BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12936
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7JWR9|ZC3HF_DROME Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
melanogaster GN=CG8635 PE=1 SV=1
Length = 404
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 134/181 (74%), Gaps = 3/181 (1%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGPTCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIERE 60
ICK+F+EAVE SKYGWFW CPNG CIY+HALP G+VLK+DKKKEEK +ISL DLIE+E
Sbjct: 170 ICKFFLEAVEKSKYGWFWECPNGGKCIYRHALPAGYVLKRDKKKEEKPTEISLVDLIEKE 229
Query: 61 RAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFSF 120
RAAL + T+VTL+SFLAWKKRK+ EK + EE+K+SDF G+Q G+SGR+MFSF
Sbjct: 230 RAALGPNQ--TRVTLESFLAWKKRKIAEKKAKLAAEEERKKSDFSKGKQFGISGREMFSF 287
Query: 121 NPDLAKDD-MDEGDEAFDSYTRDEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRVF 179
NPDL D M+EGD AFD Y R++++D ++ELDL L A E+D + + +R+
Sbjct: 288 NPDLVDDGPMEEGDAAFDVYNREDDDDNAVEFKELDLAALSLAAKEVDGSGTIASTNRLL 347
Query: 180 D 180
D
Sbjct: 348 D 348
>sp|Q28Y69|ZC3HF_DROPS Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1
Length = 406
Score = 203 bits (517), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 136/182 (74%), Gaps = 4/182 (2%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGPTCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIERE 60
ICK+F+EAVE SKYGWFW CPNG CIY+HALPPG+VLK+DKKKE+K +ISL DLIE+E
Sbjct: 171 ICKFFLEAVEKSKYGWFWECPNGEKCIYRHALPPGYVLKRDKKKEDKPTEISLVDLIEKE 230
Query: 61 RAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFSF 120
RAAL ++ T+VTL++FLAWKKRKL+EK M EE+K+SDF G+Q G+SGR+MFSF
Sbjct: 231 RAALGSNQ--TRVTLETFLAWKKRKLQEKKAKMVAEEERKKSDFSKGKQFGISGREMFSF 288
Query: 121 NPDLAKDD-MDEGDEAFDSYTR-DEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRV 178
NPDL D ++EGD AFD Y R D+++D ++ELDL L A E+D + + R+
Sbjct: 289 NPDLVDDGPIEEGDAAFDVYKREDDDDDNAFEFKELDLAALSLAAKEVDGSGTIASSTRL 348
Query: 179 FD 180
D
Sbjct: 349 LD 350
>sp|Q8WU90|ZC3HF_HUMAN Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens
GN=ZC3H15 PE=1 SV=1
Length = 426
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 133/183 (72%), Gaps = 6/183 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CK+F+EA+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK+D+ISLEDLIER
Sbjct: 179 VCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIER 238
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ER+AL + TK+TL+SFLAWKKRK +EK + + + E++++DFKAG+ + +SGR++F
Sbjct: 239 ERSALGPN--VTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFE 296
Query: 120 FNPDLAKDDMDEGDEA-FDSYTRDEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRV 178
F P+L DD +E D+ + T +E D + ++DL + + ++DET I+ A
Sbjct: 297 FRPELVNDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYI--PRDVDETGITVASLER 354
Query: 179 FDT 181
F T
Sbjct: 355 FST 357
>sp|Q6U6G5|ZC3HF_RAT Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus
GN=Zc3h15 PE=2 SV=1
Length = 426
Score = 164 bits (416), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+C++F+EA+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK+D+ISLEDLIER
Sbjct: 179 VCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKKKEEKEDEISLEDLIER 238
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ER+AL + TK+TL+SFLAWKKRK +EK + + + E++++DFKAG+ + +SGR++F
Sbjct: 239 ERSALGPN--VTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFE 296
Query: 120 FNPDLAKDDMDEGDEA-FDSYTRDEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRV 178
F P+L DD +E D+ + T +E D ++DL + + +++ET I+ A
Sbjct: 297 FRPELVNDDDEEADDTRYIQGTGGDEVDDSVGVNDIDLSLYV--PRDVEETGITVASLER 354
Query: 179 FDTRA 183
F T A
Sbjct: 355 FSTYA 359
>sp|Q3TIV5|ZC3HF_MOUSE Zinc finger CCCH domain-containing protein 15 OS=Mus musculus
GN=Zc3h15 PE=1 SV=2
Length = 426
Score = 164 bits (415), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+C++F+EA+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK+D+ISLEDLIER
Sbjct: 179 VCRHFLEAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKKKEEKEDEISLEDLIER 238
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ER+AL + TK+TL+SFLAWKKRK +EK + + + E++++DFKAG+ + +SGR++F
Sbjct: 239 ERSALGPN--VTKITLESFLAWKKRKRQEKIDKLEQDMERRKADFKAGKALVISGREVFE 296
Query: 120 FNPDLAKDDMDEGDEA-FDSYTRDEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRV 178
F P+L DD +E D+ + T +E D ++D+ + + +++ET I+ A
Sbjct: 297 FRPELVNDDDEEADDTRYIQGTGGDEVDDSMGVNDIDISLYV--PRDVEETGITVASVER 354
Query: 179 FDTRA 183
F T A
Sbjct: 355 FSTYA 359
>sp|Q1RMM1|ZC3HF_BOVIN Zinc finger CCCH domain-containing protein 15 OS=Bos taurus
GN=ZC3H15 PE=2 SV=1
Length = 426
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/183 (51%), Positives = 133/183 (72%), Gaps = 6/183 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CK+F+EA+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK+D+ISLEDLIER
Sbjct: 179 VCKHFLEAIENNKYGWFWVCPGGGDICMYRHALPPGFVLKKDKKKEEKEDEISLEDLIER 238
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ER+AL + TK+TL+SFLAWKKRK +EK + + + E++++DFKAG+ + +SGR++F
Sbjct: 239 ERSALGPN--VTKITLESFLAWKKRKRQEKIDKLEQDIERRKADFKAGKALVISGREVFE 296
Query: 120 FNPDLAKDDMDEGDEA-FDSYTRDEEEDPESNYRELDLDMLLNEAAELDETNISQAKDRV 178
F P+L DD +E D+ + T +E D + ++DL + + ++DET I+ A
Sbjct: 297 FRPELVDDDDEEADDTRYTQGTGGDEVDDSVSVNDIDLSLYI--PRDVDETGITVASLER 354
Query: 179 FDT 181
F T
Sbjct: 355 FST 357
>sp|Q5H7N8|ZC3HF_CHICK Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus
GN=ZC3H15 PE=1 SV=1
Length = 429
Score = 156 bits (394), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 136/193 (70%), Gaps = 13/193 (6%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CKYF++A+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK+D+ISLEDLIE+
Sbjct: 180 VCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPPGFVLKKDKKKEEKQDEISLEDLIEK 239
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ERAAL + TK+TL+ F+AWK+RK +EK + + E++++DFKAG+ + +SGR++F
Sbjct: 240 ERAALGPN--VTKITLECFIAWKRRKRQEKIDKAEQDMERRKADFKAGKALVISGREVFE 297
Query: 120 FNPDLAKDDMDEGDEAFDSYTR-----DEEEDPESNYRELDLDMLLNEAAELDETNISQA 174
F P+L D +E D+ YT+ DE EDP ++DL + + +A +DET I+ A
Sbjct: 298 FRPELVDADDEEADDT--RYTQGTGEDDEVEDPVC-VNDVDLSLYVPKA--VDETGITVA 352
Query: 175 KDRVFDTRAGLSR 187
F T A + +
Sbjct: 353 SPERFSTYASIEK 365
>sp|A4IGY3|ZC3HF_XENTR Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 126/176 (71%), Gaps = 6/176 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CK+F+EA+EN+KYGWFW CP G C+Y+HALPPGFVLKKDKKKEEK ++ISLEDLIER
Sbjct: 180 VCKFFLEAIENNKYGWFWVCPGGGDMCMYRHALPPGFVLKKDKKKEEKDEEISLEDLIER 239
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ERA L + T++TL+SFL WKKRK +++ + + EK+++DFKAG+ +G+SGR++F
Sbjct: 240 ERAGLGLN--VTRITLESFLEWKKRKRQDRIVKLEEEMEKRKADFKAGKSLGISGREVFE 297
Query: 120 FNPDLAKDDMDEGDEAFDSYTRDEEE-DPESNYRELDLDMLLNEAAELDETNISQA 174
F P+L + D+ + Y D+E+ D E+ D+D+ ++DET I+ A
Sbjct: 298 FRPELI--NDDDEEADDTDYIFDKEDSDSETADDIKDIDLSRFVLKDVDETGITVA 351
>sp|Q6DD06|ZC3HF_XENLA Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis
GN=zc3h15 PE=2 SV=1
Length = 426
Score = 150 bits (378), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 124/176 (70%), Gaps = 6/176 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CK+F+EA+EN+KYGWFW CP G TC+Y+HALPPGFVLKK+K KE+K + ISLEDLIE+
Sbjct: 180 VCKFFLEAIENNKYGWFWVCPGGGDTCMYRHALPPGFVLKKEKVKEDKDEDISLEDLIEK 239
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ERAAL + T++TL+SFL WKKRK ++ + + EK++ DFK+G+ +G+SGR++F
Sbjct: 240 ERAALGPN--VTRITLESFLQWKKRKRADRILKLEEEMEKRKEDFKSGKSLGVSGREVFE 297
Query: 120 FNPDLAKDDMDEGDEAFDSYTRDEEEDPESNYREL-DLDMLLNEAAELDETNISQA 174
F P+L + D+ + SYT + E+ ++ D+D+ ++DET I+ A
Sbjct: 298 FRPELI--NDDDEEADDASYTFELEDSEAEEIDDVQDIDLSRYVLKDVDETGITVA 351
>sp|Q803J8|ZC3HF_DANRE Zinc finger CCCH domain-containing protein 15 OS=Danio rerio
GN=zc3h15 PE=2 SV=1
Length = 433
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 100/127 (78%), Gaps = 4/127 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQ-ISLEDLIE 58
+CKYF++A+EN+KYGWFW CP G C+Y+HALP GFVLKKDKK EEK ++ ISLEDLIE
Sbjct: 180 VCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPVGFVLKKDKKNEEKNEEEISLEDLIE 239
Query: 59 RERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMF 118
ER+ L A+ T++TL++FLAWKKRK +EK + E+K++DFKAGR +G+SGR++F
Sbjct: 240 TERSLLGAN--VTRITLETFLAWKKRKRQEKLAKAEQDMERKKADFKAGRALGVSGREVF 297
Query: 119 SFNPDLA 125
F P+L
Sbjct: 298 EFRPELV 304
>sp|Q93618|ZC3HF_CAEEL Zinc finger CCCH domain-containing protein 15 homolog
OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3
Length = 374
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 111/158 (70%), Gaps = 7/158 (4%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNG-PTCIYKHALPPGFVLKKDKK--KEEKKDQISLEDLI 57
+CKYF+EAVEN+KYGWFW CPNG C Y+H LP G+VLKK++K +++K+D+IS+E+L+
Sbjct: 166 VCKYFLEAVENNKYGWFWECPNGGEKCQYRHCLPEGYVLKKERKAMEQQKEDEISIEELV 225
Query: 58 ERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDM 117
E+ERAAL+ S TK+TL +F+AWKK+KL+E+ E ++K+ K+G+ G+SGRD+
Sbjct: 226 EKERAALS-SKNLTKLTLQTFIAWKKKKLRERKEKEEADLKEKKEKIKSGKHNGMSGRDL 284
Query: 118 FSFNPDLAKDDMDEGDEAFDSYTRDEEEDPESNYRELD 155
F ++ +L +D DEA D EE D E+D
Sbjct: 285 FLYDANLVNND---DDEAGDIEMEKEEVDENEKVFEID 319
>sp|A8WMM4|ZC3HF_CAEBR Zinc finger CCCH domain-containing protein 15 homolog
OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=2
Length = 374
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 107/158 (67%), Gaps = 7/158 (4%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEE--KKDQISLEDLI 57
+CKYF+EAVEN+KYGWFW CPNG C Y+H LP G+VLKKD+K E K+D+IS+E+L+
Sbjct: 164 VCKYFLEAVENNKYGWFWECPNGGDKCQYRHCLPEGYVLKKDRKAMEAQKEDEISIEELV 223
Query: 58 ERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDM 117
E+ERAAL S TK+TL +F+AWKK+KLKE+ E + K+ K+G+ G+SGRD+
Sbjct: 224 EKERAALN-SKDLTKLTLQTFVAWKKKKLKERKEKEEADLKAKKEKIKSGKHNGMSGRDL 282
Query: 118 FSFNPDLAKDDMDEGDEAFDSYTRDEEEDPESNYRELD 155
F F+ +L +D DEA D EE D E+D
Sbjct: 283 FLFDANLINND---DDEAGDIEMEKEEVDENEKVFEID 317
>sp|Q9USV4|MEP33_SCHPO mRNA export protein 33 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mep33 PE=2 SV=1
Length = 292
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 9/146 (6%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
+CK+F+EA E KYGW W CPNG TCIYKHALP G+VL +DKKK++ K++ISLE IE
Sbjct: 139 VCKFFLEACETGKYGWLWQCPNGNMTCIYKHALPYGYVLSRDKKKDDTKEEISLEAFIEI 198
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
ER L + T VT ++F W + + + K E++RS+ GR LSGR+ F
Sbjct: 199 ERHRLGPN--LTPVTEENFKKWSD----GRRDRILKQAEERRSNRAVGRS-NLSGREYFE 251
Query: 120 FNPDLAKDDM-DEGDEAFDSYTRDEE 144
N D + + DE D F + R+ E
Sbjct: 252 SNKDKTHEVVGDEEDWDFSALRRETE 277
>sp|Q54DA5|ZC3HF_DICDI Zinc finger CCCH domain-containing protein 15 homolog
OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1
Length = 373
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIER 59
ICK+F++A+E+ KYGWFW CPNG C Y+H LP G+ LK KKK ++D++ + E
Sbjct: 172 ICKFFLDAIESKKYGWFWECPNGGEKCAYQHCLPEGYQLK--KKKSREEDEVEEIPIEEL 229
Query: 60 ERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFS 119
A +K T VTL++FL WK+ K +K +A A++K+ +D KAG+ +SGR+MF
Sbjct: 230 IEEERAKLTKSTPVTLETFLRWKEEKRLQKEKAAKDAQDKRLADIKAGK-TSMSGREMFV 288
Query: 120 FNPDLAKDD 128
FNPDL DD
Sbjct: 289 FNPDLFVDD 297
>sp|Q9SK74|C3H21_ARATH Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis
thaliana GN=At2g20280 PE=4 SV=1
Length = 371
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 8/123 (6%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGPT-CIYKHALPPGFVLKKDKK---KEEKKDQISLEDL 56
+CKYF++AVE +YGWFWSCPNG C Y+HALPPG+VLK K +EE ++++ED
Sbjct: 164 VCKYFLDAVEKKQYGWFWSCPNGGKECHYRHALPPGYVLKSQMKALLEEESSKKLAVEDE 223
Query: 57 IERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAE-EKKRSDFKAGRQVGLSGR 115
IE ERA L +++ T F+ WK++K+ E+ + ++ E+ ++D +GR++ LS
Sbjct: 224 IENERAKLQTATQMTPAL---FMEWKRKKIAERDAGLAASQAERAKNDRMSGRELFLSNA 280
Query: 116 DMF 118
+F
Sbjct: 281 SLF 283
>sp|Q0JHZ2|C3H11_ORYSJ Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa
subsp. japonica GN=Os01g0834700 PE=2 SV=2
Length = 366
Score = 106 bits (264), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 18/148 (12%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGPT-CIYKHALPPGFVLKKDKKK--EEKKDQISLEDLI 57
+CKYF++AVE +YGWFW CPNG C Y+HALPPG+VLK K EE+ ++I++ED I
Sbjct: 165 VCKYFLDAVEKKQYGWFWVCPNGGKDCHYRHALPPGYVLKSQMKALLEEESEKIAIEDEI 224
Query: 58 ERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAE-EKKRSDFKAGRQVGLSGRD 116
E +R + + T +T D F+ WK++K +E+ + E+ ++D +SGR+
Sbjct: 225 EDQRKKVKTT---TPMTTDLFMEWKRKKAEEREAGLAALRAERAKND-------RMSGRE 274
Query: 117 MFSFNPDLAKDDMDEGDEAFDSYTRDEE 144
+F + + DD EA+D Y R EE
Sbjct: 275 LFMADSSVFVDDA----EAYDVYERQEE 298
>sp|Q12000|TMA46_YEAST Translation machinery-associated protein 46 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA46 PE=1
SV=2
Length = 345
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 83/142 (58%), Gaps = 14/142 (9%)
Query: 1 ICKYFIEAVENSKYGWFWSCPNGP-TCIYKHALPPGFVLKKDKKKE------EKKDQISL 53
+CKYFIEAVEN KYGWFW CPNG C+Y+H+LP GFVLK +++K EK+ +I+L
Sbjct: 163 VCKYFIEAVENGKYGWFWICPNGGDKCMYRHSLPEGFVLKTNEQKRLERESLEKQPKITL 222
Query: 54 EDLIERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLS 113
E+ IE ER L SK T +T+ +F WKK + K A K K++ GR++ L
Sbjct: 223 EEFIETERGKL-DKSKLTPITIANFAQWKKDHVIAKINAEKKLSSKRKP---TGREIILK 278
Query: 114 GRDMFSFNPDLAKDDMDEGDEA 135
M + N D+ D D+
Sbjct: 279 ---MSAENKSFETDNADMPDDV 297
>sp|Q9QYX7|PCLO_MOUSE Protein piccolo OS=Mus musculus GN=Pclo PE=1 SV=4
Length = 5068
Score = 36.6 bits (83), Expect = 0.097, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 22 NGPTCIYKHALPPGFVLKKDKKKEEKKDQISLEDLIERERAALAASSKFTKVTLDSFLAW 81
N P K G ++ K+E+ + ED I ++ ++A + + F+
Sbjct: 1456 NSPVARRKRRTSIGSSSSEEYKQEDSQGSGEDEDFIRKQIIEMSADEDASGSEDEEFIRS 1515
Query: 82 KKRKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFSFNPDLAKDDM--DEGDEAFDSY 139
+ +++ +E+ + E K + AG+ L+ + SF+ D + DE DE FD
Sbjct: 1516 QLKEIGGVTESQKREETKGKGKSPAGKHRRLTRKSSTSFDDDAGRRHSWHDEDDETFD-- 1573
Query: 140 TRDEEEDPESNYRE 153
E PE +RE
Sbjct: 1574 -----ESPELKFRE 1582
>sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4
Length = 5065
Score = 35.0 bits (79), Expect = 0.30, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 43 KKEEKKDQISLEDLIERERAALAASSKFTKVTLDSFLAWKKRKLKEKSEAMTKAEEKKRS 102
K+E+ + ED I ++ ++A + D F+ + +++ +E+ K E K +
Sbjct: 1473 KQEDSQGSGEEEDFIRKQIIEMSADEDASGSEDDEFIRNQLKEISSSTESQKKEETKGKG 1532
Query: 103 DFKAGRQVGLSGRDMFSFNPDLAKDDM--DEGDEAFDSYTRDEEEDPESNYRE 153
AG+ L+ + S + D + DE DEAFD E PE YRE
Sbjct: 1533 KITAGKHRRLTRKSSTSIDEDAGRRHSWHDEDDEAFD-------ESPELKYRE 1578
>sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens
GN=MKRN2 PE=2 SV=2
Length = 416
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 16/65 (24%)
Query: 2 CKYFIEAVENSKYGWFWSCPNGPTCIYKHALPPGFVLKKDKKKEEKKDQ--------ISL 53
CKYF E K +CP G C+Y+HA P G + + +K +++ Q + L
Sbjct: 327 CKYF----EQGK----GTCPFGSKCLYRHAYPDGRLAEPEKPRKQLSSQGTVRFFNSVRL 378
Query: 54 EDLIE 58
D IE
Sbjct: 379 WDFIE 383
>sp|P0C8M4|CG041_DANRE UPF0452 protein C7orf41 homolog OS=Danio rerio GN=ch211-149a19.1
PE=3 SV=1
Length = 133
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 119 SFNPDLAKDDMDEGDEAFDSYTRDEEEDPESNYREL 154
SF P L D+D D+ FD Y D EE+PE +++++
Sbjct: 95 SFRPLLGLPDID--DDTFDQYHADVEEEPEPDHQQM 128
>sp|Q9ERV1|MKRN2_MOUSE Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus
GN=Mkrn2 PE=2 SV=2
Length = 416
Score = 30.0 bits (66), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 8/45 (17%)
Query: 2 CKYFIEAVENSKYGWFWSCPNGPTCIYKHALPPGFVLKKDKKKEE 46
CKYF E K +CP G C+Y+HA P G + + +K +++
Sbjct: 327 CKYF----EQGK----GTCPFGSKCLYRHAYPDGRLAEPEKPRKQ 363
>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
Length = 3198
Score = 30.0 bits (66), Expect = 9.9, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 32 LPPGFVLKKDK-KKEEKKDQISLE---DLIERERAALAASSKFTKVTLDSFLAWK----K 83
LPPG++ +DK KEE+ I E D + E A AS A + K
Sbjct: 705 LPPGYLENRDKLMKEEQSSAIKTETPDDSDDSEFEAKEASDDDENTISKQEEAEQEIDHK 764
Query: 84 RKLKEKSEAMTKAEEKKRSDFKAGRQVGLSGRDMFSFNPDLAKDD----MDEGDEAFDSY 139
+++ E + E+ + +K+ + R + +P+L DD +D +E+ D+
Sbjct: 765 KEIDELEADNDLSVEQLLAKYKSEQPPSPKRRKLAPRDPELDSDDDSTAVDSTEESEDAA 824
Query: 140 TRDEEE 145
T DEE+
Sbjct: 825 TEDEED 830
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,381,514
Number of Sequences: 539616
Number of extensions: 3019093
Number of successful extensions: 12903
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 12360
Number of HSP's gapped (non-prelim): 630
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)