLEGHEGEISKISF--NPQGNRLLTGSSDKTARIWDAQTGQCLQVL 383
Score = 113 (44.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 28/112 (25%), Positives = 55/112 (49%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+ GS+D + W VE GK + +G + ++ +++ T V D T K WD+
Sbjct: 150 IATGSFDKTCKLWSVE-TGKCY-HTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 107 SNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
S + + + H A + + + + N ++TGS+D T+ W+ T + + T+
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNR--IITGSFDHTVTVWEADTGRKVYTL 257
Score = 93 (37.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 22/73 (30%), Positives = 32/73 (43%)
Query: 78 PVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
P+ +VA G+ D+T K WD AS + + + V P + TG
Sbjct: 94 PLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATG 153
Query: 138 SWDKTLKFWDLRT 150
S+DKT K W + T
Sbjct: 154 SFDKTCKLWSVET 166
Score = 68 (29.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
++ I F+P L T S+ T WD L+ E I +CA N+ G I
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDI 401
Score = 38 (18.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 276 LATVGSEGT---FSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
+AT ++GT FS ++ TKL+ E IS + N G
Sbjct: 318 IATASADGTARIFSAATRECVTKLEGHEG---EISKISFNPQG 357
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 150 (57.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 39/117 (33%), Positives = 63/117 (53%)
Query: 35 MAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA 94
+AFSP L +GS+D VR W+ P ++ ++++G S V VA+ DG +
Sbjct: 743 VAFSPDGR---LLASGSFDKTVRLWD--PATGSLQQTLRGHSNWVRSVAFSPDGRLLASG 797
Query: 95 GCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
DKTV+ WD A+ Q + H V++ + +P+ L +GS+DKT++ WD T
Sbjct: 798 SFDKTVRLWDPATGSLQQTLRGHSDTVRSVAF--SPDGRLLASGSFDKTVRLWDPAT 852
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/105 (34%), Positives = 58/105 (55%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L +GS D VR W+ P ++ ++++G S VL VA+ DG + DKTV+ WD A
Sbjct: 710 LASGSDDETVRLWD--PATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPA 767
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ Q + H V++ + +P+ L +GS+DKT++ WD T
Sbjct: 768 TGSLQQTLRGHSNWVRSVAF--SPDGRLLASGSFDKTVRLWDPAT 810
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 144 (55.7 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/119 (30%), Positives = 65/119 (54%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C F+P + +++GS+D +VR W+V G + K++ S+PV V++ DG+ +
Sbjct: 166 VFCCNFNPQSS---LVVSGSFDESVRIWDVR-TGMCV-KTLPAHSDPVSAVSFNRDGSLI 220
Query: 92 FMAGCDKTVKCWDLASNQSMQ--VAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWD 147
D V+ WD A+ Q ++ V + PV ++K +PN +++ + D TLK WD
Sbjct: 221 TSGSYDGLVRIWDTANGQCVKTLVDDENPPVA---FVKFSPNGKYILSSNLDNTLKLWD 276
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
SIS + FSP FL S D V+ W + + + +++ G V D AW D
Sbjct: 81 SISAVKFSPCGK---FLGTSSADKTVKIWNM--SDLSCERTLTGHKLGVNDFAWSADSKS 135
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ A DKT+K +++ + + + + H V C++ P + +++GS+D++++ WD+R
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNF--NPQSSLVVSGSFDESVRIWDVR 193
Query: 150 TPQPIMTI 157
T + T+
Sbjct: 194 TGMCVKTL 201
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 31/145 (21%), Positives = 66/145 (45%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D +S ++F+ + +GS+D VR W+ NG+ + + + PV V + +G
Sbjct: 206 DPVSAVSFNRDGS---LITSGSYDGLVRIWDTA-NGQCVKTLVDDENPPVAFVKFSPNGK 261
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHW--IKAPNYTCLMTGSWDKTLKFWD 147
+ + D T+K WD ++++ Q K C + +++GS D + W+
Sbjct: 262 YILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 148 LRTPQPIMTINLPERCYCADVDYPL 172
L+T + + ++ + A +P+
Sbjct: 322 LQTKEVVQSLEGHTQAVIASDCHPM 346
>ZFIN|ZDB-GENE-030131-3831 [details] [associations]
symbol:utp15 "utp15, U3 small nucleolar
ribonucleoprotein, homolog" species:7955 "Danio rerio" [GO:0005730
"nucleolus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-3831
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045766 InterPro:IPR018391
SMART:SM00564 GO:GO:0006364 CTD:84135 GeneTree:ENSGT00390000004228
HOGENOM:HOG000185028 HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK
OrthoDB:EOG4Q58P5 EMBL:AY398371 EMBL:BC045308 IPI:IPI00491201
RefSeq:NP_955998.1 UniGene:Dr.78694 ProteinModelPortal:Q7ZW33
STRING:Q7ZW33 Ensembl:ENSDART00000127397 Ensembl:ENSDART00000148774
GeneID:325106 KEGG:dre:325106 InParanoid:Q7ZW33 NextBio:20809122
Bgee:Q7ZW33 Uniprot:Q7ZW33
Length = 517
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+AGS + +R +++ G+ + +G S+ V +++ DG +V D T + WD+A
Sbjct: 95 LVAGSEEGLIRLFDI--GGRVSLRQFKGHSKAVHATSFLSDGFRVLSGSDDLTCRVWDVA 152
Query: 107 SNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
S + + +H ++ K N +TGS+D T+K +D+R+ +MT+ + C
Sbjct: 153 SAVELSSITEHTDYIRAIAPSKL-NPDVFVTGSYDHTVKMFDVRSGNSVMTMQHGQPVEC 211
Query: 166 ADVDYP--LAVVGTAGRGIVLYQL 187
+ YP +V T GR + ++ L
Sbjct: 212 VLL-YPSEALLVSTGGRYVKVWDL 234
>DICTYBASE|DDB_G0279903 [details] [associations]
symbol:wdr12 "NLE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279903 GO:GO:0005654 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042273 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
EMBL:AAFI02000034 RefSeq:XP_641483.1 ProteinModelPortal:Q54W52
STRING:Q54W52 EnsemblProtists:DDB0233985 GeneID:8622282
KEGG:ddi:DDB_G0279903 OMA:DCTINLW Uniprot:Q54W52
Length = 463
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEP--NGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVK 101
Q+ +++GS D+ +R W+V TIP P+ D+ + + + A D+ V+
Sbjct: 300 QFQMLSGSMDSKIRLWDVSTLVANDTIPTPA-----PLTDLDYSMESGLIVTAHKDRIVR 354
Query: 102 CWDLASN-----QSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
WD S+ Q+ + H V + +W + Y C T S D T+K+WD+RT P+ T
Sbjct: 355 IWDPRSSDETKSQTQSLISHKTWVTSVNWNPSSKYHCCST-SHDGTVKYWDIRTKIPLYT 413
Query: 157 INLPER 162
I+ E+
Sbjct: 414 IDTLEK 419
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 131 (51.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P G ++ + +G + W F A D+
Sbjct: 117 TRGEQLVVSGSWDQTVKVWD--PTVGNSLC-TFRGHESVIYSTIWSPHIPGCFASASGDQ 173
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ + + + H + +C W K N ++TG+ D +L+ WDLR QP+
Sbjct: 174 TLRIWDVKTAGVRIVIPAHQTEILSCDWCKY-NENLVVTGAVDCSLRGWDLRNVRQPVFE 232
Query: 157 I 157
+
Sbjct: 233 L 233
Score = 112 (44.5 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVK 101
Q++ IAG + + +G I +S S+ + DV W +D V + C D +++
Sbjct: 33 QHYGIAGC--GTLIILDQNQSGLQIFRSFD-WSDGLFDVTWSEDNEHVLVT-CSGDGSLQ 88
Query: 102 CWDLA-SNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD A + +QV +H V + W + +++GSWD+T+K WD
Sbjct: 89 LWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD 136
Score = 105 (42.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSM-QGMSEPVLDVAWIDD-GTKVFMAGC-DKTV 100
++ L+ S D +++ W+ T P + + ++ V V W G ++ ++G D+TV
Sbjct: 75 EHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTV 132
Query: 101 KCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYT-CLMTGSWDKTLKFWDLRT 150
K WD S+ + H++ + + W +P+ C + S D+TL+ WD++T
Sbjct: 133 KVWDPTVGNSLCTFRGHESVIYSTIW--SPHIPGCFASASGDQTLRIWDVKT 182
Score = 50 (22.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWD 289
YA+ + F P H + LA+ + T FW+
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWN 266
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 131 (51.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 32/121 (26%), Positives = 59/121 (48%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P G ++ + +G + W F A D+
Sbjct: 117 TRGEQLVVSGSWDQTVKVWD--PTVGNSLC-TFRGHESVIYSTIWSPHIPGCFASASGDQ 173
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ + + + H + +C W K N ++TG+ D +L+ WDLR QP+
Sbjct: 174 TLRIWDVKTTGVRIVIPAHQTEILSCDWCKY-NENLVVTGAVDCSLRGWDLRNVRQPVFE 232
Query: 157 I 157
+
Sbjct: 233 L 233
Score = 105 (42.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVK 101
Q++ IAG + + +G I +S ++ + DV W ++ V + C D +++
Sbjct: 33 QHYGIAGC--GTLLVLDQNESGLQIFRSFD-WNDGLFDVTWSENNEHVLVT-CSGDGSLQ 88
Query: 102 CWDLA-SNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
WD A + +QV +H V + W + +++GSWD+T+K WD
Sbjct: 89 LWDTAKATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWD 136
Score = 105 (42.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/112 (25%), Positives = 58/112 (51%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSM-QGMSEPVLDVAWIDD-GTKVFMAGC-DKTV 100
++ L+ S D +++ W+ T P + + ++ V V W G ++ ++G D+TV
Sbjct: 75 EHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTV 132
Query: 101 KCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYT-CLMTGSWDKTLKFWDLRT 150
K WD S+ + H++ + + W +P+ C + S D+TL+ WD++T
Sbjct: 133 KVWDPTVGNSLCTFRGHESVIYSTIW--SPHIPGCFASASGDQTLRIWDVKT 182
Score = 50 (22.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 262 YAVNGIVFHPVHGT-LATVGSEGTFSFWD 289
YA+ + F P H + LA+ + T FW+
Sbjct: 238 YAIRRVKFSPFHASVLASCSYDFTVRFWN 266
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 149 (57.5 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 46/173 (26%), Positives = 82/173 (47%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K FE + D I C+ P TLP ++++ S D ++ W+ E G + + +G S V
Sbjct: 94 KSFEAHA---DYIRCIIVHP-TLP--YILSSSDDMFIKLWDYE-KGWSNTQVFEGHSHYV 146
Query: 80 LDVAWIDDGTKVFM-AGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
+ +AW T F A DKTVK W + S + + H+ + + + L++G
Sbjct: 147 MSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISG 206
Query: 138 SWDKTLKFWDLRTPQPIMTI-----NLPERCYCADVDYPLAVVGTAGRGIVLY 185
+ DK +K WD ++ + T+ N+ CY ++ PL + G+ + L+
Sbjct: 207 ADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPEL--PLILSGSEDGTVKLW 257
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 137 (53.3 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 21 DFEVVSPPED-SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+FE+++ D ++ C +S +LI+G V+ +E PN + K +Q V
Sbjct: 114 NFELINQSHDYAVRCAEWSTDGR---WLISGDGGGMVKYFE--PNLNNV-KIVQAHEMEV 167
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGS 138
DVA+ + +K A D ++K W+ S + +++ H VKT W P+ L +GS
Sbjct: 168 RDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDVKTVDW--HPSKGLLASGS 225
Query: 139 WDKTLKFWDLRTPQPIMTIN 158
D +KFWD RT I T++
Sbjct: 226 KDNLVKFWDPRTGTCIATLH 245
Score = 50 (22.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 264 VNGIVFHPVHGTLATVG-SEGTFSFWDKD 291
VN + +HP++ L T G S+G+ + + D
Sbjct: 295 VNCVTWHPLYPNLLTTGGSDGSVNHYSLD 323
Score = 43 (20.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 269 FHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMD 303
+HP+ L T ++ T FW + +R K S MD
Sbjct: 368 YHPLGHLLCTGSNDKTTRFWSR-SRPDDKES-TMD 400
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 119 (46.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 30/112 (26%), Positives = 55/112 (49%)
Query: 48 IAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDD-GTKVFMAGCDKTVKCWDLA 106
I GS+D + W+ +G+ + +++G V +A+ + G K+ DKT K W
Sbjct: 108 ITGSYDRTCKVWDTA-SGEEL-HTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAE 165
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ + + H A + C P T + TGS D T K WD+++ + ++T+
Sbjct: 166 TGKCYHTFRGHTAEI-VCLSFN-PQSTVVATGSMDTTAKLWDIQSGEEVVTL 215
Score = 103 (41.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+ GS+D + W E GK + +G + ++ +++ T V D T K WD+
Sbjct: 150 IATGSFDKTCKLWSAE-TGKCY-HTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 107 SNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
S + + + H A + + + + + ++TGS+D T+ WD T + + T+
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDR--IITGSFDHTVVVWDASTGRKVHTL 257
Score = 90 (36.7 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 78 PVLDVAWIDDGTKVFMAGC-DKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMT 136
P+ +VA ++ F+ G D+T K WD AS + + + V P + T
Sbjct: 94 PLTNVA-LNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 137 GSWDKTLKFWDLRT 150
GS+DKT K W T
Sbjct: 153 GSFDKTCKLWSAET 166
Score = 67 (28.6 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
++ I F+P L T S+ T WD L+ E I +CA N+ G I
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Score = 40 (19.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 276 LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
+AT ++GT ++ R + E + IS + N G
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQG 357
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 145 (56.1 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 55/209 (26%), Positives = 94/209 (44%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+L+A S D R W V+ N + ++ G S VL ++ D ++ D+T+K WDL
Sbjct: 380 YLLAASNDFASRIWTVDDN--RLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
S + + A +C+ I C+M+G +DK ++FWD+RT + + L R
Sbjct: 438 RS-KVCNIKTVFAG-SSCNDIVCTEQ-CVMSGHFDKKIRFWDIRTESIVKELELLGRITA 494
Query: 166 ADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAG-Y-GL 223
D++ + T R +L ++ + K+T S + +C + + P G Y
Sbjct: 495 LDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGF--KCGSDWTRVVFSPDGNYVAA 552
Query: 224 GSVEGRVAIQYVNPANPKDNFTFKCHRSN 252
GS +G A+ N K T H S+
Sbjct: 553 GSADG--ALYVWNVLTGKLERTLAKHHSS 579
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DK V WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+AS Q ++ + H V T + + T +++GS D T++ WD R+ P+P+ T++
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSTIRCWDCRSRKPEPVQTLD 150
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 41 TLPQYFLIAGSWDNNVRCWEVEPN-GKTIPKSMQGMSEPVLDVAWIDDGTKVFM-AGCDK 98
T + +++GSWD V+ W+ P G+++ + +G + W F A D+
Sbjct: 122 TRGEQLVVSGSWDQTVKLWD--PTVGRSLC-TFKGHESIIYSTIWSPHIPGCFASASGDQ 178
Query: 99 TVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP-QPIMT 156
T++ WD+ + + V H A + +C W K N L+TG+ D +L+ WDLR QP+
Sbjct: 179 TLRIWDVKTTGVRIVVPAHQAEILSCDWCKY-NENLLVTGAVDCSLRGWDLRNVRQPVFE 237
Query: 157 I 157
+
Sbjct: 238 L 238
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 141 (54.7 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 61 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 116
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 174
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 175 TVKLWDIRKKAAIQT 189
Score = 38 (18.4 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 141 (54.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 62 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 117
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 175
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 176 TVKLWDIRKKAAIQT 190
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 141 (54.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 62 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 117
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 175
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 176 TVKLWDIRKKAAIQT 190
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 141 (54.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 62 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 117
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 175
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 176 TVKLWDIRKKAAIQT 190
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 141 (54.7 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 62 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWSVYGDCDNYA-TLKGHSGAVMELH 117
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 175
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 176 TVKLWDIRKKAAIQT 190
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 131 (51.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 36 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 93
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 94 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 138
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 44/170 (25%), Positives = 73/170 (42%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+ ++ SWD +R W++E G+T + + G VL V+ + ++ A DKTVK W+
Sbjct: 80 YALSASWDRTLRLWDLE-TGETTQRFV-GHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT 137
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQP----------IM 155
+ H+ V + + +++ SWDKT+K WDL I
Sbjct: 138 IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYIS 197
Query: 156 TINL-PERCYCADVDYP-LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
I L P+ CA + ++ + LY LE K + SP +Y
Sbjct: 198 CITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRY 247
Score = 122 (48.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 38 SPSTLPQY--FLIAGSWDNNVRCWEV---EPNGKTIPK-SMQGMSEPVLDVAWIDDGTKV 91
S +T P + L++GS D + W++ E N IPK S +G S V DV DG
Sbjct: 22 SLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGAYA 81
Query: 92 FMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A D+T++ WDL + ++ Q H V + K N +++ S DKT+K W+
Sbjct: 82 LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK--NLRQIVSASRDKTVKVWN 136
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
++ I P A+ G +G WD + L EA
Sbjct: 196 ISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEA 233
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 288 WDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWS 327
WDK +K + D S++ + H G I +S D S
Sbjct: 171 WDKT----VKSWDLADYSVNADFIGHTGYISCITLSPDGS 206
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 139 (54.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 44/170 (25%), Positives = 73/170 (42%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+ ++ SWD +R W++E G+T + + G VL V+ + ++ A DKTVK W+
Sbjct: 80 YALSASWDRTLRLWDLE-TGETTQRFV-GHKGDVLSVSIAKNLRQIVSASRDKTVKVWNT 137
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQP----------IM 155
+ H+ V + + +++ SWDKT+K WDL I
Sbjct: 138 IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYIS 197
Query: 156 TINL-PERCYCADVDYP-LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
I L P+ CA + ++ + LY LE K + SP +Y
Sbjct: 198 CITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEVHALAFSPNRY 247
Score = 122 (48.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 38 SPSTLPQY--FLIAGSWDNNVRCWEV---EPNGKTIPK-SMQGMSEPVLDVAWIDDGTKV 91
S +T P + L++GS D + W++ E N IPK S +G S V DV DG
Sbjct: 22 SLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDVTISADGAYA 81
Query: 92 FMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
A D+T++ WDL + ++ Q H V + K N +++ S DKT+K W+
Sbjct: 82 LSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAK--NLRQIVSASRDKTVKVWN 136
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
++ I P A+ G +G WD + L EA
Sbjct: 196 ISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEA 233
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 288 WDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWS 327
WDK +K + D S++ + H G I +S D S
Sbjct: 171 WDKT----VKSWDLADYSVNADFIGHTGYISCITLSPDGS 206
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 133 (51.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ G T + + G + VL VA+ D ++ A D+T+K W+
Sbjct: 89 FALSGSWDGELRLWDLS-TGVTTRRFV-GHDKDVLSVAFSVDNRQIVSASRDRTIKLWNT 146
Query: 106 ASNQSMQVAQHDAPVKTCH--WIK----APN--YTCLMTGSWDKTLKFWDL 148
+ D H W+ +PN +++GSWD+T+K W+L
Sbjct: 147 LGECKYTIGG-DLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNL 196
Score = 131 (51.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 38/145 (26%), Positives = 70/145 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC+ FSP+T Q +++GSWD V+ W + N K + +++G V VA DG+
Sbjct: 168 VSCVRFSPNTF-QPTIVSGSWDRTVKVWNLT-NCK-LRCNLEGHGGYVNAVAVSPDGSLC 224
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
G D WDLA + + + + + + +PN L + D ++K WDL +
Sbjct: 225 ASGGKDGVTLLWDLAEGKRLYSLDAGSIIHSLCF--SPNRYWLCAATQD-SIKIWDLESK 281
Query: 152 ------QPIMTINLPERCYCADVDY 170
+P + ++ + YC +++
Sbjct: 282 HIVQDLKPEIPVSKNQMLYCTSLNW 306
Score = 45 (20.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 18/67 (26%), Positives = 26/67 (38%)
Query: 243 NFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAM 302
N +C+ G GG Y VN + P A+ G +G WD +L +A
Sbjct: 198 NCKLRCNLE--GHGG----Y-VNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSLDAG 250
Query: 303 DMSISTC 309
+ S C
Sbjct: 251 SIIHSLC 257
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 145 (56.1 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F +GS D N++ W++ G + +G + V + + DG + G D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCI--HTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 172
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ + + + H+ +++ + P+ L TGS DKT+KFWDL T
Sbjct: 173 TAGKLLHEFKSHEGKIQSLDF--HPHEFLLATGSADKTVKFWDLET 216
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 140 (54.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 62 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 117
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 118 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 175
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R + T
Sbjct: 176 TVKLWDIRKKAAVQT 190
Score = 38 (18.4 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 192 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 222
>CGD|CAL0005343 [details] [associations]
symbol:DOA1 species:5476 "Candida albicans" [GO:0004620
"phospholipase activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 69/259 (26%), Positives = 106/259 (40%)
Query: 51 SWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQS 110
S D +R W +GK+ K G S+ + + ++ G + D T+K WDL + ++
Sbjct: 155 SADKTIRFW----HGKSEVKQFVGHSDVIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKN 210
Query: 111 MQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERCYCADV 168
+Q H++ V I N + TG D+T++ WDL T + I LP +C
Sbjct: 211 LQTFYGHESFVYDLALIA--NGKFVSTGE-DRTVRIWDLATGNVLQVITLPCISVWCVTA 267
Query: 169 DYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY----QNRCIA--IFRDKKKQPA-GY 221
P G ++ P++ E LK+ Q+ IA D KK GY
Sbjct: 268 -LPNGDFAVGGSDNLVRVFTAHPEKVAPEEELLKFKEAVQSSSIAEQSLDDLKKTDIPGY 326
Query: 222 GLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATV-G 280
S G+ + NP DN T + H+ +GG + + + +V G T G
Sbjct: 327 EALSQPGKQEGSTIMVKNP-DNGTIEAHQWSGG-----EWHKIGDVVGSSSSGKKQTYQG 380
Query: 281 SEGTFSF-WD-KDARTKLK 297
E F F D KD LK
Sbjct: 381 KEYDFVFDVDIKDGEPPLK 399
>UNIPROTKB|Q5APD6 [details] [associations]
symbol:DOA1 "Putative uncharacterized protein DOA1"
species:237561 "Candida albicans SC5314" [GO:0004620 "phospholipase
activity" evidence=IMP] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005343 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004620 GO:GO:0006511
EMBL:AACQ01000001 EMBL:AACQ01000002 GO:GO:0044182 GO:GO:1900429
HOGENOM:HOG000174247 KO:K14018 InterPro:IPR015155
InterPro:IPR013535 Pfam:PF09070 Pfam:PF08324 PROSITE:PS51394
PROSITE:PS51396 RefSeq:XP_723325.1 RefSeq:XP_723515.1
ProteinModelPortal:Q5APD6 STRING:Q5APD6 GeneID:3634871
GeneID:3635107 KEGG:cal:CaO19.12292 KEGG:cal:CaO19.4829
Uniprot:Q5APD6
Length = 761
Score = 144 (55.7 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 69/259 (26%), Positives = 106/259 (40%)
Query: 51 SWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQS 110
S D +R W +GK+ K G S+ + + ++ G + D T+K WDL + ++
Sbjct: 155 SADKTIRFW----HGKSEVKQFVGHSDVIRKLLILEGGEQFLSCSNDGTIKLWDLQTGKN 210
Query: 111 MQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERCYCADV 168
+Q H++ V I N + TG D+T++ WDL T + I LP +C
Sbjct: 211 LQTFYGHESFVYDLALIA--NGKFVSTGE-DRTVRIWDLATGNVLQVITLPCISVWCVTA 267
Query: 169 DYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY----QNRCIA--IFRDKKKQPA-GY 221
P G ++ P++ E LK+ Q+ IA D KK GY
Sbjct: 268 -LPNGDFAVGGSDNLVRVFTAHPEKVAPEEELLKFKEAVQSSSIAEQSLDDLKKTDIPGY 326
Query: 222 GLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATV-G 280
S G+ + NP DN T + H+ +GG + + + +V G T G
Sbjct: 327 EALSQPGKQEGSTIMVKNP-DNGTIEAHQWSGG-----EWHKIGDVVGSSSSGKKQTYQG 380
Query: 281 SEGTFSF-WD-KDARTKLK 297
E F F D KD LK
Sbjct: 381 KEYDFVFDVDIKDGEPPLK 399
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 138 (53.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 55/206 (26%), Positives = 90/206 (43%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D I +A PS P +++ S D ++ W + N K + ++ +G V+ V +
Sbjct: 98 DYIRSIAVHPSK-P--YILTSSDDLTIKLWNWDHNWK-LEQTFEGHQHYVMSVNFNPKDP 153
Query: 90 KVFMAGC-DKTVKCWDLASNQ-SMQVAQHDAP-VKTCHWIKAPNYTCLMTGSWDKTLKFW 146
F + C D+TVK W L S+Q + + H+A V + + L+T S DKT+K W
Sbjct: 154 NTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKPYLITSSDDKTIKVW 213
Query: 147 DLRTPQPIMTI--NLPERCYCA-DVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
D +T + T+ +L + + P+ V G+ G + + FK E + Y
Sbjct: 214 DYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSED-GTIRFW---NSNTFK-LEKSINY 268
Query: 204 Q-NR--CIAIFRDKKKQPAGYGLGSV 226
R CI I AG+ G V
Sbjct: 269 SLERAWCIGILPKSNVIAAGFDSGFV 294
Score = 52 (23.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 274 GTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
G+L V SEG SF+D + KL +D I + NG++ A
Sbjct: 439 GSLLGVKSEGCISFYDWE-HGKLVRRVDLDDDIIDVIWSDNGELLA 483
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 129 (50.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 34/125 (27%), Positives = 61/125 (48%)
Query: 33 SCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVF 92
SC FSP + + S D+++R W+V K + ++G V V++ D ++
Sbjct: 73 SC-CFSPDGR---LIASSSSDHSIRLWDVA-RSKCL-HVLKGHQRSVETVSFSPDSKQLA 126
Query: 93 MAGCDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
G DK W++ S + + + H +++ + +P L TGSWD T+ WDLR
Sbjct: 127 SGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDF--SPTSDSLATGSWDSTVHIWDLRAS 184
Query: 152 QPIMT 156
P+++
Sbjct: 185 TPVVS 189
Score = 120 (47.3 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
++C AFSP L+ S D V W + +G+ + + + G PV + DG +
Sbjct: 29 VNCSAFSPDGRT---LLTASDDGCVYVWGTK-SGRLLWR-LAGHRGPVKSCCFSPDGRLI 83
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ D +++ WD+A ++ + V + H V+T + +P+ L +G WDK W++++
Sbjct: 84 ASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSF--SPDSKQLASGGWDKRAIVWEVQS 141
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 32/109 (29%), Positives = 55/109 (50%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+ISC+ +S S L L +GSWD + W+ P +P ++G + V +A+ D K
Sbjct: 199 NISCLCYSASGL----LASGSWDKTICVWK--PTTNNLPLQLKGHTIWVNSLAFSPDELK 252
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQHDAPVK-TCHWIKAPNYTCLMTGS 138
+ AG +TVK WD + + ++ + V C I P+ L++G+
Sbjct: 253 LASAGYSRTVKVWDCLTGKCLETLKGMLDVAHAC--IFTPDGKLLVSGA 299
Score = 110 (43.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K V+ + S+ ++FSP + L +G WD WEV+ +G+ + + G + +
Sbjct: 101 KCLHVLKGHQRSVETVSFSPDSKQ---LASGGWDKRAIVWEVQ-SGRRV-HLLVGHCDSI 155
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTC---LMT 136
+ + D TV WDL ++ + V+ H+ T + I Y+ L +
Sbjct: 156 QSSDFSPTSDSLATGSWDSTVHIWDLRASTPV-VSYHNLEGHTGN-ISCLCYSASGLLAS 213
Query: 137 GSWDKTLKFW 146
GSWDKT+ W
Sbjct: 214 GSWDKTICVW 223
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
VN + F P LA+ G T WD
Sbjct: 241 VNSLAFSPDELKLASAGYSRTVKVWD 266
Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 269 FHPVHGTLATVGSEGTFSFWDKDART 294
F P +LAT + T WD A T
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRAST 185
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 145 (56.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 50/179 (27%), Positives = 81/179 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + C+A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 194 KLYRVISGHLGWVRCIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 248
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
V +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 249 RGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYGLDLHPTLDVLVTCS 306
Query: 139 WDKTLKFWDLRTPQPIMTIN------LPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T++ RC A+ P + G+ I L+ L GK
Sbjct: 307 RDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAE---PQIITGSHDTTIRLWDLVAGK 362
Score = 37 (18.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 256 GGVQDIYAVNGIVFH-PVH--GTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALN 312
G +Q++ N I+ V+ G L + GT WD RT + + ++ +L+
Sbjct: 403 GFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDW--RTGYN-FQRVHAAVQPGSLD 459
Query: 313 HNGQIFAYA 321
IFA A
Sbjct: 460 SESGIFACA 468
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D +SC+ FSP+TL Q +++ SWD V+ W + N K + ++ G + V VA DG+
Sbjct: 151 DWVSCVRFSPNTL-QPTIVSASWDKTVKVWNLS-NCK-LRSTLAGHTGYVSTVAVSPDGS 207
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
G D V WDLA + + + ++ + + +PN L + + +K WDL
Sbjct: 208 LCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCF--SPNRYWLCAAT-EHGIKIWDLE 264
Query: 150 TPQPI--MTINLPERCYCADVDYPLA 173
+ + + ++L AD P A
Sbjct: 265 SKSIVEDLKVDLKAEAEKADNSGPAA 290
Score = 133 (51.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ A D+T+K W+
Sbjct: 77 FALSGSWDGELRLWDLAAGVST--RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 134
Query: 106 ASNQSMQVAQHDAPVKTCHWIK----APN--YTCLMTGSWDKTLKFWDL 148
+++ + W+ +PN +++ SWDKT+K W+L
Sbjct: 135 LGECKYTISEGGEGHRD--WVSCVRFSPNTLQPTIVSASWDKTVKVWNL 181
Score = 42 (19.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
V+ + P A+ G +G WD KL EA + + C
Sbjct: 197 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC 242
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 52/198 (26%), Positives = 94/198 (47%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCD-KTVKCWDL 105
L+AG V+ +++ ++I +++ PV + F++G D KTVK WDL
Sbjct: 96 LLAGDATGLVQIFDLST--RSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDL 153
Query: 106 ASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQP-IMTINLPERC 163
++ ++ H+ V+T W+ A T L++G +D T++ WD R P +M+ + E
Sbjct: 154 STGAVQYDLSGHEDYVRTASWMSA---TRLVSGGYDGTIRLWDTRIADPEVMSFSHGE-- 208
Query: 164 YCADVDYPL----AVVGTAGRGIVLYQL-EGKPQEFKKTESPLKYQNRCIAIFRDKKKQP 218
DV P+ V+ G I ++ L G+ KK + K C+A+ + +
Sbjct: 209 -AIDVVLPMQSGSTVISAGGPSIKVWDLVAGRQTPTKKLSNHQK-SITCLAMNSENTRLL 266
Query: 219 AGYGLGSVEGRVAIQYVN 236
+G GL +G V I ++
Sbjct: 267 SG-GL---DGHVKIYNIS 280
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 141 (54.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + +++G S V+++
Sbjct: 61 LLSGHEGEVYCCKFHPNGST---LASAGFDRLILLWNVYGDCDNYA-TLKGHSGAVMELH 116
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS D
Sbjct: 117 YNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSDDG 174
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R I T
Sbjct: 175 TVKLWDIRKKAAIQT 189
Score = 38 (18.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 191 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 221
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 49/177 (27%), Positives = 80/177 (45%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + V+S + +A P Q+F + GS D ++ W++ +GK + S+ G V
Sbjct: 199 KLYRVISGHLGWVRSIAVEPGN--QWF-VTGSADRTIKIWDLA-SGK-LKLSLTGHISTV 253
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PNYTCLMTGS 138
VA + +F G DK VKCWDL N+ ++ + + + + P L+T S
Sbjct: 254 RGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIR--HYHGHLSAVYDLDLHPTIDVLVTCS 311
Query: 139 WDKTLKFWDLRTPQPIMTI----NLPERCYCADVDYPLAVVGTAGRGIVLYQL-EGK 190
D T + WD+RT + T+ N C + + VG+ I L+ L GK
Sbjct: 312 RDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGK 368
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/126 (31%), Positives = 61/126 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV--LDVAWIDDGT 89
+SC F S ++ GS D+ W+VE +G+ I ++ G + V +DV D G
Sbjct: 159 MSCCTFLRS---DNLILTGSGDSTCAIWDVE-SGQLI-QNFHGHTGDVFAIDVPKCDTGN 213
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
AG DK WD+ S Q +Q + H+A + T + PN TGS D T + +DL
Sbjct: 214 TFISAGADKHSLVWDIRSGQCVQSFEGHEADINTVRF--HPNGDAFATGSDDATCRLFDL 271
Query: 149 RTPQPI 154
R + +
Sbjct: 272 RADRQV 277
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 136 (52.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
++S E + C F P+ L + +D + W V + + +++G S V+++
Sbjct: 51 LLSGHEGEVYCCKFHPNGAT---LASSGYDRLILMWNVYGDCENYA-TLKGHSGAVMELH 106
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSWDK 141
+ DG+ +F A DKTV WD + + ++ + H + V +C + P C TGS D
Sbjct: 107 YNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLAC--TGSDDG 164
Query: 142 TLKFWDLRTPQPIMT 156
T+K WD+R + T
Sbjct: 165 TVKLWDIRKKASVHT 179
Score = 40 (19.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 10/57 (17%), Positives = 23/57 (40%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
Q+ Y V + F+ + + G + WD + + S++ +L+ +G
Sbjct: 181 QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADG 237
>TAIR|locus:2180952 [details] [associations]
symbol:AT5G15550 "AT5G15550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 EMBL:AL391143
HSSP:P16649 GO:GO:0080008 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:DCTINLW EMBL:AY064011 EMBL:AY091257
IPI:IPI00525355 PIR:T51533 RefSeq:NP_197059.1 UniGene:At.27103
ProteinModelPortal:Q9LF27 SMR:Q9LF27 STRING:Q9LF27 PaxDb:Q9LF27
PRIDE:Q9LF27 EnsemblPlants:AT5G15550.1 GeneID:831408
KEGG:ath:AT5G15550 TAIR:At5g15550 InParanoid:Q9LF27
PhylomeDB:Q9LF27 ProtClustDB:CLSN2687473 ArrayExpress:Q9LF27
Genevestigator:Q9LF27 Uniprot:Q9LF27
Length = 433
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/121 (28%), Positives = 60/121 (49%)
Query: 43 PQYFLI-AGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVK 101
P++ +I + SWD++VR W+VE GK G + +DV + + G D ++
Sbjct: 281 PEHDVIYSSSWDHSVRRWDVE-TGKDSLNLFCGKALNTVDVGG-ESSALIAAGGSDPILR 338
Query: 102 CWDL----ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
WD S Q + H + + C W K+ ++ L++ S+D + WDLRT P+ I
Sbjct: 339 VWDPRKPGTSAPVFQFSSHSSWISACKWHKS-SWFHLLSASYDGKIMLWDLRTAWPLSVI 397
Query: 158 N 158
+
Sbjct: 398 D 398
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 39/139 (28%), Positives = 74/139 (53%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
E+ ++ +A SP+ F+ GS D +R W V +G T+ + ++G E V +A+ D
Sbjct: 443 ENGVTAIAISPN---DQFIAVGSLDQIIRVWSV--SG-TLVERLEGHKESVYSIAFSPDS 496
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVA--QHDAPVK---TCHW------IKAPNYTCLMTG 137
+ + DKT+K W+L + +S+ ++ + + K T H +P+ ++G
Sbjct: 497 SILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSG 556
Query: 138 SWDKTLKFWDLRTPQPIMT 156
S D++++FWDL+T Q +T
Sbjct: 557 SKDRSMQFWDLQTGQSYLT 575
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 121 (47.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D++ C+ FSPS + + +GS D V W G++ + + V V + DG
Sbjct: 62 KDAVMCVQFSPSG---HLVASGSRDKTVCLWVPSVKGESTV--FKAHTATVRSVHFSSDG 116
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A DKT+K W + + + ++QH V+ + +P+ + + S DKT+K WD
Sbjct: 117 QSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARF--SPDGRLIASASDDKTVKLWD 174
Score = 121 (47.7 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEP---VLDVAWIDDG 88
+ C FSP + + S D V+ W+ KT + + E V + G
Sbjct: 149 VRCARFSPDGR---LIASASDDKTVKLWD-----KTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
T + AG DKTVK WD+ N+ +Q Q H A V + + + NY L+T S D TLK D
Sbjct: 201 TCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNY--LITASNDSTLKILD 258
Query: 148 LRTPQPIMTIN 158
L + + T++
Sbjct: 259 LLEGRLLYTLH 269
Score = 108 (43.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D+I+ + FS L + L +GS D+ ++ W ++P + + G + V+ V + G
Sbjct: 21 DAITSVDFS---LNKKQLASGSMDSCLKIWSMKPQMRAY--CLVGHKDAVMCVQFSPSGH 75
Query: 90 KVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
V DKTV W +S H A V++ H+ + + L+T S DKT+K W +
Sbjct: 76 LVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHF--SSDGQSLVTASDDKTIKVWTV 133
Query: 149 RTPQPIMTIN 158
+ + +++
Sbjct: 134 HRQKFLFSLS 143
Score = 55 (24.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 265 NGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNG 315
N + FHP +A G++ T WD L+ + ++++ + + +G
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSG 242
Score = 52 (23.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC-ALNHNGQIFA 319
AVN + FHP L T ++ T D +L + +TC A + G FA
Sbjct: 232 AVNSLSFHPSGNYLITASNDSTLKILDL-LEGRLLYTLHGHQGPATCVAFSRTGDFFA 288
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DK V WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+AS Q ++ + H V T + + T +++GS D +++ WD R+ P+P+ T++
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSSIRCWDCRSRRPEPVQTLD 150
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DK V WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+AS Q ++ + H V T + + T +++GS D +++ WD R+ P+P+ T++
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSSIRCWDCRSRRPEPVQTLD 150
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DKTV WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+A+ Q ++ + H V T + + T +++GS D +++ WD R+ P+P+ T++
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSSVRCWDCRSRKPEPVQTLD 150
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 36/117 (30%), Positives = 61/117 (52%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DKTV WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+A+ Q ++ + H V T + + T +++GS D +++ WD R+ P+P+ T++
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSSVRCWDCRSRKPEPVQTLD 150
>MGI|MGI:1929514 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0030838
"positive regulation of actin filament polymerization"
evidence=IMP] [GO:0031931 "TORC1 complex" evidence=ISO] [GO:0031932
"TORC2 complex" evidence=ISO] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=ISO] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IMP] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=ISO] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1929514 GO:GO:0005829 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0031931 GO:GO:0031932 KO:K08266 GO:GO:0032008
CTD:64223 GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AF237676
EMBL:AK002751 EMBL:AK038515 EMBL:AK040100 EMBL:AK048102
EMBL:AK077680 EMBL:AK083731 EMBL:BC015279 IPI:IPI00458055
RefSeq:NP_001239392.1 RefSeq:NP_001239393.1 RefSeq:NP_001239394.1
RefSeq:NP_064372.2 UniGene:Mm.289516 ProteinModelPortal:Q9DCJ1
SMR:Q9DCJ1 IntAct:Q9DCJ1 STRING:Q9DCJ1 PhosphoSite:Q9DCJ1
PaxDb:Q9DCJ1 PRIDE:Q9DCJ1 Ensembl:ENSMUST00000070888
Ensembl:ENSMUST00000179163 GeneID:56716 KEGG:mmu:56716
UCSC:uc008awg.2 InParanoid:Q9DCJ1 NextBio:313187 Bgee:Q9DCJ1
Genevestigator:Q9DCJ1 Uniprot:Q9DCJ1
Length = 326
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/154 (27%), Positives = 70/154 (45%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P +IA + ++R +++ N S G+S+ + V + +DG ++ G D T +
Sbjct: 52 PDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARI 111
Query: 103 WDLASN--QSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
WDL S Q ++ Q +AP+ C + PN L+ G + WDL+T I P
Sbjct: 112 WDLRSRNLQCQRIFQVNAPIN-CVCLH-PNQAELIVGDQSGAIHIWDLKTDHNEQLIPEP 169
Query: 161 ERCYCA-----DVDYPLAVVGTAGRGIVLYQLEG 189
E + D Y +A V +AG V + L G
Sbjct: 170 ESSITSAHIDPDASY-MAAVNSAGNCYV-WNLTG 201
>RGD|69242 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0030838 "positive regulation
of actin filament polymerization" evidence=IEA;ISO] [GO:0032008
"positive regulation of TOR signaling cascade" evidence=IEA;ISO]
[GO:0032314 "regulation of Rac GTPase activity" evidence=IEA;ISO]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=ISO] [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AF051155 RGD:69242 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0050731 GO:GO:0030838 GO:GO:0032314 KO:K08266 GO:GO:0032008
CTD:64223 HOGENOM:HOG000208395 HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3
EMBL:BC097319 IPI:IPI00209970 RefSeq:NP_071799.2 UniGene:Rn.9444
ProteinModelPortal:Q9Z2K5 STRING:Q9Z2K5 PhosphoSite:Q9Z2K5
GeneID:64226 KEGG:rno:64226 UCSC:RGD:69242 InParanoid:Q9Z2K5
NextBio:612918 Genevestigator:Q9Z2K5 Uniprot:Q9Z2K5
Length = 326
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 44/154 (28%), Positives = 70/154 (45%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P +IA + ++R +++ N S G+S+ + V + +DG ++ G D T +
Sbjct: 52 PDRSMIAATGYQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARI 111
Query: 103 WDLASN--QSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
WDL S Q ++ Q +AP+ C + PN L+ G T WDL+T I P
Sbjct: 112 WDLRSRNLQCQRIFQVNAPIN-CVCLH-PNQAELIVGDQSGTSHIWDLKTDHNEQLIPEP 169
Query: 161 ERCYCA-----DVDYPLAVVGTAGRGIVLYQLEG 189
E + D Y +A V +AG V + L G
Sbjct: 170 EFSITSAHIDPDASY-MAAVNSAGNCFV-WNLTG 201
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+AFSP L +GS+D V W+V G+ + +S+ S+PV + + DGT V
Sbjct: 309 VYCLAFSPKG---NILASGSYDEAVFLWDVRA-GRLM-RSLPAHSDPVSGIDFCRDGTLV 363
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQH-DAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
D ++ WD A+ Q ++ H D P T + +PN ++ + D ++ WD
Sbjct: 364 VSCSTDGLIRIWDTATGQCLRTLVHEDNPAVT-NVCFSPNGRYILAFNLDSCIRLWD 419
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 140 (54.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DKTVKCWDL 105
+ +GS D VR W++E NG + ++ + + V VA I TK AG DK+V+ WDL
Sbjct: 403 IASGSGDRTVRLWDIE-NGTAL--TVFTIEDGVTTVA-ISPDTKYVAAGSLDKSVRVWDL 458
Query: 106 ASNQSMQVAQH-DAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQ 152
++ + D + + + +PN L+TGS DKT+K W+L TP+
Sbjct: 459 TQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPR 507
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/135 (30%), Positives = 67/135 (49%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPK--SMQGMSEPVLDVAWID 86
ED ++ +A SP T ++ AGS D +VR W++ G + + G + V VA+
Sbjct: 429 EDGVTTVAISPDTK---YVAAGSLDKSVRVWDLT-QGCPVERLEGPDGHKDSVYSVAFSP 484
Query: 87 DGTKVFMAGCDKTVKCWDLAS---NQSMQVAQHDAPVKTCHWIK--------APNYTCLM 135
+G + DKT+K W+LA+ N Q ++ VKT + P+ +M
Sbjct: 485 NGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVM 544
Query: 136 TGSWDKTLKFWDLRT 150
+GS D+ ++FWD RT
Sbjct: 545 SGSKDRGVQFWDPRT 559
Score = 125 (49.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 32/130 (24%), Positives = 60/130 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I + FSP +L G+ D +R W++ +TI G + + + + DG +
Sbjct: 349 IRSVCFSPDGK---YLATGAEDKQIRVWDITT--RTIRIQFAGHEQDIYSLDFARDGRTI 403
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
D+TV+ WD+ + ++ V + V T +P+ + GS DK+++ WDL
Sbjct: 404 ASGSGDRTVRLWDIENGTALTVFTIEDGVTTV--AISPDTKYVAAGSLDKSVRVWDLTQG 461
Query: 152 QPIMTINLPE 161
P+ + P+
Sbjct: 462 CPVERLEGPD 471
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 135 (52.6 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/117 (30%), Positives = 60/117 (51%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
Y L GS D ++ W P T+ ++ G VLD A D + + G DK V WD
Sbjct: 39 YCLTCGS-DKTLKLWN--PLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT--PQPIMTIN 158
+AS Q ++ + H V T + + T +++GS D +++ WD R+ P+P+ T++
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQFNEEA--TVILSGSIDSSVRCWDCRSRKPEPVQTLD 150
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DKTVKCWD 104
FL AG +D N++ W+ E G+ I G V+ + DD + +AG DK + WD
Sbjct: 341 FLTAG-YDKNIKYWDTE-TGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398
Query: 105 LASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERC 163
+ + + + + QH V T ++ N +T S DK+L+ W+ P I I+ P
Sbjct: 399 INTGEVTQEYDQHLGAVNTITFVD--NNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMH 456
Query: 164 YCADVD-YP----LAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKK-Q 217
+ +P LA + I++Y + Q KK ++ +A + +
Sbjct: 457 SMPSISVHPNGNWLAAQSLDNQ-ILIYSTRERFQLNKKK----RFAGHIVAGYACQVNFS 511
Query: 218 PAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGT-L 276
P G + S +G + + + K T KCH NG G + +HP+ + +
Sbjct: 512 PDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCH--NGVCIGAE---------WHPLEQSKV 560
Query: 277 ATVGSEGTFSFWD 289
AT G +G +WD
Sbjct: 561 ATCGWDGLIKYWD 573
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 35/123 (28%), Positives = 62/123 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+S + F P + L++ D V+ W+V +GK + ++ G ++ V D+ + +DG+K
Sbjct: 285 VSAIRFFPKQ--GHLLLSAGMDCKVKIWDVYNSGKCM-RTYMGHAKAVRDICFSNDGSKF 341
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKA-PN---YTCLMTGSWDKTLKFWD 147
AG DK +K WD ++ QV + K + +K P+ L+ G DK + WD
Sbjct: 342 LTAGYDKNIKYWD---TETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 398
Query: 148 LRT 150
+ T
Sbjct: 399 INT 401
>SGD|S000003105 [details] [associations]
symbol:SEC27 "Essential beta'-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IMP;IPI] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0030126 "COPI vesicle coat" evidence=IGI;ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IMP] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000003105 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:BK006941
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 GO:GO:0043130
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG OrthoDB:EOG48H0BF
GO:GO:0032511 EMBL:U11237 EMBL:X92670 EMBL:Z72659 PIR:B55123
RefSeq:NP_011378.1 PDB:2YNN PDB:2YNO PDB:2YNP PDBsum:2YNN
PDBsum:2YNO PDBsum:2YNP ProteinModelPortal:P41811 SMR:P41811
DIP:DIP-6468N IntAct:P41811 MINT:MINT-428887 STRING:P41811
PaxDb:P41811 PeptideAtlas:P41811 EnsemblFungi:YGL137W GeneID:852740
KEGG:sce:YGL137W CYGD:YGL137w NextBio:972153 Genevestigator:P41811
GermOnline:YGL137W Uniprot:P41811
Length = 889
Score = 135 (52.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 43/141 (30%), Positives = 68/141 (48%)
Query: 21 DFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL 80
DFE P D I +A P T P ++++GS D V+ W E N + ++ +G V+
Sbjct: 92 DFEA-HP--DYIRSIAVHP-TKP--YVLSGSDDLTVKLWNWE-NNWALEQTFEGHEHFVM 144
Query: 81 DVAWIDDGTKVFMAGC-DKTVKCWDLAS---NQSMQVAQHDAPVKTCHWIKAPNYTCLMT 136
VA+ F +GC D+TVK W L N ++ Q + V + P+ ++T
Sbjct: 145 CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMIT 203
Query: 137 GSWDKTLKFWDLRTPQPIMTI 157
S D T+K WD +T + T+
Sbjct: 204 ASDDLTIKIWDYQTKSCVATL 224
Score = 51 (23.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNH 313
V+ VFHP + + +GT W+ K++ + + + S C H
Sbjct: 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTY-KVEKTLNVGLERSWCIATH 279
Score = 39 (18.8 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 274 GTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQI 317
G L V S+G F+D D T ++ +D++ + NG++
Sbjct: 442 GALLGVKSDGFVYFFDWDNGTLVR---RIDVNAKDVIWSDNGEL 482
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D I +A P+ Q F++ S D ++ W+ E K + + +G S V+ +A T
Sbjct: 98 DYIRSIAVHPT---QPFVLTASDDMTIKLWDWEKGWKCV-QVYEGHSHYVMGLAINPKDT 153
Query: 90 KVFMAGC-DKTVKCWDLAS-NQSMQVAQHDAP-VKTCHWIKAPNYTCLMTGSWDKTLKFW 146
F + C D+TVK W L S + + + H+ V + + L+T S DKT+K W
Sbjct: 154 NTFASACLDRTVKIWSLGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTTSDDKTVKVW 213
Query: 147 DLRTPQPIMTI-----NLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPL 201
D T I T+ N+ CY ++ P+ + G+ I ++ + E L
Sbjct: 214 DYTTKALIATLEGHTSNVSFACYHPEL--PVIISGSEDGTIKIWHANTY-----RLEQSL 266
Query: 202 KYQ-NRCIAIFRDKKKQPAGYGLGSVEGRVAIQ 233
Y R + + KQ G LG +G V ++
Sbjct: 267 SYGLERAWCVSYQRGKQ--GVALGFDDGAVVVK 297
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 137 (53.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 24 VVSPPEDSISCMAFSP--STLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLD 81
++S E + C F P +TL AG +D + W V + +++G S V++
Sbjct: 88 LLSGHEGEVYCCKFHPWGNTLAS----AG-FDRLILLWNVYGDCDNYA-TLKGHSGAVME 141
Query: 82 VAWIDDGTKVFMAGCDKTVKCWDLASNQSMQ-VAQHDAPVKTCHWIK-APNYTCLMTGSW 139
+ + DG+ +F A DKTV WD + + ++ + H + V +C+ + P C TGS
Sbjct: 142 LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVC--TGSD 199
Query: 140 DKTLKFWDLRTPQPIMT 156
D T+K WD+R + T
Sbjct: 200 DGTVKLWDIRKKAAVQT 216
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 259 QDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
Q+ Y V + F+ + + G + WD
Sbjct: 218 QNTYQVLAVTFNDTSDQIISGGIDNDIKVWD 248
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 139 (54.0 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F+ +GS D +++ W+V G I K + ++ V + + DG + A D TVK WDL
Sbjct: 119 FVASGSLDTDIKLWDVRRKG-CIFK-YKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN---LPE 161
+ + M + H PV + P+ L +GS D+T++FWDL + I P
Sbjct: 177 TAGKVMFEFTGHSGPVNVVEF--HPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPV 234
Query: 162 RCYCADVD 169
RC + D
Sbjct: 235 RCILFNPD 242
>UNIPROTKB|I3LLQ2 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000024996 Uniprot:I3LLQ2
Length = 354
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL--DVAWIDDGT 89
+S +F+ S + Q ++ S D W+VE +G+ + +S G VL D+A + G
Sbjct: 156 LSACSFTNSDMQQ--ILTASGDGTCALWDVE-SGQLL-QSFHGHGADVLCLDLAPSETGN 211
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
GCDK WD+ S Q +Q + H++ + + + P+ +GS D T + +DL
Sbjct: 212 TFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYY--PSGDAFASGSDDATCRLYDL 269
Query: 149 RTPQPIMTINLPERCYCAD-VDYPLA 173
R + + + + A VD+ L+
Sbjct: 270 RADREVAIYSKESIIFGASSVDFSLS 295
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/169 (25%), Positives = 82/169 (48%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
+SIS + + +T L+ GSWD+ ++ W+++ G K+ ++ + D ++
Sbjct: 252 ESISAVQWMDATT----LVTGSWDHTLKVWDLQLEGI---KTEISTNKSIFDASYSKLNR 304
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ----HDAPVKTCHWIKAPNYTCLMTGSWDKTLKF 145
+ A DK ++ +D +NQ V H+A V+T W + ++GS+D K
Sbjct: 305 LIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFL-FVSGSYDTQNKL 363
Query: 146 WDLRTPQ-PIMTINLPERCYCADVDY--PLAVV-GTAGRGIVLYQLEGK 190
WD R+P+ P+ + L D+D+ P +V G A + +++ GK
Sbjct: 364 WDCRSPKAPLYDL-LGHGEKVLDIDWSNPKYIVSGGADNTVRVFK-SGK 410
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 102 (41.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
ED I+C F P + Q + + S D+ V W +P + P G V V + DG
Sbjct: 47 EDIITCADFDPK-MRQ--VASCSKDSIVYVWNFKPQQR--PFKFVGHKGAVYCVKYSPDG 101
Query: 89 TKVFMAGCDKTVKCW-DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ G D+ ++ W + ++ + H +++ + Y L++ S DKTLK W
Sbjct: 102 ETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGY--LLSSSDDKTLKLWR 159
Query: 148 LR 149
L+
Sbjct: 160 LQ 161
Score = 97 (39.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGK-TIPKSMQGMSEPVLDVAWIDDGT 89
++ C+ +SP + G D +R W+ K +I K+ G + +++ DG
Sbjct: 91 AVYCVKYSPDG--ETIASCGQ-DRQIRLWQNTVQSKCSIIKAHCGA---IRSMSFSADGG 144
Query: 90 KVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ + DKT+K W L + M A H V++ + +P+ + +GS DKT+ WDL
Sbjct: 145 YLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRS--GVISPDMRLVASGSDDKTVMLWDL 202
Score = 82 (33.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 22/77 (28%), Positives = 31/77 (40%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
VN I HP LA+ GS+ WD ++ + D I+T N +G FA S
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGS 334
Query: 324 YD----WSKGHEHNNPN 336
+ W + N N
Sbjct: 335 QNLCMVWKTNFDQNIQN 351
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 136 (52.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/123 (30%), Positives = 58/123 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID-DGTK--VFMAGCDKTVKC 102
+++ GS+D R W +E GK + ++ G ++ V DVAW+ DG + A D+TV
Sbjct: 113 WILTGSYDKTARIWSME--GKAV-MTVAGHADVVKDVAWVKRDGLNSVLLTASLDQTVML 169
Query: 103 WDLASNQSMQVAQH--DAPVKTCHWIKA-PNYTCLMTGSWDKTLKFWDLRTPQPIMTINL 159
W+ S ++ A+H + I P T +GSWDK LK W + I
Sbjct: 170 WEWNSERNKVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEE 229
Query: 160 PER 162
P R
Sbjct: 230 PNR 232
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 38/148 (25%), Positives = 68/148 (45%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L + SWD+ +R W+ E G+ KS S+ +++ ++ D+ V+ WD
Sbjct: 270 LCSASWDHTIRLWDAETGGQ---KSTLSGSKVFNCISYSPLCRRLASGSTDRHVRLWDPR 326
Query: 107 SNQS----MQVAQHDAPVKTCHWIKAPNYTC-LMTGSWDKTLKFWDLRTPQ-PIMTINLP 160
S + + H+ V W AP++ L++GS D +K WD R+ + P+ +
Sbjct: 327 SKDGSLVLLSLTSHNGWVTAVRW--APSHEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAH 384
Query: 161 E-RCYCAD-VDYPLAVVGTAGRGIVLYQ 186
E + CAD + L + G A + Y+
Sbjct: 385 EDKVLCADWTENGLILSGGADNKLYTYR 412
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 131 (51.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 33/105 (31%), Positives = 50/105 (47%)
Query: 55 NVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVA 114
+V+ W PN + + V D+AW TK A D T+K +D + V
Sbjct: 136 DVKYWR--PNFNNVETIDDAHHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTARTCDTVL 193
Query: 115 Q-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
H+ VK+C W P L++GS D +KFWD RT + + T++
Sbjct: 194 TGHNWDVKSCDW--HPTKGLLVSGSKDHQVKFWDPRTARCLTTLH 236
Score = 49 (22.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 264 VNGIVFHPVHGTLATVGSE 282
++ + +HPVH +L + GSE
Sbjct: 285 ISTLTWHPVHCSLISTGSE 303
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 236 NPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFS-FWDK 290
+PAN + HR I+ ++ +HP+ LA+ GS+ F+ FW +
Sbjct: 332 DPANTPAQVIYPAHRIQYAHAAT--IWTLD---WHPLGHILAS-GSKDNFTRFWSR 381
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 242 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 299
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 300 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 345
Score = 117 (46.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 58 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 115
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 116 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 164
Score = 102 (41.0 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 127 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 181
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 182 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 238
Score = 68 (29.0 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 246 LLSGSRDKTIKMWDVSTGMCLMTL 269
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 320
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 137 (53.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 37 FSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC 96
FSP P F+++ S D +R W + N + +G + PV D + G + A C
Sbjct: 426 FSP---PGDFVLSSSADTTIRLWSTKLNANLV--CYKGHNYPVWDAQFSPFGH--YFASC 478
Query: 97 --DKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
D+T + W + Q +++ A H + V W PN + TGS DKT++ WD++T
Sbjct: 479 SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQW--HPNCNYIATGSSDKTVRLWDVQT 533
Score = 44 (20.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 274 GTLATVGS-EGTFSFWDKDARTKLKPSE 300
G+L GS + T WD + TKL +E
Sbjct: 598 GSLLASGSADCTVKLWDVTSSTKLTKAE 625
Score = 37 (18.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/44 (18%), Positives = 18/44 (40%)
Query: 276 LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFA 319
+A+ +GT WD + P + + + + + G + A
Sbjct: 559 MASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLA 602
>UNIPROTKB|F1RZC0 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 OMA:ATDGLHE EMBL:CU468047 EMBL:CU062444
Ensembl:ENSSSCT00000005105 Uniprot:F1RZC0
Length = 396
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 39/146 (26%), Positives = 70/146 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL--DVAWIDDGT 89
+S +F+ S + Q ++ S D W+VE +G+ + +S G VL D+A + G
Sbjct: 198 LSACSFTNSDMQQ--ILTASGDGTCALWDVE-SGQLL-QSFHGHGADVLCLDLAPSETGN 253
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
GCDK WD+ S Q +Q + H++ + + + P+ +GS D T + +DL
Sbjct: 254 TFVSGGCDKKAMVWDMRSGQCIQAFETHESDINSVRYY--PSGDAFASGSDDATCRLYDL 311
Query: 149 RTPQPIMTINLPERCYCAD-VDYPLA 173
R + + + + A VD+ L+
Sbjct: 312 RADREVAIYSKESIIFGASSVDFSLS 337
>UNIPROTKB|H3BN58 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 EMBL:AC009065 HGNC:HGNC:24825 Ensembl:ENST00000569457
Bgee:H3BN58 Uniprot:H3BN58
Length = 202
Score = 127 (49.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 41/154 (26%), Positives = 69/154 (44%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P +IA + ++R +++ N S G+++ + V + +DG ++ G D T +
Sbjct: 52 PDRSMIAAAGYQHIRMYDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARI 111
Query: 103 WDLASN--QSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
WDL S Q ++ Q +AP+ C + PN L+ G + WDL+T I P
Sbjct: 112 WDLRSRNLQCQRIFQVNAPIN-CVCLH-PNQAELIVGDQSGAIHIWDLKTDHNEQLIPEP 169
Query: 161 ERCYCA-----DVDYPLAVVGTAGRGIVLYQLEG 189
E + D Y +A V + G V + L G
Sbjct: 170 EVSITSAHIDPDASY-MAAVNSTGNCYV-WNLTG 201
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 46 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 98
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 99 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 156
Query: 150 TPQPIM 155
Q ++
Sbjct: 157 ADQELL 162
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 46 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 98
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 99 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 155
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 156 RADQELMT 163
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
++ +GS D VR W++ GK + + + V VA DG V DKTV+ WD
Sbjct: 372 YIASGSGDKTVRLWDIA-EGKLV--YTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDT 428
Query: 106 ASNQSMQVAQH-DAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDLRTPQ 152
+ ++ ++ D + + + APN L++GS DKT+K W+L P+
Sbjct: 429 TTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 32/130 (24%), Positives = 58/130 (44%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I + FSP +L G+ D +R W++ +TI G + + + + +G +
Sbjct: 319 IRSVCFSPDGK---YLATGAEDKQIRVWDIAT--RTIKHIFSGHEQDIYSLDFAGNGRYI 373
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
DKTV+ WD+A + + + V T +P+ + GS DKT++ WD T
Sbjct: 374 ASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTV--AMSPDGLYVAAGSLDKTVRVWDTTTG 431
Query: 152 QPIMTINLPE 161
+ + P+
Sbjct: 432 YLVERLENPD 441
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPK--SMQGMSEPVLDVAWID 86
ED ++ +A SP L ++ AGS D VR W+ G + + + G + V VA+
Sbjct: 399 EDGVTTVAMSPDGL---YVAAGSLDKTVRVWDTT-TGYLVERLENPDGHKDSVYSVAFAP 454
Query: 87 DGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVK--TCH--------WIKA----PNYT 132
+G ++ DKT+K W+L N Q Q+++ K CH ++ + P+
Sbjct: 455 NGKELVSGSLDKTIKLWEL--NLPRQ--QYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGH 510
Query: 133 CLMTGSWDKTLKFWD 147
+M+GS D+ ++FWD
Sbjct: 511 WVMSGSKDRGVQFWD 525
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 120 (47.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 34/129 (26%), Positives = 62/129 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D ++ + FSP L + S D VR W ++ GK+ + + PV V + DG
Sbjct: 60 KDVVTSLQFSPQG---NLLASASRDKTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSADG 114
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIK----APNYTCLMTGSWDKTL 143
+ A DK++K W + + + + +H HW++ +P+ +++ S DKT+
Sbjct: 115 QFLVTASEDKSIKVWSMYRQRFLYSLYRHT------HWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 144 KFWDLRTPQ 152
K WD + Q
Sbjct: 169 KIWDTTSKQ 177
Score = 113 (44.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+I+ FSP+ + SWD + W ++P+ + G + V + + G
Sbjct: 20 AITSADFSPNCKQ---IATASWDTFLMLWSLKPHARAY--RYVGHKDVVTSLQFSPQGNL 74
Query: 91 VFMAGCDKTVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ A DKTV+ W L +S + H APV++ + + L+T S DK++K W +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF--LVTASEDKSIKVWSM 131
Score = 58 (25.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIF 318
VN + FHP +L T S+GT D + + + T + + +G++F
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELF 285
Score = 43 (20.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 265 NGIVFHPVHGT-LATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVS 323
N + F P +GT +A+ GS+ WD L+ + ++ + + +G A S
Sbjct: 190 NFVDFSP-NGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS 248
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 35/121 (28%), Positives = 61/121 (50%)
Query: 32 ISCMAFSP-STLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+S + F+P TL L++GSWD VR W ++ +G T + + SEP++ V+ DGT
Sbjct: 141 VSSIDFNPLGTL----LVSGSWDETVRIWNLQ-DG-TCLRMLPAHSEPIISVSISADGTL 194
Query: 91 VFMAGCDKTVKCWDLASNQSMQ--VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
A D + WD+ S Q ++ V + P+ + + Y L+ + + ++ WD
Sbjct: 195 CATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKY--LLVSNLNSQIRLWDY 252
Query: 149 R 149
R
Sbjct: 253 R 253
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 30/122 (24%), Positives = 59/122 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
E S++C++ SP+ + ++ S D ++ W + ++ G + V W
Sbjct: 54 EKSVTCVSVSPN---KRWIATSSSDGTIKIWSALTF--RLECTLFGHYRGISQVKWATGS 108
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ A DKT++ WD S++ + H V + + P T L++GSWD+T++ W+
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDF--NPLGTLLVSGSWDETVRIWN 166
Query: 148 LR 149
L+
Sbjct: 167 LQ 168
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 36/124 (29%), Positives = 59/124 (47%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+I C AF+P T + ++ G+ DN R W+ + +T +++G VL V+W DG
Sbjct: 145 TILCSAFAPHTSSR--MVTGAGDNTARIWDCDT--QTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ--HDAPVKTCHW-----IKAPNYTCLMTGSWDKTL 143
+ D T++ WD S Q + A H + + W +K + L + S D T+
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 144 KFWD 147
K WD
Sbjct: 261 KIWD 264
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
++ +AFSP ++++ S+DN+++ W+ +GK I + +G V VAW D +
Sbjct: 405 VNHVAFSPDGR---YIVSASFDNSIKLWDGR-DGKFI-STFRGHVASVYQVAWSSDCRLL 459
Query: 92 FMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
D T+K WD+ + + S+ + H V T W C +G DK ++ W
Sbjct: 460 VSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVC--SGGKDKMVRLW 513
Score = 121 (47.7 bits), Expect = 0.00021, P = 0.00021
Identities = 31/126 (24%), Positives = 61/126 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAW-----ID 86
+ C+++SP + GS DN +R W+ + +G+ + +++G S+ + ++W +
Sbjct: 189 VLCVSWSPDG---EVIATGSMDNTIRLWDPK-SGQCLGDALRGHSKWITSLSWEPIHLVK 244
Query: 87 DGTKVFMAGCDK--TVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
G+K +A K T+K WD S +C +K L +GS D+T++
Sbjct: 245 PGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSC--VKWGGQGLLYSGSHDRTVR 302
Query: 145 FWDLRT 150
WD+ +
Sbjct: 303 VWDINS 308
>UNIPROTKB|Q5F3D7 [details] [associations]
symbol:UTP15 "U3 small nucleolar RNA-associated protein 15
homolog" species:9031 "Gallus gallus" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
EMBL:AJ851713 IPI:IPI00585633 RefSeq:NP_001012624.1
UniGene:Gga.22725 ProteinModelPortal:Q5F3D7 STRING:Q5F3D7
Ensembl:ENSGALT00000029725 GeneID:426152 KEGG:gga:426152
InParanoid:Q5F3D7 NextBio:20827852 Uniprot:Q5F3D7
Length = 520
Score = 136 (52.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 32/112 (28%), Positives = 60/112 (53%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L+AGS + ++R +++ +G+ + G ++ V V ++ D ++F G D + WD+
Sbjct: 95 LVAGSEEGSIRLFDI--SGRAPLRQFDGHTKAVHVVGFLSDKYRIFSGGDDYSSSLWDIP 152
Query: 107 S-NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
S + + ++H V+ C N +TGS+D T+K +D RT +MTI
Sbjct: 153 SATEIVSYSEHSDYVR-CGCASKLNGDVFITGSYDHTVKVFDARTKSSVMTI 203
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 142 (55.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 33/106 (31%), Positives = 55/106 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F +GS D N++ W++ G + +G + V + + DG V G D VK WDL
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCI--HTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Query: 106 ASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
+ + + + H+ +++ + P+ L TGS D+T+KFWDL T
Sbjct: 173 TAGKLLTEFKSHEGQIQSLDF--HPHEFLLATGSADRTVKFWDLET 216
Score = 40 (19.1 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 206 RCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSN 252
R I FR K+ YG + R+ P N +N+ HRSN
Sbjct: 556 RSINDFRYKR-----YGRSNSRSRMGSP---PRNHDENYDLVSHRSN 594
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 130 (50.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 26/105 (24%), Positives = 52/105 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+ ++ SWD ++R WE+ +G+T ++ G + VL V++ D ++ D+T+K W+
Sbjct: 77 YALSASWDKSLRLWELS-SGQTT-RTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNT 134
Query: 106 ASNQSMQVAQ--HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ + H V + P +++ WDK +K W+L
Sbjct: 135 LGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWEL 179
Score = 111 (44.1 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 31/105 (29%), Positives = 54/105 (51%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTI--PK-SMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
L++GS D + W + + + PK S++G S V D DG A DK+++ W
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW 90
Query: 104 DLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+L+S Q+ + H V + + A N +++GS D+T+K W+
Sbjct: 91 ELSSGQTTRTFVGHTNDVLSVSF-SADNRQ-IVSGSRDRTIKLWN 133
Score = 40 (19.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMD 303
+N + P A+ G +G WD + L A D
Sbjct: 195 INTVTISPDGSLCASGGKDGVTMLWDLNESKHLYSLHAGD 234
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 54/194 (27%), Positives = 85/194 (43%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
D ++ +AF PS +L S+D R W++ + + + +G S V +A+ DG
Sbjct: 340 DRLARVAFHPSGK---YLGTTSYDKTWRLWDINTGAELLLQ--EGHSRSVYGIAFQQDGA 394
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
G D + WDL + +S+ V Q H PV + ++ +PN L +G D + WDL
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF--SPNGYHLASGGEDNQCRIWDL 452
Query: 149 RTPQPIMTI----NL-------PERCY-CADVDYPLAVVGTAGRGIVLYQ-LEGKPQEFK 195
R + + I NL P+ Y A Y + V +GR L + L G E K
Sbjct: 453 RMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAG--HESK 510
Query: 196 KTESPLKYQNRCIA 209
+ + CIA
Sbjct: 511 VASLDITADSSCIA 524
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/125 (25%), Positives = 64/125 (51%)
Query: 34 CMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM 93
C+ F+P + +++GS+D VR W+V GK + K + S+PV V + DG+ +
Sbjct: 118 CVNFNPQS---NMIVSGSFDETVRIWDVT-TGKCL-KVLPAHSDPVTAVDFNRDGSLIVS 172
Query: 94 AGCDKTVKCWDLASNQSMQ--VAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
+ D + WD + ++ + + PV + +PN ++ G+ D TL+ W++ +
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRF--SPNGKFILVGTLDNTLRLWNISSA 230
Query: 152 QPIMT 156
+ + T
Sbjct: 231 KFLKT 235
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 132 (51.5 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 33/131 (25%), Positives = 64/131 (48%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ + ++P+ + + SWD+ V+ W ++ ++ + + V W V
Sbjct: 109 VQSVDYNPTRRDSF--LTSSWDDTVKLWAMDRPASV--RTFKEHAYCVYQAVWNPKHGDV 164
Query: 92 FM-AGCDKTVKCWDLAS-NQSMQVAQHDAPVKTCHWIKAPNYTCLM-TGSWDKTLKFWDL 148
F A D T++ WD+ +M + HD + +C W K + C++ T S DKT+K WD+
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDD--CILATSSVDKTVKVWDV 222
Query: 149 RTPQ-PIMTIN 158
R+ + P+ +N
Sbjct: 223 RSYRVPLAVLN 233
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 120 (47.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+D ++ + FSP L + S D VR W ++ GK+ + + PV V + DG
Sbjct: 60 KDVVTSLQFSPQG---NLLASASRDRTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSADG 114
Query: 89 TKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIK----APNYTCLMTGSWDKTL 143
+ A DK++K W + + + + +H HW++ +P+ +++ S DKT+
Sbjct: 115 QLLVTASEDKSIKVWSMFRQRFLYSLYRHT------HWVRCAKFSPDGRLIVSCSEDKTI 168
Query: 144 KFWDLRTPQ 152
K WD Q
Sbjct: 169 KIWDTTNKQ 177
Score = 110 (43.8 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+I+ FSP+ + SWD + W ++P+ + G + V + + G
Sbjct: 20 AITSADFSPNCKQ---IATASWDTFLMLWSLKPHARAY--RYVGHKDVVTSLQFSPQGNL 74
Query: 91 VFMAGCDKTVKCWDL-ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ A D+TV+ W L +S + H APV++ + + + L+T S DK++K W +
Sbjct: 75 LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDF--SADGQLLVTASEDKSIKVWSM 131
Score = 57 (25.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
VN + FHP+ +L T S+GT D
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLD 256
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 265 NGIVFHPVHGT-LATVGSEGTFSFWD 289
N + F+P +GT +A+ GS+ WD
Sbjct: 190 NFVDFNP-NGTCIASAGSDHAVKIWD 214
>POMBASE|SPAC4D7.03 [details] [associations]
symbol:pop2 "F-box/WD repeat protein Pop2" species:4896
"Schizosaccharomyces pombe" [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=IPI] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC4D7.03 GO:GO:0007346 GO:GO:0005737 GO:GO:0005635
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0006511
GO:GO:0019005 GO:GO:0032876 KO:K03361 OrthoDB:EOG4B2X5M
EMBL:AF038867 EMBL:AF064515 PIR:T43557 RefSeq:NP_594956.1
ProteinModelPortal:O14170 IntAct:O14170 STRING:O14170
EnsemblFungi:SPAC4D7.03.1 GeneID:2543514 KEGG:spo:SPAC4D7.03
OMA:RIANMEC NextBio:20804524 Uniprot:O14170
Length = 703
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 38 SPSTLPQY--FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAG 95
S T+ Y L++GS+D+++R W V G+ + ++G S + V + +
Sbjct: 509 SVRTISGYGDILVSGSYDSSIRIWRVS-TGECL-YHLRGHSLRIYSVLYEPERNICISGS 566
Query: 96 CDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPI 154
DK+++ WDL++ V + HDA V + + L++GS D T++ WDL T +P+
Sbjct: 567 MDKSIRVWDLSTGTCKYVLEGHDAFVTLLNVFQ----NRLISGSADSTIRIWDLNTGKPL 622
Query: 155 MTI 157
M +
Sbjct: 623 MVL 625
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +A+ +G +
Sbjct: 429 VDCVKFHPNS---NYLATGSTDKTVRLWSAQ-QGNSV-RLFTGHRGPVLSLAFSPNGKYL 483
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
AG D+ +K WDLAS ++ H + + + +P+ + + + S D +++ WD+R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIR 540
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 135 (52.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 32/126 (25%), Positives = 64/126 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWI------ 85
+SC+A++P + GS DN +R W+ + G I +++ ++P++ + W
Sbjct: 180 VSCVAWAPDAS---IIATGSMDNTIRFWDPK-KGSPIGDALRRHTKPIMALCWQPLHLAP 235
Query: 86 DDGTKVFMAGC-DKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTL 143
D G + +G D TV+ W++ + ++ H AP+ W N+ + + S+DKT+
Sbjct: 236 DSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW-GGQNW--IYSSSYDKTI 292
Query: 144 KFWDLR 149
+ WD +
Sbjct: 293 RIWDAK 298
Score = 124 (48.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ +I FSPST + L+ GS D R W+ + +T +M+G + V VAW D
Sbjct: 134 DGTIISAQFSPSTSSR--LVTGSGDFTARLWDCDT--QTPIATMKGHTNWVSCVAWAPDA 189
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVA--QHDAPVKTCHWIK---APNYT--CLMTGSWDK 141
+ + D T++ WD + A +H P+ W AP+ L +GS D
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 142 TLKFWDLRTPQPIMTIN 158
T++ W+++ + T++
Sbjct: 250 TVRIWNVKLRTLLFTLS 266
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L++ S D + W+ + + K I K M G + V ++ DG + A D +V+ WD
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGK 419
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
+ + + + H A V C W + + L++ S D TLK WD+R+ + M +LP
Sbjct: 420 TGKFLATLRGHVAAVYQCAW--STDSRLLVSSSQDTTLKVWDVRSKK--MKFDLP 470
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 32/135 (23%), Positives = 65/135 (48%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
+++ + I+ + F PS +++ S D ++ W+ E +G+ ++++G + V D+
Sbjct: 101 ILTGHRNCINSVKFHPSFS---LMVSASEDATIKVWDFE-SGE-FERTLKGHTNAVQDID 155
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKT 142
+ G + D T+K WD + ++ HD V + P+ L++ S DKT
Sbjct: 156 FDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRF--TPSGDQLISSSRDKT 213
Query: 143 LKFWDLRTPQPIMTI 157
+K W+ T I T+
Sbjct: 214 IKVWEAATGYCIKTL 228
Score = 100 (40.3 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 25/95 (26%), Positives = 48/95 (50%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++SC+ F+PS Q LI+ S D ++ WE G I K++ G + V + +DG
Sbjct: 190 DHNVSCVRFTPSG-DQ--LISSSRDKTIKVWEAA-TGYCI-KTLVGHEDWVRKITVSEDG 244
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTC 123
+ + D+T+K W++ + + + + V C
Sbjct: 245 SCIASCSNDQTIKTWNIVKGECLATYREHSHVVEC 279
Score = 61 (26.5 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMT 156
L TGS DKT+K W+L T + + T
Sbjct: 319 LATGSRDKTIKIWELATGRCLAT 341
Score = 52 (23.4 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
V + FHP L +VG + T WD
Sbjct: 349 VRAVRFHPCGKFLLSVGDDKTIRVWD 374
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 135 (52.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV--LDVAWIDDGT 89
+ +AFSP L++GS+D V W+V + KS+ S+PV +DV W DGT
Sbjct: 264 VYAIAFSPKG---NMLVSGSYDEAVFLWDVR--SARVMKSLPAHSDPVSGIDVVW--DGT 316
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHD--APVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ D V+ WD ++ Q ++ H+ PV + + +PN ++ + D ++ WD
Sbjct: 317 LIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKF--SPNGKYVLAWTLDDCVRLWD 374
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 131 (51.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 134
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 135 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 179
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 240
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 31/115 (26%), Positives = 56/115 (48%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
L++ +D + W+V + + + +M G S V++ + DG+ +F DKT+ WD+A
Sbjct: 70 LLSSGFDRQIYIWQVYEDCENV-MAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIA 128
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
+ Q + + H V + + L +GS D+T+K WD R T+ P
Sbjct: 129 TGQRQRRFKGHGNFVNSVQGSRR-GQQLLCSGSDDRTIKIWDARKKHAAHTLESP 182
Score = 115 (45.5 bits), Expect = 0.00052, P = 0.00052
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPN--GKTIPKSMQG----MSEPVLDVA 83
D+I+ M+ SP F++ + DN +R W+V P G+ K QG + +L A
Sbjct: 225 DTITGMSLSPEG---DFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCA 281
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKT 142
W K+ D+ V WD+ + + + ++ H+ V + +P +++GS DKT
Sbjct: 282 WSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDF--SPKEPLILSGSSDKT 339
Query: 143 L 143
L
Sbjct: 340 L 340
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 131 (51.2 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 28/105 (26%), Positives = 50/105 (47%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 80 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 137
Query: 106 AS--NQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++Q H V + + +++ WDK +K W+L
Sbjct: 138 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL 182
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTC 309
+N + P A+ G +G WD + L + D+ + C
Sbjct: 198 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC 243
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 135 (52.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 33/120 (27%), Positives = 63/120 (52%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +A+ +G +
Sbjct: 425 VDCVKFHPNS---NYLATGSTDKTVRLWSTQ-QGNSV-RLFTGHRGPVLSLAFSPNGKYL 479
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
AG D+ +K WDLAS ++ H + + + +P+ + + + S D +++ WD+R+
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLVASASMDNSVRVWDIRS 537
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 130 (50.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 102 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 154
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 155 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 212
Query: 150 TPQPIM 155
Q ++
Sbjct: 213 ADQELL 218
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 135 (52.6 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +A+ +G +
Sbjct: 447 VDCVKFHPNS---NYLATGSTDKTVRLWSAQ-QGNSV-RLFTGHRGPVLSLAFSPNGKYL 501
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
AG D+ +K WDLAS ++ H + + + +P+ + + + S D +++ WD+R
Sbjct: 502 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIR 558
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W++ G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDIS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDFKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 118 (46.6 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 29/113 (25%), Positives = 59/113 (52%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC--DKTVKCWD 104
+++ S D ++ W+ E ++++G ++ V D+++ D T +A C D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISF--DHTGKLLASCSADMTIKLWD 178
Query: 105 LASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKK 303
Score = 69 (29.3 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDISTGMCLMTL 334
Score = 40 (19.1 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD-KDAR 293
V G++FH + + + T WD K+ R
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDFKNKR 371
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P FL++GS D ++ W+V G + ++ G V V + G + DKT++
Sbjct: 307 PGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
WD + + M+ H+ V + + K Y ++TGS D+T+K W+ R
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPY--VVTGSVDQTVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 26/111 (23%), Positives = 56/111 (50%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D ++ W+ E ++++G ++ V D+++ G + D T+K WD
Sbjct: 123 MVSASEDATIKVWDYETGD--FERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 107 SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
+ ++ HD V + + PN +++ S DKT+K W+++T + T
Sbjct: 181 GFECIRTMHGHDHNVSSVAIM--PNGDHIVSASRDKTIKMWEVQTGYCVKT 229
Score = 102 (41.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 28/117 (23%), Positives = 57/117 (48%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ ++S +A P+ +++ S D ++ WEV+ G + K+ G E V V DG
Sbjct: 192 DHNVSSVAIMPNG---DHIVSASRDKTIKMWEVQ-TGYCV-KTFTGHREWVRMVRPNQDG 246
Query: 89 TKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLK 144
T + D+TV+ W +A+ + ++ +H+ V+ W +Y+ + + +T K
Sbjct: 247 TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKK 303
Score = 68 (29.0 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTI 157
L++GS DKT+K WD+ T +MT+
Sbjct: 311 LLSGSRDKTIKMWDVSTGMCLMTL 334
Score = 41 (19.5 bits), Expect = 8.0e-06, Sum P(3) = 8.0e-06
Identities = 9/45 (20%), Positives = 20/45 (44%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIST 308
V G++FH + + + T WD + +K A + +++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 385
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 104 (41.7 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 29/103 (28%), Positives = 48/103 (46%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERC 163
+ C W + N +T S DKT++ WD+RT + I T+N C
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGNC 144
Score = 69 (29.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 132 (51.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID-DG-TKVFM-AGCDKTVKC 102
+++ GS+D + W +E GK + ++ G ++ V DVAW+ DG T + + A D+T+
Sbjct: 113 WILTGSYDKTAKIWSLE--GKAV-MTVAGHTDVVKDVAWVKRDGLTSLLLTASLDQTILL 169
Query: 103 WDLASNQSMQVAQH--DAPVKTCHWIKA-PNYTCLMTGSWDKTLKFW 146
W+ S ++ A+H + I P T +GSWDK LK W
Sbjct: 170 WEWNSERNKLKARHCCRGHAGSVDTIATDPTRTKFCSGSWDKMLKIW 216
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+ + SWD+ +R W+ E ++ S+ G S+ +++ ++ D+ V+ WD
Sbjct: 271 ICSASWDHTIRLWDAETG--SVKTSLTG-SKVFNHISYSPLCRRLASGSTDRHVRLWDPR 327
Query: 107 SNQS----MQVAQHDAPVKTCHWIKAPNYTC-LMTGSWDKTLKFWDLRTPQ-PIMTINLP 160
S + + H V W AP++ L++GS D +K WD R+ + P+ ++
Sbjct: 328 SKDGSLVLLSLTSHSGWVTAVKW--APSHEHQLVSGSLDNLVKLWDTRSCKAPLYDVSAH 385
Query: 161 E-RCYCAD-VDYPLAVVGTAGRGIVLYQ 186
E + C D D L + G A + Y+
Sbjct: 386 EDKVLCVDWTDSRLMLSGGADNKLYTYR 413
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 40/129 (31%), Positives = 63/129 (48%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
DS+ C+ F STL L++GS D V+ W GK I +++G + PV V I D
Sbjct: 354 DSVLCLTFD-STL----LVSGSADCTVKLWHFS-GGKRI--TLRGHTGPVNSVRIIRDRG 405
Query: 90 KVFMAGCDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
V D T+K W L +N + + H PV++ + ++C S D T+K WD+
Sbjct: 406 LVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC----SLDGTIKQWDI 461
Query: 149 RTPQPIMTI 157
+ + T+
Sbjct: 462 EKKKCVHTL 470
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 146 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 256
Query: 150 TPQPIM 155
Q ++
Sbjct: 257 ADQELL 262
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 146 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 255
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 256 RADQELMT 263
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 146 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 256
Query: 150 TPQPIM 155
Q ++
Sbjct: 257 ADQELL 262
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 146 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 255
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 256 RADQELMT 263
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 146 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 255
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 256 RADQELMT 263
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 146 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 256
Query: 150 TPQPIM 155
Q ++
Sbjct: 257 ADQELL 262
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 146 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 255
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 256 RADQELMT 263
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 146 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 256
Query: 150 TPQPIM 155
Q ++
Sbjct: 257 ADQELL 262
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L ++ S D W++E +T + G + V+ ++ D T++
Sbjct: 146 LSCCRF----LDDNQIVTSSGDTTCALWDIETGQQTT--TFTGHTGDVMSLSLAPD-TRL 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKT-CHWIKAPNYTCLMTGSWDKTLKFWDL 148
F++G CD + K WD+ Q H++ + C + PN TGS D T + +DL
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFF---PNGNAFATGSDDATCRLFDL 255
Query: 149 RTPQPIMT 156
R Q +MT
Sbjct: 256 RADQELMT 263
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/126 (27%), Positives = 59/126 (46%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+SC F L +I S D W++E +T+ G S V+ ++ DG +
Sbjct: 146 LSCCRF----LDDNQIITSSGDTTCALWDIETGQQTV--GFAGHSGDVMSLSLAPDG-RT 198
Query: 92 FMAG-CDKTVKCWDLASNQSMQV-AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
F++G CD ++K WD+ + Q H++ + + PN TGS D T + +DLR
Sbjct: 199 FVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFF--PNGYAFTTGSDDATCRLFDLR 256
Query: 150 TPQPIM 155
Q ++
Sbjct: 257 ADQELL 262
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 122 (48.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+ ++ SWD +R WE+ T + G + VL V++ D ++ D+++K W+
Sbjct: 77 YALSASWDKTLRLWELATG--TTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNT 134
Query: 106 ASNQSMQVAQ--HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ + + H V + P +++ WDK +K W+L
Sbjct: 135 LGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWEL 179
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMD 303
+N + P A+ G +GT WD + L A D
Sbjct: 195 INTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAND 234
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 134 (52.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPK-SMQGMSEPVLDVAWIDDG 88
+ I C FSP++ + L GS DN R W+ E PK +++G + VL V+W DG
Sbjct: 153 EPILCAQFSPASSAR--LATGSGDNTARIWDAETG---TPKHTLKGHAGWVLGVSWSPDG 207
Query: 89 TKVFMAGCDKTVKCWDLASNQSM--QVAQHDAPVKTCHW----IKAPNYTCLMTGSWDKT 142
T++ DKTV+ WD + + + ++ H V+ W + L++ S D T
Sbjct: 208 TRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 143 LKFWDLRT 150
+ W + T
Sbjct: 268 ARIWTVNT 275
Score = 40 (19.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD-KDAR 293
VN + F P +A+ G + W+ +D +
Sbjct: 416 VNHVTFSPDGSMIASAGWDNATKLWNARDGK 446
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +A+ +G +
Sbjct: 429 VDCVKFHPNS---NYLATGSTDKTVRLWSTQ-QGNSV-RLFTGHRGPVLALAFSPNGKYL 483
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
AG D+ +K WDLAS ++ H + + + +P+ + + + S D +++ WD+R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSSLIASASMDNSVRVWDIR 540
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/127 (29%), Positives = 68/127 (53%)
Query: 28 PEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDD 87
P++ ++ +A SP + AGS DN VR W+ + G + + +G + V VA+ D
Sbjct: 414 PKNGVTSVAMSPDGR---LVAAGSLDNIVRLWDAQ-TGYFLER-YEGHLDSVYSVAFSPD 468
Query: 88 GTKVFMAGCDKTVKCWDLASNQSMQVAQ-----HDAPVKTCHWIKAPNYTCLMTGSWDKT 142
G + DK++K WDL+ ++S + H V + + +P+ + L++GS D++
Sbjct: 469 GKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAF--SPDGSWLISGSKDRS 526
Query: 143 LKFWDLR 149
++FWD R
Sbjct: 527 VQFWDPR 533
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/107 (28%), Positives = 53/107 (49%)
Query: 46 FLIAGSWDNNVRCWEVEPNGK---TIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
F+++GS D + W++E GK T+ G V VA DG V D V+
Sbjct: 383 FIVSGSGDKKAKIWDIE-KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRL 441
Query: 103 WDLASNQSMQVAQHDAPVKTCHWIK-APNYTCLMTGSWDKTLKFWDL 148
WD + ++ +++ + + + + +P+ L +GS DK+LK WDL
Sbjct: 442 WDAQTGYFLE--RYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
>ZFIN|ZDB-GENE-030131-6176 [details] [associations]
symbol:mlst8 "MTOR associated protein, LST8
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-6176 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 KO:K08266 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 EMBL:BC044176 EMBL:BC068352
IPI:IPI00508476 RefSeq:NP_956171.1 UniGene:Dr.7298
ProteinModelPortal:Q803V5 STRING:Q803V5 Ensembl:ENSDART00000012743
Ensembl:ENSDART00000148326 GeneID:792689 KEGG:dre:792689
InParanoid:Q803V5 OMA:NNKGNCY NextBio:20931153 ArrayExpress:Q803V5
Bgee:Q803V5 Uniprot:Q803V5
Length = 326
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKC 102
P +IA + ++R +++ N + G+S+ + V + +DG ++ G D +
Sbjct: 52 PDRSMIAAAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARI 111
Query: 103 WDLASN--QSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT-------PQP 153
WDL S Q ++ Q +AP+ C + PN L+ G + WDL+T P+P
Sbjct: 112 WDLRSRNLQCQRIFQVNAPIN-CVCLH-PNQAELIVGDQSGVIHIWDLKTDHNEQLIPEP 169
Query: 154 IMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQE----FKKTESPL--KYQNRC 207
+++N D Y +A V ++G V G E KT+ P +Y RC
Sbjct: 170 DVSVNSVH--IDPDASY-MAAVNSSGNCYVWNLAGGMGDEVTQLIPKTKIPAHKRYSLRC 226
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/189 (23%), Positives = 87/189 (46%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+L+A S D R W V+ + ++ G S VL ++ D ++ D+T+K WDL
Sbjct: 380 YLLAASNDFASRIWTVDDY--RLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
S ++ + +C+ I C+M+G +DK ++FWD+R+ + + L +
Sbjct: 438 RSKVCIKTVFAGS---SCNDIVCTEQ-CVMSGHFDKKIRFWDIRSESVVREMELLGKITA 493
Query: 166 ADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAG-Y-GL 223
D++ + + R +L ++ + K+T S + +C + + P G Y
Sbjct: 494 LDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGF--KCGSDWTRVVFSPDGSYVAA 551
Query: 224 GSVEGRVAI 232
GS EG + +
Sbjct: 552 GSAEGSLYV 560
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 134 (52.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/189 (24%), Positives = 87/189 (46%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+L+A S D R W V+ + ++ G S VL ++ D ++ D+T+K WDL
Sbjct: 380 YLLAASNDFASRIWTVDDY--RLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
S ++ + +C+ I C+M+G +DK ++FWD+R+ + + L +
Sbjct: 438 RSKVCIKTVFAGS---SCNDIVCTEQ-CVMSGHFDKKIRFWDIRSESIVREMELLGKITA 493
Query: 166 ADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAG-Y-GL 223
D++ + + R +L ++ + K+T S + +C + + P G Y
Sbjct: 494 LDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGF--KCGSDWTRVVFSPDGSYVAA 551
Query: 224 GSVEGRVAI 232
GS EG + I
Sbjct: 552 GSAEGSLYI 560
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 267 IVFHPVHGTLATVGS-EGTFSFWDK-DARTKLKPSEAMDMSISTCALNHNGQIFAYAVSY 324
+VF P G+ GS EG+ W + + S+ SI+ A + +G ++ VS
Sbjct: 540 VVFSP-DGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSG---SHVVSV 595
Query: 325 D 325
D
Sbjct: 596 D 596
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERC-YCADVDYPLAVVGTA 178
+ C W + N +T S DKT++ WD+RT + I T+N E C D VG
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNK 161
Query: 179 GRGIVLYQLEGKPQEFKKTESPLKYQ 204
+V + ++ K K E K++
Sbjct: 162 D-DVVTF-IDAKTHR-SKAEEQFKFE 184
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERC-YCADVDYPLAVVGTA 178
+ C W + N +T S DKT++ WD+RT + I T+N E C D VG
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNK 161
Query: 179 GRGIVLYQLEGKPQEFKKTESPLKYQ 204
+V + ++ K K E K++
Sbjct: 162 D-DVVTF-IDAKTHR-SKAEEQFKFE 184
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERC-YCADVDYPLAVVGTA 178
+ C W + N +T S DKT++ WD+RT + I T+N E C D VG
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNK 161
Query: 179 GRGIVLYQLEGKPQEFKKTESPLKYQ 204
+V + ++ K K E K++
Sbjct: 162 D-DVVTF-IDAKTHR-SKAEEQFKFE 184
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERC-YCADVDYPLAVVGTA 178
+ C W + N +T S DKT++ WD+RT + I T+N E C D VG
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNK 161
Query: 179 GRGIVLYQLEGKPQEFKKTESPLKYQ 204
+V + ++ K K E K++
Sbjct: 162 D-DVVTF-IDAKTHR-SKAEEQFKFE 184
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 102 (41.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 38/146 (26%), Positives = 63/146 (43%)
Query: 65 GKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH----DAPV 120
G + + S V VAW DG ++ DKT + L ++ ++ + D+
Sbjct: 44 GHSKTREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVD 103
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP-ERC-YCADVDYPLAVVGTA 178
+ C W + N +T S DKT++ WD+RT + I T+N E C D VG
Sbjct: 104 QLC-WHPS-NPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNK 161
Query: 179 GRGIVLYQLEGKPQEFKKTESPLKYQ 204
+V + ++ K K E K++
Sbjct: 162 D-DVVTF-IDAKTHR-SKAEEQFKFE 184
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
I F P+ AT ++ S WD D ++ +D + T + +H+G++ A A
Sbjct: 230 IKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 122 (48.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 30/112 (26%), Positives = 60/112 (53%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
+++ S D +R W+ E G+ +S++G ++ V DVA+ G + D ++K WD
Sbjct: 123 MVSASEDATIRIWDFE-TGE-YERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ 180
Query: 107 -SNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMT 156
S + ++ HD V + ++ A +Y +++ S D+T+K W++ T + T
Sbjct: 181 QSYECIKTMHGHDHNVSSVAFVPAGDY--VLSASRDRTIKMWEVATGYCVKT 230
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
FL +GS D +R W+V G + ++ G V +A+ G + A DKT++ WDL
Sbjct: 311 FLASGSRDKTIRIWDVSV-GLCL-LTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 106 ASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
+ + M+ H + + KA Y +++GS D+T+K W+ R
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFHKAHPY--VISGSVDQTVKVWECR 411
Score = 49 (22.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 264 VNGIVFHPVHGTLATVGSEGTFSFWD 289
V G+ FHP L + + T WD
Sbjct: 342 VRGLAFHPGGKYLVSASDDKTIRVWD 367
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/132 (31%), Positives = 64/132 (48%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K V + E + + F S P LI+GS D ++C+++ + K+I SE V
Sbjct: 102 KQLLVYNEHERTAHTVTFHSSE-PN-ILISGSQDGTIKCFDIRSD-KSINTYFCN-SESV 157
Query: 80 LDVAWIDDGTKVFMAGCDK-TVKCWDLAS-NQSM-QVAQHDAPVKTCHWIKAPNYTCLMT 136
DV + +F A + TV+ WD+ ++ M Q H PV TC W N+ L T
Sbjct: 158 RDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDWHPTRNW--LAT 215
Query: 137 GSWDKTLKFWDL 148
GS DK +K W++
Sbjct: 216 GSRDKQIKVWNM 227
>UNIPROTKB|E1BVN4 [details] [associations]
symbol:GNB5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
PRINTS:PR00319 GeneTree:ENSGT00550000074331 InterPro:IPR016346
PIRSF:PIRSF002394 KO:K04539 OMA:ATDGLHE CTD:10681 EMBL:AADN02045388
EMBL:AADN02045389 IPI:IPI00572484 RefSeq:XP_413801.2
ProteinModelPortal:E1BVN4 Ensembl:ENSGALT00000007455 GeneID:415417
KEGG:gga:415417 NextBio:20819029 Uniprot:E1BVN4
Length = 395
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL--DVAWIDDGT 89
+S +F+ S + ++ S D W+VE +G+ + +S G VL D+A + G
Sbjct: 198 LSACSFTNSDMQ---ILTASGDGTCALWDVE-SGQLL-QSFHGHGADVLCLDLAPSETGN 252
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
GCDK WD+ S Q +Q + HD+ + + + P+ +GS D T + +DL
Sbjct: 253 TFVSGGCDKKAMVWDMRSGQCIQSFETHDSDINSVRYY--PSGDAFASGSDDATCRLYDL 310
Query: 149 RTPQPIMTINLPERCYCAD-VDYPLA 173
R + + + + A VD+ L+
Sbjct: 311 RADREVAIYSKESIIFGASSVDFSLS 336
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 45/189 (23%), Positives = 87/189 (46%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+L+A S D R W V+ + ++ G S VL ++ D ++ D+T+K WDL
Sbjct: 380 YLLAASNDFASRIWTVDDY--RLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
S ++ + +C+ I C+M+G +DK ++FWD+R+ + + L +
Sbjct: 438 RSKVCIKTVFAGS---SCNDIVCTEQ-CVMSGHFDKKIRFWDIRSESIVREMELLGKITA 493
Query: 166 ADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQP-AGY-GL 223
D++ + + R +L ++ + ++T S + +C + + P GY
Sbjct: 494 LDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGF--KCGSDWTRVVFSPDGGYVAA 551
Query: 224 GSVEGRVAI 232
GS EG + I
Sbjct: 552 GSAEGSLYI 560
Score = 46 (21.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 267 IVFHPVHGTLATVGSEGTFSFWDK-DARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
+VF P G +A +EG+ W + + S+ SI+ A + +G ++ VS D
Sbjct: 540 VVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSG---SHVVSVD 596
>RGD|620759 [details] [associations]
symbol:Gnb5 "guanine nucleotide binding protein (G protein), beta
5" species:10116 "Rattus norvegicus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IC;ISO;TAS] [GO:0032794 "GTPase activating protein
binding" evidence=IPI] [GO:0043234 "protein complex" evidence=IDA]
[GO:0044297 "cell body" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:620759
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0004871 GO:GO:0044297 PRINTS:PR00319 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 KO:K04539
CTD:10681 EMBL:AF001953 EMBL:AY552803 EMBL:BC089221 EMBL:AF022086
IPI:IPI00212659 RefSeq:NP_113958.1 UniGene:Rn.23042
ProteinModelPortal:P62882 SMR:P62882 PhosphoSite:P62882
PRIDE:P62882 GeneID:83579 KEGG:rno:83579 UCSC:RGD:620759
NextBio:616103 Genevestigator:P62882 Uniprot:P62882
Length = 353
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVL--DVAWIDDGT 89
+S +F+ S + ++ S D W+VE +G+ + +S G VL D+A + G
Sbjct: 156 LSACSFTNSDMQ---ILTASGDGTCALWDVE-SGQLL-QSFHGHGADVLCLDLAPSETGN 210
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
GCDK WD+ S Q +Q + H++ V + + P+ +GS D T + +DL
Sbjct: 211 TFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYY--PSGDAFASGSDDATCRLYDL 268
Query: 149 RTPQPIMTINLPERCYCAD-VDYPLA 173
R + + + + A VD+ L+
Sbjct: 269 RADREVAIYSKESIIFGASSVDFSLS 294
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/106 (27%), Positives = 54/106 (50%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
F ++GSWD +R W++ T + G ++ VL VA+ D ++ DKT+K W+
Sbjct: 77 FALSGSWDGTLRLWDLTTG--TTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNT 134
Query: 106 ASNQSMQVAQHDAPVKTCHWIK-APNYT--CLMTGSWDKTLKFWDL 148
+ Q D+ + ++ +PN + +++ WDK +K W+L
Sbjct: 135 LGVCKYTI-QDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNL 179
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +A+ +G +
Sbjct: 429 VDCVKFHPNS---NYLATGSTDKTVRLWSAQ-QGNSV-RLFTGHRGPVLSLAFSPNGKYL 483
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLR 149
AG D+ +K WDLAS ++ H + + + +P+ + + S D +++ WD+R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTF--SPDSGLIASASMDNSVRVWDIR 540
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/120 (26%), Positives = 62/120 (51%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
+ C+ F P++ +L GS D VR W + G ++ + G PVL +++ +G +
Sbjct: 429 VDCVKFHPNS---NYLATGSTDKTVRLWSAQ-QGNSV-RLFTGHRGPVLSLSFSPNGKYL 483
Query: 92 FMAGCDKTVKCWDLASNQSM-QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRT 150
AG D+ +K WDLAS ++ H + + + +P+ + + S D +++ WD+R+
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAF--SPDSGLIASASMDNSVRVWDIRS 541
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/206 (22%), Positives = 89/206 (43%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID--D 87
D I C+A P+ Q F++ S D ++ W+ + + + +G + V+ + I+ D
Sbjct: 71 DYIRCIAVHPT---QPFILTSSDDMLIKLWDWDKKW-SCSQVFEGHTHYVMQIV-INPKD 125
Query: 88 GTKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
+ A D+T+K W L S+ + + H+ V + + L++G+ D+ +K W
Sbjct: 126 NNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
Query: 147 DLRTPQPIMTIN-LPERCYCADV--DYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKY 203
D + + T+ + CA + P+ + G+ + ++ + ES L Y
Sbjct: 186 DYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH-----SSTYRLESTLNY 240
Query: 204 -QNR--CIAIFRDKKKQPAGYGLGSV 226
R C+A R GY GS+
Sbjct: 241 GMERVWCVASLRGSNNVALGYDEGSI 266
WARNING: HSPs involving 236 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 356 344 0.00097 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 486
No. of states in DFA: 620 (66 KB)
Total size of DFA: 283 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.29u 0.09s 29.38t Elapsed: 00:00:03
Total cpu time: 29.35u 0.10s 29.45t Elapsed: 00:00:03
Start: Thu Aug 15 15:31:03 2013 End: Thu Aug 15 15:31:06 2013
WARNINGS ISSUED: 2