RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12911
(356 letters)
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 121 bits (304), Expect = 2e-32
Identities = 67/325 (20%), Positives = 120/325 (36%), Gaps = 19/325 (5%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIP-KSMQGMSEP 78
+ ++ P+D IS + PS + L+ SWD ++ ++ + K + P
Sbjct: 2 QIVQIEQAPKDYISDIKIIPS---KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHP 58
Query: 79 VLDVAWI-DDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTG 137
+L +I + ++++ + DL + S Q ++ I L+
Sbjct: 59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAA 118
Query: 138 SWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
SWD ++ D R + V + + T +++ + Q F+
Sbjct: 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 198 ESPLKYQNRCIAIFRDKKKQPA-------GYGLGSVEGRVAIQYVNPA----NPKDNFTF 246
+ + + + A GY S++GRVA+++ + N F F
Sbjct: 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238
Query: 247 KCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSI 306
+CHR N Y VN I F P H L T GS+G S W+ R K+K +
Sbjct: 239 RCHRLNLK--DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-ED 295
Query: 307 STCALNHNGQIFAYAVSYDWSKGHE 331
S + + I A S D K +
Sbjct: 296 SVVKIACSDNILCLATSDDTFKTNA 320
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 79.0 bits (193), Expect = 4e-17
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 6/125 (4%)
Query: 24 VVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVA 83
+ E I+ + F P+ GS D R +++ + + + S + + V+
Sbjct: 221 TFTGHESDINAICFFPN---GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 84 WIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKT 142
+ G + D WD V HD V + + TGSWD
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV--TDDGMAVATGSWDSF 335
Query: 143 LKFWD 147
LK W+
Sbjct: 336 LKIWN 340
Score = 69.0 bits (167), Expect = 9e-14
Identities = 47/304 (15%), Positives = 85/304 (27%), Gaps = 32/304 (10%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
I M + L++ S D + W+ ++ S V+ A+ G
Sbjct: 55 LAKIYAMHWGTD---SRLLVSASQDGKLIIWDSYTT--NKVHAIPLRSSWVMTCAYAPSG 109
Query: 89 TKVFMAGCDKTVKCWDLASNQS--MQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFW 146
V G D ++L + + + + + ++T S D T W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169
Query: 147 DLRTPQPIMTINLPE---RCYCADVDYPLAVVGTAGRGIVLYQLE-GKP-QEFKKTESPL 201
D+ T Q T D L V G L+ + G Q F ES +
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDI 229
Query: 202 KYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDI 261
I F + + GS + + + ++
Sbjct: 230 ----NAICFFPNGNA----FATGSDDATCRLFDLRADQELMTYSHDNIIC---------- 271
Query: 262 YAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYA 321
+ + F L + + WD + D +S + +G A
Sbjct: 272 -GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-T 329
Query: 322 VSYD 325
S+D
Sbjct: 330 GSWD 333
Score = 45.5 bits (106), Expect = 5e-06
Identities = 31/253 (12%), Positives = 71/253 (28%), Gaps = 18/253 (7%)
Query: 70 KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKA 128
++++G + + W D + A D + WD + + + V TC + +
Sbjct: 49 RTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS 108
Query: 129 PNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLE 188
NY ++ R ++ L +
Sbjct: 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF---LDDNQIVTSSGDTT 165
Query: 189 GKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKC 248
+ + + + + + S + + + TF
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV-SGACDASAKLWDVREGMCRQTFTG 224
Query: 249 HRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDM--SI 306
H S +N I F P AT + T +D A +L ++ I
Sbjct: 225 HES-----------DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 307 STCALNHNGQIFA 319
++ + + +G++
Sbjct: 274 TSVSFSKSGRLLL 286
Score = 36.6 bits (83), Expect = 0.003
Identities = 18/126 (14%), Positives = 34/126 (26%), Gaps = 13/126 (10%)
Query: 211 FRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFH 270
RD +K A L + + V + T + H + + + +
Sbjct: 18 IRDARKACADATLSQITNNI--DPVGRIQMRTRRTLRGHLA-----------KIYAMHWG 64
Query: 271 PVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWSKGH 330
L + +G WD K+ + TCA +G A + +
Sbjct: 65 TDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 331 EHNNPN 336
Sbjct: 125 NLKTRE 130
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 76.3 bits (186), Expect = 3e-16
Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 11/301 (3%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
++ + F P +++ S D ++ W+ E ++++G ++ V D+++ G
Sbjct: 17 RSPVTRVIFHPV---FSVMVSASEDATIKVWDYETG--DFERTLKGHTDSVQDISFDHSG 71
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ D T+K WD H PN +++ S DKT+K W++
Sbjct: 72 KLLASCSADMTIKLWD-FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 149 RTPQPIMTINLPERCYCADVDYPLA-VVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRC 207
+T + T ++ + + +E K ++ C
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 208 IAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGG---AGGVQDIYAV 264
I+ + GS + + + T K + G V V
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 265 NGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSY 324
G++FH + + + T WD + +K A + +++ + S
Sbjct: 251 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSV 309
Query: 325 D 325
D
Sbjct: 310 D 310
Score = 69.8 bits (169), Expect = 5e-14
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 31 SISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTK 90
+ S P FL++GS D ++ W+V G + ++ G V V + G
Sbjct: 204 EATGSETKKSGKPGPFLLSGSRDKTIKMWDVS-TGMCL-MTLVGHDNWVRGVLFHSGGKF 261
Query: 91 VFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWD 147
+ DKT++ WD + + M+ H+ V + + ++TGS D+T+K W+
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF--HKTAPYVVTGSVDQTVKVWE 317
Score = 53.2 bits (126), Expect = 1e-08
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
++ + + F F+++ + D +R W+ + N + + K++ V + +
Sbjct: 247 DNWVRGVLFHSG---GKFILSCADDKTLRVWDYK-NKRCM-KTLNAHEHFVTSLDFHKTA 301
Query: 89 TKVFMAGCDKTVKCWD 104
V D+TVK W+
Sbjct: 302 PYVVTGSVDQTVKVWE 317
Score = 33.9 bits (76), Expect = 0.025
Identities = 17/116 (14%), Positives = 36/116 (31%), Gaps = 11/116 (9%)
Query: 239 NPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKP 298
P + + HRS V ++FHPV + + + T WD + +
Sbjct: 6 RPPEKYALSGHRS-----------PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT 54
Query: 299 SEAMDMSISTCALNHNGQIFAYAVSYDWSKGHEHNNPNKGNAIFLRPCFEDMKPRS 354
+ S+ + +H+G++ A + K + +
Sbjct: 55 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIM 110
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 73.3 bits (178), Expect = 5e-15
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 18/136 (13%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVE----------PNGKTIPKSMQGMSEP 78
+DS+ + F+ +++GS D +V+ W ++ PN T + G +
Sbjct: 254 KDSVYSVVFTRD---GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF 310
Query: 79 VLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIKA----PNYTC 133
VL VA + + D+ V WD S + + Q H V + P Y
Sbjct: 311 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV 370
Query: 134 LMTGSWDKTLKFWDLR 149
TGS D + W +
Sbjct: 371 FATGSGDCKARIWKYK 386
Score = 59.4 bits (142), Expect = 2e-10
Identities = 48/297 (16%), Positives = 88/297 (29%), Gaps = 25/297 (8%)
Query: 7 LSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGK 66
LS + + N + + I + FSP FL G+ D +R W++E
Sbjct: 99 LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD---GKFLATGAEDRLIRIWDIENRKI 155
Query: 67 TIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWI 126
+ + + G K+ D+TV+ WDL + Q + V T
Sbjct: 156 VMILQGHEQDIY--SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS 213
Query: 127 KAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPE----------RCYCADVDYPLAVVG 176
+ + GS D+ ++ WD T + ++ D V G
Sbjct: 214 P-GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 272
Query: 177 TAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQ----PAGYGLGSVEGRVAI 232
+ R + L+ L+ + +D + S +
Sbjct: 273 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGV 332
Query: 233 QYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWD 289
+ + + + HR V + NG P + AT + W
Sbjct: 333 LFWDKKSGNPLLMLQGHR-----NSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 51.0 bits (120), Expect = 9e-08
Identities = 51/324 (15%), Positives = 102/324 (31%), Gaps = 35/324 (10%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGK----------------TIPKSM 72
+ C+ FS +A + + + V S
Sbjct: 62 TSVVCCVKFSNDGE----YLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSS 117
Query: 73 QGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYT 132
+ V + DG + D+ ++ WD N+ + + P+
Sbjct: 118 PSSDLYIRSVCFSPDGKFLATGAEDRLIRIWD-IENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 133 CLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLA---VVGTAGRGIVLYQLEG 189
L++GS D+T++ WDLRT Q +T+++ + V G+ R + ++ E
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE- 235
Query: 190 KPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGL--GSVEGRVAIQYVNPANPKDNFTFK 247
++ +S + G + GS++ V + + AN K +
Sbjct: 236 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 295
Query: 248 CHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIS 307
+ + V + + + + FWDK + L + S+
Sbjct: 296 NSGTCEVTYIGHKDF-VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354
Query: 308 TCA------LNHNGQIFAYAVSYD 325
+ A L +FA S D
Sbjct: 355 SVAVANGSSLGPEYNVFATG-SGD 377
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 67.6 bits (163), Expect = 4e-13
Identities = 21/140 (15%), Positives = 41/140 (29%), Gaps = 4/140 (2%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGT 89
+ ISC A++ + + ++ V +E N ++ + V V W D
Sbjct: 8 EPISCHAWNKD---RTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN 64
Query: 90 KVFMAGCDKTVKCWDLASNQSMQVAQHDAPVK-TCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++ G D+ W L + APN GS + +
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 149 RTPQPIMTINLPERCYCADV 168
++ + V
Sbjct: 125 EQENDWWVCKHIKKPIRSTV 144
Score = 63.0 bits (151), Expect = 1e-11
Identities = 41/258 (15%), Positives = 80/258 (31%), Gaps = 13/258 (5%)
Query: 73 QGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ---HDAPVKTCHWIKAP 129
+ EP+ AW D T++ + + V ++ + N+ +QV + H+ V W AP
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW--AP 61
Query: 130 NYTCLMTGSWDKTLKFWDLRTP--QPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQL 187
+ ++T D+ W L+ +P + I R P G G + +
Sbjct: 62 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 188 EGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYG-LGSVEGRVAI-----QYVNPANPK 241
QE + + + GS + + I + V
Sbjct: 122 CYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAP 181
Query: 242 DNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
+ K V+G+ F +A V + T D D + + +
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 241
Query: 302 MDMSISTCALNHNGQIFA 319
+ + + A
Sbjct: 242 ETLPLLAVTFITESSLVA 259
Score = 45.6 bits (106), Expect = 5e-06
Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 4/118 (3%)
Query: 37 FSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC 96
+ + + + L+A D + + + S G + + +
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAGKL--SFGGRLDVPKQSSQRGLTARERFQNL 304
Query: 97 DKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTC--LMTGSWDKTLKFWDLRTPQ 152
DK A+ + + H V + C T D + WD+R+ +
Sbjct: 305 DKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362
Score = 32.1 bits (71), Expect = 0.099
Identities = 7/66 (10%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 11 TTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIA-GSWDNNVRCWEVEPNGKTIP 69
+S + + S ++S+S ++ + D + W+V +++
Sbjct: 307 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV----RSLE 362
Query: 70 KSMQGM 75
+++ +
Sbjct: 363 SALKDL 368
Score = 29.1 bits (63), Expect = 0.76
Identities = 27/310 (8%), Positives = 71/310 (22%), Gaps = 52/310 (16%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
++ + ++P + ++ D N W ++ + ++ V W +
Sbjct: 51 NGQVTGVDWAPDS---NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE 107
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDA-----PVKTCHWIKAPNYTCLMTGS----- 138
K + + + V +H V + W +
Sbjct: 108 KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 167
Query: 139 WDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVV------------GTAGRGIVLYQ 186
+ +K + R +P + V +
Sbjct: 168 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCL 227
Query: 187 LEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGY-----------GLGSVEGRVAIQYV 235
+ + T + + + AG+ G + +
Sbjct: 228 ADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP 287
Query: 236 NPANPKDNFTFKCHRSNGGAGGVQDIY------------AVNGIVFHPVHGT----LATV 279
++ + + ++ + +V+ I T
Sbjct: 288 KQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 347
Query: 280 GSEGTFSFWD 289
G +G S WD
Sbjct: 348 GMDGGMSIWD 357
Score = 29.1 bits (63), Expect = 0.82
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 7/65 (10%)
Query: 50 GSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG----TKVFMAGCDKTVKCWDL 105
+ D G + + V ++ + G ++ G D + WD+
Sbjct: 302 QNLDKKASSEGSAAAGAGLDSLHKN---SVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358
Query: 106 ASNQS 110
S +S
Sbjct: 359 RSLES 363
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 62.9 bits (151), Expect = 1e-11
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 46 FLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDL 105
+++GS D ++R W+VE ++ G + + D TVK WD+
Sbjct: 189 HVVSGSLDTSIRVWDVETG--NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDI 244
Query: 106 ASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPE 161
+ Q +Q Q ++ N ++T S D T+K WDL+T + I + E
Sbjct: 245 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300
Score = 45.6 bits (106), Expect = 5e-06
Identities = 41/248 (16%), Positives = 70/248 (28%), Gaps = 25/248 (10%)
Query: 50 GSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQ 109
GS D +R W++E M DG +V D VK WD +
Sbjct: 113 GSRDATLRVWDIETG----QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET 168
Query: 110 SMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCA-DV 168
+ Q + + +++GS D +++ WD+ T I T+ + ++
Sbjct: 169 CLHTLQGH---TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 225
Query: 169 DYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEG 228
+ V G A + ++ ++ F S +G
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNF-----VITSSDDG 280
Query: 229 RVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFS-- 286
V + + N +GG V I A GT
Sbjct: 281 TVKLWDLKTGEFIRNLVTLESGGSGG--------VVWRIRASNTKLVCAVGSRNGTEETK 332
Query: 287 --FWDKDA 292
D D
Sbjct: 333 LLVLDFDV 340
Score = 44.4 bits (103), Expect = 1e-05
Identities = 44/294 (14%), Positives = 84/294 (28%), Gaps = 34/294 (11%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I+C+ F + +++GS DN ++ W GK + +++ G + V D+
Sbjct: 20 ITCLQFCGN-----RIVSGSDDNTLKVWSAV-TGKCL-RTLVGHTGGVWSSQMRDNIIIS 72
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
V + +++GS D TL+ WD+ T
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-----EKRVVSGSRDATLRVWDIETG 127
Query: 152 QPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIF 211
Q + + VV A +V E + L+ +
Sbjct: 128 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW----DPETETCLHTLQGHTNRVYSL 183
Query: 212 RDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHP 271
+ GS++ + + V N T +G+
Sbjct: 184 QFDGIHVVS---GSLDTSIRVWDVETGNCIHTLTGHQS-------------LTSGMELKD 227
Query: 272 VHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
L + ++ T WD L+ + + S + F S D
Sbjct: 228 --NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD 279
Score = 41.0 bits (94), Expect = 1e-04
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 103 WDLASNQSMQVAQ-HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
W +S +V + HD V TC +++GS D TLK W T + + T+
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCL---QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
Score = 39.4 bits (90), Expect = 4e-04
Identities = 25/247 (10%), Positives = 59/247 (23%), Gaps = 28/247 (11%)
Query: 69 PKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKTCHWIK 127
PK ++G + V+ G ++ D T+K W + + ++ H V +
Sbjct: 9 PKVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM-- 65
Query: 128 APNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQL 187
N + + + + + + V G L
Sbjct: 66 RDNIIISGSTDRTLKVWNAETGECIHTL------YGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 188 EGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFK 247
E + L + + ++ + ++ +P T +
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM-----VKVWDPETETCLHTLQ 174
Query: 248 CHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSIS 307
H + + + + WD + + S
Sbjct: 175 GH-------------TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 221
Query: 308 TCALNHN 314
L N
Sbjct: 222 GMELKDN 228
Score = 26.7 bits (57), Expect = 5.1
Identities = 6/69 (8%), Positives = 13/69 (18%)
Query: 268 VFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWS 327
+ + + T W L+ + + + N I
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 328 KGHEHNNPN 336
E
Sbjct: 82 WNAETGECI 90
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 58.7 bits (140), Expect = 2e-10
Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 2/97 (2%)
Query: 52 WDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSM 111
EV K + VL + + G G D + W S+
Sbjct: 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300
Query: 112 QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++ + V +C + + ++TGS DK +++
Sbjct: 301 FQSKESSSVLSCDI--SVDDKYIVTGSGDKKATVYEV 335
Score = 50.2 bits (118), Expect = 1e-07
Identities = 35/300 (11%), Positives = 78/300 (26%), Gaps = 26/300 (8%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKS---MQGMSEPVLDVAWI 85
+ + + S T + V+ W++ G P S + +
Sbjct: 51 GEVVCAVTISNPTR----HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL 106
Query: 86 DDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKF 145
DG + + G T+ WDLA+ A+ + C+ + + +
Sbjct: 107 PDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166
Query: 146 WDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQN 205
Q ++ + +D G L+ + + E Q+
Sbjct: 167 VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG-----LDNTVRSWDLREGRQLQQH 221
Query: 206 RCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVN 265
+ P G +++ N V
Sbjct: 222 DFTSQIFSLGYCPTG------------EWLAVGMESSNVEVLHVNKPDKYQLHLHESCVL 269
Query: 266 GIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
+ F + G + + W + S+ S+ +C ++ + + S D
Sbjct: 270 SLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS-SVLSCDISVDDKYIV-TGSGD 327
Score = 48.3 bits (113), Expect = 6e-07
Identities = 15/133 (11%), Positives = 37/133 (27%), Gaps = 4/133 (3%)
Query: 57 RCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQH 116
+ + + + + G + + V+ + Q+ H
Sbjct: 205 NTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH 264
Query: 117 DAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADV--DYPLAV 174
++ V + + A ++ D L W I D+ D V
Sbjct: 265 ESCVLSLKF--AYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIV 322
Query: 175 VGTAGRGIVLYQL 187
G+ + +Y++
Sbjct: 323 TGSGDKKATVYEV 335
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 57.6 bits (137), Expect = 7e-10
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 7/140 (5%)
Query: 32 ISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKV 91
I+C+ F + ++I G+ D +R ++ N K + + G V + + G V
Sbjct: 16 ITCLQFEDN-----YVITGADDKMIRVYDSI-NKKFL-LQLSGHDGGVWALKYAHGGILV 68
Query: 92 FMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTP 151
+ + H++ V+ ++ N ++TGS D TL W L
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 152 QPIMTINLPERCYCADVDYP 171
+
Sbjct: 129 SSVPDHGEEHDYPLVFHTPE 148
Score = 53.4 bits (126), Expect = 1e-08
Identities = 34/297 (11%), Positives = 83/297 (27%), Gaps = 5/297 (1%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ + + ++ + L++GS D VR W+++ T + LD+ +
Sbjct: 53 DGGVWALKYAHGGI----LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI 108
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ D T+ W L S+ + N +
Sbjct: 109 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168
Query: 149 RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCI 208
+++ + DV + +G +Y + + + + R
Sbjct: 169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 228
Query: 209 AIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIV 268
+ + V + D ++ ++ I
Sbjct: 229 DLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 288
Query: 269 FHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
V + GSE F+ ++ + + + + + ++N G+ AV D
Sbjct: 289 TFYVSDNILVSGSENQFNIYNLRSGKLVH-ANILKDADQIWSVNFKGKTLVAAVEKD 344
Score = 41.8 bits (96), Expect = 8e-05
Identities = 6/79 (7%), Positives = 22/79 (27%), Gaps = 5/79 (6%)
Query: 72 MQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQV--AQHDAPVKTCHWIKAP 129
+ + + ++G + ++L S + + + + + ++
Sbjct: 277 FSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNF---K 333
Query: 130 NYTCLMTGSWDKTLKFWDL 148
T + D L
Sbjct: 334 GKTLVAAVEKDGQSFLEIL 352
Score = 27.5 bits (59), Expect = 2.5
Identities = 6/83 (7%), Positives = 15/83 (18%)
Query: 268 VFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYDWS 327
+ T + +D + L D + H G + + +
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVR 77
Query: 328 KGHEHNNPNKGNAIFLRPCFEDM 350
+
Sbjct: 78 VWDIKKGCCTHVFEGHNSTVRCL 100
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 54.5 bits (129), Expect = 5e-09
Identities = 44/310 (14%), Positives = 100/310 (32%), Gaps = 62/310 (20%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
+ S + C+ + +++G DN ++ W+ N + + G + V
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQ-----KIVSGLRDNTIKIWDK--NTLECKRILTGHTGSV 58
Query: 80 LDVAW--------------------------------------IDDGTKVFMAGCDKTVK 101
L + + + + D+++
Sbjct: 59 LCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIA 118
Query: 102 CWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN-LP 160
WD+AS + + + + + + +++ S D+T+K W+ T + + T+N
Sbjct: 119 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK 178
Query: 161 ERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAG 220
C L V G++ I L+ +E + L+ + R +
Sbjct: 179 RGIACLQYRDRLVVSGSSDNTIRLWDIE--------CGACLRVLEGHEELVRCIRFDNKR 230
Query: 221 YGLGSVEGRVAI-QYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATV 279
G+ +G++ + V +P+ C R+ G V + F + +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-----RVFRLQFDE--FQIVSS 283
Query: 280 GSEGTFSFWD 289
+ T WD
Sbjct: 284 SHDDTILIWD 293
Score = 36.7 bits (83), Expect = 0.003
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 2/103 (1%)
Query: 65 GKTIPKSMQGMSEPVLDVAWID-DGTKVFMAGCDKTVKCWDLASNQSMQVAQ-HDAPVKT 122
G+ + + SE V + D K+ D T+K WD + + ++ H V
Sbjct: 1 GRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLC 60
Query: 123 CHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
+ + T + I
Sbjct: 61 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF 103
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 52.8 bits (125), Expect = 2e-08
Identities = 12/116 (10%), Positives = 30/116 (25%), Gaps = 4/116 (3%)
Query: 45 YFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWD 104
+++ + + D +++ + +D
Sbjct: 221 QDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 278
Query: 105 LASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
L + ++ A D + L G L ++ T + + I LP
Sbjct: 279 LKQRKLIKAANLDHTYYCVAF--DKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 332
Score = 42.8 bits (99), Expect = 4e-05
Identities = 28/293 (9%), Positives = 66/293 (22%), Gaps = 24/293 (8%)
Query: 27 PPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPN----GKTIPKSMQGMSEPVLDV 82
P + +P + + + ++ +++ + + +
Sbjct: 37 PDKFGPGTAMMAPDN--RTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSF 94
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDA---PVKTCHWIKAPNYTCLMTGSW 139
A DG +V+ A K P LM +
Sbjct: 95 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 154
Query: 140 DKTL-------KFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQ 192
D +L D++T + + + L + + +
Sbjct: 155 DGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIA 214
Query: 193 EFKKTESPLKYQN--RCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNP-----ANPKDNFT 245
FK + + K + + +P N
Sbjct: 215 RFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRL 274
Query: 246 FKCHRSNGGAGGVQDIYA-VNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK 297
K ++ + F L G+ + ++ D K+K
Sbjct: 275 AKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK 327
Score = 39.7 bits (91), Expect = 4e-04
Identities = 11/129 (8%), Positives = 32/129 (24%), Gaps = 10/129 (7%)
Query: 35 MAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMA 94
A ++I ++ NN+ +V + + D ++
Sbjct: 2 PALKAGH---EYMIVTNYPNNLHVVDVA-SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVL 57
Query: 95 GC-DKTVKCWDLASNQSMQVAQHDAPVKT-----CHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ DL + ++ A + + +P+ +
Sbjct: 58 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117
Query: 149 RTPQPIMTI 157
P + +
Sbjct: 118 VVKPPRLEV 126
Score = 38.6 bits (88), Expect = 7e-04
Identities = 11/90 (12%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
Query: 20 KDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPV 79
K + + ++ + F+ P+ N + ++++ K I +
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLK-QRKLIKAANLD--HTY 294
Query: 80 LDVAWIDDGTKVFMAGCDKTVKCWDLASNQ 109
VA+ G K+++ G + ++ + +
Sbjct: 295 YCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
Score = 31.2 bits (69), Expect = 0.19
Identities = 16/177 (9%), Positives = 39/177 (22%), Gaps = 13/177 (7%)
Query: 128 APNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDY-----PLAVVGTAGRGI 182
+ ++ ++ L D+ + + +P++ V+ I
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI 64
Query: 183 VLYQLEG----KPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPA 238
L+ + AI D K+ A +
Sbjct: 65 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 124
Query: 239 NPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTK 295
+ + +Y ++ G+L G + T
Sbjct: 125 EVFSTADGLEAKPVRTFPMPRQVY----LMRAADDGSLYVAGPDIYKMDVKTGKYTV 177
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 49.9 bits (117), Expect = 2e-07
Identities = 39/374 (10%), Positives = 88/374 (23%), Gaps = 60/374 (16%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPK----SMQGMSEPVLDVAW 84
+ I ++ S F ++ S D ++ W+ + PK S + V
Sbjct: 14 DADIFSVSACNS-----FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 85 ID-------DGTKVFMAGCDKTVKCWDLASN-----------QSMQVAQHDAPVKTCHWI 126
+ + V + + + + W
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWG 128
Query: 127 KAPNYTC---LMTGSWDKTLKFWDLRTPQ-----------PIMTINLPERCYCADVDYPL 172
+ + L+ T W P + + +
Sbjct: 129 ASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFAT 188
Query: 173 AV---------VGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGL 223
+V G + + +L + N Q + +
Sbjct: 189 SVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 224 GSVEGRVAIQ-YVNPANPKDNFTFKCHRSNGGAGGVQDIY--AVNGIVFHPVHGTLATVG 280
+ + + A + + V + F+ TL + G
Sbjct: 249 AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG 308
Query: 281 SEGTFSFWDKDARTKLKP----SEAMDMSISTCALNHNGQIFAYAVSYD---WSKGHEHN 333
+G FWD + ++ + +++ A++ +G A +D KG
Sbjct: 309 WDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 368
Query: 334 NPNKGNAIFLRPCF 347
N C
Sbjct: 369 MGADLNESLCCVCL 382
Score = 47.2 bits (110), Expect = 1e-06
Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 23/159 (14%)
Query: 19 NKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVR----CWEVEPNGKTIPKSMQG 74
E P + + S L + G + V+ SM
Sbjct: 174 QGTVESPMTPSQFATSVDISERGL----IATGFNNGTVQISELSTLRPLYNFESQHSMIN 229
Query: 75 MSEPVLDVAWIDDGTKVFMAGCDKTV---KCWDLASNQSMQVAQHDAPVKTC-------- 123
S + V + G+ + +A + ++ + +
Sbjct: 230 NSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 289
Query: 124 ----HWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
+ L + WD L+FWD++T + I T+N
Sbjct: 290 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 328
Score = 46.8 bits (109), Expect = 2e-06
Identities = 12/97 (12%), Positives = 24/97 (24%), Gaps = 14/97 (14%)
Query: 73 QGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSM------------QVAQHDAPV 120
+ + V+ + D +K WD + + H V
Sbjct: 11 KAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV 68
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
A + T S+ L F+ + +
Sbjct: 69 LQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV 105
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 48.6 bits (114), Expect = 5e-07
Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLA 106
++ + ++ G+ + ++ M A T+ F ++ +DL
Sbjct: 212 ADPTAYRTGLLTMDL-ETGEMAMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLE 268
Query: 107 SNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLP 160
N S++ + + + + + + G L +D T + ++LP
Sbjct: 269 KNASIKRVPLPHSYYSVNV--STDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320
Score = 45.2 bits (105), Expect = 7e-06
Identities = 23/294 (7%), Positives = 66/294 (22%), Gaps = 16/294 (5%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNG--KTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DKTV 100
+ +++A + + + + E K I + G + + G + +++
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITIADAGPT--PMVPMVAPGGRIAYATVNKSESL 58
Query: 101 KCWDLASNQSMQVAQHDAPVKTCHWIKA----PNYTCLMTGSWDKTLKFWDLRTPQPIM- 155
DL + +++ P + + P+ L L+ +
Sbjct: 59 VKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118
Query: 156 ---TINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFR 212
L R + + + + ++ +
Sbjct: 119 LYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE 178
Query: 213 DKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQ-DIYAVNGIVFHP 271
+ E + KD G + + +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 272 VHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
+ + + + SI + ++ VS D
Sbjct: 239 MDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR--VPLPHSYYSVNVSTD 290
Score = 41.7 bits (96), Expect = 9e-05
Identities = 25/291 (8%), Positives = 69/291 (23%), Gaps = 22/291 (7%)
Query: 25 VSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPN---GKTIPKSMQGMSEPVLD 81
++ + +P + + ++ ++ G+ + + + +
Sbjct: 29 IADAGPTPMVPMVAPGG--RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86
Query: 82 VAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIK----------APNY 131
A DG + + ++ + + + A +
Sbjct: 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDG 146
Query: 132 TCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKP 191
+ L D + + T I E A D +
Sbjct: 147 SKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN--QHESSGVMATPFYT 204
Query: 192 QEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCH-- 249
+ + + + A + ++ VNPA + +
Sbjct: 205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLES 264
Query: 250 ---RSNGGAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK 297
N V ++ + T+ G+ G + +D + K
Sbjct: 265 FDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315
Score = 35.9 bits (81), Expect = 0.006
Identities = 11/107 (10%), Positives = 29/107 (27%), Gaps = 10/107 (9%)
Query: 10 TTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFL-------IAGSWDNNVRCWEVE 62
+ ++ + + A N + +++E
Sbjct: 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLE 268
Query: 63 PNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQ 109
+I + S V DG+ V++ G + +D + +
Sbjct: 269 -KNASIKRVPLPHS--YYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 48.4 bits (113), Expect = 5e-07
Identities = 18/97 (18%), Positives = 34/97 (35%)
Query: 52 WDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSM 111
N + S V + W DGTK+ A DKT+K W++A+ +
Sbjct: 214 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273
Query: 112 QVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ ++ L++ S + + F +
Sbjct: 274 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 41.0 bits (94), Expect = 1e-04
Identities = 32/269 (11%), Positives = 66/269 (24%), Gaps = 21/269 (7%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+ SPS Y+ +G NVR W+ + ++ S PV D++W +
Sbjct: 58 SHQTTVAKTSPS---GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++ G + + + + + S
Sbjct: 115 KRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF 174
Query: 149 RTPQPIMTINLP----ERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQ 204
P T G G ++ + E
Sbjct: 175 EGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 234
Query: 205 NRCIAIFRDKKKQPAGYGL--GSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIY 262
P G + S + + I V T K ++ ++D
Sbjct: 235 VAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA--------TLKVEKTIPVGTRIED-- 284
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKD 291
+ L ++ + G +F + +
Sbjct: 285 --QQLGIIWTKQALVSISANGFINFVNPE 311
Score = 38.0 bits (86), Expect = 0.001
Identities = 30/256 (11%), Positives = 55/256 (21%), Gaps = 11/256 (4%)
Query: 34 CMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM 93
+ +P+ I +V V T + S G
Sbjct: 22 VLGNTPAGD----KIQYCNGTSVYTVPVG--SLTDTEIYTEHSHQTTVAKTSPSGYYCAS 75
Query: 94 AGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQP 153
V+ WD + I + + + + +F
Sbjct: 76 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH-VFLFD 134
Query: 154 IMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRD 213
T N ++ R I
Sbjct: 135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 194
Query: 214 KKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVH 273
+ P G S G I N + F+ V +V G+ + P
Sbjct: 195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK----NVAHSGSVFGLTWSPDG 250
Query: 274 GTLATVGSEGTFSFWD 289
+A+ ++ T W+
Sbjct: 251 TKIASASADKTIKIWN 266
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 47.5 bits (111), Expect = 1e-06
Identities = 17/163 (10%), Positives = 44/163 (26%), Gaps = 13/163 (7%)
Query: 5 PALSTTTTTSTPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGS--WDNNVRCWEVE 62
P+ + V+ S + P AG ++ +
Sbjct: 203 PSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR---SMTSEAGEYDLNDMYKRSSPI 259
Query: 63 PNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM---AGCDKTVKCWDLASNQSMQVAQHDAP 119
+ + + +L + G A + +D+ + + V +
Sbjct: 260 NVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK---VTEVKNN 316
Query: 120 VKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPER 162
+ + + +M D + + L P+ T+ +R
Sbjct: 317 LTDLRL--SADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKR 357
Score = 34.5 bits (77), Expect = 0.018
Identities = 11/266 (4%), Positives = 46/266 (17%), Gaps = 10/266 (3%)
Query: 33 SCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVF 92
F I + +E + + +
Sbjct: 94 DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGET 153
Query: 93 MAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQ 152
+ + +D+ + ++ + + L S+ D
Sbjct: 154 DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFD--ADSKNLYYLSYRSLDPSPDRVVLN 211
Query: 153 PIMTINLPERCYCADVDYPLAVVGTA-GRGIVLYQLEGKPQEFKKTESPLKYQNRCIAIF 211
+ P + + + + + + + I
Sbjct: 212 FSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 271
Query: 212 RDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHP 271
+ + + + + + +
Sbjct: 272 LESSILIYSVPVHGEFAAYY------QGAPEKGVLLKYDVKTRK-VTEVKNNLTDLRLSA 324
Query: 272 VHGTLATVGSEGTFSFWDKDARTKLK 297
T+ +G + + +
Sbjct: 325 DRKTVMVRKDDGKIYTFPLEKPEDER 350
Score = 33.7 bits (75), Expect = 0.032
Identities = 12/111 (10%), Positives = 30/111 (27%), Gaps = 6/111 (5%)
Query: 47 LIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCD--KTVKCWD 104
LIA +V + + V D F+ G + +D
Sbjct: 17 LIAFVSRGQAFIQDVS-GTYVLKV---PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 105 LASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIM 155
+ ++ + ++ V + + + ++ + P I
Sbjct: 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 46.9 bits (109), Expect = 1e-06
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 70 KSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ--HDAPVKTCHWIK 127
+ G ++ + ++ DG +F A + + WD+++ S +V H +
Sbjct: 6 QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT-- 63
Query: 128 APNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDY 170
+ L T SWD LK + + + +
Sbjct: 64 -TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGL 105
Score = 46.9 bits (109), Expect = 2e-06
Identities = 33/299 (11%), Positives = 71/299 (23%), Gaps = 23/299 (7%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
+I+ ++ S L + + ++ W++ G + + + +
Sbjct: 12 NKAITALSSSAD---GKTLFSADAEGHINSWDIS-TGISNRVFPDVHATMITGIKTTSK- 66
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+F D +K + + + A + + +
Sbjct: 67 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126
Query: 149 RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCI 208
+ I+ C D VG + +Y+L G KT
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186
Query: 209 AIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIV 268
+ VA + F
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV---------------S 231
Query: 269 FHPVHGTLATVGSEGTFSFWD--KDARTKLKPSEAMDMSISTCALNHNGQIFAYAVSYD 325
+ P + LAT + + W+ K + + A MS + N + D
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIV-SAGQD 289
Score = 42.3 bits (97), Expect = 5e-05
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 7/120 (5%)
Query: 33 SCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVF 92
+ + S + + + S + V V+W D ++
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 93 MAGCDKTVKCWDLASNQSMQV----AQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
D +V W++ + A + V + W N T +++ D +KFW++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW---LNETTIVSAGQDSNIKFWNV 297
Score = 36.5 bits (82), Expect = 0.004
Identities = 5/56 (8%), Positives = 14/56 (25%), Gaps = 2/56 (3%)
Query: 116 HDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYP 171
H+ + + + L + + + WD+ T +
Sbjct: 11 HNKAITALSS--SADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Score = 26.1 bits (55), Expect = 6.2
Identities = 10/88 (11%), Positives = 23/88 (26%)
Query: 263 AVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLKPSEAMDMSISTCALNHNGQIFAYAV 322
A+ + TL + +EG + WD + + ++ T +
Sbjct: 14 AITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVS 73
Query: 323 SYDWSKGHEHNNPNKGNAIFLRPCFEDM 350
D K ++ +
Sbjct: 74 WDDHLKVVPAGGSGVDSSKAVANKLSSQ 101
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 44.8 bits (104), Expect = 9e-06
Identities = 13/148 (8%), Positives = 45/148 (30%), Gaps = 23/148 (15%)
Query: 30 DSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWI---- 85
I+ A+S L+ ++ + ++ +++ ++E W
Sbjct: 195 FLINHPAYSQ---KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251
Query: 86 ------DDGTKVFMAGCD----------KTVKCWDLASNQSMQVAQHDAPVKTCHWIKAP 129
++++ + V D + + + + + + + +
Sbjct: 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDE 311
Query: 130 NYTCLMTGSWDKTLKFWDLRTPQPIMTI 157
+ DKTL D + + + ++
Sbjct: 312 KPLLYALSTGDKTLYIHDAESGEELRSV 339
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 43.8 bits (101), Expect = 2e-05
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQ---VAQHDAPVKTCHWIKAPNYTCLMTGSW 139
D K G D T++ WD+ +++ +Q + + + + N +++ S
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR-IISLSL 316
Query: 140 DKTLKFWDL 148
D TL F++L
Sbjct: 317 DGTLNFYEL 325
Score = 41.4 bits (95), Expect = 1e-04
Identities = 33/314 (10%), Positives = 73/314 (23%), Gaps = 24/314 (7%)
Query: 26 SPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQG-MSEPVLDVAW 84
S + + +++ P+T VRC + + G S V V +
Sbjct: 14 STQRNFTTHLSYDPTT--NAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKF 71
Query: 85 --IDDGTKVFMAGCDKTVKCWDLASNQSMQVAQ---------HDAPVKTCHWIKAPNYTC 133
I + V W ++ + P+ W C
Sbjct: 72 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131
Query: 134 LMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQE 193
++ D F + + ++ + A + + G + +
Sbjct: 132 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP 191
Query: 194 FKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNG 253
F + + G I +
Sbjct: 192 F--------KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 243
Query: 254 GAGGVQDIYAVNGIVFHPVHGTLATVGSEGTFSFWDKDARTKLK--PSEAMDMSISTCAL 311
+ + + ATVG++ T WD ++ + + +
Sbjct: 244 IEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGV 303
Query: 312 NHNGQIFAYAVSYD 325
G ++S D
Sbjct: 304 VATGNGRIISLSLD 317
Score = 36.8 bits (83), Expect = 0.003
Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 1/73 (1%)
Query: 34 CMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFM 93
F+ S L D +R W+V + ++ V + G +
Sbjct: 253 GGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312
Query: 94 AGC-DKTVKCWDL 105
+ D T+ ++L
Sbjct: 313 SLSLDGTLNFYEL 325
Score = 35.7 bits (80), Expect = 0.007
Identities = 13/105 (12%), Positives = 31/105 (29%), Gaps = 5/105 (4%)
Query: 66 KTIPKSMQGMSEPVLDVAWIDDGTKV-FMAGCDKTVKCWDLASNQSMQVAQ----HDAPV 120
+ IP +++ + + G V+C D ++ V Q + V
Sbjct: 7 EIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVV 66
Query: 121 KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINLPERCYC 165
T + L +G + W + ++ + +
Sbjct: 67 TTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF 111
Score = 28.7 bits (62), Expect = 0.97
Identities = 4/33 (12%), Positives = 11/33 (33%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEV 61
+ + +I+ S D + +E+
Sbjct: 293 KQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 42.3 bits (98), Expect = 5e-05
Identities = 15/144 (10%), Positives = 36/144 (25%), Gaps = 8/144 (5%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
E+V P + + + + + + + + + V
Sbjct: 63 EIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLSEI--DTAACV 120
Query: 83 AWIDDGTKVFMAGC--DKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPN----YTCLMT 136
G F A C K + A+ + + DA + N +
Sbjct: 121 LAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLF 180
Query: 137 GSWDKTLKFWDLRTPQPIMTINLP 160
++ ++ D +P
Sbjct: 181 TTYGGNVRSADFSGDKPAFGKPWS 204
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 40.7 bits (94), Expect = 2e-04
Identities = 38/289 (13%), Positives = 72/289 (24%), Gaps = 18/289 (6%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDV 82
+V+ PED F + + + + + K + G + V
Sbjct: 12 KVLVKPEDRPKKQLNDLDLP-NLFSVTLRDAGQIALVDGD-SKKIVKVIDTGYA--VHIS 67
Query: 83 AWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYT-----CLMTG 137
G + + G D + DL + + +VA+ ++ + +
Sbjct: 68 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGA 127
Query: 138 SWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKT 197
W D T +P ++ VD I+ + K
Sbjct: 128 YWPPQFAIMDGETLEPKQIVS----TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 183
Query: 198 ESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGG 257
+ N A L + +Y A N +
Sbjct: 184 TGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA 243
Query: 258 VQDIYAVNGIV-----FHPVHGTLATVGSEGTFSFWDKDARTKLKPSEA 301
+ D+ HP +G + + G S K P A
Sbjct: 244 LVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYA 292
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 39.9 bits (91), Expect = 2e-04
Identities = 29/288 (10%), Positives = 61/288 (21%), Gaps = 42/288 (14%)
Query: 29 EDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDG 88
I+ + +P LI+GS+D + W Q S ++ +
Sbjct: 13 NKGITALTVNP-------LISGSYDGRIMEWSSS-------SMHQDHSNLIVSLDNSKAQ 58
Query: 89 TKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
++ D Q A + + L+ S+ +
Sbjct: 59 EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR 118
Query: 149 RTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIVLYQLEGKPQEFKKTESPLKYQNRCI 208
+ V V + L+ + S +
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178
Query: 209 AIFRDKKKQPAGYGLGSVEGRVAIQYVNPANPKDNFTFKCHRSNGGAGGVQDIYA----- 263
A K V+ + N + +
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238
Query: 264 ----------------------VNGIVFHPVHGTLATVGSEGTFSFWD 289
VN +++ TL + G++ W+
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
Score = 30.3 bits (66), Expect = 0.28
Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 14 STPNPNKDFEVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEV 61
S P K + ++ +D ++ + + + L++ D ++ W V
Sbjct: 243 SVKRPMKIIKALNAHKDGVNNLLWETPST----LVSSGADACIKRWNV 286
Score = 30.3 bits (66), Expect = 0.31
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 4/39 (10%)
Query: 116 HDAPVKTCH----WIKAPNYTCLMTGSWDKTLKFWDLRT 150
HD +KT I A L++GS+D + W +
Sbjct: 2 HDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSS 40
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.8 bits (91), Expect = 3e-04
Identities = 12/118 (10%), Positives = 32/118 (27%), Gaps = 3/118 (2%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGC-DKTVKC 102
Q IA + W + G + + V + D +++ + V
Sbjct: 4 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 63
Query: 103 WDLASNQSMQVAQHDAPV--KTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTIN 158
+ +A + ++ + H + GS++ + +
Sbjct: 64 YRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 121
Score = 26.3 bits (56), Expect = 6.5
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 26 SPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEP 63
P E S +Y + AG +++ +E+
Sbjct: 272 QPTETQPRGFNVDHSG--KYLIAAGQKSHHISVYEIVG 307
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 39.0 bits (90), Expect = 7e-04
Identities = 22/168 (13%), Positives = 38/168 (22%), Gaps = 17/168 (10%)
Query: 23 EVVSPPEDSISCMAFSPSTLPQYFLIAGSWDNNVRCWEVEPNG--KTIPKSMQGMSEPVL 80
+V PED + L F + + + + V
Sbjct: 12 KVHVAPEDRPTQQMNDW-DLENLFSVTLRDAGQIALIDGSTYEIKTVLD-----TGYAVH 65
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYT-----CLM 135
G +F+ G D V DL + VA+ + + +
Sbjct: 66 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA 125
Query: 136 TGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTAGRGIV 183
W D T +P + D I+
Sbjct: 126 GAYWPPQYVIMDGETLEPKKIQS----TRGMTYDEQEYHPEPRVAAIL 169
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 459
Score = 29.7 bits (66), Expect = 0.50
Identities = 16/90 (17%), Positives = 26/90 (28%)
Query: 38 SPSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCD 97
+P TL Q F N + G + K+
Sbjct: 192 TPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISK 251
Query: 98 KTVKCWDLASNQSMQVAQHDAPVKTCHWIK 127
+T + A N+ +A HDA V+ +
Sbjct: 252 ETGLKFQTAPNRFEALAAHDAIVECSGALN 281
>d2j01q1 d.41.4.2 (Q:6-141) Ribosomal protein L16p {Thermus
thermophilus [TaxId: 274]}
Length = 136
Score = 27.5 bits (61), Expect = 1.2
Identities = 13/75 (17%), Positives = 21/75 (28%), Gaps = 3/75 (4%)
Query: 122 TCHWIKAPNYT---CLMTGSWDKTLKFWDLRTPQPIMTINLPERCYCADVDYPLAVVGTA 178
WI A M + + K + P T E V
Sbjct: 33 EPAWITAQQIEAARVAMVRHFRRGGKIFIRIFPDKPYTKKPLEVRMGKGKGNVEGYVAVV 92
Query: 179 GRGIVLYQLEGKPQE 193
G V++++ G +E
Sbjct: 93 KPGRVMFEVAGVTEE 107
>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus
amyloliquefaciens [TaxId: 1390]}
Length = 353
Score = 28.1 bits (62), Expect = 1.5
Identities = 28/155 (18%), Positives = 46/155 (29%), Gaps = 12/155 (7%)
Query: 174 VVGTAGR-GIVLYQLEGKPQEFKKTESPLKYQNRCIAIFRDKKKQPAGYGLGSVEGRVAI 232
++ T + G+ +Y LEGK T R + KK EG+ I
Sbjct: 43 LITTNKKSGLAVYSLEGKMLHSYHTGKLNNVDIRYDFPL-NGKKVDIAAASNRSEGKNTI 101
Query: 233 QYVNPANPKDNFTFKCHRSNGGAGGVQDIYAVNGIVFHPVHGTL--ATVGSEGTFSFW-- 288
+ + A + ++Y + G G EG F +
Sbjct: 102 EIYAIDGKNGTLQSITDPNRPIASAIDEVYGF-SLYHSQKTGKYYAMVTGKEGEFEQYEL 160
Query: 289 --DKDARTKLKPSEAMDM--SISTCAL-NHNGQIF 318
DK+ K A M A + G ++
Sbjct: 161 NADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLY 195
>d1b77a2 d.131.1.2 (A:111-228) gp45 sliding clamp {Bacteriophage
RB69 [TaxId: 12353]}
Length = 118
Score = 27.0 bits (60), Expect = 1.5
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 81 DVAWIDDGTKVFMAGCDKTVKCWDLASNQ-SMQVAQHDAPVKTCHWIKAPNYTCLMTGSW 139
+A + K+ + G +K V+ L + S+ + +D I N + G++
Sbjct: 27 TIAITNKDGKIVINGYNK-VEDSGLTRPKYSLTLTDYDGSNNFNFVINMANMK-IQPGNY 84
Query: 140 D 140
Sbjct: 85 K 85
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 27.5 bits (59), Expect = 2.7
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 97 DKTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCL-MTGSWDKTLKFWDLRTPQPIM 155
+ D+ SN+ A + +P+ T + + + + D T I
Sbjct: 11 SDNISVIDVTSNK--VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68
Query: 156 TINLPERCYC 165
T+
Sbjct: 69 TVPAGSSPQG 78
Score = 26.8 bits (57), Expect = 4.8
Identities = 11/116 (9%), Positives = 27/116 (23%), Gaps = 1/116 (0%)
Query: 44 QYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCDKTVKCW 103
+A ++ + N ++ + + TV
Sbjct: 170 TKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229
Query: 104 DLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDLRTPQPIMTINL 159
D +N+ + + S+ T+ D T T+ +
Sbjct: 230 DTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284
>d1ieja_ c.94.1.2 (A:) Ovotransferrin {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 329
Score = 26.2 bits (57), Expect = 6.4
Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 15/111 (13%)
Query: 48 IAGSWDNNVRCWEVEPNGKTIPKS----------MQGMSEPVLDVAWIDDGTKVFMAGCD 97
+ G+ C + + + KT + + DVA++ T V D
Sbjct: 158 VPGATIEQKLCRQCKGDPKTKCARNAPYSGYSGAFHCLKDGKGDVAFVKHTT-VNENAPD 216
Query: 98 KTVKCWDLASNQSMQVAQHDAPVKTCHWIKAPNYTCLMTGSWDKTLKFWDL 148
+ + L + S D KTC+W + + ++ +K W
Sbjct: 217 QKDEYELLCLDGS--RQPVDN-YKTCNWARVAAHA-VVARDDNKVEDIWSF 263
>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica
charantia) [TaxId: 3673]}
Length = 190
Score = 25.4 bits (55), Expect = 9.7
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 39 PSTLPQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWID 86
P + + F I G W G + + L+ W +
Sbjct: 24 PGSGLRTFTIHGLWPQQSGTSLTNCPGSPFDITKISHLQSQLNTLWPN 71
>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility
associated SF11-RNase {Winged tobacco (Nicotiana alata)
[TaxId: 4087]}
Length = 196
Score = 25.4 bits (55), Expect = 9.9
Identities = 12/55 (21%), Positives = 17/55 (30%)
Query: 43 PQYFLIAGSWDNNVRCWEVEPNGKTIPKSMQGMSEPVLDVAWIDDGTKVFMAGCD 97
P F I G W +NV+ K G LD W+ + +
Sbjct: 26 PNNFTIHGLWPDNVKTRLHNCKPKPTYSYFTGKMLNDLDKHWMQLKFEQDYGRTE 80
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.134 0.432
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,401,892
Number of extensions: 65130
Number of successful extensions: 367
Number of sequences better than 10.0: 1
Number of HSP's gapped: 240
Number of HSP's successfully gapped: 110
Length of query: 356
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 270
Effective length of database: 1,226,816
Effective search space: 331240320
Effective search space used: 331240320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.2 bits)