BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12933
(65 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXT6|KDM8_MOUSE Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1
Length = 414
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
T + C L+PGD L+IP K WH+VRSL S SVSFW+
Sbjct: 375 TEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWW 413
>sp|Q497B8|KDM8_RAT Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2
SV=1
Length = 414
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
T + C L+PGD L+IP K WH+VRSL S SVSFW+
Sbjct: 375 TEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWW 413
>sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1
Length = 404
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+EC L PG++L+IP K WH+VRSL S SVSFW+
Sbjct: 370 LECVLQPGEVLFIPVKHWHYVRSLELSFSVSFWW 403
>sp|Q54LV7|JMJCC_DICDI JmjC domain-containing protein C OS=Dictyostelium discoideum
GN=jcdC PE=4 SV=2
Length = 415
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 31 LIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+IE LN G+ML+IP WHHV++L SIS++FWF
Sbjct: 253 IIEIQLNQGEMLFIPKLWWHHVKTLEPSISINFWF 287
>sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1
Length = 416
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 31 LIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ C L+PG++L+IP K WH+VR+L S SVSFW+
Sbjct: 381 FLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWW 415
>sp|B2GUS6|KDM8_XENTR Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2
SV=1
Length = 443
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 9 TSQSNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
TSQ + + Q+ P + EC L+PG +L+IP K WH++R+L S SVSFW+
Sbjct: 387 TSQVDVESPDQNKFPRFSQASYQ-ECILSPGQVLFIPVKWWHYIRALDLSFSVSFWW 442
>sp|Q1JP61|KDM8_BOVIN Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1
Length = 406
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 31 LIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ C L+PG++L+IP K WH+VR+L S SVSFW+
Sbjct: 371 FLSCVLSPGEVLFIPVKHWHYVRALDLSFSVSFWW 405
>sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
EC L PGD+L+IP + W++VRSL S SVSFW+
Sbjct: 373 ECVLCPGDVLFIPLQHWYYVRSLELSFSVSFWW 405
>sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum
GN=jcdD PE=4 SV=1
Length = 448
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 13 NSKEEAQSSAPHNQTPGH----------LIECTLNPGDMLYIPPKVWHHVRSLSTSISV 61
NSK +S + P H IE LN G++LYIPP WH V+SLS S S+
Sbjct: 388 NSKLFFNTSMVDVENPDHSKFPLFKNCDYIELILNAGEILYIPPTYWHFVKSLSQSFSI 446
>sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum
GN=jcdF PE=4 SV=1
Length = 474
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 30 HLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
H EC L PGD+L++P +H+VRSLSTS+S+SFWF
Sbjct: 436 HYTECILGPGDILFMPSGYFHYVRSLSTSLSLSFWF 471
>sp|P59723|HIF1N_DANRE Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an
PE=2 SV=2
Length = 344
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSL---STSISVSFWF 65
E + PGD+LYIP WHH+ SL +I+V+FW+
Sbjct: 253 EAVVGPGDVLYIPMYWWHHIESLLNGGETITVNFWY 288
>sp|Q9NWT6|HIF1N_HUMAN Hypoxia-inducible factor 1-alpha inhibitor OS=Homo sapiens
GN=HIF1AN PE=1 SV=2
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSL---STSISVSFWF 65
E + PGD+LYIP WHH+ SL +I+V+FW+
Sbjct: 262 ETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297
>sp|Q5UQY3|YL887_MIMIV Putative JmjC domain-containing protein L887 OS=Acanthamoeba
polyphaga mimivirus GN=MIMI_L887 PE=4 SV=1
Length = 604
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFW 64
E L GDMLYIP WH + S+ +ISV+FW
Sbjct: 78 EFELRSGDMLYIPKGWWHWIESIGRTISVNFW 109
>sp|Q8BLR9|HIF1N_MOUSE Hypoxia-inducible factor 1-alpha inhibitor OS=Mus musculus
GN=Hif1an PE=1 SV=2
Length = 349
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSL---STSISVSFWF 65
E + PGD+LYIP WHH+ SL +I+V+FW+
Sbjct: 262 ETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297
>sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=2 SV=1
Length = 316
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ CT+ G+MLY+P +HHV+ I+V+FW+
Sbjct: 259 LRCTVRAGEMLYLPALWFHHVQQSQGCIAVNFWY 292
>sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=2 SV=1
Length = 316
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ CT+ G+MLY+P +HHV+ I+V+FW+
Sbjct: 259 LHCTVRAGEMLYLPALWFHHVQQSHGCIAVNFWY 292
>sp|Q6C3P4|LCMT2_YARLI Leucine carboxyl methyltransferase 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=PPM2 PE=3 SV=1
Length = 989
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS-FW 64
E +NPGD+L+IPP H V + SISV+ FW
Sbjct: 898 EVVMNPGDILFIPPMWLHAVEPQTESISVNCFW 930
>sp|Q96S16|JMJD8_HUMAN JmjC domain-containing protein 8 OS=Homo sapiens GN=JMJD8 PE=2 SV=1
Length = 334
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
+ECT+ G++LY P + WH +L TS+ +S
Sbjct: 300 LECTIRAGEVLYFPDRWWHATLNLDTSVFIS 330
>sp|Q3TA59|JMJD8_MOUSE JmjC domain-containing protein 8 OS=Mus musculus GN=Jmjd8 PE=2 SV=2
Length = 316
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
+ECT+ G++LY P + WH +L TS+ +S
Sbjct: 282 LECTIQAGEVLYFPDRWWHATLNLDTSVFIS 312
>sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2
SV=3
Length = 943
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
IECTL PG+ +Y+P WH + +L +++V+
Sbjct: 329 IECTLLPGETIYVPSGWWHCILNLEPTVAVT 359
>sp|Q6AY40|JMJD8_RAT JmjC domain-containing protein 8 OS=Rattus norvegicus GN=Jmjd8 PE=2
SV=2
Length = 291
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
+ECT+ G+ LY P + WH +L TS+ +S
Sbjct: 257 LECTIQAGEALYFPDRWWHATLNLDTSVFIS 287
>sp|Q9P3K9|LCMT2_NEUCR Leucine carboxyl methyltransferase 2 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=ppm-2 PE=3 SV=1
Length = 1213
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 11/56 (19%)
Query: 12 SNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLS--TSISVSFWF 65
S+S+ AQ + PH E + PGD+L++PP +W H + + +SI+V+ +F
Sbjct: 1103 SDSRYLAQVTHPH--------EAVMTPGDVLFLPP-LWLHTATPTSDSSIAVNVFF 1149
>sp|Q08BV2|TYW5_DANRE tRNA wybutosine-synthesizing protein 5 OS=Danio rerio GN=tyw5 PE=2
SV=1
Length = 326
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS-FW 64
EC L PGD+L+IP +H+ +L + V+ FW
Sbjct: 219 ECILEPGDLLFIPALWFHNTLALQFGVGVNVFW 251
>sp|Q4IER0|LCMT2_GIBZE Leucine carboxyl methyltransferase 2 OS=Gibberella zeae (strain
PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM2
PE=3 SV=1
Length = 989
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
E LNPGD+L+I P +W H S T +SV+
Sbjct: 898 EAFLNPGDLLFI-PAMWFHTASPVTDLSVA 926
>sp|Q5BKC6|HBAP1_RAT HSPB1-associated protein 1 OS=Rattus norvegicus GN=Hspbap1 PE=1
SV=1
Length = 479
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 30 HLIECTLNPGDMLYIPPKVWHHVRSLS-TSISVSFWF 65
H++ TL+PG +L++P WH+V SL ++S++ W
Sbjct: 239 HMV--TLSPGQVLFVPRHWWHYVESLDPVTVSINSWI 273
>sp|Q4WVD1|LCMT2_ASPFU Leucine carboxyl methyltransferase 2 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=ppm2 PE=3 SV=2
Length = 1047
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 13 NSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
N K+ + S PH E LN GD+L+IPP +W H S + +SV+
Sbjct: 937 NIKDGSIVSIPHTSPQ----EAVLNSGDILFIPP-MWLHTASPTGGVSVA 981
>sp|Q6AXL5|HBAP1_DANRE HSPB1-associated protein 1 homolog OS=Danio rerio GN=hspbap1 PE=2
SV=2
Length = 449
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 29 GHLIECTLNPGDMLYIPPKVWHHVRSLS-TSISVSFWF 65
L TL PG +L++P WH+V S+ ++SV+ W
Sbjct: 214 ARLYTVTLQPGQVLFVPRHWWHYVESVDPVTVSVNSWI 251
>sp|Q8BK58|HBAP1_MOUSE HSPB1-associated protein 1 OS=Mus musculus GN=Hspbap1 PE=1 SV=2
Length = 483
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLS-TSISVSFW 64
TL+PG +L++P WH+V SL ++S++ W
Sbjct: 242 TLSPGQVLFVPRHWWHYVESLDPVTVSINSW 272
>sp|Q9H9V9|JMJD4_HUMAN JmjC domain-containing protein 4 OS=Homo sapiens GN=JMJD4 PE=2 SV=2
Length = 463
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 23 PHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
P NQ G +E T G+M+++P H V +L +IS++
Sbjct: 288 PRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
>sp|Q58CU3|HBAP1_BOVIN HSPB1-associated protein 1 OS=Bos taurus GN=HSPBAP1 PE=2 SV=1
Length = 484
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 34 CTLNPGDMLYIPPKVWHHVRSLS-TSISVSFW 64
TL+PG +L++P WH+V S+ ++S++ W
Sbjct: 241 VTLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272
>sp|Q03677|MTND_YEAST 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ADI1 PE=1 SV=1
Length = 179
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHVRSLSTS 58
TP + I C + GD+L +PP ++H +L+TS
Sbjct: 109 TPENWIRCLVESGDLLILPPGIYHRF-TLTTS 139
>sp|Q96EW2|HBAP1_HUMAN HSPB1-associated protein 1 OS=Homo sapiens GN=HSPBAP1 PE=1 SV=1
Length = 488
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLS-TSISVSFW 64
TL+PG +L++P WH+V S+ ++S++ W
Sbjct: 242 TLSPGQVLFVPRHWWHYVESIDPVTVSINSW 272
>sp|P46327|YXBC_BACSU Uncharacterized protein YxbC OS=Bacillus subtilis (strain 168)
GN=yxbC PE=1 SV=1
Length = 330
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 34 CTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
L PG MLY+P +WH +S +++++ F
Sbjct: 208 VNLTPGTMLYLPRGLWHSTKSDQATLALNITF 239
>sp|A2RSX7|TYW5_MOUSE tRNA wybutosine-synthesizing protein 5 OS=Mus musculus GN=Tyw5 PE=2
SV=2
Length = 315
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS-FW 64
EC+L GD+L+IP +H+V S + V+ FW
Sbjct: 218 ECSLEAGDVLFIPALWFHNVVSEEFGVGVNIFW 250
>sp|P27431|YCFD_ECOLI 50S ribosomal protein L16 arginine hydroxylase OS=Escherichia coli
(strain K12) GN=ycfD PE=1 SV=2
Length = 373
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 31 LIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+I+ L PGD+LYIPP H +L +++ S F
Sbjct: 168 IIDEELEPGDILYIPPGFPHEGYALENAMNYSVGF 202
>sp|A2RUC4|TYW5_HUMAN tRNA wybutosine-synthesizing protein 5 OS=Homo sapiens GN=TYW5 PE=1
SV=1
Length = 315
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS-FW 64
EC+L GD+L+IP +H+V S + V+ FW
Sbjct: 218 ECSLEAGDVLFIPALWFHNVISEEFGVGVNIFW 250
>sp|P44683|Y396_HAEIN Probable ribosomal oxygenase HI_0396 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0396
PE=1 SV=1
Length = 404
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 31 LIECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
+I+ +NPGD+LYIP ++ H+ + ++ SF
Sbjct: 180 VIDEVMNPGDILYIPARMAHYGVAEDDCLTFSF 212
>sp|Q67XX3|FB252_ARATH F-box protein At5g06550 OS=Arabidopsis thaliana GN=At5g06550 PE=2
SV=1
Length = 502
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
IEC G+++++P WH V +L SI+++
Sbjct: 389 IECICKAGEVMFVPNGWWHLVINLEESIAIT 419
>sp|Q6PFM0|JMJD6_DANRE Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6
OS=Danio rerio GN=jmjd6 PE=2 SV=2
Length = 403
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 19 QSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
QS+ P P +E PG+ +++P WH V +L T+I+V+
Sbjct: 245 QSTWPDEFRP---LEILQRPGETVFVPGGWWHVVLNLDTTIAVT 285
>sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A
OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1
Length = 403
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
+E PG+ +++P WH V +L T+I+V+
Sbjct: 255 LEILQKPGETVFVPGGWWHVVLNLDTAIAVT 285
>sp|Q9GYI4|JMJD6_CAEEL Bifunctional arginine demethylase and lysyl-hydroxylase psr-1
OS=Caenorhabditis elegans GN=psr-1 PE=1 SV=2
Length = 400
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 32 IECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
IEC PG+ +++P WH V + +I+V+
Sbjct: 260 IECRQGPGETMFVPSGWWHVVINEEYTIAVT 290
>sp|Q6NTP2|IREB2_XENLA Iron-responsive element-binding protein 2 OS=Xenopus laevis
GN=ireb2 PE=2 SV=1
Length = 955
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 8 ETSQSNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFW 64
ET + KE+ S P + TPGH +E N G K++H + + V+ +
Sbjct: 892 ETLGLSGKEQYSLSLPVDLTPGHKVEIKTNTG-------KIFHVIAAFDNEAEVTLY 941
>sp|Q2U6D4|LCMT2_ASPOR Leucine carboxyl methyltransferase 2 OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=ppm2 PE=3 SV=2
Length = 1032
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVS 62
E L GD+L+IPP +W H S + +SV+
Sbjct: 938 EAVLKRGDILFIPP-LWLHTASPTGDVSVA 966
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.127 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,133,414
Number of Sequences: 539616
Number of extensions: 717509
Number of successful extensions: 1940
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1898
Number of HSP's gapped (non-prelim): 48
length of query: 65
length of database: 191,569,459
effective HSP length: 37
effective length of query: 28
effective length of database: 171,603,667
effective search space: 4804902676
effective search space used: 4804902676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)