RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12922
(184 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 160 bits (405), Expect = 3e-51
Identities = 90/171 (52%), Positives = 122/171 (71%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++GDS VGKTC++ RF ++ + T+ISTIGIDFK + I+LD KLQIWDTAGQE
Sbjct: 7 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 66
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+TN +SF ++ W++NIEE DV K++ GN
Sbjct: 67 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-------DVEKMILGN 119
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K DV +R V + + LA +Y + F E S K NIN++ AF TLAR I+ +
Sbjct: 120 KCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 170
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 151 bits (382), Expect = 1e-47
Identities = 74/171 (43%), Positives = 108/171 (63%), Gaps = 8/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
KIL++GDS VGK+C++ RF ++ + ++I+TIGIDFK K +D++ KLQIWDTAGQE
Sbjct: 3 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAGQE 62
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+TTAYYRGAMGI+L+YD+T+ +F ++ W + + D ++L
Sbjct: 63 RFRTITTAYYRGAMGIILVYDITDERTFTNIKQW--------FKTVNEHANDEAQLLLVG 114
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
R V + LA +PF E S K + N++E F TLA+LI+E+
Sbjct: 115 NKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 165
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 144 bits (365), Expect = 3e-45
Identities = 70/178 (39%), Positives = 109/178 (61%), Gaps = 7/178 (3%)
Query: 3 DCNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWD 62
D + +KI+++G++ VGKTC+V RF + +TIG+DF K ++++ KLQIWD
Sbjct: 1 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 60
Query: 63 TAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
TAGQERFR++T +YYR A ++L YD+T ESF+ L WL+ I Q AS V+
Sbjct: 61 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREI-------EQYASNKVIT 113
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTR 180
VL GNK D+ +R V + A+ ++ + + E S K++ N+++ FL LA + + R
Sbjct: 114 VLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEAR 171
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 141 bits (357), Expect = 5e-44
Identities = 78/170 (45%), Positives = 112/170 (65%), Gaps = 8/170 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYY-DTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ 66
+K++++GDS VGKTC++ RF D + T+IST+GIDF+ K++D+D V KLQ+WDTAGQ
Sbjct: 7 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQ 66
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
ERFR++T AYYR A +LL+YDVTN SF ++ W ++ A DV +L G
Sbjct: 67 ERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAW-------LTEIHEYAQHDVALMLLG 119
Query: 127 NKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
NK D +R V+ +D + LA Y LPF E S K +N+D AF +A+ ++
Sbjct: 120 NKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELK 169
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 142 bits (358), Expect = 8e-44
Identities = 84/177 (47%), Positives = 122/177 (68%), Gaps = 7/177 (3%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+L++G+S VGK+C++ RF D+TY + YISTIG+DFK K ++LD KLQIWDTAGQE
Sbjct: 7 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 66
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFRT+T++YYRG+ GI+++YDVT+ ESF + WL+ I+ V+K+L GN
Sbjct: 67 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT-------STVLKLLVGN 119
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQAI 184
K D+K +R V+ A+ AD +PF E S + N+++AFLT+AR I+E Q +
Sbjct: 120 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNL 176
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 140 bits (354), Expect = 2e-43
Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 7/180 (3%)
Query: 3 DCNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWD 62
D T KIL++G+S VGK+ ++ RF D+T+ +TIG+DFK K I +D KL IWD
Sbjct: 3 DVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 62
Query: 63 TAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
TAGQERFRTLT +YYRGA G++L+YDVT ++F L+ WL + + +
Sbjct: 63 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWL-------NELETYCTRNDIV 115
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
+ K R V + A +S+ F E S K + AF L I + L
Sbjct: 116 NMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLW 175
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 136 bits (343), Expect = 6e-42
Identities = 66/168 (39%), Positives = 105/168 (62%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K +++GD VGK+C++H+F ++ + TIG++F +II++ KLQIWDTAGQE
Sbjct: 5 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 64
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFR +T +YYRGA G L++YD+T ++ HL+ WL + + + V +L GN
Sbjct: 65 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNT-------VIILIGN 117
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K+D++ QR V ++A+ A+ L F E S K N+++AFL A+ I
Sbjct: 118 KADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 165
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 136 bits (342), Expect = 1e-41
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 7/176 (3%)
Query: 3 DCNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWD 62
+ + +KIL++G+S+VGKT + R+ D+++ ++ST+GIDFK K I +D KLQIWD
Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60
Query: 63 TAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
TAGQER+RT+TTAYYRGAMG +LMYD+TN ESF + W I + +
Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI-------KTYSWDNAQV 113
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+L GNK D++ +R V ++ + LAD+ F+E S K NIN+ + F L +I E+
Sbjct: 114 LLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 135 bits (340), Expect = 2e-41
Identities = 66/171 (38%), Positives = 106/171 (61%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K++++GDS VGK+ ++ RF + STIG++F + I +D K QIWDTAGQE
Sbjct: 5 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 64
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
R+R +T+AYYRGA+G LL+YD+ +++++ WLK + + +A ++V +L GN
Sbjct: 65 RYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRD-------HADSNIVIMLVGN 117
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD++ RAV T +A+ A+ +L F E S + N++EAF + I
Sbjct: 118 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRI 168
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 134 bits (338), Expect = 6e-41
Identities = 71/186 (38%), Positives = 107/186 (57%), Gaps = 16/186 (8%)
Query: 3 DCNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKII----------DLD 52
D + K+L LGDS VGKT ++R+ D + +I+T+GIDF++K +
Sbjct: 1 DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 60
Query: 53 DVPTKLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNS 112
LQ+WDTAGQERFR+LTTA++R AMG LLM+D+T+ +SF ++ W +
Sbjct: 61 AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNW------MSQLQ 114
Query: 113 NQNASPDVVKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLA 172
+ VL GNK+D+ QR V + A+ LAD Y +P++E S N+++A TL
Sbjct: 115 ANAYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLL 174
Query: 173 RLIREQ 178
LI ++
Sbjct: 175 DLIMKR 180
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 131 bits (330), Expect = 5e-40
Identities = 60/168 (35%), Positives = 101/168 (60%), Gaps = 7/168 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K++ LG+ +VGKT ++ RF +++ +TY +TIGIDF K + L+D +LQ+WDTAGQE
Sbjct: 1 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 60
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFR+L +Y R + +++YD+TN+ SFQ W+ ++ DV+ +L GN
Sbjct: 61 RFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVR-------TERGSDVIIMLVGN 113
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K+D+ +R V ++ + A ++ F E S K N+ + F +A +
Sbjct: 114 KTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 130 bits (328), Expect = 2e-39
Identities = 69/171 (40%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K LV+G++ GK+C++H+F ++ + D TIG++F KII++ KLQIWDTAGQE
Sbjct: 6 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 65
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFR++T +YYRGA G LL+YD+T+ E++ L W ++ AS ++V +L GN
Sbjct: 66 RFRSVTRSYYRGAAGALLVYDITSRETYNALTNW-------LTDARMLASQNIVIILCGN 118
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K D+ R V +A A L F E S N++EAF+ AR I +
Sbjct: 119 KKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNK 169
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 127 bits (319), Expect = 3e-38
Identities = 68/171 (39%), Positives = 114/171 (66%), Gaps = 7/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K +++GD+ VGK+C++ +F D+ + + TIG++F +++++D KLQIWDTAGQE
Sbjct: 4 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 63
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
FR++T +YYRGA G LL+YD+T E+F HL WL++ Q++S ++V +L GN
Sbjct: 64 SFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDAR-------QHSSSNMVIMLIGN 116
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD++++R V+ ++ + A + L F E S K N++EAF+ A+ I +
Sbjct: 117 KSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 167
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 123 bits (308), Expect = 1e-36
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 7/170 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+++LG+ VGKT +V R+C+ + D +I+T+G F K +++ L IWDTAGQE
Sbjct: 4 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLAIWDTAGQE 63
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF L YYR + G +L+YD+T+ +SFQ + W+ + ++ + GN
Sbjct: 64 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWV-------KELRKMLGNEICLCIVGN 116
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
K D++ +R V ++A+ A++ Y S KQN I+E FL L + + E
Sbjct: 117 KIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 123 bits (308), Expect = 1e-36
Identities = 55/168 (32%), Positives = 90/168 (53%), Gaps = 3/168 (1%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+++LGD VGK+ +++R+ + TIG++F K +++D +QIWDTAGQE
Sbjct: 7 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 66
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RFR+L T +YRG+ LL + V + +SFQ+L+ W K ++ V+ GN
Sbjct: 67 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYY---ADVKEPESFPFVILGN 123
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
K D+ ++ + DN P++E S K N+ AF R +
Sbjct: 124 KIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 122 bits (307), Expect = 1e-36
Identities = 68/170 (40%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K+++LG+S VGK+ +V RF +++ STIG F + + LDD K +IWDTAGQE
Sbjct: 7 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 66
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
R+ +L YYRGA +++YD+TN ESF W+ + ASP++V L+GN
Sbjct: 67 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWV-------KELQRQASPNIVIALSGN 119
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
K+D+ +RAV ++AQ AD+ SL F E S K ++N++E F+ +A+ + +
Sbjct: 120 KADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 121 bits (303), Expect = 6e-36
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 7/170 (4%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
+ YK++VLG VGK+ + +F T+ + Y TI DF +K I++D P+ L+I DTAG
Sbjct: 2 REYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAG 60
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
E+F ++ Y + G +L+Y + N +SFQ + I V +L
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQII------RVKRYEKVPVILV 114
Query: 126 GNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
GNK D++++R V + + + LA+ + PF E S K +DE F + R +
Sbjct: 115 GNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQM 164
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 118 bits (297), Expect = 5e-35
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 7/172 (4%)
Query: 7 TYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ 66
+K++++G VGK+ + +F + + + Y T D +K + LD ++ I DTAGQ
Sbjct: 4 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKA-DSYRKKVVLDGEEVQIDILDTAGQ 62
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
E + + Y+R G L ++ +T +ESF + + I V +V +L G
Sbjct: 63 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRV------KEDENVPFLLVG 116
Query: 127 NKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
NKSD++ +R V ++A+ AD +++ + E S K N+D+ F L R IR +
Sbjct: 117 NKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 117 bits (292), Expect = 3e-34
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
YK++V+G VGK+ + + + D Y TI D +K + +D L I DTAGQE
Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQE 62
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
+ + Y R G L ++ + N +SF+ ++ + + I+ V S DV VL GN
Sbjct: 63 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRV------KDSDDVPMVLVGN 116
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
K D+ + V+++ AQ LA +Y +P+ E S K +++AF TL R IR+
Sbjct: 117 KCDLAART-VESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 114 bits (285), Expect = 4e-33
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 10/173 (5%)
Query: 7 TYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ 66
+ K+++LG++ VGK+ IV RF + + TIG F + + +++ K +IWDTAGQ
Sbjct: 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 62
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
ERF +L YYR A L++YDVT +SF +W+ ++ AS D++ L G
Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWV-------KELHEQASKDIIIALVG 115
Query: 127 NKSDV---KTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
NK D+ +R V ++ + LA+ L F+E S K N+++ FL + I
Sbjct: 116 NKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 113 bits (283), Expect = 7e-33
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
++T+K++V+G VGK+ + +F + Y D KI +D +P +L I DTA
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQFIQSYFVSDYD-PTIEDSYTKICSVDGIPARLDILDTA 62
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQE F + Y R G LL++ + + +SF + I V D VL
Sbjct: 63 GQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRV------KDRDDFPVVL 116
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
GNK+D+++QR V +A ++ + ++E S K +N+DEAF L R +R+
Sbjct: 117 VGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKY 170
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 113 bits (282), Expect = 1e-32
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
+ Y+++V+G VGK+ + +F + Y TI D K +DD +L I DTAG
Sbjct: 4 EKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTIE-DSYTKQCVIDDRAARLDILDTAG 62
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
QE F + Y R G LL++ VT+ SF+ + + + I V + +L
Sbjct: 63 QEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQRQILRVKDR------DEFPMILI 116
Query: 126 GNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
GNK+D+ QR V ++ Q LA + + E S K +N+D+AF L R+IR+
Sbjct: 117 GNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIRKF 169
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 112 bits (281), Expect = 1e-32
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
+ YK++VLG VGK+ + +F + + Y TI D +K +++D L+I DTAG
Sbjct: 2 REYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDCQQCMLEILDTAG 60
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
E+F + Y + G L+Y +T +F L + I V DV +L
Sbjct: 61 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDT------EDVPMILV 114
Query: 126 GNKSDVKTQRAVQTKDAQMLADNY-SLPFYEVSCKQNINIDEAFLTLARLIR 176
GNK D++ +R V + Q LA + + F E S K IN++E F L R I
Sbjct: 115 GNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQIN 166
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 110 bits (275), Expect = 8e-32
Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 10/169 (5%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+KI+V+GDSNVGKTC+ +RFC + D +TIG+DF+++ +D+D K+Q+WDTAGQE
Sbjct: 3 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 62
Query: 68 RFRTL-TTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
RFR YYR ++ +YD+TN+ SF L W++ ++ + D+ ++L G
Sbjct: 63 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQ------HLLANDIPRILVG 116
Query: 127 NKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCK---QNINIDEAFLTLA 172
NK D+++ V T AQ AD +S+P +E S K N +++ F+TLA
Sbjct: 117 NKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 165
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 110 bits (274), Expect = 2e-31
Identities = 63/170 (37%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
+ K+ +LGD+ VGK+ I+ RF ++++ TIG F K + + K IWDTAG
Sbjct: 3 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAG 62
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
ERFR L YYRG+ +++YD+T E+F L W+ Q+ P +V +A
Sbjct: 63 LERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWV-------RELRQHGPPSIVVAIA 115
Query: 126 GNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
GNK D+ R V +DA+ AD+ F E S K INI+E F+ ++R I
Sbjct: 116 GNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 109 bits (273), Expect = 2e-31
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 8/173 (4%)
Query: 7 TYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ 66
TYK++V+GD VGK+ + +F + + Y TI D K ++D+ L + DTAGQ
Sbjct: 4 TYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTI-EDSYLKHTEIDNQWAILDVLDTAGQ 62
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
E F + Y R G L++Y VT+ SF+H++ + + I V + +L
Sbjct: 63 EEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESF------PMILVA 116
Query: 127 NKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCK-QNINIDEAFLTLARLIREQ 178
NK D+ R V + +A Y++P+ E S K +N+D+ F L R+IR+Q
Sbjct: 117 NKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 109 bits (272), Expect = 5e-31
Identities = 40/188 (21%), Positives = 71/188 (37%), Gaps = 21/188 (11%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
QT K +V+GD VGKTC++ + + Y+ T+ D + + P L ++DTAG
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLGLFDTAG 60
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
QE + L Y L+ + V + SF+++ C P +L
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-------PKTPFLLV 113
Query: 126 GNKSDVKTQRAV------------QTKDAQMLADNY-SLPFYEVSCKQNINIDEAFLTLA 172
G + D++ + + A+ LA + ++ + E S + F
Sbjct: 114 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173
Query: 173 RLIREQTR 180
E
Sbjct: 174 LAALEPPE 181
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 108 bits (270), Expect = 9e-31
Identities = 59/171 (34%), Positives = 102/171 (59%), Gaps = 3/171 (1%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
K+++LGDS VGKT +++++ ++ + + Y +TIG DF K + +DD +QIWDTAGQE
Sbjct: 3 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 62
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
RF++L A+YRGA +L++DVT +F+ L+ W + + V+ GN
Sbjct: 63 RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP---ENFPFVVLGN 119
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
K D++ ++ + ++P++E S K+ IN+++AF T+AR +Q
Sbjct: 120 KIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 170
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 108 bits (269), Expect = 9e-31
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
Y++ V G VGK+ +V RF T+ ++YI T+ ++Q I + LQI DT G
Sbjct: 3 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSIC-TLQITDTTGSH 61
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
+F + +L+Y +T+ +S + L + I E + + +L GN
Sbjct: 62 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICE-----IKGDVESIPIMLVGN 116
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQT 179
K D R VQ+ +A+ LA + F E S K N N+ E F L L + +T
Sbjct: 117 KCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRT 168
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 108 bits (270), Expect = 9e-31
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 21/183 (11%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
Q K +V+GD VGKTC++ + + YI T+ D + +D P L +WDTAG
Sbjct: 4 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAG 62
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
QE + L Y L+ + + + SF+++ ++ P+ +L
Sbjct: 63 QEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEV-------RHHCPNTPIILV 115
Query: 126 GNKSDVKTQRAVQTK------------DAQMLADNY-SLPFYEVSCKQNINIDEAFLTLA 172
G K D++ + K +A ++ + E S + F
Sbjct: 116 GTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAI 175
Query: 173 RLI 175
R +
Sbjct: 176 RAV 178
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 107 bits (266), Expect = 2e-30
Identities = 63/174 (36%), Positives = 100/174 (57%), Gaps = 6/174 (3%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPT-KLQIWDTAGQ 66
K+++LGDS VGKT ++HR+ ++ Y Y +TIG DF K + +D +Q+WDTAGQ
Sbjct: 3 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 62
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
ERF++L A+YRGA +L+YDVTN SF+++ W ++N N+ V+ G
Sbjct: 63 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFL---VHANVNSPETFPFVILG 119
Query: 127 NKSDVKTQRAVQTK--DAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
NK D + + + ++ ++ +P + S K IN+D AF +AR +Q
Sbjct: 120 NKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 173
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 103 bits (256), Expect = 9e-29
Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 8/174 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
N+ +IL+LG GKT I++R T TIG + + KL +WD
Sbjct: 15 NKELRILILGLDGAGKTTILYRLQIG-EVVTTKPTIGFNVETLSYK----NLKLNVWDLG 69
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQ R YY ++ + D T+ + + L + + + +V
Sbjct: 70 GQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAAL---LVFAN 126
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
++ + V + + + S S + I E L +I+E+
Sbjct: 127 KQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 180
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 102 bits (254), Expect = 1e-28
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K++V+G+ VGK+ ++ R+C + Y TIG+DF ++ I ++D +L +WDTAGQE
Sbjct: 4 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 63
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
F +T AYYRGA +L++ T+ ESF+ ++ W D+ L NK
Sbjct: 64 FDAITKAYYRGAQACVLVFSTTDRESFEAISSW--------REKVVAEVGDIPTALVQNK 115
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
D+ ++ ++A+ LA L FY S K+++N+ E F LA +
Sbjct: 116 IDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 102 bits (254), Expect = 2e-28
Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 14/175 (8%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
N+ +IL+LG GKT I+++ T + + F + + +V K +WD
Sbjct: 10 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT---VGFNVETVTYKNV--KFNVWDVG 64
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQ++ R L YY G G++ + D + + L I N D + ++
Sbjct: 65 GQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRII------NDREMRDAIILI 118
Query: 125 AGNKSDVKTQR---AVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
NK D+ +Q K + + + E L +
Sbjct: 119 FANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 173
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 101 bits (252), Expect = 5e-28
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 23/190 (12%)
Query: 1 MAD--CNQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKL 58
MA K +V+GD VGKTC++ + ++ + + Y+ T+ D + + L
Sbjct: 1 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLL 59
Query: 59 QIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASP 118
++DTAGQE + L Y L+ + V N SFQ++ + +P
Sbjct: 60 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPE-------LKEYAP 112
Query: 119 DVVKVLAGNKSDVKTQRA------------VQTKDAQMLADNY-SLPFYEVSCKQNINID 165
+V +L G + D++ + + Q LA + + E S +
Sbjct: 113 NVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLK 172
Query: 166 EAFLTLARLI 175
F I
Sbjct: 173 TVFDEAIIAI 182
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 100 bits (248), Expect = 1e-27
Identities = 40/183 (21%), Positives = 75/183 (40%), Gaps = 21/183 (11%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
K++++GD GKTC++ + + + Y+ T+ + I++D +L +WDTAG E
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGLE 61
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
+ L Y DV + L+NI E ++ P+V +L GN
Sbjct: 62 DYDRLRPLSYP-------DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGN 114
Query: 128 KSDVKTQRAVQ------------TKDAQMLADNY-SLPFYEVSCKQNINIDEAFLTLARL 174
K D++ + ++ + +A+ + + E S K + E F R
Sbjct: 115 KKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRA 174
Query: 175 IRE 177
+
Sbjct: 175 ALQ 177
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 99.7 bits (247), Expect = 1e-27
Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 8/167 (4%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
+IL++G GKT I+++ T + ++ +WD GQ++
Sbjct: 2 RILMVGLDAAGKTTILYKLKLGEI-----VTTIPTIGFNVETVEYKNISFTVWDVGGQDK 56
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
R L Y++ G++ + D + E L + + K +
Sbjct: 57 IRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANK---QDL 113
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
+ + K + + + E L+ +
Sbjct: 114 PNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 97.0 bits (240), Expect = 2e-26
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
K+ + G + VGK+ +V RF + + Y T+ ++ + DD ++I DTAGQE
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATI-DDEVVSMEILDTAGQE 61
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
+ R G +L+YD+T+ SF+ + +V +L GN
Sbjct: 62 DTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKN------ILDEIKKPKNVTLILVGN 114
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQN-INIDEAFLTLARLIREQ 178
K+D+ R V T++ + LA + FYE S NI E F L R +R +
Sbjct: 115 KADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRR 166
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 95.5 bits (236), Expect = 8e-26
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 10/175 (5%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
+K++++GD GKT V R + Y++T+G++ + + P K +WDTAGQE
Sbjct: 4 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 63
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
+F L YY A ++M+DVT+ +++++ W +++ V N + VL GN
Sbjct: 64 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCEN--------IPIVLCGN 115
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQ 182
K D+K ++ N L +Y++S K N N ++ FL LAR + L+
Sbjct: 116 KVDIKDRKVKAKSIVFHRKKN--LQYYDISAKSNYNFEKPFLWLARKLIGDPNLE 168
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 92.9 bits (229), Expect = 7e-25
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
+++ KI +LG +VGK+ + +F + + D+Y TI + K+I ++ LQ+ DTA
Sbjct: 2 SKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTI-ENTFTKLITVNGQEYHLQLVDTA 60
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQ+ + Y G +L+Y VT+++SF+ + + ++ +L
Sbjct: 61 GQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIP------IML 114
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
GNK D+ +R + ++ + LA++++ F E S K+N + F +
Sbjct: 115 VGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEAE 166
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 93.2 bits (230), Expect = 7e-25
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
KI+V+GDS GKT ++H F + + + Y+ T+ + ++D +L +WDT+G
Sbjct: 4 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTV-FENYTASFEIDTQRIELSLWDTSGSPY 62
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
+ + Y + +L+ +D++ E+ + K Q P+ +L G K
Sbjct: 63 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE-------IQEFCPNTKMLLVGCK 115
Query: 129 SDVKT------------QRAVQTKDAQMLADNY-SLPFYEVSCKQNIN-IDEAFLTLARL 174
SD++T Q V +A + + E S Q+ N + + F
Sbjct: 116 SDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 175
Query: 175 I 175
Sbjct: 176 C 176
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 92.5 bits (228), Expect = 9e-25
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 8/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
YK+L+LG VGK+ + F D + + I +D L ++D Q+
Sbjct: 2 YKVLLLGAPGVGKSALARIFGGV--EDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQD 59
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
R L +++Y VT+ SF+ + + DV +L GN
Sbjct: 60 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASEL------RVQLRRARQTDDVPIILVGN 113
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
KSD+ R V + + A + F E S + N+ F + R IR +
Sbjct: 114 KSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLR 164
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 92.4 bits (228), Expect = 2e-24
Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 8/172 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
+Q +K++++G N GKT I+++F T + + I + T+ +WD
Sbjct: 13 HQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN-----TRFLMWDIG 67
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQE R+ YY ++++ D T+ E L + K
Sbjct: 68 GQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQ- 126
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
+ + T + ++ + + + ++
Sbjct: 127 --DVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRLK 176
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 91.7 bits (226), Expect = 2e-24
Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 8/171 (4%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
++L+LG N GKT I+ +F E + TI I L+ KL IWD GQ+
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGE-----DVDTISPTLGFNIKTLEHRGFKLNIWDVGGQK 57
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGN 127
R+ Y+ G++ + D + + Q L+++ + ++ +
Sbjct: 58 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGA---TLLIFANKQD 114
Query: 128 KSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+ A+Q ++ S ++ L I +
Sbjct: 115 LPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 165
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 89.7 bits (221), Expect = 1e-23
Identities = 33/180 (18%), Positives = 72/180 (40%), Gaps = 10/180 (5%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
++ VLGD+ GK+ ++HRF + Y T + +K + +D + I + AG
Sbjct: 4 PELRLGVLGDARSGKSSLIHRFLTGS-YQVLEKTESEQY-KKEMLVDGQTHLVLIREEAG 61
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
+ + A ++ ++ + + SFQ ++ + + + + V
Sbjct: 62 APDAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALAL--VGT 114
Query: 126 GNKSDVKTQRAVQTKDAQMLA-DNYSLPFYEVSCKQNINIDEAFLTLARLIREQTRLQAI 184
++ + R V A+ L D +YE +N+D F +A+ + + Q +
Sbjct: 115 QDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQL 174
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 89.2 bits (220), Expect = 2e-23
Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 14/174 (8%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
+Q +IL+LG N GKT ++ + E T G + K KL +WD
Sbjct: 14 DQEVRILLLGLDNAGKTTLLKQLASEDISHITP-TQGFNIKSVQSQ----GFKLNVWDIG 68
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
GQ + R +Y+ ++ + D + + F+ + + V ++
Sbjct: 69 GQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQE------LTELLEEEKLSCVPVLI 122
Query: 125 AGNKSDVKTQR---AVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
NK D+ T + + S + + + + +
Sbjct: 123 FANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 87.5 bits (215), Expect = 1e-22
Identities = 36/176 (20%), Positives = 72/176 (40%), Gaps = 8/176 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETY-YDTYISTIGIDFKQKIIDLDDVPTKLQIWDT 63
N Y+++++G+ VGK+ + + F D+ +G D ++ + +D + + D
Sbjct: 1 NTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDM 60
Query: 64 A-GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
+ L + L++Y +T+ SF+ + + D+
Sbjct: 61 WENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQT------EDIPI 114
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+L GNKSD+ R V + + A + F E S N+ E F + R +R +
Sbjct: 115 ILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR 170
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 83.2 bits (204), Expect = 3e-21
Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 9/169 (5%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+L LG N GKT ++H ++ ++T+ + +L K +D G +
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKND-----RLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 56
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQN---ASPDVVKVLA 125
R L Y+ GI+ + D + E F L + + + + A
Sbjct: 57 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 116
Query: 126 GNKSDVKTQ-RAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLAR 173
+++++++ + T +Q + + + S EAF L++
Sbjct: 117 VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQ 165
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 81.7 bits (200), Expect = 1e-20
Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
Query: 6 QTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAG 65
+ ++ ++G GKT V+ + + I T+G + ++ + +++WD G
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK----ITKGNVTIKLWDIGG 56
Query: 66 QERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLA 125
Q RFR++ Y RG I+ M D + E + L N+ + P +V
Sbjct: 57 QPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGI---PVLVLGNK 113
Query: 126 GNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIR 176
+ ++ + K + + Y +SCK+ NID L + +
Sbjct: 114 RDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHSK 164
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 81.7 bits (201), Expect = 4e-20
Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 13/179 (7%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
T+++L+LG GK+ IV + + T GI + +D V ++D
Sbjct: 4 RATHRLLLLGAGESGKSTIVKQMRI----LHVVLTSGIFETK--FQVDKV--NFHMFDVG 55
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNS----NQNASPDV 120
GQ R + I+ + ++ + ++E N +
Sbjct: 56 GQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTI 115
Query: 121 VKVLAGNKSDVKTQRAVQTKDA-QMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+L NK D+ ++ + K + ++ D IR++
Sbjct: 116 SVILFLNKQDLLAEKVLAGKSKIEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDE 174
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 79.8 bits (195), Expect = 9e-20
Identities = 27/174 (15%), Positives = 53/174 (30%), Gaps = 8/174 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
+ +IL+LG GKT I++R T + + K Q+WD
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEV-----VTTIPTIGFNVETVTYKNLKFQVWDLG 57
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
G R YY ++ + D + + + + + VV
Sbjct: 58 GLTSIRPYWRCYYSNTDAVIYVVDSCD---RDRIGISKSELVAMLEEEELRKAILVVFAN 114
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+ T + + ++ S + +DEA L ++ +
Sbjct: 115 KQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR 168
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 78.0 bits (191), Expect = 7e-19
Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 13/170 (7%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
KIL+LG GK+ + + T GI + ++ D GQ
Sbjct: 3 VKILLLGAGESGKSTFLKQMRII---HGQDPTKGIHEYD----FEIKNVPFKMVDVGGQR 55
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNS----NQNASPDVVKV 123
R + IL + + + + + E N +V +
Sbjct: 56 SERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSII 115
Query: 124 LAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLAR 173
L NK+D+ ++ + P ++ + E F R
Sbjct: 116 LFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQK--FLVECFRGKRR 163
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 76.9 bits (188), Expect = 2e-18
Identities = 24/201 (11%), Positives = 55/201 (27%), Gaps = 36/201 (17%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
K+L+LG GK+ + + + + T GI + ++ D GQ
Sbjct: 3 LKLLLLGTGESGKSTFIKQMRIIHG--SGVPTTGIIEYPFDLQ----SVIFRMVDVGGQR 56
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNS----NQNASPDVVKV 123
R + I+ + ++ + + +EE + +
Sbjct: 57 SERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVI 116
Query: 124 LAGNKSDVKTQRAVQTKDAQMLAD--------------------------NYSLPFYEVS 157
L NK D+ ++ + + + + + +
Sbjct: 117 LFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTC 176
Query: 158 CKQNINIDEAFLTLARLIREQ 178
NI F + I +
Sbjct: 177 ATDTENIRFVFAAVKDTILQL 197
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 75.5 bits (184), Expect = 5e-18
Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 26/186 (13%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTA 64
+T K++ LG N GKT ++H D+ +L +D
Sbjct: 11 KKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHV-----PTLHPTSEELTIAGMTFTTFDLG 65
Query: 65 GQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVL 124
G + R + Y GI+ + D + E L ++ +V ++
Sbjct: 66 GHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETI------ANVPILI 119
Query: 125 AGNKSDVKTQRAVQTKDAQMLADNYS---------------LPFYEVSCKQNINIDEAFL 169
GNK D + + + L + S + E F
Sbjct: 120 LGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFR 179
Query: 170 TLARLI 175
+A+ I
Sbjct: 180 WMAQYI 185
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 70.8 bits (172), Expect = 3e-16
Identities = 28/201 (13%), Positives = 57/201 (28%), Gaps = 39/201 (19%)
Query: 8 YKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQE 67
K+L+LG GK+ IV + T I FK +++D GQ
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHF---------KMFDVGGQR 53
Query: 68 RFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEV----GCNSNQNASPDVVKV 123
R + G I+ +++ + + + + E N D +
Sbjct: 54 SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSII 113
Query: 124 LAGNKSDVKTQRAVQTKDAQMLADNYS--------------------------LPFYEVS 157
L NK D+ ++ ++ + + +
Sbjct: 114 LFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC 173
Query: 158 CKQNINIDEAFLTLARLIREQ 178
N+ F + +I +
Sbjct: 174 ATDTKNVQFVFDAVTDVIIKN 194
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 68.1 bits (165), Expect = 5e-15
Identities = 21/158 (13%), Positives = 53/158 (33%), Gaps = 4/158 (2%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
+L +G + GKT + R Y DT ++I ++ + + I +
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLTGQYRDTQ-TSITDSSAIYKVNNNRGNSLTLIDLPGHESL 60
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
L + A ++ + D + + + +N+ ++A NK
Sbjct: 61 RFQLLDRFKSSARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPS---LLIACNK 117
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDE 166
D+ ++ + Q+ + +L + ++
Sbjct: 118 QDIAMAKSAKLIQQQLEKELNTLRVTRSAAPSTLDSSS 155
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 47.4 bits (111), Expect = 9e-08
Identities = 20/158 (12%), Positives = 42/158 (26%), Gaps = 8/158 (5%)
Query: 9 KILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQER 68
K+++ G N GK+ +++ G + L I DTAG
Sbjct: 3 KVVIAGRPNAGKSSLLNALAGREAAIVT-DIAGTTRDVLREHIHIDGMPLHIIDTAGLRE 61
Query: 69 FRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNK 128
+ L + E+ + + NK
Sbjct: 62 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNK 121
Query: 129 SDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDE 166
+D+ T + +++ +S + +D
Sbjct: 122 ADI-------TGETLGMSEVNGHALIRLSARTGEGVDV 152
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 47.7 bits (112), Expect = 1e-07
Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 12/170 (7%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
I++ G N GKT ++ ++ T+ D D L + + R+
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTDSVR----PTVVSQEPLSAADYDGSGVTLVDFPGHVKLRY 61
Query: 70 RTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNKS 129
+ R L++ V + + L + + ++ + + + ++A NKS
Sbjct: 62 KLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDILIACNKS 121
Query: 130 DVKTQRAVQTKDAQMLAD--------NYSLPFYEVSCKQNINIDEAFLTL 171
++ T R + ++ SL E + + L
Sbjct: 122 ELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVL 171
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 39.8 bits (91), Expect = 5e-05
Identities = 19/168 (11%), Positives = 41/168 (24%), Gaps = 9/168 (5%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETY------YDTYISTIGIDFKQKIIDLDDVPTKL 58
+ ++ G SN GK+ ++ ++ I + L D+P
Sbjct: 14 DTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYG 73
Query: 59 QIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASP 118
+R Y L V + + IE ++
Sbjct: 74 YAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVL 133
Query: 119 DVVKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDE 166
+ + V+ D + S + +D+
Sbjct: 134 LTKADKLASGARKAQLNMVREAVLAFNGD---VQVETFSSLKKQGVDK 178
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 39.2 bits (90), Expect = 8e-05
Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 14/174 (8%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYY--DTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ- 66
+ ++G N GK+ ++ +T+ + + ++ + + D G
Sbjct: 4 VGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEE---RFTLADIPGII 60
Query: 67 ---ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKV 123
+ L + R ++ V + E + P +V +
Sbjct: 61 EGASEGKGLGLEFLRHIARTRVLLYVLDAADEPLKTLETLRKEVGAYDPALLRRPSLVAL 120
Query: 124 LAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
NK D+ + AV+ + + VS + L L+R
Sbjct: 121 ---NKVDLLEEEAVKALADALAREGL--AVLPVSALTGAGLPALKEALHALVRS 169
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 38.9 bits (89), Expect = 1e-04
Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 13/182 (7%)
Query: 10 ILVLGDSNVGKTCIVHRFCDE---------TYYDTYISTIGIDFKQKIIDLDDVPTKLQI 60
I+ G SNVGK+ +++R + + + +
Sbjct: 3 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEIEWKNHKIIDMPGFGFMMGLPKE 62
Query: 61 WDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDV 120
++ + +L+ D I D+
Sbjct: 63 VQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIPIDVEFYQFLRELDI 122
Query: 121 VKVLAGNKSD-VKTQRAVQTKDAQMLADNYSL---PFYEVSCKQNINIDEAFLTLARLIR 176
++A NK D +K + V A+ S F +S K NI+ + +IR
Sbjct: 123 PTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLKNRIFEVIR 182
Query: 177 EQ 178
E+
Sbjct: 183 ER 184
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 37.8 bits (86), Expect = 2e-04
Identities = 24/168 (14%), Positives = 55/168 (32%), Gaps = 3/168 (1%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
I ++G NVGK+ ++++ + T + I + + DT G
Sbjct: 8 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIY-VDTPGLHME 66
Query: 70 RTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNKS 129
+ DV + W + E V + +P ++ V
Sbjct: 67 EKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVN--KVD 124
Query: 130 DVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
+V+ + + + + L +S + +N+D + + + E
Sbjct: 125 NVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPE 172
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 37.8 bits (86), Expect = 3e-04
Identities = 20/169 (11%), Positives = 45/169 (26%), Gaps = 2/169 (1%)
Query: 9 KILVLGDSNVGKTCIVHRFC--DETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQ 66
+I + G SNVGK+ ++ + II+ + + + A
Sbjct: 25 EIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKV 84
Query: 67 ERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAG 126
+ ++ + + ++ P +V
Sbjct: 85 SKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKA 144
Query: 127 NKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLI 175
+K Q L + S + DEA+ + ++I
Sbjct: 145 DKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMI 193
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 37.4 bits (85), Expect = 4e-04
Identities = 19/168 (11%), Positives = 41/168 (24%), Gaps = 4/168 (2%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
+ ++G NVGK+ +++ K+ L + ++ DT G +
Sbjct: 8 VAIVGKPNVGKSTLLNNLLGVKVAPIS-PRPQTTRKRLRGILTEGRRQIVFVDTPGLHKP 66
Query: 70 RTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNKS 129
+ + L + + E V + ++
Sbjct: 67 MDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLD 126
Query: 130 DVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
K +S + E L L+ E
Sbjct: 127 AAKYPEEAM---KAYHELLPEAEPRMLSALDERQVAELKADLLALMPE 171
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 36.1 bits (82), Expect = 0.001
Identities = 22/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
+ ++G +VGK+ ++ + +++ DD + D G
Sbjct: 4 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDD-GRSFVMADLPGLIEG 62
Query: 70 RTL-------TTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVK 122
+ I+ + D++ LE + + + + +
Sbjct: 63 AHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDY--LTINQELSEYNLRLTERPQ 120
Query: 123 VLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIRE 177
++ NK D+ + L D+Y P + +S + E +A +
Sbjct: 121 IIVANKMDMPEAAENLEAFKEKLTDDY--PVFPISAVTREGLRELLFEVANQLEN 173
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 36.2 bits (82), Expect = 0.001
Identities = 22/173 (12%), Positives = 45/173 (26%), Gaps = 17/173 (9%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDET-----------YYDTYISTIGIDFKQKIIDLDD 53
K+ ++G NVGK+ + + ++ K +D
Sbjct: 6 TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVFVDTAG 65
Query: 54 VPTKLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSN 113
+ K ++ ++ A ++++ D T + Q +
Sbjct: 66 LRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRASVV 125
Query: 114 QNASPDVVKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDE 166
D+V K + L P S + NID
Sbjct: 126 VFNKWDLV------VHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDR 172
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 33.4 bits (75), Expect = 0.006
Identities = 22/179 (12%), Positives = 56/179 (31%), Gaps = 28/179 (15%)
Query: 9 KILVLGDSNVGKTCIVHRFC--------DETYYDTYISTIGIDFKQKIIDLDDVPTKLQI 60
+++++G NVGK+ +++R D + + I + + + D
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRGILFRIVDTAGVRSE 61
Query: 61 WDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDV 120
+ + T A +L + D ++ + + +
Sbjct: 62 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLV--------- 112
Query: 121 VKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQT 179
NK DV + + ++ D ++S + +++ L I +T
Sbjct: 113 ----VINKVDVVEKINEEEIKNKLGTDR---HMVKISALKGEGLEK----LEESIYRET 160
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 32.8 bits (73), Expect = 0.010
Identities = 24/169 (14%), Positives = 51/169 (30%), Gaps = 5/169 (2%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
+L++G NVGK+ + ++ + + + + D + K
Sbjct: 3 VLIVGRPNVGKSTLFNKLVKKK--KAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFD 60
Query: 70 RTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNKS 129
+ L M +L F E+ S ++A
Sbjct: 61 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLADFLRKSTVDTILVANKAE 120
Query: 130 DVKTQRAVQTKDAQMLADNYSLPFYEVSCKQNINIDEAFLTLARLIREQ 178
+++ + L VS + NIN+D T+ + + E+
Sbjct: 121 NLREFEREVKPELYSLGFG---EPIPVSAEHNINLDTMLETIIKKLEEK 166
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 30.5 bits (68), Expect = 0.12
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 4/87 (4%)
Query: 5 NQTYKILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVP--TKLQIWD 62
+ + V G++ GK+ ++ + + G+ P + WD
Sbjct: 54 SSVLNVAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVFWD 113
Query: 63 TAGQERFRTLTTAYYRGAMGILLMYDV 89
G Y YD
Sbjct: 114 LPGIGSTNFPPDTYL--EKMKFYEYDF 138
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 26.6 bits (58), Expect = 2.1
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 18/50 (36%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQ 59
+++G+ VGKT IV Q+I+ DVP L+
Sbjct: 46 PVLIGEPGVGKTAIVEGLA-----------------QRIVK-GDVPEGLK 77
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 26.1 bits (56), Expect = 2.3
Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 4/128 (3%)
Query: 39 TIGIDFKQKIIDLDDVPTKLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHL 98
T D ++ D G E + G +L+
Sbjct: 69 TEPSCKSCGSDDEPKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQT 128
Query: 99 NYWLKNIEEVGCNSNQNASPDVVKVLAGNKSDVKTQRAVQTKDAQMLADNYSLPFYEVSC 158
+ +G + V V + + R ++ A+N +P VS
Sbjct: 129 REHFVALGIIGVKNLIIVQNKVDVV--SKEEALSQYRQIKQFTKGTWAEN--VPIIPVSA 184
Query: 159 KQNINIDE 166
INID
Sbjct: 185 LHKINIDS 192
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 26.2 bits (56), Expect = 2.4
Identities = 12/50 (24%), Positives = 19/50 (38%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQ 59
LVLG GK+ I+ +E + ++ I D +LQ
Sbjct: 32 TLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDFLLELQ 81
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase,
ADC {Escherichia coli [TaxId: 562]}
Length = 118
Score = 25.0 bits (55), Expect = 3.6
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 36 YISTIGIDFKQKIIDLDDVPT--KLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNL 92
Y + ID Q +D + + IW+ +RF T A RG+ I + +
Sbjct: 22 YEGSCAID--QDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHC 78
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 25.4 bits (55), Expect = 4.9
Identities = 11/83 (13%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 9 KILVLGDSNVGKTCIVH---RFCDETYYDTYISTIGID-FKQKIIDLDDVPTKLQIWDTA 64
+ L++ GKT ++ + + D + + ID +++ ++ + + T
Sbjct: 45 RGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTF 104
Query: 65 GQERFRTLTTAYYRGAMGILLMY 87
+ R + A L+
Sbjct: 105 DEPASRHVQVAEMVIEKAKRLVE 127
>d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 86
Score = 24.1 bits (52), Expect = 5.9
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 43 DFKQKIIDLDDVPTKLQIWDTAGQERFRTLTTAYY 77
K KI + +P Q G + + AYY
Sbjct: 36 VIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYY 70
>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 148
Score = 24.6 bits (53), Expect = 6.3
Identities = 19/141 (13%), Positives = 38/141 (26%), Gaps = 20/141 (14%)
Query: 5 NQTYKILVLGDSNVGKTC----IVHRFCDETYYDTYISTIGIDFKQ-----KIIDLDDVP 55
N +++V+G VG + + DE + I K+ V
Sbjct: 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVD 63
Query: 56 TKLQIWDTAGQERFRTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQN 115
+D + + T L+ ++I E
Sbjct: 64 IWHGDYDDCRDADLVVICAGANQ-------KPGETRLDLVDKNIAIFRSIVESVM----A 112
Query: 116 ASPDVVKVLAGNKSDVKTQRA 136
+ + ++A N D+ T
Sbjct: 113 SGFQGLFLVATNPVDILTYAT 133
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 24.3 bits (51), Expect = 8.0
Identities = 20/160 (12%), Positives = 43/160 (26%), Gaps = 6/160 (3%)
Query: 10 ILVLGDSNVGKTCIVHRFCDETYYDTYISTIGIDFKQKIIDLDDVPTKLQIWDTAGQERF 69
+ + G + GKT + T + + + QK D+ +
Sbjct: 8 LGIFGHIDHGKTTLSKVL---TEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLV 64
Query: 70 RTLTTAYYRGAMGILLMYDVTNLESFQHLNYWLKNIEEVGCNSNQNASPDVVKVLAGNKS 129
A A+ L E + P +V + + +
Sbjct: 65 DAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLILDHFNIPIIVVITKSDNA 124
Query: 130 DVKTQRAVQTKDAQMLADNYSL---PFYEVSCKQNINIDE 166
+ + + +L ++L +S K +DE
Sbjct: 125 GTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDE 164
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 673,893
Number of extensions: 28984
Number of successful extensions: 278
Number of sequences better than 10.0: 1
Number of HSP's gapped: 202
Number of HSP's successfully gapped: 86
Length of query: 184
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 104
Effective length of database: 1,309,196
Effective search space: 136156384
Effective search space used: 136156384
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.7 bits)