Your job contains 1 sequence.
>psy12912
MANLEEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQY
KAAFKQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFI
TTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELN
ETQFN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12912
(185 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0021814 - symbol:Vps28 "Vacuolar protein sorting 2... 705 1.4e-69 1
UNIPROTKB|Q3T178 - symbol:VPS28 "Vacuolar protein sorting... 686 1.5e-67 1
UNIPROTKB|F1RSP0 - symbol:VPS28 "Uncharacterized protein"... 686 1.5e-67 1
MGI|MGI:1914164 - symbol:Vps28 "vacuolar protein sorting ... 686 1.5e-67 1
RGD|1306537 - symbol:Vps28 "vacuolar protein sorting 28 h... 686 1.5e-67 1
UNIPROTKB|Q9UK41 - symbol:VPS28 "Vacuolar protein sorting... 682 4.0e-67 1
UNIPROTKB|E1BIB3 - symbol:E1BIB3 "Uncharacterized protein... 561 2.6e-54 1
WB|WBGene00013598 - symbol:vps-28 species:6239 "Caenorhab... 423 1.1e-39 1
DICTYBASE|DDB_G0285295 - symbol:vps28 "vacuolar protein s... 393 1.7e-36 1
TAIR|locus:2138426 - symbol:VPS28-2 "AT4G05000" species:3... 385 1.2e-35 1
TAIR|locus:2119662 - symbol:VPS28-1 "AT4G21560" species:3... 373 2.2e-34 1
SGD|S000005986 - symbol:VPS28 "Component of the ESCRT-I c... 150 1.3e-23 2
UNIPROTKB|G4MV72 - symbol:MGG_08868 "Vacuolar protein sor... 160 1.6e-23 2
ASPGD|ASPL0000051947 - symbol:AN10129 species:162425 "Eme... 253 1.1e-21 1
CGD|CAL0003892 - symbol:VPS28 species:5476 "Candida albic... 136 1.2e-17 2
UNIPROTKB|Q59SD1 - symbol:VPS28 "Putative uncharacterized... 136 1.2e-17 2
POMBASE|SPAC1B3.07c - symbol:vps28 "ESCRT I complex subun... 157 1.8e-11 1
>FB|FBgn0021814 [details] [associations]
symbol:Vps28 "Vacuolar protein sorting 28" species:7227
"Drosophila melanogaster" [GO:0005575 "cellular_component"
evidence=ND] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0007291 "sperm individualization" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0044130
"negative regulation of growth of symbiont in host" evidence=IMP]
[GO:0010797 "regulation of multivesicular body size involved in
endosome transport" evidence=IDA] Pfam:PF03997 EMBL:AE013599
GO:GO:0009792 GO:GO:0030036 GO:GO:0015031 GO:GO:0005768
GO:GO:0007291 GO:GO:0044130 GO:GO:0048749 eggNOG:NOG276841
KO:K12184 OMA:FITIMDK InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 GO:GO:0010797 CTD:51160
GeneTree:ENSGT00390000007486 EMBL:AY060620 RefSeq:NP_652053.1
UniGene:Dm.3935 ProteinModelPortal:Q9V359 SMR:Q9V359 DIP:DIP-20897N
IntAct:Q9V359 MINT:MINT-1000470 STRING:Q9V359 PaxDb:Q9V359
PRIDE:Q9V359 EnsemblMetazoa:FBtr0088825 EnsemblMetazoa:FBtr0310370
GeneID:47408 KEGG:dme:Dmel_CG12770 UCSC:CG12770-RA
FlyBase:FBgn0021814 InParanoid:Q9V359 OrthoDB:EOG41G1M6
PhylomeDB:Q9V359 ChiTaRS:VPS28 GenomeRNAi:47408 NextBio:839034
Bgee:Q9V359 GermOnline:CG12770 Uniprot:Q9V359
Length = 210
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 133/179 (74%), Positives = 153/179 (85%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKLF N +EREK+DN ADLYA+INT+Q LEKAYIRDC+TP+EYTAACSK LVQYK AF
Sbjct: 10 EEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAF 69
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
KQVQ +E+P+VE FVKK+RLDCP+ALERIREDRPITI+DDKGNTSKCIA+IVSLFIT MD
Sbjct: 70 KQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEIVSLFITIMD 129
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL I MD LQPD++DL D MNRLS++P F+ K KV WL +L M ASDEL+E Q
Sbjct: 130 KLRLQINTMDALQPDVKDLADNMNRLSLIPEDFDAKLKVEKWLGSLNEMQASDELSEGQ 188
>UNIPROTKB|Q3T178 [details] [associations]
symbol:VPS28 "Vacuolar protein sorting-associated protein
28 homolog" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0031397 "negative regulation of protein
ubiquitination" evidence=ISS] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] Pfam:PF03997
GO:GO:0005886 GO:GO:0005737 GO:GO:0031902 GO:GO:0015031
GO:GO:0031397 KO:K12184 InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 EMBL:BC102078 IPI:IPI00711173
RefSeq:NP_001030581.1 UniGene:Bt.19057 HSSP:Q02767
ProteinModelPortal:Q3T178 SMR:Q3T178 PRIDE:Q3T178 GeneID:618785
KEGG:bta:618785 CTD:51160 HOVERGEN:HBG054248 OrthoDB:EOG4TQMB1
NextBio:20901350 Uniprot:Q3T178
Length = 221
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 125/179 (69%), Positives = 157/179 (87%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCVTP EYTAACS+LLVQYKAAF
Sbjct: 22 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAF 81
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VSLFIT MD
Sbjct: 82 RQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMD 141
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL+I+AMDE+QPDLR+LM+TM+R+S LP FEG++ VS WL TL MSASDEL+++Q
Sbjct: 142 KLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQ 200
>UNIPROTKB|F1RSP0 [details] [associations]
symbol:VPS28 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031397 "negative regulation of protein ubiquitination"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] Pfam:PF03997 GO:GO:0005829 GO:GO:0005768
GO:GO:0031397 OMA:FITIMDK InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 GeneTree:ENSGT00390000007486
EMBL:CU468594 Ensembl:ENSSSCT00000006484 Uniprot:F1RSP0
Length = 228
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 125/179 (69%), Positives = 157/179 (87%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCVTP EYTAACS+LLVQYKAAF
Sbjct: 29 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAF 88
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VSLFIT MD
Sbjct: 89 RQVQGSEVSSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMD 148
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL+I+AMDE+QPDLR+LM+TM+R+S LP FEG++ VS WL TL MSASDEL+++Q
Sbjct: 149 KLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQ 207
>MGI|MGI:1914164 [details] [associations]
symbol:Vps28 "vacuolar protein sorting 28 (yeast)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031397 "negative
regulation of protein ubiquitination" evidence=ISO] MGI:MGI:1914164
Pfam:PF03997 GO:GO:0005829 GO:GO:0005886 GO:GO:0005737
GO:GO:0031902 GO:GO:0015031 GO:GO:0031397 eggNOG:NOG276841
HOGENOM:HOG000203818 KO:K12184 OMA:FITIMDK InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 CTD:51160
HOVERGEN:HBG054248 OrthoDB:EOG4TQMB1 GeneTree:ENSGT00390000007486
EMBL:AF373710 EMBL:AK003699 EMBL:BC013535 IPI:IPI00133591
RefSeq:NP_080118.1 UniGene:Mm.30028 ProteinModelPortal:Q9D1C8
SMR:Q9D1C8 MINT:MINT-218076 STRING:Q9D1C8 PhosphoSite:Q9D1C8
PaxDb:Q9D1C8 PRIDE:Q9D1C8 DNASU:66914 Ensembl:ENSMUST00000078803
GeneID:66914 KEGG:mmu:66914 UCSC:uc007wlc.1 InParanoid:Q9D1C8
NextBio:323003 Bgee:Q9D1C8 CleanEx:MM_VPS28 Genevestigator:Q9D1C8
GermOnline:ENSMUSG00000062381 Uniprot:Q9D1C8
Length = 221
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 125/179 (69%), Positives = 157/179 (87%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCVTP EYTAACS+LLVQYKAAF
Sbjct: 22 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAF 81
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VSLFIT MD
Sbjct: 82 RQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMD 141
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL+I+AMDE+QPDLR+LM+TM+R+S LP FEG++ VS WL TL MSASDEL+++Q
Sbjct: 142 KLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQ 200
>RGD|1306537 [details] [associations]
symbol:Vps28 "vacuolar protein sorting 28 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005768 "endosome"
evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISO;ISS] RGD:1306537 Pfam:PF03997
GO:GO:0005829 GO:GO:0005886 GO:GO:0005737 GO:GO:0015031
GO:GO:0005768 GO:GO:0031397 eggNOG:NOG276841 HOGENOM:HOG000203818
InterPro:IPR007143 InterPro:IPR017899 InterPro:IPR017898
PANTHER:PTHR12937 PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313
HOVERGEN:HBG054248 OrthoDB:EOG4TQMB1 GeneTree:ENSGT00390000007486
EMBL:BC168742 IPI:IPI00203165 UniGene:Rn.36912 STRING:B5DEN9
PRIDE:B5DEN9 Ensembl:ENSRNOT00000019707 UCSC:RGD:1306537
Genevestigator:B5DEN9 Uniprot:B5DEN9
Length = 228
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 125/179 (69%), Positives = 157/179 (87%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCVTP EYTAACS+LLVQYKAAF
Sbjct: 29 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAF 88
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VSLFIT MD
Sbjct: 89 RQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMD 148
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL+I+AMDE+QPDLR+LM+TM+R+S LP FEG++ VS WL TL MSASDEL+++Q
Sbjct: 149 KLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQ 207
>UNIPROTKB|Q9UK41 [details] [associations]
symbol:VPS28 "Vacuolar protein sorting-associated protein
28 homolog" species:9606 "Homo sapiens" [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0031397 "negative
regulation of protein ubiquitination" evidence=IDA] [GO:0005768
"endosome" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] [GO:0046788 "egress of virus within host cell"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_11123 Pfam:PF03997 GO:GO:0005829 GO:GO:0005886
Reactome:REACT_116125 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0010008 EMBL:AF205589 GO:GO:0016044 GO:GO:0031397
GO:GO:0046788 eggNOG:NOG276841 HOGENOM:HOG000203818 KO:K12184
OMA:FITIMDK InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 CTD:51160 HOVERGEN:HBG054248
OrthoDB:EOG4TQMB1 ChiTaRS:VPS28 EMBL:AF182844 EMBL:BC006485
EMBL:BC019321 EMBL:BC050713 IPI:IPI00007155 RefSeq:NP_057292.1
RefSeq:NP_898880.1 UniGene:Hs.418175 ProteinModelPortal:Q9UK41
SMR:Q9UK41 IntAct:Q9UK41 MINT:MINT-234404 STRING:Q9UK41
PhosphoSite:Q9UK41 DMDM:13124619 PaxDb:Q9UK41 PRIDE:Q9UK41
DNASU:51160 Ensembl:ENST00000292510 Ensembl:ENST00000377348
Ensembl:ENST00000526054 Ensembl:ENST00000529182
Ensembl:ENST00000562786 Ensembl:ENST00000565984 GeneID:51160
KEGG:hsa:51160 UCSC:uc003zcs.1 GeneCards:GC08M145649
HGNC:HGNC:18178 HPA:HPA024688 HPA:HPA024745 MIM:611952
neXtProt:NX_Q9UK41 PharmGKB:PA38512 PhylomeDB:Q9UK41
GenomeRNAi:51160 NextBio:54073 ArrayExpress:Q9UK41 Bgee:Q9UK41
CleanEx:HS_VPS28 Genevestigator:Q9UK41 GermOnline:ENSG00000160948
Uniprot:Q9UK41
Length = 221
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 124/179 (69%), Positives = 157/179 (87%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCV+P EYTAACS+LLVQYKAAF
Sbjct: 22 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAF 81
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VSLFIT MD
Sbjct: 82 RQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMD 141
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
KLRL+I+AMDE+QPDLR+LM+TM+R+S LP FEG++ VS WL TL MSASDEL+++Q
Sbjct: 142 KLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDSQ 200
>UNIPROTKB|E1BIB3 [details] [associations]
symbol:E1BIB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031397 "negative regulation of protein ubiquitination"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] Pfam:PF03997 GO:GO:0005829 GO:GO:0005768
GO:GO:0031397 InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 GeneTree:ENSGT00390000007486
EMBL:DAAA02037442 EMBL:DAAA02037443 IPI:IPI01028102
Ensembl:ENSBTAT00000054515 OMA:SVRITNS Uniprot:E1BIB3
Length = 221
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 106/179 (59%), Positives = 140/179 (78%)
Query: 5 EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAF 64
EEVKL+ N +EREK+DN A+L+AV+ T+Q LEKAYI+DCVTP EYTAACS+LLVQYKAAF
Sbjct: 22 EEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVTPNEYTAACSRLLVQYKAAF 81
Query: 65 KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMD 124
+QVQG E +++ F +K+RLDCP A+ERI+EDRPITIKDDKGN ++CIAD+VS+ IT
Sbjct: 82 RQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSVRITNSM 141
Query: 125 KLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
+ L+IK ++ + D++ + T N L P+ F G +KVS L TL MSASDEL+++Q
Sbjct: 142 DMSLNIKKQNKTKKDVQLFLKTSNYLKTSPTRFSGAQKVSRVLQTLSGMSASDELDDSQ 200
>WB|WBGene00013598 [details] [associations]
symbol:vps-28 species:6239 "Caenorhabditis elegans"
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000813 "ESCRT I complex" evidence=IPI]
[GO:0032801 "receptor catabolic process" evidence=IMP] Pfam:PF03997
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0015031 GO:GO:0040011 GO:GO:0040035 GO:GO:0030163
GO:GO:0032801 GO:GO:0000813 EMBL:AL110500 eggNOG:NOG276841
HOGENOM:HOG000203818 KO:K12184 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 OMA:KDYITDK
PIR:T27471 RefSeq:NP_493382.1 ProteinModelPortal:Q9NA26 SMR:Q9NA26
STRING:Q9NA26 PaxDb:Q9NA26 EnsemblMetazoa:Y87G2A.10a.1
EnsemblMetazoa:Y87G2A.10a.2 GeneID:173229 KEGG:cel:CELE_Y87G2A.10
CTD:173229 WormBase:Y87G2A.10a GeneTree:ENSGT00390000007486
InParanoid:Q9NA26 NextBio:878797 Uniprot:Q9NA26
Length = 210
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 89/181 (49%), Positives = 121/181 (66%)
Query: 2 ANL-EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQY 60
ANL EV+LF N ERE+ +N ++L+AV+N L++LEK + RD V+ EY + C KL+ QY
Sbjct: 6 ANLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFKLIDQY 65
Query: 61 KAAFKQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFI 120
K + V G ++E F KKYRL CP+A+ERIRE RPIT+KDD+GN K IA IV FI
Sbjct: 66 KVTMRLVHGAT--SIEDFAKKYRLHCPAAIERIREGRPITVKDDQGNVLKHIASIVEQFI 123
Query: 121 TTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELN 180
T +D LRL+ +A+D+L P L DL + +N S +P KV W L SM+ASDE++
Sbjct: 124 TFLDALRLNTRAVDDLYPGLDDLYNAINTTSRVPIDAIVTTKVKKWHDRLSSMAASDEIS 183
Query: 181 E 181
+
Sbjct: 184 D 184
>DICTYBASE|DDB_G0285295 [details] [associations]
symbol:vps28 "vacuolar protein sorting 28 family
protein" species:44689 "Dictyostelium discoideum" [GO:0000813
"ESCRT I complex" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006605 "protein targeting" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
dictyBase:DDB_G0285295 Pfam:PF03997 GO:GO:0006605
GenomeReviews:CM000153_GR GO:GO:0031902 EMBL:AAFI02000077
GO:GO:0000813 eggNOG:NOG276841 KO:K12184 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 OMA:KDYITDK
HSSP:Q02767 RefSeq:XP_638318.1 ProteinModelPortal:Q54NF1
STRING:Q54NF1 EnsemblProtists:DDB0234023 GeneID:8625036
KEGG:ddi:DDB_G0285295 InParanoid:Q54NF1 ProtClustDB:CLSZ2430208
Uniprot:Q54NF1
Length = 288
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 80/188 (42%), Positives = 126/188 (67%)
Query: 3 NLEEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKA 62
N++EVKLF N ERE ++N A+LY++I ++LEKAYIRD V+PK+YT ACSKL+ Q+K+
Sbjct: 81 NIKEVKLFNNNIEREMYENLAELYSIIKVTEHLEKAYIRDDVSPKDYTTACSKLIAQFKS 140
Query: 63 AFKQVQGEEYPTVEHFVKKYRLDCPSALER-IREDRPITIKDDKGNTS------KCIADI 115
+ + + ++ V F+K Y L+C +A +R + + P T++ + +S K +A+
Sbjct: 141 S-QTLLKDQVSNVGQFMKDYDLNCKAAFDRLVIKGFPSTLEHNTNESSTDSAMAKNVAEA 199
Query: 116 VSLFITTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSA 175
V LFITTMD +RL + ++D + P L DLM+++N+ L FEGKEK+ W++ L M A
Sbjct: 200 VQLFITTMDSIRLKLVSVDGIYPLLSDLMESLNKNQWLGPTFEGKEKIKNWISILNQMKA 259
Query: 176 SDELNETQ 183
+DEL++ Q
Sbjct: 260 TDELDDDQ 267
>TAIR|locus:2138426 [details] [associations]
symbol:VPS28-2 "AT4G05000" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] [GO:0000813 "ESCRT I complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF03997
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161502 GO:GO:0015031
EMBL:AF162444 GO:GO:0000813 eggNOG:NOG276841 HOGENOM:HOG000203818
KO:K12184 ProtClustDB:CLSN2685575 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 EMBL:BT015071
EMBL:BT015727 EMBL:AK229295 IPI:IPI00525098 PIR:H85062
RefSeq:NP_567281.2 RefSeq:NP_974513.1 UniGene:At.33930
UniGene:At.72595 ProteinModelPortal:Q9S9T7 SMR:Q9S9T7 IntAct:Q9S9T7
STRING:Q9S9T7 PaxDb:Q9S9T7 PRIDE:Q9S9T7 DNASU:825842
EnsemblPlants:AT4G05000.1 EnsemblPlants:AT4G05000.2 GeneID:825842
KEGG:ath:AT4G05000 TAIR:At4g05000 InParanoid:Q9S9T7 OMA:KDYITDK
PhylomeDB:Q9S9T7 Genevestigator:Q9S9T7 Uniprot:Q9S9T7
Length = 210
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 77/185 (41%), Positives = 117/185 (63%)
Query: 6 EVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAFK 65
EVKL+ + +ERE ++N A+L+A+I + LEKAYIRD + P EY + C KL+V +K
Sbjct: 3 EVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSA 62
Query: 66 QVQGEEYPTVEHFVKKYRLDCPSALER-IREDRPITIKD------DKGNTSKCIADIVSL 118
++ + P +E F Y++DCP+AL R + P T++ N++ +A+ V
Sbjct: 63 TLK-DTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQN 121
Query: 119 FITTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDE 178
FIT+MD L+L++ A+D++ P L DL ++N+LSILP FEGK K+ WL+ L M A+DE
Sbjct: 122 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKTKMKEWLSRLSKMGAADE 181
Query: 179 LNETQ 183
L E Q
Sbjct: 182 LTEQQ 186
>TAIR|locus:2119662 [details] [associations]
symbol:VPS28-1 "AT4G21560" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006810 "transport"
evidence=ISS] [GO:0000813 "ESCRT I complex" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] Pfam:PF03997 GO:GO:0005794 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0015031 GO:GO:0005802 EMBL:AL022603
EMBL:AL161555 EMBL:AL035527 GO:GO:0000813 EMBL:AY136475
EMBL:BT006261 IPI:IPI00543574 PIR:T05164 RefSeq:NP_193887.1
RefSeq:NP_849417.1 RefSeq:NP_974585.1 UniGene:At.19732
ProteinModelPortal:O65421 SMR:O65421 IntAct:O65421 STRING:O65421
PaxDb:O65421 PRIDE:O65421 EnsemblPlants:AT4G21560.1
EnsemblPlants:AT4G21560.2 EnsemblPlants:AT4G21560.3 GeneID:828241
KEGG:ath:AT4G21560 TAIR:At4g21560 eggNOG:NOG276841
HOGENOM:HOG000203818 InParanoid:O65421 KO:K12184 OMA:FITIMDK
PhylomeDB:O65421 ProtClustDB:CLSN2685575 Genevestigator:O65421
GermOnline:AT4G21560 InterPro:IPR007143 InterPro:IPR017899
InterPro:IPR017898 PANTHER:PTHR12937 PIRSF:PIRSF017535
PROSITE:PS51310 PROSITE:PS51313 Uniprot:O65421
Length = 209
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 76/185 (41%), Positives = 116/185 (62%)
Query: 6 EVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAFK 65
EVKL+ + +ERE ++N A+LYA+I + LEKAYIRD ++P EY C KL+V +K
Sbjct: 2 EVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDLISPSEYETECQKLIVHFKTLSA 61
Query: 66 QVQGEEYPTVEHFVKKYRLDCPSALER-IREDRPITIKD------DKGNTSKCIADIVSL 118
++ + P +E F + Y++DC +A+ R + P T++ +++ +A+ V
Sbjct: 62 SLK-DMVPNIERFAETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQN 120
Query: 119 FITTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDE 178
FIT+MD L+L++ A+D++ P L DL ++N+LSILP FEGK K+ WL L M ASDE
Sbjct: 121 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKIKMKEWLLRLSKMGASDE 180
Query: 179 LNETQ 183
L E Q
Sbjct: 181 LTEQQ 185
>SGD|S000005986 [details] [associations]
symbol:VPS28 "Component of the ESCRT-I complex" species:4932
"Saccharomyces cerevisiae" [GO:0043162 "ubiquitin-dependent protein
catabolic process via the multivesicular body sorting pathway"
evidence=IC] [GO:0016020 "membrane" evidence=IEA] [GO:0000813
"ESCRT I complex" evidence=IDA;IPI] [GO:0006612 "protein targeting
to membrane" evidence=IMP;IPI] [GO:0006623 "protein targeting to
vacuole" evidence=IMP;IPI] [GO:0005768 "endosome" evidence=IEA;IDA]
[GO:0032403 "protein complex binding" evidence=IDA;IPI] [GO:0015031
"protein transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] SGD:S000005986 Pfam:PF03997
GO:GO:0032403 GO:GO:0031902 GO:GO:0006612 EMBL:BK006949 EMBL:U39205
GO:GO:0006623 GO:GO:0043162 GO:GO:0000813 PDB:2P22 PDBsum:2P22
PDB:2CAZ PDB:2F66 PDBsum:2CAZ PDBsum:2F66 PDB:2F6M PDBsum:2F6M
eggNOG:NOG276841 HOGENOM:HOG000203818 KO:K12184 OMA:FITIMDK
InterPro:IPR007143 InterPro:IPR017899 InterPro:IPR017898
PANTHER:PTHR12937 PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313
GeneTree:ENSGT00390000007486 OrthoDB:EOG4P5PKM EMBL:U50630
EMBL:AY692790 PIR:S60925 RefSeq:NP_015260.1 PDB:2G3K PDB:2J9U
PDB:2J9V PDBsum:2G3K PDBsum:2J9U PDBsum:2J9V
ProteinModelPortal:Q02767 SMR:Q02767 DIP:DIP-5828N IntAct:Q02767
MINT:MINT-468379 STRING:Q02767 PaxDb:Q02767 PeptideAtlas:Q02767
EnsemblFungi:YPL065W GeneID:856040 KEGG:sce:YPL065W CYGD:YPL065w
EvolutionaryTrace:Q02767 NextBio:980980 Genevestigator:Q02767
GermOnline:YPL065W Uniprot:Q02767
Length = 242
Score = 150 (57.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 32/103 (31%), Positives = 57/103 (55%)
Query: 5 EEVKLFTNT---KEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYK 61
+EV LF N+ K++E + +++Y+++ TL ++EKAY++D + +YT KLL Q+K
Sbjct: 20 DEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTVDKLLKQFK 79
Query: 62 AAFKQVQGEE----YPTVEHFVKKYRLDCPSALERIREDRPIT 100
EE + ++E F Y + +A+ R+ PIT
Sbjct: 80 VYLNSQNKEEINKHFQSIEAFCDTYNITASNAITRLERGIPIT 122
Score = 137 (53.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 96 DRPITIKDDKGNTSKCIADIVSLFITTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPS 155
D + DK +K +A+ FIT MD L+L+ A D+L P L +L+ ++NR++
Sbjct: 137 DNKQSSSSDKKFNAKYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINRVT--RD 194
Query: 156 GFEGKEKVSGWLTTLESMSASDELNETQ 183
FE + K+ W+ + +S D L ETQ
Sbjct: 195 DFENRSKLIDWIVRINKLSIGDTLTETQ 222
>UNIPROTKB|G4MV72 [details] [associations]
symbol:MGG_08868 "Vacuolar protein sorting-associated
protein 28" species:242507 "Magnaporthe oryzae 70-15" [GO:0000723
"telomere maintenance" evidence=ISS] [GO:0000813 "ESCRT I complex"
evidence=ISS] [GO:0005768 "endosome" evidence=ISS] [GO:0006612
"protein targeting to membrane" evidence=ISS] [GO:0006623 "protein
targeting to vacuole" evidence=ISS] [GO:0043162
"ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=ISS] Pfam:PF03997
GO:GO:0006612 GO:GO:0006623 EMBL:CM001232 GO:GO:0000723
GO:GO:0043162 GO:GO:0000813 KO:K12184 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313
RefSeq:XP_003713894.1 ProteinModelPortal:G4MV72
EnsemblFungi:MGG_08868T0 GeneID:2679854 KEGG:mgr:MGG_08868
Uniprot:G4MV72
Length = 249
Score = 160 (61.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 3 NL-EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYK 61
NL EEVKL ER+ D+ A+++++I T+ LEKA+++D + +YT C + L QY+
Sbjct: 25 NLDEEVKLADTRAERDLQDSLAEIFSIIVTIDELEKAFLKDAIPEADYTEICERSLKQYR 84
Query: 62 AAFK-QVQGEEYPTVEHFVKKYRLDCPSALERIREDRPIT 100
+ + + +E F ++ L+ P A ERIR P T
Sbjct: 85 SILADETVAAAFGDLEEFKAEWDLEVPRATERIRVGMPAT 124
Score = 125 (49.1 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 119 FITTMDKLRLDIKAMDELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDE 178
FIT +D LRL + A D+L P L D++ ++N+++ FE + K+ WL TL M A++E
Sbjct: 167 FITFLDALRLGLLAKDQLHPLLTDVIQSVNKVT--DRDFENRGKIVQWLITLNQMKATEE 224
Query: 179 LNETQ 183
L + Q
Sbjct: 225 LTDAQ 229
>ASPGD|ASPL0000051947 [details] [associations]
symbol:AN10129 species:162425 "Emericella nidulans"
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0000813
"ESCRT I complex" evidence=IEA] [GO:0006612 "protein targeting to
membrane" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] Pfam:PF03997
EMBL:BN001308 HOGENOM:HOG000203818 OMA:FITIMDK InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313
EnsemblFungi:CADANIAT00001709 Uniprot:C8VUH5
Length = 244
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 67/198 (33%), Positives = 109/198 (55%)
Query: 3 NL-EEVKLFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYK 61
NL EEVKL +++ ER+ +++ A++Y++I TL LEKAYI+D VT EYT C++LL QYK
Sbjct: 27 NLDEEVKLASSSAERDLYESLAEIYSIIVTLDGLEKAYIKDVVTEAEYTETCTRLLKQYK 86
Query: 62 AAF-KQVQGEEYPTVEHFVKKYRLDCPSALERIREDRPITIKD--------DK--GNTSK 110
++ + +E F + + L+CP A ER+R P T++ +K G T
Sbjct: 87 SSLGDDTVARAFVDLETFKRTWDLECPRATERLRIGMPATVEQASHSGPSTNKAPGTTGS 146
Query: 111 CIADIVSLFITTMDKLR--LDIKAMDELQPD-LRDLM-DTMNRLS-ILPSGFEGKEKVSG 165
SL +T + LD ++ + D L L+ + + ++ + + FE + K+
Sbjct: 147 AGGTSGSLILTATENFITFLDALKLNMVSKDALHPLLSEVIQSVNKVTDADFENRGKIIQ 206
Query: 166 WLTTLESMSASDELNETQ 183
WL TL M A++EL+E Q
Sbjct: 207 WLITLNQMRATEELSEEQ 224
>CGD|CAL0003892 [details] [associations]
symbol:VPS28 species:5476 "Candida albicans" [GO:0016485
"protein processing" evidence=IGI] [GO:0006623 "protein targeting
to vacuole" evidence=ISS] [GO:0000813 "ESCRT I complex"
evidence=ISS] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0071469 "cellular
response to alkalinity" evidence=IMP] [GO:0006612 "protein
targeting to membrane" evidence=IEA] [GO:0043328 "protein targeting
to vacuole involved in ubiquitin-dependent protein catabolic
process via the multivesicular body sorting pathway" evidence=IEA]
[GO:0036244 "cellular response to neutral pH" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] CGD:CAL0003892
Pfam:PF03997 GO:GO:0036244 GO:GO:0036178 GO:GO:0009405
GO:GO:0035690 GO:GO:0071469 GO:GO:0031505 GO:GO:0016485
GO:GO:0006623 GO:GO:0071285 GO:GO:0000813 eggNOG:NOG276841
HOGENOM:HOG000203818 KO:K12184 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 EMBL:AACQ01000153
EMBL:AACQ01000152 RefSeq:XP_712569.1 RefSeq:XP_712596.1
ProteinModelPortal:Q59SD1 STRING:Q59SD1 GeneID:3645794
GeneID:3645825 KEGG:cal:CaO19.212 KEGG:cal:CaO19.7844
Uniprot:Q59SD1
Length = 248
Score = 136 (52.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 79 VKKYRLDCPSALERIREDRPITIKDDKGN--TS---KCIADIVSLFITTMDKLRLDIKAM 133
+ K+ P A+ RI+ P TI+ GN TS + +A+I FIT MD ++L+ K+
Sbjct: 122 LSKFNDSYPHAVSRIKNGLPATIEQINGNQPTSASARLVAEITGNFITCMDAVKLNYKSK 181
Query: 134 DELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
++L P L DL+ +N L+ F GK K+ WL + ++ EL + +
Sbjct: 182 EQLHPLLSDLVVNLNELNE-ELQFTGKSKLVNWLIKINNLQT--ELTQEE 228
Score = 98 (39.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 3 NLEEVK--LFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKE-YTAACSKLLVQ 59
N E K L + +D+ A++Y+++ TL+ +E +Y++D +T KE YT+ +L+ Q
Sbjct: 25 NQEVTKSSLIKTPLHKSVYDSLAEIYSILPTLEMVENSYLKDYITDKERYTSTTYRLIHQ 84
Query: 60 YKAAFK 65
Y+ K
Sbjct: 85 YQMLIK 90
>UNIPROTKB|Q59SD1 [details] [associations]
symbol:VPS28 "Putative uncharacterized protein VPS28"
species:237561 "Candida albicans SC5314" [GO:0000813 "ESCRT I
complex" evidence=ISS] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016485
"protein processing" evidence=IGI] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0031505 "fungal-type cell wall organization"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036177 "filamentous growth of a population of unicellular
organisms in response to pH" evidence=IMP] [GO:0036178 "filamentous
growth of a population of unicellular organisms in response to
neutral pH" evidence=IMP] [GO:0036244 "cellular response to neutral
pH" evidence=IMP] [GO:0071285 "cellular response to lithium ion"
evidence=IMP] [GO:0071467 "cellular response to pH" evidence=IMP]
[GO:0071469 "cellular response to alkalinity" evidence=IMP]
CGD:CAL0003892 Pfam:PF03997 GO:GO:0036244 GO:GO:0036178
GO:GO:0009405 GO:GO:0035690 GO:GO:0071469 GO:GO:0031505
GO:GO:0016485 GO:GO:0006623 GO:GO:0071285 GO:GO:0000813
eggNOG:NOG276841 HOGENOM:HOG000203818 KO:K12184 InterPro:IPR007143
InterPro:IPR017899 InterPro:IPR017898 PANTHER:PTHR12937
PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313 EMBL:AACQ01000153
EMBL:AACQ01000152 RefSeq:XP_712569.1 RefSeq:XP_712596.1
ProteinModelPortal:Q59SD1 STRING:Q59SD1 GeneID:3645794
GeneID:3645825 KEGG:cal:CaO19.212 KEGG:cal:CaO19.7844
Uniprot:Q59SD1
Length = 248
Score = 136 (52.9 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 36/110 (32%), Positives = 59/110 (53%)
Query: 79 VKKYRLDCPSALERIREDRPITIKDDKGN--TS---KCIADIVSLFITTMDKLRLDIKAM 133
+ K+ P A+ RI+ P TI+ GN TS + +A+I FIT MD ++L+ K+
Sbjct: 122 LSKFNDSYPHAVSRIKNGLPATIEQINGNQPTSASARLVAEITGNFITCMDAVKLNYKSK 181
Query: 134 DELQPDLRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMSASDELNETQ 183
++L P L DL+ +N L+ F GK K+ WL + ++ EL + +
Sbjct: 182 EQLHPLLSDLVVNLNELNE-ELQFTGKSKLVNWLIKINNLQT--ELTQEE 228
Score = 98 (39.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 3 NLEEVK--LFTNTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKE-YTAACSKLLVQ 59
N E K L + +D+ A++Y+++ TL+ +E +Y++D +T KE YT+ +L+ Q
Sbjct: 25 NQEVTKSSLIKTPLHKSVYDSLAEIYSILPTLEMVENSYLKDYITDKERYTSTTYRLIHQ 84
Query: 60 YKAAFK 65
Y+ K
Sbjct: 85 YQMLIK 90
>POMBASE|SPAC1B3.07c [details] [associations]
symbol:vps28 "ESCRT I complex subunit Vps28"
species:4896 "Schizosaccharomyces pombe" [GO:0000813 "ESCRT I
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006900 "membrane budding" evidence=IC]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0043328
"protein targeting to vacuole involved in ubiquitin-dependent
protein catabolic process via the multivesicular body sorting
pathway" evidence=IMP] [GO:0045324 "late endosome to vacuole
transport" evidence=IMP] PomBase:SPAC1B3.07c Pfam:PF03997
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0031902 GO:GO:0043328
GO:GO:0006900 GO:GO:0000813 eggNOG:NOG276841 KO:K12184
InterPro:IPR007143 InterPro:IPR017899 InterPro:IPR017898
PANTHER:PTHR12937 PIRSF:PIRSF017535 PROSITE:PS51310 PROSITE:PS51313
PIR:T38025 RefSeq:NP_594791.1 ProteinModelPortal:O13872
STRING:O13872 EnsemblFungi:SPAC1B3.07c.1 GeneID:2542429
KEGG:spo:SPAC1B3.07c OrthoDB:EOG4P5PKM NextBio:20803486
Uniprot:O13872
Length = 248
Score = 157 (60.3 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/175 (25%), Positives = 92/175 (52%)
Query: 12 NTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPKEYTAACSKLLVQYKAAFKQVQ-GE 70
+TK ++ ++ + LY+++ L+ LEKA+ +D V+ ++ + C L+ Q+++ F + +
Sbjct: 21 HTKNQQVREDLSILYSILVALEQLEKAFTKDAVSTSDFNSTCELLIQQWESCFSDERVTQ 80
Query: 71 EYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKGNTSKCIADIVSLFITTMDKLRLDI 130
+ + E F KYRL CP A++RI+E I D++ ++ ++ +S TT + I
Sbjct: 81 AFGSFEDFCSKYRLQCPRAIKRIQEG----ISDERSQSNSTFSNAIS---TTAEP---SI 130
Query: 131 KAMDELQPD-LRDLMDTMNRLSILPSGFEGKEKVSGWLTTLESMS----ASDELN 180
AM++ P + N + + G V ++TTL+++ A D+L+
Sbjct: 131 -AMNDTTPQTVNPTKAPSNPSASIAKSIAGL--VQNFITTLDAIRLNFIAKDQLH 182
Score = 126 (49.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 53/195 (27%), Positives = 91/195 (46%)
Query: 4 LEEV-KLFT-NTKEREKFDNQADLYAVINTLQNLEKAYIRDCVTPK--EYTAACSKLLVQ 59
LE++ K FT + F++ +L +Q E + + VT + CSK +Q
Sbjct: 41 LEQLEKAFTKDAVSTSDFNSTCELL-----IQQWESCFSDERVTQAFGSFEDFCSKYRLQ 95
Query: 60 YKAAFKQVQ-G---EEYPTVEHFVKKYRLDCPSALERIREDRPITIKDDKG--NTS---- 109
A K++Q G E + F ++ + + P T+ K N S
Sbjct: 96 CPRAIKRIQEGISDERSQSNSTFSNAISTTAEPSIA-MNDTTPQTVNPTKAPSNPSASIA 154
Query: 110 KCIADIVSLFITTMDKLRLDIKAMDELQPDLRDLMDTMNRLS-ILPSGFEGKEKVSGWLT 168
K IA +V FITT+D +RL+ A D+L P L +L+ +M+ L+ L + K+ WL
Sbjct: 155 KSIAGLVQNFITTLDAIRLNFIAKDQLHPLLSELIVSMDDLTESLKIQVSCRNKLVQWLI 214
Query: 169 TLESMSASDELNETQ 183
+ +M+ +D+LN+ +
Sbjct: 215 KINNMNITDQLNDVE 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 185 185 0.00080 110 3 11 22 0.46 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 586 (62 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.60u 0.10s 19.70t Elapsed: 00:00:01
Total cpu time: 19.60u 0.10s 19.70t Elapsed: 00:00:01
Start: Thu Aug 15 15:32:56 2013 End: Thu Aug 15 15:32:57 2013