BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12922
(184 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC + RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF+++ W++NIEE +ASPDV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEE-------HASPDVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K D +R V + + LA ++ + F E S K NINI+ AF TLAR I+ +
Sbjct: 122 KCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAK 172
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 194 bits (492), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 192 bits (489), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 124/170 (72%), Gaps = 7/170 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF ++++ ++I+TIGIDFK + I+LD KLQIWDTAGQER
Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 70
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ +SF ++ W N+E Q+AS +V K+L GNK
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVE-------QHASENVYKILIGNK 123
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
D + QR V + Q LAD + F E S K N+N+DEAF TLAR I++Q
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQ 173
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV K++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE-------HASADVEKMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 122 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAK 172
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 129/171 (75%), Gaps = 8/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D ++ ++I+TIGIDFK + I+LD KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ SF ++ W++NIE Q+AS +V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE-------QHASDNVNKILVGNK 129
Query: 129 SDV-KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+D+ +++RAV T Q LAD Y + F+E S K N+N++E F ++AR I+++
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 180
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 8/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D ++ ++I+TIGIDFK + I+LD KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ SF ++ W++NIE Q+AS +V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE-------QHASDNVNKILVGNK 129
Query: 129 SDV-KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+D+ +++RAV T Q LAD Y + F+E S K N+N++E F ++ R I+++
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQR 180
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 124/168 (73%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ +R V + + LA +Y + F E S K ++N++EAF TLAR I
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDI 169
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 189 bits (481), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + TYISTIGIDFK + +D++ KLQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF+T+TTAYYRGAMGI+L+YD+T+ +SF+++ W+K+I+E NAS V ++L GN
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKE-------NASAGVERLLLGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D++ +R VQ + A+ LA + + F+E S K ++N+DEAF +LAR I
Sbjct: 122 KCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ +R V + + LA +Y + F E S K + N++EAF TLAR I
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 189 bits (481), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ +R V + + LA +Y + F E S K + N++EAF TLAR I
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ +R V + + LA +Y + F E S K + N++EAF TLAR I
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDI 169
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 189 bits (480), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 127/171 (74%), Gaps = 8/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D ++ ++I+TIGIDFK + I+LD KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ SF ++ W++NIE Q+AS V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIE-------QHASDSVNKILVGNK 129
Query: 129 SDV-KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+D+ +++RAV Q LAD Y + F+E S K N+N++E F ++A+ I+++
Sbjct: 130 ADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQR 180
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 123/168 (73%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ +R V + + LA +Y + F E S K + N++EAF TLAR I
Sbjct: 122 KCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 123/166 (74%), Gaps = 7/166 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + ++LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+ +YD+TN +SF ++ W++NIEE +AS DV +++ GN
Sbjct: 69 RFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEE-------HASSDVERMILGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLAR 173
K D+ +R V + + LA +Y + F E S K +IN++EAF+TLAR
Sbjct: 122 KCDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLAR 167
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 130/175 (74%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGIDFK K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D++ +R V + +A +++ F+E S K NINI++AFLTLA I ++T ++
Sbjct: 123 KCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVK 177
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + TYISTIGIDFK + ++++ KLQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF+T+TTAYYRGAMGI+L+YD+T+ +SF+++ W+K+I+E NAS V ++L GN
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKE-------NASAGVERLLLGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D++ +R VQ + A+ LA + + F+E S K ++N+DEAF +LAR I
Sbjct: 122 KCDMEAKRKVQREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + +TYISTIGIDFK + +D++ KLQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF+T+TTAYYRGAMGI+L+YD+T+ +SF+++ W+K+I+E NAS V ++L GN
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKE-------NASAGVERLLLGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D++ +R VQ + A LA + + F+E S K ++N+DEAF +LAR I
Sbjct: 122 KCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 127/168 (75%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + +TYISTIGIDF+ + +D++ KLQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF+T+TTAYYRGAMGI+L+YD+T+ +SF+++ W+K+I+E NAS V ++L GN
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKE-------NASAGVERLLLGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D++ +R VQ + A LA + + F+E S K ++N+DEAF +LAR I
Sbjct: 122 KCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 127/175 (72%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGIDFK K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+ +R V + +A + + F+E S K NINI++AFLTLA I +T ++
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 127/175 (72%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGIDFK K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+ +R V + +A + + F+E S K NINI++AFLTLA I +T ++
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 127/175 (72%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGIDFK K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+ +R V + +A + + F+E S K NINI++AFLTLA I +T ++
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/175 (49%), Positives = 127/175 (72%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGID K K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D++ +R V + +A + + F+E S K NINI++AFLTLA I +T ++
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 127/175 (72%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF D+ + T+ISTIGIDFK K ++L KLQIWDTAGQE
Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF T+TT+YYRGAMGI+L+YD+TN +SF++++ WL+NI+E +A+ DV ++L GN
Sbjct: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-------HANEDVERMLLGN 122
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+ +R V + +A + + F+E S K NINI++AFLTLA I +T ++
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVK 177
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 126/168 (75%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + +TYISTIGIDFK + ++++ KLQ+WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF+T+TTAYYRGAMGI+L+YD+T+ +SF+++ W+K+I+E NAS V ++L GN
Sbjct: 69 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKE-------NASAGVERLLLGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D++ +R V + A LA + + F+E S K ++N+DEAF +LAR I
Sbjct: 122 KCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 182 bits (463), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 126/181 (69%), Gaps = 11/181 (6%)
Query: 1 MADCNQTY----KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPT 56
M+ +TY K+L++GDS VGK+C++ RFC++ + ++I+TIGIDFK + ID+ +
Sbjct: 1 MSHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRV 60
Query: 57 KLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNA 116
KLQ+WDTAGQERFRT+TTAYYRGAMGILL+YDVT+ +SF ++ W +N++ A
Sbjct: 61 KLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSY-------A 113
Query: 117 SPDVVKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
+ V +L GNK D+ +R V T+ Q LAD + +PF E S K NIN++E F ++A IR
Sbjct: 114 NEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIR 173
Query: 177 E 177
+
Sbjct: 174 D 174
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 127/170 (74%), Gaps = 7/170 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF ++++ ++I+TIGIDFK + I+L+ KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ +SF ++ W++NIE Q+A+ V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIE-------QHATDSVNKMLIGNK 129
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
D+ ++ V + + LAD Y + F E S K +IN++EAF++LA+ I+++
Sbjct: 130 CDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI ++YDVT+++SF ++ WL+ I+ A+ V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRY-------ATEGVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ ++ V+ A+ AD+ +PF E S K N+++AFLT+AR I+E+
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKER 172
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 122/175 (69%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D++Y D+YISTIG+DFK + ++ D KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI++ YDVT+LESF ++ WL I+ AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRY-------ASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K+D+ +Q+ V T+ A+ AD +PF E S K N++EAF+ + I+ + Q
Sbjct: 122 KNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQ 176
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 126/177 (71%), Gaps = 7/177 (3%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + ++LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ESF ++ WL I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQAI 184
KSD+ +++ V+ A+ AD +PF E S K N+++AF+T+A I+ + Q I
Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPI 178
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 124/170 (72%), Gaps = 7/170 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D ++ ++I+TIGIDFK + I+L+ KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ +SF + W++NIE Q+AS V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIE-------QHASDSVNKMLIGNK 129
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
D+ ++ V + + LAD Y + F E S K ++N++EAF+ LA+ I+++
Sbjct: 130 CDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKR 179
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|P16976|YPTM1_MAIZE GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2
Length = 208
Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 123/170 (72%), Gaps = 7/170 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS+VGK+C + RF D++Y D+YISTIG+DFK + ++++ KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YD+T++ESF ++ WL I ++ A+ V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEI-------DRYANDSVRKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
K D+ RAV T AQ A +PF E S K++IN++EAFL ++ I++
Sbjct: 122 KCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKK 171
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 126/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ES+ ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D++Y D+YISTIG+DFK + ++ D KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI++ YDVT+LESF ++ WL I+ AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRY-------ASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+ +Q+ V T+ A+ AD +PF E S K N++EAF+ + I+ + Q
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQ 176
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 180 bits (456), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 126/176 (71%), Gaps = 7/176 (3%)
Query: 3 DCNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWD 62
D + +K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 63 TAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
TAGQERFRT+T++YYRGA GI+++YDVT+ ESF ++ WL+ I+ + AS +V K
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-------RYASENVNK 119
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+L GNKSD+ T++ V A+ AD +PF E S K N+++AF+T+A I+ +
Sbjct: 120 LLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNR 175
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 130/171 (76%), Gaps = 8/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D+T+ ++I+TIGIDFK + ++LD KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ SF ++ W+KNIE Q+AS +V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE-------QHASDNVNKILVGNK 129
Query: 129 SDV-KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+D+ +++RAV T Q LAD Y + F+E S K N+N++ F+++A+ I+++
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQR 180
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 179 bits (455), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 129/171 (75%), Gaps = 8/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L++GDS VGK+C++ RF D+T+ ++I+TIGIDFK + ++LD KLQIWDTAGQER
Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQER 76
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
FRT+TTAYYRGAMGILL+YDVT+ SF ++ W+KNIE Q+AS V K+L GNK
Sbjct: 77 FRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIE-------QHASDSVNKILVGNK 129
Query: 129 SDV-KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+D+ +++RAV T Q LAD Y + F+E S K N N+++ FL++A+ I+++
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQR 180
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 179 bits (454), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ESF ++ WL+ I+ + AS +V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-------RYASENVNKLLVGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K D+ T++ V A+ AD+ +PF E S K N+++AF+T+A I+++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 179 bits (454), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 123/175 (70%), Gaps = 7/175 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS+VGK+C++ RF D+ Y D+YISTIG+DFK + I+ D KLQIWDTAGQE
Sbjct: 9 FKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQE 68
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YD T +ESF ++ WL I+ A+ V K+L GN
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRY-------ANESVCKLLIGN 121
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K+D+ + V T+ + LAD +PF E S K +IN+++AFLT+A I+++ Q
Sbjct: 122 KNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQ 176
>sp|O76173|RAB1C_DICDI Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C
PE=2 SV=1
Length = 201
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 7/171 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
KILV+GDS VGK+C++ RF D + D+YISTIG+DF + I+LD KLQIWDTAGQER
Sbjct: 35 KILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQER 94
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
F+T+TT+YYRGA G++++YD+T+++SF + WL +++ ASP V+K++ GNK
Sbjct: 95 FKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRF-------ASPSVLKLIVGNK 147
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQT 179
D+ ++RAV K A+ AD ++P E S K++ IDEAF+ LA I++ T
Sbjct: 148 CDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIKKST 198
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 125/171 (73%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGK+C++ RF D+TY ++YISTIG+DFK + I+LD KLQIWDTAGQE
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRGA GI+++YDVT+ ESF ++ WL+ I+ + AS +V K+L GN
Sbjct: 72 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID-------RYASENVNKLLVGN 124
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K D+ T++ V A+ AD+ +PF E S K N++++F+T+A I+++
Sbjct: 125 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 175
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,204,043
Number of Sequences: 539616
Number of extensions: 2535030
Number of successful extensions: 9371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 7121
Number of HSP's gapped (non-prelim): 1196
length of query: 184
length of database: 191,569,459
effective HSP length: 110
effective length of query: 74
effective length of database: 132,211,699
effective search space: 9783665726
effective search space used: 9783665726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)