RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12933
(65 letters)
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 53.4 bits (127), Expect = 6e-11
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 30 HLIECTLNPGDMLYIPPKVWHHVRSL---STSISVSFWF 65
E + PGD+LYIP WHH+ SL +I+V+FW+
Sbjct: 245 VGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 283
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC
{Bacillus subtilis [TaxId: 1423]}
Length = 319
Score = 53.0 bits (126), Expect = 7e-11
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 29 GHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
L PG MLY+P +WH +S +++++ F
Sbjct: 196 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITF 232
>d3bb6a1 b.82.2.13 (A:1-109) Uncharacterized protein YeaR
{Escherichia coli [TaxId: 562]}
Length = 109
Score = 35.1 bits (81), Expect = 9e-05
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 24 HNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLS--TSISVSFW 64
H+ P +I + G PP+ WH++ +++ T ++ F+
Sbjct: 59 HSAEPDQVI--LIEAGQFAVFPPEKWHNIEAMTDDTYFNIDFF 99
>d1sefa_ b.82.1.11 (A:) Hypothetical protein EF2996 {Enterococcus
faecalis [TaxId: 1351]}
Length = 250
Score = 31.6 bits (71), Expect = 0.003
Identities = 3/31 (9%), Positives = 12/31 (38%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ GD +++ V ++ + + +
Sbjct: 210 PVEKGDYIFMSAYVPQAAYAVGREEPLMYVY 240
Score = 30.1 bits (67), Expect = 0.011
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
L G Y P++ ++ + + + F +
Sbjct: 91 ELEAGGYAYFTPEMKMYLANAQEADTEVFLY 121
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus
subtilis [TaxId: 1423]}
Length = 372
Score = 31.5 bits (71), Expect = 0.003
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHVRSLS 56
G + GD+ Y P + H +++L
Sbjct: 110 EKGRSFIDDVGEGDLWYFPSGLPHSIQALE 139
Score = 30.8 bits (69), Expect = 0.005
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ GH GD+ Y+P + H+V ++ V
Sbjct: 289 SDGHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEI 327
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli
[TaxId: 562]}
Length = 253
Score = 31.3 bits (70), Expect = 0.004
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
L+ G LY PP + S F +
Sbjct: 92 TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLY 124
Score = 30.5 bits (68), Expect = 0.007
Identities = 3/30 (10%), Positives = 10/30 (33%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTSISVSFW 64
+ GD +++ + + S+
Sbjct: 213 PVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 242
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia
coli [TaxId: 562]}
Length = 308
Score = 30.9 bits (69), Expect = 0.005
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
+ + D+ +P ++ S+ SF
Sbjct: 261 TFSFSAKDIFVVPTWHGVSFQTTQDSVLFSF 291
Score = 29.4 bits (65), Expect = 0.019
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLST 57
+N GD + P WH +
Sbjct: 94 RTPMNEGDFILTPQWRWHDHGNPGD 118
>d2phda1 b.82.1.23 (A:17-367) Gentisate 1,2-dioxygenase
{Pseudaminobacter salicylatoxidans [TaxId: 93369]}
Length = 351
Score = 30.9 bits (69), Expect = 0.005
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
L GDM +P V +++ + F
Sbjct: 302 TTKLEKGDMFVVPSWVPWSLQAETQFDLFRF 332
Score = 29.3 bits (65), Expect = 0.022
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
++ GD+L P +H + +
Sbjct: 127 PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDG 159
>d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus
subtilis [TaxId: 1423]}
Length = 330
Score = 31.0 bits (69), Expect = 0.006
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
E LNPGD L++P H R S +
Sbjct: 254 EIQLNPGDFLHVPANTVHSYRLDSHYTKMVGVL 286
Score = 30.6 bits (68), Expect = 0.006
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
L GD IP H R S + +
Sbjct: 82 RYLLISGDYANIPAGTPHSYRMQSHRTRLVSYT 114
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 201
Score = 30.7 bits (69), Expect = 0.006
Identities = 5/35 (14%), Positives = 12/35 (34%)
Query: 24 HNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTS 58
+ L + G+ IP + H ++ +
Sbjct: 111 SLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKT 145
>d3dl3a1 b.82.2.13 (A:5-100) Tellurite resistance protein B, TehB
{Vibrio fischeri [TaxId: 668]}
Length = 96
Score = 30.0 bits (68), Expect = 0.007
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 30 HLIECTLNPGDMLYIPPKVWHHVR-SLSTSISVSFW 64
I+ +N G PP+ WH + S +++FW
Sbjct: 58 PEIKVVINAGQFATSPPQYWHRIELSDDAQFNINFW 93
>d1sq4a_ b.82.1.11 (A:) Glyoxylate-induced protein PA1140
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 273
Score = 30.4 bits (68), Expect = 0.007
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
+ PG +IPP + VR+ + + W
Sbjct: 109 AMQPGGYAFIPPGADYKVRNTTGQHTRFHWI 139
Score = 29.7 bits (66), Expect = 0.014
Identities = 3/25 (12%), Positives = 7/25 (28%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLST 57
+ GD +++ S
Sbjct: 229 WVEVEAGDFMWLRAFCPQACYSGGP 253
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus
japonicus [TaxId: 34381]}
Length = 348
Score = 30.6 bits (68), Expect = 0.007
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLST 57
L+ GD +P V H +
Sbjct: 95 VLSSGDYGSVPRNVTHTFQIQDP 117
Score = 27.9 bits (61), Expect = 0.057
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLS 56
L GD+ +IP V S +
Sbjct: 292 ELGSGDVAFIPGGVEFKYYSEA 313
>d1zvfa1 b.82.1.20 (A:1-175) 3-hydroxyanthranilate-3,4-dioxygenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 175
Score = 30.1 bits (68), Expect = 0.010
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 25 NQTPGHLIECTLNPGDMLYIPPKVWH 50
I+ +N GD +P V H
Sbjct: 72 TDAEPKFIDIIINEGDSYLLPGNVPH 97
>d1uija1 b.82.1.2 (A:6-175) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin beta subunit [TaxId:
3847]}
Length = 170
Score = 29.5 bits (66), Expect = 0.017
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHV 52
L+PGD IP +++
Sbjct: 81 NNDDRDSYNLHPGDAQRIPAGTTYYL 106
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 245
Score = 29.3 bits (65), Expect = 0.020
Identities = 3/24 (12%), Positives = 10/24 (41%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTS 58
+ GD++++ +L +
Sbjct: 207 PVTAGDIIWMGAHCPQWYGALGRN 230
Score = 27.7 bits (61), Expect = 0.075
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLST 57
TL D +Y+P H + + +
Sbjct: 89 TLREYDYVYLPAGEKHMLTAKTD 111
>d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase
{Silicibacter pomeroyi [TaxId: 89184]}
Length = 355
Score = 29.3 bits (65), Expect = 0.022
Identities = 4/26 (15%), Positives = 8/26 (30%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLSTS 58
+ D+ +P WH +
Sbjct: 295 RFDWSEHDIFCVPAWTWHEHCNTQER 320
Score = 27.3 bits (60), Expect = 0.089
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLST 57
+ L D + P WH L +
Sbjct: 125 KVELGANDFVLTPNGTWHEHGILES 149
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella
pneumoniae [TaxId: 573]}
Length = 179
Score = 28.7 bits (64), Expect = 0.028
Identities = 3/19 (15%), Positives = 7/19 (36%)
Query: 32 IECTLNPGDMLYIPPKVWH 50
+ D++ +P H
Sbjct: 122 FQVLCEKNDLISVPAHTPH 140
>d2bnma2 b.82.1.10 (A:77-198) Hydroxypropylphosphonic acid epoxidase
Fom4, C-terminal domain {Streptomyces wedmorensis
[TaxId: 43759]}
Length = 122
Score = 28.4 bits (63), Expect = 0.029
Identities = 4/22 (18%), Positives = 8/22 (36%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLS 56
L G +++ V H +
Sbjct: 89 LLPTGASMFVEEHVPHAFTAAK 110
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays)
[TaxId: 4577]}
Length = 160
Score = 27.9 bits (61), Expect = 0.056
Identities = 7/31 (22%), Positives = 8/31 (25%)
Query: 23 PHNQTPGHLIECTLNPGDMLYIPPKVWHHVR 53
+ PG E IP H V
Sbjct: 79 SSLKYPGQPQEIPFFQNTTFSIPVNDPHQVW 109
>d1uika1 b.82.1.2 (A:148-350) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin alpha prime subunit
[TaxId: 3847]}
Length = 203
Score = 27.6 bits (61), Expect = 0.068
Identities = 6/26 (23%), Positives = 9/26 (34%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHV 52
L GD L +P ++V
Sbjct: 77 NNDDRDSYNLQSGDALRVPAGTTYYV 102
>d2pyta1 b.82.1.24 (A:100-227) Ethanolamine utilization protein EutQ
{Salmonella typhimurium [TaxId: 90371]}
Length = 128
Score = 27.2 bits (60), Expect = 0.078
Identities = 4/25 (16%), Positives = 10/25 (40%)
Query: 33 ECTLNPGDMLYIPPKVWHHVRSLST 57
GD+++IP + ++
Sbjct: 91 TMIAKAGDVMFIPKGSSIEFGTPTS 115
>d1yfua1 b.82.1.20 (A:1-174) 3-hydroxyanthranilate-3,4-dioxygenase
{Ralstonia metallidurans [TaxId: 119219]}
Length = 174
Score = 27.0 bits (60), Expect = 0.10
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 26 QTPGHLIECTLNPGDMLYIPPKVWHH 51
G L GD+ +PP V H
Sbjct: 71 WVDGRRERADLKEGDIFLLPPHVRHS 96
>d1dgwa_ b.82.1.2 (A:) Seed storage 7S protein {Jack bean (Canavalia
ensiformis), canavalin/vinculin [TaxId: 3823]}
Length = 178
Score = 26.8 bits (59), Expect = 0.13
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 27 TPGHLIECTLNPGDMLYIPPKVWHHV 52
P L+ GD + I ++
Sbjct: 78 NPDGRDTYKLDQGDAIKIQAGTPFYL 103
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 179
Score = 26.7 bits (59), Expect = 0.13
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 28 PGHLIECTLNPGDMLYIPPKVWH 50
I ++ GDM+ +P ++H
Sbjct: 111 EDKWIRISMEKGDMITLPAGIYH 133
>d2f4pa1 b.82.1.9 (A:2-135) Hypothetical protein TM1010
{Thermotoga maritima [TaxId: 2336]}
Length = 134
Score = 26.1 bits (57), Expect = 0.20
Identities = 12/50 (24%), Positives = 18/50 (36%), Gaps = 15/50 (30%)
Query: 16 EEAQSSAPHNQTPGHLIECT---------------LNPGDMLYIPPKVWH 50
E + H+ G ++ T L GD++ IPP V H
Sbjct: 43 EPGARTHWHSHPGGQILIVTRGKGFYQERGKPARILKKGDVVEIPPNVVH 92
>d1uika2 b.82.1.2 (A:351-535) Seed storage 7S protein {Soybean
(Glycine max), beta-conglycinin alpha prime subunit
[TaxId: 3847]}
Length = 185
Score = 25.7 bits (56), Expect = 0.41
Identities = 7/49 (14%), Positives = 15/49 (30%)
Query: 15 KEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
+++ + L+ D+ IP V + S +F
Sbjct: 83 EQQQRQQQEEQPLEVRKYRAELSEQDIFVIPAGYPVVVNATSDLNFFAF 131
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean
(Glycine max), proglycinin [TaxId: 3847]}
Length = 174
Score = 25.3 bits (55), Expect = 0.54
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 25 NQTPGHLIECTLNPGDMLYIPPKVWHHVRSLS 56
N + + L G +L +P RS S
Sbjct: 80 NCNGERVFDGELQEGRVLIVPQNFVVAARSQS 111
>g1dgw.1 b.82.1.2 (X:,Y:) Seed storage 7S protein {Jack bean
(Canavalia ensiformis), canavalin/vinculin [TaxId:
3823]}
Length = 168
Score = 25.0 bits (54), Expect = 0.70
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 25 NQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
TL+ GD++ IP +++ S V
Sbjct: 74 GLEQLRRYAATLSEGDIIVIPSSFPVALKAASDLNMVGI 112
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 190
Score = 24.7 bits (53), Expect = 0.96
Identities = 7/31 (22%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 35 TLNPGDMLYIPPKVWHHVRSLSTSISVSFWF 65
++ PG ++Y+PP H ++ + F
Sbjct: 122 SMEPGTVVYVPPYWAHRTVNIGDEPFI-FLA 151
>d2arca_ b.82.4.1 (A:) Regulatory protein AraC {Escherichia coli
[TaxId: 562]}
Length = 161
Score = 24.6 bits (53), Expect = 0.98
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 35 TLNPGDMLYIPPKVWHH 51
PGD+L PP HH
Sbjct: 59 VCRPGDILLFPPGEIHH 75
>d1od5a2 b.82.1.2 (A:321-493) Seed storage 7S protein {Soybean
(Glycine max), glycinin A3B4 [TaxId: 3847]}
Length = 173
Score = 24.5 bits (53), Expect = 1.0
Identities = 5/33 (15%), Positives = 10/33 (30%)
Query: 25 NQTPGHLIECTLNPGDMLYIPPKVWHHVRSLST 57
N + + L G +L +P +
Sbjct: 85 NCQGNAVFDGELRRGQLLVVPQNFVVAEQGGEQ 117
>d1fxza1 b.82.1.2 (A:10-248) Seed storage 7S protein {Soybean
(Glycine max), proglycinin [TaxId: 3847]}
Length = 239
Score = 24.1 bits (52), Expect = 1.6
Identities = 7/46 (15%), Positives = 15/46 (32%)
Query: 7 CETSQSNSKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWHHV 52
C ++ ++ Q H GD++ +P V +
Sbjct: 79 CPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWM 124
>d1qwra_ b.82.1.3 (A:) Mannose-6-phosphate isomerase ManA {Bacillus
subtilis [TaxId: 1423]}
Length = 315
Score = 23.9 bits (51), Expect = 1.8
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 14 SKEEAQSSAPHNQTPGHLIECTLNPGDMLYIPPKVWH 50
SK E + G L + PGD Y+P H
Sbjct: 136 SKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLH 172
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate
aldolase/transaldolase {Thermus thermophilus [TaxId:
274]}
Length = 211
Score = 23.6 bits (50), Expect = 1.9
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 26 QTPGHLIECTLNPGDMLYIPPKVW 49
+ P H+ E L D+ +P V+
Sbjct: 175 RHPRHVTEAALLGADIATMPHAVF 198
>d1jw2a_ a.23.5.1 (A:) Hemolysin expression modulating protein HHA
{Escherichia coli [TaxId: 562]}
Length = 72
Score = 22.8 bits (49), Expect = 2.9
Identities = 5/10 (50%), Positives = 6/10 (60%)
Query: 44 IPPKVWHHVR 53
IP VW +R
Sbjct: 63 IPSSVWKFIR 72
>d2phla2 b.82.1.2 (A:220-381) Seed storage 7S protein {French bean
(Phaseolus vulgaris), phaseolin [TaxId: 3885]}
Length = 162
Score = 23.0 bits (49), Expect = 3.1
Identities = 6/34 (17%), Positives = 11/34 (32%)
Query: 30 HLIECTLNPGDMLYIPPKVWHHVRSLSTSISVSF 63
L+ D+ IP +++ S F
Sbjct: 69 ESYRAELSKDDVFVIPAAYPVAIKATSNVNFTGF 102
>d2bdra1 b.82.1.14 (A:1-166) Ureidoglycolate hydrolase AllA
{Pseudomonas putida [TaxId: 303]}
Length = 166
Score = 23.0 bits (49), Expect = 3.8
Identities = 6/33 (18%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 21 SAPHNQTPGHLIECTLNPGDM-LYIPPKVWHHV 52
+ + L+ + G + VWHH
Sbjct: 96 APVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHP 128
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate
aldolase/transaldolase {Escherichia coli [TaxId: 562]}
Length = 220
Score = 22.8 bits (48), Expect = 4.2
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 26 QTPGHLIECTLNPGDMLYIPPKVW 49
+TP ++C L + + +P V
Sbjct: 168 KTPRQALDCLLAGCESITLPLDVA 191
>d1o4ta_ b.82.1.9 (A:) Hypothetical protein TM1287 {Thermotoga
maritima [TaxId: 2336]}
Length = 115
Score = 22.0 bits (46), Expect = 7.1
Identities = 3/24 (12%), Positives = 8/24 (33%)
Query: 34 CTLNPGDMLYIPPKVWHHVRSLST 57
+ GD+ + H + +
Sbjct: 80 VPIKAGDVCFTDSGESHSIENTGN 103
>d2sqca2 a.102.4.2 (A:37-307) Squalene-hopene cyclase
{Alicyclobacillus acidocaldarius [TaxId: 405212]}
Length = 271
Score = 21.9 bits (46), Expect = 8.0
Identities = 6/40 (15%), Positives = 12/40 (30%)
Query: 22 APHNQTPGHLIECTLNPGDMLYIPPKVWHHVRSLSTSISV 61
P + P E M + R+ ++S+
Sbjct: 104 YPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSI 143
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.127 0.403
Gapped
Lambda K H
0.267 0.0551 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 232,131
Number of extensions: 7308
Number of successful extensions: 74
Number of sequences better than 10.0: 1
Number of HSP's gapped: 73
Number of HSP's successfully gapped: 53
Length of query: 65
Length of database: 2,407,596
Length adjustment: 34
Effective length of query: 31
Effective length of database: 1,940,776
Effective search space: 60164056
Effective search space used: 60164056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.3 bits)