Query psy12932
Match_columns 107
No_of_seqs 140 out of 1451
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 23:27:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12932hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ga1_A Nucleus accumbens-assoc 99.5 1E-14 3.5E-19 88.7 4.0 62 2-63 1-62 (129)
2 3fkc_A Transcriptional regulat 99.5 1E-14 3.4E-19 87.5 3.7 59 5-63 2-60 (116)
3 2ihc_A Transcription regulator 99.5 1.4E-14 4.9E-19 87.6 3.6 56 8-63 3-58 (124)
4 2z8h_A Transcription regulator 99.5 1.3E-14 4.5E-19 89.3 2.3 58 6-63 8-65 (138)
5 3ohu_A Transcription regulator 99.4 5.1E-14 1.7E-18 85.1 3.9 58 6-63 4-61 (125)
6 3b84_A Zinc finger and BTB dom 99.4 3.9E-14 1.3E-18 85.1 3.1 52 12-63 2-53 (119)
7 1buo_A POZ domain, protein (pr 99.4 4.7E-14 1.6E-18 84.9 3.4 55 9-63 3-57 (121)
8 2if5_A Zinc finger and BTB dom 99.4 1.7E-13 5.7E-18 82.3 4.1 53 11-63 2-54 (120)
9 2q81_A MIZ-1 protein; BTB/POZ 99.4 1.3E-13 4.3E-18 82.9 3.1 54 10-63 3-56 (119)
10 1r29_A B-cell lymphoma 6 prote 99.4 9.2E-14 3.1E-18 84.2 2.1 55 9-63 4-58 (127)
11 2yy9_A Zinc finger and BTB dom 99.4 5.8E-13 2E-17 81.6 5.1 51 13-63 4-54 (135)
12 2ppi_A Gigaxonin; BTB domain, 99.4 8.7E-14 3E-18 86.3 1.0 57 7-63 20-76 (144)
13 2vpk_A Myoneurin; transcriptio 99.3 2.2E-13 7.5E-18 81.3 1.4 50 14-63 2-51 (116)
14 3i3n_A Kelch-like protein 11; 99.3 2.1E-12 7.3E-17 87.4 4.8 56 8-63 6-64 (279)
15 3hve_A Gigaxonin; ubiquitin, c 99.3 5.1E-13 1.7E-17 89.4 1.4 59 5-63 2-60 (256)
16 3m5b_A Zinc finger and BTB dom 99.2 1.8E-11 6.1E-16 73.6 5.2 68 10-79 8-84 (119)
17 3b84_A Zinc finger and BTB dom 99.2 3.2E-12 1.1E-16 76.6 -0.1 44 64-107 8-51 (119)
18 2ihc_A Transcription regulator 99.1 3.6E-12 1.2E-16 76.9 -0.3 44 64-107 13-56 (124)
19 2z8h_A Transcription regulator 99.1 4.9E-12 1.7E-16 77.7 -0.1 44 64-107 20-63 (138)
20 2vpk_A Myoneurin; transcriptio 99.1 5.1E-12 1.7E-16 75.3 -0.1 44 64-107 6-49 (116)
21 2q81_A MIZ-1 protein; BTB/POZ 99.1 5.5E-12 1.9E-16 75.6 -0.1 44 64-107 11-54 (119)
22 1buo_A POZ domain, protein (pr 99.1 5.1E-12 1.7E-16 75.9 -0.3 44 64-107 12-55 (121)
23 3ohu_A Transcription regulator 99.1 6E-12 2E-16 75.9 -0.3 44 64-107 16-59 (125)
24 2yy9_A Zinc finger and BTB dom 99.1 7.1E-12 2.4E-16 76.7 -0.0 44 64-107 9-52 (135)
25 3fkc_A Transcriptional regulat 99.1 7.3E-12 2.5E-16 74.9 -0.1 44 64-107 15-58 (116)
26 1r29_A B-cell lymphoma 6 prote 99.1 8.9E-12 3.1E-16 75.3 -0.0 44 64-107 13-56 (127)
27 2if5_A Zinc finger and BTB dom 99.1 9.7E-12 3.3E-16 74.4 -0.0 44 64-107 9-52 (120)
28 3m5b_A Zinc finger and BTB dom 99.1 3.4E-11 1.2E-15 72.3 2.3 40 66-107 18-57 (119)
29 3ga1_A Nucleus accumbens-assoc 99.1 1.5E-11 5E-16 74.7 -0.3 44 64-107 17-60 (129)
30 2ppi_A Gigaxonin; BTB domain, 99.0 1.1E-11 3.9E-16 76.6 -1.0 44 64-107 31-74 (144)
31 4eoz_A Speckle-type POZ protei 99.0 9E-11 3.1E-15 72.0 2.6 48 16-63 7-54 (145)
32 3htm_A Speckle-type POZ protei 99.0 6.4E-11 2.2E-15 74.6 1.9 51 13-63 13-63 (172)
33 3i3n_A Kelch-like protein 11; 99.0 9E-11 3.1E-15 79.4 1.6 44 64-107 16-62 (279)
34 4eoz_A Speckle-type POZ protei 99.0 6.2E-11 2.1E-15 72.8 -0.1 44 64-107 9-52 (145)
35 3htm_A Speckle-type POZ protei 98.9 1.5E-10 5.1E-15 72.9 -0.3 44 64-107 18-61 (172)
36 3hve_A Gigaxonin; ubiquitin, c 98.9 1.5E-10 5.1E-15 77.4 -1.0 44 64-107 15-58 (256)
37 3hqi_A Speckle-type POZ protei 98.8 8.7E-10 3E-14 75.5 1.8 44 64-107 158-201 (312)
38 3hqi_A Speckle-type POZ protei 98.8 2.8E-09 9.6E-14 73.0 2.8 47 17-63 157-203 (312)
39 2vkp_A BTB/POZ domain-containi 98.7 1.1E-09 3.7E-14 64.3 0.1 36 28-63 2-41 (109)
40 2vkp_A BTB/POZ domain-containi 97.2 9.3E-06 3.2E-10 47.1 -3.1 19 89-107 21-39 (109)
41 4ajy_C Transcription elongatio 94.0 0.014 4.8E-07 33.2 0.7 26 37-63 4-30 (97)
42 2ast_A S-phase kinase-associat 89.5 0.087 3E-06 32.5 0.5 26 37-63 3-29 (159)
43 1fs1_B SKP1, cyclin A/CDK2-ass 71.3 1.8 6.1E-05 26.0 1.5 26 37-63 4-30 (141)
44 2p1m_A SKP1-like protein 1A; F 54.4 1.5 5E-05 27.0 -1.2 26 37-63 6-32 (160)
45 2fnj_C Transcription elongatio 41.5 7.9 0.00027 21.5 0.7 26 37-63 3-29 (96)
46 1hv2_A Elongin C, ELC1; protei 41.4 10 0.00035 21.2 1.1 26 37-63 6-32 (99)
47 1o6d_A Hypothetical UPF0247 pr 22.0 99 0.0034 19.0 3.3 24 18-43 80-103 (163)
48 1ns5_A Hypothetical protein YB 20.3 99 0.0034 18.8 3.0 24 18-43 81-104 (155)
No 1
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.51 E-value=1e-14 Score=88.75 Aligned_cols=62 Identities=27% Similarity=0.425 Sum_probs=54.7
Q ss_pred CcccCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 2 AAITTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|+..+.+.+.++++++...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 1 gp~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~ 62 (129)
T 3ga1_A 1 GPLGSAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDL 62 (129)
T ss_dssp ------CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred CCCCCCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHH
Confidence 35567789999999999999999999999999999999999999999999999999999877
No 2
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.50 E-value=1e-14 Score=87.49 Aligned_cols=59 Identities=27% Similarity=0.307 Sum_probs=54.9
Q ss_pred cCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 5 TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
++++.+.+.+++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 2 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~ 60 (116)
T 3fkc_A 2 ESRKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQL 60 (116)
T ss_dssp --CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CcCceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999887
No 3
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.49 E-value=1.4e-14 Score=87.61 Aligned_cols=56 Identities=29% Similarity=0.466 Sum_probs=54.2
Q ss_pred ceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 8 TNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
+.+.++++.|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~m 58 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSR 58 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999987
No 4
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.47 E-value=1.3e-14 Score=89.26 Aligned_cols=58 Identities=28% Similarity=0.448 Sum_probs=55.1
Q ss_pred CCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 6 TGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
..+.+.+.++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 8 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~ 65 (138)
T 2z8h_A 8 ESAVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSR 65 (138)
T ss_dssp TTCCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CCCeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHH
Confidence 4577889999999999999999999999999999999999999999999999999987
No 5
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.45 E-value=5.1e-14 Score=85.11 Aligned_cols=58 Identities=26% Similarity=0.357 Sum_probs=54.9
Q ss_pred CCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 6 TGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
......+++++|...+++.|+++++++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 4 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~ 61 (125)
T 3ohu_A 4 GSPMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQA 61 (125)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHH
T ss_pred CCcceeeecHHHHHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHH
Confidence 3467899999999999999999999999999999999999999999999999999877
No 6
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.44 E-value=3.9e-14 Score=85.11 Aligned_cols=52 Identities=31% Similarity=0.451 Sum_probs=49.6
Q ss_pred EEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 12 MKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 12 ~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
++|++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 2 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~ 53 (119)
T 3b84_A 2 MSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSL 53 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHH
Confidence 5678999999999999999999999999999999999999999999999877
No 7
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.44 E-value=4.7e-14 Score=84.93 Aligned_cols=55 Identities=20% Similarity=0.347 Sum_probs=52.4
Q ss_pred eEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
...++++.|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 3 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~ 57 (121)
T 1buo_A 3 MIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEIL 57 (121)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHH
T ss_pred ceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHH
Confidence 4668899999999999999999999999999999999999999999999999977
No 8
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.41 E-value=1.7e-13 Score=82.26 Aligned_cols=53 Identities=23% Similarity=0.425 Sum_probs=50.4
Q ss_pred EEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 11 CMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 11 ~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
.++|++|.+.+++.+++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 2 ~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~ 54 (120)
T 2if5_A 2 GIPFPDHSSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKL 54 (120)
T ss_dssp CCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CcCccchHHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHH
Confidence 35788999999999999999999999999999999999999999999999877
No 9
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.39 E-value=1.3e-13 Score=82.85 Aligned_cols=54 Identities=24% Similarity=0.437 Sum_probs=49.6
Q ss_pred EEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
..+.+++|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~ 56 (119)
T 2q81_A 3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKML 56 (119)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHH
Confidence 345678899999999999999999999999999999999999999999999987
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.39 E-value=9.2e-14 Score=84.19 Aligned_cols=55 Identities=22% Similarity=0.391 Sum_probs=51.7
Q ss_pred eEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 9 NFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
...++++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 4 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~ 58 (127)
T 1r29_A 4 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSI 58 (127)
T ss_dssp -CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CccccchhHHHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999877
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.37 E-value=5.8e-13 Score=81.64 Aligned_cols=51 Identities=29% Similarity=0.378 Sum_probs=46.9
Q ss_pred EeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 13 KWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 13 ~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
.+++|...+++.|+++++++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~m 54 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRI 54 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHT
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHH
Confidence 467899999999999999999999999999999999999999999999987
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.36 E-value=8.7e-14 Score=86.26 Aligned_cols=57 Identities=19% Similarity=0.267 Sum_probs=51.9
Q ss_pred CceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 7 GTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
-+.+.+.++++...+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~m 76 (144)
T 2ppi_A 20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTK 76 (144)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHH
Confidence 356788999999999999999999999999999999999999999999999999977
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.33 E-value=2.2e-13 Score=81.33 Aligned_cols=50 Identities=24% Similarity=0.281 Sum_probs=47.4
Q ss_pred eCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 14 WQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 14 ~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
.++|+..+++.|++++.++.+|||++.++++.|+|||.||+++|+||+++
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~ 51 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAI 51 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHH
Confidence 35789999999999999999999999999999999999999999999876
No 14
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.30 E-value=2.1e-12 Score=87.41 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=53.0
Q ss_pred ceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeC---CeEEeecceeeeccCcccccc
Q psy12932 8 TNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAE---GEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~---~~~~~~h~~vl~~~s~~f~~~ 63 (107)
+...|.+++|+..+++.|+++|.++.+|||++.++ |+.|+|||.||+++|+||++|
T Consensus 6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~m 64 (279)
T 3i3n_A 6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPL 64 (279)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGG
T ss_pred cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHH
Confidence 57889999999999999999999999999999998 899999999999999999988
No 15
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.29 E-value=5.1e-13 Score=89.43 Aligned_cols=59 Identities=19% Similarity=0.267 Sum_probs=48.1
Q ss_pred cCCceEEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 5 TTGTNFCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
+|++...+.++.|...+++.|++++.++.+|||++.++++.|+|||.||+++|+||++|
T Consensus 2 s~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~m 60 (256)
T 3hve_A 2 SMAEGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTK 60 (256)
T ss_dssp --------CCTTTHHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHT
T ss_pred CCCCCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999987
No 16
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.21 E-value=1.8e-11 Score=73.59 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=52.8
Q ss_pred EEEEeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc---------chhhHHHHHHHhhhCc
Q psy12932 10 FCMKWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF---------QVHLAFELYQLLKMES 79 (107)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~---------~~~~~~~l~~l~~~~~ 79 (107)
.....+.+...+++.|+ |.++.+|||++.++++.|+|||.||+++|+||++. ....++.+-++.+++.
T Consensus 8 ~~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~~~~i~l~~v~~~~f~~ll~fiYtg~ 84 (119)
T 3m5b_A 8 IRLPSPYGSDRLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQWALGEGISPSTFAQLLNFVYGES 84 (119)
T ss_dssp EEECCTTTTCHHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCCCEEEECCSSCCHHHHHHHHHHHTTCC
T ss_pred CCCCCCcchHHHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhcCCCEEEeCCCCHHHHHHHHHHHcCCC
Confidence 34445667788888886 67799999999999999999999999999999865 3444555555555553
No 17
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.15 E-value=3.2e-12 Score=76.64 Aligned_cols=44 Identities=34% Similarity=0.457 Sum_probs=40.9
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 8 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 51 (119)
T 3b84_A 8 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 51 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHH
Confidence 45678889999999999999999999999999999999999985
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.14 E-value=3.6e-12 Score=76.92 Aligned_cols=44 Identities=34% Similarity=0.592 Sum_probs=41.3
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~ 56 (124)
T 2ihc_A 13 STNVLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFH 56 (124)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred HHHHHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHH
Confidence 55688899999999999999999999999999999999999985
No 19
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.13 E-value=4.9e-12 Score=77.65 Aligned_cols=44 Identities=34% Similarity=0.594 Sum_probs=41.6
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 20 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 63 (138)
T 2z8h_A 20 STNVLLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFH 63 (138)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHH
Confidence 56788899999999999999999999999999999999999985
No 20
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.13 E-value=5.1e-12 Score=75.33 Aligned_cols=44 Identities=27% Similarity=0.311 Sum_probs=40.7
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 6 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~ 49 (116)
T 2vpk_A 6 CEHLLERLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFG 49 (116)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHH
Confidence 34678889999999999999999999999999999999999985
No 21
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.12 E-value=5.5e-12 Score=75.61 Aligned_cols=44 Identities=30% Similarity=0.514 Sum_probs=41.0
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
...+.+.+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 11 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~ 54 (119)
T 2q81_A 11 SQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFK 54 (119)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHH
Confidence 45678889999999999999999999999999999999999985
No 22
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.12 E-value=5.1e-12 Score=75.94 Aligned_cols=44 Identities=25% Similarity=0.457 Sum_probs=41.2
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+++++.++.+|||++.++|+.|+|||.||+++||||+
T Consensus 12 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 55 (121)
T 1buo_A 12 PTGLLCKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFE 55 (121)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHH
Confidence 55688899999999999999999999999999999999999985
No 23
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.11 E-value=6e-12 Score=75.92 Aligned_cols=44 Identities=34% Similarity=0.499 Sum_probs=41.4
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
...+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 16 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 59 (125)
T 3ohu_A 16 CTNILLGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFW 59 (125)
T ss_dssp HHHHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred HHHHHHHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHH
Confidence 56788899999999999999999999999999999999999984
No 24
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.11 E-value=7.1e-12 Score=76.74 Aligned_cols=44 Identities=34% Similarity=0.457 Sum_probs=40.9
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
...+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 52 (135)
T 2yy9_A 9 SVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQ 52 (135)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHH
Confidence 34678899999999999999999999999999999999999985
No 25
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.10 E-value=7.3e-12 Score=74.88 Aligned_cols=44 Identities=36% Similarity=0.415 Sum_probs=41.1
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
...+...+++++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 15 ~~~l~~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~ 58 (116)
T 3fkc_A 15 SGSLLNSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFH 58 (116)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHH
Confidence 45688889999999999999999999999999999999999984
No 26
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.09 E-value=8.9e-12 Score=75.34 Aligned_cols=44 Identities=27% Similarity=0.438 Sum_probs=41.2
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 13 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~ 56 (127)
T 1r29_A 13 ASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFY 56 (127)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHH
Confidence 56688899999999999999999999999999999999999984
No 27
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.09 E-value=9.7e-12 Score=74.44 Aligned_cols=44 Identities=27% Similarity=0.449 Sum_probs=40.9
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
++.+...+.+++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~ 52 (120)
T 2if5_A 9 SSDILSGLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFK 52 (120)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHH
Confidence 45678889999999999999999999999999999999999984
No 28
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.08 E-value=3.4e-11 Score=72.34 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=34.7
Q ss_pred hhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 66 HLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 66 ~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
.+++.++ +.++.+|||++.++|+.|+|||+|||++|+||+
T Consensus 18 ~~l~~l~--r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 57 (119)
T 3m5b_A 18 RLVQLAA--RLRPALCDTLITVGSQEFPAHSLVLAGVSQQLG 57 (119)
T ss_dssp HHHHHHH--HHTTTTCCEEEEETTEEEEECHHHHHTTCGGGC
T ss_pred HHHHHHH--HhcCCCcceEEEECCEEEeeEHHHHHHcCHHHh
Confidence 3455554 567899999999999999999999999999996
No 29
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.05 E-value=1.5e-11 Score=74.65 Aligned_cols=44 Identities=32% Similarity=0.424 Sum_probs=41.1
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
...+...++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 17 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~ 60 (129)
T 3ga1_A 17 GNSILECLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFR 60 (129)
T ss_dssp HHHHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHH
Confidence 45688889999999999999999999999999999999999985
No 30
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.05 E-value=1.1e-11 Score=76.64 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=39.4
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 31 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~ 74 (144)
T 2ppi_A 31 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIR 74 (144)
T ss_dssp HHHHHHHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHH
Confidence 56788899999999999999999999999999999999999995
No 31
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.03 E-value=9e-11 Score=72.03 Aligned_cols=48 Identities=38% Similarity=0.475 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 16 NFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 16 ~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
.+++.+.+.++.++.++.+|||++.++++.|++||.||+++|+||+++
T Consensus 7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~ 54 (145)
T 4eoz_A 7 VPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM 54 (145)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHH
Confidence 345678999999999999999999999999999999999999999887
No 32
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.03 E-value=6.4e-11 Score=74.60 Aligned_cols=51 Identities=35% Similarity=0.430 Sum_probs=46.6
Q ss_pred EeCchHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 13 KWQNFQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 13 ~~~~~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
.+..+++.+.+.|++++.++.+|||++.++++.|++||.||+++|+||+++
T Consensus 13 ~~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~ 63 (172)
T 3htm_A 13 MVKVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM 63 (172)
T ss_dssp CSCCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHH
Confidence 344566779999999999999999999999999999999999999999887
No 33
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.99 E-value=9e-11 Score=79.40 Aligned_cols=44 Identities=27% Similarity=0.466 Sum_probs=40.3
Q ss_pred chhhHHHHHHHhhhCccccEEEEEC---CeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAE---GEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~---g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.++.++.++.+|||++.++ |+.|+|||.||+++|+||+
T Consensus 16 ~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~ 62 (279)
T 3i3n_A 16 CSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFT 62 (279)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSG
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHH
Confidence 5678889999999999999999998 9999999999999999995
No 34
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=98.96 E-value=6.2e-11 Score=72.76 Aligned_cols=44 Identities=41% Similarity=0.553 Sum_probs=41.1
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
++.+...+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 9 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~ 52 (145)
T 4eoz_A 9 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS 52 (145)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred hHHHHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHH
Confidence 45688899999999999999999999999999999999999985
No 35
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=98.89 E-value=1.5e-10 Score=72.91 Aligned_cols=44 Identities=41% Similarity=0.553 Sum_probs=40.9
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
++.+...+..++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 18 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~ 61 (172)
T 3htm_A 18 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS 61 (172)
T ss_dssp CCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHH
Confidence 45578889999999999999999999999999999999999995
No 36
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.86 E-value=1.5e-10 Score=77.39 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=39.2
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
+..+.+.++.++.++.+|||++.++|+.|+|||.||+++|+||+
T Consensus 15 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~ 58 (256)
T 3hve_A 15 AARLLRALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIR 58 (256)
T ss_dssp HHHHHHHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHH
Confidence 45688899999999999999999999999999999999999995
No 37
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.83 E-value=8.7e-10 Score=75.50 Aligned_cols=44 Identities=41% Similarity=0.553 Sum_probs=41.2
Q ss_pred chhhHHHHHHHhhhCccccEEEEECCeEEeeeeEEEeccCCCCC
Q psy12932 64 QVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 64 ~~~~~~~l~~l~~~~~~~Dv~l~~~g~~f~~hr~vLaa~s~~f~ 107 (107)
++.+...+..++.++.++||++.++|+.|+|||.|||++||||+
T Consensus 158 ~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~ 201 (312)
T 3hqi_A 158 ECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFS 201 (312)
T ss_dssp CCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHH
T ss_pred CchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHH
Confidence 55688899999999999999999999999999999999999984
No 38
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=98.77 E-value=2.8e-09 Score=72.96 Aligned_cols=47 Identities=38% Similarity=0.500 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHhCCCeeeEEEEeCCeEEeecceeeeccCcccccc
Q psy12932 17 FQVHLAFELYQLLKMESMVDVTLKAEGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 17 ~~~~~~~~l~~l~~~~~~~Dv~~~~~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
++..+.+.+.+++.++.++||++.++++.|+|||.||+++||||+++
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~ 203 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAM 203 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHH
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHH
Confidence 34568899999999999999999999999999999999999999887
No 39
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=98.74 E-value=1.1e-09 Score=64.29 Aligned_cols=36 Identities=25% Similarity=0.412 Sum_probs=33.5
Q ss_pred HHhCCCeeeEEEEeCC----eEEeecceeeeccCcccccc
Q psy12932 28 LLKMESMVDVTLKAEG----EAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 28 l~~~~~~~Dv~~~~~~----~~~~~h~~vl~~~s~~f~~~ 63 (107)
+++++.+|||++.+++ +.|++||.||+++|+||+++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~ 41 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAM 41 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHH
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHH
Confidence 5678999999999998 89999999999999999977
No 40
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=97.22 E-value=9.3e-06 Score=47.14 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=17.5
Q ss_pred CeEEeeeeEEEeccCCCCC
Q psy12932 89 GEAFQAHRIILSASSPFFQ 107 (107)
Q Consensus 89 g~~f~~hr~vLaa~s~~f~ 107 (107)
++.|+|||.||+++|+||+
T Consensus 21 ~~~~~~Hk~iLa~~S~~F~ 39 (109)
T 2vkp_A 21 TRTVPAHKYVLAVGSSVFY 39 (109)
T ss_dssp CEEEEECHHHHHHHCHHHH
T ss_pred cEEEEeeHHHHHHcCHHHH
Confidence 4899999999999999985
No 41
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=94.00 E-value=0.014 Score=33.17 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=22.3
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|++||.+ +.+|++|++|
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m 30 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAM 30 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHH
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHH
Confidence 56665 67899999999 9999999877
No 42
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=89.46 E-value=0.087 Score=32.49 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=22.6
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|.+|+.+ +.+|++|++|
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m 29 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTM 29 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHH
Confidence 67765 78999999999 8899999877
No 43
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=71.30 E-value=1.8 Score=25.98 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=22.1
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|.+|+.+ +.+|++++.|
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~m 30 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTM 30 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHH
Confidence 67777 77899999998 7899998877
No 44
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=54.35 E-value=1.5 Score=26.96 Aligned_cols=26 Identities=23% Similarity=0.524 Sum_probs=11.8
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|.+|+.+ +.+|++++.|
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~m 32 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHM 32 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHH
Confidence 56665 68899999998 7899999887
No 45
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=41.54 E-value=7.9 Score=21.50 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=20.7
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|..++.+ +..|.+++.|
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~m 29 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAM 29 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHH
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHH
Confidence 56666 78899999986 7788888776
No 46
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=41.43 E-value=10 Score=21.18 Aligned_cols=26 Identities=23% Similarity=0.414 Sum_probs=20.9
Q ss_pred EEEEe-CCeEEeecceeeeccCcccccc
Q psy12932 37 VTLKA-EGEAFQAHRIILSASSPFFQNF 63 (107)
Q Consensus 37 v~~~~-~~~~~~~h~~vl~~~s~~f~~~ 63 (107)
|++.. +|..|..++.+ +..|..++.|
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~m 32 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAM 32 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHH
Confidence 67766 78899999986 7788887766
No 47
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=21.99 E-value=99 Score=18.99 Aligned_cols=24 Identities=25% Similarity=0.133 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhCCCeeeEEEEeCC
Q psy12932 18 QVHLAFELYQLLKMESMVDVTLKAEG 43 (107)
Q Consensus 18 ~~~~~~~l~~l~~~~~~~Dv~~~~~~ 43 (107)
...+.+.|++++.+| .|+++.+||
T Consensus 80 S~~fA~~l~~~~~~G--~~i~FvIGG 103 (163)
T 1o6d_A 80 SEEFADFLKDLEMKG--KDITILIGG 103 (163)
T ss_dssp HHHHHHHHHHHHHHT--CCEEEEECC
T ss_pred HHHHHHHHHHHHhcC--CeEEEEEEC
Confidence 356677788888888 699999987
No 48
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=20.30 E-value=99 Score=18.79 Aligned_cols=24 Identities=33% Similarity=0.220 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhCCCeeeEEEEeCC
Q psy12932 18 QVHLAFELYQLLKMESMVDVTLKAEG 43 (107)
Q Consensus 18 ~~~~~~~l~~l~~~~~~~Dv~~~~~~ 43 (107)
...+.+.+++++.+| .|+++.+||
T Consensus 81 S~~fA~~l~~~~~~g--~~i~FvIGG 104 (155)
T 1ns5_A 81 TPQLAAELERWKLDG--RDVSLLIGG 104 (155)
T ss_dssp HHHHHHHHHHHHHHC--SCEEEEECB
T ss_pred HHHHHHHHHHHHhcC--CeEEEEEEC
Confidence 356667788888888 599999987
Done!