Query psy12938
Match_columns 612
No_of_seqs 445 out of 2687
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 23:34:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1a0r_P Phosducin, MEKA, PP33; 100.0 2.5E-34 8.5E-39 289.6 13.0 193 406-601 17-234 (245)
2 2trc_P Phosducin, MEKA, PP33; 100.0 7.2E-34 2.5E-38 281.9 5.7 189 406-597 4-217 (217)
3 3evi_A Phosducin-like protein 99.9 2.3E-24 7.9E-29 193.1 12.6 109 485-597 10-118 (118)
4 2dbc_A PDCL2, unnamed protein 99.8 2.5E-18 8.5E-23 157.0 13.1 109 485-597 17-125 (135)
5 3zzx_A Thioredoxin; oxidoreduc 99.7 1.5E-17 5.3E-22 145.4 13.0 95 487-591 10-104 (105)
6 2av4_A Thioredoxin-like protei 99.7 8.1E-18 2.8E-22 156.2 10.8 95 487-589 31-135 (160)
7 2qsi_A Putative hydrogenase ex 99.7 3.2E-17 1.1E-21 149.5 10.7 95 487-591 24-121 (137)
8 2qgv_A Hydrogenase-1 operon pr 99.7 1.3E-17 4.3E-22 152.8 6.2 100 481-591 20-123 (140)
9 3egg_C Spinophilin; PP1, serin 99.7 3E-16 1E-20 149.1 11.0 136 181-378 11-150 (170)
10 4euy_A Uncharacterized protein 99.6 1E-15 3.5E-20 132.5 9.0 87 497-591 17-103 (105)
11 2xkx_A Disks large homolog 4; 99.6 2.9E-14 9.8E-19 164.5 21.8 97 1-97 110-245 (721)
12 1gh2_A Thioredoxin-like protei 99.6 2.3E-14 7.8E-19 124.1 11.8 85 497-590 20-104 (107)
13 3qfa_C Thioredoxin; protein-pr 99.5 1.2E-14 4E-19 128.6 9.2 84 498-590 31-114 (116)
14 3f3q_A Thioredoxin-1; His TAG, 99.5 4.5E-14 1.5E-18 123.3 12.8 85 498-591 24-108 (109)
15 1v98_A Thioredoxin; oxidoreduc 99.5 2.9E-14 1E-18 130.0 11.8 94 486-590 41-135 (140)
16 3gnj_A Thioredoxin domain prot 99.5 4.5E-14 1.5E-18 122.5 11.6 96 486-591 12-108 (111)
17 3gix_A Thioredoxin-like protei 99.5 5.9E-14 2E-18 130.2 12.5 95 488-591 14-119 (149)
18 3m9j_A Thioredoxin; oxidoreduc 99.5 6.9E-14 2.3E-18 120.1 11.6 85 497-590 19-103 (105)
19 2l6c_A Thioredoxin; oxidoreduc 99.5 4.1E-14 1.4E-18 123.8 10.1 87 498-592 19-105 (110)
20 2oe3_A Thioredoxin-3; electron 99.5 7.8E-14 2.7E-18 123.0 11.4 84 498-590 30-113 (114)
21 3d6i_A Monothiol glutaredoxin- 99.5 9.3E-14 3.2E-18 121.2 11.4 95 487-590 10-106 (112)
22 2ppt_A Thioredoxin-2; thiredox 99.5 1.5E-13 5.1E-18 128.3 12.6 86 497-590 63-149 (155)
23 1r26_A Thioredoxin; redox-acti 99.5 1.4E-13 4.9E-18 123.6 11.8 85 497-590 36-120 (125)
24 3die_A Thioredoxin, TRX; elect 99.5 2.1E-13 7.2E-18 117.1 12.0 86 497-590 18-104 (106)
25 1xfl_A Thioredoxin H1; AT3G510 99.5 1.5E-13 5.2E-18 123.1 11.4 85 498-591 38-122 (124)
26 1syr_A Thioredoxin; SGPP, stru 99.5 3E-13 1E-17 118.2 12.6 84 498-590 26-109 (112)
27 2voc_A Thioredoxin; electron t 99.5 2.2E-13 7.6E-18 119.2 11.7 93 487-591 10-103 (112)
28 2vlu_A Thioredoxin, thioredoxi 99.5 2.1E-13 7.2E-18 120.8 11.6 85 498-591 34-118 (122)
29 2trx_A Thioredoxin; electron t 99.5 3.8E-13 1.3E-17 116.2 12.7 93 488-590 12-105 (108)
30 2i4a_A Thioredoxin; acidophIle 99.5 4.8E-13 1.7E-17 115.0 12.6 94 488-591 12-106 (107)
31 2pu9_C TRX-F, thioredoxin F-ty 99.5 1.9E-13 6.5E-18 119.1 10.0 85 497-590 23-108 (111)
32 1w4v_A Thioredoxin, mitochondr 99.5 5.1E-13 1.7E-17 118.3 12.9 95 486-590 21-116 (119)
33 3hz4_A Thioredoxin; NYSGXRC, P 99.5 2.5E-13 8.5E-18 124.1 11.1 95 486-590 14-109 (140)
34 1t00_A Thioredoxin, TRX; redox 99.5 3.9E-13 1.3E-17 117.0 11.9 93 488-590 15-108 (112)
35 3emx_A Thioredoxin; structural 99.5 1.5E-13 5.1E-18 124.9 9.2 84 500-592 33-125 (135)
36 2vim_A Thioredoxin, TRX; thior 99.5 5.3E-13 1.8E-17 114.2 12.1 85 497-590 18-102 (104)
37 2o8v_B Thioredoxin 1; disulfid 99.4 4.5E-13 1.6E-17 120.7 12.1 86 497-590 39-125 (128)
38 2f51_A Thioredoxin; electron t 99.4 4.6E-13 1.6E-17 118.7 11.9 87 498-593 23-113 (118)
39 2wz9_A Glutaredoxin-3; protein 99.4 7.9E-13 2.7E-17 122.7 14.0 85 498-591 32-116 (153)
40 1ep7_A Thioredoxin CH1, H-type 99.4 3.3E-13 1.1E-17 117.3 10.7 85 498-591 24-109 (112)
41 3ul3_B Thioredoxin, thioredoxi 99.4 1.7E-13 5.9E-18 123.0 9.1 87 497-591 41-128 (128)
42 2xc2_A Thioredoxinn; oxidoredu 99.4 4.3E-13 1.5E-17 118.1 11.3 84 497-590 32-115 (117)
43 3d22_A TRXH4, thioredoxin H-ty 99.4 2.4E-13 8.2E-18 123.5 9.9 85 498-591 46-130 (139)
44 1xwb_A Thioredoxin; dimerizati 99.4 7.8E-13 2.7E-17 113.5 12.4 85 498-591 20-105 (106)
45 3tco_A Thioredoxin (TRXA-1); d 99.4 6.4E-13 2.2E-17 114.5 11.8 86 498-591 21-107 (109)
46 1fb6_A Thioredoxin M; electron 99.4 9.8E-13 3.3E-17 112.7 12.7 93 488-590 10-103 (105)
47 3uvt_A Thioredoxin domain-cont 99.4 6.4E-13 2.2E-17 115.0 11.6 85 499-591 22-110 (111)
48 2e0q_A Thioredoxin; electron t 99.4 8.6E-13 3E-17 112.3 12.2 85 498-590 16-100 (104)
49 1faa_A Thioredoxin F; electron 99.4 5.5E-13 1.9E-17 118.5 11.3 84 498-590 37-121 (124)
50 1dby_A Chloroplast thioredoxin 99.4 6.2E-13 2.1E-17 114.6 10.9 95 486-590 9-104 (107)
51 3cxg_A Putative thioredoxin; m 99.4 4.8E-13 1.6E-17 121.3 10.6 85 497-591 39-127 (133)
52 1thx_A Thioredoxin, thioredoxi 99.4 1E-12 3.5E-17 114.5 12.3 87 497-591 24-111 (115)
53 3qou_A Protein YBBN; thioredox 99.4 4.7E-13 1.6E-17 136.8 11.3 88 496-591 24-112 (287)
54 1ti3_A Thioredoxin H, PTTRXH1; 99.4 6.3E-13 2.2E-17 115.6 10.5 85 497-590 25-109 (113)
55 3p2a_A Thioredoxin 2, putative 99.4 1.1E-12 3.6E-17 120.7 11.8 87 497-591 54-141 (148)
56 1nsw_A Thioredoxin, TRX; therm 99.4 9.9E-13 3.4E-17 112.9 10.7 85 498-590 17-102 (105)
57 2vm1_A Thioredoxin, thioredoxi 99.4 1.3E-12 4.6E-17 114.4 11.4 84 499-591 29-112 (118)
58 1x5d_A Protein disulfide-isome 99.4 1.2E-12 4E-17 117.5 11.2 94 488-591 17-115 (133)
59 2i1u_A Thioredoxin, TRX, MPT46 99.4 1.1E-12 3.9E-17 115.6 10.8 93 488-590 22-115 (121)
60 1qgv_A Spliceosomal protein U5 99.4 2.3E-12 7.8E-17 118.5 13.3 82 488-571 14-96 (142)
61 2j23_A Thioredoxin; immune pro 99.4 1E-12 3.5E-17 116.8 10.3 86 497-591 32-119 (121)
62 3dxb_A Thioredoxin N-terminall 99.4 1.6E-12 5.6E-17 128.3 12.3 95 488-592 22-117 (222)
63 2l5l_A Thioredoxin; structural 99.4 1.6E-12 5.5E-17 118.0 11.2 86 497-591 37-124 (136)
64 2yzu_A Thioredoxin; redox prot 99.4 2.2E-12 7.7E-17 110.9 11.6 85 499-591 19-104 (109)
65 3h79_A Thioredoxin-like protei 99.4 8.1E-13 2.8E-17 118.3 9.0 87 498-592 33-127 (127)
66 3hxs_A Thioredoxin, TRXP; elec 99.4 1.2E-12 4E-17 119.1 10.2 86 497-591 50-137 (141)
67 2dj0_A Thioredoxin-related tra 99.4 5.3E-13 1.8E-17 121.2 7.2 77 497-574 25-109 (137)
68 3aps_A DNAJ homolog subfamily 99.4 8.4E-13 2.9E-17 116.9 8.2 100 486-591 11-111 (122)
69 2l57_A Uncharacterized protein 99.4 1.7E-12 5.7E-17 115.8 9.8 89 497-593 25-117 (126)
70 2es7_A Q8ZP25_salty, putative 99.4 4.8E-13 1.7E-17 123.3 6.4 84 500-591 36-123 (142)
71 2dj1_A Protein disulfide-isome 99.4 2.1E-12 7.1E-17 117.1 9.8 85 498-591 34-122 (140)
72 3iv4_A Putative oxidoreductase 99.4 2.7E-13 9.1E-18 119.0 3.7 84 498-588 24-111 (112)
73 1oaz_A Thioredoxin 1; immune s 99.3 9.2E-13 3.1E-17 117.9 7.2 93 488-590 13-120 (123)
74 3ga4_A Dolichyl-diphosphooligo 99.3 1.7E-12 5.9E-17 123.7 9.5 104 486-591 26-151 (178)
75 1x5e_A Thioredoxin domain cont 99.3 2.6E-12 8.7E-17 114.6 9.4 83 501-592 25-109 (126)
76 3dml_A Putative uncharacterize 99.3 3.3E-12 1.1E-16 113.3 9.3 87 497-589 17-110 (116)
77 2dml_A Protein disulfide-isome 99.3 2.6E-12 8.8E-17 115.0 7.5 85 498-590 35-121 (130)
78 1zma_A Bacterocin transport ac 99.3 2.1E-12 7.1E-17 113.9 5.7 83 499-589 30-117 (118)
79 1z6n_A Hypothetical protein PA 99.3 1.3E-11 4.6E-16 116.7 11.2 73 497-570 53-129 (167)
80 2fwh_A Thiol:disulfide interch 99.3 3.4E-12 1.2E-16 115.6 6.4 86 498-591 31-126 (134)
81 3fk8_A Disulphide isomerase; A 99.3 5.1E-12 1.7E-16 113.7 7.5 92 498-590 29-130 (133)
82 2yj7_A LPBCA thioredoxin; oxid 98.9 4.3E-13 1.5E-17 114.7 0.0 100 481-590 4-104 (106)
83 1fo5_A Thioredoxin; disulfide 99.3 1.3E-11 4.4E-16 101.6 8.7 80 499-590 3-83 (85)
84 1mek_A Protein disulfide isome 99.3 5.7E-12 2E-16 110.2 6.5 85 499-591 25-115 (120)
85 3apq_A DNAJ homolog subfamily 99.2 8.1E-12 2.8E-16 122.1 8.1 95 486-591 105-200 (210)
86 1nho_A Probable thioredoxin; b 99.2 1.3E-11 4.6E-16 101.5 7.9 79 500-590 3-82 (85)
87 3r0h_A INAD, inactivation-NO-a 99.2 3.6E-11 1.2E-15 117.0 12.2 97 1-97 66-197 (206)
88 2dj3_A Protein disulfide-isome 99.2 8.2E-12 2.8E-16 112.1 6.3 91 497-592 24-117 (133)
89 1a8l_A Protein disulfide oxido 99.2 3.3E-11 1.1E-15 118.3 10.2 83 500-590 136-223 (226)
90 2djj_A PDI, protein disulfide- 99.2 1.6E-11 5.5E-16 108.2 7.1 85 497-592 24-116 (121)
91 1wmj_A Thioredoxin H-type; str 99.2 1.6E-12 5.4E-17 116.1 -0.1 85 498-591 36-120 (130)
92 1wou_A Thioredoxin -related pr 99.2 4E-11 1.4E-15 106.9 9.0 93 488-590 15-122 (123)
93 3gsl_A Disks large homolog 4; 99.2 2.4E-11 8.1E-16 116.9 8.0 99 310-411 3-155 (196)
94 3gsl_A Disks large homolog 4; 99.2 1.2E-10 4.1E-15 111.9 12.7 97 1-97 56-191 (196)
95 3idv_A Protein disulfide-isome 99.1 9.4E-11 3.2E-15 115.9 9.4 85 498-591 32-120 (241)
96 3ed3_A Protein disulfide-isome 99.1 9.4E-11 3.2E-15 121.2 9.2 101 487-591 26-140 (298)
97 3f8u_A Protein disulfide-isome 99.1 1.2E-10 4.2E-15 127.7 10.7 97 487-591 10-107 (481)
98 3q6o_A Sulfhydryl oxidase 1; p 99.1 1.3E-10 4.3E-15 116.1 9.6 97 488-590 22-124 (244)
99 3ph9_A Anterior gradient prote 99.1 3.7E-11 1.3E-15 111.7 3.9 92 498-589 44-138 (151)
100 3idv_A Protein disulfide-isome 99.1 1.7E-10 5.7E-15 114.1 8.9 83 500-591 149-235 (241)
101 2kuc_A Putative disulphide-iso 99.1 1.4E-10 5E-15 103.5 7.6 85 499-591 28-119 (130)
102 2xkx_A Disks large homolog 4; 99.1 2.5E-10 8.7E-15 131.6 11.2 99 310-411 57-209 (721)
103 2djk_A PDI, protein disulfide- 99.1 1.9E-10 6.5E-15 104.2 7.8 85 498-590 23-112 (133)
104 2fgx_A Putative thioredoxin; N 99.1 2.1E-10 7.3E-15 100.2 7.4 78 499-588 29-106 (107)
105 1lu4_A Soluble secreted antige 99.0 6.5E-10 2.2E-14 99.2 10.1 85 498-591 24-134 (136)
106 2lst_A Thioredoxin; structural 98.6 2.1E-11 7E-16 109.2 0.0 85 498-590 19-113 (130)
107 2r2j_A Thioredoxin domain-cont 99.0 3.9E-10 1.3E-14 120.3 9.9 85 499-591 23-115 (382)
108 1ilo_A Conserved hypothetical 99.0 3.8E-10 1.3E-14 91.2 7.5 74 501-588 2-76 (77)
109 1a8l_A Protein disulfide oxido 99.0 9.5E-10 3.3E-14 107.8 11.7 74 497-571 21-98 (226)
110 2qt5_A Glutamate receptor-inte 99.0 2E-09 6.8E-14 104.3 13.2 96 1-96 54-195 (200)
111 3r0h_A INAD, inactivation-NO-a 99.0 1.5E-10 5.3E-15 112.5 5.2 99 312-414 18-164 (206)
112 3f9u_A Putative exported cytoc 99.0 2E-10 7E-15 108.1 5.3 86 498-590 47-163 (172)
113 2b5x_A YKUV protein, TRXY; thi 99.0 1.5E-09 5.2E-14 98.1 10.3 85 498-590 29-142 (148)
114 3erw_A Sporulation thiol-disul 99.0 1E-09 3.6E-14 98.8 9.2 84 497-588 33-144 (145)
115 1zzo_A RV1677; thioredoxin fol 99.0 1.8E-09 6E-14 96.1 10.5 84 498-590 25-132 (136)
116 2b5e_A Protein disulfide-isome 99.0 8.1E-10 2.8E-14 122.0 9.9 86 498-591 31-120 (504)
117 3gge_A PDZ domain-containing p 99.0 4.4E-10 1.5E-14 95.6 5.8 61 311-379 4-68 (95)
118 2ju5_A Thioredoxin disulfide i 99.0 8E-10 2.7E-14 102.5 8.2 86 499-590 48-149 (154)
119 3kp8_A Vkorc1/thioredoxin doma 99.0 7.1E-10 2.4E-14 96.7 7.0 73 500-588 14-90 (106)
120 2qt5_A Glutamate receptor-inte 99.0 3.8E-09 1.3E-13 102.3 12.7 44 52-95 49-92 (200)
121 1ttz_A Conserved hypothetical 99.0 6.1E-10 2.1E-14 93.7 6.0 73 502-591 3-75 (87)
122 1sji_A Calsequestrin 2, calseq 99.0 8.2E-10 2.8E-14 116.3 8.1 92 487-591 20-120 (350)
123 2e7p_A Glutaredoxin; thioredox 98.9 7.7E-10 2.6E-14 97.0 6.4 88 500-597 21-112 (116)
124 1sen_A Thioredoxin-like protei 98.9 1.7E-10 6E-15 108.4 2.1 93 498-590 46-145 (164)
125 2ywm_A Glutaredoxin-like prote 98.9 1.4E-09 4.8E-14 107.1 8.6 81 499-590 137-217 (229)
126 3f8u_A Protein disulfide-isome 98.9 1.2E-09 4.1E-14 119.8 8.8 88 497-593 369-461 (481)
127 1wf8_A Neurabin-I; PDZ domain, 98.9 9.2E-10 3.1E-14 96.0 6.2 70 309-378 6-79 (107)
128 2hls_A Protein disulfide oxido 98.9 2.5E-09 8.7E-14 107.0 10.3 81 499-591 139-224 (243)
129 3ia1_A THIO-disulfide isomeras 98.9 3.3E-09 1.1E-13 97.2 9.9 85 499-592 31-143 (154)
130 2f9s_A Thiol-disulfide oxidore 98.9 3.7E-09 1.3E-13 96.6 10.0 87 498-591 26-136 (151)
131 3us3_A Calsequestrin-1; calciu 98.9 2.2E-09 7.4E-14 114.0 9.5 85 498-591 30-122 (367)
132 2b5e_A Protein disulfide-isome 98.9 7.8E-10 2.7E-14 122.1 6.1 86 498-593 376-467 (504)
133 3qcp_A QSOX from trypanosoma b 98.9 1.4E-09 4.9E-14 118.2 7.8 65 498-563 42-115 (470)
134 3eur_A Uncharacterized protein 98.9 3.9E-09 1.3E-13 95.7 9.4 83 498-590 31-142 (142)
135 3uem_A Protein disulfide-isome 98.9 2.2E-09 7.5E-14 113.2 8.6 86 498-593 267-357 (361)
136 2h30_A Thioredoxin, peptide me 98.9 1.5E-09 5.1E-14 100.5 6.2 87 497-591 37-154 (164)
137 1i16_A Interleukin 16, LCF; cy 98.9 2.1E-09 7.2E-14 97.2 6.7 66 310-378 27-96 (130)
138 3raz_A Thioredoxin-related pro 98.9 5E-09 1.7E-13 96.0 9.4 87 497-590 23-137 (151)
139 2lrn_A Thiol:disulfide interch 98.9 5E-09 1.7E-13 96.1 9.3 83 498-590 29-138 (152)
140 3or5_A Thiol:disulfide interch 98.9 5.7E-09 1.9E-13 96.5 9.5 86 498-591 34-149 (165)
141 3gl3_A Putative thiol:disulfid 98.9 8E-09 2.7E-13 94.3 10.3 89 498-591 28-140 (152)
142 3apo_A DNAJ homolog subfamily 98.9 1.7E-09 5.8E-14 125.8 7.1 97 483-590 121-218 (780)
143 3lor_A Thiol-disulfide isomera 98.9 8.3E-09 2.9E-13 95.0 10.2 85 498-590 30-152 (160)
144 3eyt_A Uncharacterized protein 98.8 1.3E-08 4.5E-13 93.6 10.9 86 498-590 28-149 (158)
145 4evm_A Thioredoxin family prot 98.8 1.3E-08 4.4E-13 90.2 10.4 86 497-590 21-136 (138)
146 2awx_A Synapse associated prot 98.8 3.5E-09 1.2E-13 91.9 6.2 63 312-377 3-71 (105)
147 2g5m_B Neurabin-2; spinophilin 98.8 2.2E-09 7.6E-14 94.4 4.9 67 311-377 3-73 (113)
148 2fe5_A Presynaptic protein SAP 98.8 4.2E-09 1.5E-13 89.2 6.4 64 311-377 2-71 (94)
149 2qc7_A ERP31, ERP28, endoplasm 98.8 9.1E-09 3.1E-13 102.9 9.7 83 498-592 22-118 (240)
150 3fkf_A Thiol-disulfide oxidore 98.8 7.8E-09 2.7E-13 93.5 8.4 84 497-590 32-143 (148)
151 1p1d_A PDZ45, glutamate recept 98.8 3E-08 1E-12 95.7 13.0 96 1-96 57-195 (196)
152 2i1n_A Discs, large homolog 3; 98.8 5.4E-09 1.8E-13 90.1 6.7 65 310-377 2-72 (102)
153 3t58_A Sulfhydryl oxidase 1; o 98.8 5.3E-09 1.8E-13 116.0 8.3 97 488-590 22-124 (519)
154 2lja_A Putative thiol-disulfid 98.8 9.5E-09 3.2E-13 93.8 8.6 90 497-593 29-143 (152)
155 3ha9_A Uncharacterized thiored 98.8 1.8E-08 6.2E-13 93.5 10.7 87 497-591 36-162 (165)
156 3b76_A E3 ubiquitin-protein li 98.8 5.4E-09 1.8E-13 93.0 6.7 65 311-378 23-92 (118)
157 3suz_A Amyloid beta A4 precurs 98.8 2.1E-09 7.3E-14 115.0 4.7 94 1-94 253-372 (388)
158 3apo_A DNAJ homolog subfamily 98.8 7.7E-09 2.6E-13 120.2 9.5 101 485-591 664-765 (780)
159 3hcz_A Possible thiol-disulfid 98.8 5.5E-09 1.9E-13 94.5 6.4 74 497-571 30-131 (148)
160 3hdc_A Thioredoxin family prot 98.8 2.7E-08 9.3E-13 91.8 10.6 76 498-574 41-138 (158)
161 3kcm_A Thioredoxin family prot 98.8 1.9E-08 6.6E-13 91.9 9.4 89 497-590 27-140 (154)
162 2b1k_A Thiol:disulfide interch 98.8 1E-08 3.5E-13 95.5 7.2 73 497-572 50-146 (168)
163 2byg_A Channel associated prot 98.8 9.1E-09 3.1E-13 91.3 6.4 65 310-377 22-92 (117)
164 1d5g_A Human phosphatase HPTP1 98.8 9.2E-09 3.1E-13 87.5 6.2 64 311-377 4-71 (96)
165 2c0g_A ERP29 homolog, windbeut 98.7 9.9E-09 3.4E-13 103.0 7.1 81 498-591 33-130 (248)
166 2fne_A Multiple PDZ domain pro 98.7 3.9E-09 1.3E-13 93.7 3.6 63 312-377 25-91 (117)
167 1um1_A KIAA1849 protein, RSGI 98.7 1.2E-08 4.1E-13 89.2 6.5 65 310-377 6-74 (110)
168 1wi4_A Synip, syntaxin binding 98.7 8.9E-09 3.1E-13 90.2 5.5 62 312-378 15-80 (109)
169 1p1d_A PDZ45, glutamate recept 98.7 2E-08 6.8E-13 97.0 8.5 100 311-413 5-162 (196)
170 1kng_A Thiol:disulfide interch 98.7 2.1E-08 7.1E-13 91.7 8.2 84 498-589 42-148 (156)
171 3axa_A Afadin, nectin-3, prote 98.7 9.7E-09 3.3E-13 89.2 5.3 65 310-378 9-77 (106)
172 2d92_A INAD-like protein; PDZ 98.7 7.9E-09 2.7E-13 90.2 4.7 64 312-378 15-83 (108)
173 3lwa_A Secreted thiol-disulfid 98.7 1.8E-08 6.2E-13 95.4 7.5 85 498-590 59-178 (183)
174 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.1E-08 3.8E-13 89.1 5.5 66 310-378 7-81 (108)
175 2l5o_A Putative thioredoxin; s 98.7 3E-08 1E-12 90.5 8.3 85 498-590 28-138 (153)
176 3ewl_A Uncharacterized conserv 98.7 2.8E-08 9.5E-13 89.6 7.3 85 497-591 26-139 (142)
177 2jik_A Synaptojanin-2 binding 98.7 2.8E-08 9.7E-13 85.4 6.9 64 311-377 6-75 (101)
178 1ego_A Glutaredoxin; electron 98.7 3.4E-08 1.2E-12 81.3 6.9 74 502-590 3-81 (85)
179 3ira_A Conserved protein; meth 98.7 2.3E-08 7.7E-13 95.0 6.4 69 498-567 39-120 (173)
180 1o8x_A Tryparedoxin, TRYX, TXN 98.7 5.6E-08 1.9E-12 88.4 8.7 72 498-569 28-127 (146)
181 1i5g_A Tryparedoxin II; electr 98.6 6.1E-08 2.1E-12 87.8 8.7 71 498-568 28-126 (144)
182 1wjk_A C330018D20RIK protein; 98.6 2.7E-08 9.4E-13 85.5 6.0 79 497-591 14-94 (100)
183 1hyu_A AHPF, alkyl hydroperoxi 98.6 6.3E-08 2.2E-12 107.5 10.6 79 500-590 119-197 (521)
184 1ufx_A KIAA1526 protein; PDZ d 98.6 2.2E-08 7.4E-13 86.8 5.4 60 314-378 8-71 (103)
185 2db5_A INAD-like protein; PDZ 98.6 1.5E-08 5.3E-13 91.1 4.5 66 310-378 23-94 (128)
186 2lrt_A Uncharacterized protein 98.6 3.7E-08 1.3E-12 90.7 7.2 75 498-572 35-134 (152)
187 3cbz_A Dishevelled-2; PDZ doma 98.6 1.3E-08 4.4E-13 88.9 3.8 64 311-378 4-72 (108)
188 3s9f_A Tryparedoxin; thioredox 98.6 6.7E-08 2.3E-12 90.4 8.9 72 497-568 47-146 (165)
189 2ywm_A Glutaredoxin-like prote 98.6 5.8E-08 2E-12 95.4 8.9 72 500-572 22-101 (229)
190 2q9v_A Membrane-associated gua 98.6 3.2E-08 1.1E-12 83.1 6.0 60 312-377 2-65 (90)
191 2iwo_A Multiple PDZ domain pro 98.6 1E-08 3.4E-13 91.4 3.0 64 312-378 24-92 (120)
192 1o73_A Tryparedoxin; electron 98.6 5.9E-08 2E-12 87.7 8.1 71 498-568 28-126 (144)
193 3fw2_A Thiol-disulfide oxidore 98.6 7E-08 2.4E-12 88.1 8.7 73 497-569 32-134 (150)
194 4fo5_A Thioredoxin-like protei 98.6 4.4E-08 1.5E-12 88.7 7.3 83 497-589 31-141 (143)
195 2jil_A GRIP1 protein, glutamat 98.6 3.5E-08 1.2E-12 84.1 6.0 64 311-377 2-70 (97)
196 2hls_A Protein disulfide oxido 98.6 5.8E-08 2E-12 97.1 8.6 69 499-571 26-102 (243)
197 1wha_A KIAA0147 protein, scrib 98.6 2.9E-08 9.8E-13 86.1 5.2 64 311-377 6-76 (105)
198 2i04_A Membrane-associated gua 98.6 4.2E-08 1.4E-12 81.4 5.6 58 314-377 2-63 (85)
199 2daz_A INAD-like protein; PDZ 98.6 6.4E-08 2.2E-12 86.6 6.8 66 307-377 20-89 (124)
200 1uhp_A Hypothetical protein KI 98.6 5.7E-08 1.9E-12 84.5 6.1 65 310-377 6-79 (107)
201 1jfu_A Thiol:disulfide interch 98.6 2.5E-07 8.6E-12 87.6 10.9 88 498-590 60-177 (186)
202 2eno_A Synaptojanin-2-binding 98.6 8.1E-08 2.8E-12 85.3 7.0 64 311-377 16-85 (120)
203 2o2t_A Multiple PDZ domain pro 98.6 3E-08 1E-12 87.7 4.1 66 309-377 17-88 (117)
204 2hyx_A Protein DIPZ; thioredox 98.6 1.2E-07 4.2E-12 100.0 9.3 75 498-572 82-185 (352)
205 1uep_A Membrane associated gua 98.6 3.8E-08 1.3E-12 85.1 4.5 63 309-377 6-72 (103)
206 4amh_A Disks large homolog 1; 98.6 4.3E-08 1.5E-12 85.2 4.8 62 316-378 6-71 (106)
207 2vwr_A Ligand of NUMB protein 98.6 7.5E-08 2.6E-12 81.7 6.2 60 311-377 2-67 (95)
208 3o46_A Maguk P55 subfamily mem 98.6 5.5E-08 1.9E-12 82.3 5.2 60 312-378 4-67 (93)
209 3kp9_A Vkorc1/thioredoxin doma 98.5 4.4E-08 1.5E-12 100.4 5.1 73 501-589 200-276 (291)
210 3kh7_A Thiol:disulfide interch 98.5 1.3E-07 4.6E-12 89.2 8.0 72 498-572 58-153 (176)
211 1wfg_A Regulating synaptic mem 98.5 6.2E-08 2.1E-12 87.6 5.3 64 312-378 27-104 (131)
212 2cvb_A Probable thiol-disulfid 98.5 1.9E-07 6.5E-12 88.7 8.9 70 497-567 32-132 (188)
213 1ujd_A KIAA0559 protein; PDZ d 98.5 6.2E-08 2.1E-12 85.8 5.0 64 312-378 12-88 (117)
214 2k8s_A Thioredoxin; dimer, str 98.5 9.7E-08 3.3E-12 78.1 5.8 62 501-565 3-66 (80)
215 2ywi_A Hypothetical conserved 98.5 1.2E-07 4.1E-12 90.5 7.1 68 500-568 48-147 (196)
216 2la8_A Inactivation-NO-after-p 98.5 8E-08 2.7E-12 83.7 5.1 58 312-378 2-64 (106)
217 1ueq_A Membrane associated gua 98.5 1.2E-07 4E-12 84.8 6.1 63 310-378 17-83 (123)
218 2r4h_A Membrane-associated gua 98.5 9.7E-08 3.3E-12 83.8 5.5 62 310-377 22-87 (112)
219 1wg6_A Hypothetical protein (r 98.5 3E-08 1E-12 89.2 2.3 63 312-377 25-93 (127)
220 1ihj_A INAD; intermolecular di 98.5 8.1E-08 2.8E-12 81.9 4.6 63 312-377 5-75 (98)
221 2opg_A Multiple PDZ domain pro 98.5 1.5E-07 5.2E-12 80.2 6.1 61 312-377 4-68 (98)
222 2qg1_A Multiple PDZ domain pro 98.5 1.2E-07 4.3E-12 79.8 5.4 60 311-377 3-67 (92)
223 2ehr_A INAD-like protein; PDZ 98.5 1.2E-07 4.2E-12 83.7 5.5 63 312-377 15-88 (117)
224 2jre_A C60-1 PDZ domain peptid 98.5 1.5E-07 5.1E-12 81.8 5.8 65 310-377 10-82 (108)
225 2koj_A Partitioning defective 98.5 2.1E-07 7.1E-12 81.3 6.6 65 310-377 9-77 (111)
226 2lus_A Thioredoxion; CR-Trp16, 97.8 2E-08 6.8E-13 90.5 0.0 69 500-568 28-125 (143)
227 1kte_A Thioltransferase; redox 98.5 9.4E-08 3.2E-12 82.2 4.2 88 502-595 14-105 (105)
228 2kpk_A Membrane-associated gua 98.4 1.1E-07 3.7E-12 85.8 4.6 61 311-377 17-81 (129)
229 2dmz_A INAD-like protein; PDZ 98.4 1.7E-07 5.8E-12 84.3 5.8 66 310-378 13-85 (129)
230 1x6d_A Interleukin-16; PDZ dom 98.4 1.8E-07 6E-12 82.9 5.7 62 312-378 15-81 (119)
231 2ls5_A Uncharacterized protein 97.8 2.4E-08 8.2E-13 92.1 0.0 85 498-591 33-146 (159)
232 1uju_A Scribble; PDZ domain, c 98.4 1.1E-07 3.9E-12 83.1 4.1 62 314-378 11-83 (111)
233 1g9o_A NHE-RF; PDZ domain, com 98.4 2.2E-07 7.4E-12 78.1 5.6 58 312-377 3-64 (91)
234 3i4w_A Disks large homolog 4; 98.4 1.7E-07 5.7E-12 80.8 4.9 59 312-377 11-73 (104)
235 1kwa_A Hcask/LIN-2 protein; PD 98.4 2.1E-07 7.1E-12 78.1 5.2 58 313-378 2-64 (88)
236 3gge_A PDZ domain-containing p 98.4 2.6E-07 9E-12 78.4 5.7 47 51-97 43-91 (95)
237 1n7e_A AMPA receptor interacti 98.4 2.4E-07 8.3E-12 78.9 5.5 61 311-377 4-68 (97)
238 2w4f_A Protein LAP4; structura 98.4 3.2E-07 1.1E-11 78.0 6.1 63 311-377 2-71 (97)
239 2rli_A SCO2 protein homolog, m 98.4 7.1E-07 2.4E-11 82.9 9.0 75 497-571 25-149 (171)
240 1mfg_A ERB-B2 interacting prot 98.4 4.1E-07 1.4E-11 77.1 6.6 62 313-377 4-71 (95)
241 3drn_A Peroxiredoxin, bacterio 98.4 9.1E-07 3.1E-11 82.0 9.3 70 500-570 31-129 (161)
242 3nfk_A Tyrosine-protein phosph 98.4 1.9E-07 6.4E-12 81.1 4.2 62 310-377 15-82 (107)
243 3hpk_A Protein interacting wit 98.4 3.8E-07 1.3E-11 81.5 6.3 61 312-378 19-84 (125)
244 2qkv_A Inactivation-NO-after-p 98.4 1.9E-07 6.3E-12 79.6 4.0 59 310-377 6-69 (96)
245 1xvw_A Hypothetical protein RV 98.4 1.2E-06 4E-11 80.7 9.7 89 500-591 38-158 (160)
246 2iwn_A Multiple PDZ domain pro 98.4 3.6E-07 1.2E-11 77.4 5.7 64 311-377 3-71 (97)
247 2k6v_A Putative cytochrome C o 98.4 8.7E-07 3E-11 82.3 8.8 89 497-590 34-170 (172)
248 1qav_A Alpha-1 syntrophin (res 98.4 2.3E-07 7.7E-12 77.9 4.2 60 312-377 4-68 (90)
249 2dlu_A INAD-like protein; PDZ 98.4 3.1E-07 1.1E-11 80.2 5.2 58 312-377 15-76 (111)
250 3l4f_D SH3 and multiple ankyri 98.4 4.1E-07 1.4E-11 82.3 6.1 59 315-377 30-102 (132)
251 2djt_A Unnamed protein product 98.4 2.3E-07 7.9E-12 80.0 4.2 63 311-377 10-76 (104)
252 2dkr_A LIN-7 homolog B; LIN-7B 98.4 3.2E-07 1.1E-11 77.3 5.0 58 314-377 7-68 (93)
253 4e34_A Golgi-associated PDZ an 98.4 2.2E-07 7.5E-12 77.4 3.9 59 313-377 3-66 (87)
254 1r6j_A Syntenin 1; PDZ, membra 98.4 2.4E-07 8.1E-12 76.8 4.0 53 312-378 4-61 (82)
255 2csj_A TJP2 protein; PDZ domai 98.3 3.5E-07 1.2E-11 80.8 5.3 64 310-378 12-83 (117)
256 2dc2_A GOPC, golgi associated 98.3 2.7E-07 9.2E-12 79.7 4.3 60 312-377 9-73 (103)
257 1wif_A RSGI RUH-020, riken cDN 98.3 1.9E-07 6.4E-12 83.9 3.2 58 312-378 27-88 (126)
258 3suz_A Amyloid beta A4 precurs 98.3 1.1E-07 3.7E-12 101.7 1.6 100 310-414 202-342 (388)
259 3u5r_E Uncharacterized protein 98.3 1.1E-06 3.7E-11 86.1 8.6 88 500-590 61-184 (218)
260 2ggt_A SCO1 protein homolog, m 98.3 1.2E-06 4.2E-11 80.6 8.4 85 498-589 23-157 (164)
261 2uzc_A Human pdlim5, PDZ and L 98.3 4.4E-07 1.5E-11 75.7 4.7 58 312-377 3-64 (88)
262 2ejy_A 55 kDa erythrocyte memb 98.3 6.2E-07 2.1E-11 76.8 5.7 57 313-377 13-74 (97)
263 2hze_A Glutaredoxin-1; thiored 98.3 1.5E-07 5.2E-12 82.6 1.8 87 501-595 20-112 (114)
264 2he4_A Na(+)/H(+) exchange reg 98.3 5.9E-07 2E-11 75.3 5.2 57 313-377 5-65 (90)
265 1n7t_A 99-MER peptide of densi 98.3 4.3E-07 1.5E-11 78.3 4.4 63 312-377 11-79 (103)
266 1va8_A Maguk P55 subfamily mem 98.3 3.9E-07 1.3E-11 80.1 4.1 58 311-377 24-86 (113)
267 1v62_A KIAA1719 protein; struc 98.3 4.3E-07 1.5E-11 80.3 4.3 62 312-378 15-81 (117)
268 2cs5_A Tyrosine-protein phosph 98.3 4.4E-07 1.5E-11 80.4 4.3 60 312-377 15-80 (119)
269 2h2b_A Tight junction protein 98.3 1.2E-06 4.2E-11 75.8 7.0 62 311-377 6-75 (107)
270 2kom_A Partitioning defective 98.3 1E-06 3.4E-11 78.4 6.5 64 311-377 29-96 (121)
271 1r6j_A Syntenin 1; PDZ, membra 98.3 1.3E-06 4.4E-11 72.3 6.5 41 54-94 40-80 (82)
272 1m5z_A GRIP, AMPA receptor int 98.3 1.1E-06 3.7E-11 73.8 6.1 60 310-377 4-69 (91)
273 1w9e_A Syntenin 1; cell adhesi 98.3 3.8E-06 1.3E-10 78.7 10.6 93 1-93 47-163 (166)
274 1tp5_A Presynaptic density pro 98.3 6.5E-07 2.2E-11 79.2 5.0 59 312-377 14-76 (119)
275 1x5q_A LAP4 protein; PDZ domai 98.3 1.2E-06 4.1E-11 76.4 6.5 63 311-377 14-83 (110)
276 1we0_A Alkyl hydroperoxide red 98.2 1.7E-06 5.7E-11 82.2 7.9 76 497-572 30-139 (187)
277 2q3g_A PDZ and LIM domain prot 98.2 9.1E-07 3.1E-11 74.0 5.2 59 311-377 2-64 (89)
278 1nf3_C PAR-6B; semi-CRIB motif 98.2 2.8E-07 9.6E-12 82.9 2.0 64 312-378 29-104 (128)
279 3qe1_A Sorting nexin-27, G pro 98.2 1E-06 3.4E-11 76.4 5.5 61 313-377 7-80 (107)
280 2bmx_A Alkyl hydroperoxidase C 98.2 2.1E-06 7E-11 82.3 8.2 92 497-591 44-168 (195)
281 3soe_A Membrane-associated gua 98.2 1.1E-06 3.8E-11 77.2 5.6 56 311-378 11-70 (113)
282 3uem_A Protein disulfide-isome 98.2 4.3E-06 1.5E-10 87.7 11.0 87 500-591 137-228 (361)
283 2dlx_A UBX domain-containing p 98.2 1.7E-06 5.6E-11 80.4 6.7 99 498-600 42-147 (153)
284 2f5y_A Regulator of G-protein 98.2 1.1E-06 3.7E-11 74.0 4.9 56 311-377 2-61 (91)
285 1v6b_A Harmonin isoform A1; st 98.2 1.1E-06 3.7E-11 77.9 5.1 60 313-378 19-82 (118)
286 1wfv_A Membrane associated gua 98.2 2.4E-07 8.2E-12 79.7 0.8 61 311-377 10-74 (103)
287 3e17_A Tight junction protein 98.2 1.1E-06 3.7E-11 73.6 4.8 52 315-378 3-60 (88)
288 3cmi_A Peroxiredoxin HYR1; thi 98.2 1.3E-06 4.5E-11 81.6 5.7 74 497-571 31-153 (171)
289 1rgw_A ZAsp protein; PDZ, cyph 98.2 7.9E-07 2.7E-11 73.6 3.6 56 314-377 3-62 (85)
290 1z87_A Alpha-1-syntrophin; pro 98.2 4.6E-07 1.6E-11 91.4 2.6 60 312-377 77-141 (263)
291 2v90_A PDZ domain-containing p 98.2 1.3E-06 4.3E-11 74.2 4.9 60 313-377 4-67 (96)
292 2vup_A Glutathione peroxidase- 98.2 1.9E-06 6.7E-11 82.1 6.8 85 498-589 48-181 (190)
293 2yt7_A Amyloid beta A4 precurs 98.2 2.3E-06 7.7E-11 73.5 6.5 62 312-377 9-75 (101)
294 1zof_A Alkyl hydroperoxide-red 98.2 3.6E-06 1.2E-10 80.7 8.6 92 497-591 32-159 (198)
295 2gzv_A PRKCA-binding protein; 98.2 1.6E-06 5.6E-11 76.3 5.5 60 312-377 24-88 (114)
296 3k1r_A Harmonin; protein-prote 98.1 1.5E-06 5.1E-11 83.7 5.3 63 309-378 81-148 (192)
297 2p5q_A Glutathione peroxidase 98.1 2.7E-06 9.1E-11 78.8 6.7 42 497-538 31-74 (170)
298 2dm8_A INAD-like protein; PDZ 98.1 5.6E-07 1.9E-11 79.2 1.9 60 313-377 18-81 (116)
299 3r68_A Na(+)/H(+) exchange reg 98.1 1.2E-06 4.2E-11 74.0 3.6 56 314-377 7-66 (95)
300 1wi2_A Riken cDNA 2700099C19; 98.1 2E-06 6.8E-11 74.2 5.0 58 313-377 16-78 (104)
301 2pa1_A PDZ and LIM domain prot 98.1 1.8E-06 6.1E-11 71.9 4.3 55 315-377 5-63 (87)
302 2p31_A CL683, glutathione pero 98.1 1.1E-06 3.6E-11 83.3 3.3 86 498-590 49-178 (181)
303 2dls_A PDZ-rhogef, RHO guanine 98.1 3.3E-06 1.1E-10 71.3 5.9 55 312-377 8-66 (93)
304 1w9e_A Syntenin 1; cell adhesi 98.1 3.4E-06 1.2E-10 79.0 6.4 88 312-410 4-130 (166)
305 2vsp_A PDZ domain-containing p 98.1 7.3E-07 2.5E-11 74.9 1.5 57 313-377 4-64 (91)
306 1h75_A Glutaredoxin-like prote 98.1 3.9E-06 1.3E-10 68.2 5.8 72 502-592 3-77 (81)
307 2ego_A General receptor for ph 98.1 3.1E-06 1E-10 71.9 5.3 64 313-377 5-74 (96)
308 2v1m_A Glutathione peroxidase; 98.1 4.7E-06 1.6E-10 77.0 7.1 42 497-538 30-73 (169)
309 1v5q_A GRIP1 homolog, glutamat 98.1 4.4E-06 1.5E-10 74.3 6.5 65 310-377 13-83 (122)
310 1uul_A Tryparedoxin peroxidase 98.1 8.4E-06 2.9E-10 78.5 9.0 89 498-589 36-161 (202)
311 3dwv_A Glutathione peroxidase- 98.1 4.7E-06 1.6E-10 79.3 7.1 42 497-538 45-88 (187)
312 3bpu_A Membrane-associated gua 98.1 3.9E-06 1.3E-10 69.9 5.7 57 311-377 2-62 (88)
313 1uew_A Membrane associated gua 98.1 4.3E-06 1.5E-10 73.3 6.0 63 312-377 10-81 (114)
314 3e17_A Tight junction protein 98.1 7.1E-06 2.4E-10 68.6 7.0 50 48-97 33-82 (88)
315 2fcf_A Multiple PDZ domain pro 98.1 3.1E-06 1.1E-10 72.6 4.9 63 312-377 4-77 (103)
316 1q3o_A Shank1; PDZ, GKAP, pept 98.1 6.3E-06 2.2E-10 71.6 6.9 61 313-377 8-82 (109)
317 3soe_A Membrane-associated gua 98.1 5.8E-06 2E-10 72.6 6.6 46 52-97 47-94 (113)
318 1qmv_A Human thioredoxin perox 98.1 1.1E-05 3.9E-10 77.2 9.3 90 498-590 34-160 (197)
319 1zye_A Thioredoxin-dependent p 98.1 1.2E-05 4.2E-10 78.8 9.7 90 498-590 56-182 (220)
320 3kzd_A TIAM-1, T-lymphoma inva 98.1 4.2E-06 1.5E-10 71.0 5.5 60 312-377 6-72 (94)
321 2e7k_A Maguk P55 subfamily mem 98.0 1.4E-06 4.8E-11 73.4 2.5 54 314-377 8-66 (91)
322 1wf7_A Enigma homologue protei 98.0 1.7E-06 5.8E-11 74.5 3.0 58 312-377 5-66 (103)
323 2obi_A PHGPX, GPX-4, phospholi 98.0 3.6E-06 1.2E-10 79.6 5.4 41 498-538 47-89 (183)
324 2d90_A PDZ domain containing p 98.0 3.2E-06 1.1E-10 72.5 4.5 57 313-377 7-67 (102)
325 2h01_A 2-Cys peroxiredoxin; th 98.0 9E-06 3.1E-10 77.5 8.0 89 498-589 31-155 (192)
326 2jxo_A Ezrin-radixin-moesin-bi 98.0 4.8E-06 1.6E-10 70.8 5.3 56 314-377 11-70 (98)
327 2kv8_A RGS12, regulator of G-p 98.0 1.2E-06 4E-11 72.3 1.3 54 313-377 3-60 (83)
328 3sfj_A TAX1-binding protein 3; 98.0 4.7E-06 1.6E-10 71.6 5.1 59 315-377 7-82 (104)
329 1um7_A Synapse-associated prot 98.0 1.3E-06 4.4E-11 76.4 1.4 59 312-377 15-77 (113)
330 2lob_A Golgi-associated PDZ an 97.3 8.1E-07 2.8E-11 78.1 0.0 59 313-377 28-91 (112)
331 2iwq_A Multiple PDZ domain pro 98.0 5.5E-06 1.9E-10 73.9 5.4 61 314-377 26-97 (123)
332 2eei_A PDZ domain-containing p 98.0 2.1E-06 7.3E-11 74.1 2.6 57 313-377 9-69 (106)
333 1r7h_A NRDH-redoxin; thioredox 98.0 2.4E-05 8.1E-10 62.2 8.6 68 502-588 3-73 (75)
334 3kij_A Probable glutathione pe 98.0 8.4E-06 2.9E-10 76.9 6.8 91 497-590 37-171 (180)
335 2jsy_A Probable thiol peroxida 98.0 2.6E-05 8.8E-10 72.2 9.6 89 499-589 45-163 (167)
336 2eeg_A PDZ and LIM domain prot 98.0 2.8E-06 9.6E-11 71.8 2.7 58 312-377 8-69 (94)
337 1uhp_A Hypothetical protein KI 98.0 1.4E-05 4.7E-10 69.2 7.2 50 49-98 54-103 (107)
338 3gyk_A 27KDA outer membrane pr 98.0 1.6E-05 5.4E-10 74.5 8.2 40 497-536 21-60 (175)
339 3b76_A E3 ubiquitin-protein li 98.0 9.7E-06 3.3E-10 71.8 6.3 50 48-97 65-114 (118)
340 1uez_A KIAA1526 protein; PDZ d 98.0 5.2E-06 1.8E-10 71.1 4.4 59 312-377 8-72 (101)
341 2cq9_A GLRX2 protein, glutared 98.0 8.5E-06 2.9E-10 73.2 6.0 87 501-599 29-121 (130)
342 3khf_A Microtubule-associated 98.0 4.5E-06 1.5E-10 71.2 3.9 61 316-377 6-71 (99)
343 2pkt_A PDZ and LIM domain prot 98.0 7.3E-06 2.5E-10 68.7 5.1 57 313-377 4-64 (91)
344 2qbw_A PDZ-fibronectin fusion 97.9 6.8E-06 2.3E-10 78.8 5.2 53 323-377 2-60 (195)
345 3o46_A Maguk P55 subfamily mem 97.9 8.6E-06 2.9E-10 68.6 5.1 48 49-96 41-88 (93)
346 2vz5_A TAX1-binding protein 3; 97.9 7.3E-06 2.5E-10 74.7 5.0 62 312-377 23-101 (139)
347 3cbz_A Dishevelled-2; PDZ doma 97.9 1.7E-05 5.8E-10 68.9 6.9 50 48-97 45-97 (108)
348 3egg_C Spinophilin; PP1, serin 97.9 1.6E-05 5.4E-10 75.1 7.0 47 49-95 124-170 (170)
349 2i81_A 2-Cys peroxiredoxin; st 97.9 3.4E-05 1.1E-09 75.3 9.6 89 498-589 52-176 (213)
350 1kwa_A Hcask/LIN-2 protein; PD 97.9 1.3E-05 4.6E-10 66.9 5.8 46 51-96 40-85 (88)
351 2yuy_A RHO GTPase activating p 97.9 2.5E-06 8.4E-11 76.4 1.1 63 315-378 11-99 (126)
352 2iwo_A Multiple PDZ domain pro 97.9 1.5E-05 5.3E-10 70.6 6.3 49 49-97 66-114 (120)
353 1wg6_A Hypothetical protein (r 97.9 1.3E-05 4.3E-10 71.9 5.7 47 51-97 70-123 (127)
354 2eeh_A PDZ domain-containing p 97.9 1E-05 3.5E-10 69.1 4.8 59 312-377 10-73 (100)
355 1qau_A Neuronal nitric oxide s 97.9 1.5E-05 5.2E-10 69.4 5.7 58 313-377 2-64 (112)
356 3ztl_A Thioredoxin peroxidase; 97.9 5.5E-05 1.9E-09 74.1 10.4 92 498-592 69-197 (222)
357 2kjd_A Sodium/hydrogen exchang 97.9 1.4E-05 4.7E-10 71.4 5.5 58 312-377 9-70 (128)
358 1uit_A Human discs large 5 pro 97.8 1.2E-05 4.1E-10 70.8 4.9 57 312-377 19-79 (117)
359 1ufx_A KIAA1526 protein; PDZ d 97.8 1.8E-05 6.3E-10 68.2 5.9 50 48-97 44-98 (103)
360 2f8a_A Glutathione peroxidase 97.8 1.6E-05 5.4E-10 77.4 6.0 42 497-538 46-89 (208)
361 1ujv_A Membrane associated gua 97.8 1.6E-05 5.5E-10 67.6 5.3 56 311-378 9-68 (96)
362 4a8c_A Periplasmic PH-dependen 97.8 3E-05 1E-09 84.1 8.7 92 1-96 283-420 (436)
363 2vsv_A Rhophilin-2; scaffold p 97.8 1E-05 3.5E-10 70.6 4.1 54 313-377 24-81 (109)
364 1ujd_A KIAA0559 protein; PDZ d 97.8 3.1E-05 1.1E-09 68.2 7.2 49 49-97 62-110 (117)
365 1i16_A Interleukin 16, LCF; cy 97.8 1.3E-05 4.5E-10 72.1 4.8 46 52-97 73-119 (130)
366 2d92_A INAD-like protein; PDZ 97.8 2.5E-05 8.6E-10 67.7 6.5 48 49-96 57-105 (108)
367 1wf8_A Neurabin-I; PDZ domain, 97.8 3.4E-05 1.2E-09 66.7 7.3 51 48-98 52-102 (107)
368 2byg_A Channel associated prot 97.8 3.2E-05 1.1E-09 68.2 7.1 48 49-96 67-114 (117)
369 1eej_A Thiol:disulfide interch 97.8 1.2E-05 4.1E-10 78.6 4.7 80 497-590 85-208 (216)
370 2qkv_A Inactivation-NO-after-p 97.8 2.7E-05 9.1E-10 66.0 6.3 47 51-97 46-92 (96)
371 2dc2_A GOPC, golgi associated 97.8 2.4E-05 8.3E-10 67.2 6.1 45 53-97 52-96 (103)
372 1xvq_A Thiol peroxidase; thior 97.8 4.6E-05 1.6E-09 71.6 8.2 72 498-570 44-147 (175)
373 1qav_A Alpha-1 syntrophin (res 97.8 3.2E-05 1.1E-09 64.5 6.3 45 51-95 45-89 (90)
374 4amh_A Disks large homolog 1; 97.8 4.1E-05 1.4E-09 66.2 7.1 50 48-97 44-93 (106)
375 3shw_A Tight junction protein 97.8 1.4E-05 4.9E-10 86.9 5.1 54 314-377 3-60 (468)
376 2ht9_A Glutaredoxin-2; thiored 97.8 1.6E-05 5.3E-10 73.2 4.6 86 501-596 51-140 (146)
377 1v6b_A Harmonin isoform A1; st 97.8 2.2E-05 7.7E-10 69.3 5.5 50 48-97 55-108 (118)
378 3c1r_A Glutaredoxin-1; oxidize 97.8 5.3E-06 1.8E-10 73.3 1.4 63 502-568 27-96 (118)
379 2a4v_A Peroxiredoxin DOT5; yea 97.8 4.8E-05 1.6E-09 69.9 7.8 74 500-574 37-139 (159)
380 2d8i_A T-cell lymphoma invasio 97.8 1.4E-05 4.9E-10 70.3 3.9 60 312-377 15-81 (114)
381 2la8_A Inactivation-NO-after-p 97.8 4E-05 1.4E-09 66.4 6.6 48 50-97 39-86 (106)
382 3ngh_A PDZ domain-containing p 97.7 1.8E-05 6.2E-10 68.2 4.2 56 314-377 3-63 (106)
383 1d5g_A Human phosphatase HPTP1 97.7 6.6E-05 2.2E-09 63.3 7.6 48 50-97 47-94 (96)
384 1wi4_A Synip, syntaxin binding 97.7 4.2E-05 1.4E-09 66.5 6.5 49 48-96 53-105 (109)
385 2db5_A INAD-like protein; PDZ 97.7 5E-05 1.7E-09 67.9 7.1 47 51-97 69-116 (128)
386 2yt7_A Amyloid beta A4 precurs 97.7 4.2E-05 1.4E-09 65.5 6.3 45 52-96 53-99 (101)
387 2g5m_B Neurabin-2; spinophilin 97.7 2.3E-05 7.8E-10 68.4 4.7 50 48-97 47-96 (113)
388 2edp_A Fragment, shroom family 97.7 9.2E-06 3.2E-10 69.5 2.1 57 312-375 11-71 (100)
389 1v62_A KIAA1719 protein; struc 97.7 4.9E-05 1.7E-09 67.0 6.8 47 51-97 57-103 (117)
390 1wfg_A Regulating synaptic mem 97.7 5.4E-05 1.9E-09 68.1 7.3 49 49-97 78-128 (131)
391 2qg1_A Multiple PDZ domain pro 97.7 6.8E-05 2.3E-09 62.7 7.4 48 49-96 42-89 (92)
392 2fne_A Multiple PDZ domain pro 97.7 6.6E-05 2.3E-09 66.2 7.5 47 50-96 67-113 (117)
393 1n7e_A AMPA receptor interacti 97.7 9.4E-05 3.2E-09 62.6 8.2 47 51-97 45-91 (97)
394 2z17_A Pleckstrin homology SEC 97.7 4E-05 1.4E-09 65.8 5.7 61 316-377 19-85 (104)
395 2he4_A Na(+)/H(+) exchange reg 97.7 4.1E-05 1.4E-09 63.9 5.4 43 54-96 45-87 (90)
396 2b7k_A SCO1 protein; metalloch 97.7 5.3E-05 1.8E-09 72.8 7.0 91 498-591 41-181 (200)
397 1ujv_A Membrane associated gua 97.7 7.8E-05 2.7E-09 63.2 7.1 46 52-97 45-92 (96)
398 4e34_A Golgi-associated PDZ an 97.7 5.6E-05 1.9E-09 62.5 6.1 42 53-94 45-86 (87)
399 2i1n_A Discs, large homolog 3; 97.7 9.8E-05 3.3E-09 63.1 7.7 49 49-97 47-95 (102)
400 3axa_A Afadin, nectin-3, prote 97.7 8.2E-05 2.8E-09 64.1 7.2 49 49-97 51-99 (106)
401 1b8q_A Protein (neuronal nitri 97.7 2E-05 6.7E-10 70.4 3.3 59 312-377 8-71 (127)
402 1uep_A Membrane associated gua 97.7 5.1E-05 1.7E-09 65.1 5.8 46 52-97 50-97 (103)
403 1x5n_A Harmonin; PDZ domain, u 97.7 5.4E-05 1.9E-09 66.1 6.0 55 316-377 19-78 (114)
404 3hpk_A Protein interacting wit 97.7 7.6E-05 2.6E-09 66.4 7.1 49 49-97 58-106 (125)
405 2vwr_A Ligand of NUMB protein 97.7 9.6E-05 3.3E-09 62.2 7.4 50 48-97 41-90 (95)
406 3pv2_A DEGQ; trypsin fold, PDZ 97.7 5.3E-05 1.8E-09 82.4 7.3 92 1-96 302-443 (451)
407 2krg_A Na(+)/H(+) exchange reg 97.7 2.6E-05 8.8E-10 76.5 4.3 58 312-377 9-70 (216)
408 2dkr_A LIN-7 homolog B; LIN-7B 97.6 6.8E-05 2.3E-09 62.8 6.3 46 51-96 45-90 (93)
409 1xzo_A BSSCO, hypothetical pro 97.6 7.5E-05 2.6E-09 69.2 7.2 88 498-590 33-169 (174)
410 2ejy_A 55 kDa erythrocyte memb 97.6 6.7E-05 2.3E-09 64.0 6.2 47 49-95 49-95 (97)
411 2awx_A Synapse associated prot 97.6 8.8E-05 3E-09 63.8 7.1 49 49-97 46-94 (105)
412 1t3b_A Thiol:disulfide interch 97.6 1.9E-05 6.5E-10 77.0 3.2 82 497-592 85-210 (211)
413 2jik_A Synaptojanin-2 binding 97.6 0.00012 4.1E-09 62.4 7.9 47 51-97 52-98 (101)
414 2gs3_A PHGPX, GPX-4, phospholi 97.6 5.1E-05 1.8E-09 71.8 6.0 41 498-538 49-91 (185)
415 1wha_A KIAA0147 protein, scrib 97.6 8.3E-05 2.8E-09 63.9 6.8 46 52-97 54-99 (105)
416 2ehr_A INAD-like protein; PDZ 97.6 7.2E-05 2.5E-09 65.7 6.5 46 52-97 66-111 (117)
417 1g9o_A NHE-RF; PDZ domain, com 97.6 6.5E-05 2.2E-09 62.7 5.9 43 54-96 44-86 (91)
418 2i04_A Membrane-associated gua 97.6 0.00011 3.7E-09 60.5 7.1 45 50-94 39-85 (85)
419 1whd_A RGS3, regulator of G-pr 97.6 1.2E-05 3.9E-10 68.9 1.1 57 310-377 13-73 (100)
420 1vb7_A PDZ and LIM domain 2; P 97.6 1.3E-05 4.4E-10 67.7 1.4 51 320-377 13-67 (94)
421 2jil_A GRIP1 protein, glutamat 97.6 0.00013 4.5E-09 61.6 7.7 48 50-97 46-93 (97)
422 2kpk_A Membrane-associated gua 97.6 9.3E-05 3.2E-09 66.3 7.0 49 49-97 56-106 (129)
423 2iwq_A Multiple PDZ domain pro 97.6 0.00021 7.3E-09 63.5 9.3 49 49-97 72-120 (123)
424 2edv_A FERM and PDZ domain-con 97.6 8.2E-05 2.8E-09 63.0 6.1 44 53-96 46-89 (96)
425 2o2t_A Multiple PDZ domain pro 97.6 0.00012 4.2E-09 64.1 7.3 47 51-97 64-111 (117)
426 2q9v_A Membrane-associated gua 97.6 6.4E-05 2.2E-09 62.6 5.1 47 49-95 40-88 (90)
427 2fe5_A Presynaptic protein SAP 97.6 0.00012 4.2E-09 61.4 6.9 45 51-95 48-92 (94)
428 1nf3_C PAR-6B; semi-CRIB motif 97.6 0.00011 3.8E-09 65.7 7.0 47 50-96 79-125 (128)
429 2opg_A Multiple PDZ domain pro 97.6 0.00018 6.1E-09 60.9 7.9 49 49-97 43-91 (98)
430 2fcf_A Multiple PDZ domain pro 97.6 0.00015 5.1E-09 61.9 7.4 49 49-97 52-100 (103)
431 1q7x_A PDZ2B domain of PTP-BAS 97.6 9E-05 3.1E-09 64.0 6.0 47 51-97 57-103 (108)
432 2daz_A INAD-like protein; PDZ 97.6 0.0001 3.4E-09 65.5 6.4 47 51-97 66-112 (124)
433 3tsv_A Tight junction protein 97.6 6.6E-05 2.3E-09 66.9 5.2 52 316-377 33-88 (124)
434 1ueq_A Membrane associated gua 97.6 0.00015 5.2E-09 64.3 7.5 48 50-97 58-107 (123)
435 2kv8_A RGS12, regulator of G-p 97.6 0.00012 4.3E-09 59.9 6.4 42 54-95 40-81 (83)
436 1whd_A RGS3, regulator of G-pr 97.6 0.00015 5.1E-09 61.8 7.1 45 54-98 53-97 (100)
437 2f5y_A Regulator of G-protein 97.5 0.00014 4.7E-09 60.8 6.7 44 54-97 41-84 (91)
438 3tsz_A Tight junction protein 97.5 5.2E-05 1.8E-09 81.0 5.0 53 313-375 10-66 (391)
439 2djt_A Unnamed protein product 97.5 0.00017 5.7E-09 61.8 7.3 47 51-97 53-99 (104)
440 2csj_A TJP2 protein; PDZ domai 97.5 8.3E-05 2.8E-09 65.3 5.5 45 53-97 61-105 (117)
441 2edz_A PDZ domain-containing p 97.5 6.3E-05 2.2E-09 65.8 4.7 58 312-377 13-75 (114)
442 2dm8_A INAD-like protein; PDZ 97.5 0.00017 5.8E-09 63.0 7.5 47 51-97 58-104 (116)
443 1ihj_A INAD; intermolecular di 97.5 0.00017 5.9E-09 61.0 7.2 45 51-95 52-96 (98)
444 3ngh_A PDZ domain-containing p 97.5 9.1E-05 3.1E-09 63.7 5.5 42 54-95 43-84 (106)
445 3l4f_D SH3 and multiple ankyri 97.5 0.00013 4.4E-09 65.8 6.6 44 54-97 82-125 (132)
446 2e7k_A Maguk P55 subfamily mem 97.5 0.00015 5.2E-09 60.8 6.5 46 49-95 42-87 (91)
447 1wfv_A Membrane associated gua 97.5 0.00014 4.7E-09 62.1 6.4 47 51-97 51-97 (103)
448 1um1_A KIAA1849 protein, RSGI 97.5 0.00016 5.4E-09 62.7 6.8 48 49-96 49-96 (110)
449 2r4h_A Membrane-associated gua 97.5 0.00018 6.2E-09 62.7 7.2 45 51-95 64-108 (112)
450 2eno_A Synaptojanin-2-binding 97.5 0.00013 4.5E-09 64.3 6.3 47 51-97 62-108 (120)
451 2dlu_A INAD-like protein; PDZ 97.5 0.00011 3.7E-09 63.8 5.7 46 52-97 54-99 (111)
452 3nfk_A Tyrosine-protein phosph 97.5 0.00011 3.8E-09 63.2 5.6 44 51-94 58-106 (107)
453 1wh1_A KIAA1095 protein; PDZ d 97.5 6.1E-05 2.1E-09 67.0 3.9 59 313-375 20-84 (124)
454 1mfg_A ERB-B2 interacting prot 97.5 0.00017 5.8E-09 60.7 6.5 43 54-96 51-93 (95)
455 1n7t_A 99-MER peptide of densi 97.5 0.00018 6.3E-09 61.5 6.7 43 54-96 59-101 (103)
456 1uju_A Scribble; PDZ domain, c 97.5 5.2E-05 1.8E-09 65.9 3.2 48 50-97 58-105 (111)
457 2jre_A C60-1 PDZ domain peptid 97.5 0.00015 5.2E-09 62.5 6.2 48 50-97 58-105 (108)
458 2khp_A Glutaredoxin; thioredox 97.5 7.3E-05 2.5E-09 62.2 3.9 82 501-594 7-91 (92)
459 3rle_A Golgi reassembly-stacki 97.5 0.00019 6.3E-09 69.9 7.4 92 1-96 36-170 (209)
460 1rgw_A ZAsp protein; PDZ, cyph 97.5 0.00017 5.7E-09 59.3 6.0 42 54-95 42-83 (85)
461 3gkn_A Bacterioferritin comigr 97.5 0.00028 9.7E-09 64.7 8.3 89 498-590 35-159 (163)
462 2cs5_A Tyrosine-protein phosph 97.5 7.2E-05 2.5E-09 65.9 4.0 44 53-96 59-106 (119)
463 3qe1_A Sorting nexin-27, G pro 97.4 0.0002 6.9E-09 61.6 6.7 44 54-97 60-103 (107)
464 2q3g_A PDZ and LIM domain prot 97.4 0.00018 6.2E-09 59.7 6.2 43 54-96 44-86 (89)
465 2rcz_A Tight junction protein 97.4 0.00026 9E-09 57.2 7.0 45 51-95 36-80 (81)
466 2pa1_A PDZ and LIM domain prot 97.4 0.00022 7.5E-09 58.9 6.7 43 54-96 43-85 (87)
467 3i4w_A Disks large homolog 4; 97.4 0.00021 7.2E-09 61.1 6.7 47 49-95 48-94 (104)
468 2vsp_A PDZ domain-containing p 97.4 0.00018 6E-09 60.1 6.0 43 54-96 44-86 (91)
469 3r68_A Na(+)/H(+) exchange reg 97.4 0.00019 6.4E-09 60.3 6.2 44 54-97 46-89 (95)
470 2iwn_A Multiple PDZ domain pro 97.4 0.00026 8.8E-09 59.5 7.1 46 51-96 48-93 (97)
471 1m5z_A GRIP, AMPA receptor int 97.4 0.00023 7.9E-09 59.3 6.7 42 54-95 49-90 (91)
472 1y7n_A Amyloid beta A4 precurs 97.4 0.00011 3.7E-09 61.7 4.6 48 316-377 17-68 (90)
473 2uzc_A Human pdlim5, PDZ and L 97.4 0.00023 7.7E-09 58.9 6.5 42 54-95 44-85 (88)
474 2koj_A Partitioning defective 97.4 0.00033 1.1E-08 60.7 7.8 47 51-97 54-102 (111)
475 1wi2_A Riken cDNA 2700099C19; 97.4 0.00026 8.8E-09 60.8 7.0 44 54-98 58-101 (104)
476 3h93_A Thiol:disulfide interch 97.4 0.00025 8.5E-09 67.4 7.5 41 497-537 24-65 (192)
477 1z87_A Alpha-1-syntrophin; pro 97.4 0.00013 4.4E-09 73.5 5.6 45 53-97 120-164 (263)
478 2dmz_A INAD-like protein; PDZ 97.4 0.00021 7.2E-09 63.8 6.4 47 51-97 61-107 (129)
479 1q3o_A Shank1; PDZ, GKAP, pept 97.4 0.00024 8.1E-09 61.5 6.6 44 54-97 62-105 (109)
480 1uew_A Membrane associated gua 97.4 0.00023 7.8E-09 62.1 6.5 45 53-97 60-104 (114)
481 3cyy_A Tight junction protein 97.4 0.00014 4.9E-09 60.6 4.9 52 314-377 4-61 (92)
482 2eaq_A LIM domain only protein 97.4 0.00019 6.7E-09 59.6 5.7 53 314-376 5-64 (90)
483 1y7n_A Amyloid beta A4 precurs 97.4 0.00022 7.4E-09 59.8 5.9 41 54-94 48-88 (90)
484 2klx_A Glutaredoxin; thioredox 97.4 7.7E-05 2.6E-09 61.8 3.1 58 501-566 7-67 (89)
485 2d90_A PDZ domain containing p 97.4 0.00011 3.6E-09 62.9 4.0 44 54-97 47-90 (102)
486 1va8_A Maguk P55 subfamily mem 97.4 0.00026 8.7E-09 61.8 6.6 46 51-96 63-108 (113)
487 3ic4_A Glutaredoxin (GRX-1); s 97.4 7.6E-05 2.6E-09 62.1 3.0 72 502-589 14-91 (92)
488 2edp_A Fragment, shroom family 97.4 0.00022 7.4E-09 60.8 5.8 46 51-97 50-95 (100)
489 1vb7_A PDZ and LIM domain 2; P 97.4 0.00038 1.3E-08 58.5 7.3 44 54-97 47-90 (94)
490 1un2_A DSBA, thiol-disulfide i 97.4 9.1E-05 3.1E-09 71.4 3.8 44 497-540 112-159 (197)
491 3khf_A Microtubule-associated 97.4 0.00031 1E-08 59.6 6.6 43 54-96 51-93 (99)
492 3cyy_A Tight junction protein 97.4 0.00037 1.3E-08 58.0 7.0 46 51-96 38-83 (92)
493 1v58_A Thiol:disulfide interch 97.4 0.00037 1.3E-08 69.2 8.2 84 497-589 96-229 (241)
494 2ego_A General receptor for ph 97.3 0.00031 1.1E-08 59.3 6.4 41 54-94 54-94 (96)
495 1v5l_A PDZ and LIM domain 3; a 97.3 5.1E-05 1.7E-09 65.1 1.5 54 316-377 9-66 (103)
496 2v90_A PDZ domain-containing p 97.3 0.00027 9.4E-09 59.5 6.0 44 54-97 47-90 (96)
497 3rhb_A ATGRXC5, glutaredoxin-C 97.3 5.1E-05 1.7E-09 66.0 1.4 62 502-568 21-87 (113)
498 1wif_A RSGI RUH-020, riken cDN 97.3 0.0002 6.9E-09 64.0 5.2 45 51-95 64-110 (126)
499 1uf1_A KIAA1526 protein; PDZ d 97.3 0.00022 7.6E-09 63.6 5.5 57 314-377 22-83 (128)
500 2pkt_A PDZ and LIM domain prot 97.3 0.00039 1.3E-08 57.9 6.5 44 54-97 44-87 (91)
No 1
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=100.00 E-value=2.5e-34 Score=289.58 Aligned_cols=193 Identities=31% Similarity=0.541 Sum_probs=139.2
Q ss_pred eeccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccChHHHHH--------HHHHHHHhhhccchhHHHHHHH
Q psy12938 406 QVRRGPKGVLKDWEQFKQYECQMRRDKELQRLAQIQKLALTCQSSEEARK--------EAEMEAELKELEDDGFLLEYQK 477 (612)
Q Consensus 406 ~~~~~~~gv~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--------~~e~~~~l~el~Dd~~l~~yr~ 477 (612)
..+|||||||+|||+|| +..+++.....++.+.++++++++.+..++.. .+|.+..-++.+|++||++||+
T Consensus 17 ~~~TGpKGVi~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d~eDe~fL~~~r~ 95 (245)
T 1a0r_P 17 ASHTGPKGVINDWRKFK-LESEDSDSVAHSKKEILRQMSSPQSRDDKDSKERFSRKMSVQEYELIHKDKEDENCLRKYRR 95 (245)
T ss_dssp CCSSHHHHHHHHHHHHH-HHTC------------------------------CCCCSCHHHHHHHTTCCCCHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHH-HHHhhhhhhHHHHHHHHHhccccccCCccccchhhhccCChhhhhhcccccccHHHHHHHHH
Confidence 56999999999999999 55544444455566777888888875532111 1122222224467899999999
Q ss_pred HHHHHHHHH-----------------HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCc
Q psy12938 478 EKMKQMYDR-----------------LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCV 540 (612)
Q Consensus 478 ~R~~el~~~-----------------~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~ 540 (612)
+||+||+.. .|.+.|.+..+..+||||||++||++|+.|.++|..||++|+.++|++|+++..
T Consensus 96 ~Rl~el~~~~~~~~~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~kVd~d~~ 175 (245)
T 1a0r_P 96 QCMQDMHQKLSFGPRYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFCKIKASNT 175 (245)
T ss_dssp HHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEEEEEHHHH
T ss_pred HHHHHHHHHhhccCCCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEEEEeCCcH
Confidence 999999863 477777665567799999999999999999999999999999999999998762
Q ss_pred hhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHHCCcccCCCCCC
Q psy12938 541 GDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEAGLLRAGGLPG 601 (612)
Q Consensus 541 ~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g~l~~~~~~~ 601 (612)
.++.+|.+.++||+++|++|+.+.+++|+...+|.+|+.++|++||.++|+|+++++.-
T Consensus 176 --~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~l~~~~~~~ 234 (245)
T 1a0r_P 176 --GAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGLLPEKEMHV 234 (245)
T ss_dssp --CCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTCSCCC----
T ss_pred --HHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCCCCCcccch
Confidence 57789999999999999999999999999888888999999999999999999888643
No 2
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.98 E-value=7.2e-34 Score=281.87 Aligned_cols=189 Identities=30% Similarity=0.546 Sum_probs=152.7
Q ss_pred eeccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccChHHH--------HHHHHHHHHhhhccchhHHHHHHH
Q psy12938 406 QVRRGPKGVLKDWEQFKQYECQMRRDKELQRLAQIQKLALTCQSSEEA--------RKEAEMEAELKELEDDGFLLEYQK 477 (612)
Q Consensus 406 ~~~~~~~gv~~d~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~--------~~~~e~~~~l~el~Dd~~l~~yr~ 477 (612)
..+|||||||+|||+|+ +..+++.....++...++++++++++..++ ...+|.++.-++.+|++||++||+
T Consensus 4 ~~~tgpkgvi~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d~~d~~fl~~~r~ 82 (217)
T 2trc_P 4 ATHTGPKGVINDWRKFK-LESEDGDSIPPSKKEILRQMSSPQSRDDKDSKERMSRKMSIQEYELIHQDKEDEGCLRKYRR 82 (217)
T ss_dssp CCSSHHHHHHHHHHHHH-HHHTTCSSSTTSCSSCSCSSCCSSSSCCGGGSSCCCCSSCHHHHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHH-HhhhhhhhhhHHHHHHHHHhcccccCCchhhhhhhhccCChhhhhhhccccccHHHHHHHHH
Confidence 46999999999999999 554433333333445567788887654211 011222222224467899999999
Q ss_pred HHHHHHHHH-----------------HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCc
Q psy12938 478 EKMKQMYDR-----------------LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCV 540 (612)
Q Consensus 478 ~R~~el~~~-----------------~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~ 540 (612)
+||+||+.. .|.+.|.+..++.+||||||++||++|+.|.++|..||++|+.++|++|+++ .
T Consensus 83 ~Rl~el~~~~~~~~~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~~vd~~-~ 161 (217)
T 2trc_P 83 QCMQDMHQKLSFGPRYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFCKIRAS-N 161 (217)
T ss_dssp HHHHHHHHHHCCCCCCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEEEEEHH-H
T ss_pred HHHHHHHHHHHhccCCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEEECC-c
Confidence 999999863 4777777655567999999999999999999999999999999999999998 4
Q ss_pred hhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHHCCcccCC
Q psy12938 541 GDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEAGLLRAG 597 (612)
Q Consensus 541 ~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g~l~~~ 597 (612)
+ .++.+|.+.++||+++|++|+.+.+++|+...+|.+|+.++|++||.++|+|+++
T Consensus 162 ~-~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g~l~~k 217 (217)
T 2trc_P 162 T-GAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYGLLPER 217 (217)
T ss_dssp H-TCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTTCSCCC
T ss_pred H-HHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHcCCCCCC
Confidence 4 6778999999999999999999999999999999999999999999999999764
No 3
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.91 E-value=2.3e-24 Score=193.12 Aligned_cols=109 Identities=25% Similarity=0.464 Sum_probs=100.0
Q ss_pred HHHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 485 DRLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 485 ~~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
.++|.++|.+.+++.+||||||++||++|+.|+++|++||++|++++|++||++.. +++|.++++|||++||||+.
T Consensus 10 ~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd~d~~----~~~~~v~~~PT~~~fk~G~~ 85 (118)
T 3evi_A 10 GNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAIVNSC----IQHYHDNCLPTIFVYKNGQI 85 (118)
T ss_dssp GGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEEGGGT----STTCCGGGCSEEEEEETTEE
T ss_pred HHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEEhHHh----HHHCCCCCCCEEEEEECCEE
Confidence 34677888776556799999999999999999999999999999999999999854 48999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHHCCcccCC
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVEAGLLRAG 597 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~~g~l~~~ 597 (612)
+++++|+.+++|++|+.++||++|.++|+|+.+
T Consensus 86 v~~~~G~~~~gg~~~~~~~le~~L~~~g~i~~~ 118 (118)
T 3evi_A 86 EAKFIGIIECGGINLKLEELEWKLAEVGAIQTD 118 (118)
T ss_dssp EEEEESTTTTTCSSCCHHHHHHHHHTTTSCCCC
T ss_pred EEEEeChhhhCCCCCCHHHHHHHHHHcCCcCCC
Confidence 999999999999999999999999999999753
No 4
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=2.5e-18 Score=156.98 Aligned_cols=109 Identities=25% Similarity=0.480 Sum_probs=98.0
Q ss_pred HHHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 485 DRLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 485 ~~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
..+|.+.|.+..++.+|||+||++||++|+.|.+.|++||++|++++|++|+++... .+|.+.++||+++|++|+.
T Consensus 17 ~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~~vd~~~~~----~~~~i~~~Pt~~~~~~G~~ 92 (135)
T 2dbc_A 17 GNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFVKAIVNSCI----EHYHDNCLPTIFVYKNGQI 92 (135)
T ss_dssp HHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEEEECCSSSC----SSCCSSCCSEEEEESSSSC
T ss_pred HHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEEEEEhhcCc----ccCCCCCCCEEEEEECCEE
Confidence 345777777655557999999999999999999999999999999999999998653 7899999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHHCCcccCC
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVEAGLLRAG 597 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~~g~l~~~ 597 (612)
+.+++|+.+.+|.+++.++|+++|.++|+|+.+
T Consensus 93 v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~ 125 (135)
T 2dbc_A 93 EGKFIGIIECGGINLKLEELEWKLSEVGAIQSD 125 (135)
T ss_dssp SEEEESTTTTTCTTCCHHHHHHHHHHHTSSCCC
T ss_pred EEEEEeEEeeCCCcCCHHHHHHHHHHcCCcccc
Confidence 999999988888889999999999999998754
No 5
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.74 E-value=1.5e-17 Score=145.42 Aligned_cols=95 Identities=15% Similarity=0.282 Sum_probs=83.1
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
+|.+.+.+. ++.+|||+|||+||++|+.|.+.|+++|+.|+++.|++||++..+ .++.+|.+.++||+++|++|+.++
T Consensus 10 ~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~d~~~-~l~~~~~V~~~PT~~~~~~G~~v~ 87 (105)
T 3zzx_A 10 DFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDECE-DIAQDNQIACMPTFLFMKNGQKLD 87 (105)
T ss_dssp HHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEETTTCH-HHHHHTTCCBSSEEEEEETTEEEE
T ss_pred HHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEEEecccCH-HHHHHcCCCeecEEEEEECCEEEE
Confidence 344445432 456899999999999999999999999999999999999999887 789999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHHC
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+++|. +.++|+.+|.+|
T Consensus 88 ~~~G~--------~~~~l~~~i~k~ 104 (105)
T 3zzx_A 88 SLSGA--------NYDKLLELVEKN 104 (105)
T ss_dssp EEESC--------CHHHHHHHHHHH
T ss_pred EEeCc--------CHHHHHHHHHhc
Confidence 99874 347899999876
No 6
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.73 E-value=8.1e-18 Score=156.15 Aligned_cols=95 Identities=11% Similarity=0.096 Sum_probs=78.6
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEe
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVV 565 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~ 565 (612)
+|.++|.++ .+.+|||+|||+||++|++|+|+|++||++|++ ++|++||+|+.+ +++.+|.++.+|||++||+|+.+
T Consensus 31 ~f~~~v~~~-~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~-e~a~~y~V~siPT~~fFk~G~~v 108 (160)
T 2av4_A 31 AVDQAIVNE-DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVP-DFNTMYELYDPVSVMFFYRNKHM 108 (160)
T ss_dssp HHHHHHHHC-SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC-TTTTTTTCCSSEEEEEEETTEEE
T ss_pred HHHHHHHhc-CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCH-HHHHHcCCCCCCEEEEEECCEEE
Confidence 455566432 355899999999999999999999999999975 999999999987 88899999999999999999998
Q ss_pred --e-------EEEeccccccCCCCHHHHHHHHH
Q psy12938 566 --G-------NFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 566 --~-------~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
+ +++|+.. ..++|+.+|.
T Consensus 109 ~vd~Gtgd~~k~vGa~~------~k~~l~~~ie 135 (160)
T 2av4_A 109 MIDLGTGNNNKINWPMN------NKQEFIDIVE 135 (160)
T ss_dssp EEECSSSCCSCBCSCCC------CHHHHHHHHH
T ss_pred EEecCCCCcCeEEeecC------CHHHHHHHHH
Confidence 5 7777633 1255666654
No 7
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.71 E-value=3.2e-17 Score=149.54 Aligned_cols=95 Identities=14% Similarity=0.129 Sum_probs=83.0
Q ss_pred HHHHhhccCCCCceEEEEEeCCCC--hhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCE
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSL--PACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGE 563 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~--~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~ 563 (612)
.|.+.|.+ ...+|+|+||++|| ++|++|.|+|++||++|. .++|+|||+|..+ .++.+|.++++|||++||||+
T Consensus 24 ~F~~~v~~--~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~-~la~~ygV~siPTlilFkdG~ 100 (137)
T 2qsi_A 24 TVDDFIAH--SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAER-GLMARFGVAVCPSLAVVQPER 100 (137)
T ss_dssp THHHHHHT--SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHH-HHHHHHTCCSSSEEEEEECCE
T ss_pred HHHHHHhc--CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCH-HHHHHcCCccCCEEEEEECCE
Confidence 45556643 33489999999999 999999999999999995 6999999999887 899999999999999999999
Q ss_pred EeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 564 VVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 564 ~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+++++|+... ++|+.+|.++
T Consensus 101 ~v~~~vG~~~k-------~~l~~~l~~~ 121 (137)
T 2qsi_A 101 TLGVIAKIQDW-------SSYLAQIGAM 121 (137)
T ss_dssp EEEEEESCCCH-------HHHHHHHHHH
T ss_pred EEEEEeCCCCH-------HHHHHHHHHH
Confidence 99999999766 6777777643
No 8
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.69 E-value=1.3e-17 Score=152.80 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhccCCCCceEEEEEeCCC--ChhhhhhHHHHHHHHhhcC-C-ceEEEecCCCchhchhhhCCCCCCcEE
Q psy12938 481 KQMYDRLFLSEIDSEPRHITVIAHLSSPS--LPACRALNSSLAELSRSHT-N-VKFVSVPLGCVGDHFSATFKTSGLPAM 556 (612)
Q Consensus 481 ~el~~~~~~~~V~~~~~~~~Vvvhfy~~~--~~~C~~m~~~l~~LA~~~~-~-vkF~ki~~~~~~d~~~~~~~i~~lPtl 556 (612)
.++....|.+.|. ...+|+|.||++| |++|++|.|+|++||++|+ . ++|+|||+|..+ .++.+|.|+++|||
T Consensus 20 ~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~-~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 20 TPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE-AIGDRFGAFRFPAT 95 (140)
T ss_dssp EECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHH-HHHHHHTCCSSSEE
T ss_pred ccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCH-HHHHHcCCccCCEE
Confidence 3444556766674 2346889999999 9999999999999999996 5 999999999887 89999999999999
Q ss_pred EEEECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 557 LAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 557 lvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
++||||+.+++++|+... ++|+.+|.++
T Consensus 96 ilFk~G~~v~~~~G~~~k-------~~l~~~i~~~ 123 (140)
T 2qgv_A 96 LVFTGGNYRGVLNGIHPW-------AELINLMRGL 123 (140)
T ss_dssp EEEETTEEEEEEESCCCH-------HHHHHHHHHH
T ss_pred EEEECCEEEEEEecCCCH-------HHHHHHHHHH
Confidence 999999999999998666 7788887654
No 9
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.65 E-value=3e-16 Score=149.11 Aligned_cols=136 Identities=60% Similarity=0.901 Sum_probs=117.4
Q ss_pred cccCCCccccccCCCCccccccCCCCCCCCcccCCcccccccCcccccccCCCCcccccccCCCccccCCCCCCcccccc
Q psy12938 181 YYEDGNFWMEVEGLPDRDLELADNSDEGDVPVKSNTKVKFSMAPIKCTYSESLKPVLGHMVGSNATLDSYSGHSTTLEDS 260 (612)
Q Consensus 181 ~~~~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 260 (612)
.|++++.+.+++|++..+. .+...+++|+.+|+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~s~~~~~---------------------------------- 44 (170)
T 3egg_C 11 PYEPESGCVEIPGLSEEED------------PAPSRKIHFSTAPIQ---------------------------------- 44 (170)
T ss_dssp CCCCCCCEEEECCCCCCSS------------CCTTCCCEECCSCEE----------------------------------
T ss_pred ccCCCCcceecCCCCcccc------------CCCCceEecCCCccc----------------------------------
Confidence 4777889999999997653 233557777777776
Q ss_pred ccccCCCCCcccCCccccccccccccccCCCCCCccchhhHHHHhhhccceeEEEEEEeeCCCCcceEEEeccCCCCCCC
Q psy12938 261 YARDLGSTNTLEDSKYVYSTFSMNEYDRRNEDVDPVAASAEYELEKRVEKLTLLGVELMKGAEGLGLSIIGMGVGADAGL 340 (612)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~v~l~k~~~glG~si~g~~~g~~~~~ 340 (612)
++.+++.++|.+.+.+.||+..++.|..++.....++++|.|.|+..||||+|.|++.+.+...
T Consensus 45 ----------------v~~~~s~~~y~~~~~~ldp~~~~~~~~~e~~~~~~~~~~v~l~k~~~glG~~i~g~~~g~~~~~ 108 (170)
T 3egg_C 45 ----------------VFSTYSNEDYDRRNEDVDPMAASAEYELEKRVERLELFPVELEKDSEGLGISIIGMGAGADMGL 108 (170)
T ss_dssp ----------------EEEECCTTTSCCCCTTCCHHHHHHHHHHHHHHTTSEEEEEEEECBTTBSSEEEEEECSSSSCCS
T ss_pred ----------------ccccCChhHhcccccCCCcccchhhcccccccCCceEEEEEEEeCCCeEeEEEEecccCCcccc
Confidence 6777788899999999999999899999999999999999999999999999999666666655
Q ss_pred CccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 341 EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 341 ~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+.||||.+|.+||+|+++|+|++|| |||.++.+++|.
T Consensus 109 ~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~ 150 (170)
T 3egg_C 109 EKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQS 150 (170)
T ss_dssp SSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHH
T ss_pred CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 67899999999999999999999999 999999998773
No 10
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.61 E-value=1e-15 Score=132.52 Aligned_cols=87 Identities=11% Similarity=0.166 Sum_probs=71.0
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
.+.+|+|+||++||++|+.|.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~--- 92 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQ-EIAGRYAVFTGPTVLLFYNGKEILRESRFIS--- 92 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC----------CCCCEEEEEETTEEEEEEESSCC---
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCH-HHHHhcCCCCCCEEEEEeCCeEEEEEeCCcC---
Confidence 456899999999999999999999999999999999999999776 7889999999999999999999999988744
Q ss_pred CCCCHHHHHHHHHHC
Q psy12938 577 EGYFVEDVEAFLVEA 591 (612)
Q Consensus 577 ~~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.++
T Consensus 93 ----~~~l~~~l~~~ 103 (105)
T 4euy_A 93 ----LENLERTIQLF 103 (105)
T ss_dssp ----HHHHHHHHHTT
T ss_pred ----HHHHHHHHHHh
Confidence 48899888753
No 11
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.60 E-value=2.9e-14 Score=164.51 Aligned_cols=97 Identities=29% Similarity=0.437 Sum_probs=80.8
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcCCCeEEEEEeecCCCCc------------h--------------------hhH
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDPVN------------S--------------------EVA 48 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~~~~v~l~v~r~~~~~~------------~--------------------~i~ 48 (612)
+||+|++|||+++.+++|.+++.+|+.++..|.|+|.|...... . .|.
T Consensus 110 ~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~ 189 (721)
T 2xkx_A 110 VNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVT 189 (721)
T ss_pred CCCEEEEECCEECCCCCHHHHHHHhhccccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEE
Confidence 59999999999999999999999999999999999988642210 0 011
Q ss_pred Hh-------hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QL-------IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i-------~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.+ ..|+|++||+|++|||+++.+++|.+++.+|+.++..|.|+|.|...
T Consensus 190 ~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~V~R~g~ 245 (721)
T 2xkx_A 190 KIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 245 (721)
T ss_pred EeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 11 23459999999999999999999999999999999999999988543
No 12
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.55 E-value=2.3e-14 Score=124.15 Aligned_cols=85 Identities=12% Similarity=0.180 Sum_probs=75.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
++.+++|+||++||++|+.+.+.|++++++|++++|++++.+..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~---- 94 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQ-GTAATNNISATPTFQFFRNKVRIDQYQGAD---- 94 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH-HHHHHTTCCSSSEEEEEETTEEEEEEESSC----
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEEEEECccCH-HHHHhcCCCcccEEEEEECCeEEEEEeCCC----
Confidence 355899999999999999999999999999999999999999776 788999999999999999999999888752
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 95 ----~~~l~~~l~~ 104 (107)
T 1gh2_A 95 ----AVGLEEKIKQ 104 (107)
T ss_dssp ----HHHHHHHHHH
T ss_pred ----HHHHHHHHHH
Confidence 2458888765
No 13
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.54 E-value=1.2e-14 Score=128.60 Aligned_cols=84 Identities=20% Similarity=0.326 Sum_probs=76.8
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+|+|+||++||++|+.+.+.|++|+++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~---- 104 (116)
T 3qfa_C 31 DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQ-DVASECEVKSMPTFQFFKKGQKVGEFSGA-N---- 104 (116)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTTTH-HHHHHTTCCSSSEEEEESSSSEEEEEESC-C----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHcCCccccEEEEEeCCeEEEEEcCC-C----
Confidence 45899999999999999999999999999999999999999876 78899999999999999999999988876 3
Q ss_pred CCCHHHHHHHHHH
Q psy12938 578 GYFVEDVEAFLVE 590 (612)
Q Consensus 578 ~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 105 ---~~~l~~~l~~ 114 (116)
T 3qfa_C 105 ---KEKLEATINE 114 (116)
T ss_dssp ---HHHHHHHHHH
T ss_pred ---HHHHHHHHHH
Confidence 4889888875
No 14
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.54 E-value=4.5e-14 Score=123.27 Aligned_cols=85 Identities=13% Similarity=0.295 Sum_probs=77.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
..+|+|+||++||++|+.|.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 24 ~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~------ 96 (109)
T 3f3q_A 24 DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELG-DVAQKNEVSAMPTLLLFKNGKEVAKVVGA------ 96 (109)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESS------
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHcCCCccCEEEEEECCEEEEEEeCC------
Confidence 55899999999999999999999999999999999999999876 78899999999999999999999998876
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
..+.|+.+|.++
T Consensus 97 --~~~~l~~~i~~~ 108 (109)
T 3f3q_A 97 --NPAAIKQAIAAN 108 (109)
T ss_dssp --CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHhh
Confidence 237888888753
No 15
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.54 E-value=2.9e-14 Score=130.01 Aligned_cols=94 Identities=22% Similarity=0.385 Sum_probs=75.8
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
+.|...+.+ ... +||+||++||+.|+.+.+.|+.++++|+ +++|++|+.+..+ .+..+|.+.++||+++|++|+.
T Consensus 41 ~~~~~~~~~--~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~ 116 (140)
T 1v98_A 41 KGFAQEVAG--APL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHP-GLAARYGVRSVPTLVLFRRGAP 116 (140)
T ss_dssp --------C--CCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHHHHHc--CCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCH-HHHHHCCCCccCEEEEEeCCcE
Confidence 345555543 233 9999999999999999999999999997 6999999999775 7889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++.|... .++|+.+|.+
T Consensus 117 ~~~~~G~~~-------~~~l~~~i~~ 135 (140)
T 1v98_A 117 VATWVGASP-------RRVLEERLRP 135 (140)
T ss_dssp EEEEESCCC-------HHHHHHHHHH
T ss_pred EEEEeCCCC-------HHHHHHHHHH
Confidence 999988643 4788888865
No 16
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.53 E-value=4.5e-14 Score=122.52 Aligned_cols=96 Identities=20% Similarity=0.306 Sum_probs=81.9
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
+.|.+.+.+ ...+++|+||++||++|+.+.+.|++++++|++ ++|++++.+..+ .+..+|.+.++||+++|++|+.
T Consensus 12 ~~~~~~~~~--~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~ 88 (111)
T 3gnj_A 12 NTFEQLIYD--EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEK-TLFQRFSLKGVPQILYFKDGEY 88 (111)
T ss_dssp HHHHHHHTT--SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH-HHHHHTTCCSSCEEEEEETTEE
T ss_pred HHHHHHHHh--cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcCh-hHHHhcCCCcCCEEEEEECCEE
Confidence 345555633 345899999999999999999999999999984 999999999876 7889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+.++.|... .++|+.+|.++
T Consensus 89 ~~~~~g~~~-------~~~l~~~l~~~ 108 (111)
T 3gnj_A 89 KGKMAGDVE-------DDEVEQMIADV 108 (111)
T ss_dssp EEEEESSCC-------HHHHHHHHHHH
T ss_pred EEEEeccCC-------HHHHHHHHHHH
Confidence 999988643 48888888753
No 17
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.52 E-value=5.9e-14 Score=130.20 Aligned_cols=95 Identities=16% Similarity=0.267 Sum_probs=79.6
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEe-
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVV- 565 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~- 565 (612)
|.+.+.. ....+|+|+||++||++|+.|.+.|++++++|++ ++|++|+.+..+ .++.+|.+.++||+++|++|+.+
T Consensus 14 ~~~~i~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~v~ 91 (149)
T 3gix_A 14 VDQAIKS-TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTA-VYTQYFDISYIPSTVFFFNGQHMK 91 (149)
T ss_dssp HHHHHHH-CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCC-HHHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCH-HHHHHcCCCccCeEEEEECCeEEE
Confidence 4444431 1456899999999999999999999999999987 999999999876 78899999999999999999999
Q ss_pred --------eEEEe-ccccccCCCCHHHHHHHHHHC
Q psy12938 566 --------GNFVR-LGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 566 --------~~~vg-~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+++| +... ++|+.+|.+.
T Consensus 92 ~~~g~~~~~~~~G~~~~~-------~~l~~~l~~~ 119 (149)
T 3gix_A 92 VDYGSPDHTKFVGSFKTK-------QDFIDLIEVI 119 (149)
T ss_dssp EECSSSCCSCEESCCSSH-------HHHHHHHHHH
T ss_pred eecCCCCCCeEeeecCCH-------HHHHHHHHHH
Confidence 88888 5433 6777776644
No 18
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.52 E-value=6.9e-14 Score=120.11 Aligned_cols=85 Identities=21% Similarity=0.355 Sum_probs=77.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
++.+++|+||++||+.|+.+.+.|++++++|+++.|++++.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 19 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~--- 93 (105)
T 3m9j_A 19 GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQ-DVASESEVKSMPTFQFFKKGQKVGEFSGA-N--- 93 (105)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEEEEETTTCH-HHHHHTTCCBSSEEEEEETTEEEEEEESS-C---
T ss_pred CCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEEEEEhhhhH-HHHHHcCCCcCcEEEEEECCeEEEEEeCC-C---
Confidence 355899999999999999999999999999999999999999876 78899999999999999999999998876 3
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 94 ----~~~l~~~l~~ 103 (105)
T 3m9j_A 94 ----KEKLEATINE 103 (105)
T ss_dssp ----HHHHHHHHHH
T ss_pred ----HHHHHHHHHH
Confidence 3888888875
No 19
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.51 E-value=4.1e-14 Score=123.76 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=77.9
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
...++|+||++||++|+.+.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|+...
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~--- 94 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAISSVDSEARP-ELMKELGFERVPTLVFIRDGKVAKVFSGIMNP--- 94 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEEEEEGGGCH-HHHHHTTCCSSCEEEEEESSSEEEEEESCCCH---
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEEEEcCcCCH-HHHHHcCCcccCEEEEEECCEEEEEEcCCCCH---
Confidence 34799999999999999999999999999999999999998765 78899999999999999999999999987444
Q ss_pred CCCHHHHHHHHHHCC
Q psy12938 578 GYFVEDVEAFLVEAG 592 (612)
Q Consensus 578 ~~~~~~lE~~L~~~g 592 (612)
++|+.+|.+++
T Consensus 95 ----~~l~~~~~~~~ 105 (110)
T 2l6c_A 95 ----RELQALYASIH 105 (110)
T ss_dssp ----HHHHHHHHTC-
T ss_pred ----HHHHHHHHHHh
Confidence 88999987653
No 20
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.51 E-value=7.8e-14 Score=123.04 Aligned_cols=84 Identities=12% Similarity=0.311 Sum_probs=76.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+++|.||++||+.|+.+.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~----- 103 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESP-DIAKECEVTAMPTFVLGKDGQLIGKIIGAN----- 103 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSBSEEEEEETTEEEEEEESSC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHCCCCcccEEEEEeCCeEEEEEeCCC-----
Confidence 34899999999999999999999999999999999999999775 788999999999999999999999998863
Q ss_pred CCCHHHHHHHHHH
Q psy12938 578 GYFVEDVEAFLVE 590 (612)
Q Consensus 578 ~~~~~~lE~~L~~ 590 (612)
.+.|+.+|.+
T Consensus 104 ---~~~l~~~l~~ 113 (114)
T 2oe3_A 104 ---PTALEKGIKD 113 (114)
T ss_dssp ---HHHHHHHHHT
T ss_pred ---HHHHHHHHHh
Confidence 3788888864
No 21
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.50 E-value=9.3e-14 Score=121.16 Aligned_cols=95 Identities=16% Similarity=0.294 Sum_probs=76.7
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhh--cCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRS--HTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~--~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
+|.+.+.+.....+++|+||++||++|+.+.+.|++++++ +++++|++++.+..+ .+..+|.+.++||+++|++|+.
T Consensus 10 ~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~ 88 (112)
T 3d6i_A 10 QFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENS-EISELFEISAVPYFIIIHKGTI 88 (112)
T ss_dssp HHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEE
T ss_pred HHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCH-HHHHHcCCCcccEEEEEECCEE
Confidence 3444454323456899999999999999999999999999 788999999999776 7889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++.|.. .++|+.+|.+
T Consensus 89 ~~~~~G~~--------~~~l~~~l~~ 106 (112)
T 3d6i_A 89 LKELSGAD--------PKEYVSLLED 106 (112)
T ss_dssp EEEECSCC--------HHHHHHHHHH
T ss_pred EEEecCCC--------HHHHHHHHHH
Confidence 99888762 2457777654
No 22
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.49 E-value=1.5e-13 Score=128.32 Aligned_cols=86 Identities=10% Similarity=0.300 Sum_probs=77.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
.+.+|||+||++||++|+.+.+.|++++++|+ .++|++||.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~-~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~-- 139 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHP-AVAGRHRIQGIPAFILFHKGRELARAAGARP-- 139 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTST-HHHHHTTCCSSSEEEEEETTEEEEEEESCCC--
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccH-HHHHHcCCCcCCEEEEEeCCeEEEEecCCCC--
Confidence 45589999999999999999999999999996 7999999999776 7889999999999999999999999988643
Q ss_pred cCCCCHHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLVE 590 (612)
Q Consensus 576 g~~~~~~~lE~~L~~ 590 (612)
.++|+.||.+
T Consensus 140 -----~~~l~~~l~~ 149 (155)
T 2ppt_A 140 -----ASELVGFVRG 149 (155)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHH
Confidence 4889988876
No 23
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.49 E-value=1.4e-13 Score=123.65 Aligned_cols=85 Identities=15% Similarity=0.300 Sum_probs=75.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
...+++|+||++||++|+.+.+.|++|+++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~i~~~G~~~~~~~G~----- 109 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNS-EIVSKCRVLQLPTFIIARSGKMLGHVIGA----- 109 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESS-----
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHcCCCcccEEEEEeCCeEEEEEeCC-----
Confidence 345899999999999999999999999999999999999999776 78899999999999999999999988774
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
+.++|+.+|.+
T Consensus 110 ---~~~~l~~~l~~ 120 (125)
T 1r26_A 110 ---NPGMLRQKLRD 120 (125)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
Confidence 23678777764
No 24
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.48 E-value=2.1e-13 Score=117.08 Aligned_cols=86 Identities=13% Similarity=0.291 Sum_probs=77.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
+..+++|+||++||+.|+.+.+.|++++++|++ ++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~-- 94 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENP-STAAKYEVMSIPTLIVFKDGQPVDKVVGFQP-- 94 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSBSEEEEEETTEEEEEEESCCC--
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCH-HHHHhCCCcccCEEEEEeCCeEEEEEeCCCC--
Confidence 345899999999999999999999999999986 999999999876 7889999999999999999999999888644
Q ss_pred cCCCCHHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLVE 590 (612)
Q Consensus 576 g~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 95 -----~~~l~~~l~~ 104 (106)
T 3die_A 95 -----KENLAEVLDK 104 (106)
T ss_dssp -----HHHHHHHHHT
T ss_pred -----HHHHHHHHHH
Confidence 3889888865
No 25
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.48 E-value=1.5e-13 Score=123.05 Aligned_cols=85 Identities=14% Similarity=0.340 Sum_probs=76.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
..+++|+||++||++|+.+.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|+
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~------ 110 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELK-SVASDWAIQAMPTFMFLKEGKILDKVVGA------ 110 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEEEEETTTSH-HHHHHTTCCSSSEEEEEETTEEEEEEESC------
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECccCH-HHHHHcCCCccCEEEEEECCEEEEEEeCC------
Confidence 45899999999999999999999999999999999999999776 78899999999999999999999988774
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
+.++|+.+|.++
T Consensus 111 --~~~~l~~~l~~~ 122 (124)
T 1xfl_A 111 --KKDELQSTIAKH 122 (124)
T ss_dssp --CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHh
Confidence 247788888653
No 26
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.47 E-value=3e-13 Score=118.25 Aligned_cols=84 Identities=15% Similarity=0.301 Sum_probs=76.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+++|+||++||+.|+.+.+.|++++++|+++.|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 26 ~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~---- 99 (112)
T 1syr_A 26 NELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVS-EVTEKENITSMPTFKVYKNGSSVDTLLGA-N---- 99 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTTH-HHHHHTTCCSSSEEEEEETTEEEEEEESC-C----
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEEEEECCCCH-HHHHHcCCCcccEEEEEECCcEEEEEeCC-C----
Confidence 44899999999999999999999999999999999999999775 68899999999999999999999988776 3
Q ss_pred CCCHHHHHHHHHH
Q psy12938 578 GYFVEDVEAFLVE 590 (612)
Q Consensus 578 ~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 100 ---~~~l~~~l~~ 109 (112)
T 1syr_A 100 ---DSALKQLIEK 109 (112)
T ss_dssp ---HHHHHHHHHT
T ss_pred ---HHHHHHHHHH
Confidence 3888888865
No 27
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.47 E-value=2.2e-13 Score=119.22 Aligned_cols=93 Identities=19% Similarity=0.313 Sum_probs=80.4
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEe
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVV 565 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~ 565 (612)
.|.+.+ .+.+++|+||++||++|+.+.+.|.+++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+
T Consensus 10 ~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~ 84 (112)
T 2voc_A 10 SFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQ-ETAGKYGVMSIPTLLVLKDGEVV 84 (112)
T ss_dssp THHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCC-SHHHHTTCCSBSEEEEEETTEEE
T ss_pred HHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCH-HHHHHcCCCcccEEEEEeCCEEE
Confidence 344455 34589999999999999999999999999996 6999999999775 78899999999999999999999
Q ss_pred eEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 566 GNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 566 ~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.++.|.... ++|+.+|.++
T Consensus 85 ~~~~G~~~~-------~~l~~~l~~~ 103 (112)
T 2voc_A 85 ETSVGFKPK-------EALQELVNKH 103 (112)
T ss_dssp EEEESCCCH-------HHHHHHHHTT
T ss_pred EEEeCCCCH-------HHHHHHHHHH
Confidence 999887444 8899998754
No 28
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.47 E-value=2.1e-13 Score=120.76 Aligned_cols=85 Identities=19% Similarity=0.320 Sum_probs=76.6
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+++|+||++||+.|+.+.+.|++++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 34 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~----- 107 (122)
T 2vlu_A 34 KKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELK-PIAEQFSVEAMPTFLFMKEGDVKDRVVGAI----- 107 (122)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESSC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEEEEECCCCH-HHHHHcCCCcccEEEEEeCCEEEEEEeCcC-----
Confidence 44799999999999999999999999999999999999999776 788999999999999999999999888763
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.++
T Consensus 108 ---~~~l~~~l~~~ 118 (122)
T 2vlu_A 108 ---KEELTAKVGLH 118 (122)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHH
Confidence 37888888753
No 29
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.47 E-value=3.8e-13 Score=116.15 Aligned_cols=93 Identities=14% Similarity=0.265 Sum_probs=79.3
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|...+.+ .+.+++|+||++||+.|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 12 f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~ 88 (108)
T 2trx_A 12 FDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAPKYGIRGIPTLLLFKNGEVAA 88 (108)
T ss_dssp HHHHTTT--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCT-THHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHHh--cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCH-HHHHHcCCcccCEEEEEeCCEEEE
Confidence 4444432 45589999999999999999999999999996 6999999998765 788999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHH
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++.|.. +.++|+.+|.+
T Consensus 89 ~~~G~~-------~~~~l~~~l~~ 105 (108)
T 2trx_A 89 TKVGAL-------SKGQLKEFLDA 105 (108)
T ss_dssp EEESCC-------CHHHHHHHHHH
T ss_pred EEecCC-------CHHHHHHHHHH
Confidence 888763 34788888865
No 30
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.46 E-value=4.8e-13 Score=115.01 Aligned_cols=94 Identities=15% Similarity=0.267 Sum_probs=80.3
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|.+.+.+ ...+++|+||++||+.|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 12 ~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~ 88 (107)
T 2i4a_A 12 FDQDVLK--ASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNP-ETPNAYQVRSIPTLMLVRDGKVID 88 (107)
T ss_dssp HHHHTTT--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCC-HHHHHTTCCSSSEEEEEETTEEEE
T ss_pred hhHHHHh--CCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCH-HHHHhcCCCccCEEEEEeCCEEEE
Confidence 4444432 45689999999999999999999999999997 6999999998765 688999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHHC
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
++.|.. +.+.|..+|.++
T Consensus 89 ~~~G~~-------~~~~l~~~l~~~ 106 (107)
T 2i4a_A 89 KKVGAL-------PKSQLKAWVESA 106 (107)
T ss_dssp EEESCC-------CHHHHHHHHHHT
T ss_pred EecCCC-------CHHHHHHHHHhc
Confidence 888763 348899998764
No 31
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.46 E-value=1.9e-13 Score=119.12 Aligned_cols=85 Identities=11% Similarity=0.149 Sum_probs=75.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC-CchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG-CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~-~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
...+++|+||++||++|+.+.+.|.+++++|+++.|++|+.+ ..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 23 ~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--- 98 (111)
T 2pu9_C 23 GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCNQENK-TLAKELGIRVVPTFKILKENSVVGEVTGAK--- 98 (111)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTH-HHHHHHCCSBSSEEEEESSSSEEEEEESSC---
T ss_pred CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEEEEecCcchH-HHHHHcCCCeeeEEEEEeCCcEEEEEcCCC---
Confidence 355899999999999999999999999999999999999998 554 788999999999999999999999888762
Q ss_pred cCCCCHHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLVE 590 (612)
Q Consensus 576 g~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 99 -----~~~l~~~l~~ 108 (111)
T 2pu9_C 99 -----YDKLLEAIQA 108 (111)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHH
Confidence 3778888865
No 32
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.46 E-value=5.1e-13 Score=118.31 Aligned_cols=95 Identities=21% Similarity=0.390 Sum_probs=80.5
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
++|.+.+.+ ...+++|.||++||+.|+.+.+.|.+++++|. .++|++|+.+..+ .+..+|.+.++||+++|++|+.
T Consensus 21 ~~f~~~v~~--~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~ 97 (119)
T 1w4v_A 21 PDFQDRVVN--SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHT-DLAIEYEVSAVPTVLAMKNGDV 97 (119)
T ss_dssp HHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTH-HHHHHTTCCSSSEEEEEETTEE
T ss_pred hhHHHHHHc--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCH-HHHHHcCCCcccEEEEEeCCcE
Confidence 345555544 34589999999999999999999999999984 6999999999775 6889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++.|.. +.+.|+.+|.+
T Consensus 98 ~~~~~G~~-------~~~~l~~~l~~ 116 (119)
T 1w4v_A 98 VDKFVGIK-------DEDQLEAFLKK 116 (119)
T ss_dssp EEEEESCC-------CHHHHHHHHHH
T ss_pred EEEEcCCC-------CHHHHHHHHHH
Confidence 99888763 34788888865
No 33
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.46 E-value=2.5e-13 Score=124.10 Aligned_cols=95 Identities=14% Similarity=0.223 Sum_probs=80.3
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
..|.+.+.+ ...+++|.||++||+.|+.|.+.|.+|+++|+. ++|++|+.+..+ .+..+|.+.++||+++|++|+.
T Consensus 14 ~~f~~~~~~--~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~ 90 (140)
T 3hz4_A 14 MTWSQQVED--SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNP-WTAEKYGVQGTPTFKFFCHGRP 90 (140)
T ss_dssp HHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCH-HHHHHHTCCEESEEEEEETTEE
T ss_pred HhHHHHHHh--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCH-hHHHHCCCCcCCEEEEEeCCcE
Confidence 345545544 355899999999999999999999999999986 999999999876 7889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++.|... .+.|+.+|.+
T Consensus 91 ~~~~~G~~~-------~~~l~~~l~~ 109 (140)
T 3hz4_A 91 VWEQVGQIY-------PSILKNAVRD 109 (140)
T ss_dssp EEEEESSCC-------HHHHHHHHHH
T ss_pred EEEEcCCCC-------HHHHHHHHHH
Confidence 999988643 3677777654
No 34
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.46 E-value=3.9e-13 Score=117.05 Aligned_cols=93 Identities=17% Similarity=0.288 Sum_probs=79.1
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|.+.+.+ .+.+++|+||++||+.|+.+.+.|.+++++|+ .++|+.++.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 15 ~~~~~~~--~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~ 91 (112)
T 1t00_A 15 FEQDVLK--NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENP-GTAAKYGVMSIPTLNVYQGGEVAK 91 (112)
T ss_dssp HHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHhh--CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCH-HHHHhCCCCcccEEEEEeCCEEEE
Confidence 4444443 35589999999999999999999999999994 6999999999775 788999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHH
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++.|... .++|+.+|.+
T Consensus 92 ~~~G~~~-------~~~l~~~l~~ 108 (112)
T 1t00_A 92 TIVGAKP-------KAAIVRDLED 108 (112)
T ss_dssp EEESCCC-------HHHHHHHTHH
T ss_pred EEeCCCC-------HHHHHHHHHH
Confidence 9988643 3778888765
No 35
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.45 E-value=1.5e-13 Score=124.89 Aligned_cols=84 Identities=18% Similarity=0.144 Sum_probs=74.6
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecC---------CCchhchhhhCCCCCCcEEEEEECCEEeeEEEe
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPL---------GCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVR 570 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~---------~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg 570 (612)
+|+|+||++||++|+.+.+.|.+++++|+ ++|++|+. +..+ .+..+|.+.++||+++|++|+.+.+++|
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~-~l~~~~~v~~~Pt~~~~~~G~~v~~~~G 110 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIVMFIWGSLIGERELSAAR-LEMNKAGVEGTPTLVFYKEGRIVDKLVG 110 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHH-HHHHHHTCCSSSEEEEEETTEEEEEEES
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhH-HHHHHcCCceeCeEEEEcCCEEEEEEeC
Confidence 79999999999999999999999999998 99999998 6554 6778999999999999999999999999
Q ss_pred ccccccCCCCHHHHHHHHHHCC
Q psy12938 571 LGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 571 ~~~~~g~~~~~~~lE~~L~~~g 592 (612)
.... +.++.++.++.
T Consensus 111 ~~~~-------~~~~~~i~~~~ 125 (135)
T 3emx_A 111 ATPW-------SLKVEKAREIY 125 (135)
T ss_dssp CCCH-------HHHHHHHHHHC
T ss_pred CCCH-------HHHHHHHHHHh
Confidence 8555 67777776543
No 36
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.45 E-value=5.3e-13 Score=114.16 Aligned_cols=85 Identities=13% Similarity=0.284 Sum_probs=76.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
.+.+++|+||++||+.|+.+.+.|.+++++|++++|++++.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~----- 91 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNE-EAAAKYSVTAMPTFVFIKDGKEVDRFSGA----- 91 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESS-----
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEEEEeccCCH-HHHHHcCCccccEEEEEeCCcEEEEEeCC-----
Confidence 455899999999999999999999999999999999999999776 78899999999999999999999988774
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
+.++|+.+|.+
T Consensus 92 ---~~~~l~~~l~~ 102 (104)
T 2vim_A 92 ---NETKLRETITR 102 (104)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHh
Confidence 23778888865
No 37
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.45 E-value=4.5e-13 Score=120.69 Aligned_cols=86 Identities=13% Similarity=0.230 Sum_probs=76.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
...+++|.||++||+.|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 39 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~-- 115 (128)
T 2o8v_B 39 ADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAPKYGIRGIPTLLLFKNGEVAATKVGALS-- 115 (128)
T ss_dssp CSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCC-TTSGGGTCCSSSEEEEEETTEEEEEEESCCC--
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH-HHHHHcCCCccCEEEEEeCCEEEEEEcCCCC--
Confidence 45689999999999999999999999999997 6999999998765 6789999999999999999999999887633
Q ss_pred cCCCCHHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLVE 590 (612)
Q Consensus 576 g~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 116 -----~~~l~~~l~~ 125 (128)
T 2o8v_B 116 -----KGQLKEFLDA 125 (128)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHH
Confidence 4788888865
No 38
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.45 E-value=4.6e-13 Score=118.73 Aligned_cols=87 Identities=17% Similarity=0.290 Sum_probs=78.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEEC----CEEeeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRG----GEVVGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~----G~~~~~~vg~~~ 573 (612)
..+|+|+||++||++|+.+.+.|++++++|+.++|++|+.+..+ .+..+|.+.++||+++|++ |+.+.+++|+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~vd~~~~~-~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~- 100 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNG-NAADAYGVSSIPALFFVKKEGNEIKTLDQFVGAD- 100 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCC-
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEEEEECCCCH-HHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCC-
Confidence 45899999999999999999999999999988999999999776 7889999999999999999 99999999873
Q ss_pred cccCCCCHHHHHHHHHHCCc
Q psy12938 574 ELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~g~ 593 (612)
.++|+.++.++..
T Consensus 101 -------~~~l~~~~~~~~~ 113 (118)
T 2f51_A 101 -------VSRIKADIEKFKH 113 (118)
T ss_dssp -------HHHHHHHHHHHC-
T ss_pred -------HHHHHHHHHHhhh
Confidence 3569998887754
No 39
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.45 E-value=7.9e-13 Score=122.69 Aligned_cols=85 Identities=19% Similarity=0.384 Sum_probs=76.4
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
..++||+||++||++|+.|.+.|++|+++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|+
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~------ 104 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVP-EVSEKYEISSVPTFLFFKNSQKIDRLDGA------ 104 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH-HHHHHTTCCSSSEEEEEETTEEEEEEESS------
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCCCH-HHHHHcCCCCCCEEEEEECCEEEEEEeCC------
Confidence 45899999999999999999999999999999999999999776 78899999999999999999999988875
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
..++|+.+|.++
T Consensus 105 --~~~~l~~~i~~~ 116 (153)
T 2wz9_A 105 --HAPELTKKVQRH 116 (153)
T ss_dssp --CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHH
Confidence 236788888765
No 40
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.45 E-value=3.3e-13 Score=117.35 Aligned_cols=85 Identities=15% Similarity=0.360 Sum_probs=75.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
..+++|+||++||++|+.+.+.|++++++|+ +++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~--- 98 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVA-AVAEAAGITAMPTFHVYKDGVKADDLVGA-S--- 98 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTH-HHHHHHTCCBSSEEEEEETTEEEEEEESC-C---
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchH-HHHHHcCCCcccEEEEEECCeEEEEEcCC-C---
Confidence 3479999999999999999999999999998 8999999999775 78899999999999999999999988775 3
Q ss_pred CCCCHHHHHHHHHHC
Q psy12938 577 EGYFVEDVEAFLVEA 591 (612)
Q Consensus 577 ~~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.++
T Consensus 99 ----~~~l~~~l~~~ 109 (112)
T 1ep7_A 99 ----QDKLKALVAKH 109 (112)
T ss_dssp ----HHHHHHHHHHH
T ss_pred ----HHHHHHHHHHH
Confidence 37788888653
No 41
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.45 E-value=1.7e-13 Score=122.97 Aligned_cols=87 Identities=11% Similarity=0.227 Sum_probs=77.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
++.+|+|+||++||++|+.+.+.|++++++|+ +++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~--- 116 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNE-SLARKFSVKSLPTIILLKNKTMLARKDHFV--- 116 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCH-HHHHHTTCCSSSEEEEEETTEEEEEESSCC---
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCH-HHHHHcCCCCcCEEEEEECCEEEEEecCCC---
Confidence 45689999999999999999999999999996 6999999999776 788999999999999999999999887763
Q ss_pred cCCCCHHHHHHHHHHC
Q psy12938 576 GEGYFVEDVEAFLVEA 591 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~ 591 (612)
+.++|+.+|.++
T Consensus 117 ----~~~~l~~~l~~~ 128 (128)
T 3ul3_B 117 ----SSNDLIALIKKH 128 (128)
T ss_dssp ----CHHHHHHHHTTC
T ss_pred ----CHHHHHHHHHhC
Confidence 448999998654
No 42
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.44 E-value=4.3e-13 Score=118.07 Aligned_cols=84 Identities=21% Similarity=0.402 Sum_probs=75.1
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
++.+++|+||++||++|+.+.+.|++++++| +++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~----- 104 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFVKVDVDKLE-ETARKYNISAMPTFIAIKNGEKVGDVVGA----- 104 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEEEEETTTSH-HHHHHTTCCSSSEEEEEETTEEEEEEESS-----
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEEEEECCccH-HHHHHcCCCccceEEEEeCCcEEEEEeCC-----
Confidence 3458999999999999999999999999999 9999999999776 78899999999999999999999988874
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
+.++|+.+|.+
T Consensus 105 ---~~~~l~~~l~~ 115 (117)
T 2xc2_A 105 ---SIAKVEDMIKK 115 (117)
T ss_dssp ---CHHHHHHHHHH
T ss_pred ---CHHHHHHHHHH
Confidence 23778888865
No 43
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.44 E-value=2.4e-13 Score=123.50 Aligned_cols=85 Identities=19% Similarity=0.307 Sum_probs=75.8
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+|+|+||++||++|+.+.+.|++++++|+++.|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~---- 119 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELS-DFSASWEIKATPTFFFLRDGQQVDKLVGA-N---- 119 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH-HHHHHTTCCEESEEEEEETTEEEEEEESC-C----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCcccH-HHHHHcCCCcccEEEEEcCCeEEEEEeCC-C----
Confidence 34799999999999999999999999999999999999999876 78899999999999999999999988876 2
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.++
T Consensus 120 ---~~~l~~~l~~~ 130 (139)
T 3d22_A 120 ---KPELHKKITAI 130 (139)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---HHHHHHHHHHH
Confidence 36788877653
No 44
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.44 E-value=7.8e-13 Score=113.50 Aligned_cols=85 Identities=18% Similarity=0.296 Sum_probs=75.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhc-CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSH-TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
+.+++|+||++||+.|+.+.+.|++++++| +++.|++++.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 20 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~----- 93 (106)
T 1xwb_A 20 GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECE-DIAMEYNISSMPTFVFLKNGVKVEEFAGA----- 93 (106)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESC-----
T ss_pred CCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchH-HHHHHcCCCcccEEEEEcCCcEEEEEcCC-----
Confidence 458999999999999999999999999999 78999999999776 78899999999999999999999988763
Q ss_pred CCCCHHHHHHHHHHC
Q psy12938 577 EGYFVEDVEAFLVEA 591 (612)
Q Consensus 577 ~~~~~~~lE~~L~~~ 591 (612)
+.++|+.+|.++
T Consensus 94 ---~~~~l~~~i~~~ 105 (106)
T 1xwb_A 94 ---NAKRLEDVIKAN 105 (106)
T ss_dssp ---CHHHHHHHHHHT
T ss_pred ---CHHHHHHHHHHh
Confidence 237788888753
No 45
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.44 E-value=6.4e-13 Score=114.47 Aligned_cols=86 Identities=10% Similarity=0.203 Sum_probs=77.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
+.+++|+||++||+.|+.+.+.|..++++|+ .+.|+.++.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~--- 96 (109)
T 3tco_A 21 NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQ-KIADKYSVLNIPTTLIFVNGQLVDSLVGAVD--- 96 (109)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESCCC---
T ss_pred CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCH-HHHHhcCcccCCEEEEEcCCcEEEeeeccCC---
Confidence 3489999999999999999999999999997 6999999999876 7889999999999999999999999888643
Q ss_pred CCCCHHHHHHHHHHC
Q psy12938 577 EGYFVEDVEAFLVEA 591 (612)
Q Consensus 577 ~~~~~~~lE~~L~~~ 591 (612)
.++|..+|.++
T Consensus 97 ----~~~l~~~l~~~ 107 (109)
T 3tco_A 97 ----EDTLESTVNKY 107 (109)
T ss_dssp ----HHHHHHHHHHH
T ss_pred ----HHHHHHHHHHH
Confidence 47888888753
No 46
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.43 E-value=9.8e-13 Score=112.68 Aligned_cols=93 Identities=10% Similarity=0.253 Sum_probs=79.5
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|...+.. ...++++.||++||+.|+.+.+.|.+++++|+. ++|+.++.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 10 ~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~ 86 (105)
T 1fb6_A 10 WKEFVLE--SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAP-GIATQYNIRSIPTVLFFKNGERKE 86 (105)
T ss_dssp HHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHhc--CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchH-HHHHhCCCCcccEEEEEeCCeEEE
Confidence 4444443 355899999999999999999999999999974 999999998775 688999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHH
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++.|.... ++++.+|.+
T Consensus 87 ~~~G~~~~-------~~l~~~l~~ 103 (105)
T 1fb6_A 87 SIIGAVPK-------STLTDSIEK 103 (105)
T ss_dssp EEEECCCH-------HHHHHHHHH
T ss_pred EEecCCCH-------HHHHHHHHh
Confidence 99887443 788888865
No 47
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.43 E-value=6.4e-13 Score=115.00 Aligned_cols=85 Identities=20% Similarity=0.385 Sum_probs=76.0
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhc----CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSH----TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~----~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
.+++|+||++||++|+.+.+.|..++++| +.++|++++.+..+ .+..+|.+..+||+++|++|+.+.++.|..
T Consensus 22 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~-- 98 (111)
T 3uvt_A 22 GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAER-NICSKYSVRGYPTLLLFRGGKKVSEHSGGR-- 98 (111)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEECSCC--
T ss_pred CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccH-hHHHhcCCCcccEEEEEeCCcEEEeccCCc--
Confidence 37999999999999999999999999997 47999999999776 788999999999999999999999887753
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
+.+.|..+|.++
T Consensus 99 -----~~~~l~~~l~~~ 110 (111)
T 3uvt_A 99 -----DLDSLHRFVLSQ 110 (111)
T ss_dssp -----SHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHhc
Confidence 448999998764
No 48
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.43 E-value=8.6e-13 Score=112.33 Aligned_cols=85 Identities=18% Similarity=0.281 Sum_probs=76.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+++|+||++||+.|+.+.+.|.+++++|++++|+.++.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 16 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~---- 90 (104)
T 2e0q_A 16 HEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENP-DIAARYGVMSLPTVIFFKDGEPVDEIIGAVP---- 90 (104)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCH-HHHHHTTCCSSCEEEEEETTEEEEEEESCCC----
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEEEEECCCCH-HHHHhCCccccCEEEEEECCeEhhhccCCCC----
Confidence 34899999999999999999999999999988999999999775 7889999999999999999999998887633
Q ss_pred CCCHHHHHHHHHH
Q psy12938 578 GYFVEDVEAFLVE 590 (612)
Q Consensus 578 ~~~~~~lE~~L~~ 590 (612)
.++|..+|.+
T Consensus 91 ---~~~l~~~l~~ 100 (104)
T 2e0q_A 91 ---REEIEIRIKN 100 (104)
T ss_dssp ---HHHHHHHHHH
T ss_pred ---HHHHHHHHHH
Confidence 4788888865
No 49
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.43 E-value=5.5e-13 Score=118.52 Aligned_cols=84 Identities=12% Similarity=0.200 Sum_probs=75.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC-CchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG-CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~-~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
+.+++|+||++||++|+.+.+.|++++++|++++|++++.+ ..+ .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~vd~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~---- 111 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENK-TLAKELGIRVVPTFKILKENSVVGEVTGAK---- 111 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSTTH-HHHHHHCCSSSSEEEEEETTEEEEEEESSC----
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEEEEecCcchH-HHHHHcCCCeeeEEEEEeCCcEEEEEcCCC----
Confidence 45799999999999999999999999999999999999987 444 688999999999999999999999988762
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 112 ----~~~l~~~i~~ 121 (124)
T 1faa_A 112 ----YDKLLEAIQA 121 (124)
T ss_dssp ----HHHHHHHHHH
T ss_pred ----HHHHHHHHHH
Confidence 3778888865
No 50
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.43 E-value=6.2e-13 Score=114.63 Aligned_cols=95 Identities=12% Similarity=0.286 Sum_probs=80.5
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
..|.+.+.+ .+.+++|+||++||+.|+.+.+.|++++++|+ .++|+.|+.+..+ .+..+|++.++||+++|++|+.
T Consensus 9 ~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~ 85 (107)
T 1dby_A 9 DTFKNVVLE--SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESP-NVASEYGIRSIPTIMVFKGGKK 85 (107)
T ss_dssp HHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHHTCCSSCEEEEESSSSE
T ss_pred HHHHHHHhc--CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCH-HHHHHCCCCcCCEEEEEeCCEE
Confidence 345555543 35589999999999999999999999999997 5999999998775 6889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++.|.... ++|+.+|.+
T Consensus 86 ~~~~~G~~~~-------~~l~~~l~~ 104 (107)
T 1dby_A 86 CETIIGAVPK-------ATIVQTVEK 104 (107)
T ss_dssp EEEEESCCCH-------HHHHHHHHH
T ss_pred EEEEeCCCCH-------HHHHHHHHH
Confidence 9998886433 788888865
No 51
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.43 E-value=4.8e-13 Score=121.35 Aligned_cols=85 Identities=12% Similarity=0.203 Sum_probs=75.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEE--CCE--EeeEEEecc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYR--GGE--VVGNFVRLG 572 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk--~G~--~~~~~vg~~ 572 (612)
++.+|||+||++||++|+.|.+.|++++++| .+.|++|+.+..+ .+..+|.+.++||+++|+ +|+ .+.++.|+
T Consensus 39 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~- 115 (133)
T 3cxg_A 39 QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLVDIDVDIHP-KLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA- 115 (133)
T ss_dssp CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEEEEETTTCH-HHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEEEEeccchH-HHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-
Confidence 4568999999999999999999999999998 7999999999775 788999999999999998 999 88888776
Q ss_pred ccccCCCCHHHHHHHHHHC
Q psy12938 573 EELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 573 ~~~g~~~~~~~lE~~L~~~ 591 (612)
. .++|+.+|.+.
T Consensus 116 ~-------~~~l~~~l~~~ 127 (133)
T 3cxg_A 116 N-------QNDIEKAFQKY 127 (133)
T ss_dssp C-------HHHHHHHHHHH
T ss_pred C-------HHHHHHHHHHH
Confidence 2 47888888764
No 52
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.43 E-value=1e-12 Score=114.49 Aligned_cols=87 Identities=13% Similarity=0.215 Sum_probs=77.1
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
...+++|+||++||+.|+.+.+.|++++++|+ .++|+.|+.+..+ .+..+|.+..+||+++|++|+.+.++.|...
T Consensus 24 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~-- 100 (115)
T 1thx_A 24 AEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNP-TTVKKYKVEGVPALRLVKGEQILDSTEGVIS-- 100 (115)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESCCC--
T ss_pred CCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCH-HHHHHcCCCceeEEEEEcCCEEEEEecCCCC--
Confidence 45589999999999999999999999999997 6999999999775 7889999999999999999999998887633
Q ss_pred cCCCCHHHHHHHHHHC
Q psy12938 576 GEGYFVEDVEAFLVEA 591 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.++
T Consensus 101 -----~~~l~~~l~~~ 111 (115)
T 1thx_A 101 -----KDKLLSFLDTH 111 (115)
T ss_dssp -----HHHHHHHHHHH
T ss_pred -----HHHHHHHHHHH
Confidence 47888888753
No 53
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.42 E-value=4.7e-13 Score=136.77 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=78.5
Q ss_pred CCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 496 PRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 496 ~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
++..+|+|+||++||++|+.|.+.|++++++|++ ++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|....
T Consensus 24 ~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~ 102 (287)
T 3qou_A 24 SMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQ-MIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPE 102 (287)
T ss_dssp TTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCH-HHHHTTTCCSSSEEEEEETTEEEEEEESCCCH
T ss_pred cCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCH-HHHHHcCCCCCCeEEEEECCEEEEEeeCCCCH
Confidence 3467999999999999999999999999999986 999999999876 78899999999999999999999999886443
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
+.++.+|.++
T Consensus 103 -------~~l~~~l~~~ 112 (287)
T 3qou_A 103 -------EAIRALLDXV 112 (287)
T ss_dssp -------HHHHHHHHHH
T ss_pred -------HHHHHHHHHH
Confidence 7788887664
No 54
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.42 E-value=6.3e-13 Score=115.59 Aligned_cols=85 Identities=15% Similarity=0.418 Sum_probs=74.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
.+.+++|+||++||+.|+.+.+.|.+++++|+++.|+.|+.+..+ .+..+|.+.++||+++|++|+.+.++.|+ .
T Consensus 25 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~-~--- 99 (113)
T 1ti3_A 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELK-AVAEEWNVEAMPTFIFLKDGKLVDKTVGA-D--- 99 (113)
T ss_dssp SSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEEEEETTTCH-HHHHHHHCSSTTEEEEEETTEEEEEEECC-C---
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEEEEEccccH-HHHHhCCCCcccEEEEEeCCEEEEEEecC-C---
Confidence 355899999999999999999999999999999999999999775 68899999999999999999999988874 2
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 100 ----~~~l~~~l~~ 109 (113)
T 1ti3_A 100 ----KDGLPTLVAK 109 (113)
T ss_dssp ----TTHHHHHHHH
T ss_pred ----HHHHHHHHHH
Confidence 2567777654
No 55
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.41 E-value=1.1e-12 Score=120.74 Aligned_cols=87 Identities=20% Similarity=0.390 Sum_probs=77.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhc-CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSH-TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
...+|+|+||++||++|+.|.+.|++++++| +.+.|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|...
T Consensus 54 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~-- 130 (148)
T 3p2a_A 54 DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEP-ALSTRFRIRSIPTIMLYRNGKMIDMLNGAVP-- 130 (148)
T ss_dssp CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEESSCCC--
T ss_pred cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCH-HHHHHCCCCccCEEEEEECCeEEEEEeCCCC--
Confidence 4558999999999999999999999999999 57999999999876 7889999999999999999999998877633
Q ss_pred cCCCCHHHHHHHHHHC
Q psy12938 576 GEGYFVEDVEAFLVEA 591 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~ 591 (612)
.+.|..||.++
T Consensus 131 -----~~~l~~~l~~~ 141 (148)
T 3p2a_A 131 -----KAPFDNWLDEQ 141 (148)
T ss_dssp -----HHHHHHHHHHH
T ss_pred -----HHHHHHHHHHH
Confidence 48888888753
No 56
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.40 E-value=9.9e-13 Score=112.92 Aligned_cols=85 Identities=19% Similarity=0.387 Sum_probs=75.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
+.+++|+||++||+.|+.+.+.|++++++|++ ++|+.++.+..+ .+..+|.+.++||+++|++|+.+.++.|....
T Consensus 17 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~-- 93 (105)
T 1nsw_A 17 DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENP-ETTSQFGIMSIPTLILFKGGRPVKQLIGYQPK-- 93 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESCCCH--
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCH-HHHHHcCCccccEEEEEeCCeEEEEEecCCCH--
Confidence 34899999999999999999999999999975 999999999775 78899999999999999999999988876433
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
++|+.+|.+
T Consensus 94 -----~~l~~~l~~ 102 (105)
T 1nsw_A 94 -----EQLEAQLAD 102 (105)
T ss_dssp -----HHHHHHTTT
T ss_pred -----HHHHHHHHH
Confidence 778887753
No 57
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.40 E-value=1.3e-12 Score=114.42 Aligned_cols=84 Identities=19% Similarity=0.345 Sum_probs=74.9
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
.+++|+||++||+.|+.+.+.|.+++++|++++|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 29 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~------- 100 (118)
T 2vm1_A 29 KLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELK-DVAEAYNVEAMPTFLFIKDGEKVDSVVGG------- 100 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTSH-HHHHHTTCCSBSEEEEEETTEEEEEEESC-------
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEcccCH-HHHHHcCCCcCcEEEEEeCCeEEEEecCC-------
Confidence 4799999999999999999999999999999999999999775 67899999999999999999999988774
Q ss_pred CCHHHHHHHHHHC
Q psy12938 579 YFVEDVEAFLVEA 591 (612)
Q Consensus 579 ~~~~~lE~~L~~~ 591 (612)
..++|+.+|.++
T Consensus 101 -~~~~l~~~l~~~ 112 (118)
T 2vm1_A 101 -RKDDIHTKIVAL 112 (118)
T ss_dssp -CHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 246788877653
No 58
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.2e-12 Score=117.48 Aligned_cols=94 Identities=14% Similarity=0.215 Sum_probs=77.9
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-----CceEEEecCCCchhchhhhCCCCCCcEEEEEECC
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-----NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGG 562 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-----~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G 562 (612)
|.+.+.+ ...+++|+||++||++|+.+.+.|.+++++|. .++|++|+.+..+ .+..+|.+.++||+++|++|
T Consensus 17 ~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g 93 (133)
T 1x5d_A 17 FDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQ-VLASRYGIRGFPTIKIFQKG 93 (133)
T ss_dssp HHHHTTT--SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCC-HHHHHHTCCSSSEEEEEETT
T ss_pred HHHHHhc--CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCH-HHHHhCCCCeeCeEEEEeCC
Confidence 4444433 34589999999999999999999999999984 6999999998765 68899999999999999999
Q ss_pred EEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 563 EVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 563 ~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+.+.++.|.. +.++|..+|.++
T Consensus 94 ~~~~~~~G~~-------~~~~l~~~l~~~ 115 (133)
T 1x5d_A 94 ESPVDYDGGR-------TRSDIVSRALDL 115 (133)
T ss_dssp EEEEEECSCC-------SHHHHHHHHHHH
T ss_pred CceEEecCCC-------CHHHHHHHHHHH
Confidence 9888887753 347777777654
No 59
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.40 E-value=1.1e-12 Score=115.56 Aligned_cols=93 Identities=13% Similarity=0.285 Sum_probs=78.9
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|...+.+ .+.+++|+||++||+.|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 22 ~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~i~~~Pt~~~~~~g~~~~ 98 (121)
T 2i1u_A 22 FATDVLS--SNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNP-ETARNFQVVSIPTLILFKDGQPVK 98 (121)
T ss_dssp HHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEE
T ss_pred HHHHHHh--CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCH-HHHHhcCCCcCCEEEEEECCEEEE
Confidence 4444443 34589999999999999999999999999996 6999999999775 788999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHH
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++.|... .+.|..+|.+
T Consensus 99 ~~~G~~~-------~~~l~~~l~~ 115 (121)
T 2i1u_A 99 RIVGAKG-------KAALLRELSD 115 (121)
T ss_dssp EEESCCC-------HHHHHHHTCS
T ss_pred EecCCCC-------HHHHHHHHHH
Confidence 8888643 3778888753
No 60
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.40 E-value=2.3e-12 Score=118.46 Aligned_cols=82 Identities=12% Similarity=0.100 Sum_probs=69.3
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhc-CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSH-TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|...+.+. .+.+|+|+||++||++|+.+.+.|++|+++| +.++|++||.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 14 ~~~~v~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~-~~~~~~~i~~~Pt~~~~~~G~~v~ 91 (142)
T 1qgv_A 14 VDQAILSE-EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVP-DFNKMYELYDPCTVMFFFRNKHIM 91 (142)
T ss_dssp HHHHHHTC-SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCC-TTTTSSCSCSSCEEEEEETTEEEE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCH-HHHHHcCCCCCCEEEEEECCcEEE
Confidence 44444431 3468999999999999999999999999999 56999999999776 688999999999999999999998
Q ss_pred EEEec
Q psy12938 567 NFVRL 571 (612)
Q Consensus 567 ~~vg~ 571 (612)
...|.
T Consensus 92 ~~~g~ 96 (142)
T 1qgv_A 92 IDLGT 96 (142)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 65553
No 61
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.39 E-value=1e-12 Score=116.84 Aligned_cols=86 Identities=12% Similarity=0.288 Sum_probs=76.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
...+++|.||++||+.|+.+.+.|++++++|+. +.|++|+.+..+ .+..+|.+.++||+++|++|+.+.++.|. .
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~-~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~- 108 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQS-QIAQEVGIRAMPTFVFFKNGQKIDTVVGA-D- 108 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCH-HHHHHHTCCSSSEEEEEETTEEEEEEESS-C-
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCH-HHHHHcCCCcccEEEEEECCeEEeeEcCC-C-
Confidence 355899999999999999999999999999986 999999999776 68899999999999999999999988775 3
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
.++|+.+|.+.
T Consensus 109 ------~~~l~~~l~~~ 119 (121)
T 2j23_A 109 ------PSKLQAAITQH 119 (121)
T ss_dssp ------HHHHHHHHHHH
T ss_pred ------HHHHHHHHHHh
Confidence 47888888753
No 62
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.39 E-value=1.6e-12 Score=128.27 Aligned_cols=95 Identities=14% Similarity=0.252 Sum_probs=81.4
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~ 566 (612)
|.+.+.+ +..+|+|+||++||++|+.|.+.|++|+++|+. ++|++|+.+..+ .+..+|.+.++||+++|++|+.+.
T Consensus 22 f~~~v~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~-~l~~~~~v~~~Pt~~~~~~G~~~~ 98 (222)
T 3dxb_A 22 FDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAPKYGIRGIPTLLLFKNGEVAA 98 (222)
T ss_dssp HHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCT-TTGGGGTCCSBSEEEEEETTEEEE
T ss_pred HHHHHHh--cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCH-HHHHHcCCCcCCEEEEEECCeEEE
Confidence 4444443 355899999999999999999999999999986 999999999776 788999999999999999999999
Q ss_pred EEEeccccccCCCCHHHHHHHHHHCC
Q psy12938 567 NFVRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 567 ~~vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
++.|... .++|+.+|.+.-
T Consensus 99 ~~~G~~~-------~~~l~~~l~~~l 117 (222)
T 3dxb_A 99 TKVGALS-------KGQLKEFLDANL 117 (222)
T ss_dssp EEESCCC-------HHHHHHHHHHHS
T ss_pred EeccccC-------hHHHHHHHHhhc
Confidence 9988643 488888887653
No 63
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.38 E-value=1.6e-12 Score=117.98 Aligned_cols=86 Identities=13% Similarity=0.131 Sum_probs=75.4
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEE-ECCEEeeEEEecccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAY-RGGEVVGNFVRLGEE 574 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvy-k~G~~~~~~vg~~~~ 574 (612)
...+++|+||++||++|+.+.+.|.+++++|+ .++|++|+.+..+ .+..+|.+.++||+++| ++|+.+ .+.|.
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~--- 111 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQ-ELAGAFGIRSIPSILFIPMEGKPE-MAQGA--- 111 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSCEEEEECSSSCCE-EEESC---
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCH-HHHHHcCCCCCCEEEEECCCCcEE-EEeCC---
Confidence 34689999999999999999999999999997 6999999999775 78899999999999999 999987 56654
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
.+.++|+.+|.++
T Consensus 112 ----~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 112 ----MPKASFKKAIDEF 124 (136)
T ss_dssp ----CCHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHH
Confidence 3558899999865
No 64
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.38 E-value=2.2e-12 Score=110.86 Aligned_cols=85 Identities=12% Similarity=0.230 Sum_probs=76.1
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
.+++|.||++||+.|+.+.+.|++++++|+ .+.|+.++.+..+ .+..+|.+.++||+++|++|+.+..+.|..
T Consensus 19 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~----- 92 (109)
T 2yzu_A 19 PLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENP-KTAMRYRVMSIPTVILFKDGQPVEVLVGAQ----- 92 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEEEEESCC-----
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCH-hHHHhCCCCcCCEEEEEeCCcEeeeEeCCC-----
Confidence 489999999999999999999999999997 6999999998775 788999999999999999999999888763
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
+.++|+.+|.+.
T Consensus 93 --~~~~l~~~l~~~ 104 (109)
T 2yzu_A 93 --PKRNYQAKIEKH 104 (109)
T ss_dssp --CHHHHHHHHHTT
T ss_pred --CHHHHHHHHHHH
Confidence 348899988753
No 65
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.38 E-value=8.1e-13 Score=118.29 Aligned_cols=87 Identities=15% Similarity=0.129 Sum_probs=73.6
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhc------CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEee--EEE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSH------TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVG--NFV 569 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~------~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~--~~v 569 (612)
..+|+|+||++||++|+.|.+.|++||.+| +.+.|++||.+..+ .+..+|.+.++||+++|++|..+. .+.
T Consensus 33 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~ 111 (127)
T 3h79_A 33 EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYP-DVIERMRVSGFPTMRYYTRIDKQEPFEYS 111 (127)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCH-HHHHHTTCCSSSEEEEECSSCSSSCEECC
T ss_pred CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccH-hHHHhcCCccCCEEEEEeCCCCCCceEec
Confidence 458999999999999999999999999764 46999999999876 788999999999999999987653 232
Q ss_pred eccccccCCCCHHHHHHHHHHCC
Q psy12938 570 RLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 570 g~~~~~g~~~~~~~lE~~L~~~g 592 (612)
| ..+.+.|..||.+++
T Consensus 112 G-------~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 112 G-------QRYLSLVDSFVFQNT 127 (127)
T ss_dssp S-------CCCHHHHHHHHHHHC
T ss_pred C-------CccHHHHHHHHHhcC
Confidence 2 256799999998764
No 66
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.38 E-value=1.2e-12 Score=119.10 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=74.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEE-ECCEEeeEEEecccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAY-RGGEVVGNFVRLGEE 574 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvy-k~G~~~~~~vg~~~~ 574 (612)
...+|+|+||++||++|+.+.+.|.+++++|+ .+.|++|+.+..+ .+..+|.+.++||+++| ++|+.+ .+.|..
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~~g~~~-~~~G~~-- 125 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEP-ELARDFGIQSIPTIWFVPMKGEPQ-VNMGAL-- 125 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEECSSSCCE-EEESCC--
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCH-HHHHHcCCCCcCEEEEEeCCCCEE-EEeCCC--
Confidence 35689999999999999999999999999997 6999999999876 78899999999999999 677766 676653
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
+.++|+.+|.++
T Consensus 126 -----~~~~l~~~l~~~ 137 (141)
T 3hxs_A 126 -----SKEQLKGYIDKV 137 (141)
T ss_dssp -----CHHHHHHHHHHT
T ss_pred -----CHHHHHHHHHHH
Confidence 448899998764
No 67
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=5.3e-13 Score=121.22 Aligned_cols=77 Identities=21% Similarity=0.374 Sum_probs=69.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCchhchhhhCCCC------CCcEEEEEECCEEeeEE
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVGDHFSATFKTS------GLPAMLAYRGGEVVGNF 568 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~d~~~~~~~i~------~lPtllvyk~G~~~~~~ 568 (612)
+..+|+|+||++||++|+.+.+.|++++++|. .++|++|+.+..+ .+..+|.+. ++||+++|++|+.+.++
T Consensus 25 ~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~ 103 (137)
T 2dj0_A 25 KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYT-DVSTRYKVSTSPLTKQLPTLILFQGGKEAMRR 103 (137)
T ss_dssp TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCH-HHHHHTTCCCCSSSSCSSEEEEESSSSEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCH-HHHHHccCcccCCcCCCCEEEEEECCEEEEEe
Confidence 44589999999999999999999999999995 6999999999776 788999999 99999999999999999
Q ss_pred Eecccc
Q psy12938 569 VRLGEE 574 (612)
Q Consensus 569 vg~~~~ 574 (612)
.|....
T Consensus 104 ~G~~~~ 109 (137)
T 2dj0_A 104 PQIDKK 109 (137)
T ss_dssp SCBCSS
T ss_pred cCcCch
Confidence 887554
No 68
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.37 E-value=8.4e-13 Score=116.85 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=80.8
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
..|.+.+.+ ...+++|+||++||++|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|..
T Consensus 11 ~~f~~~~~~--~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~~~~ 87 (122)
T 3aps_A 11 QTFNEKVLQ--GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYP-QTCQKAGIKAYPSVKLYQYERA 87 (122)
T ss_dssp HHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEEEEGG
T ss_pred HHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCH-HHHHHcCCCccceEEEEeCCCc
Confidence 345444543 34589999999999999999999999999997 7999999999775 7889999999999999987777
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+.++.|.. . ...+.+.|+.+|.+.
T Consensus 88 ~~~~~g~~-~--~~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 88 KKSIWEEQ-I--NSRDAKTIAALIYGK 111 (122)
T ss_dssp GTEEEEEE-E--CCSCHHHHHHHHHHH
T ss_pred cceeeccc-c--CcCCHHHHHHHHHHH
Confidence 88888862 1 124567888888653
No 69
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.36 E-value=1.7e-12 Score=115.82 Aligned_cols=89 Identities=13% Similarity=0.189 Sum_probs=78.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhc-CCceEEEec--CCCchhchhhhCCCCCCcEEEEEE-CCEEeeEEEecc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSH-TNVKFVSVP--LGCVGDHFSATFKTSGLPAMLAYR-GGEVVGNFVRLG 572 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-~~vkF~ki~--~~~~~d~~~~~~~i~~lPtllvyk-~G~~~~~~vg~~ 572 (612)
...+++|+||++||+.|+.+.+.|.+++++| ++++|++|+ .+... .+..+|.+.++||+++|+ +|+.+.++.|..
T Consensus 25 ~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~-~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~ 103 (126)
T 2l57_A 25 EGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNI-DLAYKYDANIVPTTVFLDKEGNKFYVHQGLM 103 (126)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHH-HHHHHTTCCSSSEEEEECTTCCEEEEEESCC
T ss_pred CCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchH-HHHHHcCCcceeEEEEECCCCCEEEEecCCC
Confidence 4558999999999999999999999999999 689999999 77665 688999999999999999 999999988864
Q ss_pred ccccCCCCHHHHHHHHHHCCc
Q psy12938 573 EELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 573 ~~~g~~~~~~~lE~~L~~~g~ 593 (612)
. .++|+.+|.++.-
T Consensus 104 ~-------~~~l~~~l~~~~~ 117 (126)
T 2l57_A 104 R-------KNNIETILNSLGV 117 (126)
T ss_dssp C-------HHHHHHHHHHHCC
T ss_pred C-------HHHHHHHHHHHhc
Confidence 3 4889999987643
No 70
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.36 E-value=4.8e-13 Score=123.27 Aligned_cols=84 Identities=18% Similarity=0.245 Sum_probs=66.7
Q ss_pred eEEEEEeCCC--ChhhhhhHHHHHHHHhhcCCce--EEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 500 TVIAHLSSPS--LPACRALNSSLAELSRSHTNVK--FVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 500 ~Vvvhfy~~~--~~~C~~m~~~l~~LA~~~~~vk--F~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
.+||.||++| |++|+.|.|.|++||++|+.++ |++||++..+ .++.+|.+.++||+++|++|+.+++++|....
T Consensus 36 ~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~-~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~- 113 (142)
T 2es7_A 36 DGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVAVADLEQSE-AIGDRFNVRRFPATLVFTDGKLRGALSGIHPW- 113 (142)
T ss_dssp SEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEEEECHHHHH-HHHHTTTCCSSSEEEEESCC----CEESCCCH-
T ss_pred CEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEEEEECCCCH-HHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCH-
Confidence 4788899887 9999999999999999997799 9999999776 78899999999999999999999999987444
Q ss_pred cCCCCHHHHHHHHHHC
Q psy12938 576 GEGYFVEDVEAFLVEA 591 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~ 591 (612)
++|+.+|.++
T Consensus 114 ------~~l~~~i~~~ 123 (142)
T 2es7_A 114 ------AELLTLMRSI 123 (142)
T ss_dssp ------HHHHHHHHHH
T ss_pred ------HHHHHHHHHH
Confidence 7788888754
No 71
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.35 E-value=2.1e-12 Score=117.14 Aligned_cols=85 Identities=14% Similarity=0.287 Sum_probs=73.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC----ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN----VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~----vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~ 573 (612)
..+|+|+||++||+.|+.+.+.|.+++++|.. +.|++||.+... .+..+|.+.++||+++|++|+ +.++.|.
T Consensus 34 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~-~~~~~g~-- 109 (140)
T 2dj1_A 34 KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSAS-MLASKFDVSGYPTIKILKKGQ-AVDYDGS-- 109 (140)
T ss_dssp CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCH-HHHHHTTCCSSSEEEEEETTE-EEECCSC--
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccH-HHHHHCCCCccCeEEEEECCc-EEEcCCC--
Confidence 45899999999999999999999999998853 999999998765 688999999999999999999 5555553
Q ss_pred cccCCCCHHHHHHHHHHC
Q psy12938 574 ELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~ 591 (612)
.+.++|..||.++
T Consensus 110 -----~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 110 -----RTQEEIVAKVREV 122 (140)
T ss_dssp -----CCHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHh
Confidence 3558899998764
No 72
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.35 E-value=2.7e-13 Score=119.03 Aligned_cols=84 Identities=12% Similarity=0.031 Sum_probs=71.9
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch---hchhhhCCCC-CCcEEEEEECCEEeeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG---DHFSATFKTS-GLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~---d~~~~~~~i~-~lPtllvyk~G~~~~~~vg~~~ 573 (612)
+.+|+|.|+++||++|+++.+.|++++.+ ++++|++||+++.. +.++++|.++ ..|++++||||+.+.+-.--
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~-- 100 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHG-- 100 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGG--
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEeecc--
Confidence 45899999999999999999999999987 88999999999764 2478999999 59999999999999975432
Q ss_pred cccCCCCHHHHHHHH
Q psy12938 574 ELGEGYFVEDVEAFL 588 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L 588 (612)
+++.+.|+..|
T Consensus 101 ----~I~~~~l~~~~ 111 (112)
T 3iv4_A 101 ----DINVSSLAQAE 111 (112)
T ss_dssp ----GCSHHHHHHHT
T ss_pred ----ccCHHHHHHhh
Confidence 56667777654
No 73
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.35 E-value=9.2e-13 Score=117.90 Aligned_cols=93 Identities=14% Similarity=0.275 Sum_probs=74.8
Q ss_pred HHHhhccCCCCceEEEEEeCCCCh--------------hhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCC
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLP--------------ACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSG 552 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~--------------~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~ 552 (612)
|...+.+ .+.+|+|+||++||+ +|+.|.+.|++++++|+ .++|++|+.+..+ .+..+|.+.+
T Consensus 13 f~~~~~~--~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~-~l~~~~~v~~ 89 (123)
T 1oaz_A 13 FDTDVLK--ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNP-GTAPKYGIRG 89 (123)
T ss_dssp HHHHTTS--CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCT-TTGGGGTCCB
T ss_pred HHHHHHh--CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCH-HHHHHcCCCc
Confidence 4444433 456899999999999 99999999999999996 6999999999776 7889999999
Q ss_pred CcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 553 LPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 553 lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+||+++|++|+.+.++.|... .++|+.+|.+
T Consensus 90 ~Pt~~~~~~G~~~~~~~G~~~-------~~~l~~~l~~ 120 (123)
T 1oaz_A 90 IPTLLLFKNGEVAATKVGALS-------KGQLKEFLDA 120 (123)
T ss_dssp SSEEEEEESSSEEEEEESCCC-------HHHHHHHHTT
T ss_pred cCEEEEEECCEEEEEEeCCCC-------HHHHHHHHHH
Confidence 999999999999999988643 4888888864
No 74
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.35 E-value=1.7e-12 Score=123.73 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=80.9
Q ss_pred HHHHHhhccCCCCceEEEEEeC-------CCChhhhhhHHHHHHHHhhc------CCceEEEecCCCchhchhhhCCCCC
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSS-------PSLPACRALNSSLAELSRSH------TNVKFVSVPLGCVGDHFSATFKTSG 552 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~-------~~~~~C~~m~~~l~~LA~~~------~~vkF~ki~~~~~~d~~~~~~~i~~ 552 (612)
..|.+.|. .+++.+|||.||| +||++|+.|.|.|++||++| ..++|++||++..+ .+..+|.+++
T Consensus 26 ~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~-~la~~~~I~s 103 (178)
T 3ga4_A 26 DNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVP-QLVKDLKLQN 103 (178)
T ss_dssp TTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCH-HHHHHTTCCS
T ss_pred HHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCH-HHHHHcCCCC
Confidence 34655454 3456789999999 49999999999999999987 46999999999887 8899999999
Q ss_pred CcEEEEEECCEEee---------EEEeccccccCCCCHHHHHHHHHHC
Q psy12938 553 LPAMLAYRGGEVVG---------NFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 553 lPtllvyk~G~~~~---------~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+|||++|++|.... ....+.=.-+.+++.+.|-+||.++
T Consensus 104 iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 104 VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 99999999996543 1111100012368889999999763
No 75
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=2.6e-12 Score=114.62 Aligned_cols=83 Identities=18% Similarity=0.306 Sum_probs=72.6
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
++|+||++||++|+.+.+.|.+++++|+ .++|++|+.+... .+..+|.+.++||+++|++|+. .++.|.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~G~~-~~~~G~------- 95 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQP-GLSGRFIINALPTIYHCKDGEF-RRYQGP------- 95 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEE-EECCSC-------
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCH-HHHHHcCCcccCEEEEEeCCeE-EEeecC-------
Confidence 8999999999999999999999999986 6999999998775 6889999999999999999994 555553
Q ss_pred CCHHHHHHHHHHCC
Q psy12938 579 YFVEDVEAFLVEAG 592 (612)
Q Consensus 579 ~~~~~lE~~L~~~g 592 (612)
.+.++|+.+|.++-
T Consensus 96 ~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 96 RTKKDFINFISDKE 109 (126)
T ss_dssp CCHHHHHHHHHTCG
T ss_pred CCHHHHHHHHHHHh
Confidence 34589999998653
No 76
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.33 E-value=3.3e-12 Score=113.28 Aligned_cols=87 Identities=9% Similarity=0.110 Sum_probs=65.1
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC------ceEEEecCCCc-hhchhhhCCCCCCcEEEEEECCEEeeEEE
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN------VKFVSVPLGCV-GDHFSATFKTSGLPAMLAYRGGEVVGNFV 569 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~------vkF~ki~~~~~-~d~~~~~~~i~~lPtllvyk~G~~~~~~v 569 (612)
+...++|.||++||++|+.|++ .++..|.. +.+++|+++.. +..++.+|.+.++|||++|++|+.+.+++
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~---~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~ 93 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDA---EIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLE 93 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHH---HTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHH---HHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeec
Confidence 4458999999999999999996 45555543 57788777643 23677899999999999999999999999
Q ss_pred eccccccCCCCHHHHHHHHH
Q psy12938 570 RLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 570 g~~~~~g~~~~~~~lE~~L~ 589 (612)
|+... +.+...|+.+|.
T Consensus 94 G~~~~---~~f~~~L~~~l~ 110 (116)
T 3dml_A 94 GYPGE---DFFWPMLARLIG 110 (116)
T ss_dssp CCCCH---HHHHHHHHHHHH
T ss_pred CCCCH---HHHHHHHHHHHh
Confidence 98555 334444444443
No 77
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.31 E-value=2.6e-12 Score=115.00 Aligned_cols=85 Identities=11% Similarity=0.144 Sum_probs=72.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE-eeEEEeccccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV-VGNFVRLGEEL 575 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~-~~~~vg~~~~~ 575 (612)
..+++|+||++||++|+.+.+.|++++++|++ ++|++|+.+... .+..+|.+.++||+++|++|.. +.++.|.
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~---- 109 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQ-SLGGQYGVQGFPTIKIFGANKNKPEDYQGG---- 109 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCH-HHHHHHTCCSSSEEEEESSCTTSCEECCSC----
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCH-HHHHHcCCCccCEEEEEeCCCCeEEEeecC----
Confidence 45899999999999999999999999999976 999999999775 7889999999999999998776 6655554
Q ss_pred cCCCCHHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLVE 590 (612)
Q Consensus 576 g~~~~~~~lE~~L~~ 590 (612)
.+.++|..+|.+
T Consensus 110 ---~~~~~l~~~l~~ 121 (130)
T 2dml_A 110 ---RTGEAIVDAALS 121 (130)
T ss_dssp ---CSHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHH
Confidence 234677777764
No 78
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.29 E-value=2.1e-12 Score=113.94 Aligned_cols=83 Identities=12% Similarity=0.241 Sum_probs=67.0
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCC----CchhchhhhCCCCCCcEEEEEECCEEeeEEEeccc
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLG----CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~----~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~ 573 (612)
.+++|+||++||++|+.+.+.|.++++++. .+.|+.++.. ... .+..+|.+.++||+++|++|+.+.++.|..
T Consensus 30 ~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~- 107 (118)
T 1zma_A 30 ETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQ-AFRSRYGIPTVPGFVHITDGQINVRCDSSM- 107 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHH-HHHHHHTCCSSCEEEEEETTEEEEECCTTC-
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHH-HHHHHcCCCCCCeEEEEECCEEEEEecCCC-
Confidence 479999999999999999999999999885 4666644432 122 466899999999999999999998877653
Q ss_pred cccCCCCHHHHHHHHH
Q psy12938 574 ELGEGYFVEDVEAFLV 589 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~ 589 (612)
+.++|+.||.
T Consensus 108 ------~~~~l~~~l~ 117 (118)
T 1zma_A 108 ------SAQEIKDFAG 117 (118)
T ss_dssp ------CHHHHHHHHT
T ss_pred ------CHHHHHHHhh
Confidence 3478888874
No 79
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.28 E-value=1.3e-11 Score=116.74 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=64.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCC---CCCCcEEEEEEC-CEEeeEEEe
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFK---TSGLPAMLAYRG-GEVVGNFVR 570 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~---i~~lPtllvyk~-G~~~~~~vg 570 (612)
+..+|||.||++||++|+.+.|.|++|+++|++++|++|+.+..+ .++.+|. +.++||+++|++ |+.+.++.+
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~~v~~d~~~-~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g~ 129 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELAIISKGRAE-DDLRQRLALERIAIPLVLVLDEEFNLLGRFVE 129 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEEEECHHHHH-HHTTTTTTCSSCCSSEEEEECTTCCEEEEEES
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEEEEECCCCH-HHHHHHHHcCCCCcCeEEEECCCCCEEEEEcC
Confidence 345899999999999999999999999999999999999988665 5667887 999999999998 588887744
No 80
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.27 E-value=3.4e-12 Score=115.61 Aligned_cols=86 Identities=14% Similarity=0.224 Sum_probs=74.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHH---HHHHhhcCCceEEEecCC----CchhchhhhCCCCCCcEEEEE-ECCEEe--eE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSL---AELSRSHTNVKFVSVPLG----CVGDHFSATFKTSGLPAMLAY-RGGEVV--GN 567 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~~~vkF~ki~~~----~~~d~~~~~~~i~~lPtllvy-k~G~~~--~~ 567 (612)
+.+|+|+||++||++|+.|.+.+ ..++++|+++.|++|+.+ ... .+..+|.+.++||+++| ++|+.+ .+
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~-~l~~~~~v~~~Pt~~~~d~~G~~v~~~~ 109 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANVTANDAQDV-ALLKHLNVLGLPTILFFDGQGQEHPQAR 109 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHH-HHHHHTTCCSSSEEEEECTTSCBCGGGC
T ss_pred CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHH-HHHHHcCCCCCCEEEEECCCCCEeeeee
Confidence 44799999999999999999999 999999999999999984 333 67789999999999999 999998 67
Q ss_pred EEeccccccCCCCHHHHHHHHHHC
Q psy12938 568 FVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 568 ~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
++|.... ++|+.+|.+.
T Consensus 110 ~~G~~~~-------~~l~~~l~~~ 126 (134)
T 2fwh_A 110 VTGFMDA-------ETFSAHLRDR 126 (134)
T ss_dssp BCSCCCH-------HHHHHHHHHC
T ss_pred eeeccCH-------HHHHHHHHhc
Confidence 8776444 8899988754
No 81
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.27 E-value=5.1e-12 Score=113.74 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=78.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHH--HHHhhc-CCceEEEecC---CCchhchhhhCCC---CCCcEEEEE-ECCEEeeE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLA--ELSRSH-TNVKFVSVPL---GCVGDHFSATFKT---SGLPAMLAY-RGGEVVGN 567 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~--~LA~~~-~~vkF~ki~~---~~~~d~~~~~~~i---~~lPtllvy-k~G~~~~~ 567 (612)
+.+|+|+||++||++|+.|.+.|. .++.+| .++.|++|+. +..+ .+..+|.+ .++||+++| ++|+.+.+
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~-~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~ 107 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNL-ELSQAYGDPIQDGIPAVVVVNSDGKVRYT 107 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSH-HHHHHTTCGGGGCSSEEEEECTTSCEEEE
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchH-HHHHHhCCccCCccceEEEECCCCCEEEE
Confidence 347999999999999999999999 999998 5799999999 7665 78899999 999999999 99999998
Q ss_pred EEeccccccCCCCHHHHHHHHHH
Q psy12938 568 FVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 568 ~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.|-.-..+...+.++++.||.+
T Consensus 108 ~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 108 TKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp CCSCTTTTGGGSCHHHHHHHHHH
T ss_pred ecCCcccccccCCHHHHHHHHHH
Confidence 87732222234667999999875
No 82
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=98.92 E-value=4.3e-13 Score=114.65 Aligned_cols=100 Identities=21% Similarity=0.353 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEE
Q psy12938 481 KQMYDRLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAY 559 (612)
Q Consensus 481 ~el~~~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvy 559 (612)
.+|....|.+.+.+ ...+++|.||++||+.|+.+.+.|.+++++|+ ++.|+.++.+..+ .+..+|.+.++||+++|
T Consensus 4 ~~l~~~~~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 4 IEVTDENFEQEVLK--SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENP-NTAAQYGIRSIPTLLLF 80 (106)
Confidence 44555556555533 34589999999999999999999999999997 6999999998765 67899999999999999
Q ss_pred ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 560 RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 560 k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++|+.+..+.|.... ++|+.+|.+
T Consensus 81 ~~g~~~~~~~g~~~~-------~~l~~~l~~ 104 (106)
T 2yj7_A 81 KNGQVVDRLVGAQPK-------EALKERIDK 104 (106)
Confidence 999999988876433 667776654
No 83
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.26 E-value=1.3e-11 Score=101.63 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=69.1
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
..+++.||++||+.|+.+.+.|++++++|+ +++|+.++.+..+ .+..+|++.++||+++ +|+. ++.|..
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~--~G~~--~~~G~~----- 72 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP-QKAMEYGIMAVPTIVI--NGDV--EFIGAP----- 72 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC-CTTTSTTTCCSSEEEE--TTEE--ECCSSS-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH-HHHHHCCCcccCEEEE--CCEE--eeecCC-----
Confidence 368999999999999999999999999998 7999999998765 6789999999999999 9987 555542
Q ss_pred CCCHHHHHHHHHH
Q psy12938 578 GYFVEDVEAFLVE 590 (612)
Q Consensus 578 ~~~~~~lE~~L~~ 590 (612)
+.++|+.+|.+
T Consensus 73 --~~~~l~~~l~~ 83 (85)
T 1fo5_A 73 --TKEALVEAIKK 83 (85)
T ss_dssp --SSHHHHHHHHH
T ss_pred --CHHHHHHHHHH
Confidence 34888888875
No 84
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.25 E-value=5.7e-12 Score=110.24 Aligned_cols=85 Identities=14% Similarity=0.307 Sum_probs=73.3
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcC----CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEe--eEEEecc
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHT----NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVV--GNFVRLG 572 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~----~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~--~~~vg~~ 572 (612)
.+++|+||++||+.|+.+.+.|.+++++|. .+.|++++.+..+ .+..+|.+.++||+++|++|+.+ ..+.|.
T Consensus 25 ~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~- 102 (120)
T 1mek_A 25 KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEES-DLAQQYGVRGYPTIKFFRNGDTASPKEYTAG- 102 (120)
T ss_dssp SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCC-SSHHHHTCCSSSEEEEEESSCSSSCEECCCC-
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCH-HHHHHCCCCcccEEEEEeCCCcCCcccccCc-
Confidence 479999999999999999999999999984 6999999998765 67899999999999999999977 655553
Q ss_pred ccccCCCCHHHHHHHHHHC
Q psy12938 573 EELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 573 ~~~g~~~~~~~lE~~L~~~ 591 (612)
.+.+.|..+|.++
T Consensus 103 ------~~~~~l~~~l~~~ 115 (120)
T 1mek_A 103 ------READDIVNWLKKR 115 (120)
T ss_dssp ------SSHHHHHHHHHTT
T ss_pred ------cCHHHHHHHHHhc
Confidence 3558899998754
No 85
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.25 E-value=8.1e-12 Score=122.06 Aligned_cols=95 Identities=16% Similarity=0.234 Sum_probs=79.8
Q ss_pred HHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE
Q psy12938 486 RLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV 564 (612)
Q Consensus 486 ~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~ 564 (612)
..|...+. ...+|+|+||++||++|+.+.+.|++++++|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.
T Consensus 105 ~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~ 180 (210)
T 3apq_A 105 REFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDR-MLCRMKGVNSYPSLFIFRSGMA 180 (210)
T ss_dssp HHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCH-HHHHHTTCCSSSEEEEECTTSC
T ss_pred HHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccH-HHHHHcCCCcCCeEEEEECCCc
Confidence 34555553 24489999999999999999999999999996 4999999999776 7889999999999999999999
Q ss_pred eeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 565 VGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 565 ~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+.++.|. .+.++|+.+|.++
T Consensus 181 ~~~~~G~-------~~~~~l~~~i~~~ 200 (210)
T 3apq_A 181 AVKYNGD-------RSKESLVAFAMQH 200 (210)
T ss_dssp CEECCSC-------CCHHHHHHHHHHH
T ss_pred eeEecCC-------CCHHHHHHHHHHh
Confidence 8877764 3458888888753
No 86
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.24 E-value=1.3e-11 Score=101.54 Aligned_cols=79 Identities=16% Similarity=0.255 Sum_probs=69.0
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
.+|+.||++||+.|+.+.+.|++++++|+ +++|+.++.+..+ .+..+|++.++||+++ +|+. ++.|...
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~----- 72 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDR-EKAIEYGLMAVPAIAI--NGVV--RFVGAPS----- 72 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCG-GGGGGTCSSCSSEEEE--TTTE--EEECSSC-----
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCH-HHHHhCCceeeCEEEE--CCEE--EEccCCC-----
Confidence 46899999999999999999999999998 7999999999775 7889999999999999 8887 6777533
Q ss_pred CCHHHHHHHHHH
Q psy12938 579 YFVEDVEAFLVE 590 (612)
Q Consensus 579 ~~~~~lE~~L~~ 590 (612)
.++|+.+|.+
T Consensus 73 --~~~l~~~l~~ 82 (85)
T 1nho_A 73 --REELFEAIND 82 (85)
T ss_dssp --CHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 3788888865
No 87
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.24 E-value=3.6e-11 Score=117.04 Aligned_cols=97 Identities=23% Similarity=0.339 Sum_probs=81.9
Q ss_pred CCCeEEEECCeecCC--CCHHHHHHHHhcCCCe-EEEEEeecCCCCc-------------hh------------hHHh--
Q psy12938 1 VNDQIIEVDGKSLVG--VTQEYAASVLRNTSGL-VRFLIGREKDPVN-------------SE------------VAQL-- 50 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~--~th~~av~~Lk~~~~~-v~l~v~r~~~~~~-------------~~------------i~~i-- 50 (612)
+||+|++|||.++.+ ++|.+++.+++.++.. +.|+|.|...... .. |..+
T Consensus 66 ~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~ 145 (206)
T 3r0h_A 66 IFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQ 145 (206)
T ss_dssp TTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECT
T ss_pred CCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECC
Confidence 589999999999999 9999999999998887 9999988643210 00 2222
Q ss_pred -----hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 -----IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 -----~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++.++++++++.+|+.+++.|.|+|.|...
T Consensus 146 gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~V~R~~~ 197 (206)
T 3r0h_A 146 GQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 197 (206)
T ss_dssp TSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEECC
T ss_pred CChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 23459999999999999999999999999999999999999999765
No 88
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.23 E-value=8.2e-12 Score=112.14 Aligned_cols=91 Identities=14% Similarity=0.255 Sum_probs=73.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~ 573 (612)
...+|+|+||++||++|+.|.+.|++++++|. .+.|++||.+... .+..+|.+.++||+++|++|..+..+. +
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~-~-- 99 (133)
T 2dj3_A 24 PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAND-ITNDQYKVEGFPTIYFAPSGDKKNPIK-F-- 99 (133)
T ss_dssp TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSC-CCCSSCCCSSSSEEEEECTTCTTSCEE-C--
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCH-HHHhhcCCCcCCEEEEEeCCCcccceE-e--
Confidence 35689999999999999999999999999985 6999999998764 667889999999999999987655321 1
Q ss_pred cccCCCCHHHHHHHHHHCC
Q psy12938 574 ELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~g 592 (612)
.|...+.++|..+|.++-
T Consensus 100 -~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 100 -EGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp -CSSCCSTTHHHHHHHHHS
T ss_pred -cCCCcCHHHHHHHHHHhc
Confidence 112245678999987753
No 89
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.21 E-value=3.3e-11 Score=118.32 Aligned_cols=83 Identities=14% Similarity=0.116 Sum_probs=74.1
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcC-----CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHT-----NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-----~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
+++|+||++||++|+.+.+.|..||.+|+ .++|++|+.+..+ .+..+|.+.++||+++|++|+.+..+.|....
T Consensus 136 ~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~ 214 (226)
T 1a8l_A 136 VRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYP-EWADQYNVMAVPKIVIQVNGEDRVEFEGAYPE 214 (226)
T ss_dssp EEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCH-HHHHHTTCCSSCEEEEEETTEEEEEEESCCCH
T ss_pred cEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCH-HHHHhCCCcccCeEEEEeCCceeEEEcCCCCH
Confidence 45999999999999999999999999997 8999999998765 68899999999999999999999988886443
Q ss_pred ccCCCCHHHHHHHHHH
Q psy12938 575 LGEGYFVEDVEAFLVE 590 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~ 590 (612)
++|+.+|.+
T Consensus 215 -------~~l~~~l~~ 223 (226)
T 1a8l_A 215 -------KMFLEKLLS 223 (226)
T ss_dssp -------HHHHHHHHH
T ss_pred -------HHHHHHHHH
Confidence 778888865
No 90
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.21 E-value=1.6e-11 Score=108.21 Aligned_cols=85 Identities=22% Similarity=0.327 Sum_probs=70.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC------CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE--eeEE
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT------NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV--VGNF 568 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~------~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~--~~~~ 568 (612)
...+|+|+||++||++|+.+.+.|++++++|+ .++|++||.+..+ +.. .+.++||+++|++|.. +.++
T Consensus 24 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~--~v~~~Pt~~~~~~~~~~~~~~~ 99 (121)
T 2djj_A 24 DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND--VPD--EIQGFPTIKLYPAGAKGQPVTY 99 (121)
T ss_dssp TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC--CSS--CCSSSSEEEEECSSCTTSCCCC
T ss_pred CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc--ccc--ccCcCCeEEEEeCcCCCCceEe
Confidence 45689999999999999999999999999996 5999999998663 433 9999999999999854 5555
Q ss_pred EeccccccCCCCHHHHHHHHHHCC
Q psy12938 569 VRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 569 vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
.|. .+.++|..||.++.
T Consensus 100 ~G~-------~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 100 SGS-------RTVEDLIKFIAENG 116 (121)
T ss_dssp CCC-------SCHHHHHHHHHHTS
T ss_pred cCC-------CCHHHHHHHHHhcc
Confidence 543 35689999998764
No 91
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.19 E-value=1.6e-12 Score=116.11 Aligned_cols=85 Identities=16% Similarity=0.323 Sum_probs=73.9
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
+.+++|+||++||+.|+.+.+.|.+++++|++++|+.|+.+..+ .+..+|.+.++||+++|++|+.+.++.|.
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~------ 108 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELK-EVAEKYNVEAMPTFLFIKDGAEADKVVGA------ 108 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCEECCTTTSG-GGHHHHTCCSSCCCCBCTTTTCCBCCCTT------
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEEEEeccchH-HHHHHcCCCccceEEEEeCCeEEEEEeCC------
Confidence 44799999999999999999999999999999999999999775 78899999999999999999998877663
Q ss_pred CCCHHHHHHHHHHC
Q psy12938 578 GYFVEDVEAFLVEA 591 (612)
Q Consensus 578 ~~~~~~lE~~L~~~ 591 (612)
..++|+.+|.++
T Consensus 109 --~~~~l~~~l~~~ 120 (130)
T 1wmj_A 109 --RKDDLQNTIVKH 120 (130)
T ss_dssp --CTTTHHHHHHHH
T ss_pred --CHHHHHHHHHHH
Confidence 225677777653
No 92
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.19 E-value=4e-11 Score=106.94 Aligned_cols=93 Identities=17% Similarity=0.277 Sum_probs=73.9
Q ss_pred HHHhhccCCCCceEEEEEeCC-------CChhhhhhHHHHHHHHhhcC-CceEEEecC-------CCchhchhhhCCCCC
Q psy12938 488 FLSEIDSEPRHITVIAHLSSP-------SLPACRALNSSLAELSRSHT-NVKFVSVPL-------GCVGDHFSATFKTSG 552 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~-------~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~-------~~~~d~~~~~~~i~~ 552 (612)
|...+.+. ...+|+|+||++ ||++|+.+.+.|.+++++|+ +++|++|+. +..+ .+..+|.+.+
T Consensus 15 ~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~-~~~~~~~i~~ 92 (123)
T 1wou_A 15 FHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNN-DFRKNLKVTA 92 (123)
T ss_dssp HHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTC-HHHHHHCCCS
T ss_pred HHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhH-HHHHHCCCCe
Confidence 44444432 356899999999 99999999999999999996 799999999 6554 6778899999
Q ss_pred CcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 553 LPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 553 lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+||+++|++| .+++|+. ....+.|+.||.+
T Consensus 93 ~Pt~~~~~~~---~~~~g~~-----~~~~~~l~~~i~~ 122 (123)
T 1wou_A 93 VPTLLKYGTP---QKLVESE-----CLQANLVEMLFSE 122 (123)
T ss_dssp SSEEEETTSS---CEEEGGG-----GGCHHHHHHHHHC
T ss_pred eCEEEEEcCC---ceEeccc-----cCCHHHHHHHHhc
Confidence 9999999984 4455542 2346788888863
No 93
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.19 E-value=2.4e-11 Score=116.93 Aligned_cols=99 Identities=31% Similarity=0.484 Sum_probs=79.0
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeecccc-----
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG----- 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~----- 378 (612)
.+++.+|+|.|+..||||+|.| |.+.+. ++.|+||..|.|||+|++.|+|++|| |||.++.++++.
T Consensus 3 ~~~~~~v~l~~~~~~lG~~i~~---g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 79 (196)
T 3gsl_A 3 SMEYEEITLERGNSGLGFSIAG---GTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEA 79 (196)
T ss_dssp CEEEEEEEEECBTTBSSEEEEC---CTTSCTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CcEEEEEEEEECCCCCCEEEEc---ccCCcccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3567789999999999999999 555432 46799999999999999999999999 788777553211
Q ss_pred -------------------------------------------cCCCCcccceEEEEeeccccccccCcceeccCC
Q psy12938 379 -------------------------------------------ADAGLEKLGIFVKTITEAGAAARDGRIQVRRGP 411 (612)
Q Consensus 379 -------------------------------------------~~~~~~~~~i~i~~i~~~~~a~~dg~l~~~~~~ 411 (612)
......+.|+||..|.++++|++.|+|+.||--
T Consensus 80 ~~~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~I 155 (196)
T 3gsl_A 80 LKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKI 155 (196)
T ss_dssp HHTSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred HHhCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEE
Confidence 011123468999999999999999999999853
No 94
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.19 E-value=1.2e-10 Score=111.94 Aligned_cols=97 Identities=29% Similarity=0.436 Sum_probs=81.5
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcCCCeEEEEEeecCCCCch--------------------------------hhH
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDPVNS--------------------------------EVA 48 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~~~~v~l~v~r~~~~~~~--------------------------------~i~ 48 (612)
+||+|++|||.++.+.+|.+++.+++.++..+.|+|.|....... .|.
T Consensus 56 ~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~v~l~~~~~~lG~~~~~~~~~~~~~~~~gv~V~ 135 (196)
T 3gsl_A 56 VNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVT 135 (196)
T ss_dssp TTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCCCEEEEEEEEEEBTTBSCEEEEESBTSCSBTTBCCEEEE
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCCccccEEEEEecCCCCceEEEEccCCCcCCCCCCCEEEE
Confidence 599999999999999999999999999999999999876422100 022
Q ss_pred Hh-------hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QL-------IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i-------~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.+ ..|+|++||+|++|||+++.++++++++.+|+.++..+.|+|.|...
T Consensus 136 ~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 136 KIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNTYDVVYLKVAKPSN 191 (196)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSCCEEEEEEEEEESC
T ss_pred EECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 22 23459999999999999999999999999999999999999998643
No 95
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.13 E-value=9.4e-11 Score=115.88 Aligned_cols=85 Identities=15% Similarity=0.293 Sum_probs=73.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC----ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN----VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~----vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~ 573 (612)
+.+|+|+||++||++|+.+.+.|.+|+++|.. +.|++||.+..+ .+..+|.+.++||+++|++|+.+. +.|.
T Consensus 32 ~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~-- 107 (241)
T 3idv_A 32 KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSAS-VLASRFDVSGYPTIKILKKGQAVD-YEGS-- 107 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEE-CCSC--
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCH-HHHHhcCCCcCCEEEEEcCCCccc-ccCc--
Confidence 45899999999999999999999999998753 999999999776 788999999999999999999773 4433
Q ss_pred cccCCCCHHHHHHHHHHC
Q psy12938 574 ELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~ 591 (612)
.+.++|..++.++
T Consensus 108 -----~~~~~l~~~i~~~ 120 (241)
T 3idv_A 108 -----RTQEEIVAKVREV 120 (241)
T ss_dssp -----SCHHHHHHHHHHH
T ss_pred -----ccHHHHHHHHhhc
Confidence 4558888888765
No 96
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.12 E-value=9.4e-11 Score=121.15 Aligned_cols=101 Identities=15% Similarity=0.235 Sum_probs=74.8
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCC--CchhchhhhCCCCCCcEEEEEECCE
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLG--CVGDHFSATFKTSGLPAMLAYRGGE 563 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~--~~~d~~~~~~~i~~lPtllvyk~G~ 563 (612)
.|.+.+.+ ...+|+|.||++||++|+.|.+.|+++|++|.. +.|+.|+.+ ..+ .+..+|.+.++||+++|++|+
T Consensus 26 ~f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~-~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 26 SFDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNK-ALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp HHHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTH-HHHHHTTCCBSSEEEEEECCC
T ss_pred HHHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCH-HHHHhCCCCccceEEEEECCc
Confidence 45555533 345799999999999999999999999999975 899999877 444 688999999999999999998
Q ss_pred EeeEEEe-----------ccccccCCCCHHHHHHHHHHC
Q psy12938 564 VVGNFVR-----------LGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 564 ~~~~~vg-----------~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+.+..| .....| ..+.+.|..||.+.
T Consensus 103 ~v~~~~g~~~~~~~~~~~~~~y~G-~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 103 IDLSKPIDNAKKSFSAHANEVYSG-ARTLAPIVDFSLSR 140 (298)
T ss_dssp C-------------CCCEEEECCS-CCSHHHHHHHHHTT
T ss_pred eeecccccccccccccccceeecC-CcCHHHHHHHHHHh
Confidence 6555444 112222 35678888888654
No 97
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.12 E-value=1.2e-10 Score=127.66 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=81.2
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEe
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVV 565 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~ 565 (612)
.|.+.+.+.....+++|+||++||++|+.|.+.|+.+|+++.. ++|++||.+..+ .+..+|.+.++||+++|++|+.+
T Consensus 10 ~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Ptl~~~~~g~~~ 88 (481)
T 3f8u_A 10 NFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANT-NTCNKYGVSGYPTLKIFRDGEEA 88 (481)
T ss_dssp THHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCH-HHHHHTTCCEESEEEEEETTEEE
T ss_pred HHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCH-HHHHhcCCCCCCEEEEEeCCcee
Confidence 4556664433346999999999999999999999999999976 999999999776 78899999999999999999888
Q ss_pred eEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 566 GNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 566 ~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
..+.|. .+.+.|..||.++
T Consensus 89 ~~~~G~-------~~~~~l~~~~~~~ 107 (481)
T 3f8u_A 89 GAYDGP-------RTADGIVSHLKKQ 107 (481)
T ss_dssp EECCSC-------SSHHHHHHHHHHH
T ss_pred eeecCc-------cCHHHHHHHHHhh
Confidence 777664 3447788887654
No 98
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.12 E-value=1.3e-10 Score=116.11 Aligned_cols=97 Identities=10% Similarity=0.124 Sum_probs=74.3
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC----CceEEEecC--CCchhchhhhCCCCCCcEEEEEEC
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT----NVKFVSVPL--GCVGDHFSATFKTSGLPAMLAYRG 561 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~----~vkF~ki~~--~~~~d~~~~~~~i~~lPtllvyk~ 561 (612)
|...+.+ ...+++|+||++||++|+.+.+.|++||++|+ .++|++|+. +... .+..+|.+.++||+++|++
T Consensus 22 f~~~i~~--~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~l~~~~~v~~~Pt~~~~~~ 98 (244)
T 3q6o_A 22 VRGAVLG--SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNS-AVCRDFNIPGFPTVRFFXA 98 (244)
T ss_dssp HHHHHSS--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTH-HHHHHTTCCSSSEEEEECT
T ss_pred HHHHHhh--CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhH-HHHHHcCCCccCEEEEEeC
Confidence 4444543 34689999999999999999999999999997 599999998 4454 7889999999999999999
Q ss_pred CEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 562 GEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 562 G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|...+.-..+ ...| .+.+.|+.+|.+
T Consensus 99 g~~~~~g~~~-~~~g--~~~~~l~~~i~~ 124 (244)
T 3q6o_A 99 FTXNGSGAVF-PVAG--ADVQTLRERLID 124 (244)
T ss_dssp TCCSSSCEEC-CCTT--CCHHHHHHHHHH
T ss_pred CCcCCCCeeE-ecCC--CCHHHHHHHHHH
Confidence 8776532222 2223 356777776654
No 99
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.09 E-value=3.7e-11 Score=111.75 Aligned_cols=92 Identities=11% Similarity=0.026 Sum_probs=67.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHh--hcCCceEEEecCCCchhchhhhCCCCCCcEEEEEE-CCEEeeEEEecccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSR--SHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYR-GGEVVGNFVRLGEE 574 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~--~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk-~G~~~~~~vg~~~~ 574 (612)
+.+|+|+||++||++|+.|.+.+..++. ++.+..|+.|+++.........|.+.++||+++|+ +|+.+.+++|....
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~ 123 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSN 123 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTT
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCC
Confidence 3489999999999999999999987532 33345788887752222466889999999999999 99999999987222
Q ss_pred ccCCCCHHHHHHHHH
Q psy12938 575 LGEGYFVEDVEAFLV 589 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~ 589 (612)
-.--++.++++.+|.
T Consensus 124 ~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 124 RLYTYEPRDLPLLIE 138 (151)
T ss_dssp STTCCCGGGHHHHHH
T ss_pred cccccchhhHHHHHH
Confidence 111244455555554
No 100
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.09 E-value=1.7e-10 Score=114.07 Aligned_cols=83 Identities=13% Similarity=0.303 Sum_probs=72.6
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhc----CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSH----TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~----~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
.++|+||++||++|+.|.+.|..+|++| +.++|++|+.+..+ .+..+|.+.++||+++|++|+.+. +.|
T Consensus 149 ~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~~~-~~g----- 221 (241)
T 3idv_A 149 IILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAET-DLAKRFDVSGYPTLKIFRKGRPYD-YNG----- 221 (241)
T ss_dssp EEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCH-HHHHHTTCCSSSEEEEEETTEEEE-CCS-----
T ss_pred eEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCH-HHHHHcCCcccCEEEEEECCeEEE-ecC-----
Confidence 7999999999999999999999999886 45999999999776 788999999999999999998765 433
Q ss_pred cCCCCHHHHHHHHHHC
Q psy12938 576 GEGYFVEDVEAFLVEA 591 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~ 591 (612)
..+.++|..||.++
T Consensus 222 --~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 222 --PREKYGIVDYMIEQ 235 (241)
T ss_dssp --CCSHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHhh
Confidence 34668999999865
No 101
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.09 E-value=1.4e-10 Score=103.46 Aligned_cols=85 Identities=11% Similarity=0.133 Sum_probs=71.6
Q ss_pred ceEEEEEeCCCChhhhhhHHHH---HHHHhhc-CCceEEEecCCC--chhchhhhCCCCCCcEEEEE-ECCEEeeEEEec
Q psy12938 499 ITVIAHLSSPSLPACRALNSSL---AELSRSH-TNVKFVSVPLGC--VGDHFSATFKTSGLPAMLAY-RGGEVVGNFVRL 571 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~-~~vkF~ki~~~~--~~d~~~~~~~i~~lPtllvy-k~G~~~~~~vg~ 571 (612)
.+|+|.||++||++|+.+.+.| +.+++.+ ..+.|++|+.+. .. .+..+|.+.++||+++| ++|+.+.++.|.
T Consensus 28 k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~-~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~ 106 (130)
T 2kuc_A 28 KLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGV-ELRKKYGVHAYPTLLFINSSGEVVYRLVGA 106 (130)
T ss_dssp SCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHH-HHHHHTTCCSSCEEEEECTTSCEEEEEESC
T ss_pred CeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchH-HHHHHcCCCCCCEEEEECCCCcEEEEecCC
Confidence 4799999999999999999999 7777665 368899999873 33 67899999999999999 899999998886
Q ss_pred cccccCCCCHHHHHHHHHHC
Q psy12938 572 GEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 572 ~~~~g~~~~~~~lE~~L~~~ 591 (612)
.. .++|+.+|.++
T Consensus 107 ~~-------~~~l~~~l~~~ 119 (130)
T 2kuc_A 107 ED-------APELLKKVKLG 119 (130)
T ss_dssp CC-------HHHHHHHHHHH
T ss_pred CC-------HHHHHHHHHHH
Confidence 43 37888888764
No 102
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.08 E-value=2.5e-10 Score=131.62 Aligned_cols=99 Identities=32% Similarity=0.493 Sum_probs=80.4
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccccc----
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVGA---- 379 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~~---- 379 (612)
..+.++|.|.|+..||||+|.| |.+.+. ++.|+||..|.+||+|+++|+|++|| |||.++.+++|..
T Consensus 57 ~~~~~~v~l~k~~~glGf~i~g---g~~~~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 133 (721)
T 2xkx_A 57 EMEYEEITLERGNSGLGFSIAG---GTDNPHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEA 133 (721)
T ss_pred CceEEEEEEEeCCCCCCEEEeC---CcCCcccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3466789999999999999999 555432 46799999999999999999999999 8998887753311
Q ss_pred --------------C------------------------------CCCcccceEEEEeeccccccccCcceeccCC
Q psy12938 380 --------------D------------------------------AGLEKLGIFVKTITEAGAAARDGRIQVRRGP 411 (612)
Q Consensus 380 --------------~------------------------------~~~~~~~i~i~~i~~~~~a~~dg~l~~~~~~ 411 (612)
. +.++..|+||+.|.+|++|+++|+|+.||--
T Consensus 134 l~~~g~~v~l~v~R~~~~~~~~~~v~l~k~~~~lG~~i~~~~~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~I 209 (721)
T 2xkx_A 134 LKEAGSIVRLYVMRRKPPAEKVMEIKLIKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKI 209 (721)
T ss_pred hhccccccceEEEecccccccceeeeeeeecCCCceeeccCCCccccCCCCceEEEEeCCCCchhhcCCCCCCCEE
Confidence 0 0122578999999999999999999999853
No 103
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.07 E-value=1.9e-10 Score=104.15 Aligned_cols=85 Identities=13% Similarity=0.204 Sum_probs=70.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCC--CcEEEEEEC--CEEeeEEEecc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSG--LPAMLAYRG--GEVVGNFVRLG 572 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~--lPtllvyk~--G~~~~~~vg~~ 572 (612)
..+|+|.||++ |.+|+.|.+.|+++|++|. .++|+++|++..+ .++..|.++. +|||++|++ |+. ..+.
T Consensus 23 ~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~-~~a~~~gi~~~~iPtl~i~~~~~g~~-~~~~--- 96 (133)
T 2djk_A 23 GIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFG-AHAGNLNLKTDKFPAFAIQEVAKNQK-FPFD--- 96 (133)
T ss_dssp TSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTG-GGTTTTTCCSSSSSEEEEECTTTCCB-CCCC---
T ss_pred CCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhH-HHHHHcCCCcccCCEEEEEecCcCcc-cCCC---
Confidence 45799999999 7999999999999999995 6999999999887 6889999999 999999998 665 3333
Q ss_pred ccccCCCCHHHHHHHHHH
Q psy12938 573 EELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 573 ~~~g~~~~~~~lE~~L~~ 590 (612)
....++.+.|+.||.+
T Consensus 97 --~~g~~~~~~l~~fi~~ 112 (133)
T 2djk_A 97 --QEKEITFEAIKAFVDD 112 (133)
T ss_dssp --SSSCCCHHHHHHHHHH
T ss_pred --CccccCHHHHHHHHHH
Confidence 0123566889998875
No 104
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.06 E-value=2.1e-10 Score=100.20 Aligned_cols=78 Identities=12% Similarity=0.172 Sum_probs=67.3
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
..+|+.||++||++|+.+.+.|+++++++. +.|.+||++..+ .+.++|.++ +|+|++|+||+.+. .| .
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~~vDId~d~-~l~~~ygv~-VP~l~~~~dG~~v~--~g-------~ 96 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW-FELEVINIDGNE-HLTRLYNDR-VPVLFAVNEDKELC--HY-------F 96 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCEEEETTTCH-HHHHHSTTS-CSEEEETTTTEEEE--CS-------S
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEEEEECCCCH-HHHHHhCCC-CceEEEEECCEEEE--ec-------C
Confidence 367999999999999999999999999986 999999999776 788899997 99999999999872 22 2
Q ss_pred CCHHHHHHHH
Q psy12938 579 YFVEDVEAFL 588 (612)
Q Consensus 579 ~~~~~lE~~L 588 (612)
|..+.|+++|
T Consensus 97 ~~~~~L~~~L 106 (107)
T 2fgx_A 97 LDSDVIGAYL 106 (107)
T ss_dssp CCCHHHHHHH
T ss_pred CCHHHHHHHh
Confidence 5558888887
No 105
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.05 E-value=6.5e-10 Score=99.22 Aligned_cols=85 Identities=18% Similarity=0.264 Sum_probs=73.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC----------------------chhchhhhCCCCCCcE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC----------------------VGDHFSATFKTSGLPA 555 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~----------------------~~d~~~~~~~i~~lPt 555 (612)
+.+++|+||++||+.|+.+.+.|.+++++|++++|+.|+.+. .. .+...|.+.++|+
T Consensus 24 ~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~~P~ 102 (136)
T 1lu4_A 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADG-VIWARYNVPWQPA 102 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTS-HHHHHTTCCSSSE
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCch-hHHHhcCCCCCCE
Confidence 458999999999999999999999999999999999998765 33 5778899999999
Q ss_pred EEEE-ECCEEeeEEE---eccccccCCCCHHHHHHHHHHC
Q psy12938 556 MLAY-RGGEVVGNFV---RLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 556 llvy-k~G~~~~~~v---g~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+++| ++|+++ .+. |. .+.++|+.+|.+.
T Consensus 103 ~~lid~~G~i~-~~~~~~g~-------~~~~~l~~~l~~l 134 (136)
T 1lu4_A 103 FVFYRADGTST-FVNNPTAA-------MSQDELSGRVAAL 134 (136)
T ss_dssp EEEECTTSCEE-EECCSSSC-------CCHHHHHHHHHHC
T ss_pred EEEECCCCcEE-EEEcCCCc-------cCHHHHHHHHHHH
Confidence 9999 799998 777 44 3458898888763
No 106
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.62 E-value=2.1e-11 Score=109.17 Aligned_cols=85 Identities=18% Similarity=0.275 Sum_probs=70.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHH---HHHHhhcCC-ceEEEecCC--CchhchhhhCCCCCCcEEEEE--ECCEE--eeE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSL---AELSRSHTN-VKFVSVPLG--CVGDHFSATFKTSGLPAMLAY--RGGEV--VGN 567 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~~~-vkF~ki~~~--~~~d~~~~~~~i~~lPtllvy--k~G~~--~~~ 567 (612)
..+|+|+||++||++|+.|.+.| +.+++.+.. +.|+.|+.+ ... .+...|.+.++||+++| ++|+. +.+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~-~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~ 97 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQ-ELARRYRVPGTPTFVFLVPKAGAWEEVGR 97 (130)
Confidence 45899999999999999999999 999998865 999999884 333 67799999999999999 89999 888
Q ss_pred EEeccccccCCCCHHHHHHHHHH
Q psy12938 568 FVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 568 ~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.|.... +.|..+|.+
T Consensus 98 ~~G~~~~-------~~l~~~l~~ 113 (130)
T 2lst_A 98 LFGSRPR-------AEFLKELRQ 113 (130)
Confidence 8886443 455555543
No 107
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.04 E-value=3.9e-10 Score=120.34 Aligned_cols=85 Identities=13% Similarity=0.205 Sum_probs=72.8
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcC-------CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeE-EEe
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHT-------NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGN-FVR 570 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-------~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~-~vg 570 (612)
.+|+|+||++||++|+.|.+.++++|+++. .++|++||.+... .+..+|.+.++||+++|++|+.+.+ +.|
T Consensus 23 ~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~-~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G 101 (382)
T 2r2j_A 23 DVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHS-DIAQRYRISKYPTLKLFRNGMMMKREYRG 101 (382)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCH-HHHHHTTCCEESEEEEEETTEEEEEECCS
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccH-HHHHhcCCCcCCEEEEEeCCcEeeeeecC
Confidence 489999999999999999999999998872 3999999999776 7889999999999999999998763 544
Q ss_pred ccccccCCCCHHHHHHHHHHC
Q psy12938 571 LGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 571 ~~~~~g~~~~~~~lE~~L~~~ 591 (612)
. .+.+.|..||.++
T Consensus 102 ~-------~~~~~l~~~i~~~ 115 (382)
T 2r2j_A 102 Q-------RSVKALADYIRQQ 115 (382)
T ss_dssp C-------CSHHHHHHHHHHH
T ss_pred c-------chHHHHHHHHHHh
Confidence 3 3458888888764
No 108
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.04 E-value=3.8e-10 Score=91.20 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=61.6
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCC
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGY 579 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~ 579 (612)
+.|+||++||++|+.+.+.|++++++|. .++|++|+ .+ .+..+|++.++||+++ +|+.+.. |.. .
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~-~~~~~~~v~~~Pt~~~--~G~~~~~--G~~------~ 67 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EM-DQILEAGLTALPGLAV--DGELKIM--GRV------A 67 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SH-HHHHHHTCSSSSCEEE--TTEEEEC--SSC------C
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CH-HHHHHCCCCcCCEEEE--CCEEEEc--CCC------C
Confidence 4689999999999999999999999997 79999998 22 6789999999999999 9998764 431 1
Q ss_pred CHHHHHHHH
Q psy12938 580 FVEDVEAFL 588 (612)
Q Consensus 580 ~~~~lE~~L 588 (612)
+.++|+.+|
T Consensus 68 ~~~~l~~~l 76 (77)
T 1ilo_A 68 SKEEIKKIL 76 (77)
T ss_dssp CHHHHHHHC
T ss_pred CHHHHHHHh
Confidence 457777765
No 109
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.03 E-value=9.5e-10 Score=107.84 Aligned_cols=74 Identities=14% Similarity=0.200 Sum_probs=65.8
Q ss_pred CCceEEEEEeCC-CChhhhhhHHHHHHHHhhcCCceEEEecCCC--chhchhhhCCCCCCcEEEEEECCEEe-eEEEec
Q psy12938 497 RHITVIAHLSSP-SLPACRALNSSLAELSRSHTNVKFVSVPLGC--VGDHFSATFKTSGLPAMLAYRGGEVV-GNFVRL 571 (612)
Q Consensus 497 ~~~~Vvvhfy~~-~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~--~~d~~~~~~~i~~lPtllvyk~G~~~-~~~vg~ 571 (612)
....+++.||++ ||++|+.|.+.|++||+.++.++|++||.+. .+ .++.+|.+.++||+++|++|+.. .++.|.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~-~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~ 98 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGK-ELAKRYRIDRAPATTITQDGKDFGVRYFGL 98 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHH-HHHHHTTCCSSSEEEEEETTBCCSEEEESC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccH-HHHHHcCCCcCceEEEEcCCceeeEEEecc
Confidence 344678999999 9999999999999999888899999999987 65 78899999999999999999875 667775
No 110
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.02 E-value=2e-09 Score=104.32 Aligned_cols=96 Identities=25% Similarity=0.368 Sum_probs=79.7
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcCCCeEEEEEeecCCC-----C----ch--------------------------
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDP-----V----NS-------------------------- 45 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~~~~v~l~v~r~~~~-----~----~~-------------------------- 45 (612)
+||+|++|||.++.+.+|.+++.+|+.++..|.|+|.|+.++ . ..
T Consensus 54 ~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~g~~~~~~~~~v~l~~~~~~lG~~l~~g~~~~~~~ 133 (200)
T 2qt5_A 54 VGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYELPPVSIQGSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNK 133 (200)
T ss_dssp TTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEECCCCCCCCSSEEEEEEEEEEECBTTBCSEEEEEECCSSTTT
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEeccCCCcccCCCccceeEEEEEEecCCCCeEEEEECCCCCCccC
Confidence 599999999999999999999999999999999999875421 0 00
Q ss_pred h----hHHh-------hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 46 E----VAQL-------IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 46 ~----i~~i-------~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
. |..+ ..|+|++||+|++|||..+.+++++++..+|+..+..|.|+|.|..
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEATLLIEYDV 195 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 0 1111 2235999999999999999999999999999998889999999864
No 111
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.02 E-value=1.5e-10 Score=112.55 Aligned_cols=99 Identities=16% Similarity=0.200 Sum_probs=78.1
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeee--ccccc------
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIG--MGVGA------ 379 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g--~~~~~------ 379 (612)
+.+.|+|.|+..||||+|.| |.+...+ .|+||..|.+||+|+++|+|+.|| |||.++.+ ++|..
T Consensus 18 ~~~~v~~~~~~~~lG~~i~~---g~~~~~~-~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~ 93 (206)
T 3r0h_A 18 KKILIELKVEKKPMGVIVCG---GKNNHVT-TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFH 93 (206)
T ss_dssp SCEEEEEECTTSCCCEEEEC---CSSSSCC-SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHH
T ss_pred CEEEEEEEeCCCCcCEEEec---ccCCCCC-CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHH
Confidence 45669999999999999999 6654332 589999999999999999999999 89998887 43210
Q ss_pred ----C-----------------------CC---------CcccceEEEEeeccccccccCcceeccCCccc
Q psy12938 380 ----D-----------------------AG---------LEKLGIFVKTITEAGAAARDGRIQVRRGPKGV 414 (612)
Q Consensus 380 ----~-----------------------~~---------~~~~~i~i~~i~~~~~a~~dg~l~~~~~~~gv 414 (612)
. .. ....|+||.+|.+|++|++.|+|+.||--..|
T Consensus 94 ~~~~~~v~l~v~R~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~V 164 (206)
T 3r0h_A 94 TTYEKAVTLTVFRADPPELEKFNVDLMKKAGKELGLSLSPNEIGCTIADLIQGQYPEIDSKLQRGDIITKF 164 (206)
T ss_dssp SCCSSEEEEEEECCSSCCEEEEEEEEECCTTCCCCEEEEECSSCEEEEEECTTSCHHHHHHCCTTCEEEEE
T ss_pred hcCCCceEEEEEecccCCCcEEEEEEecCCCCccCeEEEcCCceEEEEEECCCChHHHcCCCCCCCEEEEE
Confidence 0 00 11357899999999999999999999964433
No 112
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.00 E-value=2e-10 Score=108.07 Aligned_cols=86 Identities=12% Similarity=0.196 Sum_probs=65.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHH---HHHHhhcC-CceEEEecCCCchhch--------------------------hhh
Q psy12938 498 HITVIAHLSSPSLPACRALNSSL---AELSRSHT-NVKFVSVPLGCVGDHF--------------------------SAT 547 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~~-~vkF~ki~~~~~~d~~--------------------------~~~ 547 (612)
+.+|+|+||++||++|+.|.+.+ ..+++.+. ++.|++|+.+... .+ ...
T Consensus 47 gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (172)
T 3f9u_A 47 NKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKT-PLTEPVKIMENGTERTLRTVGDKWSYLQRVK 125 (172)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCC-EEEEEEEEEETTEEEEEEEHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCccc-ccchhhhhhhcchhhhhhhhhhhhhHHHHHH
Confidence 45899999999999999985444 55555454 5899999987542 22 578
Q ss_pred CCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 548 FKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 548 ~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|.+.++||+++| ++|+.+.++.|... +.+++..+|.+
T Consensus 126 ~~v~~~Pt~~lid~~G~~~~~~~G~~~------~~~~l~~~l~~ 163 (172)
T 3f9u_A 126 FGANAQPFYVLIDNEGNPLNKSYAYDE------DISKYINFLQT 163 (172)
T ss_dssp HSCCCSSEEEEECTTSCBSSCCBCSCC------CHHHHHHHHHH
T ss_pred cCCCCcceEEEECCCCCEEeeccCCCC------CHHHHHHHHHH
Confidence 999999999999 99999998887743 13566666543
No 113
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.99 E-value=1.5e-09 Score=98.10 Aligned_cols=85 Identities=14% Similarity=0.201 Sum_probs=71.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCC---------------------------CchhchhhhCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLG---------------------------CVGDHFSATFK 549 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~---------------------------~~~d~~~~~~~ 549 (612)
+.+++|.||++||+.|+.+.+.|.+++++|++ ++|+.|+.+ ... .+...|.
T Consensus 29 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 107 (148)
T 2b5x_A 29 EKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDH-ALTDAFE 107 (148)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSC-HHHHHTC
T ss_pred CCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCch-hHHHHhC
Confidence 45899999999999999999999999999976 999999853 222 5678999
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++|+++++ ++|+.+..+.|... .++|+.+|.+
T Consensus 108 v~~~P~~~lid~~G~i~~~~~g~~~-------~~~l~~~l~~ 142 (148)
T 2b5x_A 108 NEYVPAYYVFDKTGQLRHFQAGGSG-------MKMLEKRVNR 142 (148)
T ss_dssp CCCSSEEEEECTTCBEEEEEESCST-------THHHHHHHHH
T ss_pred CCCCCEEEEECCCCcEEEEecCCCC-------HHHHHHHHHH
Confidence 9999999999 89999998888632 3667777654
No 114
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.99 E-value=1e-09 Score=98.82 Aligned_cols=84 Identities=18% Similarity=0.304 Sum_probs=72.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCC-------------------------chhchhhhCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGC-------------------------VGDHFSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~-------------------------~~d~~~~~~~ 549 (612)
++.+++|+||++||+.|+.+.+.|.+++++|+ ++.|+.|+.+. .. .+...|.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKG-ELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSS-HHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCch-hHHHhcC
Confidence 45689999999999999999999999999997 79999998742 22 5778999
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHH
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFL 588 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L 588 (612)
+..+|+++++ ++|+++..+.|... .++|+.+|
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~-------~~~l~~~l 144 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMT-------AEQLKEWT 144 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCC-------HHHHHHHH
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcC-------HHHHHHhh
Confidence 9999999999 99999999888643 37787776
No 115
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.99 E-value=1.8e-09 Score=96.06 Aligned_cols=84 Identities=19% Similarity=0.207 Sum_probs=71.5
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC-----------------------chhchhhhCCCCCCc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC-----------------------VGDHFSATFKTSGLP 554 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~-----------------------~~d~~~~~~~i~~lP 554 (612)
+.+++++||++||+.|+.+.+.|.+++++|++++|+.|+.+. .. .+...|.+.++|
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~~P 103 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDG-SVWANFGVTQQP 103 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTC-HHHHHTTCCSSS
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCc-HHHHHcCCCCCc
Confidence 458999999999999999999999999999999999998742 22 567899999999
Q ss_pred EEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 555 AMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 555 tllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++++| ++|+.+ .+.|... .++|+.+|.+
T Consensus 104 ~~~~id~~g~i~-~~~g~~~-------~~~l~~~l~~ 132 (136)
T 1zzo_A 104 AYAFVDPHGNVD-VVRGRMS-------QDELTRRVTA 132 (136)
T ss_dssp EEEEECTTCCEE-EEESCCC-------HHHHHHHHHH
T ss_pred eEEEECCCCCEE-EEecCCC-------HHHHHHHHHH
Confidence 99999 699998 8877633 4788888765
No 116
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.98 E-value=8.1e-10 Score=122.00 Aligned_cols=86 Identities=13% Similarity=0.299 Sum_probs=73.8
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE--eeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV--VGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~--~~~~vg~~~ 573 (612)
..+++|+||++||++|+.|.+.++++|+++. +++|++||.+..+ .+..+|.+.++||+++|++|+. +..+.|.
T Consensus 31 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~-- 107 (504)
T 2b5e_A 31 HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQ-DLCMEHNIPGFPSLKIFKNSDVNNSIDYEGP-- 107 (504)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEETTCTTCEEECCSC--
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCH-HHHHhcCCCcCCEEEEEeCCccccceeecCC--
Confidence 4589999999999999999999999999997 4999999999776 7889999999999999999986 5555553
Q ss_pred cccCCCCHHHHHHHHHHC
Q psy12938 574 ELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~ 591 (612)
.+.+.|..||.++
T Consensus 108 -----~~~~~l~~~l~~~ 120 (504)
T 2b5e_A 108 -----RTAEAIVQFMIKQ 120 (504)
T ss_dssp -----CSHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHh
Confidence 3457788887654
No 117
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.98 E-value=4.4e-10 Score=95.58 Aligned_cols=61 Identities=23% Similarity=0.184 Sum_probs=53.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVGA 379 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~~ 379 (612)
.+...|+|.|...+|||+|.+. +...+||++|.+||+|+++|+|++|| |||.++.|++|.+
T Consensus 4 g~~k~V~l~K~~~~LG~tI~~~--------g~g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~e 68 (95)
T 3gge_A 4 GIEKEVNVYKSEDSLGLTITDN--------GVGYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD 68 (95)
T ss_dssp EEEEEEEEECCSSCCCEEEECS--------SSSCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHH
T ss_pred CeEEEEEEEECCCCceEEEEcC--------CCCcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHH
Confidence 3556799999999999999982 12358999999999999999999999 9999999998854
No 118
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.98 E-value=8e-10 Score=102.53 Aligned_cols=86 Identities=12% Similarity=0.159 Sum_probs=70.0
Q ss_pred ceEEEEEe-CCCChhhhhhHHHH---HHHHhhc-CCceEEEecCCCch----------hchhhhCCCCCCcEEEEE-ECC
Q psy12938 499 ITVIAHLS-SPSLPACRALNSSL---AELSRSH-TNVKFVSVPLGCVG----------DHFSATFKTSGLPAMLAY-RGG 562 (612)
Q Consensus 499 ~~Vvvhfy-~~~~~~C~~m~~~l---~~LA~~~-~~vkF~ki~~~~~~----------d~~~~~~~i~~lPtllvy-k~G 562 (612)
.+|+|.|| ++||++|+.+.+.| .++++.+ .++.|++|+.+... ..+...|.+.++||+++| ++|
T Consensus 48 k~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G 127 (154)
T 2ju5_A 48 KPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEG 127 (154)
T ss_dssp CCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTC
T ss_pred CeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCC
Confidence 47999999 99999999999999 7887766 57999999987531 256789999999999999 899
Q ss_pred EEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 563 EVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 563 ~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.+.++ |+. ....+.+..+|.+
T Consensus 128 ~~~~~~-G~~-----~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 128 KQLARM-GFE-----PGGGAAYVSKVKS 149 (154)
T ss_dssp CEEEEE-CCC-----TTCHHHHHHHHHH
T ss_pred CEEEEe-cCC-----CCCHHHHHHHHHH
Confidence 999988 874 1234667777654
No 119
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.97 E-value=7.1e-10 Score=96.66 Aligned_cols=73 Identities=8% Similarity=0.084 Sum_probs=57.6
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC----CchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG----CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~----~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
.+||.||++||++|+.|.+.|+++|++|+ ++.++.+ ..+ .+..+|.+.++||+++ +|+. +.|..
T Consensus 14 ~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v~~~~~~~~~~~~-~l~~~~~V~~~PT~~i--~G~~---~~G~~--- 81 (106)
T 3kp8_A 14 IGGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQA-QECTEAGITSYPTWII--NGRT---YTGVR--- 81 (106)
T ss_dssp HTCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCTTCTTSCCC-HHHHHTTCCSSSEEEE--TTEE---EESCC---
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHhCC---EEEEecccccchhH-HHHHHcCCeEeCEEEE--CCEE---ecCCC---
Confidence 46899999999999999999999998886 6666643 233 6789999999999877 9974 55543
Q ss_pred cCCCCHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFL 588 (612)
Q Consensus 576 g~~~~~~~lE~~L 588 (612)
+.++|..++
T Consensus 82 ----~~~~l~~~~ 90 (106)
T 3kp8_A 82 ----SLEALAVAS 90 (106)
T ss_dssp ----CHHHHHHHH
T ss_pred ----CHHHHHHHh
Confidence 347777776
No 120
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.96 E-value=3.8e-09 Score=102.31 Aligned_cols=44 Identities=27% Similarity=0.339 Sum_probs=40.9
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
.|+|++||+|++|||.++.+++|.+++.+++.++..|.|+|.|.
T Consensus 49 aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 92 (200)
T 2qt5_A 49 SDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERVVLEVEYE 92 (200)
T ss_dssp TTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEE
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEecc
Confidence 34799999999999999999999999999999999999999875
No 121
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.96 E-value=6.1e-10 Score=93.69 Aligned_cols=73 Identities=15% Similarity=0.206 Sum_probs=62.7
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCCCH
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFV 581 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~ 581 (612)
|+.||++||++|+.+.+.|++++.+| |.+||++..+ .+.++|.++ +|++++ +||+.++ | .|..
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~----~~~vdid~~~-~l~~~~g~~-vPtl~~-~~G~~v~---g-------~~~~ 65 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA----FFSVFIDDDA-ALESAYGLR-VPVLRD-PMGRELD---W-------PFDA 65 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC----EEEEECTTCH-HHHHHHTTT-CSEEEC-TTCCEEE---S-------CCCH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh----eEEEECCCCH-HHHHHhCCC-cCeEEE-ECCEEEe---C-------CCCH
Confidence 67899999999999999999998776 7899999776 788999998 999999 9999874 2 2566
Q ss_pred HHHHHHHHHC
Q psy12938 582 EDVEAFLVEA 591 (612)
Q Consensus 582 ~~lE~~L~~~ 591 (612)
+.|+++|.++
T Consensus 66 ~~L~~~l~~~ 75 (87)
T 1ttz_A 66 PRLRAWLDAA 75 (87)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 8999999754
No 122
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.95 E-value=8.2e-10 Score=116.31 Aligned_cols=92 Identities=10% Similarity=0.107 Sum_probs=72.2
Q ss_pred HHHHhhccCCCCceEEEEEeCCCChhhhhhHHH-------HHHHHhhcC--CceEEEecCCCchhchhhhCCCCCCcEEE
Q psy12938 487 LFLSEIDSEPRHITVIAHLSSPSLPACRALNSS-------LAELSRSHT--NVKFVSVPLGCVGDHFSATFKTSGLPAML 557 (612)
Q Consensus 487 ~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~-------l~~LA~~~~--~vkF~ki~~~~~~d~~~~~~~i~~lPtll 557 (612)
.|.+.+.+ ..+|+|+|||+||+ |+.+.|. ++++|+.+. .++|++||.+..+ .+..+|.+.++||++
T Consensus 20 ~f~~~i~~---~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~-~l~~~~~v~~~Pt~~ 94 (350)
T 1sji_A 20 NFKQVLKK---YDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEA-KLAKKLGFDEEGSLY 94 (350)
T ss_dssp HHHHHHTT---CSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTH-HHHHHHTCCSTTEEE
T ss_pred HHHHHHhh---CCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCH-HHHHhcCCCccceEE
Confidence 34444532 45899999999999 9988777 999999875 5999999999776 788999999999999
Q ss_pred EEECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 558 AYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 558 vyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+|++|+ ...+.|. .+.+.|..||.++
T Consensus 95 ~~~~g~-~~~~~G~-------~~~~~l~~~i~~~ 120 (350)
T 1sji_A 95 VLKGDR-TIEFDGE-------FAADVLVEFLLDL 120 (350)
T ss_dssp EEETTE-EEEECSC-------CCHHHHHHHHHTT
T ss_pred EEECCc-EEEecCC-------CCHHHHHHHHHHh
Confidence 999999 3445553 3446677776543
No 123
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.95 E-value=7.7e-10 Score=96.99 Aligned_cols=88 Identities=17% Similarity=0.230 Sum_probs=66.3
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch----hchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG----DHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~----d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
.|++ ||++||++|+.+.+.|+.++.+| .|+.|+.+... ..+...|.+..+||+ |.+|+.++.+.|+.+..
T Consensus 21 ~vv~-f~a~~C~~C~~~~~~l~~~~~~~---~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~~~~~~~~~~ 94 (116)
T 2e7p_A 21 PVVV-FSKTYCGYCNRVKQLLTQVGASY---KVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIGGCDTVVEKH 94 (116)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEECHHHHHHHH
T ss_pred CEEE-EECCCChhHHHHHHHHHHcCCCe---EEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEECChHHHHHHH
Confidence 4666 99999999999999999997765 78888876431 257788999999999 77999988776664221
Q ss_pred cCCCCHHHHHHHHHHCCcccCC
Q psy12938 576 GEGYFVEDVEAFLVEAGLLRAG 597 (612)
Q Consensus 576 g~~~~~~~lE~~L~~~g~l~~~ 597 (612)
..+.|+.+|.+.|++...
T Consensus 95 ----~~~~l~~~l~~~g~~~k~ 112 (116)
T 2e7p_A 95 ----QRNELLPLLQDAAATAKT 112 (116)
T ss_dssp ----HTTCHHHHHHHTTC----
T ss_pred ----hCChHHHHHHHccccccc
Confidence 125699999999987543
No 124
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.94 E-value=1.7e-10 Score=108.37 Aligned_cols=93 Identities=19% Similarity=0.206 Sum_probs=71.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCC--CCCcEEEEE-ECCEEeeEEEeccc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKT--SGLPAMLAY-RGGEVVGNFVRLGE 573 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i--~~lPtllvy-k~G~~~~~~vg~~~ 573 (612)
..+|+|+||++||++|+.+.+.|.++++.+. .++|+.|+.+..++.+...|.+ ..+||+++| ++|+++.+++|...
T Consensus 46 ~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~ 125 (164)
T 1sen_A 46 GLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENG 125 (164)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTS
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCC
Confidence 3479999999999999999999999887664 5889999887654225678888 569999999 89999999888633
Q ss_pred ccc---CCCCHHHHHHHHHH
Q psy12938 574 ELG---EGYFVEDVEAFLVE 590 (612)
Q Consensus 574 ~~g---~~~~~~~lE~~L~~ 590 (612)
..- -..+.+.|..+|.+
T Consensus 126 ~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 126 NPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp CTTSTTCCCSHHHHHHHHHH
T ss_pred ccchhcccCCHHHHHHHHHH
Confidence 110 02455777777654
No 125
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.94 E-value=1.4e-09 Score=107.07 Aligned_cols=81 Identities=11% Similarity=0.165 Sum_probs=69.3
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
.+++++||++||++|+.+.+.|+.+|.+|++++|++|+.+..+ .+..+|++.++||+++ +|+ +.++.|...
T Consensus 137 ~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~--~G~-~~~~~G~~~----- 207 (229)
T 2ywm_A 137 PIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVIDASENQ-DLAEQFQVVGVPKIVI--NKG-VAEFVGAQP----- 207 (229)
T ss_dssp CEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEEGGGCH-HHHHHTTCCSSSEEEE--GGG-TEEEESCCC-----
T ss_pred CeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEECCCCH-HHHHHcCCcccCEEEE--CCE-EEEeeCCCC-----
Confidence 3568899999999999999999999999999999999998765 7889999999999998 888 666777533
Q ss_pred CCHHHHHHHHHH
Q psy12938 579 YFVEDVEAFLVE 590 (612)
Q Consensus 579 ~~~~~lE~~L~~ 590 (612)
.++|..+|.+
T Consensus 208 --~~~l~~~l~~ 217 (229)
T 2ywm_A 208 --ENAFLGYIMA 217 (229)
T ss_dssp --HHHHHHHHHH
T ss_pred --HHHHHHHHHH
Confidence 3677777754
No 126
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.93 E-value=1.2e-09 Score=119.77 Aligned_cols=88 Identities=13% Similarity=0.238 Sum_probs=74.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE--eeEEEec
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV--VGNFVRL 571 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~--~~~~vg~ 571 (612)
....|+|+||++||++|+.|.+.|++|+++|. .+.|++||++.. .+...|.+.++||+++|++|.. ..++.|.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~--~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~ 446 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN--DVPSPYEVRGFPTIYFSPANKKLNPKKYEGG 446 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS--CCCTTCCCCSSSEEEEECTTCTTSCEECCSC
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch--hhHhhCCCcccCEEEEEeCCCeEeeeEeCCC
Confidence 35589999999999999999999999999986 499999999876 5778999999999999999986 3434332
Q ss_pred cccccCCCCHHHHHHHHHHCCc
Q psy12938 572 GEELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 572 ~~~~g~~~~~~~lE~~L~~~g~ 593 (612)
.+.++|..||.++.-
T Consensus 447 -------~~~~~l~~~l~~~~~ 461 (481)
T 3f8u_A 447 -------RELSDFISYLQREAT 461 (481)
T ss_dssp -------CSHHHHHHHHHHHCS
T ss_pred -------CCHHHHHHHHHHhcC
Confidence 466999999998865
No 127
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=9.2e-10 Score=95.96 Aligned_cols=70 Identities=64% Similarity=0.958 Sum_probs=61.7
Q ss_pred cceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 309 EKLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 309 ~~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
...++++|.|.|+..||||+|.|++.+.+....+.|+||..|.+||+|++.|+|++|| |||.++.++++.
T Consensus 6 ~~~~~~~v~l~k~~~glG~~i~~~~~g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 79 (107)
T 1wf8_A 6 SGLELFPVELEKDEDGLGISIIGMGVGADAGLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQN 79 (107)
T ss_dssp CCEEEEEEEEECBTTBSCEEEEEEEESCCTTCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHH
T ss_pred CCceEEEEEEEECCCcccEEEEecCCCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 4567889999999999999999966666666567899999999999999999999999 899999987663
No 128
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.93 E-value=2.5e-09 Score=107.04 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=69.0
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhc-----CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccc
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSH-----TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGE 573 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-----~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~ 573 (612)
..+|+.||++||++|+.+.+.|+.||.+| +++.|.+||++..+ .+..+|.+.++||+++ ||+.+ +.|..
T Consensus 139 ~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~-~~~~~~~V~~vPt~~i--~G~~~--~~G~~- 212 (243)
T 2hls_A 139 RVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENP-DIADKYGVMSVPSIAI--NGYLV--FVGVP- 212 (243)
T ss_dssp CEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCH-HHHHHTTCCSSSEEEE--TTEEE--EESCC-
T ss_pred CcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCH-HHHHHcCCeeeCeEEE--CCEEE--EeCCC-
Confidence 36789999999999999999999999998 78999999999776 6778999999999988 99864 55542
Q ss_pred cccCCCCHHHHHHHHHHC
Q psy12938 574 ELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 574 ~~g~~~~~~~lE~~L~~~ 591 (612)
+.++|..+|.+.
T Consensus 213 ------~~~~l~~~l~~~ 224 (243)
T 2hls_A 213 ------YEEDFLDYVKSA 224 (243)
T ss_dssp ------CHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHH
Confidence 347888888754
No 129
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.92 E-value=3.3e-09 Score=97.19 Aligned_cols=85 Identities=22% Similarity=0.247 Sum_probs=73.7
Q ss_pred ceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecC---------------------------CCchhchhhhCCCC
Q psy12938 499 ITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPL---------------------------GCVGDHFSATFKTS 551 (612)
Q Consensus 499 ~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~---------------------------~~~~d~~~~~~~i~ 551 (612)
.+++|.||++||+.|+.+.+.|.+++++| ++.|+.|+. +... .+...|.+.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPH-EVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHH-HHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchH-HHHHHhCCC
Confidence 58999999999999999999999999999 999999988 2332 567899999
Q ss_pred CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHCC
Q psy12938 552 GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 552 ~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
.+|+++++ ++|+++..+.|.. +.++|+.+|.++.
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRA-------GREALLDALLLAG 143 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBC-------CHHHHHHHHHHTT
T ss_pred cccEEEEECCCCCEEEEEcCCC-------CHHHHHHHHHhcc
Confidence 99997777 8999999998763 4589999998874
No 130
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.92 E-value=3.7e-09 Score=96.61 Aligned_cols=87 Identities=15% Similarity=0.160 Sum_probs=72.9
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCch---------------------hchhhhCCCCCCc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVG---------------------DHFSATFKTSGLP 554 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~---------------------d~~~~~~~i~~lP 554 (612)
+.++||.||++||+.|+.+.+.|..++++|+ +++|+.|+.+..+ ..+...|.+.++|
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 105 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLP 105 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCC
Confidence 4589999999999999999999999999986 4999999875421 1567889999999
Q ss_pred EEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 555 AMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 555 tllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+++++ ++|+++..+.|.. +.++|+.+|.+.
T Consensus 106 ~~~lid~~G~i~~~~~G~~-------~~~~l~~~l~~l 136 (151)
T 2f9s_A 106 TTFLINPEGKVVKVVTGTM-------TESMIHDYMNLI 136 (151)
T ss_dssp EEEEECTTSEEEEEEESCC-------CHHHHHHHHHHH
T ss_pred eEEEECCCCcEEEEEeCCC-------CHHHHHHHHHHH
Confidence 99988 8999999888763 448888888753
No 131
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.91 E-value=2.2e-09 Score=114.04 Aligned_cols=85 Identities=11% Similarity=0.104 Sum_probs=67.9
Q ss_pred CceEEEEEeCCCChhhhhhH------HHHHHHHhhcC--CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEE
Q psy12938 498 HITVIAHLSSPSLPACRALN------SSLAELSRSHT--NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFV 569 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~------~~l~~LA~~~~--~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~v 569 (612)
..+|+|+|||+||++|+... +.++.+|..+. .++|++||++..+ .++.+|.+.++|||++|++|+.+ .+.
T Consensus 30 ~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~-~l~~~~~V~~~PTl~~f~~G~~~-~y~ 107 (367)
T 3us3_A 30 YEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDA-AVAKKLGLTEEDSIYVFKEDEVI-EYD 107 (367)
T ss_dssp CSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTH-HHHHHHTCCSTTEEEEEETTEEE-ECC
T ss_pred CCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccH-HHHHHcCCCcCceEEEEECCcEE-EeC
Confidence 34899999999999975443 68899998874 5999999999876 78899999999999999999874 344
Q ss_pred eccccccCCCCHHHHHHHHHHC
Q psy12938 570 RLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 570 g~~~~~g~~~~~~~lE~~L~~~ 591 (612)
|. .+.+.|..||.++
T Consensus 108 G~-------~~~~~i~~~i~~~ 122 (367)
T 3us3_A 108 GE-------FSADTLVEFLLDV 122 (367)
T ss_dssp SC-------CSHHHHHHHHHHH
T ss_pred CC-------CCHHHHHHHHHHh
Confidence 32 3457777777654
No 132
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.91 E-value=7.8e-10 Score=122.15 Aligned_cols=86 Identities=17% Similarity=0.279 Sum_probs=71.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC----CceEEEecCCCchhchhhhCCCCCCcEEEEEECCEE--eeEEEec
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT----NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEV--VGNFVRL 571 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~----~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~--~~~~vg~ 571 (612)
..+|+|+||++||++|+.|.+.|++||++|+ .+.|+++|.+... +.. |.+.++||+++|++|+. ...+.|.
T Consensus 376 ~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~--~~~-~~v~~~Pt~~~~~~G~~~~~~~~~G~ 452 (504)
T 2b5e_A 376 KKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND--VRG-VVIEGYPTIVLYPGGKKSESVVYQGS 452 (504)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC--CSS-CCCSSSSEEEEECCTTSCCCCBCCSC
T ss_pred CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc--ccc-CCceecCeEEEEeCCceecceEecCC
Confidence 4579999999999999999999999999886 7999999988653 334 99999999999999976 4444443
Q ss_pred cccccCCCCHHHHHHHHHHCCc
Q psy12938 572 GEELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 572 ~~~~g~~~~~~~lE~~L~~~g~ 593 (612)
.+.++|..||.+++-
T Consensus 453 -------~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 453 -------RSLDSLFDFIKENGH 467 (504)
T ss_dssp -------CCHHHHHHHHHHHCT
T ss_pred -------CCHHHHHHHHHhcCC
Confidence 356899999988754
No 133
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.90 E-value=1.4e-09 Score=118.22 Aligned_cols=65 Identities=11% Similarity=0.160 Sum_probs=59.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC---------CceEEEecCCCchhchhhhCCCCCCcEEEEEECCE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT---------NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGE 563 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---------~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~ 563 (612)
..+|||+||++||++|+.|.|.|++||++|. .++|++||.+..+ .+..+|.|.++||+++|++|.
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~-~la~~y~V~~~PTlilf~~gg 115 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEV-DLCRKYDINFVPRLFFFYPRD 115 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCH-HHHHHTTCCSSCEEEEEEESS
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCH-HHHHHcCCCccCeEEEEECCC
Confidence 3579999999999999999999999999997 3999999999876 788999999999999998554
No 134
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.90 E-value=3.9e-09 Score=95.65 Aligned_cols=83 Identities=17% Similarity=0.259 Sum_probs=69.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHH---HHhhc--CCceEEEecCCCchhc-----------------------hhhhCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAE---LSRSH--TNVKFVSVPLGCVGDH-----------------------FSATFK 549 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~---LA~~~--~~vkF~ki~~~~~~d~-----------------------~~~~~~ 549 (612)
+.+|+++||++||++|+.+.+.|.+ |.++| .++.|+.|+.+...+. +...|.
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 4589999999999999999999999 99988 4699999987754211 357899
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++|+++++ ++|+++.+.++. ++|+.+|.+
T Consensus 111 v~~~P~~~lid~~G~i~~~~~~~----------~~l~~~l~e 142 (142)
T 3eur_A 111 LRAIPTLYLLDKNKTVLLKDATL----------QKVEQYLAE 142 (142)
T ss_dssp CTTCSEEEEECTTCBEEEEEECH----------HHHHHHHHC
T ss_pred CCcCCeEEEECCCCcEEecCCCH----------HHHHHHHhC
Confidence 9999999998 889999877654 889998863
No 135
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.89 E-value=2.2e-09 Score=113.17 Aligned_cols=86 Identities=13% Similarity=0.242 Sum_probs=71.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC---ceEEEecCCCchhchhhhCCCCCCcEEEEEECC--EEeeEEEecc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN---VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGG--EVVGNFVRLG 572 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~---vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G--~~~~~~vg~~ 572 (612)
...++|.||++||++|+.|.+.|.+||++|.. +.|++||++... ..+|.+.++||+++|++| +....+.|
T Consensus 267 ~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~---~~~~~v~~~Pt~~~~~~~~~~~~~~~~G-- 341 (361)
T 3uem_A 267 KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE---VEAVKVHSFPTLKFFPASADRTVIDYNG-- 341 (361)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB---CSSCCCCSSSEEEEECSSSSCCCEECCS--
T ss_pred CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc---hhhcCCcccCeEEEEECCCCcceeEecC--
Confidence 45899999999999999999999999999864 999999988652 478999999999999665 44444443
Q ss_pred ccccCCCCHHHHHHHHHHCCc
Q psy12938 573 EELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 573 ~~~g~~~~~~~lE~~L~~~g~ 593 (612)
..+.++|..||.+++-
T Consensus 342 -----~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 342 -----ERTLDGFKKFLESGGQ 357 (361)
T ss_dssp -----CSSHHHHHHHHTTTSC
T ss_pred -----CCCHHHHHHHHHhcCC
Confidence 3566999999987763
No 136
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.88 E-value=1.5e-09 Score=100.47 Aligned_cols=87 Identities=10% Similarity=0.132 Sum_probs=70.0
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhc--CCceEEEecC----------------------------CCchhchhh
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSH--TNVKFVSVPL----------------------------GCVGDHFSA 546 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~----------------------------~~~~d~~~~ 546 (612)
++.+|+|+||++||++|+.+.+.|.+++++| .++.|+-|.. +... .+..
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 115 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGG-TIAQ 115 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTC-HHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCch-HHHH
Confidence 3458999999999999999999999999986 4577766543 2122 4668
Q ss_pred hCCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 547 TFKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 547 ~~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.|.+.++||+++| ++|+++..+.|.. +.++|+.+|.+.
T Consensus 116 ~~~v~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~i~~~ 154 (164)
T 2h30_A 116 NLNISVYPSWALIGKDGDVQRIVKGSI-------NEAQALALIRNP 154 (164)
T ss_dssp HTTCCSSSEEEEECTTSCEEEEEESCC-------CHHHHHHHHHCT
T ss_pred HcCCCccceEEEECCCCcEEEEEcCCC-------CHHHHHHHHHHH
Confidence 8999999999999 8999999888753 348899888754
No 137
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.88 E-value=2.1e-09 Score=97.25 Aligned_cols=66 Identities=23% Similarity=0.267 Sum_probs=58.1
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..++++|.|.|+..||||+|.| +.+...++.++||.+|.+||+|+++|+|++|| |||.++.+++|.
T Consensus 27 ~~~~~~v~l~k~~~glG~~i~g---g~~~~~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~ 96 (130)
T 1i16_A 27 EATVCTVTLEKMSAGLGFSLEG---GKGSLHGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRF 96 (130)
T ss_dssp SEEEEEEEEETTSSSTTEEEEC---CCCCSSSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHH
T ss_pred CCcEEEEEEEcCCCccCEEEec---CcCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3567789999999999999999 66655566789999999999999997799999 999999998774
No 138
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.88 E-value=5e-09 Score=95.96 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=70.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc-----------------------hhchhhhCC--
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV-----------------------GDHFSATFK-- 549 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~-----------------------~d~~~~~~~-- 549 (612)
++.+|+|.||++||++|+.+.+.|.+++++|. ++.|+.|+.+.. ...+...|.
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 45689999999999999999999999999983 699999987621 113556788
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++|+++++ ++|+++..+.|.. +.++|+.+|.+
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~ 137 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEV-------NEKSLTDAVKL 137 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCC-------CHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCC-------CHHHHHHHHHH
Confidence 9999988888 8999999887763 34888888865
No 139
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.87 E-value=5e-09 Score=96.06 Aligned_cols=83 Identities=13% Similarity=0.175 Sum_probs=68.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCc------------------------hhchhhhCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCV------------------------GDHFSATFKTS 551 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~------------------------~d~~~~~~~i~ 551 (612)
+.+|+|.||++||++|+.+.+.|.+++++|+. +.|+.|+.+.. ...+...|.+.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 45899999999999999999999999999975 99999988751 12577899999
Q ss_pred CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 552 GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 552 ~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
.+|+++++ ++|+++..+++ .++|+.+|.+
T Consensus 109 ~~P~~~lid~~G~i~~~~~~----------~~~l~~~l~~ 138 (152)
T 2lrn_A 109 GFPHIILVDPEGKIVAKELR----------GDDLYNTVEK 138 (152)
T ss_dssp SSCEEEEECTTSEEEEECCC----------TTHHHHHHHH
T ss_pred cCCeEEEECCCCeEEEeeCC----------HHHHHHHHHH
Confidence 99999999 89999997632 1456666654
No 140
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.87 E-value=5.7e-09 Score=96.50 Aligned_cols=86 Identities=16% Similarity=0.281 Sum_probs=70.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCchhchhhhC---------------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVGDHFSATF--------------------------- 548 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~d~~~~~~--------------------------- 548 (612)
+.++||.||++||+.|+.+.+.|..++++|++ +.|+.|+.+... ....+|
T Consensus 34 gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 34 GKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQL-PNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCH-HHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCH-HHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 45899999999999999999999999999974 999999887543 333444
Q ss_pred CCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 549 KTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 549 ~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+..+|+++++ ++|+++..+.|.. +.++|+.+|.+.
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPR-------SKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCC-------CHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCC-------CHHHHHHHHHHH
Confidence 79999998888 8999999888763 347777777643
No 141
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.87 E-value=8e-09 Score=94.26 Aligned_cols=89 Identities=17% Similarity=0.208 Sum_probs=74.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCchh---------------------chhhhCCCCCCc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVGD---------------------HFSATFKTSGLP 554 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~d---------------------~~~~~~~i~~lP 554 (612)
+.+++|.||++||+.|+.+.+.|..++++|+. ++|+.|+.+.... .+...|.+.++|
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 107 (152)
T 3gl3_A 28 GSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMP 107 (152)
T ss_dssp TSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSS
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCC
Confidence 45899999999999999999999999999975 8999998774321 355779999999
Q ss_pred EEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 555 AMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 555 tllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+++++ ++|+++..++|... ...+.|+.+|.++
T Consensus 108 ~~~lid~~G~i~~~~~g~~~-----~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 108 TSFLIDRNGKVLLQHVGFRP-----ADKEALEQQILAA 140 (152)
T ss_dssp EEEEECTTSBEEEEEESCCT-----TTHHHHHHHHHHH
T ss_pred eEEEECCCCCEEEEEccCCC-----cCHHHHHHHHHHH
Confidence 98777 99999999988632 3558888888764
No 142
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.86 E-value=1.7e-09 Score=125.81 Aligned_cols=97 Identities=14% Similarity=0.193 Sum_probs=70.2
Q ss_pred HHHHHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEEC
Q psy12938 483 MYDRLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRG 561 (612)
Q Consensus 483 l~~~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~ 561 (612)
|....|.+.+. ...+++|+||++||++|+.|.+.++++|+++. .++|++||.+..+ .+..+|.+.++||+++|++
T Consensus 121 l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Pt~~~~~~ 196 (780)
T 3apo_A 121 LERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDR-MLCRMKGVNSYPSLFIFRS 196 (780)
T ss_dssp CCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCS-SCC--------CEEEEECT
T ss_pred echHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcH-HHHHHcCCceeeeEEEEeC
Confidence 33445666662 35589999999999999999999999999986 4999999999776 7889999999999999999
Q ss_pred CEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 562 GEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 562 G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|+.+..+.|.. +.+.|..||.+
T Consensus 197 g~~~~~~~G~~-------~~~~l~~~l~~ 218 (780)
T 3apo_A 197 GMAAVKYNGDR-------SKESLVAFAMQ 218 (780)
T ss_dssp TSCCEECCSCS-------CHHHHHHHHHT
T ss_pred CcEeeEecCCC-------CHHHHHHHHHH
Confidence 99877777643 33555555543
No 143
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.86 E-value=8.3e-09 Score=94.97 Aligned_cols=85 Identities=12% Similarity=0.110 Sum_probs=69.4
Q ss_pred CceEEEEEeCCCChhhhh-hHHHHHHHHhhcCC--ceEEEecCC----------------------------Cchhc---
Q psy12938 498 HITVIAHLSSPSLPACRA-LNSSLAELSRSHTN--VKFVSVPLG----------------------------CVGDH--- 543 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~-m~~~l~~LA~~~~~--vkF~ki~~~----------------------------~~~d~--- 543 (612)
+.+|||+||++||++|+. +.+.|.+++++|++ +.|+.|+.+ ... .
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 108 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPR-EGQR 108 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCC-TTCS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCcc-ccch
Confidence 458999999999999999 79999999999974 999998752 111 2
Q ss_pred ---hhhhCCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 544 ---FSATFKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 544 ---~~~~~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+...|.+.++|+++++ ++|+++..+.|... .+.|+.+|.+
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~-------~~~l~~~i~~ 152 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVD-------DFVLGLLLGS 152 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCC-------HHHHHHHHHH
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCC-------HHHHHHHHHH
Confidence 6789999999999999 69999999888643 3667776654
No 144
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.84 E-value=1.3e-08 Score=93.56 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=69.3
Q ss_pred CceEEEEEeCCCChhhhhh-HHHHHHHHhhcC--CceEEEecCC----------------------------Cchh----
Q psy12938 498 HITVIAHLSSPSLPACRAL-NSSLAELSRSHT--NVKFVSVPLG----------------------------CVGD---- 542 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m-~~~l~~LA~~~~--~vkF~ki~~~----------------------------~~~d---- 542 (612)
+.+|||+||++||++|+.+ .+.|.+++++|+ ++.|+.|+.+ ....
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 4589999999999999995 999999999997 5999998753 1100
Q ss_pred chhhhCCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 543 HFSATFKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 543 ~~~~~~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
.+...|.+.++|+++++ ++|+++..+.|... .++|+.+|.+
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~-------~~~l~~~i~~ 149 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVS-------ELLLGAEIAT 149 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCC-------HHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCC-------HHHHHHHHHH
Confidence 26789999999998888 89999999988633 3667766654
No 145
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.84 E-value=1.3e-08 Score=90.16 Aligned_cols=86 Identities=15% Similarity=0.172 Sum_probs=71.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecC----------------------------CCchhchhhh
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPL----------------------------GCVGDHFSAT 547 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~----------------------------~~~~d~~~~~ 547 (612)
++.++||.||++||+.|+.+.+.|.+++++++ .+.|+.|+. +... .+...
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSG-KLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTC-HHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcch-HHHHH
Confidence 34589999999999999999999999999986 699999832 1111 46789
Q ss_pred CCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 548 FKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 548 ~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|.+.++|+++++ ++|+++..+.|... .++|+.+|.+
T Consensus 100 ~~v~~~P~~~lid~~G~i~~~~~g~~~-------~~~l~~~l~~ 136 (138)
T 4evm_A 100 YGVRSYPTQAFIDKEGKLVKTHPGFME-------KDAILQTLKE 136 (138)
T ss_dssp TTCCSSSEEEEECTTCCEEEEEESCCC-------HHHHHHHHHH
T ss_pred cCcccCCeEEEECCCCcEEEeecCCCc-------HHHHHHHHHh
Confidence 999999999999 99999998887633 4888888875
No 146
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.83 E-value=3.5e-09 Score=91.92 Aligned_cols=63 Identities=33% Similarity=0.562 Sum_probs=54.7
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCC--CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAG--LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~--~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++++|.|.|++.||||+|.| +.+.. .++.|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 3 ~~~~v~l~k~~~glG~~i~g---g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 71 (105)
T 2awx_A 3 KIMEIKLIKGPKGLGFSIAG---GVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTH 71 (105)
T ss_dssp CEEEEEEECBTTBSSEEEEE---CBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBH
T ss_pred eEEEEEEEECCCCCCEEEeC---ccCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 57889999999999999999 54432 245699999999999999999999999 89999988665
No 147
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.83 E-value=2.2e-09 Score=94.41 Aligned_cols=67 Identities=64% Similarity=0.952 Sum_probs=58.7
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+++++|.|.|+..||||+|.+.+.+.+....+.|+||.+|.|||+|++.|+|++|| |||.++.++++
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~ 73 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQ 73 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCSSSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 57888999999999999999965555554456799999999999999999999999 89999998765
No 148
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.82 E-value=4.2e-09 Score=89.23 Aligned_cols=64 Identities=34% Similarity=0.576 Sum_probs=55.2
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCC--CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAG--LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~--~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+++++|.|.|++.||||+|.| |.+.. ..+.|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 2 ~~~~~v~l~k~~~g~G~~i~g---g~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 71 (94)
T 2fe5_A 2 MTIMEVNLLKGPKGLGFSIAG---GIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRH 71 (94)
T ss_dssp CCEEEEEEECCTTCSCEEEEE---CBTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBH
T ss_pred cEEEEEEEEECCCCCCEEEEc---ccCCCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 467889999999999999999 44432 346699999999999999999999999 89999988654
No 149
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.82 E-value=9.1e-09 Score=102.86 Aligned_cols=83 Identities=14% Similarity=0.248 Sum_probs=69.1
Q ss_pred CceEEEEEeC--CCChhhhhhHHHHHHHHhhc---CCceEEEecCCC-----chhchhhhCCCC--CCcEEEEEECCE--
Q psy12938 498 HITVIAHLSS--PSLPACRALNSSLAELSRSH---TNVKFVSVPLGC-----VGDHFSATFKTS--GLPAMLAYRGGE-- 563 (612)
Q Consensus 498 ~~~Vvvhfy~--~~~~~C~~m~~~l~~LA~~~---~~vkF~ki~~~~-----~~d~~~~~~~i~--~lPtllvyk~G~-- 563 (612)
..+|+|.||+ |||+ |.|.|+.||..| +.++|++||++. .+ .+..+|.|. ++|||++|++|+
T Consensus 22 ~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~-~l~~~~~V~~~~~PTl~~f~~G~~~ 96 (240)
T 2qc7_A 22 SKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNM-ELSEKYKLDKESYPVFYLFRDGDFE 96 (240)
T ss_dssp CSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSH-HHHHHTTCCGGGCSEEEEEETTCSS
T ss_pred CCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhH-HHHHHcCCCCCCCCEEEEEeCCCcC
Confidence 3489999999 9998 999999999997 569999999653 44 688999999 999999999998
Q ss_pred EeeEEEeccccccCCCCHHHHHHHHHHCC
Q psy12938 564 VVGNFVRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 564 ~~~~~vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
....+.|. .+.+.|..||.++.
T Consensus 97 ~~~~y~G~-------~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 97 NPVPYTGA-------VKVGAIQRWLKGQG 118 (240)
T ss_dssp CCEECCSC-------SCHHHHHHHHHHTT
T ss_pred cceeecCC-------CCHHHHHHHHHHhc
Confidence 34444432 45689999999885
No 150
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.82 E-value=7.8e-09 Score=93.48 Aligned_cols=84 Identities=14% Similarity=0.183 Sum_probs=69.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhc-C--CceEEEecCCCch------------------------hchhhhCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSH-T--NVKFVSVPLGCVG------------------------DHFSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~-~--~vkF~ki~~~~~~------------------------d~~~~~~~ 549 (612)
++.+|+|+||++||++|+.+.+.|..++++| . ++.|+.|+.+... ..+...|.
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4568999999999999999999999999999 5 4899999876421 15678999
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.++|+++++ ++|+++..+. ..++++.+|.+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~----------~~~~l~~~l~~ 143 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI----------QGEALTGKLKE 143 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC----------CHHHHHHHHHH
T ss_pred CCCcCEEEEECCCCeEEEecC----------CHHHHHHHHHH
Confidence 9999999999 8999988664 34777777764
No 151
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.81 E-value=3e-08 Score=95.71 Aligned_cols=96 Identities=20% Similarity=0.362 Sum_probs=78.5
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcC--CCeEEEEEeecCCC-------C----------ch-------------h--
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKDP-------V----------NS-------------E-- 46 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~--~~~v~l~v~r~~~~-------~----------~~-------------~-- 46 (612)
+||+|++|||..+.++++.++.++|+.. +..+.|+|.|.... . .. .
T Consensus 57 ~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~g 136 (196)
T 1p1d_A 57 IGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDP 136 (196)
T ss_dssp SSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCC
Confidence 5999999999999999999999999987 67899999876421 0 00 0
Q ss_pred --hHHh-------hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 47 --VAQL-------IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 47 --i~~i-------~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
|..+ ..|+|++||+|++|||..+.+++++++..+|+..+..+.|+|.|..
T Consensus 137 v~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 195 (196)
T 1p1d_A 137 LVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKDE 195 (196)
T ss_dssp CEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEEEEECCC
T ss_pred EEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 1111 2234999999999999999999999999999988899999998853
No 152
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.81 E-value=5.4e-09 Score=90.10 Aligned_cols=65 Identities=32% Similarity=0.481 Sum_probs=56.6
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+++++|.|.|+..||||+|.| |.+.+. .+.|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 2 ~~~~~~v~l~k~~~glG~~i~~---g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 72 (102)
T 2i1n_A 2 MFKYEEIVLERGNSGLGFSIAG---GIDNPHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVH 72 (102)
T ss_dssp CEEEEEEEEECBTTBTSEEEEE---CTTSCSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CceEEEEEEEECCCcCCEEEEc---ccCCCCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4678889999999999999999 555432 46799999999999999999999999 89999988765
No 153
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.81 E-value=5.3e-09 Score=115.99 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=72.9
Q ss_pred HHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC----ceEEEecCCC--chhchhhhCCCCCCcEEEEEEC
Q psy12938 488 FLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHTN----VKFVSVPLGC--VGDHFSATFKTSGLPAMLAYRG 561 (612)
Q Consensus 488 ~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~----vkF~ki~~~~--~~d~~~~~~~i~~lPtllvyk~ 561 (612)
|...+.+ ...+|+|+||++||++|+.|.+.|++||++|.. ++|++||.+. .+ .+..+|.+.++||+++|++
T Consensus 22 f~~~v~~--~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~-~l~~~~~V~~~PTl~~f~~ 98 (519)
T 3t58_A 22 VRPTVLG--SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNS-AVCREFNIAGFPTVRFFQA 98 (519)
T ss_dssp HHHHHSS--CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGH-HHHHHTTCCSBSEEEEECT
T ss_pred HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccH-HHHHHcCCcccCEEEEEcC
Confidence 4344433 345899999999999999999999999999964 9999999853 44 7889999999999999997
Q ss_pred CEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 562 GEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 562 G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|...+..+.. ..+ +.+.+.|+.+|.+
T Consensus 99 g~~~G~~~~~-~~g--~~~~~~L~~~l~~ 124 (519)
T 3t58_A 99 FTKNGSGATL-PGA--GANVQTLRMRLID 124 (519)
T ss_dssp TCCSCCCEEE-CCS--SCCHHHHHHHHHH
T ss_pred cccCCCceeE-ecC--CCCHHHHHHHHHH
Confidence 6554432221 112 2456777777654
No 154
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.81 E-value=9.5e-09 Score=93.75 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=73.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCch----------------------hchhhhCCCCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVG----------------------DHFSATFKTSG 552 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~----------------------d~~~~~~~i~~ 552 (612)
.+.+++|.||++||+.|+.+.+.|..++++|++ +.|+.|+.+... ..+...|.+.+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 345899999999999999999999999999964 999999877532 14678899999
Q ss_pred CcEEEEEE-CCEEeeEEEeccccccCCCCHHHHHHHHHHCCc
Q psy12938 553 LPAMLAYR-GGEVVGNFVRLGEELGEGYFVEDVEAFLVEAGL 593 (612)
Q Consensus 553 lPtllvyk-~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g~ 593 (612)
+|+++++. +|+++..+.|.. +.++|+.+|.+..-
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRP-------SDPKTAEKFNELLG 143 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCT-------TCHHHHHHHHHHHT
T ss_pred CCEEEEECCCCeEEEccCCCC-------CHHHHHHHHHHHhc
Confidence 99999997 999998766542 33788888876543
No 155
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.80 E-value=1.8e-08 Score=93.51 Aligned_cols=87 Identities=10% Similarity=0.175 Sum_probs=71.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC------------------Cch-----------------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG------------------CVG----------------- 541 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~------------------~~~----------------- 541 (612)
++.++||+||++||+.|+.+.+.|.+++++|++++|+.|+.+ ...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 456899999999999999999999999999999999999876 221
Q ss_pred ----hchhhhCCCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 542 ----DHFSATFKTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 542 ----d~~~~~~~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
..+...|.+..+|+++++ ++|+++. .|.. .+.++|+.+|.+.
T Consensus 116 ~~d~~~~~~~~~v~~~P~~~lid~~G~i~~--~g~~------~~~~~l~~~l~~l 162 (165)
T 3ha9_A 116 VMDDGSLVEKFNVRSIDYIVIMDKSSNVLY--AGTT------PSLGELESVIKSV 162 (165)
T ss_dssp EECCSHHHHHTTCCSSSEEEEEETTCCEEE--EEES------CCHHHHHHHHHHC
T ss_pred EeChHHHHHHhCCCCceEEEEEcCCCcEEE--eCCC------CCHHHHHHHHHHH
Confidence 146788999999999999 8899988 5542 1457888888753
No 156
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.80 E-value=5.4e-09 Score=92.99 Aligned_cols=65 Identities=28% Similarity=0.455 Sum_probs=56.4
Q ss_pred eeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 311 LTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 311 ~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
....+|.|.|+. .||||+|.| |.++...+.|+||.+|.+||+|+++|+|++|| |||.++.++++.
T Consensus 23 ~~~~~v~l~k~~~~~lGf~i~g---g~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~ 92 (118)
T 3b76_A 23 MHEKVVNIQKDPGESLGMTVAG---GASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRS 92 (118)
T ss_dssp EEEEEEEEECCTTCCCCEEEEE---CSCSTTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHH
T ss_pred CCcEEEEEEeCCCCccCEEEec---CCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 345668888986 899999999 66555567799999999999999999999999 999999998874
No 157
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.80 E-value=2.1e-09 Score=115.03 Aligned_cols=94 Identities=24% Similarity=0.411 Sum_probs=36.4
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcCC--CeEEEEEeecCCCCch------------------hhHHhhhc------c
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNTS--GLVRFLIGREKDPVNS------------------EVAQLIRQ------S 54 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~~--~~v~l~v~r~~~~~~~------------------~i~~i~~G------~ 54 (612)
+||+|++|||.++.+.+|.+++.+|+..+ ..+.|+|.|....... .|..+..| +
T Consensus 253 ~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g~I~~V~~gs~A~~aG 332 (388)
T 3suz_A 253 IGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGG 332 (388)
T ss_dssp TTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC-----------------------------------
T ss_pred CCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeEeecCCCCccceEEecCEEEEeecCCHHHHcC
Confidence 59999999999999999999999999863 4699999887432110 02233322 5
Q ss_pred cCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEee
Q psy12938 55 LQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGR 94 (612)
Q Consensus 55 L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R 94 (612)
|++||+|++|||+++.+.+|++++.+|+.+++.++|+|.+
T Consensus 333 L~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 333 VRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp ----------------------------------------
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 9999999999999999999999999999999999999863
No 158
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.79 E-value=7.7e-09 Score=120.24 Aligned_cols=101 Identities=9% Similarity=0.056 Sum_probs=84.1
Q ss_pred HHHHHHhhccCCCCceEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCCCchhchhhhCCCCCCcEEEEEECCE
Q psy12938 485 DRLFLSEIDSEPRHITVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGE 563 (612)
Q Consensus 485 ~~~~~~~V~~~~~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~ 563 (612)
...|.+.+.. ...+|+|.||++||++|+.+.+.|+.||++|. .++|++|+.+..+ .+..+|.+.++||+++|++|+
T Consensus 664 ~~~~~~~~~~--~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~~~-~~~~~~~v~~~Pt~~~~~~g~ 740 (780)
T 3apo_A 664 PQTFNEKVLQ--GKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQAYP-QTCQKAGIKAYPSVKLYQYER 740 (780)
T ss_dssp HHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCH-HHHHHTTCCSSSEEEEEEEET
T ss_pred HHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCCCH-HHHHhcCCCcCCEEEEEcCCC
Confidence 3456555543 34589999999999999999999999999994 7999999999876 688999999999999999999
Q ss_pred EeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 564 VVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 564 ~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+.+++|+.- | ..+.++|+.+|.++
T Consensus 741 ~~~~~~G~~~--g-~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 741 AKKSIWEEQI--N-SRDAKTIAALIYGK 765 (780)
T ss_dssp TTTEEEEEEE--C-CCCHHHHHHHHHHH
T ss_pred ccccccCccc--C-CcCHHHHHHHHHHH
Confidence 9998988621 1 35668899998765
No 159
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.79 E-value=5.5e-09 Score=94.49 Aligned_cols=74 Identities=8% Similarity=0.164 Sum_probs=65.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCchhc-------------------------hhhhCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVGDH-------------------------FSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~d~-------------------------~~~~~~ 549 (612)
++.+|+|+||++||+.|+.+.+.|..++++|+. +.|+.|+.+... . +...|.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKD-EEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSS-HHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCH-HHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 345899999999999999999999999999975 999999887543 3 778899
Q ss_pred CCCCcEEEEE-ECCEEeeEEEec
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRL 571 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~ 571 (612)
+..+|+++++ ++|+++.++.|.
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCG
T ss_pred cCCCCEEEEECCCCcEEEecCCH
Confidence 9999999999 899999988765
No 160
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.77 E-value=2.7e-08 Score=91.83 Aligned_cols=76 Identities=18% Similarity=0.242 Sum_probs=65.8
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCC-------------------chhchhhhCCCCCCcEE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGC-------------------VGDHFSATFKTSGLPAM 556 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~-------------------~~d~~~~~~~i~~lPtl 556 (612)
+.+|+|.||++||+.|+.+.+.|.+++++|+ ++.|+.|+.+. .. .+...|.+..+|++
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATG-QVQQRYGANRLPDT 119 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTS-HHHHHTTCCSSSEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchH-HHHHHhCCCCcceE
Confidence 4589999999999999999999999999997 79999998765 33 57789999999996
Q ss_pred EEE-ECCEEeeEEEecccc
Q psy12938 557 LAY-RGGEVVGNFVRLGEE 574 (612)
Q Consensus 557 lvy-k~G~~~~~~vg~~~~ 574 (612)
+++ ++|+++..+.|....
T Consensus 120 ~lid~~G~i~~~~~G~~~~ 138 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEW 138 (158)
T ss_dssp EEECTTSBEEEEEESCCCT
T ss_pred EEEcCCCCEEEEEeCCCcc
Confidence 666 999999999887443
No 161
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.77 E-value=1.9e-08 Score=91.88 Aligned_cols=89 Identities=21% Similarity=0.332 Sum_probs=71.6
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCc-h---------------------hchhhhCCCCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCV-G---------------------DHFSATFKTSG 552 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~-~---------------------d~~~~~~~i~~ 552 (612)
++.+++|.||++||+.|+.+.+.|.+++++|+. +.|+.|+.+.. . ..+...|.+..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 345899999999999999999999999999975 89999988753 1 12667899999
Q ss_pred Cc-EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 553 LP-AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 553 lP-tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+| ++++.++|+++..+.|... ...++++.+|.+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~-----~~~~~l~~~l~~ 140 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAME-----WDHPEVIAFLNN 140 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCC-----TTSHHHHHHHHT
T ss_pred CCeEEEECCCCcEEEEEcCCCc-----cccHHHHHHHHH
Confidence 99 5555599999999988743 344788888864
No 162
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.75 E-value=1e-08 Score=95.51 Aligned_cols=73 Identities=19% Similarity=0.235 Sum_probs=60.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC-----------------------CchhchhhhCCCCCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG-----------------------CVGDHFSATFKTSGL 553 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~-----------------------~~~d~~~~~~~i~~l 553 (612)
++.++||+||++||++|+.+.+.|.+|+++ +++|+.|+.+ ... .+...|.+.++
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~~ 126 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDG-MLGLDLGVYGA 126 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTC-HHHHHHTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcch-HHHHHcCcccc
Confidence 455899999999999999999999999987 7888888732 222 46678999999
Q ss_pred c-EEEEEECCEEeeEEEecc
Q psy12938 554 P-AMLAYRGGEVVGNFVRLG 572 (612)
Q Consensus 554 P-tllvyk~G~~~~~~vg~~ 572 (612)
| ++++.++|+++..+.|..
T Consensus 127 P~~~lid~~G~i~~~~~g~~ 146 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDL 146 (168)
T ss_dssp SEEEEECTTSBEEEEEESCC
T ss_pred CEEEEECCCCeEEEEEeCCC
Confidence 9 677778999999888753
No 163
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.75 E-value=9.1e-09 Score=91.30 Aligned_cols=65 Identities=34% Similarity=0.563 Sum_probs=55.9
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCC--CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAG--LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~--~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++.+|.|.|+..||||+|.| |.+.. .++.|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 22 ~~~~~~v~l~k~~~glG~~i~g---g~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 92 (117)
T 2byg_A 22 SMTVVEIKLFKGPKGLGFSIAG---GVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTH 92 (117)
T ss_dssp EEEEEEEEEECBTTBSSEEEEE---CTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCceEEEEEEeCCCCcCEEEEc---ccCCCCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3467789999999999999999 54433 246799999999999999999999999 89999998776
No 164
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.75 E-value=9.2e-09 Score=87.55 Aligned_cols=64 Identities=36% Similarity=0.594 Sum_probs=56.2
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|+..+|||+|.| +.+....+.|+||..|.++|+|++.|+|++|| |||.++.++++
T Consensus 4 g~~~~v~l~k~~~~lG~~i~~---g~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 71 (96)
T 1d5g_A 4 GDIFEVELAKNDNSLGISVTG---GVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATH 71 (96)
T ss_dssp TCEEEEEEECSSSSCCEEEEC---CSSSCSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCH
T ss_pred CCEEEEEEEeCCCCCCEEEEC---CCCCCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 467889999999999999999 55554456799999999999999999999999 89999998755
No 165
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.74 E-value=9.9e-09 Score=103.04 Aligned_cols=81 Identities=12% Similarity=0.273 Sum_probs=67.3
Q ss_pred CceEEEEEe--CCCChhhhhhHHHHHHHHhhc----CCceEEEecCCC-----chhchhhhCCCC--CCcEEEEEECCEE
Q psy12938 498 HITVIAHLS--SPSLPACRALNSSLAELSRSH----TNVKFVSVPLGC-----VGDHFSATFKTS--GLPAMLAYRGGEV 564 (612)
Q Consensus 498 ~~~Vvvhfy--~~~~~~C~~m~~~l~~LA~~~----~~vkF~ki~~~~-----~~d~~~~~~~i~--~lPtllvyk~G~~ 564 (612)
...|+|.|| +|||+ |.|.|++||..| +.+.|++||++. .+ .++.+|.|. ++|||++|+ |+.
T Consensus 33 ~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~-~la~~~~V~~~~~PTl~~F~-G~~ 106 (248)
T 2c0g_A 33 FPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENK-ALGDRYKVDDKNFPSIFLFK-GNA 106 (248)
T ss_dssp SSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTH-HHHHHTTCCTTSCCEEEEES-SSS
T ss_pred CCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccH-HHHHHhCCCcCCCCeEEEEe-CCc
Confidence 458999999 99998 999999999987 579999999876 55 688999999 999999999 873
Q ss_pred --eeEE--EeccccccCCCCHHHHHHHHHHC
Q psy12938 565 --VGNF--VRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 565 --~~~~--vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
...+ .| ..+.+.|..||.++
T Consensus 107 ~~~~~y~~~G-------~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 107 DEYVQLPSHV-------DVTLDNLKAFVSAN 130 (248)
T ss_dssp SSEEECCTTS-------CCCHHHHHHHHHHH
T ss_pred CcceeecccC-------CCCHHHHHHHHHHh
Confidence 2222 22 34668999999876
No 166
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=3.9e-09 Score=93.71 Aligned_cols=63 Identities=37% Similarity=0.602 Sum_probs=55.6
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+|.|.|+..||||+|.| +.+...++.|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 25 ~~~~v~L~k~~~glGf~l~~---g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 91 (117)
T 2fne_A 25 QCKSITLERGPDGLGFSIVG---GYGSPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTH 91 (117)
T ss_dssp EEEEEEECCBTTBTSEEEEE---EEEETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred ccEEEEEEeCCCcccEEEec---ccCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 56779999999999999999 55544456799999999999999999999999 89999998765
No 167
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=1.2e-08 Score=89.21 Aligned_cols=65 Identities=32% Similarity=0.592 Sum_probs=57.3
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.++|.|.|+..||||+|.+ +.+...+..|+||..|.++|+|++.|+|++|| |||.++.++++
T Consensus 6 ~~~~~~v~l~~~~~glG~~l~~---g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 74 (110)
T 1um1_A 6 SGYVFTVELERGPSGLGMGLID---GMHTHLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGY 74 (110)
T ss_dssp CCCEEEEEEECCTTCCCEEEEE---TTTSTTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCH
T ss_pred CCcEEEEEEEECCCccCEEEeC---CcCCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3467889999999999999999 66655556799999999999999999999999 89999988665
No 168
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=8.9e-09 Score=90.17 Aligned_cols=62 Identities=24% Similarity=0.454 Sum_probs=52.9
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
++..|.|.|+ .||||+|.| |.+... ..++||.+|.+||+|+++|+|++|| |||.++.+++|.
T Consensus 15 ~~~~v~l~k~-~glG~~i~g---g~~~~~-~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~ 80 (109)
T 1wi4_A 15 AFRVITVTKE-TGLGLKILG---GINRNE-GPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFE 80 (109)
T ss_dssp TEEEEEECCS-SCCCEEEEE---CSSSSS-CSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHH
T ss_pred cEEEEEEeCC-CccCEEEEe---ccCCCC-CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 4566889887 799999999 555432 3489999999999999999999999 999999998774
No 169
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.73 E-value=2e-08 Score=97.00 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=76.3
Q ss_pred eeEEEEEEeeCC-CCcceEEEeccCCCCCCC-CccceEEEEeccCchhcccCCccccc----CCceeeeeccc-------
Q psy12938 311 LTLLGVELMKGA-EGLGLSIIGMGVGADAGL-EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV------- 377 (612)
Q Consensus 311 ~~~~~v~l~k~~-~glG~si~g~~~g~~~~~-~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~------- 377 (612)
.+.++|.|.|+. .||||+|.| +.+... ...++||..|.+|++|++.|+|++|| |||..+.++++
T Consensus 5 ~~~~~v~l~~~~~~glG~~i~~---~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 81 (196)
T 1p1d_A 5 TETTEVVLTADPVTGFGIQLQG---SVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLL 81 (196)
T ss_dssp CEEEEEEEECBTTTBCCCEEEE---CSSCSSSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHH
T ss_pred cEEEEEEEEeCCCCccCEEEeC---CcCCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 467889999997 899999999 544322 35689999999999999999999999 78877763210
Q ss_pred -----cc--------CC------------------CC--------------cccceEEEEeeccccccccCcceeccCCc
Q psy12938 378 -----GA--------DA------------------GL--------------EKLGIFVKTITEAGAAARDGRIQVRRGPK 412 (612)
Q Consensus 378 -----~~--------~~------------------~~--------------~~~~i~i~~i~~~~~a~~dg~l~~~~~~~ 412 (612)
+. .. .. ...|+||..|.++++|++.|+|+.+|--.
T Consensus 82 ~~~~~g~~v~l~v~R~~~~~~~~~~~~~~v~l~~~~~~~lG~~~~~~~~~~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~ 161 (196)
T 1p1d_A 82 RDSSITSKVTLEIEFDVAESVIPSSGTFHVKLPKKHSVELGITISSPSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLL 161 (196)
T ss_dssp HTCCSSSEEEEEEEECSCSCCBCCSSCEEEEECCCSSCCCCCEEECSCSSSTTCCCEEEECCSSSHHHHTSCCCTTCEEE
T ss_pred HhCCCCCeEEEEEEecCCCCCCCCCCcEEEEecCCCCCCcCEEEECCCCCCCCCCEEEEEECCCCcHHhcCCCCCCCEEE
Confidence 00 00 00 04688999999999999999999888543
Q ss_pred c
Q psy12938 413 G 413 (612)
Q Consensus 413 g 413 (612)
.
T Consensus 162 ~ 162 (196)
T 1p1d_A 162 A 162 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 170
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.73 E-value=2.1e-08 Score=91.73 Aligned_cols=84 Identities=15% Similarity=0.243 Sum_probs=65.2
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch----------------------hchhhhCCCCCCcE
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG----------------------DHFSATFKTSGLPA 555 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~----------------------d~~~~~~~i~~lPt 555 (612)
+.+++|+||++||+.|+.+.+.|..++++ .++.|+.|+.+..+ ..+...|.+..+|+
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 120 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPE 120 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCE
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCe
Confidence 45899999999999999999999999888 67999998754211 14567899999995
Q ss_pred E-EEEECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 556 M-LAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 556 l-lvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
+ ++.++|+.+..+.|.... ++++.+|.
T Consensus 121 ~~~id~~G~i~~~~~g~~~~-------~~l~~~l~ 148 (156)
T 1kng_A 121 TFVVGREGTIVYKLVGPITP-------DNLRSVLL 148 (156)
T ss_dssp EEEECTTSBEEEEEESCCCH-------HHHHHTHH
T ss_pred EEEEcCCCCEEEEEeCCCCH-------HHHHHHHH
Confidence 5 555999999988876333 55555554
No 171
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.72 E-value=9.7e-09 Score=89.18 Aligned_cols=65 Identities=38% Similarity=0.684 Sum_probs=55.2
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.++|.| |+..||||+|.| +.+....+.|+||..|.+||+|++.|+|++|| |||.++.++++.
T Consensus 9 ~~~~~~v~l-~~~~glG~~i~~---~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~ 77 (106)
T 3axa_A 9 EPEIITVTL-KKQNGMGLSIVA---AKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQE 77 (106)
T ss_dssp -CCEEEEEE-ECSSSCSEEEEE---EECSSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHH
T ss_pred CceEEEEEE-CCCCccCEEEEe---ecCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 346778999 888999999999 55444466799999999999999999999999 899999987663
No 172
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.71 E-value=7.9e-09 Score=90.20 Aligned_cols=64 Identities=23% Similarity=0.323 Sum_probs=54.6
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCC-CccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGL-EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~-~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
++++|.|.|++.||||+|.| +.+... .+.|+||.+|.+||+|+++|+|++|| |||.++.++++.
T Consensus 15 ~~~~v~l~k~~~glG~~i~~---~~~~~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 83 (108)
T 2d92_A 15 EVKIVELVKDCKGLGFSILD---YQDPLDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLA 83 (108)
T ss_dssp SCEEEEEEECSSCCSEEEEE---EECSSCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHH
T ss_pred ceEEEEEEECCCccCEEEec---ccccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 45679999999999999999 444222 45799999999999999999999999 999999987663
No 173
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.71 E-value=1.8e-08 Score=95.37 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=66.1
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--c------eEEEecCCC-chhchhhhC--------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--V------KFVSVPLGC-VGDHFSATF-------------------- 548 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--v------kF~ki~~~~-~~d~~~~~~-------------------- 548 (612)
+.+|||+||++||++|+.+.+.|.+++++|.+ + .|+.|+.+. .+ ....+|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSR-DIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCH-HHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCH-HHHHHHHHHcCCCccEEECCcchHHH
Confidence 45899999999999999999999999999853 7 999999876 33 333443
Q ss_pred -----CCCCCcE-EEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 549 -----KTSGLPA-MLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 549 -----~i~~lPt-llvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
.+..+|+ +++.++|+++..+.|.. +.++|+.+|.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~ 178 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREV-------TSKDVLDVALP 178 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCC-------CHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCC-------CHHHHHHHHHH
Confidence 6889995 55569999999887652 44777777754
No 174
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.71 E-value=1.1e-08 Score=89.08 Aligned_cols=66 Identities=35% Similarity=0.567 Sum_probs=57.7
Q ss_pred ceeEEEEEEeeCCCCcceEEE-----eccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSII-----GMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~-----g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.++|.|.|+..||||+|. | |.+....+.|+||.+|.++|+|++.|+|++|| |||.++.++++.
T Consensus 7 ~~~~~~v~l~k~~~~lG~~i~~~~~~g---g~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 81 (108)
T 1q7x_A 7 PGDIFEVELAKNDNSLGISVTVLFDKG---GVNTSVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHK 81 (108)
T ss_dssp SSSEEEEEEESSSCSCCEEESSSSSSB---CBCTTSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTS
T ss_pred CCcEEEEEEEECCCCccEEEEEeccCC---CccccCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 346788999999999999999 8 66655556799999999999999999999999 899999987663
No 175
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.70 E-value=3e-08 Score=90.48 Aligned_cols=85 Identities=14% Similarity=0.191 Sum_probs=68.4
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecC-----------------------CCchhchhhhCCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPL-----------------------GCVGDHFSATFKTSG 552 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~-----------------------~~~~d~~~~~~~i~~ 552 (612)
+.++||.||++||+.|+.+.+.|.+++++|+ ++.|+.|.. +... .+...|.+..
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~i~~ 106 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADK-AVGQAFGTQV 106 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSC-HHHHHHTCCS
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchH-HHHHHcCCCc
Confidence 4489999999999999999999999999996 488887653 2222 4678899999
Q ss_pred CcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 553 LPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 553 lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+|+++++ ++|+++..+.|.. +.+.|+.+|.+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~ 138 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEP-------DFGKLYQEIDT 138 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSC-------CHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCC-------CHHHHHHHHHH
Confidence 9999999 8999999888753 33667766654
No 176
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.67 E-value=2.8e-08 Score=89.61 Aligned_cols=85 Identities=11% Similarity=0.214 Sum_probs=67.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHH---HHhhcC--CceEEEecCCCchhc---------------------h--hhhC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAE---LSRSHT--NVKFVSVPLGCVGDH---------------------F--SATF 548 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~---LA~~~~--~vkF~ki~~~~~~d~---------------------~--~~~~ 548 (612)
++.+|+|+||++||++|+.+.+.|.+ |+++|. ++.|+.|+.+...+. + ...|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 35589999999999999999999988 888884 599999987743211 1 2389
Q ss_pred CCCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 549 KTSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 549 ~i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.+..+|+++++ ++|+++.+ ..+.++|+.+|.+.
T Consensus 106 ~v~~~P~~~lid~~G~i~~~----------~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRVILK----------DTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBEEEC----------SCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCEEec----------CCCHHHHHHHHHHH
Confidence 99999999999 79998762 24568999998753
No 177
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.67 E-value=2.8e-08 Score=85.35 Aligned_cols=64 Identities=38% Similarity=0.612 Sum_probs=55.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
...++|.|.|+..||||+|.| |.+... .+.|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 6 ~~~~~v~l~~~~~~lG~~l~~---g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 75 (101)
T 2jik_A 6 VTEEEINLTRGPSGLGFNIVG---GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLH 75 (101)
T ss_dssp EEEEEEEEECCTTCCCEEEEE---CTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred CccEEEEEEeCCCCCCEEEec---cccCCCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 456789999999999999999 555432 35699999999999999999999999 89999988755
No 178
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.67 E-value=3.4e-08 Score=81.32 Aligned_cols=74 Identities=15% Similarity=0.328 Sum_probs=59.9
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch---hchhhhCC--CCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG---DHFSATFK--TSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~---d~~~~~~~--i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
|+.|+++||+.|+.+.+.|++|+.+|+++.|..+|.+..+ +.+.+.+. +..+|++ |.+|+.++. +
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~~---~----- 72 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIGG---Y----- 72 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEES---S-----
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEEC---H-----
Confidence 6779999999999999999999999989999999875322 25777888 8999998 669987652 1
Q ss_pred CCCCHHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLVE 590 (612)
Q Consensus 577 ~~~~~~~lE~~L~~ 590 (612)
++|..+|.+
T Consensus 73 -----~~l~~~~~~ 81 (85)
T 1ego_A 73 -----TDFAAWVKE 81 (85)
T ss_dssp -----HHHHHHHHH
T ss_pred -----HHHHHHHHH
Confidence 677777754
No 179
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.66 E-value=2.3e-08 Score=94.96 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=57.4
Q ss_pred CceEEEEEeCCCChhhhhhHH-HH--HHHHhhcC-CceEEEecCCCchhchhhhC--------CCCCCcEEEEEE-CCEE
Q psy12938 498 HITVIAHLSSPSLPACRALNS-SL--AELSRSHT-NVKFVSVPLGCVGDHFSATF--------KTSGLPAMLAYR-GGEV 564 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~-~l--~~LA~~~~-~vkF~ki~~~~~~d~~~~~~--------~i~~lPtllvyk-~G~~ 564 (612)
+.+|+|+||++||++|+.|.+ .| .++++.+. ++.|++||.+..+ .+...| .+.++||+++|+ +|+.
T Consensus 39 ~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~-~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 39 NKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERP-DIDNIYMTVCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCH-HHHHHHHHHHHHHHSCCCSSEEEEECTTSCE
T ss_pred CCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccC-cHHHHHHHHHHHHcCCCCCcceeeECCCCCc
Confidence 448999999999999999998 33 46666553 5889999999776 676777 899999999997 9998
Q ss_pred eeE
Q psy12938 565 VGN 567 (612)
Q Consensus 565 ~~~ 567 (612)
+..
T Consensus 118 v~~ 120 (173)
T 3ira_A 118 FFA 120 (173)
T ss_dssp EEE
T ss_pred eee
Confidence 875
No 180
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.65 E-value=5.6e-08 Score=88.38 Aligned_cols=72 Identities=19% Similarity=0.282 Sum_probs=61.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCch-----------------------hchhhhCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVG-----------------------DHFSATFKTS 551 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~-----------------------d~~~~~~~i~ 551 (612)
+.+|+|+||++||++|+.+.+.|.+++++|. ++.|+.|+.+... ..+...|.+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 4589999999999999999999999999987 6889988876421 2567889999
Q ss_pred CCcEEEEEE--CCEEeeEEE
Q psy12938 552 GLPAMLAYR--GGEVVGNFV 569 (612)
Q Consensus 552 ~lPtllvyk--~G~~~~~~v 569 (612)
.+||+++|. +|+++.+..
T Consensus 108 ~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 108 SIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp SSSEEEEEETTTCCEEESCH
T ss_pred CCCEEEEEECCCCeEEEecc
Confidence 999999997 999888653
No 181
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.65 E-value=6.1e-08 Score=87.79 Aligned_cols=71 Identities=17% Similarity=0.369 Sum_probs=60.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCch-----------------------hchhhhCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVG-----------------------DHFSATFKTS 551 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~-----------------------d~~~~~~~i~ 551 (612)
+.+|+|+||++||++|+.+.+.|.+++++|+ ++.|+.|+.+... ..+...|.+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 4589999999999999999999999999997 5889988877421 2567899999
Q ss_pred CCcEEEEEE--CCEEeeEE
Q psy12938 552 GLPAMLAYR--GGEVVGNF 568 (612)
Q Consensus 552 ~lPtllvyk--~G~~~~~~ 568 (612)
.+|+++++. +|+++.+.
T Consensus 108 ~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 108 SIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp SSSEEEEEETTTCCEEESC
T ss_pred CCCEEEEEECCCCcEEecc
Confidence 999999995 99988754
No 182
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.65 E-value=2.7e-08 Score=85.54 Aligned_cols=79 Identities=14% Similarity=0.232 Sum_probs=62.9
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC--CchhchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG--CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~--~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
....+|+.|+++||+.|+.+.+.|++|+.. +.|.++|++ ..+ ++..+|. ..+|+| |++|+.+ .+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~---i~~~~vdi~~~~~~-el~~~~g-~~vP~l--~~~g~~~-~~~----- 80 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR---FILQEVDITLPENS-TWYERYK-FDIPVF--HLNGQFL-MMH----- 80 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS---SEEEEEETTSSTTH-HHHHHSS-SSCSEE--EESSSEE-EES-----
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC---CeEEEEECCCcchH-HHHHHHC-CCCCEE--EECCEEE-Eec-----
Confidence 345688899999999999999999988654 899999987 554 7788999 999976 6798865 122
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
++..+.|+.+|.++
T Consensus 81 ---g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 81 ---RVNTSKLEKQLRKL 94 (100)
T ss_dssp ---SCCHHHHHHHHHSS
T ss_pred ---CCCHHHHHHHHHHH
Confidence 25668999999643
No 183
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.65 E-value=6.3e-08 Score=107.51 Aligned_cols=79 Identities=15% Similarity=0.187 Sum_probs=68.7
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCC
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGY 579 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~ 579 (612)
..|+.||++||++|+.+.+.|+++|.+|++++|.+||.+..+ +++++|.++.+||+++ ||+.+.. |. .
T Consensus 119 ~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~~~-~~~~~~~i~svPt~~i--~g~~~~~--G~-------~ 186 (521)
T 1hyu_A 119 FEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHTAIDGGTFQ-NEITERNVMGVPAVFV--NGKEFGQ--GR-------M 186 (521)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEEEEETTTCH-HHHHHTTCCSSSEEEE--TTEEEEE--SC-------C
T ss_pred cceEEEECCCCcCcHHHHHHHHHHHhHcCceEEEEEechhhH-HHHHHhCCCccCEEEE--CCEEEec--CC-------C
Confidence 678999999999999999999999999999999999999887 7889999999999988 9998864 43 3
Q ss_pred CHHHHHHHHHH
Q psy12938 580 FVEDVEAFLVE 590 (612)
Q Consensus 580 ~~~~lE~~L~~ 590 (612)
..++|..+|.+
T Consensus 187 ~~~~l~~~l~~ 197 (521)
T 1hyu_A 187 TLTEIVAKVDT 197 (521)
T ss_dssp CHHHHHHHHCC
T ss_pred CHHHHHHHHhh
Confidence 44777777643
No 184
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=2.2e-08 Score=86.81 Aligned_cols=60 Identities=28% Similarity=0.326 Sum_probs=51.5
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..|.|.|+..||||+|.| +.+.. .+++||.+|.++|+|+++|+|++|| |||.++.+++|.
T Consensus 8 ~~v~l~k~~~glG~~i~g---g~~~~--~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~ 71 (103)
T 1ufx_A 8 TLVRVKKSAATLGIAIEG---GANTR--QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHR 71 (103)
T ss_dssp EEEEEECCSSSCCEEEEC---BTTSS--CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHH
T ss_pred EEEEEEcCCCcCCeEEEC---CCCCC--CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 458889999999999999 55532 2456999999999999999999999 899999998773
No 185
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.64 E-value=1.5e-08 Score=91.10 Aligned_cols=66 Identities=21% Similarity=0.328 Sum_probs=57.4
Q ss_pred ceeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeee-ecccc
Q psy12938 310 KLTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSII-GMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~-g~~~~ 378 (612)
..++.+|.|.|+. .||||+|.| +.+...++.|+||..|.+||+|++.|+|++|| |||.++. ++++.
T Consensus 23 ~~~~~~v~l~k~~~~~lG~~i~g---~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~ 94 (128)
T 2db5_A 23 GRQIEYIDIERPSTGGLGFSVVA---LRSQNLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQ 94 (128)
T ss_dssp TCEEEEEEEECCSSSCCCCEEEE---EECSSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHH
T ss_pred cCceEEEEEEECCCCccCEEEec---ccCCCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHH
Confidence 4577889999997 699999999 56555566799999999999999999999999 8999997 87764
No 186
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.64 E-value=3.7e-08 Score=90.67 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=64.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCCchh----------------------chhhhCCCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGCVGD----------------------HFSATFKTSGL 553 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~~~d----------------------~~~~~~~i~~l 553 (612)
+.+|+|.||++||++|+.+.+.|.+++++|.+ +.|+.|+.+.... .+...|.+..+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 44899999999999999999999999999964 9999998775431 16788999999
Q ss_pred cEEEEE-ECCEEeeEEEecc
Q psy12938 554 PAMLAY-RGGEVVGNFVRLG 572 (612)
Q Consensus 554 Ptllvy-k~G~~~~~~vg~~ 572 (612)
|+++++ ++|+++..+.|..
T Consensus 115 P~~~lid~~G~i~~~~~g~~ 134 (152)
T 2lrt_A 115 PSVFLVNRNNELSARGENIK 134 (152)
T ss_dssp SEEEEEETTTEEEEETTTCS
T ss_pred ceEEEECCCCeEEEecCCHH
Confidence 999999 7999999877653
No 187
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.64 E-value=1.3e-08 Score=88.93 Aligned_cols=64 Identities=28% Similarity=0.459 Sum_probs=54.4
Q ss_pred eeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 311 LTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 311 ~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.++++|.|.|.. .||||+|.| +.+. ..+.|+||.+|.+||+|+++|+|++|| |||.++.+++|.
T Consensus 4 ~~~~~v~l~k~~~~~lG~~i~g---~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 72 (108)
T 3cbz_A 4 MNIITVTLNMEKYNFLGISIVG---QSNE-RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSND 72 (108)
T ss_dssp CCEEEEEECHHHHCCCCEEEEE---ECSS-TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHH
T ss_pred ceEEEEEEEeCCCCccCEEEEc---CcCC-CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH
Confidence 467889999854 899999999 4432 246799999999999999999999999 899999998764
No 188
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.64 E-value=6.7e-08 Score=90.42 Aligned_cols=72 Identities=18% Similarity=0.366 Sum_probs=61.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCch-----------------------hchhhhCCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVG-----------------------DHFSATFKT 550 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~-----------------------d~~~~~~~i 550 (612)
++.+|||.||++||++|+.+.+.|.+|+++|+ +++|+.|+.+... ..+...|.+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 34589999999999999999999999999996 4889988876541 257789999
Q ss_pred CCCcEEEEEE--CCEEeeEE
Q psy12938 551 SGLPAMLAYR--GGEVVGNF 568 (612)
Q Consensus 551 ~~lPtllvyk--~G~~~~~~ 568 (612)
..+||+++|. +|+++.+.
T Consensus 127 ~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 127 ESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp CSSSEEEEEETTTCCEEESC
T ss_pred CCCCEEEEEeCCCCEEEecc
Confidence 9999999998 49988854
No 189
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.64 E-value=5.8e-08 Score=95.40 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=61.5
Q ss_pred eEEEEEe-----CCCChhhhhhHHHHHHHHhhc---CCceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEec
Q psy12938 500 TVIAHLS-----SPSLPACRALNSSLAELSRSH---TNVKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRL 571 (612)
Q Consensus 500 ~Vvvhfy-----~~~~~~C~~m~~~l~~LA~~~---~~vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~ 571 (612)
+|+|.|| ++||++|+.+.+.++++|+++ +.++|.+||.+..+ .+..+|++.++|||++|++|....++.|.
T Consensus 22 ~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~-~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~ 100 (229)
T 2ywm_A 22 PVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHK-EETEKYGVDRVPTIVIEGDKDYGIRYIGL 100 (229)
T ss_dssp CEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCH-HHHHHTTCCBSSEEEEESSSCCCEEEESC
T ss_pred CeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccH-HHHHHcCCCcCcEEEEECCCcccceecCC
Confidence 3555555 889999999999999998776 46999999998776 78899999999999999998888888886
Q ss_pred c
Q psy12938 572 G 572 (612)
Q Consensus 572 ~ 572 (612)
.
T Consensus 101 ~ 101 (229)
T 2ywm_A 101 P 101 (229)
T ss_dssp C
T ss_pred c
Confidence 3
No 190
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.64 E-value=3.2e-08 Score=83.12 Aligned_cols=60 Identities=28% Similarity=0.501 Sum_probs=51.9
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|+..||||++.| +.+. ..++||..|.++|+|++.|+|++|| |||.++.++++
T Consensus 2 ~~~~v~l~~~~~g~G~~~~~---g~~~---~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 65 (90)
T 2q9v_A 2 MEQDIFLWRKETGFGFRILG---GNEP---GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSH 65 (90)
T ss_dssp EEEEEEEECBTTBCCEEEEE---CSST---TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCH
T ss_pred CcEEEEEEECCCccCEEEEc---cccC---CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 34679999999999999999 5442 3479999999999999999999999 89999988665
No 191
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.63 E-value=1e-08 Score=91.45 Aligned_cols=64 Identities=33% Similarity=0.501 Sum_probs=52.0
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+++|.|.|+. .||||+|.| |.+....+.|+||.+|.+||+|++.|.|++|| |||.++.++++.
T Consensus 24 ~~~~v~l~k~~~~~lGf~i~g---g~~~~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~ 92 (120)
T 2iwo_A 24 GLRTVEMKKGPTDSLGISIAG---GVGSPLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHT 92 (120)
T ss_dssp -CEEEEEEC----CCCEEEEE---EEEETTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHH
T ss_pred CcEEEEEEcCCCCCCCEEEec---ccCCCCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHH
Confidence 56779999998 499999999 55544456799999999999999997799999 999999997663
No 192
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.63 E-value=5.9e-08 Score=87.67 Aligned_cols=71 Identities=24% Similarity=0.433 Sum_probs=60.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC---CceEEEecCCCch-----------------------hchhhhCCCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT---NVKFVSVPLGCVG-----------------------DHFSATFKTS 551 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~---~vkF~ki~~~~~~-----------------------d~~~~~~~i~ 551 (612)
+.+|+|+||++||++|+.+.+.|.+++++|+ ++.|+.|+.+... ..+...|.+.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 4589999999999999999999999999987 6888888877421 1467889999
Q ss_pred CCcEEEEEE--CCEEeeEE
Q psy12938 552 GLPAMLAYR--GGEVVGNF 568 (612)
Q Consensus 552 ~lPtllvyk--~G~~~~~~ 568 (612)
.+||++++. +|+++...
T Consensus 108 ~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 108 SIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp SSSEEEEEETTTCCEEESC
T ss_pred CCCEEEEEECCCCeEEecc
Confidence 999999998 89988754
No 193
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.63 E-value=7e-08 Score=88.12 Aligned_cols=73 Identities=11% Similarity=0.237 Sum_probs=63.1
Q ss_pred CCceEEEEEeCCCChh--hhhhHHHHHHHHhhc---CCceEEEecCCCch------------------------hchhhh
Q psy12938 497 RHITVIAHLSSPSLPA--CRALNSSLAELSRSH---TNVKFVSVPLGCVG------------------------DHFSAT 547 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~--C~~m~~~l~~LA~~~---~~vkF~ki~~~~~~------------------------d~~~~~ 547 (612)
++.+|+|+||++||++ |+.+.+.|.+++++| .++.|+.|+.+..+ ..+...
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3568999999999999 999999999999998 45999999877432 156788
Q ss_pred CCCCCCcEEEEE-ECCEEeeEEE
Q psy12938 548 FKTSGLPAMLAY-RGGEVVGNFV 569 (612)
Q Consensus 548 ~~i~~lPtllvy-k~G~~~~~~v 569 (612)
|.+..+|+++++ ++|+++..++
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~ 134 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL 134 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC
T ss_pred cCCCccCeEEEECCCCEEEEccC
Confidence 999999999999 8999998764
No 194
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.63 E-value=4.4e-08 Score=88.70 Aligned_cols=83 Identities=12% Similarity=0.080 Sum_probs=66.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCch-------------------------hchhhhCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVG-------------------------DHFSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~-------------------------d~~~~~~~ 549 (612)
++.+|+|+||++||++|+.+.+.|.++.++|+ ++.|+.|+.+... ..+...|.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 45689999999999999999999999999996 4999998776321 13557899
Q ss_pred CCCCcEEEEEE-CCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 550 TSGLPAMLAYR-GGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 550 i~~lPtllvyk-~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
+..+|+++++. +|+++.+.++ .++++.+|.
T Consensus 111 v~~~P~~~lid~~G~i~~~~~~----------~~~l~~~l~ 141 (143)
T 4fo5_A 111 LRKGFKNFLINDEGVIIAANVT----------PEKLTEILK 141 (143)
T ss_dssp GGGCCCEEEECTTSBEEEESCC----------HHHHHHHHT
T ss_pred CCCCCcEEEECCCCEEEEccCC----------HHHHHHHHH
Confidence 99999888775 9999886432 377888875
No 195
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.62 E-value=3.5e-08 Score=84.10 Aligned_cols=64 Identities=23% Similarity=0.441 Sum_probs=54.1
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC-CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL-EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~-~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++.++|.|.|+..||||+|.+ +.+... ...|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 2 ~~~~~v~l~k~~~~lG~~i~~---~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~ 70 (97)
T 2jil_A 2 MRTVEVTLHKEGNTFGFVIRG---GAHDDRNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTH 70 (97)
T ss_dssp EEEEEEEEECBTTBCSEEEEE---ECCSCC--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCH
T ss_pred ceEEEEEEEeCCCccCEEEeC---cccCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 456789999999999999999 544321 35699999999999999999999999 89999998655
No 196
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.62 E-value=5.8e-08 Score=97.07 Aligned_cols=69 Identities=13% Similarity=0.140 Sum_probs=62.4
Q ss_pred ceEEEEEeCCC--ChhhhhhHHHHHHHHhhcCC------ceEEEecCCCchhchhhhCCCCCCcEEEEEECCEEeeEEEe
Q psy12938 499 ITVIAHLSSPS--LPACRALNSSLAELSRSHTN------VKFVSVPLGCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVR 570 (612)
Q Consensus 499 ~~Vvvhfy~~~--~~~C~~m~~~l~~LA~~~~~------vkF~ki~~~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg 570 (612)
.+|+|+||++| |+.|+.|.+.|++||+.++. ++|+++|++..+ .+..+|.++.+|||++| +| ..++.|
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~-~~~~~~gv~~~Pt~~i~-~g--~~~~~G 101 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDS-DKFSEFKVERVPTVAFL-GG--EVRWTG 101 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTH-HHHHHTTCCSSSEEEET-TT--TEEEES
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCH-HHHHhcCCCcCCEEEEE-CC--ceeEcC
Confidence 37999999999 99999999999999999876 999999998776 68899999999999999 77 666777
Q ss_pred c
Q psy12938 571 L 571 (612)
Q Consensus 571 ~ 571 (612)
.
T Consensus 102 ~ 102 (243)
T 2hls_A 102 I 102 (243)
T ss_dssp C
T ss_pred C
Confidence 6
No 197
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=2.9e-08 Score=86.07 Aligned_cols=64 Identities=33% Similarity=0.438 Sum_probs=55.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCC---CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAG---LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~---~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|+..||||+|.| +.++. .++.|+||..|.++|+|++.|+|++|| |||.++.++++
T Consensus 6 ~~~~~v~l~~~~~glG~~l~~---g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 76 (105)
T 1wha_A 6 SGRHVACLARSERGLGFSIAG---GKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARH 76 (105)
T ss_dssp CEEEEEEECCCTTCCSCEEEC---CTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCH
T ss_pred CeeEEEEEEeCCCccCEEEEe---ccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 467789999999999999999 55532 245799999999999999999999999 89999998765
No 198
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.60 E-value=4.2e-08 Score=81.44 Aligned_cols=58 Identities=22% Similarity=0.465 Sum_probs=50.8
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++|+|.|+..||||++.+ +.+ ...|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 2 ~~v~l~k~~~g~G~~i~~---~~~---~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 63 (85)
T 2i04_A 2 IHTKLRKSSRGFGFTVVG---GDE---PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH 63 (85)
T ss_dssp EEEEEECBTTBSSEEEEE---CCS---TTBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred EEEEEEECCCCCCEEEEc---ccC---CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 468999999999999999 433 34589999999999999999999999 89999988655
No 199
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.58 E-value=6.4e-08 Score=86.56 Aligned_cols=66 Identities=33% Similarity=0.411 Sum_probs=56.9
Q ss_pred hccceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 307 RVEKLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 307 ~~~~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.....++++|.|.|+..||||+|.| +.+. ...|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 20 ~~~~~~~~~v~l~k~~~glG~~l~~---~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~ 89 (124)
T 2daz_A 20 ADLPGELHIIELEKDKNGLGLSLAG---NKDR--SRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSH 89 (124)
T ss_dssp TTSSSEEEEEEEECCSSCCCEEEEC---BSST--TSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCH
T ss_pred ccCCCceEEEEEEeCCCccCEEEec---cCCC--CcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3445678899999999999999999 5443 24699999999999999999999999 89999988766
No 200
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=5.7e-08 Score=84.49 Aligned_cols=65 Identities=31% Similarity=0.455 Sum_probs=54.6
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCC-----CCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADA-----GLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~-----~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.++|.|.|+..||||+|.| +.+. ...+.|+||.+|.++|+|++.|.|++|| |||.++.++++
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g---~~~~~~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~ 79 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIG---GRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATH 79 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEEC---CCSCCCCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCH
T ss_pred CcEEEEEEEEeCCCccCEEEEc---CCCCcccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3467889999999999999999 4432 1135699999999999999996699999 89999988766
No 201
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.57 E-value=2.5e-07 Score=87.57 Aligned_cols=88 Identities=18% Similarity=0.257 Sum_probs=67.7
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc-h---hchhhhCCCC--------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV-G---DHFSATFKTS-------------------- 551 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~-~---d~~~~~~~i~-------------------- 551 (612)
+.+|+++||++||+.|+.+.+.|.+++++|. ++.|+.|+.+.. + ..+.+++.+.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 4589999999999999999999999999986 699999887632 0 1234555553
Q ss_pred ---CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 552 ---GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 552 ---~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
++|+++++ ++|+++..+.|... ...++|+.+|.+
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~-----~~~~~l~~~l~~ 177 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAE-----WASEDALKLIRA 177 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCC-----TTSHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCc-----cCHHHHHHHHHH
Confidence 89999998 89999999987632 233566666653
No 202
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=8.1e-08 Score=85.32 Aligned_cols=64 Identities=38% Similarity=0.612 Sum_probs=55.0
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
...++|.|.|+..||||+|.+ +.+... ...|+||..|.++++|++.|+|++|| |||.++.++++
T Consensus 16 ~~~~~v~l~r~~~~lG~~i~~---~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 85 (120)
T 2eno_A 16 VTEEEINLTRGPSGLGFNIVG---GTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLH 85 (120)
T ss_dssp EEEEEEEEECCSSSCSEEEEC---CTTTCSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCH
T ss_pred CceEEEEEEECCCCCCEEEec---ccCCccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 356779999999999999999 554322 35699999999999999999999999 89999998764
No 203
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.57 E-value=3e-08 Score=87.66 Aligned_cols=66 Identities=32% Similarity=0.474 Sum_probs=55.9
Q ss_pred cceeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeee-eccc
Q psy12938 309 EKLTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSII-GMGV 377 (612)
Q Consensus 309 ~~~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~-g~~~ 377 (612)
....+++|.|.|.. .||||+|.| +.+....+.|+||.+|.+||+|++.|+|++|| |||.++. ++++
T Consensus 17 ~~~~~~~v~l~k~~~~~lG~~i~~---~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~ 88 (117)
T 2o2t_A 17 QGRHVEVFELLKPPSGGLGFSVVG---LRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITH 88 (117)
T ss_dssp TTSCEEEEEEECCSSSCSSCCEEE---EECCC--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCH
T ss_pred cCCeEEEEEEEECCCCCCCEEEee---cccCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCH
Confidence 44678899999985 889999999 55544456799999999999999999999999 8999998 7765
No 204
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.56 E-value=1.2e-07 Score=99.96 Aligned_cols=75 Identities=12% Similarity=0.041 Sum_probs=63.4
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc--------------------------hhchhhhCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV--------------------------GDHFSATFK 549 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~--------------------------~d~~~~~~~ 549 (612)
..+|||+||++||++|+.+.+.|.+|+++|+ +++|+.|+.+.. ...+...|.
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 4589999999999999999999999999996 499999975421 014667899
Q ss_pred CCCCcEEEEE-ECCEEeeEEEecc
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLG 572 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~ 572 (612)
+..+|+++++ ++|+++..+.|..
T Consensus 162 V~~~Pt~~lID~~G~Iv~~~~G~~ 185 (352)
T 2hyx_A 162 NRYWPAEYLIDATGTVRHIKFGEG 185 (352)
T ss_dssp CCEESEEEEECTTSBEEEEEESBC
T ss_pred CCccCEEEEEeCCCeEEEEEcCCC
Confidence 9999998888 9999999998853
No 205
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.56 E-value=3.8e-08 Score=85.06 Aligned_cols=63 Identities=27% Similarity=0.498 Sum_probs=54.3
Q ss_pred cceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 309 EKLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 309 ~~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++.++|.|.|+..||||+|.+ +.+ ...++||.+|.++|+|++.|+|++|| |||.++.++++
T Consensus 6 ~~~~~~~v~l~~~~~g~G~~i~~---g~~---~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~ 72 (103)
T 1uep_A 6 SGYKELDVHLRRMESGFGFRILG---GDE---PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTH 72 (103)
T ss_dssp SSEEEECCEEESSSSSCCEEECC---CCS---TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCH
T ss_pred CCceEEEEEEEeCCCccCEEEee---ecC---CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 34567779999999999999998 443 24589999999999999999999999 89999988665
No 206
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.56 E-value=4.3e-08 Score=85.24 Aligned_cols=62 Identities=32% Similarity=0.486 Sum_probs=46.5
Q ss_pred EEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 316 VELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 316 v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+..+..+|||+|.| |.+.....++.|+||..|.+||+|++.|+|++|| |||.++.++++.
T Consensus 6 ~~~~~~~~~~Gf~i~g-G~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~ 71 (106)
T 4amh_A 6 HLVPRGSKGLGFSIAG-GVGNQHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHE 71 (106)
T ss_dssp ------CCCSCEEEEE-CTTSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHH
T ss_pred ccCCCCCCccCEEEEe-ccCCccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 3445566899999999 3333322256699999999999999999999999 899999887663
No 207
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.56 E-value=7.5e-08 Score=81.71 Aligned_cols=60 Identities=30% Similarity=0.476 Sum_probs=51.9
Q ss_pred eeEEEEEEeeCC--CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGA--EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~--~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+++++|.|.|.. .||||+|.+ +.+ ..|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 2 ~~~~~v~l~k~~~~~~lG~~~~~---~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 67 (95)
T 2vwr_A 2 MEILQVALHKRDSGEQLGIKLVR---RTD----EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTP 67 (95)
T ss_dssp EEEEEEEEECSSTTCCCCEEEEE---CSS----SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEEEEECCCCCcccEEEEe---ccC----CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 467889999964 689999998 433 3589999999999999999999999 89999988655
No 208
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.55 E-value=5.5e-08 Score=82.28 Aligned_cols=60 Identities=27% Similarity=0.320 Sum_probs=52.2
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+..|.|.|+..||||++.+ +. .+.++||.+|.+||+|++.|+|++|| |||.++.++++.
T Consensus 4 ~~r~v~l~k~~~~lG~~i~~---~~----~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~ 67 (93)
T 3o46_A 4 SVKIIRLVKNREPLGATIKK---DE----QTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPE 67 (93)
T ss_dssp CCEEEEEEESSSCCCEEEEE---CT----TTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHH
T ss_pred cEEEEEEEeCCCCccEEEEe---cC----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 45679999999999999999 31 24589999999999999999999999 999999887763
No 209
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.54 E-value=4.4e-08 Score=100.39 Aligned_cols=73 Identities=8% Similarity=0.079 Sum_probs=55.8
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEec---C-CCchhchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVP---L-GCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~---~-~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
.+|.||++||++|+.+.|.|+++|++++ ++.++ . ++.+ ++.++|+++++||+++ ||+. +.|..+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~---~Vd~d~~d~~~~~~-~la~~~gI~~vPT~~i--~G~~---~~G~~~--- 267 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP---YVECSPNGPGTPQA-QECTEAGITSYPTWII--NGRT---YTGVRS--- 267 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC---EEESCSSCSSSCCC-HHHHTTTCCSTTEEEE--TTEE---EESCCC---
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC---EEEEeecCchhhHH-HHHHHcCCcccCeEEE--CCEE---ecCCCC---
Confidence 4689999999999999999999998875 45554 3 3243 6889999999999655 9974 555533
Q ss_pred CCCCHHHHHHHHH
Q psy12938 577 EGYFVEDVEAFLV 589 (612)
Q Consensus 577 ~~~~~~~lE~~L~ 589 (612)
.++|++++.
T Consensus 268 ----~~~L~~~l~ 276 (291)
T 3kp9_A 268 ----LEALAVASG 276 (291)
T ss_dssp ----HHHHHHHTC
T ss_pred ----HHHHHHHHC
Confidence 377777763
No 210
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.54 E-value=1.3e-07 Score=89.22 Aligned_cols=72 Identities=15% Similarity=0.243 Sum_probs=59.3
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC-----------------------chhchhhhCCCCCCc
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC-----------------------VGDHFSATFKTSGLP 554 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~-----------------------~~d~~~~~~~i~~lP 554 (612)
+.+|||.||++||++|+.+.+.|.+++++ ++.|+.|+.+. .. .+...|.+..+|
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~~P 134 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADG-TLGLDLGVYGAP 134 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTC-HHHHHHTCCSSC
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcc-hHHHHcCCCCCC
Confidence 45899999999999999999999999988 78999887421 11 456789999999
Q ss_pred EEEEE-ECCEEeeEEEecc
Q psy12938 555 AMLAY-RGGEVVGNFVRLG 572 (612)
Q Consensus 555 tllvy-k~G~~~~~~vg~~ 572 (612)
+++++ ++|+++..+.|..
T Consensus 135 ~~~lid~~G~i~~~~~g~~ 153 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVV 153 (176)
T ss_dssp EEEEECTTCBEEEEEESCC
T ss_pred eEEEECCCCeEEEEEcCCC
Confidence 65555 8999999998863
No 211
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.53 E-value=6.2e-08 Score=87.64 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=53.2
Q ss_pred eEEEEEEeeC----------CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKG----------AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~----------~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+..+.|.|. ..+|||+|.| |.+...++.|+||.+|.+||+|+++|+|++|| |||.++.+++|
T Consensus 27 ~i~~v~l~~~~~~~~i~k~~~~~lG~~i~g---g~~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~ 103 (131)
T 1wfg_A 27 LIGRILLNKRLKDGSVPRDSGAMLGLKVVG---GKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATF 103 (131)
T ss_dssp EEEEEEEECSCTTSCCCSCSCTTTTEEEEE---EEECSSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCH
T ss_pred eeeEEEEeccceeEEEecCCCCCCCEEEec---CccCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3455677665 4789999999 55555567799999999999999999999999 89999998766
Q ss_pred c
Q psy12938 378 G 378 (612)
Q Consensus 378 ~ 378 (612)
.
T Consensus 104 ~ 104 (131)
T 1wfg_A 104 E 104 (131)
T ss_dssp H
T ss_pred H
Confidence 3
No 212
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.53 E-value=1.9e-07 Score=88.66 Aligned_cols=70 Identities=10% Similarity=0.148 Sum_probs=60.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecCC-----------------------------Cchhchhh
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPLG-----------------------------CVGDHFSA 546 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~-----------------------------~~~d~~~~ 546 (612)
+..+|||+||++||+.|+.+.+.|.+|+++|.+ +.|+.|+.+ ... .+..
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~-~~~~ 110 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQ-EVAK 110 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSS-HHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcc-hHHH
Confidence 345899999999999999999999999999977 999999863 122 4678
Q ss_pred hCCCCCCcEEEEE-ECCEEeeE
Q psy12938 547 TFKTSGLPAMLAY-RGGEVVGN 567 (612)
Q Consensus 547 ~~~i~~lPtllvy-k~G~~~~~ 567 (612)
.|.+..+|+++++ ++|+++..
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~ 132 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLLRYH 132 (188)
T ss_dssp HTTCCEESEEEEECTTCBEEEE
T ss_pred HcCCCCCCeEEEECCCCcEEEE
Confidence 8999999999999 89998876
No 213
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=6.2e-08 Score=85.76 Aligned_cols=64 Identities=19% Similarity=0.450 Sum_probs=53.8
Q ss_pred eEEEEEEeeCC-------CCcceEEEeccCCCCCC--CCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGA-------EGLGLSIIGMGVGADAG--LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~-------~glG~si~g~~~g~~~~--~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
...+|.|.|.. .||||+|.| +.+.+ .+..|+||.+|.++|+|++.|+|++|| |||.++.+++|.
T Consensus 12 ~~~~v~l~r~~~~~~~~~~glG~~i~g---~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~ 88 (117)
T 1ujd_A 12 PHARIKITRDSKDHTVSGNGLGIRIVG---GKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYE 88 (117)
T ss_dssp CEEEEEECCCSSSSCSSCCSCSEEEEE---EEECSSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHH
T ss_pred ceEEEEEEecCcccCCCCCcccEEEeC---CCCCCcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH
Confidence 44568899987 799999999 44432 245699999999999999999999999 999999997763
No 214
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.52 E-value=9.7e-08 Score=78.11 Aligned_cols=62 Identities=15% Similarity=0.195 Sum_probs=51.7
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCC-CchhchhhhCCCCCCcEEEEEECCEEe
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLG-CVGDHFSATFKTSGLPAMLAYRGGEVV 565 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~-~~~d~~~~~~~i~~lPtllvyk~G~~~ 565 (612)
-++-||++||++|+.+.+.|+++++++. .++|++|+.+ ... .+..+|.++.+||+++ ||+.+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~gv~~vPt~~i--~g~~~ 66 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARI-AEAEKAGVKSVPALVI--DGAAF 66 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTH-HHHHHHTCCEEEEEEE--TTEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhH-HHHHHcCCCcCCEEEE--CCEEE
Confidence 3667999999999999999999998874 5778888865 333 5778999999999987 99865
No 215
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.51 E-value=1.2e-07 Score=90.51 Aligned_cols=68 Identities=13% Similarity=0.215 Sum_probs=58.5
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC-----------------------------CchhchhhhC
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG-----------------------------CVGDHFSATF 548 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~-----------------------------~~~d~~~~~~ 548 (612)
+|||+||++||+.|+.+.+.|.+++++|. ++.|+.|+.+ ... .+...|
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~ 126 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQ-EVAKAY 126 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSC-HHHHHH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCch-HHHHHh
Confidence 59999999999999999999999999986 4999999873 122 467889
Q ss_pred CCCCCcEEEEE-ECCEEeeEE
Q psy12938 549 KTSGLPAMLAY-RGGEVVGNF 568 (612)
Q Consensus 549 ~i~~lPtllvy-k~G~~~~~~ 568 (612)
.+..+|+++++ ++|+++...
T Consensus 127 ~v~~~P~~~lid~~G~i~~~~ 147 (196)
T 2ywi_A 127 DAACTPDFYIFDRDLKCVYRG 147 (196)
T ss_dssp TCCEESEEEEEETTCBEEEEE
T ss_pred CCCCCCeEEEEcCCCeEEEcc
Confidence 99999999999 799998864
No 216
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.50 E-value=8e-08 Score=83.66 Aligned_cols=58 Identities=22% Similarity=0.366 Sum_probs=50.5
Q ss_pred eEEEEEEee-CCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMK-GAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k-~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
+.++|+|.| ...||||++.+ .+.|++|.+|.+||+|++.|+|++|| |||.++.++++.
T Consensus 2 ~~~~v~L~k~~~~glG~~i~~---------~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~ 64 (106)
T 2la8_A 2 EKFNVDLMKKAGKELGLSLSP---------NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQ 64 (106)
T ss_dssp EEEEEEECCBSSSTTCCEEEE---------CSSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHH
T ss_pred eEEEEEEEeCCCCccCEEEEe---------CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 578899985 45899999988 34589999999999999999999999 899999987653
No 217
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=1.2e-07 Score=84.78 Aligned_cols=63 Identities=30% Similarity=0.485 Sum_probs=54.4
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.++|.|.|+..||||+|.| +.+ .+.|+||..|.++|+|++.|+|++|| |||..+.++++.
T Consensus 17 ~~~~~~v~l~~~~~glG~~~~~---g~~---~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~ 83 (123)
T 1ueq_A 17 KGTFLSTTLKKSNMGFGFTIIG---GDE---PDEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA 83 (123)
T ss_dssp CSEEEEEEEECCTTSCSEEEEC---CSS---SSCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH
T ss_pred CCcEEEEEEEeCCCceeEEEec---ccC---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 3467789999999999999998 443 34589999999999999999999999 899999987653
No 218
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.50 E-value=9.7e-08 Score=83.82 Aligned_cols=62 Identities=29% Similarity=0.542 Sum_probs=53.2
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.++|.|.|+..||||+|.+ +.+ ...|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 22 ~~~~~~v~l~~~~~glG~~l~~---~~~---~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 87 (112)
T 2r4h_A 22 SMDFYTVELERGAKGFGFSLRG---GRE---YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKH 87 (112)
T ss_dssp -CCEEEEEEECBTTBTSEEEEE---CGG---GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCH
T ss_pred CCceEEEEEEcCCCccCEEEec---ccc---CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3467789999999999999999 443 24589999999999999999999999 89999988654
No 219
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.50 E-value=3e-08 Score=89.19 Aligned_cols=63 Identities=35% Similarity=0.578 Sum_probs=52.1
Q ss_pred eEEEEEEe-eCCCCcceEEEeccCCCCCC-CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELM-KGAEGLGLSIIGMGVGADAG-LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~-k~~~glG~si~g~~~g~~~~-~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++|.|. ++..||||+|.| +.+.. ..+.||||.+|.+||+|+++|+|++|| |||.++.+++|
T Consensus 25 ~~~~v~l~k~~~~glG~~i~~---~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~ 93 (127)
T 1wg6_A 25 LTLEIPLNDSGSAGLGVSLKG---NKSRETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSN 93 (127)
T ss_dssp EEEEEECSSSTTTCCCCEEEE---EEETTTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCH
T ss_pred eEEEEEEeeCCCCccCeEEec---ccCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 45668887 566899999999 43321 135699999999999999999999999 89999999876
No 220
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.49 E-value=8.1e-08 Score=81.95 Aligned_cols=63 Identities=25% Similarity=0.335 Sum_probs=52.8
Q ss_pred eEEEEEEee-CCCCcceEEEeccCCCCCCC---CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMK-GAEGLGLSIIGMGVGADAGL---EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k-~~~glG~si~g~~~g~~~~~---~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+|.|.| +..||||+|.+ +.+... ...|++|..|.++|+|++.|+|++|| |||..+.++++
T Consensus 5 ~~~~v~l~k~~~~glG~~i~~---~~~~~~~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 75 (98)
T 1ihj_A 5 LIHMVTLDKTGKKSFGICIVR---GEVKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTE 75 (98)
T ss_dssp EEEEEEEECTTSSSCCEEEEE---EEECCSSSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCH
T ss_pred eEEEEEEEeCCCCCcCEEEec---cccCCccccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 356799999 66899999999 444332 35699999999999999999999999 89999988655
No 221
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.48 E-value=1.5e-07 Score=80.20 Aligned_cols=61 Identities=34% Similarity=0.537 Sum_probs=52.6
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|+..||||+|.+ +.+.. ..|+||.+|.++|+|++.|+|++|| |||.++.++++
T Consensus 4 ~~~~v~l~~~~~~lG~~l~~---~~~~~--~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 68 (98)
T 2opg_A 4 CETTIEISKGRTGLGLSIVG---GSDTL--LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATH 68 (98)
T ss_dssp EEEEEEEECBTTBTCEEEEE---CTTST--TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CEEEEEEEECCCcccEEEec---CCCCC--CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 45679999999999999999 54432 2489999999999999999999999 89999988654
No 222
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.47 E-value=1.2e-07 Score=79.77 Aligned_cols=60 Identities=33% Similarity=0.524 Sum_probs=51.4
Q ss_pred eeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|.. .||||++.+ +.+ ..|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 3 ~~~~~v~l~k~~~~~lG~~~~~---~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 67 (92)
T 2qg1_A 3 SDTLTIGLQKKPGKGLGLSIVG---KRN----DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQ 67 (92)
T ss_dssp -CEEEEEEECCTTSCCSEEEEC---CSS----SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEeCCCCcccEEEEe---ccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 457889999975 899999998 332 3589999999999999999999999 89999988654
No 223
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.47 E-value=1.2e-07 Score=83.70 Aligned_cols=63 Identities=25% Similarity=0.399 Sum_probs=52.9
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCC------CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAG------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++|.|.|+. .+|||+|.| +.+.. ....|+||..|.++|+|++.|+|++|| |||.++.++++
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~g---g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 88 (117)
T 2ehr_A 15 PPRIVEIFREPNVSLGISIVG---GQTVIKRLKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASH 88 (117)
T ss_dssp CCEEEEECCCSSSCCCEEECC---CCSCCCSSCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCH
T ss_pred CCEEEEEEeCCCCccCEEEeC---CcccccccccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 34669999985 899999999 54432 134699999999999999999999999 89999988765
No 224
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.47 E-value=1.5e-07 Score=81.84 Aligned_cols=65 Identities=38% Similarity=0.547 Sum_probs=53.7
Q ss_pred ceeEEEEEE--eeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVEL--MKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l--~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.++|.| .+...||||+|.+ +.+... .+.|++|..|.+|++|++.|+|++|| |||.++.++++
T Consensus 10 ~~~~~~v~l~r~~~~~~lG~~~~~---~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 82 (108)
T 2jre_A 10 GFSLYSVELFREKDTSSLGISISG---MRDQSTTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQ 82 (108)
T ss_dssp SCEEEEEEEECCSTTSCCSEEEEC---CCCCSCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCH
T ss_pred CcEEEEEEEEecCCCCCcCEEEEc---ccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 356778999 5666899999999 544332 45699999999999999999999999 89999988654
No 225
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.46 E-value=2.1e-07 Score=81.30 Aligned_cols=65 Identities=34% Similarity=0.459 Sum_probs=54.9
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.+.+.|.++..||||+|.+ +.+...+..|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 9 ~~~~~~~~l~~~~~glG~~~~~---~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~ 77 (111)
T 2koj_A 9 VGKRLNIQLKKGTEGLGFSITS---RDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQ 77 (111)
T ss_dssp SCEEEEEEEECBTTBTCEEEEE---CSCSSSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCH
T ss_pred cCcEEEEEEEECCCccCEEEEe---ccCCCCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 3456779999999999999999 44433345799999999999999999999999 89999987654
No 226
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.84 E-value=2e-08 Score=90.48 Aligned_cols=69 Identities=17% Similarity=0.334 Sum_probs=59.0
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhc----CCceEEEecCCCch------------------------hchhhhCCCC
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSH----TNVKFVSVPLGCVG------------------------DHFSATFKTS 551 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~----~~vkF~ki~~~~~~------------------------d~~~~~~~i~ 551 (612)
+|+|+||++||++|+.+.+.|.+++++| +++.|+.|+.+..+ ..+...|.+.
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT 107 (143)
Confidence 7999999999999999999999999998 57888888766331 1467789999
Q ss_pred CCcEEEEEE-CCEEeeEE
Q psy12938 552 GLPAMLAYR-GGEVVGNF 568 (612)
Q Consensus 552 ~lPtllvyk-~G~~~~~~ 568 (612)
.+|+++++. +|+++...
T Consensus 108 ~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 108 GIPALVIVKKDGTLISMN 125 (143)
Confidence 999999997 99998863
No 227
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.46 E-value=9.4e-08 Score=82.18 Aligned_cols=88 Identities=18% Similarity=0.327 Sum_probs=63.9
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC----chhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC----VGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~----~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
|+.|+++||+.|+.+.+.|+.++..|++..++.|+.+. ..+.+...+.+..+|++ |.+|+.++.+-.+...
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~~~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i~g~~~~~~~--- 88 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKEGLLEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECIGGCTDLESM--- 88 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCTTSEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEEESHHHHHHH---
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCCCccEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEEeccHHHHHH---
Confidence 55699999999999999999998888766666665542 11246678899999997 6699887654322221
Q ss_pred CCCHHHHHHHHHHCCccc
Q psy12938 578 GYFVEDVEAFLVEAGLLR 595 (612)
Q Consensus 578 ~~~~~~lE~~L~~~g~l~ 595 (612)
.....|+.+|...|+|+
T Consensus 89 -~~~g~L~~~l~~~g~~~ 105 (105)
T 1kte_A 89 -HKRGELLTRLQQVGAVK 105 (105)
T ss_dssp -HHHTHHHHHHHHHTCBC
T ss_pred -HHCCcHHHHHHHcCCCC
Confidence 11267899999988874
No 228
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.45 E-value=1.1e-07 Score=85.76 Aligned_cols=61 Identities=21% Similarity=0.430 Sum_probs=53.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|+..||||+|.| +.+ ...|+||.+|.+||+|++.|+|++|| |||.++.+++|
T Consensus 17 g~~~~v~l~~~~~g~G~~i~g---~~~---~~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~ 81 (129)
T 2kpk_A 17 GKFIHTKLRKSSRGFGFTVVG---GDE---PDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTH 81 (129)
T ss_dssp SEEEEEEEEECSSCCSEEEEE---EEE---TTEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCH
T ss_pred CcEEEEEEEECCCcccEEEeC---ccC---CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 466789999999999999999 333 24589999999999999999999999 89999998765
No 229
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.44 E-value=1.7e-07 Score=84.28 Aligned_cols=66 Identities=30% Similarity=0.478 Sum_probs=54.8
Q ss_pred ceeEEEEEEee-CCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMK-GAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k-~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.++|.|.| ...||||+|.+ +.+... ...|+||..|.+||+|++.|+|++|| |||.++.++++.
T Consensus 13 ~~~~~~v~l~~~~~~~lG~~i~~---~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~ 85 (129)
T 2dmz_A 13 LFETYNVELVRKDGQSLGIRIVG---YVGTSHTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANH 85 (129)
T ss_dssp CEEEEEEEECCCTTCCCCEEEEE---ECCCSSSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHH
T ss_pred CCcEEEEEEEeCCCCCcCEEEEe---ecCCcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 45778899965 66899999999 444333 45699999999999999999999999 899999987653
No 230
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.44 E-value=1.8e-07 Score=82.95 Aligned_cols=62 Identities=34% Similarity=0.402 Sum_probs=51.9
Q ss_pred eEEEEEEeeC-CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKG-AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~-~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+..|.|.|. ..||||+|.| +.+. ...|+||..|.++|+|++.|+|++|| |||..+.++++.
T Consensus 15 ~~~~v~l~~~~~~~lG~~i~g---~~~~--~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~ 81 (119)
T 1x6d_A 15 GIHVTILHKEEGAGLGFSLAG---GADL--ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHH 81 (119)
T ss_dssp TEEEEEEECCTTSCCSEEEEC---CSSS--SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHH
T ss_pred CeEEEEEEeCCCCccCEEEeC---CCCC--CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3566888885 5899999999 5543 24589999999999999999999999 899999987663
No 231
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.82 E-value=2.4e-08 Score=92.11 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=64.5
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHH-HHhhcC---CceEEEecCCCchhchhhhCC------------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAE-LSRSHT---NVKFVSVPLGCVGDHFSATFK------------------------ 549 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~-LA~~~~---~vkF~ki~~~~~~d~~~~~~~------------------------ 549 (612)
+.+|+|.||++||++|+.+.+.|.+ +..+|. +++|+.|+.+..+ ....+|.
T Consensus 33 gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 33 GKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPL-EKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 4489999999999999999999998 888876 6999999876432 2233333
Q ss_pred CCCCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 550 TSGLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 550 i~~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+.++|+++++ ++|+++..+.|+ +.++++.+|.+.
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g~--------~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRLY--------NEEEFASLVQQI 146 (159)
Confidence 5679999999 999999988764 224566666543
No 232
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.43 E-value=1.1e-07 Score=83.12 Aligned_cols=62 Identities=35% Similarity=0.537 Sum_probs=51.8
Q ss_pred EEEEEeeCC-CCcceEEEeccCCCCCC------CCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 314 LGVELMKGA-EGLGLSIIGMGVGADAG------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 314 ~~v~l~k~~-~glG~si~g~~~g~~~~------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
++|.|.|+. .+|||+|.| +.+.. ....|+||..|.++|+|++.|+|++|| |||.++.++++.
T Consensus 11 ~~v~l~k~~~~~lG~~i~g---g~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 83 (111)
T 1uju_A 11 RELCIQKAPGERLGISIRG---GARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHG 83 (111)
T ss_dssp SCEEEECCTTCCCCEEEEC---CSSSSCSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHH
T ss_pred EEEEEEECCCCccCEEEEC---CccccccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 448899987 899999999 44321 235699999999999999999999999 899999987663
No 233
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.42 E-value=2.2e-07 Score=78.11 Aligned_cols=58 Identities=21% Similarity=0.318 Sum_probs=50.6
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+..+|.|.|++.||||++.+ +.+ ..|+||.+|.+||+|++.| |++|| |||.++.++++
T Consensus 3 ~~r~v~l~r~~~g~G~~~~~---~~~----~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 64 (91)
T 1g9o_A 3 LPRLCCLEKGPNGYGFHLHG---EKG----KLGQYIRLVEPGSPAEKAG-LLAGDRLVEVNGENVEKETH 64 (91)
T ss_dssp CCEEEEEECBTTBCCEEEEE---CTT----CSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred ccEEEEEEeCCCcccEEEEe---cCC----CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 34569999999999999999 332 3589999999999999999 99999 89999998765
No 234
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.42 E-value=1.7e-07 Score=80.84 Aligned_cols=59 Identities=25% Similarity=0.498 Sum_probs=51.4
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+...|.|.|+..||||+|.+ +.+ ..|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 11 ~~~~v~l~k~~~glG~~~~~---~~~----~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 73 (104)
T 3i4w_A 11 EPRRIVIHRGSTGLGFNIVG---GEX----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH 73 (104)
T ss_dssp SCEEEEEECBTTBTSEEEEE---CC-----CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCH
T ss_pred ccEEEEEEeCCCccCEEEEC---CCC----CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 45679999999999999999 433 2489999999999999999999999 89999988665
No 235
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=2.1e-07 Score=78.05 Aligned_cols=58 Identities=22% Similarity=0.269 Sum_probs=49.9
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
+..|.|.|++ .+|||+|.+ + ++.+++|.+|.+||+|++++.|++|| |||.++.++++.
T Consensus 2 ~r~V~l~K~~~~~lG~~i~~---~-----~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~ 64 (88)
T 1kwa_A 2 SRLVQFQKNTDEPMGITLKM---N-----ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVE 64 (88)
T ss_dssp CEEEEEEECSSSCCCEEEEC---S-----CGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHH
T ss_pred eEEEEEEeCCCCceeEEEEe---C-----CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 3569999996 899999998 2 13479999999999999977799999 999999998774
No 236
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.41 E-value=2.6e-07 Score=78.42 Aligned_cols=47 Identities=21% Similarity=0.302 Sum_probs=41.9
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCC--CceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTS--GLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~--~~v~l~v~R~~~ 97 (612)
..|.|++||+|++|||+++.+++|.+++++|++.+ .+++|++.+++.
T Consensus 43 r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~~ 91 (95)
T 3gge_A 43 SVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKK 91 (95)
T ss_dssp HCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEECS
T ss_pred hcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECccc
Confidence 34699999999999999999999999999999964 589999988765
No 237
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.41 E-value=2.4e-07 Score=78.91 Aligned_cols=61 Identities=26% Similarity=0.331 Sum_probs=52.0
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++++|.|.|...||||+|.+ +.+ ...|++|..|.+|++|++.|+|++|| |||.++.++++
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~---~~~---~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 68 (97)
T 1n7e_A 4 AIIYTVELKRYGGPLGITISG---TEE---PFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPL 68 (97)
T ss_dssp CCEEEEEEECTTSCCCEEEEC---CSS---TTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEeCCCCcCEEEEc---ccC---CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 457889999988889999998 332 12489999999999999999999999 89999987654
No 238
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.40 E-value=3.2e-07 Score=77.96 Aligned_cols=63 Identities=30% Similarity=0.589 Sum_probs=52.9
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC---CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL---EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~---~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++.+++.+.+...||||+|.+ |.+... ...|++|..|.+||+|++.| |++|| |||..+.++.+
T Consensus 2 ~~~~~v~~~~~~~glG~~i~~---g~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 71 (97)
T 2w4f_A 2 MEELTLTILRQTGGLGISIAG---GKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEH 71 (97)
T ss_dssp -CEEEEEEECBTTBSSEEEEE---CTTSCCSBTTBCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred ceEEEEEEEeCCCceeEEEEC---CccCCcccCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 355779999999999999999 554322 45699999999999999999 99999 89999988654
No 239
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.40 E-value=7.1e-07 Score=82.90 Aligned_cols=75 Identities=17% Similarity=0.131 Sum_probs=60.6
Q ss_pred CCceEEEEEeCCCChh-hhhhHHHHHHHHhhc------CCceEEEecCCCc---h------------------------h
Q psy12938 497 RHITVIAHLSSPSLPA-CRALNSSLAELSRSH------TNVKFVSVPLGCV---G------------------------D 542 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~-C~~m~~~l~~LA~~~------~~vkF~ki~~~~~---~------------------------d 542 (612)
++.+|||+||++||++ |+.+.+.|.+++++| .+++|+.|..+.. + .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3458999999999998 999999999999988 4799998877621 0 0
Q ss_pred chhhhCCCCCCc---------------E-EEEEECCEEeeEEEec
Q psy12938 543 HFSATFKTSGLP---------------A-MLAYRGGEVVGNFVRL 571 (612)
Q Consensus 543 ~~~~~~~i~~lP---------------t-llvyk~G~~~~~~vg~ 571 (612)
.+...|.+...| + +++.++|+++..+.|.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~ 149 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRS 149 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESS
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCC
Confidence 356789998888 4 5666999999988764
No 240
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.39 E-value=4.1e-07 Score=77.11 Aligned_cols=62 Identities=29% Similarity=0.404 Sum_probs=48.8
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++|.|.|+. +|||+|.|+....+.+. .+.|+||.+|.++|+|++ | |++|| |||.++.++++
T Consensus 4 ~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~ 71 (95)
T 1mfg_A 4 EIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 71 (95)
T ss_dssp EEEEEEECSS-SCSEEEEECBTSCCCSSSTTCCCEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCBH
T ss_pred EEEEEECCCC-CCCEEEeCCcCccCCccccCCCCEEEEEECCCCchhh-C-CCCCCEEEEECCEEcCCCCH
Confidence 3568888887 89999999211112222 456999999999999999 6 99999 89999988665
No 241
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.38 E-value=9.1e-07 Score=81.96 Aligned_cols=70 Identities=9% Similarity=0.096 Sum_probs=60.7
Q ss_pred eEEEEEe-CCCChhhhhhHHHHHHHHhhcC--CceEEEecCCC---------------------chhchhhhCCCCC---
Q psy12938 500 TVIAHLS-SPSLPACRALNSSLAELSRSHT--NVKFVSVPLGC---------------------VGDHFSATFKTSG--- 552 (612)
Q Consensus 500 ~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~---------------------~~d~~~~~~~i~~--- 552 (612)
+||+.|| ++||++|+...+.|.+++++|. ++.|+.|..+. .. .+...|.+.+
T Consensus 31 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~~~~ 109 (161)
T 3drn_A 31 NIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDK-KIRELYGAKGFIL 109 (161)
T ss_dssp EEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTS-HHHHHTTCCCSSS
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcH-HHHHHcCCCCcCc
Confidence 3999999 9999999999999999999995 49999988762 22 5678899999
Q ss_pred -CcEEEEE-ECCEEeeEEEe
Q psy12938 553 -LPAMLAY-RGGEVVGNFVR 570 (612)
Q Consensus 553 -lPtllvy-k~G~~~~~~vg 570 (612)
+|+++++ ++|+++..+.|
T Consensus 110 ~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 110 PARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp CCCEEEEECTTSBEEEEEEC
T ss_pred ccceEEEECCCCEEEEEEec
Confidence 9988877 79999999888
No 242
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.38 E-value=1.9e-07 Score=81.06 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=53.0
Q ss_pred ceeEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccC-Cccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDG-RIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dg-rl~~gD----vng~~~~g~~~ 377 (612)
...+..|.|.|+. .+|||++.| +.+ ...++||..|.+||+|++.| ||++|| |||.++.++++
T Consensus 15 ~~~~~~v~l~~~~~~~~G~~~~g---g~~---~~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~ 82 (107)
T 3nfk_A 15 HDNLVLIRMKPDENGRFGFNVKG---GYD---QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 82 (107)
T ss_dssp -CCCEEEEECCCTTSCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCH
T ss_pred CCCEEEEEEEcCCCCCCCEEEEc---cCC---CCCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCH
Confidence 3457789999988 899999999 443 23589999999999999999 799999 89999998766
No 243
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.38 E-value=3.8e-07 Score=81.52 Aligned_cols=61 Identities=30% Similarity=0.300 Sum_probs=52.1
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
...+|.|.|.. .+|||+|.| |.+ ...++||.+|.+||+|++.|+|++|| |||.++.+++|.
T Consensus 19 ~~~~v~l~k~~~~~lG~~i~g---g~~---~~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~ 84 (125)
T 3hpk_A 19 VPGKVTLQKDAQNLIGISIGG---GAQ---YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKV 84 (125)
T ss_dssp EEEEEEEECCTTSCCCEEEEE---CSS---CCSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH
T ss_pred CCeEEEEEeCCCCCcCEEEec---cCC---CCCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 45678898876 689999999 544 23589999999999999999999999 899999987763
No 244
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.38 E-value=1.9e-07 Score=79.62 Aligned_cols=59 Identities=24% Similarity=0.388 Sum_probs=50.7
Q ss_pred ceeEEEEEEee-CCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMK-GAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k-~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.+++.|.| ...||||++.+ ...|++|.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~---------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~ 69 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSP---------NEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF 69 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEE---------CSSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCH
T ss_pred HCceEEEEEEeCCCCCccEEEEe---------CCCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 45667899976 45799999988 23589999999999999999999999 89999998765
No 245
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.37 E-value=1.2e-06 Score=80.67 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=70.4
Q ss_pred eEEEEEe-CCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc----------------------hhchhhhCCCC---
Q psy12938 500 TVIAHLS-SPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV----------------------GDHFSATFKTS--- 551 (612)
Q Consensus 500 ~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~----------------------~d~~~~~~~i~--- 551 (612)
+||++|| ++||+.|+.+.+.|.+++++|. ++.|+.|..+.. ...+...|.+.
T Consensus 38 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~ 117 (160)
T 1xvw_A 38 NVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQ 117 (160)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETT
T ss_pred CEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcccc
Confidence 8999998 9999999999999999999994 699999877531 12467889998
Q ss_pred -CCc---EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 552 -GLP---AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 552 -~lP---tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
++| ++++.++|+++..+.|.. +..-..+++.+.|.+.
T Consensus 118 ~~~p~~~~~lid~~G~i~~~~~g~~---~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 118 AGIANRGTFVVDRSGIIRFAEMKQP---GEVRDQRLWTDALAAL 158 (160)
T ss_dssp TTEECSEEEEECTTSBEEEEEECCT---TCCCCHHHHHHHHHHT
T ss_pred CCCeeeeEEEECCCCeEEEEEecCC---CCCCCHHHHHHHHHHh
Confidence 999 667779999999988752 2334567777777653
No 246
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.37 E-value=3.6e-07 Score=77.40 Aligned_cols=64 Identities=39% Similarity=0.535 Sum_probs=53.1
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC-CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL-EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~-~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.++..||||++.+ +.+... ...|++|..|.+||+|++.|+|++|| |||..+.++++
T Consensus 3 ~~~~~v~l~~~~~~lG~~i~~---~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~ 71 (97)
T 2iwn_A 3 SETFDVELTKNVQGLGITIAG---YIGDKKLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTN 71 (97)
T ss_dssp EEEEEEEEECBTTBSCEEEEC---CCCC----CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCH
T ss_pred cEEEEEEEecCCCCCcEEEEc---cCCCCCCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 467889999999999999999 433222 34689999999999999999999999 89999988654
No 247
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.37 E-value=8.7e-07 Score=82.28 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=68.6
Q ss_pred CCceEEEEEeCCCChh-hhhhHHHHHHHHhhcC-----CceEEEecCCCc---h------------------------hc
Q psy12938 497 RHITVIAHLSSPSLPA-CRALNSSLAELSRSHT-----NVKFVSVPLGCV---G------------------------DH 543 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~-C~~m~~~l~~LA~~~~-----~vkF~ki~~~~~---~------------------------d~ 543 (612)
++.+|||+||++||++ |+.+.+.|.+++++|. ++.|+.|+.+.. + ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3458999999999997 9999999999999997 699999987631 0 02
Q ss_pred hhhhC---------------CCCCCcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 544 FSATF---------------KTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 544 ~~~~~---------------~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+...| .+..+|+++++.+|+++..+.|.. ..+.++|+..|.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~-----~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDK-----AEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHH-----HTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCC-----CCCHHHHHHHHHH
Confidence 33333 346789999999999999887764 1245778887765
No 248
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.36 E-value=2.3e-07 Score=77.89 Aligned_cols=60 Identities=27% Similarity=0.317 Sum_probs=50.5
Q ss_pred eEEEEEEeeC-CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKG-AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~-~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|. ..+|||++.+ +.+ .+.|+||.+|.++|+|++.|.|++|| |||.++.++++
T Consensus 4 ~~~~v~l~k~~~~~lG~~i~~---~~~---~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~ 68 (90)
T 1qav_A 4 QRRRVTVRKADAGGLGISIKG---GRE---NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATH 68 (90)
T ss_dssp SCEEEEEECCTTTCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCH
T ss_pred ccEEEEEEeCCCCCcCEEEEc---ccC---CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 3567999995 4899999999 443 24689999999999999996699999 89999998765
No 249
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.36 E-value=3.1e-07 Score=80.24 Aligned_cols=58 Identities=40% Similarity=0.667 Sum_probs=50.8
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+...|.|.|...||||+|.+ +. +.|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 15 ~~~~v~l~~~~~~lG~~l~~---~~-----~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (111)
T 2dlu_A 15 HVEEVELINDGSGLGFGIVG---GK-----TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTS 76 (111)
T ss_dssp EEEEEEEECCSSCCCEEEEC---CS-----SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCH
T ss_pred ceEEEEEEeCCCccCEEEec---cC-----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 45679999999999999998 32 2489999999999999999999999 89999988655
No 250
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.36 E-value=4.1e-07 Score=82.35 Aligned_cols=59 Identities=24% Similarity=0.368 Sum_probs=49.1
Q ss_pred EEEEeeCC-CCcceEEEeccCCCC---------CCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 315 GVELMKGA-EGLGLSIIGMGVGAD---------AGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 315 ~v~l~k~~-~glG~si~g~~~g~~---------~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+|.|.|.. .||||+|.| +.+ +.....|+||..|.+||+|++.| |++|| |||.++.++++
T Consensus 30 ~v~l~r~~~~g~Gf~i~g---~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 102 (132)
T 3l4f_D 30 TVLLQKKDSEGFGFVLRG---AKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 102 (132)
T ss_dssp EEEEECCTTSCCCEEEEE---ECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGT-CCTTCEEEEESSSBCTTSCH
T ss_pred EEEEEECCCCcEeEEEec---cCCCCccccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 58998854 899999999 333 12234589999999999999999 99999 89999998776
No 251
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.36 E-value=2.3e-07 Score=80.02 Aligned_cols=63 Identities=30% Similarity=0.462 Sum_probs=53.6
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|+..||||+|.+ +.+.. ++.+++|..|.++++|++.|+|++|| |||..+.++++
T Consensus 10 ~~~~~v~l~~~~~g~G~~l~~---~~~~~-~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 76 (104)
T 2djt_A 10 SGHFSVELVRGYAGFGLTLGG---GRDVA-GDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTH 76 (104)
T ss_dssp CCCEEEEEECCSSSCCEEEEC---CEETT-EECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCH
T ss_pred CceEEEEEEeCCCCccEEEEe---ccCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 356779999999999999999 44431 35689999999999999999999999 89999988654
No 252
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.35 E-value=3.2e-07 Score=77.30 Aligned_cols=58 Identities=33% Similarity=0.542 Sum_probs=50.4
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+|+|.|+..||||+|.+ +.+ .+.|++|..|.++++|++.|.|++|| |||.++.++++
T Consensus 7 r~v~l~k~~~glG~~l~~---~~~---~~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~ 68 (93)
T 2dkr_A 7 GVVELPKTDEGLGFNIMG---GKE---QNSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQH 68 (93)
T ss_dssp CEEEEECCTTCCCEEEEC---SSS---SSCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCH
T ss_pred EEEEEEeCCCCccEEEec---ccC---CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 459999999999999998 544 24589999999999999998899999 89999988654
No 253
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.35 E-value=2.2e-07 Score=77.38 Aligned_cols=59 Identities=29% Similarity=0.443 Sum_probs=49.4
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+++|.|.|.. .+|||++.| +.+ ...|+||.+|.|||+|++++.|++|| |||.++.++++
T Consensus 3 ~~~v~l~~~~~~~lG~~i~~---~~~---~~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~ 66 (87)
T 4e34_A 3 IRKVLLLKEDHEGLGISITG---GKE---HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKH 66 (87)
T ss_dssp CEEEEEECCTTBCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCH
T ss_pred EEEEEEEECCCCcccEEEEc---cCC---CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 4669999976 699999999 443 23579999999999999965599999 89999988765
No 254
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.35 E-value=2.4e-07 Score=76.83 Aligned_cols=53 Identities=21% Similarity=0.342 Sum_probs=46.7
Q ss_pred eEEEEEEeeCCC-CcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGAE-GLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~~-glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
+..+|.|.|++. +|||++.+ | +|.+|.+||+|++.| |++|| |||.++.|++|.
T Consensus 4 ~~r~v~l~k~~~g~~Gf~i~~---g----------~I~~v~~gspA~~aG-l~~GD~Il~VNG~~v~~~~~~ 61 (82)
T 1r6j_A 4 DPRTITMHKDSTGHVGFIFKN---G----------KITSIVKDSSAARNG-LLTEHNICEINGQNVIGLKDS 61 (82)
T ss_dssp CCEEEEEECCTTSCCCEEEET---T----------EEEEECTTSHHHHHT-CCSSEEEEEETTEECTTCCHH
T ss_pred ceEEEEEEECCCCCeEEEEEC---C----------EEEEecCCCHHHHcC-CCCCCEEEEECCEEcCCCCHH
Confidence 346799999984 69999988 2 489999999999999 99999 999999999884
No 255
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=3.5e-07 Score=80.79 Aligned_cols=64 Identities=22% Similarity=0.332 Sum_probs=53.1
Q ss_pred ceeEEEEEEeeCC-CCcceEEEeccCCCCCCC---CccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 310 KLTLLGVELMKGA-EGLGLSIIGMGVGADAGL---EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 310 ~~~~~~v~l~k~~-~glG~si~g~~~g~~~~~---~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.++|.|.|+. .||||+|.| +.++.. ++.|+||.+|.++|+|+ +.|++|| |||.++.+++|.
T Consensus 12 ~~~~~~v~l~k~~~~glG~~i~g---g~~~~~~~~~~~gv~V~~V~~~spA~--~gL~~GD~I~~Vng~~v~~~~~~ 83 (117)
T 2csj_A 12 IWEQYTVTLQKDSKRGFGIAVSG---GRDNPHFENGETSIVISDVLPGGPAD--GLLQENDRVVMVNGTPMEDVLHS 83 (117)
T ss_dssp EEEEEEEEEECCSSSTTCEEEEC---CSSCCCCSSCCCBCEEEEECTTSSHH--HHBCTTCEEEEESSCBCBTCCHH
T ss_pred cceEEEEEEEECCCCccCEEEeC---CcCCccccCCCCCEEEEEECCCCccc--ccCCCCCEEEEECCEECCCcCHH
Confidence 3467789999997 899999999 555433 46799999999999995 6699999 899999987663
No 256
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.34 E-value=2.7e-07 Score=79.71 Aligned_cols=60 Identities=28% Similarity=0.429 Sum_probs=50.2
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+|.|.|.. .||||+|.| +.+. ..|+||.+|.+||+|++.|.|++|| |||.++.++++
T Consensus 9 ~~~~v~l~~~~~~~lG~~l~~---g~~~---~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~ 73 (103)
T 2dc2_A 9 PIRKVLLLKEDHEGLGISITG---GKEH---GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKH 73 (103)
T ss_dssp CEEEEEEECCSSSCCCEEEEE---EGGG---TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCH
T ss_pred CcEEEEEEeCCCCccCEEEEe---ccCC---CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCH
Confidence 45668888766 799999999 4432 3589999999999999985599999 89999998766
No 257
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.33 E-value=1.9e-07 Score=83.92 Aligned_cols=58 Identities=26% Similarity=0.391 Sum_probs=51.5
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.+.|.|+..||||+|.+ .+.+++|.+|.+||||+++|+|++|| |||.++.|.++.
T Consensus 27 ~~~~~~l~k~~~glG~~i~~---------~~~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~ 88 (126)
T 1wif_A 27 KVIQTKLTVGNLGLGLVVIQ---------NGPYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLR 88 (126)
T ss_dssp CEEEEEEECCTTCCCCCEEE---------ETTEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHH
T ss_pred ceEEEEEecCCceEeEEEEc---------CCCcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHH
Confidence 46679999999999999998 34579999999999999999999999 899999876653
No 258
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.32 E-value=1.1e-07 Score=101.72 Aligned_cols=100 Identities=22% Similarity=0.324 Sum_probs=51.3
Q ss_pred ceeEEEEEEeeC-CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccccc-----
Q psy12938 310 KLTLLGVELMKG-AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVGA----- 379 (612)
Q Consensus 310 ~~~~~~v~l~k~-~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~~----- 379 (612)
...+..|.+.|. .++|||+|.+.+.| ....|+||.+|.|||+|++.|+|++|| |||.++.+++|..
T Consensus 202 ~~~~~~V~i~k~~ge~lG~~i~~~~~g----~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l 277 (388)
T 3suz_A 202 SENCKELQLEKHKGEILGVVVVESGWG----SILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGII 277 (388)
T ss_dssp SSCCEEEEECCCSSCCCCCCCBCC-------CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHT
T ss_pred cccceEEEEECCCCCceeEEEEecCCC----CcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 345667899887 47999999983222 134579999999999999999999999 8999998864422
Q ss_pred --------------------------CCCCcccc-----eEEEEeeccccccccCcceeccCCccc
Q psy12938 380 --------------------------DAGLEKLG-----IFVKTITEAGAAARDGRIQVRRGPKGV 414 (612)
Q Consensus 380 --------------------------~~~~~~~~-----i~i~~i~~~~~a~~dg~l~~~~~~~gv 414 (612)
.......| .||..|.+||+|++.| |+.||--..|
T Consensus 278 ~~~~~~~~v~l~v~r~~~~~~v~l~~~~~~~~lG~~i~~g~I~~V~~gs~A~~aG-L~~GD~Il~V 342 (388)
T 3suz_A 278 KGLKNQTQVKLNIVSCPPVTTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGG-VRVGHRIIEI 342 (388)
T ss_dssp TTCTTCSCEEEEEEECCSCC----------------------------------------------
T ss_pred HhccCCCccccccccccccceeeEeecCCCCccceEEecCEEEEeecCCHHHHcC-CCCCCEEEEE
Confidence 00011122 3788999999999999 9999854333
No 259
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.32 E-value=1.1e-06 Score=86.08 Aligned_cols=88 Identities=14% Similarity=0.204 Sum_probs=68.0
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCC-----------------------------CchhchhhhC
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLG-----------------------------CVGDHFSATF 548 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~-----------------------------~~~d~~~~~~ 548 (612)
.|||.||++||+.|+.+.+.|.+|+++|.. +.|+.|+.+ ... .+...|
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~-~~~~~~ 139 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQ-SVAKAY 139 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTC-HHHHHH
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCcc-HHHHHc
Confidence 499999999999999999999999999964 999999874 122 567889
Q ss_pred CCCCCcEEEEE-ECCEEeeEEEecccc----ccCCCCHHHHHHHHHH
Q psy12938 549 KTSGLPAMLAY-RGGEVVGNFVRLGEE----LGEGYFVEDVEAFLVE 590 (612)
Q Consensus 549 ~i~~lPtllvy-k~G~~~~~~vg~~~~----~g~~~~~~~lE~~L~~ 590 (612)
.+..+|+++++ ++|+++.+ |..+. .....+.++|+..|.+
T Consensus 140 ~v~~~P~~~liD~~G~i~~~--g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 140 GAACTPDFFLYDRERRLVYH--GQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp TCCEESEEEEECTTCBEEEE--ECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEe--ccccccccccccccCHHHHHHHHHH
Confidence 99999999999 89998743 32221 1123455777777755
No 260
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.32 E-value=1.2e-06 Score=80.59 Aligned_cols=85 Identities=11% Similarity=0.134 Sum_probs=65.5
Q ss_pred CceEEEEEeCCCChh-hhhhHHHHHHHHhhc------CCceEEEecCCCch---------------------------hc
Q psy12938 498 HITVIAHLSSPSLPA-CRALNSSLAELSRSH------TNVKFVSVPLGCVG---------------------------DH 543 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~-C~~m~~~l~~LA~~~------~~vkF~ki~~~~~~---------------------------d~ 543 (612)
+.+|+|.||++||++ |+...+.|.++.++| +++.|+.|..+... ..
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 102 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQ 102 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHH
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 458999999999998 999999999999887 37888888765311 02
Q ss_pred hhhhCCCCCCc----------------EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 544 FSATFKTSGLP----------------AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 544 ~~~~~~i~~lP----------------tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
+...|.+...| ++++.++|+++..+.|.. +.++|+..|.
T Consensus 103 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~ 157 (164)
T 2ggt_A 103 VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK-------RKGEIAASIA 157 (164)
T ss_dssp HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC-------CHHHHHHHHH
T ss_pred HHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC-------CHHHHHHHHH
Confidence 56789999999 666679999999886642 3355655554
No 261
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.31 E-value=4.4e-07 Score=75.70 Aligned_cols=58 Identities=22% Similarity=0.395 Sum_probs=49.4
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++|.| +++.+|||++.| |.+ ...+++|..|.+|++|++.| |++|| |||.++.++++
T Consensus 3 ~~~~v~l-~~~~~~G~~l~~---g~~---~~~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (88)
T 2uzc_A 3 SNYSVSL-VGPAPWGFRLQG---GKD---FNMPLTISSLKDGGKAAQAN-VRIGDVVLSIDGINAQGMTH 64 (88)
T ss_dssp CEEEEEE-ESSSCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEE-cCCCcccEEEEC---cCC---CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4567888 777899999999 444 24589999999999999999 99999 89999988754
No 262
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.31 E-value=6.2e-07 Score=76.77 Aligned_cols=57 Identities=19% Similarity=0.241 Sum_probs=49.0
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++.|.|.|.. .+|||++.. +. +.|++|.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 13 ~~~v~l~K~~~~~lG~~l~~---~~-----~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~ 74 (97)
T 2ejy_A 13 VRLIQFEKVTEEPMGICLKL---NE-----KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSV 74 (97)
T ss_dssp CEEEEEEECSSSCCSEEEEE---CT-----TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCS
T ss_pred cEEEEEEeCCCCCeeEEEEe---CC-----CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 4569999876 789999987 22 2489999999999999999999999 89999998665
No 263
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.30 E-value=1.5e-07 Score=82.64 Aligned_cols=87 Identities=20% Similarity=0.285 Sum_probs=61.7
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch------hchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG------DHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~------d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
.|+.|+++||+.|+.+.+.|+.++..++. |..++.+..+ +.+...+++..+|++ |.||+.++.+..+.+.
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v--~i~g~~igg~~~~~~~ 95 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKRGA--YEIVDIKEFKPENELRDYFEQITGGKTVPRI--FFGKTSIGGYSDLLEI 95 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCTTS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEE--EETTEEEESHHHHHHH
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCcCc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEeCcHHHHHH
Confidence 46669999999999999999987655543 6666655332 256778999999987 4499887754333221
Q ss_pred ccCCCCHHHHHHHHHHCCccc
Q psy12938 575 LGEGYFVEDVEAFLVEAGLLR 595 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~g~l~ 595 (612)
. ....|+.+|...|+|.
T Consensus 96 ~----~~~~L~~~L~~~g~~~ 112 (114)
T 2hze_A 96 D----NMDALGDILSSIGVLR 112 (114)
T ss_dssp H----HTTCHHHHHHHTTCBC
T ss_pred H----HCChHHHHHHHcCCee
Confidence 1 1145999999999864
No 264
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.29 E-value=5.9e-07 Score=75.29 Aligned_cols=57 Identities=21% Similarity=0.437 Sum_probs=49.9
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||++.+ +.+ ..|++|..|.+|++|++.| |++|| |||.++.+++|
T Consensus 5 ~r~v~l~k~~~g~G~~~~~---~~~----~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 65 (90)
T 2he4_A 5 PRLCHLRKGPQGYGFNLHS---DKS----RPGQYIRSVDPGSPAARSG-LRAQDRLIEVNGQNVEGLRH 65 (90)
T ss_dssp CEEEEEECBTTBCCEEEEE---CSS----SSSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTSCH
T ss_pred cEEEEEEECCCCccEEEEc---cCC----CCCEEEEEECCCChHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 4569999999999999999 332 3489999999999999999 99999 89999988755
No 265
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.29 E-value=4.3e-07 Score=78.25 Aligned_cols=63 Identities=29% Similarity=0.398 Sum_probs=50.0
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|+. ||||+|.|+..+.+.+. .+.|+||.+|.++|+|++ | |++|| |||.++.++++
T Consensus 11 ~~~~v~l~~~~-~lG~~i~gg~~~~~~p~~~~~~gv~V~~V~~~spA~~-g-L~~GD~I~~vng~~v~~~~~ 79 (103)
T 1n7t_A 11 QEIRVRVEKDP-ELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 79 (103)
T ss_dssp CCEEEEEECSS-CCCBEEEECTTSSBCSSCSSCCSEECCCBSSSSTTSS-S-CCTTCEEEEETTEECSSCCH
T ss_pred EEEEEEEccCC-CccEEEEcccCCCCCccccCCCCEEEEEECCCCchHH-C-CCCCCEEEEECCEECCCCCH
Confidence 45669999987 89999999322112222 456999999999999999 6 99999 89999988765
No 266
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=3.9e-07 Score=80.07 Aligned_cols=58 Identities=26% Similarity=0.374 Sum_probs=50.9
Q ss_pred eeEEEEEEeeCCC-CcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAE-GLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~-glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.+|.|.|... ||||++.+ .+.|+||..|.+||+|++.|.|++|| |||..+.++++
T Consensus 24 ~~~~~v~l~k~~~~~lG~~i~~---------~~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~ 86 (113)
T 1va8_A 24 ETVKIVRIEKARDIPLGATVRN---------EMDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDV 86 (113)
T ss_dssp EECEEEEEEECTTCCCCEEEEE---------CSSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCH
T ss_pred CceEEEEEEeCCCCceeEEEEe---------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3667799999996 99999998 24589999999999999999669999 89999998765
No 267
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=4.3e-07 Score=80.33 Aligned_cols=62 Identities=24% Similarity=0.244 Sum_probs=51.9
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
..+.|.|.|.. .+|||+|.+ +.+. ...++||.+|.+||+|++.|+|++|| |||.++.++++.
T Consensus 15 ~~~~v~l~k~~~~~lG~~i~~---~~~~--~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~ 81 (117)
T 1v62_A 15 GPLMVEIVKTPGSALGISLTT---TSLR--NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLL 81 (117)
T ss_dssp SSEEEEEECCTTCCCCCEEEE---ECCS--SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHH
T ss_pred CcEEEEEEcCCCCcccEEEEc---cCCC--CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 45669999987 799999999 4332 22359999999999999999999999 899999887663
No 268
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=4.4e-07 Score=80.35 Aligned_cols=60 Identities=18% Similarity=0.290 Sum_probs=50.7
Q ss_pred eEEEEEEeeCCC-CcceEEEeccCCCCCCCCccceEEEEeccCchhccc-CCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAE-GLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARD-GRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~-glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~d-grl~~gD----vng~~~~g~~~ 377 (612)
..++|.|.|+.. +|||+|.| +.+ .+.|+||.+|.+||+|++. |.|++|| |||.++.+++|
T Consensus 15 ~~~~v~l~k~~~~~~G~~l~g---g~~---~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~ 80 (119)
T 2cs5_A 15 NLVLIRMKPDENGRFGFNVKG---GYD---QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 80 (119)
T ss_dssp CCEEEEECCCSSSCCSEEEEE---EGG---GTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCH
T ss_pred CeEEEEEEeCCCCCcCEEEec---ccC---CCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCH
Confidence 456799999884 59999999 444 2458999999999999999 5599999 89999998766
No 269
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.27 E-value=1.2e-06 Score=75.79 Aligned_cols=62 Identities=23% Similarity=0.340 Sum_probs=51.4
Q ss_pred eeEEEEEEeeCC-CCcceEEEeccCCCCCCC---CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGA-EGLGLSIIGMGVGADAGL---EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~-~glG~si~g~~~g~~~~~---~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.++|.|.|+. .||||+|.| +.+.+. ++.|++|.+|.+|++|+ .| |++|| |||.++.++++
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~---~~~~~~~~~~~~gv~V~~V~~~spA~-ag-l~~GD~I~~vng~~v~~~~~ 75 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISG---GRDNPHFQSGETSIVISDVLKGGPAE-GQ-LQENDRVAMVNGVSMDNVEH 75 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEE---CTTSCCTTTCCCCEEEEEECTTSTTB-TT-BCTTCEEEEETTEECTTCCH
T ss_pred ceeEEEEEEeCCCCccCEEEec---CcCCCcccCCCCCEEEEEECCCCchh-hC-CCCCCEEEEECCEECCCccH
Confidence 467889999996 899999999 544322 45699999999999998 55 99999 89999988654
No 270
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.27 E-value=1e-06 Score=78.43 Aligned_cols=64 Identities=34% Similarity=0.496 Sum_probs=53.9
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+.|.|.++..||||+|.+ +.+...+..|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 29 ~~~~~v~l~~~~~~lG~~l~~---~~~~~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~ 96 (121)
T 2kom_A 29 GKRLNIQLKKGTEGLGFSITS---RDVTIGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQ 96 (121)
T ss_dssp CEEEEEEEECCTTCCCEEEEC---CCCSSSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCH
T ss_pred CeEEEEEEEcCCCcEeEEEEe---ccCCcCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCH
Confidence 456779999999999999999 44433345689999999999999999999999 89999988544
No 271
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.26 E-value=1.3e-06 Score=72.33 Aligned_cols=41 Identities=22% Similarity=0.432 Sum_probs=38.8
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEee
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGR 94 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R 94 (612)
+|++||+|++|||+++.+++|++++++|+.++..|+|+|..
T Consensus 40 Gl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~v~p 80 (82)
T 1r6j_A 40 GLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIMP 80 (82)
T ss_dssp TCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEE
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEe
Confidence 49999999999999999999999999999999999999863
No 272
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.26 E-value=1.1e-06 Score=73.78 Aligned_cols=60 Identities=25% Similarity=0.380 Sum_probs=50.9
Q ss_pred ceeEEEEEEeeCC--CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGA--EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~--~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++++|.|.|.. .+|||+|.+ +.+ ..|++|..|.+||+|++.| |++|| |||..+.++.+
T Consensus 4 ~~~~~~v~l~k~~~~~~~G~~~~~---~~~----~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 69 (91)
T 1m5z_A 4 PVELHKVTLYKDSGMEDFGFSVAD---GLL----EKGVYVKNIRPAGPGDLGG-LKPYDRLLQVNHVRTRDFDC 69 (91)
T ss_dssp CCEEEEEEEECCTTCSSSSEEEEE---CTT----SSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CcceEEEEEEECCCCCCccEEEEe---ccC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3577889999975 489999999 432 3589999999999999999 99999 89999988654
No 273
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.26 E-value=3.8e-06 Score=78.68 Aligned_cols=93 Identities=18% Similarity=0.403 Sum_probs=71.8
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHhcC-CCeEEEEEeecCCCC---------ch--------hhHHhhh------cccC
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLRNT-SGLVRFLIGREKDPV---------NS--------EVAQLIR------QSLQ 56 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk~~-~~~v~l~v~r~~~~~---------~~--------~i~~i~~------G~L~ 56 (612)
+||+|++|||..+.+.++..+..+++.. +..+.|+|+|..... .. .+..+.. .+|+
T Consensus 47 ~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~~g~v~~v~~~s~a~~aGl~ 126 (166)
T 1w9e_A 47 FGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLL 126 (166)
T ss_dssp TTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEECCTTSCCSEEEETTEEEEECTTSHHHHTTCC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEecCCCCcEeEEEeCCEEEEEccCCHHHHcCCC
Confidence 5999999999999999998888888765 458999996551110 00 0111111 2599
Q ss_pred CCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEe
Q psy12938 57 VNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIG 93 (612)
Q Consensus 57 ~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~ 93 (612)
.||+|++|||..+.+..+.++...++..+..+.+.+.
T Consensus 127 ~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 127 TEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp SSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred CCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 9999999999999999999998888888888888775
No 274
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.26 E-value=6.5e-07 Score=79.17 Aligned_cols=59 Identities=27% Similarity=0.522 Sum_probs=51.5
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|+..||||+|.+ +.+ ..|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 14 ~~~~v~l~k~~~glG~~l~~---~~~----~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 76 (119)
T 1tp5_A 14 EPRRIVIHRGSTGLGFNIVG---GED----GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH 76 (119)
T ss_dssp SCEEEEEECTTSCCCEEEEE---CGG----GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCH
T ss_pred ccEEEEEEECCCCccEEEec---CCC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 45679999999999999999 332 3589999999999999999999999 89999988654
No 275
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=1.2e-06 Score=76.36 Aligned_cols=63 Identities=30% Similarity=0.559 Sum_probs=53.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCC---CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGL---EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~---~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+++.|.+...||||+|.| |.++.. ...|++|..|.++++|++.| |++|| |||..+.++++
T Consensus 14 ~~~~~~~l~~~~~glG~~i~~---g~~~~~~~~~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 83 (110)
T 1x5q_A 14 EEELTLTILRQTGGLGISIAG---GKGSTPYKGDDEGIFISRVSEEGPAARAG-VRVGDKLLEVNGVALQGAEH 83 (110)
T ss_dssp CEEEEEEEECSSSSCSEEEEE---CTTSCCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred cceEEEEEecCCCeeeEEEEc---cccCCccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 356779999999999999999 554321 45699999999999999999 99999 89999988655
No 276
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.25 E-value=1.7e-06 Score=82.24 Aligned_cols=76 Identities=11% Similarity=0.018 Sum_probs=64.1
Q ss_pred CCceEEEEEe-CCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc------------------------hhchhhhCC
Q psy12938 497 RHITVIAHLS-SPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV------------------------GDHFSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~------------------------~d~~~~~~~ 549 (612)
++.+||++|| ++||+.|+.+.+.|.+++++|. ++.|+.|..+.. ...+...|.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3458999999 9999999999999999999985 699999877631 114567888
Q ss_pred CC------CCcEEEEE-ECCEEeeEEEecc
Q psy12938 550 TS------GLPAMLAY-RGGEVVGNFVRLG 572 (612)
Q Consensus 550 i~------~lPtllvy-k~G~~~~~~vg~~ 572 (612)
+. .+|+++++ ++|+++..+.|..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~ 139 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINAD 139 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCC
Confidence 88 89999999 8999999998863
No 277
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.24 E-value=9.1e-07 Score=73.98 Aligned_cols=59 Identities=20% Similarity=0.266 Sum_probs=49.1
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++.++|.|.+ ..+|||+|.| |.+ ...|++|..|.+|++|++.| |++|| |||.++.++++
T Consensus 2 ~~~~~v~~~~-~~~~G~~l~g---g~~---~~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (89)
T 2q3g_A 2 MDSFKVVLEG-PAPWGFRLQG---GKD---FNVPLSISRLTPGGKAAQAG-VAVGDWVLSIDGENAGSLTH 64 (89)
T ss_dssp EEEEEEEEES-SSCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCH
T ss_pred ccEEEEEEcC-CCcccEEEEC---cCC---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4567788864 5799999999 443 24589999999999999999 99999 89999998655
No 278
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.23 E-value=2.8e-07 Score=82.88 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=51.7
Q ss_pred eEEEEEEeeCC--CCcceEEEeccCCCCCC------CCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 312 TLLGVELMKGA--EGLGLSIIGMGVGADAG------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 312 ~~~~v~l~k~~--~glG~si~g~~~g~~~~------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+..|.|.|.. .||||+|.+ +.+.. ....|+||..|.+||+|++.|+|++|| |||.++.++++.
T Consensus 29 ~~r~v~l~k~~~~~~lG~~i~~---~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~ 104 (128)
T 1nf3_C 29 THRRVRLCKYGTEKPLGFYIRD---GSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLD 104 (128)
T ss_dssp TCEEEEECCSSTTSCCCEEEEE---EEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHH
T ss_pred ccEEEEEEECCCCCCccEEEEc---cccccccccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 44569999984 789999998 33211 023589999999999999999999999 899999887663
No 279
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.23 E-value=1e-06 Score=76.36 Aligned_cols=61 Identities=23% Similarity=0.321 Sum_probs=50.1
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCC---------CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGL---------EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~---------~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||+|.+ +.+... ..+++||..|.++|+|++.| |++|| |||.++.++++
T Consensus 7 ~r~v~l~k~~~g~G~~l~~---~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 80 (107)
T 3qe1_A 7 PRVVRIVKSESGYGFNVRG---QVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAG-VRKGDRILEVNGVNVEGATH 80 (107)
T ss_dssp CEEEEEECBTTBTCEEEEC---CSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEEECCCCCCEEEEc---ccccCCcceeccccccCCceEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4569999999999999999 332211 13567899999999999999 99999 89999998765
No 280
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.23 E-value=2.1e-06 Score=82.33 Aligned_cols=92 Identities=11% Similarity=0.055 Sum_probs=72.3
Q ss_pred CCceEEEEEe-CCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc------------------------hhchhhhCC
Q psy12938 497 RHITVIAHLS-SPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV------------------------GDHFSATFK 549 (612)
Q Consensus 497 ~~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~------------------------~d~~~~~~~ 549 (612)
++.+|||+|| ++||++|+...+.|.+++++|. +++|+.|..+.. ...+...|.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3458999999 9999999999999999999986 699999887631 113556788
Q ss_pred CC-----CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 550 TS-----GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 550 i~-----~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+. .+|+++++ ++|+++..++|.... .-..++|...|.+.
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~---~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSV---GRNVDEVLRVLDAL 168 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTC---CCCHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCC---CCCHHHHHHHHHHH
Confidence 88 99999999 799999999886322 23567777777643
No 281
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.23 E-value=1.1e-06 Score=77.19 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=47.3
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.++++|.|.|+..||||+|.+ + ..|.||++|+++ +++++|++|| |||.++.+++|.
T Consensus 11 ~~~~~V~L~Kg~~G~GFsI~~---~------~~g~~V~~I~~~---~~~aGL~~GD~Il~VNG~~v~~~~h~ 70 (113)
T 3soe_A 11 GLLVTIPLIKGPKGFGFAIAD---S------PTGQKVKMILDS---QWCQGLQKGDIIKEIYHQNVQNLTHL 70 (113)
T ss_dssp CEEEEEEEECBTTBSSEEEEE---E------TTEEEEEEESCG---GGSTTCCTTCEEEEETTEECTTSCHH
T ss_pred CCEEEEEEEECCCcccEEEeC---C------CCCcEEEEecCh---HHhCCCCCCCEEEEECCEECCCCCHH
Confidence 467889999999999999987 2 337889999983 4567799999 999999999874
No 282
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.21 E-value=4.3e-06 Score=87.75 Aligned_cols=87 Identities=15% Similarity=0.091 Sum_probs=72.0
Q ss_pred eEEEEEeCCCChhhhhhHHHHHHHHhhcC-CceEEEecCC--CchhchhhhCCCCC--CcEEEEEECCEEeeEEEecccc
Q psy12938 500 TVIAHLSSPSLPACRALNSSLAELSRSHT-NVKFVSVPLG--CVGDHFSATFKTSG--LPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 500 ~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~-~vkF~ki~~~--~~~d~~~~~~~i~~--lPtllvyk~G~~~~~~vg~~~~ 574 (612)
.+++.||++||+.|+.+.+.|.++|++|. .+.|+.+|.+ ..+ .+.+.|.+.. +|++++|+.|.....+.-
T Consensus 137 ~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~-~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~---- 211 (361)
T 3uem_A 137 THILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQ-RILEFFGLKKEECPAVRLITLEEEMTKYKP---- 211 (361)
T ss_dssp EEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGH-HHHHHTTCCTTTCSEEEEEECC--CCEECC----
T ss_pred cEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHH-HHHHHcCCCccCCccEEEEEcCCcccccCC----
Confidence 67899999999999999999999999996 5999999998 454 6779999987 999999999766554432
Q ss_pred ccCCCCHHHHHHHHHHC
Q psy12938 575 LGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~ 591 (612)
-+..++.+.|+.|+..+
T Consensus 212 ~~~~~~~~~l~~fi~~~ 228 (361)
T 3uem_A 212 ESEELTAERITEFCHRF 228 (361)
T ss_dssp SSCCCCHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHHHH
Confidence 13468889999999874
No 283
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.21 E-value=1.7e-06 Score=80.42 Aligned_cols=99 Identities=18% Similarity=0.271 Sum_probs=69.5
Q ss_pred CceEEEEEeCCCChhhhhhHHHH---HHHHhhc-CCceEEEecCCCc-hhchhhhCCCCCCcEEEEEEC--CEEeeEEEe
Q psy12938 498 HITVIAHLSSPSLPACRALNSSL---AELSRSH-TNVKFVSVPLGCV-GDHFSATFKTSGLPAMLAYRG--GEVVGNFVR 570 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~-~~vkF~ki~~~~~-~d~~~~~~~i~~lPtllvyk~--G~~~~~~vg 570 (612)
+.+|+|+||++||..|+.|+... .++++.. .+.-+++++.+.. ...+.+.|.+.++|+++++.. |+.+..+.|
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g 121 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ 121 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS
T ss_pred CCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC
Confidence 45999999999999999997653 3343332 2567778887642 224678999999999999953 777776522
Q ss_pred ccccccCCCCHHHHHHHHHHCCcccCCCCC
Q psy12938 571 LGEELGEGYFVEDVEAFLVEAGLLRAGGLP 600 (612)
Q Consensus 571 ~~~~~g~~~~~~~lE~~L~~~g~l~~~~~~ 600 (612)
...+-+.+.|..+|.+++.+.....+
T Consensus 122 ----~~~~~fl~~L~~~l~~~~~~~~~~~~ 147 (153)
T 2dlx_A 122 ----LDVSSFLDQVTGFLGEHGQLDGLSSS 147 (153)
T ss_dssp ----CCHHHHHHHHHHHHHHTCSCSSCCCC
T ss_pred ----CCHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 12234556777888888887755543
No 284
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.1e-06 Score=73.95 Aligned_cols=56 Identities=18% Similarity=0.316 Sum_probs=49.1
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+...+|.|.|+..||||.+.+ . .|++|..|.+||+|++.| |+.|| |||.++.++++
T Consensus 2 ~~~r~v~l~~~~~g~G~~l~~---~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 61 (91)
T 2f5y_A 2 MRYRQITIPRGKDGFGFTICC---D-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKC 61 (91)
T ss_dssp CEEEEEEEECBTTBTSEEEEC---S-------SSCEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CceEEEEEEeCCCCccEEEec---C-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 356679999999999999987 2 369999999999999999 99999 89999988654
No 285
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.21 E-value=1.1e-06 Score=77.89 Aligned_cols=60 Identities=23% Similarity=0.341 Sum_probs=48.2
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
+..+.+.+. .||||+|.| |.+... ..+||.+|.+||+|++.|.|++|| |||.++.+++|.
T Consensus 19 ~~~~~~~~~-~glG~~i~g---g~~~~~--~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~ 82 (118)
T 1v6b_A 19 VRLLRIKKE-GSLDLALEG---GVDSPV--GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLA 82 (118)
T ss_dssp EEEEEEESC-SCCCCEEEE---BTTSSS--CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHH
T ss_pred EEEEEECCC-CccCEEEEc---ccCCCC--CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 344556665 499999999 555432 359999999999999997799999 999999998763
No 286
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.20 E-value=2.4e-07 Score=79.68 Aligned_cols=61 Identities=34% Similarity=0.580 Sum_probs=52.2
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.+++.|.++..||||+|.+ +.+ ...|++|..|.+|++|++.|+|++|| |||.++.++++
T Consensus 10 ~~~~~v~l~~~~~g~G~~~~~---~~~---~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~ 74 (103)
T 1wfv_A 10 FDYFTVDMEKGAKGFGFSIRG---GRE---YKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTH 74 (103)
T ss_dssp SCCEECCEECCTTSSSBCCEE---ETT---TTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCH
T ss_pred ceEEEEEEecCCCcCCEEEec---ccc---CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 345678899998999999998 444 23589999999999999999999999 89999998655
No 287
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.20 E-value=1.1e-06 Score=73.61 Aligned_cols=52 Identities=37% Similarity=0.522 Sum_probs=44.9
Q ss_pred EEEEeeCC--CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 315 GVELMKGA--EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 315 ~v~l~k~~--~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.|.|.+.. .+|||++.+ |+||.+|.+||+|++.|+|++|| |||.++.++++.
T Consensus 3 ~v~l~~~~~~~~~G~~~~~------------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~ 60 (88)
T 3e17_A 3 GVLLMKSRANEEYGLRLGS------------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLT 60 (88)
T ss_dssp EEEEECBTTBCCCCEEEEE------------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH
T ss_pred EEEEEeCCCCCCCCEEEeC------------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 46666644 679999977 69999999999999999999999 899999887763
No 288
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.19 E-value=1.3e-06 Score=81.60 Aligned_cols=74 Identities=15% Similarity=0.165 Sum_probs=55.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC-----------Cchhch-------------------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG-----------CVGDHF------------------- 544 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~-----------~~~d~~------------------- 544 (612)
++.+|||.||++||++|+ ..+.|.+++++|. ++.|+.|+.+ ....++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 345899999999999999 9999999999986 4899988642 111011
Q ss_pred ----------hhhCCCCCCc-------EEEEEECCEEeeEEEec
Q psy12938 545 ----------SATFKTSGLP-------AMLAYRGGEVVGNFVRL 571 (612)
Q Consensus 545 ----------~~~~~i~~lP-------tllvyk~G~~~~~~vg~ 571 (612)
...|.+.++| ++|+.++|+++..+.|.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~ 153 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSL 153 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTT
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCC
Confidence 0246788899 56666999999988774
No 289
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.19 E-value=7.9e-07 Score=73.57 Aligned_cols=56 Identities=23% Similarity=0.333 Sum_probs=46.8
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++|+| +++.+|||+|.| +.+. ..|++|.+|.+||+|++.| |++|| |||.++.++++
T Consensus 3 ~~v~l-~~~~~~G~~l~g---g~~~---~~~v~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 62 (85)
T 1rgw_A 3 YSVTL-TGPGPWGFRLQG---GKDF---NMPLTISRITPGSKAAQSQ-LSQGDLVVAIDGVNTDTMTH 62 (85)
T ss_dssp EEEEE-CCSSCCCEEECC---CGGG---TSCCBEEEECTTSHHHHSS-CCCCSBEEEETTEECTTCCH
T ss_pred EEEEE-eCCCccCEEEEe---ccCC---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 56888 466799999998 4442 3589999999999999988 99999 89999988654
No 290
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.18 E-value=4.6e-07 Score=91.44 Aligned_cols=60 Identities=25% Similarity=0.302 Sum_probs=51.9
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+..+|.|.|.. .||||+|.| |.+ .+.||||.+|.+||+|++++.|++|| |||.++.+++|
T Consensus 77 ~~r~V~L~k~~~~glGf~I~g---g~d---~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~ 141 (263)
T 1z87_A 77 QRRRVTVRKADAGGLGISIKG---GRE---NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATH 141 (263)
T ss_dssp SSEEECCCTTTTCCCCCEEEE---ETT---TTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCH
T ss_pred ccEEEEEEeCCCCCEeEEEee---ccC---CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCH
Confidence 34669999985 899999999 554 24689999999999999987799999 99999999877
No 291
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.18 E-value=1.3e-06 Score=74.18 Aligned_cols=60 Identities=23% Similarity=0.347 Sum_probs=50.4
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||++.+ ..+. ....|++|..|.++++|++.| |++|| |||..+.++++
T Consensus 4 ~r~v~l~k~~~~~G~~l~~---~~~~-~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 67 (96)
T 2v90_A 4 PRCLHLEKGPQGFGFLLRE---EKGL-DGRPGQFLWEVDPGLPAKKAG-MQAGDRLVAVAGESVEGLGH 67 (96)
T ss_dssp CEEEEEECBTTBSCEEEEE---EECT-TSCEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred CEEEEEEeCCCcccEEEEe---ccCC-CCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3569999999999999998 2221 135689999999999999999 99999 89999988654
No 292
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.18 E-value=1.9e-06 Score=82.14 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=62.0
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCC-------chhc---hh-h------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGC-------VGDH---FS-A------------------ 546 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~-------~~d~---~~-~------------------ 546 (612)
+.+|||.||++||+.|+...+.|.+++++|.+ ++|+.|+.+. .++. .. +
T Consensus 48 Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~ 127 (190)
T 2vup_A 48 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGEN 127 (190)
T ss_dssp TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSSTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCccc
Confidence 45899999999999999999999999999863 9999997652 0000 11 1
Q ss_pred -----------hCCCCCCc-------EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 547 -----------TFKTSGLP-------AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 547 -----------~~~i~~lP-------tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
.|.+.++| ++|+.++|+++..+.|... .++|+..|.
T Consensus 128 ~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~-------~~~l~~~i~ 181 (190)
T 2vup_A 128 AHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGAS-------VKDIEKKLI 181 (190)
T ss_dssp BCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCC-------HHHHHHHHH
T ss_pred ccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCC-------HHHHHHHHH
Confidence 13667788 6667799999998877533 355555554
No 293
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.18 E-value=2.3e-06 Score=73.50 Aligned_cols=62 Identities=26% Similarity=0.397 Sum_probs=49.8
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++..|.|.|.. .||||+|.+.+.+ ....++||.+|.+||+|+++|.|++|| |||.++.+.++
T Consensus 9 ~~~~v~l~k~~g~~lG~~i~~~~~~----~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~ 75 (101)
T 2yt7_A 9 NCREVHLEKRRGEGLGVALVESGWG----SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPL 75 (101)
T ss_dssp CCEEEEEECCTTCCCCEEEEECCCS----SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCH
T ss_pred ceEEEEEEeCCCCccCEEEEeCCCC----CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 45668888766 7899999873111 134579999999999999988899999 89999988665
No 294
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.17 E-value=3.6e-06 Score=80.69 Aligned_cols=92 Identities=9% Similarity=0.057 Sum_probs=71.1
Q ss_pred CCceEEEEEe-CCCChhhhhhHHHHHHHHhhcC--CceEEEecCCCc---------------------------hhchhh
Q psy12938 497 RHITVIAHLS-SPSLPACRALNSSLAELSRSHT--NVKFVSVPLGCV---------------------------GDHFSA 546 (612)
Q Consensus 497 ~~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~---------------------------~d~~~~ 546 (612)
++.+||++|| ++||++|+...+.|.+++++|. ++.|+.|..+.. ...+..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3568999999 9999999999999999999884 589998876530 114567
Q ss_pred hCCCC-----CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 547 TFKTS-----GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 547 ~~~i~-----~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
.|.+. .+|+++++ ++|+++..++|.... +...++|...|.+.
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~---~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPL---GRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSC---CCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCC---CCCHHHHHHHHHHH
Confidence 88998 99988888 799999999885322 23456677766543
No 295
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.17 E-value=1.6e-06 Score=76.29 Aligned_cols=60 Identities=30% Similarity=0.355 Sum_probs=49.6
Q ss_pred eEEEEEEeeCCCC-cceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEG-LGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~g-lG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
...+|.|.|+..| |||++.+ +.+ ...+++|..|.+||+|++.|+|++|| |||.++.+.++
T Consensus 24 ~~~~V~l~~~~~~~lG~~l~~---~~~---~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~ 88 (114)
T 2gzv_A 24 VPGKVTLQKDAQNLIGISIGG---GAQ---YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTK 88 (114)
T ss_dssp CCEEEEEECCTTSCCSEEEEE---CCC-----CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCEEEEEEECCCCcEeEEEEe---CCC---CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 4456999999855 9999999 443 23589999999999999999999999 89999976544
No 296
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.15 E-value=1.5e-06 Score=83.65 Aligned_cols=63 Identities=32% Similarity=0.416 Sum_probs=53.4
Q ss_pred cceeEEEEEEeeC-CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 309 EKLTLLGVELMKG-AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 309 ~~~~~~~v~l~k~-~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
....+..|.|.|. ..||||+|.| |.+ ...|+||..|.+||+|++.| |++|| |||.++.++++.
T Consensus 81 ~~~~~~~v~l~k~~~~~lG~~i~~---~~~---~~~~~~V~~V~~gspA~~aG-L~~GD~Il~vng~~v~~~~~~ 148 (192)
T 3k1r_A 81 RSRKLKEVRLDRLHPEGLGLSVRG---GLE---FGCGLFISHLIKGGQADSVG-LQVGDEIVRINGYSISSCTHE 148 (192)
T ss_dssp CCSSCEEEEEETTSTTCCCEEEEE---EGG---GTEEEEEEEECTTSHHHHTT-CCTTEEEEEETTEECTTCCHH
T ss_pred CCCceEEEEEEeCCCCceeEEEEc---ccc---cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHH
Confidence 3446778999998 5899999999 433 34589999999999999999 99999 999999997664
No 297
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.14 E-value=2.7e-06 Score=78.79 Aligned_cols=42 Identities=5% Similarity=0.091 Sum_probs=37.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
++.+|+|+||++||++|+...+.|.+++++|. +++|+.|+.+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d 74 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCN 74 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECC
Confidence 34589999999999999999999999999986 3999999764
No 298
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.14 E-value=5.6e-07 Score=79.19 Aligned_cols=60 Identities=38% Similarity=0.593 Sum_probs=51.5
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+.|.|.|+..||||+|.+ +.+.. ..|+||..|.+||+|++.|+|++|| |||.++.++++
T Consensus 18 ~~~v~l~~~~~glG~~l~~---~~~~~--~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 81 (116)
T 2dm8_A 18 EMIIEISKGRSGLGLSIVG---GKDTP--LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSH 81 (116)
T ss_dssp CEEEEEECCSSCCCCCCBC---CTTSS--CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCH
T ss_pred EEEEEEEECCCcccEEEeC---CCCCC--cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCH
Confidence 4669999999999999998 54432 2489999999999999999999999 89999998654
No 299
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.12 E-value=1.2e-06 Score=73.97 Aligned_cols=56 Identities=23% Similarity=0.396 Sum_probs=48.4
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..|.|.|+..||||++.+ +.+ ..|+||..|.+||+|++.| |++|| |||.++.+++|
T Consensus 7 r~v~l~~~~~~~G~~l~~---~~~----~~~~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 66 (95)
T 3r68_A 7 RVVVIKKGSNGYGFYLRA---GPE----QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDH 66 (95)
T ss_dssp EEEEEECBTTBCSCEEEE---C------CCSEEEECCCTTSHHHHHT-CCTTEEEEEETTEECTTCCH
T ss_pred EEEEEecCCCcccEEEEe---cCC----CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 458999999999999998 332 1489999999999999999 99999 89999998755
No 300
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.12 E-value=2e-06 Score=74.21 Aligned_cols=58 Identities=28% Similarity=0.399 Sum_probs=49.9
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|.. .+|||+|.+ +.+ ...|+||..|.++++|++.| |++|| |||..+.++++
T Consensus 16 ~~~v~l~k~~~~~lG~~~~~---~~~---~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 78 (104)
T 1wi2_A 16 PRIVTLKKPPGAQLGFNIRG---GKA---SQLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEH 78 (104)
T ss_dssp CEEEEECCCTTCCCSEEEEC---CSS---SCCCCEEEEECTTSHHHHHT-CCTTCEEEEETTEECSSCCH
T ss_pred CEEEEEEeCCCCCccEEEEc---ccC---CCCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3569999988 789999999 444 23589999999999999999 99999 89999988655
No 301
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.11 E-value=1.8e-06 Score=71.85 Aligned_cols=55 Identities=29% Similarity=0.392 Sum_probs=45.2
Q ss_pred EEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 315 GVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 315 ~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+|.+ ++..+|||+|.+ +.+. ..|++|..|.++|+|++.| |++|| |||.++.++++
T Consensus 5 ~v~~-~~~~~lG~~l~~---~~~~---~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 63 (87)
T 2pa1_A 5 TVDV-AGPAPWGFRITG---GRDF---HTPIMVTKVAERGKAKDAD-LRPGDIIVAINGESAEGMLH 63 (87)
T ss_dssp EEEE-CSSSCCSEEEEE---EGGG---TEEEEEEEECSSSHHHHTT-CCTTCEEEEETTEESTTCCH
T ss_pred EEEE-CCCCccCEEEec---ccCC---CCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4555 456799999999 4432 3589999999999999999 99999 89999988644
No 302
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.11 E-value=1.1e-06 Score=83.30 Aligned_cols=86 Identities=15% Similarity=0.154 Sum_probs=62.8
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCC-------chhc---hhhh------------------
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGC-------VGDH---FSAT------------------ 547 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~-------~~d~---~~~~------------------ 547 (612)
+.+|||.||++||++|+...+.|.+|+++|.+ +.|+.|+.+. ..+. ..++
T Consensus 49 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~ 128 (181)
T 2p31_A 49 GSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTG 128 (181)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTT
T ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCcc
Confidence 45899999999999999999999999999963 8999997542 1101 1111
Q ss_pred ------CCCCCCc--------EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 548 ------FKTSGLP--------AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 548 ------~~i~~lP--------tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|.+..+| ++|+.++|+++..+.|.. ..++|+..|.+
T Consensus 129 ~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~-------~~~~l~~~i~~ 178 (181)
T 2p31_A 129 AHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTV-------SVEEVRPQITA 178 (181)
T ss_dssp SCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTS-------CHHHHHHHHHT
T ss_pred chhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCC-------CHHHHHHHHHH
Confidence 1133467 778889999999887642 34778777754
No 303
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.11 E-value=3.3e-06 Score=71.28 Aligned_cols=55 Identities=20% Similarity=0.360 Sum_probs=48.7
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
...+|.|.|+..||||.+.+ +.|++|..|.++++|++.| |++|| |||..+.++.+
T Consensus 8 ~~r~v~l~~~~~~~G~~l~~----------~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 66 (93)
T 2dls_A 8 VQRCVIIQKDQHGFGFTVSG----------DRIVLVQSVRPGGAAMKAG-VKEGDRIIKVNGTMVTNSSH 66 (93)
T ss_dssp CEEEEEEECSSSSCCEEEEC----------SSSCEEEEECSSSTTTTTT-CCSSCEEEEETTEECSSSCH
T ss_pred CCEEEEEEeCCCceeEEEeC----------CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 45669999999999999987 2479999999999999999 99999 89999988655
No 304
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.09 E-value=3.4e-06 Score=79.01 Aligned_cols=88 Identities=24% Similarity=0.318 Sum_probs=67.6
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc-cc------
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV-GA------ 379 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~-~~------ 379 (612)
.+.+|.|.|+. .+|||++.+ .+.|+||..|.+|++|++.| |+.|| |||..+.++++ ..
T Consensus 4 ~~r~v~l~k~~~~~lG~~~~~---------~~~g~~V~~v~~~spA~~aG-l~~GD~I~~ing~~v~~~~~~~~~~~~~~ 73 (166)
T 1w9e_A 4 DPREVILCKDQDGKIGLRLKS---------IDNGIFVQLVQANSPASLVG-LRFGDQVLQINGENCAGWSSDKAHKVLKQ 73 (166)
T ss_dssp CCEEEEEECCTTSCCSEEEEE---------ETTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcEeEEEEe---------CCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCHHHHHHHHhc
Confidence 34669999976 589999998 34689999999999999999 99999 88888866433 00
Q ss_pred -----------CC-----------CCcccce-----EEEEeeccccccccCcceeccC
Q psy12938 380 -----------DA-----------GLEKLGI-----FVKTITEAGAAARDGRIQVRRG 410 (612)
Q Consensus 380 -----------~~-----------~~~~~~i-----~i~~i~~~~~a~~dg~l~~~~~ 410 (612)
.. .....|+ +|..+.++++|++.| |+.+|-
T Consensus 74 ~~~~~v~l~vr~~~~~~~v~l~~~~~~~lG~~~~~g~v~~v~~~s~a~~aG-l~~GD~ 130 (166)
T 1w9e_A 74 AFGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNG-LLTEHN 130 (166)
T ss_dssp CCSSEEEEEEECCTTCEEEEEECCTTSCCSEEEETTEEEEECTTSHHHHTT-CCSSEE
T ss_pred CCCCEEEEEEEcCCCcEEEEEecCCCCcEeEEEeCCEEEEEccCCHHHHcC-CCCCCE
Confidence 00 0122344 889999999999988 777774
No 305
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.09 E-value=7.3e-07 Score=74.94 Aligned_cols=57 Identities=21% Similarity=0.342 Sum_probs=48.4
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||++.+ +. +..|++|..|.+||+|++.| |++|| |||.++.++++
T Consensus 4 pr~v~l~k~~~~~G~~l~~---~~----~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (91)
T 2vsp_A 4 PKLCRLAKGENGYGFHLNA---IR----GLPGSFIKEVQKGGPADLAG-LEDEDVIIEVNGVNVLDEPY 64 (91)
T ss_dssp EEEEEEECBTTBTSCCCBC---CT----TCSCCBC-CCCTTSHHHHTT-CCTTCEEEEETTEECTTSCH
T ss_pred cEEEEEEeCCCcccEEEEe---cc----CCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4569999999999999988 32 23489999999999999999 99999 89999987655
No 306
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.09 E-value=3.9e-06 Score=68.22 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=51.9
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchh---hhCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFS---ATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~---~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
|+.|+++||+.|+.+.+.|+++ .++|..++.+..+ .+. .++++..+|++ |.+|+.++ |
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-----~i~~~~vdi~~~~-~~~~~~~~~g~~~vP~~--~~~g~~~~---g-------- 63 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-----GFDFEMINVDRVP-EAAEALRAQGFRQLPVV--IAGDLSWS---G-------- 63 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCH-HHHHHHHHTTCCSSCEE--EETTEEEE---S--------
T ss_pred EEEEcCCCChhHHHHHHHHHHC-----CCCeEEEECCCCH-HHHHHHHHhCCCccCEE--EECCEEEe---c--------
Confidence 5679999999999999999875 4677888877543 222 25899999998 56887532 2
Q ss_pred CCHHHHHHHHHHCC
Q psy12938 579 YFVEDVEAFLVEAG 592 (612)
Q Consensus 579 ~~~~~lE~~L~~~g 592 (612)
+..+.|+.+|.++.
T Consensus 64 ~~~~~l~~~l~~~~ 77 (81)
T 1h75_A 64 FRPDMINRLHPAPH 77 (81)
T ss_dssp CCHHHHGGGSCCC-
T ss_pred CCHHHHHHHHhccc
Confidence 34577887775543
No 307
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.08 E-value=3.1e-06 Score=71.87 Aligned_cols=64 Identities=22% Similarity=0.325 Sum_probs=49.4
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCC-CCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGA-DAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~-~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+. .+|||+|.+.+... .....+.|++|..|.++|+|++.| |++|| |||.++.++++
T Consensus 5 ~r~v~l~k~~~~~~Gf~l~~~g~~~~~~~~~~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 74 (96)
T 2ego_A 5 RKVLTLEKGDNQTFGFEIQTYGLHHREEQRVEMVTFVARVHESSPAQLAG-LTPGDTIASVNGLNVEGIRH 74 (96)
T ss_dssp EEEEEEECCTTCCCSEEEEEEEC-------CCEEEEEEEECTTCHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEEeCCCCCccEEEEeccccccCCCCCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4569999998 69999999732110 011124589999999999999999 99999 89999988654
No 308
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.08 E-value=4.7e-06 Score=76.97 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=37.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
++.+|+|+||++||++|+...+.|.+++++|. ++.|+.|..+
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 73 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCN 73 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 34589999999999999999999999999986 4999999764
No 309
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.08 E-value=4.4e-06 Score=74.31 Aligned_cols=65 Identities=18% Similarity=0.157 Sum_probs=53.0
Q ss_pred ceeEEEEEEeeCC-CCcceEEEeccCCCCCC-CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGA-EGLGLSIIGMGVGADAG-LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~-~glG~si~g~~~g~~~~-~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.++|.|.|+. .||||+|.+ +.... ....+++|..|.++++|++.|+|++|| |||..+.++++
T Consensus 13 ~~~~~~v~l~k~~~~glG~~l~~---~~~~~~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~ 83 (122)
T 1v5q_A 13 HTETTEVVLTADPVTGFGIQLQG---SVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTF 83 (122)
T ss_dssp CEEEEEEEECCCSSSSSCEEEEC---CSCCSSSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCH
T ss_pred cceeEEEEEEeCCCCccCEEEec---ccccCCcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 3467789999985 899999998 42211 134579999999999999999999999 89999988554
No 310
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.08 E-value=8.4e-06 Score=78.51 Aligned_cols=89 Identities=4% Similarity=0.003 Sum_probs=68.9
Q ss_pred CceEEEEEe-CCCChhhhhhHHHHHHHHhhc--CCceEEEecCCCc---------------------------hhchhhh
Q psy12938 498 HITVIAHLS-SPSLPACRALNSSLAELSRSH--TNVKFVSVPLGCV---------------------------GDHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~~~~---------------------------~d~~~~~ 547 (612)
+.+||+.|| ++||+.|....+.|.+++++| .++.|+.|..+.. ...+...
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 458999999 999999999999999999998 5699999987531 1135667
Q ss_pred CCCC------CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 548 FKTS------GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 548 ~~i~------~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
|.+. .+|+++++ ++|+++..++|.... +-..++|.+.|.
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~---~~~~~ell~~l~ 161 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPV---GRDVDEALRLVK 161 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTB---CCCHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCC---CCCHHHHHHHHH
Confidence 8888 89988888 899999998875432 234556655554
No 311
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.08 E-value=4.7e-06 Score=79.30 Aligned_cols=42 Identities=5% Similarity=0.014 Sum_probs=36.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
++.+|||.||++||++|+...+.|.+|+++|. ++.|+.|..+
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 34589999999999999999999999999986 3899988654
No 312
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.07 E-value=3.9e-06 Score=69.90 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=46.1
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++++|.|.|+..||||++.+ ..+ ..|++|..| ++++|+ .| |++|| |||.++.++++
T Consensus 2 ~~~~~v~l~k~~~g~G~~~~~---~~~----~~~~~v~~v-~~spA~-aG-l~~GD~I~~vng~~v~~~~~ 62 (88)
T 3bpu_A 2 MELITVHIVKGPMGFGFTIAD---SPG----GGGQRVKQI-VDSPRS-RG-LKEGDLIVEVNKKNVQALTH 62 (88)
T ss_dssp EEEEEEEEECBTTBSSCEEEE---CTT----SSSEEEEEC-CC--CC-TT-CCTTCEEEEETTEECTTSCH
T ss_pred CcEEEEEEEcCCCceeEEEEe---cCC----CCcEEEEEe-cCChhH-hC-CCCCCEEEEECCEEcCCCCH
Confidence 367889999999999999998 322 348999997 999998 66 99999 89999988654
No 313
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=4.3e-06 Score=73.34 Aligned_cols=63 Identities=22% Similarity=0.265 Sum_probs=49.0
Q ss_pred eEEEEEEeeC-CCCcceEEEeccCCCCCCC-C---ccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKG-AEGLGLSIIGMGVGADAGL-E---KLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~-~~glG~si~g~~~g~~~~~-~---~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+..+|.|.|. ..||||+|.+ +.+... + ..+++|..|.+|++|+++..|++|| |||.++.++++
T Consensus 10 ~~~~v~l~~~~~~~lGf~l~~---~~~~~~~g~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~ 81 (114)
T 1uew_A 10 QTSDVVIHRKENEGFGFVIIS---SLNRPESGSTITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPH 81 (114)
T ss_dssp CCEEEEEECCTTSCCCEEEEC---CCCSCCSSCCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCH
T ss_pred cceEEEEEECCCCCCCEEEEe---ecccCCCCcccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCH
Confidence 4566889885 4899999999 443322 1 2378999999999999944499999 89999988654
No 314
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.06 E-value=7.1e-06 Score=68.57 Aligned_cols=50 Identities=14% Similarity=0.291 Sum_probs=43.6
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.+-..|+|++||+|++|||+++.++++++++.+|+.+++.|+|++.+...
T Consensus 33 pA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~v~L~v~~~~~ 82 (88)
T 3e17_A 33 LATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSRGKLQLVVLRDLE 82 (88)
T ss_dssp HHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEECCC--
T ss_pred HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEeCCCc
Confidence 34455679999999999999999999999999999999999999987544
No 315
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=3.1e-06 Score=72.64 Aligned_cols=63 Identities=29% Similarity=0.489 Sum_probs=48.4
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCC------CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGL------EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~------~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|.|.. .+|||++.+ +.+... ...|+||.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 4 dp~~v~l~~~~~~~lG~~~~~---~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~ 77 (103)
T 2fcf_A 4 QPRRVELWREPSKSLGISIVG---GRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH 77 (103)
T ss_dssp SCEEEEECCCC-CCCCEEEEC---CCC-------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCEEEEEEeCCCCceeEEEEc---cCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 34668998887 679999998 333211 23589999999999999999999999 89999988655
No 316
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.05 E-value=6.3e-06 Score=71.61 Aligned_cols=61 Identities=23% Similarity=0.342 Sum_probs=48.7
Q ss_pred EEEEEEee-CCCCcceEEEeccCCCCCC---------CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMK-GAEGLGLSIIGMGVGADAG---------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k-~~~glG~si~g~~~g~~~~---------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.| ...||||+|.+ +.+.. ....|++|..|.+|++|++.| |++|| |||.++.+++|
T Consensus 8 ~~~v~l~~~~~~g~G~~l~~---~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 82 (109)
T 1q3o_A 8 EKTVLLQKKDSEGFGFVLRG---AKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAG-LRMGDFLIEVNGQNVVKVGH 82 (109)
T ss_dssp EEEEEEECCTTSCCSEEEEE---SSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEEEECCCCCCcEEEEe---ccCCCCcccccccccCCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 45688875 45899999999 43321 123489999999999999999 99999 89999988755
No 317
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.05 E-value=5.8e-06 Score=72.60 Aligned_cols=46 Identities=28% Similarity=0.246 Sum_probs=41.8
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R~~~ 97 (612)
.++|++||+|++|||.++.+++|++++.+|+.+ +..|+|+|.|...
T Consensus 47 ~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 47 CQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp STTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred hCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 468999999999999999999999999999986 5699999999654
No 318
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.05 E-value=1.1e-05 Score=77.20 Aligned_cols=90 Identities=8% Similarity=0.008 Sum_probs=69.8
Q ss_pred CceEEEEEe-CCCChhhhhhHHHHHHHHhhc--CCceEEEecCCCc---------------------------hhchhhh
Q psy12938 498 HITVIAHLS-SPSLPACRALNSSLAELSRSH--TNVKFVSVPLGCV---------------------------GDHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~~~~---------------------------~d~~~~~ 547 (612)
+.+||+.|| ++||+.|....+.|.+++++| .+++|+.|..+.. ...+...
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 113 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSED 113 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHH
Confidence 458999999 999999999999999999998 4699999887631 0135677
Q ss_pred CCCC------CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 548 FKTS------GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 548 ~~i~------~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|.+. .+|+++++ ++|+++..++|.... +-..+++.+.|.+
T Consensus 114 ~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~---~~~~~e~l~~l~~ 160 (197)
T 1qmv_A 114 YGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPV---GRSVDEALRLVQA 160 (197)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTB---CCCHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCcEEEEEeCCCCC---CCCHHHHHHHHHh
Confidence 8887 78977777 899999998886332 3355677766654
No 319
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.05 E-value=1.2e-05 Score=78.77 Aligned_cols=90 Identities=12% Similarity=0.094 Sum_probs=71.4
Q ss_pred CceEEEEEe-CCCChhhhhhHHHHHHHHhhc--CCceEEEecCCCc---------------------------hhchhhh
Q psy12938 498 HITVIAHLS-SPSLPACRALNSSLAELSRSH--TNVKFVSVPLGCV---------------------------GDHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~~~~---------------------------~d~~~~~ 547 (612)
..+||+.|| ++||+.|+...+.|.+++++| .+++|+.|..+.. ...+...
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 358999999 999999999999999999998 5799999876521 1135678
Q ss_pred CCCC------CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 548 FKTS------GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 548 ~~i~------~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
|.+. .+|+++++ ++|+++..++|... .+...++|.+.|.+
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~---~~~~~~ell~~l~~ 182 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLP---VGRSVEETLRLVKA 182 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTT---CCCCHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCC---CCCCHHHHHHHHHH
Confidence 8888 99999999 89999998887522 23456777776654
No 320
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.05 E-value=4.2e-06 Score=71.03 Aligned_cols=60 Identities=13% Similarity=0.287 Sum_probs=47.3
Q ss_pred eEEEEEEeeCCC---CcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAE---GLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~---glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
....|.|.|... +|||+|.+. ... +..|+||..|.+||+|++.| |+.|| |||.++.++++
T Consensus 6 ~~~~v~i~k~~~~~~~~Gf~v~~~---~~~--~~~g~~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~ 72 (94)
T 3kzd_A 6 VTHSIHIEKSDTAADTYGFSLSSV---EED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNS 72 (94)
T ss_dssp EEEEEEEEC------CCSEEEEEE---CSS--SSCEEEEEEECTTSHHHHTT-CCTTCEEEEETTEEGGGCCH
T ss_pred ceeEEEEEeCCCCcCCcCEEEEec---CCC--CcCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 345688888874 899999983 221 34589999999999999999 99999 89999998655
No 321
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=1.4e-06 Score=73.39 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=46.0
Q ss_pred EEEEEeeC-CCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKG-AEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~-~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..|.|.|. ..+|||+|.+ ...|++|.+|.+||+|++.|.|++|| |||.++ +.++
T Consensus 8 r~v~l~k~~~~~lG~~i~~---------~~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~ 66 (91)
T 2e7k_A 8 RMVGIRKTAGEHLGVTFRV---------EGGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDP 66 (91)
T ss_dssp CBCCBCCCTTCCCCEEEEE---------SSSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCH
T ss_pred EEEEEEECCCCcEeEEEEe---------cCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCH
Confidence 34778765 4789999998 24589999999999999999999999 899999 7655
No 322
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.05 E-value=1.7e-06 Score=74.49 Aligned_cols=58 Identities=22% Similarity=0.393 Sum_probs=48.9
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.++|.|. +..+|||+|.| |.+. +.+++|.+|.++++|++.| |++|| |||..+.++++
T Consensus 5 ~~~~v~l~-~~~~~G~~l~g---g~~~---~~~v~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 66 (103)
T 1wf7_A 5 SSGSVSLV-GPAPWGFRLQG---GKDF---NMPLTISSLKDGGKASQAH-VRIGDVVLSIDGISAQGMTH 66 (103)
T ss_dssp CCEEEEEE-SSSCCSCCEEE---ETTT---TEEEEECCCCTTCHHHHTT-CCTTCBEEEETTEECSSCCH
T ss_pred CEEEEEEe-CCCccCEEEec---cccC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 45678887 56899999999 5542 4579999999999999999 99999 89999988644
No 323
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.04 E-value=3.6e-06 Score=79.61 Aligned_cols=41 Identities=10% Similarity=0.152 Sum_probs=36.6
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
+.+|||.||++||+.|+...+.|.+++++|. .+.|+.|..+
T Consensus 47 gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 89 (183)
T 2obi_A 47 GFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCN 89 (183)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECC
Confidence 4589999999999999999999999999986 4999998754
No 324
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.03 E-value=3.2e-06 Score=72.50 Aligned_cols=57 Identities=23% Similarity=0.364 Sum_probs=49.3
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||++.+ +.+ ..|++|..|.+|++|++.| |++|| |||..+.++++
T Consensus 7 ~r~v~l~k~~~g~G~~l~~---~~~----~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 67 (102)
T 2d90_A 7 GRVVVIKKGSNGYGFYLRA---GPE----QKGQIIKDIEPGSPAEAAG-LKNNDLVVAVNGKSVEALDH 67 (102)
T ss_dssp SEEEEEECCSSSSSCEEEE---CSS----SSSEEEECCCTTSTTTTTT-CCTTCEEEEESSCBCTTSCH
T ss_pred CEEEEEeeCCCCccEEEEe---ecC----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4569999999999999998 332 3489999999999999999 99999 89999988653
No 325
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.02 E-value=9e-06 Score=77.50 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=69.0
Q ss_pred CceEEEEEe-CCCChhhhhhHHHHHHHHhhc--CCceEEEecCCCc---------------------------hhchhhh
Q psy12938 498 HITVIAHLS-SPSLPACRALNSSLAELSRSH--TNVKFVSVPLGCV---------------------------GDHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~~~~---------------------------~d~~~~~ 547 (612)
+.+||++|| ++||+.|....+.|.+++++| .++.|+.|..+.. ...+...
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 110 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARS 110 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHH
Confidence 458999999 999999999999999999998 5799999876521 0135678
Q ss_pred CCCC-----CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 548 FKTS-----GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 548 ~~i~-----~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
|.+. .+|+++++ ++|+++..++|.... +...+++.+.|.
T Consensus 111 ~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~---~~~~~~l~~~l~ 155 (192)
T 2h01_A 111 YDVLFNESVALRAFVLIDKQGVVQHLLVNNLAL---GRSVDEILRLID 155 (192)
T ss_dssp TTCEETTTEECCEEEEECTTSBEEEEEEGGGSS---GGGHHHHHHHHH
T ss_pred hCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCC---CCCHHHHHHHHH
Confidence 8888 89999999 899999988774221 224455655554
No 326
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.02 E-value=4.8e-06 Score=70.82 Aligned_cols=56 Identities=20% Similarity=0.390 Sum_probs=48.2
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..|.|.|+..||||++.+ +. +..|++|..|.++|+|++.| |++|| |||.++.++++
T Consensus 11 ~~~~l~~~~~g~G~~~~~---~~----~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 70 (98)
T 2jxo_A 11 RLCTMKKGPSGYGFNLHS---DK----SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQH 70 (98)
T ss_dssp EEEEEECTTTCCCEEEEC---CC----SSSCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred EEEEEEeCCCcccEEEEe---cC----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 448899999999999998 33 23489999999999999999 99999 89999988554
No 327
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.01 E-value=1.2e-06 Score=72.26 Aligned_cols=54 Identities=15% Similarity=0.289 Sum_probs=48.0
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||++.+ + .|++|..|.+|++|++.| |++|| |||.++.++++
T Consensus 3 ~r~v~l~~~~~g~G~~~~~---~-------~~~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 60 (83)
T 2kv8_A 3 VRSVEVARGRAGYGFTLSG---Q-------APCVLSCVMRGSPADFVG-LRAGDQILAVNEINVKKASH 60 (83)
T ss_dssp EEEEEECCCSSCCSCBCCC---S-------SSCBCCBCCTTSTTTTTT-CCTTCEEEEETTEECSSCCH
T ss_pred cEEEEEEeCCCcccEEEEc---C-------CCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4679999999999999977 2 279999999999999999 99999 89999998754
No 328
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.01 E-value=4.7e-06 Score=71.64 Aligned_cols=59 Identities=32% Similarity=0.385 Sum_probs=46.5
Q ss_pred EEEEeeCC----CCcceEEEeccCCCCCC---------CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 315 GVELMKGA----EGLGLSIIGMGVGADAG---------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 315 ~v~l~k~~----~glG~si~g~~~g~~~~---------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.|++.|.. .+|||+|.| +.+.. ....|+||..|.++|+|++.| |++|| |||.++.+++|
T Consensus 7 ~i~~~~~~~~~~~~lG~~i~g---~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 82 (104)
T 3sfj_A 7 RVEIHKLRQGENLILGFSIGG---GIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTMVTH 82 (104)
T ss_dssp EEEEECEEETTEEECSEEEEE---CTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred EEEEEEccCCCCCcccEEEEC---ccccCccccccccCCCCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 35665544 269999998 44421 235699999999999999999 99999 89999988664
No 329
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.00 E-value=1.3e-06 Score=76.36 Aligned_cols=59 Identities=32% Similarity=0.522 Sum_probs=51.3
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.+.|.|.|...||||+|.+ +.+ ..|++|..|.++++|++.|+|++|| |||..+.++++
T Consensus 15 ~~~~v~l~k~~~glG~~l~~---~~~----~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~ 77 (113)
T 1um7_A 15 EPRKIILHKGSTGLGFNIVG---GED----GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATH 77 (113)
T ss_dssp SEEEEEEECCSSCSSBCCBC---CST----TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCH
T ss_pred ceEEEEEEECCCcccEEEEe---ccC----CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 45679999999999999998 332 3589999999999999999999999 89999988654
No 330
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.25 E-value=8.1e-07 Score=78.06 Aligned_cols=59 Identities=29% Similarity=0.436 Sum_probs=49.0
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.+|.|.|.. .||||++.+ |.+. ..|++|.+|.+||+|++++.|++|| |||.++.++++
T Consensus 28 ~~~v~l~k~~~~glG~~l~~---g~~~---~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~ 91 (112)
T 2lob_A 28 IRKVLLLKEDHEGLGISITG---GKEH---GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKH 91 (112)
Confidence 4458888866 899999999 5442 3589999999999999965599999 89999988765
No 331
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=97.99 E-value=5.5e-06 Score=73.91 Aligned_cols=61 Identities=30% Similarity=0.514 Sum_probs=49.0
Q ss_pred EEEEEeeCC-CCcceEEEeccCCCCCC------CCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGA-EGLGLSIIGMGVGADAG------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~-~glG~si~g~~~g~~~~------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+|.+.|.. .+|||++.+ +.+.. ....|++|..|.+||+|++.|+|++|| |||.++.++++
T Consensus 26 ~~v~l~k~~~~~lGi~v~~---~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~ 97 (123)
T 2iwq_A 26 RRVELWREPSKSLGISIVG---GRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASH 97 (123)
T ss_dssp EEEEECCCTTSCCSEEEEE---CC---------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred EEEEEEecCCCCccEEEEe---ccCccccccccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 458888875 689999998 33221 123589999999999999999999999 89999988654
No 332
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.99 E-value=2.1e-06 Score=74.14 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=49.1
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|+..||||+|.+ +. +..|+||..|.++++|++.| |++|| |||.++.++++
T Consensus 9 ~r~v~l~k~~~~~G~~l~~---~~----~~~g~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 69 (106)
T 2eei_A 9 PRLCYLVKEGGSYGFSLKT---VQ----GKKGVYMTDITPQGVAMRAG-VLADDHLIEVNGENVEDASH 69 (106)
T ss_dssp SEEEEEECCSSSCSCCEEC---CS----SCCSCEECCCCTTSHHHHHT-CCSSEEEEEETTEECTTCCH
T ss_pred CEEEEEEECCCCCCEEEEe---cc----CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3559999999999999988 32 24589999999999999999 99999 89999987655
No 333
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.99 E-value=2.4e-05 Score=62.22 Aligned_cols=68 Identities=15% Similarity=0.261 Sum_probs=50.5
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCchhchhh---hCCCCCCcEEEEEECCEEeeEEEeccccccCC
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVGDHFSA---TFKTSGLPAMLAYRGGEVVGNFVRLGEELGEG 578 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~d~~~~---~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~ 578 (612)
++.|+++||+.|+.+.+.|+++ ++.|..++.+..+ .+.+ .+++..+|++++ +|+. +.|
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~i~~~~~di~~~~-~~~~~~~~~~~~~vP~l~~--~g~~---~~g-------- 63 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----GLAYNTVDISLDD-EARDYVMALGYVQAPVVEV--DGEH---WSG-------- 63 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTCH-HHHHHHHHTTCBCCCEEEE--TTEE---EES--------
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCCcEEEECCCCH-HHHHHHHHcCCCccCEEEE--CCeE---EcC--------
Confidence 5668999999999999999876 4677777777543 2333 789999999984 8874 233
Q ss_pred CCHHHHHHHH
Q psy12938 579 YFVEDVEAFL 588 (612)
Q Consensus 579 ~~~~~lE~~L 588 (612)
+..+.|+.+|
T Consensus 64 ~~~~~l~~~l 73 (75)
T 1r7h_A 64 FRPERIKQLQ 73 (75)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 3457788776
No 334
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.98 E-value=8.4e-06 Score=76.90 Aligned_cols=91 Identities=13% Similarity=0.133 Sum_probs=63.5
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC--ceEEEecCCC-------chh---chhhh-C----CC---------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN--VKFVSVPLGC-------VGD---HFSAT-F----KT--------- 550 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~--vkF~ki~~~~-------~~d---~~~~~-~----~i--------- 550 (612)
++.+|+|+||++||++|+...+.|.+|+++|.+ +.|+.|..+. ..+ ...++ + .+
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 345999999999999999999999999999964 8999886432 100 11122 1 11
Q ss_pred -------------CCCc-----EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 551 -------------SGLP-----AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 551 -------------~~lP-----tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
..+| ++|+.++|+++..+.|.... +-..+.|+.+|.+
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~---~~l~~~i~~lL~~ 171 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPI---EVIRPDIAALVRQ 171 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCG---GGTHHHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCH---HHHHHHHHHHHHH
Confidence 1245 68999999999998775333 2334667776654
No 335
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.96 E-value=2.6e-05 Score=72.25 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=65.2
Q ss_pred ceEEEEEeCCC-ChhhhhhHHHHHHHHhhcCCceEEEecCCCc----------------------hhchhhhCCCCC---
Q psy12938 499 ITVIAHLSSPS-LPACRALNSSLAELSRSHTNVKFVSVPLGCV----------------------GDHFSATFKTSG--- 552 (612)
Q Consensus 499 ~~Vvvhfy~~~-~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~----------------------~d~~~~~~~i~~--- 552 (612)
.++|++||+.| |++|+...+.|.+++++|.++.|+.|..+.. ...+...|.+..
T Consensus 45 k~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~ 124 (167)
T 2jsy_A 45 KVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKEL 124 (167)
T ss_dssp SCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTT
T ss_pred CeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccC
Confidence 47999999999 9999999999999999998899999876631 013445677765
Q ss_pred ---CcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 553 ---LPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 553 ---lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
.|+++++ ++|+++..++|.... .....+++.+.|.
T Consensus 125 g~~~p~~~lid~~G~i~~~~~g~~~~--~~~~~~~l~~~l~ 163 (167)
T 2jsy_A 125 RLLARSVFVLDENGKVVYAEYVSEAT--NHPNYEKPIEAAK 163 (167)
T ss_dssp CSBCCEEEEECTTSCEEEEEECSBTT--SCCCSHHHHHHHH
T ss_pred CceeeEEEEEcCCCcEEEEEecCCcC--CCCCHHHHHHHHH
Confidence 3876666 799999999875221 2223455555554
No 336
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.96 E-value=2.8e-06 Score=71.80 Aligned_cols=58 Identities=21% Similarity=0.236 Sum_probs=48.0
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..++|.| ++..+|||++.| |.+. ..+++|..|.++++|++.| |++|| |||..+.++++
T Consensus 8 ~~~~v~l-~~~~~~G~~l~g---g~~~---~~~v~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 69 (94)
T 2eeg_A 8 MPHSVTL-RGPSPWGFRLVG---GRDF---SAPLTISRVHAGSKAALAA-LCPGDLIQAINGESTELMTH 69 (94)
T ss_dssp CCEEEEE-CCSSCCSCCEEC---CTTT---TSCCEECCCCSSSHHHHTT-CCTTCEEEEETTEETTTCCH
T ss_pred ceEEEEE-eCCCccCEEEEC---ccCC---CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4456888 455799999999 5553 4589999999999999999 99999 89999987643
No 337
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=1.4e-05 Score=69.17 Aligned_cols=50 Identities=24% Similarity=0.370 Sum_probs=44.4
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDP 98 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~~ 98 (612)
+...|+|++||+|++|||+++.++++.+++.+++.++..|.|+|.|..+.
T Consensus 54 A~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 54 AAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCSS
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCCC
Confidence 33445799999999999999999999999999999999999999987653
No 338
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.96 E-value=1.6e-05 Score=74.48 Aligned_cols=40 Identities=18% Similarity=0.249 Sum_probs=35.2
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEec
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVP 536 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~ 536 (612)
....+|+.|++.||+.|+.+.+.|..+.++|++++|.-.+
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~v~~~~~~ 60 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYRE 60 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCCEEEEEEe
Confidence 4557899999999999999999999999999988877654
No 339
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=97.96 E-value=9.7e-06 Score=71.79 Aligned_cols=50 Identities=22% Similarity=0.282 Sum_probs=44.4
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++-..|+|++||+|++|||.++.++++++++.+|+.+++.|+|+|.|...
T Consensus 65 pA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~v~R~~~ 114 (118)
T 3b76_A 65 VISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVKE 114 (118)
T ss_dssp HHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSCCSEEEEEEEEEEE
T ss_pred HHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 33445679999999999999999999999999999999999999998643
No 340
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=5.2e-06 Score=71.07 Aligned_cols=59 Identities=27% Similarity=0.454 Sum_probs=48.8
Q ss_pred eEEEEEEee--CCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMK--GAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k--~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++.+|.|.+ ...||||+|.+ +.+ ...|++|..|.++++|++.| |++|| |||..+.++.+
T Consensus 8 ~~~~v~l~~~~~~~~lG~~~~~---~~~---~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 72 (101)
T 1uez_A 8 EVRLVSLRRAKAHEGLGFSIRG---GSE---HGVGIYVSLVEPGSLAEKEG-LRVGDQILRVNDKSLARVTH 72 (101)
T ss_dssp CCEEECCCCCCTTTCSSEEEEE---CTT---TTCCEEEEEECTTSHHHHHT-CCSSCCEEEETTEECSSCCH
T ss_pred ccEEEEEEECCCCCcccEEEeC---CCC---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 455577776 45799999999 443 23589999999999999999 99999 89999988765
No 341
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=8.5e-06 Score=73.25 Aligned_cols=87 Identities=14% Similarity=0.210 Sum_probs=59.3
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCc---h---hchhhhCCCCCCcEEEEEECCEEeeEEEecccc
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCV---G---DHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~---~---d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~ 574 (612)
|++ |+++||+.|+.+.+.|+.+. +.|..++++.. + +.+...+.+..+|+| |.+|+.++.+-.+.+.
T Consensus 29 vvv-f~~~~Cp~C~~~~~~L~~~~-----i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l--~i~G~~igg~~~l~~~ 100 (130)
T 2cq9_A 29 VVI-FSKTSCSYCTMAKKLFHDMN-----VNYKVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGTFIGGATDTHRL 100 (130)
T ss_dssp EEE-EECSSCSHHHHHHHHHHHHT-----CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEE--EETTEEEEEHHHHHHH
T ss_pred EEE-EEcCCChHHHHHHHHHHHcC-----CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEE--EECCEEEcChHHHHHH
Confidence 555 99999999999999999984 34445555432 2 136678899999998 4599877653222111
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCC
Q psy12938 575 LGEGYFVEDVEAFLVEAGLLRAGGL 599 (612)
Q Consensus 575 ~g~~~~~~~lE~~L~~~g~l~~~~~ 599 (612)
+....|+.+|.+.|+.....-
T Consensus 101 ----~~~~~L~~~L~~~g~~~~~~~ 121 (130)
T 2cq9_A 101 ----HKEGKLLPLVHQCYLKKSKRK 121 (130)
T ss_dssp ----HHHTSSHHHHHHHSSSCSSCS
T ss_pred ----HHcCcHHHHHHHcCcHHHhHH
Confidence 111458889999998765553
No 342
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.95 E-value=4.5e-06 Score=71.16 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=47.4
Q ss_pred EEEeeCCCCcceEEEeccCC-CCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VELMKGAEGLGLSIIGMGVG-ADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l~k~~~glG~si~g~~~g-~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
|.|.|+..||||+|.+.... .++.....|++|..|.+||+|++.| |++|| |||.++.++++
T Consensus 6 v~l~~~~~~~Gf~l~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 71 (99)
T 3khf_A 6 IVIHSSGKKYGFSLRAIRVYMGDSDVYTVHHVVWSVEDGSPAQEAG-LRAGDLITHINGESVLGLVH 71 (99)
T ss_dssp EEEEC-CCCCCEEEEEEEEESSSSSCEEEEEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred EEEEeCCCCCcEEEEecccccCccccccCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 88899999999999983111 0111123488999999999999999 99999 89999998765
No 343
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=97.95 E-value=7.3e-06 Score=68.67 Aligned_cols=57 Identities=18% Similarity=0.196 Sum_probs=46.7
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++|.+.. ..+|||++.+ +.+ ...|++|..|.++|+|++.| |++|| |||.++.++.+
T Consensus 4 ~~~v~~~~-~~~~G~~l~~---~~~---~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 64 (91)
T 2pkt_A 4 TQQIDLQG-PGPWGFRLVG---GKD---FEQPLAISRVTPGSKAALAN-LCIGDVITAIDGENTSNMTH 64 (91)
T ss_dssp EEEEEEES-SSCCSEEEEE---EGG---GTEEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred cEEEEECC-CCCCCEEEEc---cCC---CCCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 35576764 4689999999 443 23589999999999999999 99999 89999988663
No 344
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.93 E-value=6.8e-06 Score=78.79 Aligned_cols=53 Identities=30% Similarity=0.431 Sum_probs=42.9
Q ss_pred CCcceEEEeccCCCCCCC--CccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 323 EGLGLSIIGMGVGADAGL--EKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 323 ~glG~si~g~~~g~~~~~--~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.||||+|.|+-.+.+.+. .+.|+||.+|.+||+|++ | |++|| |||.++.+++|
T Consensus 2 ~g~Gf~i~gg~~~~~~~~~~~~~g~~V~~v~~~spA~~-g-l~~GD~I~~vng~~v~~~~~ 60 (195)
T 2qbw_A 2 PELGFSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASK-L-LQPGDKIIQANGYSFINIEH 60 (195)
T ss_dssp CCSSEEEEECTTSCCCSSCTTCCSEEEEEECTTSTTTT-T-CCTTCEEEEETTEECTTCCH
T ss_pred CcccEEEECCcCCCCCccccCCCCEEEEEECCCChHHh-C-CCCCCEEEEECCEECCCCCH
Confidence 589999999322222222 567999999999999999 7 99999 89999998775
No 345
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=97.92 E-value=8.6e-06 Score=68.58 Aligned_cols=48 Identities=21% Similarity=0.253 Sum_probs=42.4
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+-..|+|++||+|++|||.++.++++++++.+|+.+++.|+|+|.|..
T Consensus 41 A~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~ 88 (93)
T 3o46_A 41 ADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQGAITFKIIPGS 88 (93)
T ss_dssp HHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCEEEEEEEECC-
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCC
Confidence 334557999999999999999999999999999999999999998753
No 346
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=97.92 E-value=7.3e-06 Score=74.72 Aligned_cols=62 Identities=31% Similarity=0.365 Sum_probs=49.7
Q ss_pred eEEEEEEeeCC----CCcceEEEeccCCCCCC---------CCccceEEEEeccCchhcccCCccccc----CCceeeee
Q psy12938 312 TLLGVELMKGA----EGLGLSIIGMGVGADAG---------LEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIG 374 (612)
Q Consensus 312 ~~~~v~l~k~~----~glG~si~g~~~g~~~~---------~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g 374 (612)
.+.+|.|.|.. .+|||+|.| |.+.. ....|++|..|.+||+|++.| |++|| |||.++.+
T Consensus 23 ~~~~v~l~~~~~~~~~~lG~~i~~---g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~ 98 (139)
T 2vz5_A 23 MVQRVEIHKLRQGENLILGFSIGG---GIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAG-LQIGDKIMQVNGWDMTM 98 (139)
T ss_dssp EEEEEEEECEEETTEEECSEEEEE---CTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTT
T ss_pred ceEEEEEEEcCCCCcccccEEEEc---cccCChhhhhhcccCCCCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEEcCC
Confidence 45678888755 379999998 44321 124699999999999999999 99999 89999987
Q ss_pred ccc
Q psy12938 375 MGV 377 (612)
Q Consensus 375 ~~~ 377 (612)
+++
T Consensus 99 ~~~ 101 (139)
T 2vz5_A 99 VTH 101 (139)
T ss_dssp CCH
T ss_pred CCH
Confidence 654
No 347
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=97.91 E-value=1.7e-05 Score=68.89 Aligned_cols=50 Identities=16% Similarity=0.327 Sum_probs=43.4
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC---CCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT---SGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~---~~~v~l~v~R~~~ 97 (612)
++-..|+|++||+|++|||+++.+++|++++.+|+.+ .+.|+|+|.|...
T Consensus 45 pA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 45 AVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp HHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred hHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 3444567999999999999999999999999999887 5689999998654
No 348
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.90 E-value=1.6e-05 Score=75.08 Aligned_cols=47 Identities=66% Similarity=0.928 Sum_probs=42.8
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+-..|+|++||+|++|||+++.+++|.+++.+|+.++..|+|+|.|.
T Consensus 124 A~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 124 AHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRE 170 (170)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHHCCSEEEEEEEEC
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 33456799999999999999999999999999999999999999984
No 349
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.90 E-value=3.4e-05 Score=75.26 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=67.3
Q ss_pred CceEEEEEe-CCCChhhhhhHHHHHHHHhhc--CCceEEEecCCCc---------------------------hhchhhh
Q psy12938 498 HITVIAHLS-SPSLPACRALNSSLAELSRSH--TNVKFVSVPLGCV---------------------------GDHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~--~~vkF~ki~~~~~---------------------------~d~~~~~ 547 (612)
+.+|||.|| ++||+.|....+.|.+++++| .+++|+.|..+.. ...++..
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 458999999 999999999999999999998 5799998876531 0135677
Q ss_pred CCCC-----CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 548 FKTS-----GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 548 ~~i~-----~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
|.+. .+|+++++ ++|+++..+++.... +-..++|.+.|.
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~---~~~~~ell~~l~ 176 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAI---GRSVDEILRIID 176 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBEEEEEEECTTC---CCCHHHHHHHHH
T ss_pred hCCccccCCcccEEEEECCCCEEEEEEecCCCC---CCCHHHHHHHHH
Confidence 8888 78977776 799999998775322 224566665554
No 350
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=97.90 E-value=1.3e-05 Score=66.86 Aligned_cols=46 Identities=30% Similarity=0.401 Sum_probs=41.7
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
..|+|++||+|++|||.++.++++++++.+|+.+.+.|+|+|.|..
T Consensus 40 ~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 85 (88)
T 1kwa_A 40 RQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITFKIVPSY 85 (88)
T ss_dssp HHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEECCc
Confidence 3367999999999999999999999999999998889999998754
No 351
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=2.5e-06 Score=76.40 Aligned_cols=63 Identities=27% Similarity=0.374 Sum_probs=49.0
Q ss_pred EEEEeeCCCCcceEEEec----------------------cCCCCCCCCccceEEEEeccCchhcccCCccccc----CC
Q psy12938 315 GVELMKGAEGLGLSIIGM----------------------GVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GL 368 (612)
Q Consensus 315 ~v~l~k~~~glG~si~g~----------------------~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vn 368 (612)
+|.|.|+..||||+|.+. |........+.|++|..|.++++|++.| |++|| ||
T Consensus 11 ~v~l~r~~~g~Gf~l~~~t~y~~~~~~~~~~~~~~~G~~~G~~~~~~~~~~gv~V~~V~~~spA~~aG-L~~GD~I~~in 89 (126)
T 2yuy_A 11 TVTLKRTSQGFGFTLRHFIVYPPESAIQFSYKDEENGNRGGKQRNRLEPMDTIFVKQVKEGGPAFEAG-LCTGDRIIKVN 89 (126)
T ss_dssp CEEEECCSSSCSCCBCCCCCCCCSSCCCSCSSSCCCCSCCCTTSCCCCCCCCCCBCCCCSSSHHHHHT-CCSSCCCCEET
T ss_pred EEEEEECCCCcceeecCccccCCHHHHHHHHHhhcCcceeceeeecccCCCCEEEEEECCCChHHHcC-CCCCCEEEEEC
Confidence 499999999999999861 0000000123579999999999999999 99999 89
Q ss_pred ceeeeecccc
Q psy12938 369 GLSIIGMGVG 378 (612)
Q Consensus 369 g~~~~g~~~~ 378 (612)
|.++.++++.
T Consensus 90 g~~v~~~~~~ 99 (126)
T 2yuy_A 90 GESVIGKTYS 99 (126)
T ss_dssp TEECSSCCHH
T ss_pred CEECCCCCHH
Confidence 9999987663
No 352
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=97.89 E-value=1.5e-05 Score=70.62 Aligned_cols=49 Identities=31% Similarity=0.450 Sum_probs=43.8
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||.++.++++.+++.+|+.+++.|+|+|.|...
T Consensus 66 A~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 66 AAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNASGSIEMQVVAGGD 114 (120)
T ss_dssp HHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEECCTT
T ss_pred HHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 3344689999999999999999999999999999999999999998643
No 353
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.88 E-value=1.3e-05 Score=71.89 Aligned_cols=47 Identities=32% Similarity=0.581 Sum_probs=42.7
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC-------CCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT-------SGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~-------~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++.+++|++++.+|+.+ +..|+|+|.|...
T Consensus 70 ~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 70 KDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 4557999999999999999999999999999976 7899999999765
No 354
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.88 E-value=1e-05 Score=69.15 Aligned_cols=59 Identities=34% Similarity=0.571 Sum_probs=49.5
Q ss_pred eEEEEEEeeCCCC-cceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEG-LGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~g-lG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.+++|.|.|...+ |||++.+ +.+ ...|++|..|.++++|++.| |++|| |||..+.++++
T Consensus 10 ~~~~v~l~~~~~~~lG~~~~~---~~~---~~~gv~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 73 (100)
T 2eeh_A 10 IIHSVRVEKSPAGRLGFSVRG---GSE---HGLGIFVSKVEEGSSAERAG-LCVGDKITEVNGLSLESTTM 73 (100)
T ss_dssp EECCEEECCCSSSSCSEEEEC---CTT---TTCCEEEEEECTTSHHHHHT-CCSSCEEEEETTEECSSCCH
T ss_pred eEEEEEEEECCCCCccEEEEc---ccc---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4566999998855 9999998 433 23589999999999999999 99999 89999988653
No 355
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=97.86 E-value=1.5e-05 Score=69.43 Aligned_cols=58 Identities=22% Similarity=0.404 Sum_probs=48.7
Q ss_pred EEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+++|.|.|+. .||||++.+ +. +..|++|..|.+||+|++.|-|++|| |||.++.++++
T Consensus 2 ~~~v~l~~~~~~glG~~~~~---~~----~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~ 64 (112)
T 1qau_A 2 VISVRLFKRKVGGLGFLVKE---RV----SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSY 64 (112)
T ss_dssp EEEEEEECBTTTBTSEEEEE---CS----SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCH
T ss_pred EEEEEEEcCCCCceeEEEEe---cC----CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 5679998885 899999998 32 23589999999999999999559999 89999988544
No 356
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.86 E-value=5.5e-05 Score=74.10 Aligned_cols=92 Identities=9% Similarity=0.060 Sum_probs=70.8
Q ss_pred CceEEEEEeC-CCChhhhhhHHHHHHHHhhcC--CceEEEecCCCch---------------------------hchhhh
Q psy12938 498 HITVIAHLSS-PSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVG---------------------------DHFSAT 547 (612)
Q Consensus 498 ~~~Vvvhfy~-~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~---------------------------d~~~~~ 547 (612)
..+|||.||+ .||++|....+.|.+++++|. ++.|+-|..+... ..+...
T Consensus 69 Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 148 (222)
T 3ztl_A 69 GKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKA 148 (222)
T ss_dssp TSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHH
Confidence 4589999997 999999999999999999994 5999988776310 134567
Q ss_pred CCCC------CCcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHHCC
Q psy12938 548 FKTS------GLPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 548 ~~i~------~lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
|.+. .+|+++++ ++|+++..+.+.... +-..+++...|.+..
T Consensus 149 ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~---~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 149 YGVFDEEDGNAFRGLFIIDPNGILRQITINDKPV---GRSVDETLRLLDAFQ 197 (222)
T ss_dssp TTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTB---CCCHHHHHHHHHHHH
T ss_pred cCCeecCCCCccceEEEECCCCeEEEEEecCCCC---CCCHHHHHHHHHHhh
Confidence 8887 78988888 799999999886443 234677777766543
No 357
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.85 E-value=1.4e-05 Score=71.41 Aligned_cols=58 Identities=19% Similarity=0.364 Sum_probs=49.5
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
....|.|.++..||||++.+ +.+ ..|++|..|.++|+|++.| |++|| |||.++.++++
T Consensus 9 ~~r~v~l~~~~~g~G~~l~~---~~~----~~gv~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 70 (128)
T 2kjd_A 9 RPRLCTMKKGPSGYGFNLHS---DKS----KPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQH 70 (128)
T ss_dssp CCEEEEEECCSSSCCEEEEE---CSS----SCSEEEEEECTTSHHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred CcEEEEEecCCCcccEEEEe---cCC----CCCEEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 34568999999999999998 332 3489999999999999999 99999 89999988654
No 358
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.85 E-value=1.2e-05 Score=70.77 Aligned_cols=57 Identities=30% Similarity=0.447 Sum_probs=49.2
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+...|.|.+...+|||++.+ +. +.|+||..|.+|++|++.| |++|| |||..+.++++
T Consensus 19 ~~~~v~l~~~~~~lG~~~~~---~~-----~~gv~V~~V~~~spA~~aG-L~~GD~Il~vng~~v~~~~~ 79 (117)
T 1uit_A 19 EPRHVKVQKGSEPLGISIVS---GE-----KGGIYVSKVTVGSIAHQAG-LEYGDQLLEFNGINLRSATE 79 (117)
T ss_dssp CCEEEEEECSSCCCCEEEEE---CT-----TSCEEEEEECTTSHHHHHT-CCTTCEECEETTEETTTCCH
T ss_pred CCEEEEEEeCCCCccEEEEc---cC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 34569999999999999998 32 3489999999999999999 99999 89999988654
No 359
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.85 E-value=1.8e-05 Score=68.17 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=43.5
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHh-----CCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRN-----TSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~-----~~~~v~l~v~R~~~ 97 (612)
++...|+|++||+|++|||+++.+++|++++.+|+. ....++|+|.|...
T Consensus 44 ~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 44 SAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp HHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred hHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 344456799999999999999999999999999998 57889999998754
No 360
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.84 E-value=1.6e-05 Score=77.38 Aligned_cols=42 Identities=12% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
+..+|||+||++||++|+...+.|.+|+++|. .+.|+.|+.+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 34589999999999999999999999999985 4899988764
No 361
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.83 E-value=1.6e-05 Score=67.56 Aligned_cols=56 Identities=21% Similarity=0.339 Sum_probs=46.0
Q ss_pred eeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecccc
Q psy12938 311 LTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGVG 378 (612)
Q Consensus 311 ~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~~ 378 (612)
.+.++|.|.|+..||||+|.+ ...|+||..|.++ |++.| |++|| |||.++.+++|.
T Consensus 9 ~~~~~v~l~~~~~g~G~~i~~---------~~~Gv~V~~v~~~--a~~aG-L~~GD~I~~vng~~v~~~~~~ 68 (96)
T 1ujv_A 9 AELMTLTIVKGAQGFGFTIAD---------SPTGQRVKQILDI--QGCPG-LCEGDLIVEINQQNVQNLSHT 68 (96)
T ss_dssp CCCEEEEEECCSSSSSEEEEE---------ETTEEEEEEESCG--GGSTT-CCSSCEEEEETTEECSSCCHH
T ss_pred ceEEEEEEEeCCCceeEEEEc---------CCCCEEEEEEecc--cccCC-CCCCCEEEEECCEECCCCCHH
Confidence 356779999999999999987 2337999999994 55555 99999 899999997663
No 362
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.83 E-value=3e-05 Score=84.05 Aligned_cols=92 Identities=21% Similarity=0.309 Sum_probs=67.8
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHh--cCCCeEEEEEeecCCC------------Cch---------------------
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLR--NTSGLVRFLIGREKDP------------VNS--------------------- 45 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk--~~~~~v~l~v~r~~~~------------~~~--------------------- 45 (612)
+||+|++|||..+.+.. +...+|. ..+..+.|+|.|+... ...
T Consensus 283 ~GD~I~~vnG~~v~~~~--~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 360 (436)
T 4a8c_A 283 AGDIITSLNGKPLNSFA--ELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKD 360 (436)
T ss_pred CCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccccccccCceeeecccccccC
Confidence 59999999999998764 4444444 4578999998886210 000
Q ss_pred -----hhHHhhhc------ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 46 -----EVAQLIRQ------SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 46 -----~i~~i~~G------~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
.|..+..| +|+.||+|++|||+.+. +.++...+|+..++.+.|+|.|..
T Consensus 361 ~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g 420 (436)
T 4a8c_A 361 GGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVN--SIAEMRKVLAAKPAIIALQIVRGN 420 (436)
T ss_pred CCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHHhCCCeEEEEEEECC
Confidence 01111111 69999999999999997 678999999998889999999864
No 363
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.83 E-value=1e-05 Score=70.61 Aligned_cols=54 Identities=11% Similarity=0.116 Sum_probs=47.1
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+|.|.|++.+|||++.+ ..+++|..|.+|++|++.| |+.|| |||.++.++++
T Consensus 24 ~r~v~l~k~~~~~G~~l~~----------~~~v~V~~V~~gspA~~AG-L~~GD~Il~VnG~~v~~~~~ 81 (109)
T 2vsv_A 24 PRSIRFTAEEGDLGFTLRG----------NAPVQVHFLDPYCSASVAG-AREGDYIVSIQLVDCKWLTL 81 (109)
T ss_dssp CEEEEECCGGGCCCEEEES----------SSSCEEEEECTTSHHHHTT-CCTTCEEEEETTEECTTCCH
T ss_pred CEEEEEEeCCCceeEEEeC----------CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3569999999999999976 2368999999999999999 99999 89999987543
No 364
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.83 E-value=3.1e-05 Score=68.19 Aligned_cols=49 Identities=20% Similarity=0.211 Sum_probs=43.9
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||+++.+++|.+++.+|+.++..|+|+|.|...
T Consensus 62 A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 110 (117)
T 1ujd_A 62 AEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLN 110 (117)
T ss_dssp HHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEEEESSCC
T ss_pred HHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEEEEECCc
Confidence 3345569999999999999999999999999999999999999998654
No 365
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.82 E-value=1.3e-05 Score=72.07 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=41.1
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCC-ceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSG-LVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~-~v~l~v~R~~~ 97 (612)
.|+|++||+|++|||+++.+++|++++.+|+.+.+ .|.|+|.|...
T Consensus 73 aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 73 SETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp SCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEESS
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCCC
Confidence 35899999999999999999999999999999865 59999988643
No 366
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.82 E-value=2.5e-05 Score=67.71 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=42.3
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC-CCceEEEEeecC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT-SGLVRFLIGREK 96 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~-~~~v~l~v~R~~ 96 (612)
+...|+|++||+|++|||+++.++++++++.+|+.+ .+.|+|+|.|..
T Consensus 57 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 57 AERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSGP 105 (108)
T ss_dssp HHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECCC
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 344567999999999999999999999999999996 578999999864
No 367
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.82 E-value=3.4e-05 Score=66.68 Aligned_cols=51 Identities=67% Similarity=0.901 Sum_probs=45.1
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDP 98 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~~ 98 (612)
++...|+|++||+|++|||+++.++++.+++.+++.++..|+|+|.|....
T Consensus 52 pA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~~ 102 (107)
T 1wf8_A 52 AAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNTKGNVRFVIGREKPS 102 (107)
T ss_dssp HHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHCCSEEEEEEEEECCC
T ss_pred HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCCC
Confidence 344455699999999999999999999999999999999999999997653
No 368
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=97.82 E-value=3.2e-05 Score=68.20 Aligned_cols=48 Identities=35% Similarity=0.464 Sum_probs=43.1
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+-..|+|++||+|++|||.++.++++.+++.+|+.++..|+|+|.|..
T Consensus 67 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~ 114 (117)
T 2byg_A 67 AQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNTSEVVYLKVGKPT 114 (117)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 334556999999999999999999999999999999999999999853
No 369
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.81 E-value=1.2e-05 Score=78.64 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=56.9
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEe--cC-------------------------------------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSV--PL------------------------------------- 537 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki--~~------------------------------------- 537 (612)
....+|+.||++||+.|+.+.+.|.+++.. +++|.-+ +.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~~ 162 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPAS 162 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChhH
Confidence 456899999999999999999999999864 4554432 11
Q ss_pred -----CCchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 538 -----GCVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 538 -----~~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
+.. ..+..+|.+.+.||+ ++.||. .+.|.. ..++|+.+|.+
T Consensus 163 ~~~~v~~~-~~l~~~~gV~gtPt~-v~~dG~---~~~G~~-------~~~~l~~~l~~ 208 (216)
T 1eej_A 163 CDVDIADH-YALGVQLGVSGTPAV-VLSNGT---LVPGYQ-------PPKEMKEFLDE 208 (216)
T ss_dssp CSCCHHHH-HHHHHHHTCCSSSEE-ECTTSC---EEESCC-------CHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHHHcCCCccCEE-EEcCCe---EecCCC-------CHHHHHHHHHH
Confidence 011 135678999999999 567884 344542 34788888765
No 370
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=97.81 E-value=2.7e-05 Score=66.04 Aligned_cols=47 Identities=26% Similarity=0.421 Sum_probs=42.8
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++.++++.+++.+++..++.|+|+|.|..+
T Consensus 46 ~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~p 92 (96)
T 2qkv_A 46 IDSKLQRGDIITKFNGDALEGLPFQVSYALFKGANGKVSMEVTRPKP 92 (96)
T ss_dssp HHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred hcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEEEEEeCCc
Confidence 34569999999999999999999999999999999999999998654
No 371
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.81 E-value=2.4e-05 Score=67.25 Aligned_cols=45 Identities=24% Similarity=0.354 Sum_probs=41.8
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
|+|++||+|++|||.++.++++.+++.+|+.+++.|+|+|.|...
T Consensus 52 ~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 52 GGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAL 96 (103)
T ss_dssp TCCCSSEEEEEETTEESTTSCHHHHHHHHHHCCSEEEEEEEECC-
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCC
Confidence 579999999999999999999999999999999999999998654
No 372
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.79 E-value=4.6e-05 Score=71.56 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=57.4
Q ss_pred CceEEEEEeCCC-ChhhhhhHHHHHHHHhhcCCceEEEecCCCc---------------------hhchhhhCCCCCC--
Q psy12938 498 HITVIAHLSSPS-LPACRALNSSLAELSRSHTNVKFVSVPLGCV---------------------GDHFSATFKTSGL-- 553 (612)
Q Consensus 498 ~~~Vvvhfy~~~-~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~---------------------~d~~~~~~~i~~l-- 553 (612)
+.++|+.||+.| |++|+...+.|.+++++ .++.|+.|..+.. ...+...|.+...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~ 122 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADG 122 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCSS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccccc
Confidence 347999999999 99999999999999988 8899999987621 0135677888766
Q ss_pred -------cEE-EEEECCEEeeEEEe
Q psy12938 554 -------PAM-LAYRGGEVVGNFVR 570 (612)
Q Consensus 554 -------Ptl-lvyk~G~~~~~~vg 570 (612)
|++ ++-++|+++..++|
T Consensus 123 ~~~g~~~p~~~lid~~G~I~~~~~g 147 (175)
T 1xvq_A 123 PMAGLLARAIVVIGADGNVAYTELV 147 (175)
T ss_dssp TTTTSBCSEEEEECTTSBEEEEEEC
T ss_pred ccCCcccceEEEECCCCeEEEEEEC
Confidence 554 55589999998875
No 373
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=97.78 E-value=3.2e-05 Score=64.50 Aligned_cols=45 Identities=27% Similarity=0.347 Sum_probs=41.6
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
..|+|++||+|++|||.++.++++.+++.+++.++..++|+|.|.
T Consensus 45 ~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 45 QTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYM 89 (90)
T ss_dssp HTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEC
T ss_pred hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEEe
Confidence 335899999999999999999999999999999999999999885
No 374
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=97.78 E-value=4.1e-05 Score=66.23 Aligned_cols=50 Identities=30% Similarity=0.413 Sum_probs=44.3
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++-..|+|++||+|++|||.++.++++.+++.+++.+++.|+|+|.|...
T Consensus 44 pA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 93 (106)
T 4amh_A 44 AAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSDFVYLKVAKPGS 93 (106)
T ss_dssp HHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCSEEEEEEECCSS
T ss_pred HHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 34445679999999999999999999999999999999999999998643
No 375
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.78 E-value=1.4e-05 Score=86.86 Aligned_cols=54 Identities=28% Similarity=0.513 Sum_probs=47.0
Q ss_pred EEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..|.|.|+ .||||+|.| |. +.||||.+|.+||+|++.| |++|| |||.++.++++
T Consensus 3 r~V~l~k~-~~lG~~i~g---g~-----~~Gi~V~~V~~gspA~~aG-L~~GD~Il~VNG~~v~~~t~ 60 (468)
T 3shw_A 3 KLVKFRKG-DSVGLRLAG---GN-----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIR 60 (468)
T ss_dssp EEEEEECC-SSCCEEEEE---ET-----TTEEEEEEECSSSHHHHTT-CCTTEEEEEETTEECTTCCH
T ss_pred eEEEEecC-CccceEEEc---cC-----cCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 45888897 789999999 43 3589999999999999999 99999 89999988544
No 376
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.78 E-value=1.6e-05 Score=73.17 Aligned_cols=86 Identities=15% Similarity=0.206 Sum_probs=55.3
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCc-h---hchhhhCCCCCCcEEEEEECCEEeeEEEecccccc
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCV-G---DHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELG 576 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~-~---d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g 576 (612)
|++ |+++||+.|+.+.+.|+.+.-.| .++.|+.+.. + +.+...+.+..+|++ |.+|+.++.+-.+.+...
T Consensus 51 Vvv-f~~~~Cp~C~~~k~~L~~~~i~~---~~vdId~~~~~~~~~~~L~~~~g~~tvP~i--fi~G~~igG~d~l~~l~~ 124 (146)
T 2ht9_A 51 VVI-FSKTSCSYCTMAKKLFHDMNVNY---KVVELDLLEYGNQFQDALYKMTGERTVPRI--FVNGTFIGGATDTHRLHK 124 (146)
T ss_dssp EEE-EECTTCHHHHHHHHHHHHHTCCC---EEEEGGGCTTHHHHHHHHHHHHSCCCSCEE--EETTEEEESHHHHHHHHH
T ss_pred EEE-EECCCChhHHHHHHHHHHcCCCe---EEEECccCcCCHHHHHHHHHHhCCCCcCeE--EECCEEEeCchHHHHHHH
Confidence 555 99999999999999999985432 3344443311 2 136678899999998 469987764322211111
Q ss_pred CCCCHHHHHHHHHHCCcccC
Q psy12938 577 EGYFVEDVEAFLVEAGLLRA 596 (612)
Q Consensus 577 ~~~~~~~lE~~L~~~g~l~~ 596 (612)
. ..|+.+|.+.|+...
T Consensus 125 ~----g~L~~~L~~~g~~~~ 140 (146)
T 2ht9_A 125 E----GKLLPLVHQCYLKKS 140 (146)
T ss_dssp T----TCHHHHHHHTTC---
T ss_pred c----ChHHHHHHHcCcchh
Confidence 1 358889988887544
No 377
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.78 E-value=2.2e-05 Score=69.28 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=43.2
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC----CCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT----SGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~----~~~v~l~v~R~~~ 97 (612)
++-..|+|++||+|++|||.++.+++|++++.+|+.. +..|+|+|.|..+
T Consensus 55 pA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~~ 108 (118)
T 1v6b_A 55 AAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPP 108 (118)
T ss_dssp HHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCCS
T ss_pred HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCCc
Confidence 3444568999999999999999999999999999875 7799999998644
No 378
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.78 E-value=5.3e-06 Score=73.32 Aligned_cols=63 Identities=21% Similarity=0.290 Sum_probs=47.5
Q ss_pred EEEEeCCCChhhhhh-HHHHHHHHhhcCCceEEEecCCCch------hchhhhCCCCCCcEEEEEECCEEeeEE
Q psy12938 502 IAHLSSPSLPACRAL-NSSLAELSRSHTNVKFVSVPLGCVG------DHFSATFKTSGLPAMLAYRGGEVVGNF 568 (612)
Q Consensus 502 vvhfy~~~~~~C~~m-~~~l~~LA~~~~~vkF~ki~~~~~~------d~~~~~~~i~~lPtllvyk~G~~~~~~ 568 (612)
|+-|+.+||+.|+.+ .+.|+.+.. +.+.|..++.+..+ +.+.+.+....+|++ |.+|+.++.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~--~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~igG~ 96 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV--PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHIGGN 96 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC--CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEESH
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC--CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEEEEcH
Confidence 445999999999999 888877652 34778877776432 246678899999986 7899987633
No 379
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.76 E-value=4.8e-05 Score=69.94 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=56.9
Q ss_pred eEEEEEe-CCCChhhhhhHHHHHHHHhhcCC-ceEEEecCCCc--------------------hhchhhhCCCCCCc---
Q psy12938 500 TVIAHLS-SPSLPACRALNSSLAELSRSHTN-VKFVSVPLGCV--------------------GDHFSATFKTSGLP--- 554 (612)
Q Consensus 500 ~Vvvhfy-~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~~~~--------------------~d~~~~~~~i~~lP--- 554 (612)
+||++|| +.||+.|...-+.|.++.++|.. -.|+-|..+.. ...+...|.+...|
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~g 116 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLSG 116 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSSC
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccCC
Confidence 7899987 89999999999999999888752 16776665421 01345678888888
Q ss_pred ----EEEEEECCEEeeEEEecccc
Q psy12938 555 ----AMLAYRGGEVVGNFVRLGEE 574 (612)
Q Consensus 555 ----tllvyk~G~~~~~~vg~~~~ 574 (612)
++++ ++|+++..+.|....
T Consensus 117 ~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 117 SIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp BCCEEEEE-ETTEEEEEEESCCHH
T ss_pred ccceEEEE-cCCEEEEEEccCCcc
Confidence 7888 999999999886433
No 380
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=1.4e-05 Score=70.26 Aligned_cols=60 Identities=13% Similarity=0.261 Sum_probs=49.7
Q ss_pred eEEEEEEeeCCC---CcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAE---GLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~---glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++.|.|.|... +|||+|.+ ..+. +..|++|..|.++++|++.| |++|| |||..+..+++
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~---~~~~--~~~gv~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~ 81 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSS---VEED--GIRRLYVNSVKETGLASKKG-LKAGDEILEINNRAADALNS 81 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEE---EEET--TEEEEEEEECCTTSSHHHHT-CCTTCCEEEESSCBGGGCCH
T ss_pred ceEEEEEEeCCCCccccCEEEEe---cCcC--CcCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCcCH
Confidence 567799999875 79999998 2221 22589999999999999999 99999 89999988653
No 381
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.75 E-value=4e-05 Score=66.39 Aligned_cols=48 Identities=25% Similarity=0.389 Sum_probs=43.4
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
...|+|++||+|++|||+++.++++.+++.+++..++.|.|+|.|...
T Consensus 39 ~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 86 (106)
T 2la8_A 39 EIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPKP 86 (106)
T ss_dssp HHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHSCBSCEEEEEEECCS
T ss_pred HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCCeEEEEEEeCCC
Confidence 345569999999999999999999999999999999999999999754
No 382
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.74 E-value=1.8e-05 Score=68.22 Aligned_cols=56 Identities=16% Similarity=0.191 Sum_probs=47.8
Q ss_pred EEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..|.|.|.. .+|||.+.+ +. ...|+||..|.+||+|++.| |++|| |||.++.+++|
T Consensus 3 r~v~l~~~~~~~~G~~l~~---~~----~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~~ 63 (106)
T 3ngh_A 3 RESKLSKQEGQNYGFFLRI---EK----DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEH 63 (106)
T ss_dssp EEEEEECCTTCCCCCEEEC---CT----TCCSCEEECCCTTSHHHHTT-CCTTCEEEEETTEECTTSCH
T ss_pred EEEEEEeCCCCeeCEEEEE---Ee----CCCCEEEEEeCCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 358888888 789999998 33 23489999999999999999 99999 89999988764
No 383
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=97.74 E-value=6.6e-05 Score=63.34 Aligned_cols=48 Identities=29% Similarity=0.475 Sum_probs=42.7
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
-..|+|++||+|++|||+++.++++.+++.+++.++..|.|+|.|...
T Consensus 47 ~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 47 ESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQS 94 (96)
T ss_dssp HHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEECCSC
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 344569999999999999999999999999999988999999988643
No 384
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.74 E-value=4.2e-05 Score=66.53 Aligned_cols=49 Identities=20% Similarity=0.284 Sum_probs=42.3
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCC----CceEEEEeecC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTS----GLVRFLIGREK 96 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~----~~v~l~v~R~~ 96 (612)
++...|+|++||+|++|||+++.+++|++++.+|+.+. ..++|.+.|..
T Consensus 53 ~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 53 DCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp HHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred hHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 34455679999999999999999999999999999865 67889888864
No 385
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=97.73 E-value=5e-05 Score=67.85 Aligned_cols=47 Identities=30% Similarity=0.511 Sum_probs=42.7
Q ss_pred hhcccCCCCEEEEECCeecC-CCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLV-GVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~-~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++. ++++.+++.+|+.++..|+|+|.|...
T Consensus 69 ~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 69 RDQRLKENDQILAINHTPLDQNISHQQAIALLQQTTGSLRLIVAREPV 116 (128)
T ss_dssp HTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHHCCSEEEEEEEECCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 34569999999999999997 999999999999999999999998754
No 386
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=97.73 E-value=4.2e-05 Score=65.47 Aligned_cols=45 Identities=22% Similarity=0.375 Sum_probs=41.1
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCceEEEEeecC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRN--TSGLVRFLIGREK 96 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~--~~~~v~l~v~R~~ 96 (612)
.|+|++||+|++|||+++.+.++++++.+|+. .+..|+|+|.|..
T Consensus 53 ~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~ 99 (101)
T 2yt7_A 53 SGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHCP 99 (101)
T ss_dssp GSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 36799999999999999999999999999998 6789999998864
No 387
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=97.73 E-value=2.3e-05 Score=68.43 Aligned_cols=50 Identities=64% Similarity=0.902 Sum_probs=44.7
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++-..|+|++||+|++|||.++.++++.+++.+++.++..|+|+|.|...
T Consensus 47 ~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 47 AAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNTKGRVRFMIGRERP 96 (113)
T ss_dssp HHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHSCSSCEEEEEECCC
T ss_pred HHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeCCC
Confidence 34445679999999999999999999999999999999999999999765
No 388
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.73 E-value=9.2e-06 Score=69.48 Aligned_cols=57 Identities=21% Similarity=0.334 Sum_probs=45.2
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeec
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGM 375 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~ 375 (612)
..++|.+.+ ..+|||+|.| +.+. ..+++|.+|.++++|++.|.|++|| |||..+.++
T Consensus 11 ~~~~v~~~~-~~~~G~~~~g---g~~~---~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~ 71 (100)
T 2edp_A 11 QYVPVQLQG-GAPWGFTLKG---GLEH---CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS 71 (100)
T ss_dssp EEEEEECCS-CSCCCCCEEE---EGGG---TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC
T ss_pred EEEEEEECC-CCCcCEEEec---cCCC---CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch
Confidence 445555543 3689999999 4442 3589999999999999996699999 899999874
No 389
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.73 E-value=4.9e-05 Score=66.96 Aligned_cols=47 Identities=26% Similarity=0.265 Sum_probs=42.9
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+.+.++++++++.+|+..+..|+|+|.|...
T Consensus 57 ~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 57 RSGALHPGDHILSIDGTSMEHCSLLEATKLLASISEKVRLEILPVPQ 103 (117)
T ss_dssp HHTCCCTTCBEEEETTEETTSCCHHHHHHHHHSCSSEEEEEECCBTT
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEECCC
Confidence 34569999999999999999999999999999889999999998654
No 390
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=97.73 E-value=5.4e-05 Score=68.13 Aligned_cols=49 Identities=20% Similarity=0.306 Sum_probs=42.8
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCC--CceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTS--GLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~--~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||+++.+++|++++.+|+.+. ..|+|+|.|...
T Consensus 78 A~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 78 ADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp HHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 3345569999999999999999999999999999875 889999998643
No 391
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=97.72 E-value=6.8e-05 Score=62.70 Aligned_cols=48 Identities=31% Similarity=0.401 Sum_probs=43.0
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+-..|.|++||+|++|||+++.++++.++..+++.++..|+|+|.|..
T Consensus 42 A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 89 (92)
T 2qg1_A 42 ADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTLEVGRIS 89 (92)
T ss_dssp HHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEccc
Confidence 334556999999999999999999999999999999999999999865
No 392
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=97.72 E-value=6.6e-05 Score=66.19 Aligned_cols=47 Identities=38% Similarity=0.528 Sum_probs=42.5
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
-..|+|++||+|++|||.++.++++.+++.+|+.+++.|+|+|.|..
T Consensus 67 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 113 (117)
T 2fne_A 67 SEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKGTVTLMVLSSD 113 (117)
T ss_dssp HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECS
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 34556999999999999999999999999999999889999999864
No 393
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=97.72 E-value=9.4e-05 Score=62.60 Aligned_cols=47 Identities=21% Similarity=0.355 Sum_probs=42.1
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||..+.++++.+++.+|+..+..|.|+|.|...
T Consensus 45 ~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 45 RTGAIHIGDRILAINSSSLKGKPLSEAIHLLQMAGETVTLKIKKQTD 91 (97)
T ss_dssp HHTCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCC
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 34569999999999999999999999999999888899999988654
No 394
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.70 E-value=4e-05 Score=65.84 Aligned_cols=61 Identities=23% Similarity=0.256 Sum_probs=47.2
Q ss_pred EEEeeCC-CCcceEEEeccCC-CCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VELMKGA-EGLGLSIIGMGVG-ADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l~k~~-~glG~si~g~~~g-~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
|.|.|.. .+|||+|.+...- .+......|++|..|.++++|++.| |++|| |||.++.++++
T Consensus 19 v~l~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~V~~V~~~spA~~aG-l~~GD~I~~vng~~v~~~~~ 85 (104)
T 2z17_A 19 VTVEKQDNETFGFEIQSYRPQNQNACSSEMFTLICKIQEDSPAHCAG-LQAGDVLANINGVSTEGFTY 85 (104)
T ss_dssp EEEECCTTSCCSEEEEECCCCCCSSSCCSCCEEEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCH
T ss_pred EEEEeCCCCCccEEEEeeecccCCcccCCCCeEEEEECCCChHHHcC-CCCCCEEEEECCEEcCCCCH
Confidence 7788875 6799999983110 0011134699999999999999999 99999 89999987665
No 395
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=97.68 E-value=4.1e-05 Score=63.86 Aligned_cols=43 Identities=21% Similarity=0.439 Sum_probs=40.4
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||.++.+++|+++..+|+..+..|.|+|.|..
T Consensus 45 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 87 (90)
T 2he4_A 45 GLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVGPS 87 (90)
T ss_dssp TCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEccC
Confidence 4999999999999999999999999999998899999999864
No 396
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.68 E-value=5.3e-05 Score=72.82 Aligned_cols=91 Identities=12% Similarity=0.064 Sum_probs=61.6
Q ss_pred CceEEEEEeCCCChh-hhhhHHHHHHHHhhc-----CCceEEEecCCC---ch------------------------hch
Q psy12938 498 HITVIAHLSSPSLPA-CRALNSSLAELSRSH-----TNVKFVSVPLGC---VG------------------------DHF 544 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~-C~~m~~~l~~LA~~~-----~~vkF~ki~~~~---~~------------------------d~~ 544 (612)
+.+|||+||++||++ |....+.|.++.+++ .++.|+.|..+. .+ ..+
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~ 120 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNA 120 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHHH
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHHH
Confidence 458999999999997 999999999976655 268888887652 00 124
Q ss_pred hhhCCCC-CCc----------------EEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHHC
Q psy12938 545 SATFKTS-GLP----------------AMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEA 591 (612)
Q Consensus 545 ~~~~~i~-~lP----------------tllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~ 591 (612)
+..|.+. ..| ++|+.++|+++..+.|.. ..+-..+.|+.+|...
T Consensus 121 ~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~---~~~~~~~~i~~~l~~l 181 (200)
T 2b7k_A 121 CKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY---DEKTGVDKIVEHVKSY 181 (200)
T ss_dssp HHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC---CTTHHHHHHHHHHHHC
T ss_pred HHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC---CHHHHHHHHHHHHHHh
Confidence 5667776 444 477889999999876532 1223346677777653
No 397
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.68 E-value=7.8e-05 Score=63.24 Aligned_cols=46 Identities=15% Similarity=0.310 Sum_probs=41.4
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R~~~ 97 (612)
.++|++||+|++|||+++.+++|++++.+|+.. +..|+|+|.|...
T Consensus 45 ~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 45 CPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp STTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 458999999999999999999999999999984 6789999998643
No 398
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.68 E-value=5.6e-05 Score=62.53 Aligned_cols=42 Identities=26% Similarity=0.429 Sum_probs=39.4
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEee
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGR 94 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R 94 (612)
++|++||+|++|||+++.++++.+++.+++.+++.++|+|.+
T Consensus 45 agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 45 GGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVY 86 (87)
T ss_dssp SCCCTTEEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEE
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 579999999999999999999999999999999999998864
No 399
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=97.67 E-value=9.8e-05 Score=63.05 Aligned_cols=49 Identities=22% Similarity=0.386 Sum_probs=43.9
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+...|.|++||+|++|||.++.++++.+++.+++.++..|.|+|.|...
T Consensus 47 A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 47 AAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKEAGPVVRLVVRRRQP 95 (102)
T ss_dssp HHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 3345569999999999999999999999999999999999999998755
No 400
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=97.66 E-value=8.2e-05 Score=64.07 Aligned_cols=49 Identities=35% Similarity=0.558 Sum_probs=43.7
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||+++.++++.+++.+++.++..|.|+|.|...
T Consensus 51 A~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 51 ADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGA 99 (106)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECCCS
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 3445569999999999999999999999999999999999999998644
No 401
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.66 E-value=2e-05 Score=70.42 Aligned_cols=59 Identities=22% Similarity=0.400 Sum_probs=49.6
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++++|.|.|+. .||||++.+ .. +..|++|..|.+||+|++.|-|++|| |||..+.++++
T Consensus 8 ~~~~v~l~~~~~~glG~~~~~---~~----~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~ 71 (127)
T 1b8q_A 8 NVISVRLFKRKVGGLGFLVKE---RV----SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSY 71 (127)
T ss_dssp CSEEEEEECTTTSCCSCCEEE---CT----TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCH
T ss_pred ceEEEEEEeCCCCcEeEEEEe---cC----CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 45679999987 899999998 32 23589999999999999999559999 89999988544
No 402
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.66 E-value=5.1e-05 Score=65.14 Aligned_cols=46 Identities=24% Similarity=0.458 Sum_probs=41.9
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R~~~ 97 (612)
.|+|++||+|++|||+++.++++++++.+|+.+ +..|+|+|.|...
T Consensus 50 aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 50 DGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp GTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 456999999999999999999999999999987 7899999998754
No 403
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.66 E-value=5.4e-05 Score=66.11 Aligned_cols=55 Identities=27% Similarity=0.453 Sum_probs=45.6
Q ss_pred EEE-eeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VEL-MKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l-~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
|.+ .++..||||+|.+ +.+ ...|++|..|.++++|++.| |++|| |||..+.++.+
T Consensus 19 v~~~~~~~~~lG~~l~~---~~~---~~~gv~V~~V~~~s~A~~aG-L~~GD~Il~vng~~v~~~~~ 78 (114)
T 1x5n_A 19 VFISLVGSRGLGCSISS---GPI---QKPGIFISHVKPGSLSAEVG-LEIGDQIVEVNGVDFSNLDH 78 (114)
T ss_dssp EEECCCSSCCCCEEEEE---CCS---SSCSEEEEEECTTSTTTTTT-CCTTCEEEEETTEETTSCCT
T ss_pred EEEEEcCCCceeEEEee---cCC---CCCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 555 4456899999999 443 34589999999999999999 99999 89999988654
No 404
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.66 E-value=7.6e-05 Score=66.38 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=43.5
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||.++.+++|++++.+|+.+++.|+|+|.|...
T Consensus 58 A~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 106 (125)
T 3hpk_A 58 AALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGEVTIHYNKLQA 106 (125)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEECS
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 3445569999999999999999999999999999999999999998543
No 405
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=97.66 E-value=9.6e-05 Score=62.24 Aligned_cols=50 Identities=24% Similarity=0.338 Sum_probs=44.2
Q ss_pred HHhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 48 AQLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 48 ~~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++...|.|++||+|++|||.++.++++.+++.+++.++..++|+|.|...
T Consensus 41 pA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 41 LAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIARPGK 90 (95)
T ss_dssp HHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEEEEESC
T ss_pred hHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCc
Confidence 34445569999999999999999999999999999999999999998654
No 406
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.66 E-value=5.3e-05 Score=82.43 Aligned_cols=92 Identities=12% Similarity=0.257 Sum_probs=68.3
Q ss_pred CCCeEEEECCeecCCCCHHHHHHHHh--cCCCeEEEEEeecCCCCc--------h-------------------------
Q psy12938 1 VNDQIIEVDGKSLVGVTQEYAASVLR--NTSGLVRFLIGREKDPVN--------S------------------------- 45 (612)
Q Consensus 1 ~gD~Il~VNg~~l~~~th~~av~~Lk--~~~~~v~l~v~r~~~~~~--------~------------------------- 45 (612)
+||.|++|||..+.+. .+...+|. ..+..|.|+|.|+..... .
T Consensus 302 ~GDvI~~vnG~~v~~~--~~l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~G~~l~~~~~~~ 379 (451)
T 3pv2_A 302 AGDIITQINDTKITQA--TQVKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPFLYGLALRAFEQES 379 (451)
T ss_dssp TTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHHSTTTTTEEEEEEEEEC
T ss_pred CCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCccccccccccccccccccccCChhH
Confidence 5999999999999876 44555554 467899999988731100 0
Q ss_pred ---------hhHHhhhc------ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 46 ---------EVAQLIRQ------SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 46 ---------~i~~i~~G------~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
.|..+..| +|++||+|++|||+.+. +.++...+|+..+..+.|+|.|..
T Consensus 380 ~~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~--~~~~~~~~l~~~~~~v~l~v~R~g 443 (451)
T 3pv2_A 380 PPHGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVT--DVKSLQTIAQEKKKELLVQVLRGP 443 (451)
T ss_dssp TTSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECC--SHHHHHHHTTSSCSCEEEEEEETT
T ss_pred hcccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECC--CHHHHHHHHhcCCCeEEEEEEECC
Confidence 01111112 69999999999999998 568999999988889999998853
No 407
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.66 E-value=2.6e-05 Score=76.48 Aligned_cols=58 Identities=19% Similarity=0.362 Sum_probs=50.0
Q ss_pred eEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
....|.|.|+..||||.|.+ +. +..|+||..|.+|++|++.| |+.|| |||..+.++++
T Consensus 9 ~~r~v~l~k~~~glG~~l~~---~~----~~~gv~V~~V~~gSpA~~aG-L~~GD~Il~VNG~~V~~~s~ 70 (216)
T 2krg_A 9 RPRLCTMKKGPSGYGFNLHS---DK----SKPGQFIRSVDPDSPAEASG-LRAQDRIVEVNGVCMEGKQH 70 (216)
T ss_dssp CCEEEEEECCSSSSCEEECC---CS----SSCSCBEEEECTTSHHHHHT-CCTTCBCCEETTEECTTCCT
T ss_pred ceEEEEEEeCCCCceEEEEe---cC----CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 44568999999999999988 33 23489999999999999999 99999 89999997665
No 408
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=6.8e-05 Score=62.78 Aligned_cols=46 Identities=26% Similarity=0.445 Sum_probs=41.7
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
..|+|++||+|++|||+++.++++.+++.+++..++.+.|+|.|..
T Consensus 45 ~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 45 RHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSVKLVVRSGP 90 (93)
T ss_dssp HHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEEEEEECCCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEeCC
Confidence 3456999999999999999999999999999998889999998864
No 409
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.65 E-value=7.5e-05 Score=69.19 Aligned_cols=88 Identities=10% Similarity=0.133 Sum_probs=63.2
Q ss_pred CceEEEEEeCCCCh-hhhhhHHHHHHHHhhcC----CceEEEecCCC---chh------------------------chh
Q psy12938 498 HITVIAHLSSPSLP-ACRALNSSLAELSRSHT----NVKFVSVPLGC---VGD------------------------HFS 545 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~-~C~~m~~~l~~LA~~~~----~vkF~ki~~~~---~~d------------------------~~~ 545 (612)
+.+|||+||++||+ .|....+.|.++.++|. ++.|+.|..+. .++ .+.
T Consensus 33 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~ 112 (174)
T 1xzo_A 33 GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEI 112 (174)
T ss_dssp TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHH
T ss_pred CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHH
Confidence 45899999999999 99999999999998875 39999987651 100 000
Q ss_pred hh----------------CCCCCCcE-EEEEECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 546 AT----------------FKTSGLPA-MLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 546 ~~----------------~~i~~lPt-llvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
.. |.+...|+ +|+-++|+++..+.|... ...++|+..|.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~-----~~~~~l~~~l~~ 169 (174)
T 1xzo_A 113 EEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVEN-----TPYDDIISDVKS 169 (174)
T ss_dssp HHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSS-----CCHHHHHHHHHH
T ss_pred HHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCC-----CCHHHHHHHHHH
Confidence 11 24567887 555599999999988642 235777777764
No 410
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=97.65 E-value=6.7e-05 Score=63.99 Aligned_cols=47 Identities=19% Similarity=0.391 Sum_probs=41.5
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+-..|+|++||+|++|||.++.++++++++.+|+..++.|+|+|.+.
T Consensus 49 A~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 49 IHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp HHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHCCEEEEEEEECC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 33455699999999999999999999999999999888999998753
No 411
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=97.65 E-value=8.8e-05 Score=63.79 Aligned_cols=49 Identities=31% Similarity=0.421 Sum_probs=43.8
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||.++.++++.+++.+++.++..|.|+|.|...
T Consensus 46 A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 94 (105)
T 2awx_A 46 AHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNTSDFVYLKVAKPTS 94 (105)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSCCSEEEEEEECCCC
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcCCC
Confidence 3345569999999999999999999999999999999999999998754
No 412
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.65 E-value=1.9e-05 Score=76.96 Aligned_cols=82 Identities=17% Similarity=0.208 Sum_probs=58.8
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEE--ecCC------------------------------------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVS--VPLG------------------------------------ 538 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~k--i~~~------------------------------------ 538 (612)
....+|+.|+++||+.|+.+.+.|+++++. +++|.- ++..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~~ 162 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEVK 162 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSCC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChHH
Confidence 455899999999999999999999998764 344432 2210
Q ss_pred ------CchhchhhhCCCCCCcEEEEEECCEEeeEEEeccccccCCCCHHHHHHHHHHCC
Q psy12938 539 ------CVGDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGEGYFVEDVEAFLVEAG 592 (612)
Q Consensus 539 ------~~~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~~g 592 (612)
.. ..+..+|.+.+.||+++ .||+ .+.|. ...++|+.+|.+..
T Consensus 163 ~~~~v~~~-~~l~~~~gV~gTPt~vi-~nG~---~~~G~-------~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 163 TPNIVKKH-YELGIQFGVRGTPSIVT-STGE---LIGGY-------LKPADLLRALEETA 210 (211)
T ss_dssp CSSHHHHH-HHHHHHHTCCSSCEEEC-TTSC---CCCSC-------CCHHHHHHHHHHCC
T ss_pred HHHHHHHH-HHHHHHcCCCcCCEEEE-eCCE---EecCC-------CCHHHHHHHHHhcc
Confidence 01 13457899999999998 7886 23333 24588999987653
No 413
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=97.64 E-value=0.00012 Score=62.35 Aligned_cols=47 Identities=23% Similarity=0.391 Sum_probs=42.4
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||..+.++++.+++.+++..+..|.|+|.|...
T Consensus 52 ~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 52 LDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLE 98 (101)
T ss_dssp HHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTCCSEEEEEEEEESC
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 34569999999999999999999999999999888899999998654
No 414
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.64 E-value=5.1e-05 Score=71.81 Aligned_cols=41 Identities=10% Similarity=0.129 Sum_probs=36.4
Q ss_pred CceEEEEEeCCCChhhhhhHHHHHHHHhhcC--CceEEEecCC
Q psy12938 498 HITVIAHLSSPSLPACRALNSSLAELSRSHT--NVKFVSVPLG 538 (612)
Q Consensus 498 ~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~ 538 (612)
..+|+|.||++||++|+...+.|.+++++|. .++|+.|..+
T Consensus 49 Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d 91 (185)
T 2gs3_A 49 GFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCN 91 (185)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECc
Confidence 4589999999999999999999999999986 4899998754
No 415
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.64 E-value=8.3e-05 Score=63.95 Aligned_cols=46 Identities=26% Similarity=0.468 Sum_probs=42.3
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.|.|++||+|++|||+++.++++.+++.+|+.++..|+|+|.|...
T Consensus 54 aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 54 AGTLQVGDRVLSINGVDVTEARHDHAVSLLTAASPTIALLLEREAG 99 (105)
T ss_dssp HSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSCCSCEEEEEEECCC
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 4459999999999999999999999999999988999999999754
No 416
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.63 E-value=7.2e-05 Score=65.69 Aligned_cols=46 Identities=24% Similarity=0.427 Sum_probs=42.4
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.|+|++||+|++|||.++.++++.+++.+|+.++..|+|+|.|...
T Consensus 66 aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 66 TNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSS 111 (117)
T ss_dssp SCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTSCSSEEEEECCBSC
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 3459999999999999999999999999999999999999998765
No 417
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=97.63 E-value=6.5e-05 Score=62.69 Aligned_cols=43 Identities=26% Similarity=0.416 Sum_probs=39.2
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||.++.++++.+++.+|+.+.+.+.+++.|..
T Consensus 44 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~ 86 (91)
T 1g9o_A 44 GLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPE 86 (91)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCC
Confidence 4999999999999999999999999999999888888877654
No 418
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=97.63 E-value=0.00011 Score=60.52 Aligned_cols=45 Identities=16% Similarity=0.340 Sum_probs=39.8
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEee
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGR 94 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R 94 (612)
...|.|++||+|++|||..+.+++++++..+|+.. +..+.|+|.|
T Consensus 39 ~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 39 ALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp HHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 34456999999999999999999999999999986 6789999875
No 419
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.62 E-value=1.2e-05 Score=68.88 Aligned_cols=57 Identities=19% Similarity=0.302 Sum_probs=49.2
Q ss_pred ceeEEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 310 KLTLLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 310 ~~~~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
..+.+.|.|.++..||||.+.+ . .+++|..|.++++|++.| |++|| |||..+.++++
T Consensus 13 ~~~~~~v~l~~~~~g~G~~~~~---~-------~~~~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 73 (100)
T 1whd_A 13 NGEKLQITIRRGKDGFGFTICC---D-------SPVRVQAVDSGGPAERAG-LQQLDTVLQLNERPVEHWKC 73 (100)
T ss_dssp CCEEEEEEEECCSSSSSCBCCC---S-------SSCBCCBCCTTSHHHHHT-CCSSCEEEEETTEECTTCCH
T ss_pred ccceEEEEEECCCCeeeEEEeC---C-------CCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 3456779999999999999977 2 469999999999999999 99999 89999987654
No 420
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.62 E-value=1.3e-05 Score=67.66 Aligned_cols=51 Identities=29% Similarity=0.337 Sum_probs=43.5
Q ss_pred eCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 320 KGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 320 k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++..+|||+|.+ +.+ ...|++|..|.++++|++.| |++|| |||..+.++++
T Consensus 13 ~~~~~lG~~l~~---g~~---~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 67 (94)
T 1vb7_A 13 AGPAPWGFRISG---GRD---FHTPIIVTKVTERGKAEAAD-LRPGDIIVAINGQSAENMLH 67 (94)
T ss_dssp CSSSCCSBCCEE---ETT---TTEEEECCCBCTTSSHHHHT-CCTTCEEEEETTEECTTCCH
T ss_pred cCCCCccEEEec---ccC---CCCCeEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 456799999999 544 24589999999999999999 99999 89999988654
No 421
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=97.62 E-value=0.00013 Score=61.55 Aligned_cols=48 Identities=25% Similarity=0.377 Sum_probs=43.0
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
-..|+|++||+|++|||.++.+++++++..+|+..+..+.|+|.|...
T Consensus 46 ~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 46 DREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCGQEAALLIEYDVS 93 (97)
T ss_dssp HHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHHSCSEEEEEEEEECC
T ss_pred HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 334569999999999999999999999999999988999999998654
No 422
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=97.61 E-value=9.3e-05 Score=66.30 Aligned_cols=49 Identities=14% Similarity=0.287 Sum_probs=42.9
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R~~~ 97 (612)
+...|+|++||+|++|||+++.+++|.+++.+|+.+ +..|+|+|.|...
T Consensus 56 A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 56 AALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp HHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 334456999999999999999999999999999987 6789999998754
No 423
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=97.61 E-value=0.00021 Score=63.48 Aligned_cols=49 Identities=27% Similarity=0.373 Sum_probs=43.2
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|+|++||+|++|||.++.++++++++.+|+..++.|.|+|.|...
T Consensus 72 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 72 AGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEECCCC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 3345559999999999999999999999999999988899999988643
No 424
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.60 E-value=8.2e-05 Score=63.01 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=41.9
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
++|++||+|++|||+.+.++++.+++.+++..+..|.|+|.|..
T Consensus 46 agL~~GD~Il~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 46 GKLFPGDQILQMNNEPAEDLSWERAVDILREAEDSLSITVVRCT 89 (96)
T ss_dssp TTSCTTCBEEEESSCBSTTCCHHHHHHHHHHCSSCEEEEEEECC
T ss_pred hCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 58999999999999999999999999999999999999999976
No 425
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=97.59 E-value=0.00012 Score=64.13 Aligned_cols=47 Identities=28% Similarity=0.438 Sum_probs=42.3
Q ss_pred hhcccCCCCEEEEECCeecC-CCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLV-GVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~-~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||.++. ++++.+++.+|+.++..|+|+|.|...
T Consensus 64 ~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 64 RDGRLKETDQILAINGQALDQTITHQQAISILQKAKDTVQLVIARGSL 111 (117)
T ss_dssp HHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHHCCSEEEEEEESSCC
T ss_pred HCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHcCCCEEEEEEEeCCc
Confidence 34459999999999999998 999999999999999999999998643
No 426
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=97.58 E-value=6.4e-05 Score=62.61 Aligned_cols=47 Identities=19% Similarity=0.447 Sum_probs=41.1
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCC--CceEEEEeec
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTS--GLVRFLIGRE 95 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~--~~v~l~v~R~ 95 (612)
+-..|+|++||+|++|||.++.++++.+++.+|+.+. +.|+|+|.|.
T Consensus 40 A~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 40 ADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred HHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 3445569999999999999999999999999999875 4899999885
No 427
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=97.58 E-value=0.00012 Score=61.35 Aligned_cols=45 Identities=29% Similarity=0.455 Sum_probs=41.0
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
..|.|++||+|++|||+++.++++.+++.+++.+++.|+|+|.|.
T Consensus 48 ~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 92 (94)
T 2fe5_A 48 KDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTSDMVYLKVAKP 92 (94)
T ss_dssp HHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCCSEEEEEEECC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEcC
Confidence 345699999999999999999999999999999888999999875
No 428
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=97.58 E-value=0.00011 Score=65.69 Aligned_cols=47 Identities=19% Similarity=0.284 Sum_probs=42.2
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
...|.|++||+|++|||.++.++++++++.+|+.+++.|+|+|.|..
T Consensus 79 ~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 125 (128)
T 1nf3_C 79 QSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANSRNLIITVRPAN 125 (128)
T ss_dssp HHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTTTSEEEEEECCC
T ss_pred HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 34456999999999999999999999999999999999999998753
No 429
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=97.58 E-value=0.00018 Score=60.87 Aligned_cols=49 Identities=35% Similarity=0.413 Sum_probs=43.2
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+...|+|++||+|++|||.++.++++.+++.+++.++..|.|+|.|...
T Consensus 43 A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 91 (98)
T 2opg_A 43 ACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTPQRVRLTLYRDEA 91 (98)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEECSS
T ss_pred HHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcCCC
Confidence 3344569999999999999999999999999999988999999998654
No 430
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=97.57 E-value=0.00015 Score=61.94 Aligned_cols=49 Identities=27% Similarity=0.373 Sum_probs=43.2
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+-..|.|++||+|++|||.++.++++.++..+|+..++.++|+|.|...
T Consensus 52 A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 52 AGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVFMVQSIIS 100 (103)
T ss_dssp HHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCC
Confidence 3445559999999999999999999999999999988899999998643
No 431
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.56 E-value=9e-05 Score=64.03 Aligned_cols=47 Identities=30% Similarity=0.504 Sum_probs=42.8
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||.++.++++.+++.+++.++..|+|+|.|...
T Consensus 57 ~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 57 SDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTGQVVHLLLEKGQS 103 (108)
T ss_dssp HHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHTTSEEEEEEECCCC
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 34569999999999999999999999999999999999999998654
No 432
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.56 E-value=0.0001 Score=65.54 Aligned_cols=47 Identities=17% Similarity=0.482 Sum_probs=42.6
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++.++++.+++.+++.++..|.|+|.|...
T Consensus 66 ~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 112 (124)
T 2daz_A 66 ADGRMRIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRNED 112 (124)
T ss_dssp HHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSCSEEEEEEEECTT
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 34569999999999999999999999999999998999999998643
No 433
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=97.56 E-value=6.6e-05 Score=66.93 Aligned_cols=52 Identities=27% Similarity=0.535 Sum_probs=43.1
Q ss_pred EEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.+.+ ..+|||++.+ +. +.|++|..|.||++|++.| |++|| |||..+.++++
T Consensus 33 ~~~~~-~~~lG~~l~~---~~-----~~gv~V~~V~~gspA~~aG-L~~GD~Il~Vng~~v~~~~~ 88 (124)
T 3tsv_A 33 VKFRK-GDSVGLRLAG---GN-----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNIIR 88 (124)
T ss_dssp EEEEC-SSCCCEEEEE---CT-----TSCEEEEEECTTCHHHHTT-CCTTEEEEEETTEECSSCCH
T ss_pred EEcCC-CCceeEEEec---CC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 33444 4689999998 33 3589999999999999999 99999 89999988754
No 434
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.55 E-value=0.00015 Score=64.28 Aligned_cols=48 Identities=13% Similarity=0.230 Sum_probs=42.3
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRN--TSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~--~~~~v~l~v~R~~~ 97 (612)
...|.|++||+|++|||+.+.++++++++.+|+. .+..|+|+|.|...
T Consensus 58 ~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 58 AQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp HHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred HHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 3445699999999999999999999999999998 46899999999754
No 435
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=97.55 E-value=0.00012 Score=59.89 Aligned_cols=42 Identities=21% Similarity=0.410 Sum_probs=39.5
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+|++||+|++|||..+.+++|++++.+|+..+..++|+|.|.
T Consensus 40 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 81 (83)
T 2kv8_A 40 GLRAGDQILAVNEINVKKASHEDVVKLIGKCSGVLHMVIAEG 81 (83)
T ss_dssp TCCTTCEEEEETTEECSSCCHHHHHHHHTTCSSCEEEEEECC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEcC
Confidence 599999999999999999999999999998888899999885
No 436
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.55 E-value=0.00015 Score=61.84 Aligned_cols=45 Identities=18% Similarity=0.236 Sum_probs=41.3
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDP 98 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~~ 98 (612)
+|++||+|++|||+.+.++++.+++.+|+..++.|.|+|.|...+
T Consensus 53 GL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~~ 97 (100)
T 1whd_A 53 GLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRVSGP 97 (100)
T ss_dssp TCCSSCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEEECCSS
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCCC
Confidence 599999999999999999999999999999888899999987543
No 437
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=97.54 E-value=0.00014 Score=60.84 Aligned_cols=44 Identities=16% Similarity=0.163 Sum_probs=40.5
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|+.||+|++|||..+.++++.++..+|+..++.+.|+|.|..+
T Consensus 41 Gl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 84 (91)
T 2f5y_A 41 GLQQLDTVLQLNERPVEHWKCVELAHEIRSCPSEIILLVWRMVP 84 (91)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEECC-
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCC
Confidence 49999999999999999999999999999988899999998754
No 438
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.54 E-value=5.2e-05 Score=80.97 Aligned_cols=53 Identities=28% Similarity=0.562 Sum_probs=45.3
Q ss_pred EEEEEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeec
Q psy12938 313 LLGVELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGM 375 (612)
Q Consensus 313 ~~~v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~ 375 (612)
+..|.+.|+. ||||+|.| |. +.||||..|.+||+|++.| |++|| |||.++.++
T Consensus 10 ~~~v~~~k~~-~lG~~i~g---g~-----~~gi~V~~V~~gspA~~aG-L~~GD~Il~VnG~~v~~~ 66 (391)
T 3tsz_A 10 MKLVKFRKGD-SVGLRLAG---GN-----DVGIFVAGVLEDSPAAKEG-LEEGDQILRVNNVDFTNI 66 (391)
T ss_dssp EEEEEEECCS-SCCEEEEE---ET-----TTEEEEEEECTTCHHHHTT-CCTTEEEEEETTEECTTC
T ss_pred cEEEEeecCC-ceeEEEEe---cC-----CCCEEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCC
Confidence 4457777876 79999999 43 3589999999999999999 99999 899999764
No 439
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.54 E-value=0.00017 Score=61.82 Aligned_cols=47 Identities=23% Similarity=0.369 Sum_probs=42.0
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|.|++||+|++|||+.+.++++.+++.+++.++..|.|+|.|...
T Consensus 53 ~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 53 RCGRLEVGDLVLHINGESTQGLTHAQAVERIRAGGPQLHLVIRRPLS 99 (104)
T ss_dssp HHCSCCTTCBEEEETTEECTTCCHHHHHHHHHHTCSEEEEEECCCCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 34459999999999999999999999999999988999999988644
No 440
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.54 E-value=8.3e-05 Score=65.33 Aligned_cols=45 Identities=24% Similarity=0.477 Sum_probs=42.2
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++|++||+|++|||+++.++++.+++.+|+.++..|.|+|.|...
T Consensus 61 ~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 61 GLLQENDRVVMVNGTPMEDVLHSFAVQQLRKSGKIAAIVVKRPRK 105 (117)
T ss_dssp HHBCTTCEEEEESSCBCBTCCHHHHHHHHHHSCSEEEEEEEEEEE
T ss_pred ccCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEECCc
Confidence 579999999999999999999999999999999999999998654
No 441
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.54 E-value=6.3e-05 Score=65.79 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=47.9
Q ss_pred eEEEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 312 TLLGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 312 ~~~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+.+++.|.+.. .+|||+|.+ +. +..|++|..|.+||+|++.| |++|| |||.++.++++
T Consensus 13 dp~~~~l~~~~~~~~G~~l~~---~~----~~~g~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 75 (114)
T 2edz_A 13 NPRECKLSKQEGQNYGFFLRI---EK----DTDGHLIRVIEEGSPAEKAG-LLDGDRVLRINGVFVDKEEH 75 (114)
T ss_dssp CCEEEEEECCTTCCCSCEEEC---CT----TCCSCEEECCCTTCTTGGGT-CCTTCEEEEESSSBCSSSCH
T ss_pred CCEEEEEeCCCCCcccEEEEE---ec----CCCCeEEEEeCCCChHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 44668888874 789999987 32 23589999999999999999 99999 89999988654
No 442
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.54 E-value=0.00017 Score=63.04 Aligned_cols=47 Identities=34% Similarity=0.451 Sum_probs=42.4
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+.+.++++.+++.+|+..+..|.|+|.|...
T Consensus 58 ~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 104 (116)
T 2dm8_A 58 RDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTPQKVRLVVYRDEA 104 (116)
T ss_dssp HHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCCSEEEEEEECCSS
T ss_pred hCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCc
Confidence 34569999999999999999999999999999988999999998654
No 443
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=97.53 E-value=0.00017 Score=60.97 Aligned_cols=45 Identities=18% Similarity=0.316 Sum_probs=41.3
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
..|.|++||+|++|||+.+.++++.+++.+|+..+..++|+|.|.
T Consensus 52 ~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 96 (98)
T 1ihj_A 52 LCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKEADFKIELEIQTF 96 (98)
T ss_dssp HHCSCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEEEC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCeEEEEEEeC
Confidence 344599999999999999999999999999999889999999985
No 444
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.53 E-value=9.1e-05 Score=63.73 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=39.9
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+|++||+|++|||.++.+++|.+++.+|+.++..|+|+|.|.
T Consensus 43 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~ 84 (106)
T 3ngh_A 43 GLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLLVLDG 84 (106)
T ss_dssp TCCTTCEEEEETTEECTTSCHHHHHHHHHHTTTEEEEEEECH
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEEC
Confidence 599999999999999999999999999999999999999875
No 445
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.52 E-value=0.00013 Score=65.77 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=41.2
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||+++.++++.+++.+|+.++..|.|+|.|...
T Consensus 82 GL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 82 GLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR 125 (132)
T ss_dssp TCCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEEEEEEECCCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 49999999999999999999999999999999999999998654
No 446
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.51 E-value=0.00015 Score=60.76 Aligned_cols=46 Identities=33% Similarity=0.367 Sum_probs=41.2
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+-..|+|++||+|++|||+++ +.+++++..+|+..++.|+|+|.|.
T Consensus 42 A~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~l~v~~~ 87 (91)
T 2e7k_A 42 VAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVILKILSG 87 (91)
T ss_dssp HHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBCEEEECC
T ss_pred HHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 334467999999999999999 9999999999999889999999874
No 447
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.51 E-value=0.00014 Score=62.12 Aligned_cols=47 Identities=30% Similarity=0.465 Sum_probs=42.1
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|.|++||+|++|||+++.++++.+++.+++..+..|.|+|.|...
T Consensus 51 ~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 51 RNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRRVRLLLKRGTG 97 (103)
T ss_dssp HHCSSCTTCEEEEETTEECSSCCHHHHHHHHHHHCSEECEEEECTTC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 34559999999999999999999999999999888999999998644
No 448
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.51 E-value=0.00016 Score=62.68 Aligned_cols=48 Identities=29% Similarity=0.518 Sum_probs=42.8
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+...|+|++||+|++|||+++.++++.+++.+++..+..|+|+|.|..
T Consensus 49 A~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 96 (110)
T 1um1_A 49 AAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHGGKKMRFLVAKSD 96 (110)
T ss_dssp HHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTCCSEEEEEEECCC
T ss_pred HHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 334556999999999999999999999999999999999999999853
No 449
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=97.51 E-value=0.00018 Score=62.70 Aligned_cols=45 Identities=20% Similarity=0.454 Sum_probs=41.0
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
..|+|++||+|++|||.++.++++.+++.+++.++..|.|+|.|.
T Consensus 64 ~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~ 108 (112)
T 2r4h_A 64 RSGKMRIGDEILEINGETTKNMKHSRAIELIKNGGRRVRLFLKRG 108 (112)
T ss_dssp HTTCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeC
Confidence 344599999999999999999999999999999889999999875
No 450
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.50 E-value=0.00013 Score=64.32 Aligned_cols=47 Identities=23% Similarity=0.379 Sum_probs=42.5
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+++.++++.+++.+++.++..|+|+|.|...
T Consensus 62 ~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 62 LDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNAGYAVSLRVQHRLQ 108 (120)
T ss_dssp HSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHHCSEEEEEEEEEEE
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 34569999999999999999999999999999888899999998654
No 451
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.50 E-value=0.00011 Score=63.82 Aligned_cols=46 Identities=37% Similarity=0.609 Sum_probs=41.8
Q ss_pred hcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 52 RQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 52 ~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
.|+|++||+|++|||+.+.++++.+++.+|+.++..|.|+|.|...
T Consensus 54 aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 54 DGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNSVRMLVARDPA 99 (111)
T ss_dssp HTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSEEEEEEEESCT
T ss_pred cCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeCCC
Confidence 4569999999999999999999999999999888999999998644
No 452
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.49 E-value=0.00011 Score=63.24 Aligned_cols=44 Identities=14% Similarity=0.316 Sum_probs=39.6
Q ss_pred hhc-ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCC----ceEEEEee
Q psy12938 51 IRQ-SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSG----LVRFLIGR 94 (612)
Q Consensus 51 ~~G-~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~----~v~l~v~R 94 (612)
..| +|++||+|++|||.++.++++.+++.+|+.+.. .|+|+|.|
T Consensus 58 ~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r 106 (107)
T 3nfk_A 58 LCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRP 106 (107)
T ss_dssp HSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEEC
T ss_pred HcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEc
Confidence 345 499999999999999999999999999998865 99999987
No 453
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.48 E-value=6.1e-05 Score=66.99 Aligned_cols=59 Identities=29% Similarity=0.504 Sum_probs=46.3
Q ss_pred EEEEEEeeCC--CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeec
Q psy12938 313 LLGVELMKGA--EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGM 375 (612)
Q Consensus 313 ~~~v~l~k~~--~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~ 375 (612)
...+.+.+.. .+|||++.+ ..+.. ...|++|..|.++++|++.|+|++|| |||..+...
T Consensus 20 ~~~~~~~~~~~~~~lG~~~~~---~~~~~-~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~ 84 (124)
T 1wh1_A 20 LEEVDLYRMNSQDKLGLTVCY---RTDDE-DDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNR 84 (124)
T ss_dssp ECCBCCCCSSTTCCCCEEEEC---CCCCS-SCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSH
T ss_pred EEEEEEEecCCCCcccEEEEe---cCCCC-CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCH
Confidence 3346676665 489999998 33221 24699999999999999999999999 899998763
No 454
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=97.48 E-value=0.00017 Score=60.67 Aligned_cols=43 Identities=33% Similarity=0.482 Sum_probs=40.6
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||+++.++++.+++.+++.++..+.|+|.|..
T Consensus 51 gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 51 LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 93 (95)
T ss_dssp TCCTTCEEEEETTEECTTCBHHHHHHHHHHCCSEEEEEEEEEC
T ss_pred CCCCCCEEEEECCEEcCCCCHHHHHHHhhcCCCeEEEEEEeCC
Confidence 6999999999999999999999999999999999999999864
No 455
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.48 E-value=0.00018 Score=61.46 Aligned_cols=43 Identities=33% Similarity=0.482 Sum_probs=40.6
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||.++.++++.+++.+++.++..++|+|.|..
T Consensus 59 gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 59 LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELIIVREV 101 (103)
T ss_dssp SCCTTCEEEEETTEECSSCCHHHHHHHHHHCCSEEEEEEECCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHhhcCCCeEEEEEEecC
Confidence 6999999999999999999999999999999999999999863
No 456
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.47 E-value=5.2e-05 Score=65.95 Aligned_cols=48 Identities=25% Similarity=0.340 Sum_probs=43.2
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
...|+|++||+|++|||+++.++++.+++.+|+.++..|+|+|.|...
T Consensus 58 ~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 58 GRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSSCSSEEEECCCCCCC
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCC
Confidence 344569999999999999999999999999999999999999998654
No 457
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=97.47 E-value=0.00015 Score=62.54 Aligned_cols=48 Identities=31% Similarity=0.464 Sum_probs=42.5
Q ss_pred hhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 50 LIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 50 i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
-..|+|++||+|++|||.++.++++.+++.+|+..+..|.|+|.|...
T Consensus 58 ~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 58 ALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRNAGNPVRLLLIRRLP 105 (108)
T ss_dssp HHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHHHCSEEEEEEEECCC
T ss_pred HHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 334569999999999999999999999999999888899999988643
No 458
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.47 E-value=7.3e-05 Score=62.23 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=52.7
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCCch---hchhhhCCCCCCcEEEEEECCEEeeEEEeccccccC
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGCVG---DHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEELGE 577 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~~~---d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~g~ 577 (612)
.|+.|+.+||+.|+.+...|+++ .+.|..++.+..+ .++.+.++...+|++ |.||+.++.+-.+....-+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i~g~~~i~~~~~~ 79 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHVGGCDDLYALEDE 79 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEEESHHHHHHHHTT
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEEcCHHHHHHHHHc
Confidence 46779999999999999998875 4566666665432 133446788999975 6699866533222111111
Q ss_pred CCCHHHHHHHHHHCCcc
Q psy12938 578 GYFVEDVEAFLVEAGLL 594 (612)
Q Consensus 578 ~~~~~~lE~~L~~~g~l 594 (612)
..|+.+|. .|+|
T Consensus 80 ----~~l~~~l~-~g~~ 91 (92)
T 2khp_A 80 ----GKLDSLLK-TGKL 91 (92)
T ss_dssp ----TCHHHHHH-HSSC
T ss_pred ----CCHHHHHh-ccCc
Confidence 23666666 5654
No 459
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=97.46 E-value=0.00019 Score=69.85 Aligned_cols=92 Identities=21% Similarity=0.243 Sum_probs=63.2
Q ss_pred CC-CeEEEECCeecCCCCHHHHHHHH-hcCCCeEEEEEeecCCCC---------c---h---------------------
Q psy12938 1 VN-DQIIEVDGKSLVGVTQEYAASVL-RNTSGLVRFLIGREKDPV---------N---S--------------------- 45 (612)
Q Consensus 1 ~g-D~Il~VNg~~l~~~th~~av~~L-k~~~~~v~l~v~r~~~~~---------~---~--------------------- 45 (612)
+| |.|++|||..+.+.++... .++ ...+..+.|+|.|..... . .
T Consensus 36 ~G~D~I~~ing~~v~~~~~~~~-~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~~~lGi~~~~~~~~~~~~~Gv 114 (209)
T 3rle_A 36 PFFDFIVSINGSRLNKDNDTLK-DLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGLLGVSIRFCSFDGANENVW 114 (209)
T ss_dssp TTTEEEEEETTEECCSSSSHHH-HHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSSSSSCEEEEEEECTTGGGSCE
T ss_pred cCCeEEEEECCEECcCHHHHHH-HHHhcCCCCEEEEEEEecCCceEEEEEEcccccccccCccceEEeecChhHccccce
Confidence 46 9999999999998776443 333 345789999998752110 0 0
Q ss_pred hhHHhhhc------ccCC-CCEEEEECCeecCCCCHHHHHHHHHhC-CCceEEEEeecC
Q psy12938 46 EVAQLIRQ------SLQV-NDQIIEVDGKSLVGVTQEYAASVLRNT-SGLVRFLIGREK 96 (612)
Q Consensus 46 ~i~~i~~G------~L~~-GD~il~VNg~~l~~~s~~~a~~~l~~~-~~~v~l~v~R~~ 96 (612)
.|..+..| +|+. ||.|++|||. +. +.++...+|+.. +..|.|+|.|..
T Consensus 115 ~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~--~~~~l~~~l~~~~g~~v~l~v~r~~ 170 (209)
T 3rle_A 115 HVLEVESNSPAALAGLRPHSDYIIGADTV-MN--ESEDLFSLIETHEAKPLKLYVYNTD 170 (209)
T ss_dssp EEEEECTTSHHHHHTCCTTTEEEEEESSC-CC--SSSCHHHHHHHTTTSCEEEEEEETT
T ss_pred EEEEeCCCChHHHCCCCCCCCEEEECCCE-eC--CHHHHHHHHHhCCCCeEEEEEEECC
Confidence 01122222 6999 9999999997 54 556677777764 678999998853
No 460
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=97.46 E-value=0.00017 Score=59.27 Aligned_cols=42 Identities=17% Similarity=0.250 Sum_probs=39.6
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+|++||+|++|||..+.++++.+++.+++..+..+.|+|.|.
T Consensus 42 Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~R~ 83 (85)
T 1rgw_A 42 QLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLTLQKS 83 (85)
T ss_dssp SCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEEEESC
T ss_pred CCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEEEEeC
Confidence 699999999999999999999999999998888899999875
No 461
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.46 E-value=0.00028 Score=64.73 Aligned_cols=89 Identities=15% Similarity=0.143 Sum_probs=64.3
Q ss_pred CceEEEEEeC-CCChhhhhhHHHHHHHHhhcC--CceEEEecCCCch--------------------hchhhhCCCCC--
Q psy12938 498 HITVIAHLSS-PSLPACRALNSSLAELSRSHT--NVKFVSVPLGCVG--------------------DHFSATFKTSG-- 552 (612)
Q Consensus 498 ~~~Vvvhfy~-~~~~~C~~m~~~l~~LA~~~~--~vkF~ki~~~~~~--------------------d~~~~~~~i~~-- 552 (612)
+.+||+.||+ .||+.|....+.|.++.++|. +++|+-|..+... ..+...|.+..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 3489999998 999999999999999999884 5888888765210 13446677766
Q ss_pred ----------CcEEEEE-ECCEEeeEEEeccccccCCCCHHHHHHHHHH
Q psy12938 553 ----------LPAMLAY-RGGEVVGNFVRLGEELGEGYFVEDVEAFLVE 590 (612)
Q Consensus 553 ----------lPtllvy-k~G~~~~~~vg~~~~~g~~~~~~~lE~~L~~ 590 (612)
.|+++++ ++|+++..+.+... .-..+++.+.|.+
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~----~~~~~~il~~l~~ 159 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV----AGHADAVLAALKA 159 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSCCS----TTHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCCCc----ccCHHHHHHHHHH
Confidence 8998888 79999997743321 2234555555543
No 462
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.46 E-value=7.2e-05 Score=65.89 Aligned_cols=44 Identities=16% Similarity=0.381 Sum_probs=40.0
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCC----CceEEEEeecC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTS----GLVRFLIGREK 96 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~----~~v~l~v~R~~ 96 (612)
|+|++||+|++|||+++.+++|.+++.+++.++ ..|.|+|.|..
T Consensus 59 gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 59 PRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp SCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred cCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 579999999999999999999999999999875 48999998864
No 463
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=97.45 E-value=0.0002 Score=61.60 Aligned_cols=44 Identities=18% Similarity=0.331 Sum_probs=41.2
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.++++.+++.+|+.++..+.|+|.|...
T Consensus 60 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 60 GVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSVES 103 (107)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHCSSEEEEEEECSSC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEcCCC
Confidence 49999999999999999999999999999999999999998654
No 464
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=97.45 E-value=0.00018 Score=59.71 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=40.1
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||+.+.++++.++..+++..+..+.|+|.|..
T Consensus 44 Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 86 (89)
T 2q3g_A 44 GVAVGDWVLSIDGENAGSLTHIEAQNKIRACGERLSLGLSRAI 86 (89)
T ss_dssp TCCTTCEEEEETTEEGGGCCHHHHHHHHHTCTTEEEEEEEEEC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEeCC
Confidence 4999999999999999999999999999988889999998864
No 465
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=97.45 E-value=0.00026 Score=57.25 Aligned_cols=45 Identities=13% Similarity=0.376 Sum_probs=40.0
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
..|.|++||+|++|||..+.++++.++..+|+...+.+.|+|.|.
T Consensus 36 ~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~ 80 (81)
T 2rcz_A 36 RDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRD 80 (81)
T ss_dssp HHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC-
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeC
Confidence 345599999999999999999999999999998888999999874
No 466
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=97.45 E-value=0.00022 Score=58.93 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=40.4
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||..+.+++++++..+|+.....+.|+|.|..
T Consensus 43 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~ 85 (87)
T 2pa1_A 43 DLRPGDIIVAINGESAEGMLHAEAQSKIRQSPSPLRLQLDRIT 85 (87)
T ss_dssp TCCTTCEEEEETTEESTTCCHHHHHHHHHTCCSSEEEEEEECC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEecC
Confidence 6999999999999999999999999999998899999999853
No 467
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.44 E-value=0.00021 Score=61.06 Aligned_cols=47 Identities=28% Similarity=0.364 Sum_probs=42.3
Q ss_pred HhhhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 49 QLIRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 49 ~i~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+-..|+|++||+|++|||.++.+.++.+++.+++.++..++|+|.|.
T Consensus 48 A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~ 94 (104)
T 3i4w_A 48 ADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYK 94 (104)
T ss_dssp HHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEC
T ss_pred HHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEEC
Confidence 33445699999999999999999999999999999999999999885
No 468
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=97.44 E-value=0.00018 Score=60.12 Aligned_cols=43 Identities=26% Similarity=0.369 Sum_probs=39.2
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||+++.+++++++..+|+..+..++|+|.|..
T Consensus 44 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 86 (91)
T 2vsp_A 44 GLEDEDVIIEVNGVNVLDEPYEKVVDRIQSSGKNVTLLVCGKK 86 (91)
T ss_dssp TCCTTCEEEEETTEECTTSCHHHHHHHHTTSCSEEEEEEEC--
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeCC
Confidence 5999999999999999999999999999988889999999854
No 469
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=97.44 E-value=0.00019 Score=60.31 Aligned_cols=44 Identities=20% Similarity=0.359 Sum_probs=40.5
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||.++.+++|++++.+|+.+++.+.+++.|...
T Consensus 46 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~ 89 (95)
T 3r68_A 46 GLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEL 89 (95)
T ss_dssp TCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC-
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCcc
Confidence 49999999999999999999999999999999999999988643
No 470
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.44 E-value=0.00026 Score=59.49 Aligned_cols=46 Identities=39% Similarity=0.512 Sum_probs=41.4
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
..|.|++||+|++|||..+.++++.+++.+++..+..|.|+|.|..
T Consensus 48 ~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~g 93 (97)
T 2iwn_A 48 HDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVLLTLMRRG 93 (97)
T ss_dssp HHCCCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEEEEEEEEEE
T ss_pred hCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCC
Confidence 3456999999999999999999999999999998899999998853
No 471
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.43 E-value=0.00023 Score=59.27 Aligned_cols=42 Identities=12% Similarity=0.248 Sum_probs=39.4
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+|++||+|++|||+.+.++++.+++.+++..+..+.|+|.|.
T Consensus 49 Gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 49 GLKPYDRLLQVNHVRTRDFDCCLVVPLIAESGNKLDLVISRN 90 (91)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEEC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEeC
Confidence 499999999999999999999999999998889999999884
No 472
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.43 E-value=0.00011 Score=61.66 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=40.1
Q ss_pred EEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
+...+...+|||++.+ | +|.+|.+||+|++.| |++|| |||.++.++++
T Consensus 17 i~~~~~~~~lG~~~~~------------G-~V~~V~~~spA~~aG-L~~GD~Il~Ing~~v~~~~~ 68 (90)
T 1y7n_A 17 IRRPDLRYQLGFSVQN------------G-IICSLMRGGIAERGG-VRVGHRIIEINGQSVVATPH 68 (90)
T ss_dssp EEESSTTSCCCEEEET------------T-EEEEECTTSHHHHHT-CCSSCEEEEETTEECTTSCH
T ss_pred EEeCCCccccCeEecC------------C-EEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 4444445789999966 2 999999999999999 99999 89999987665
No 473
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=97.43 E-value=0.00023 Score=58.93 Aligned_cols=42 Identities=21% Similarity=0.471 Sum_probs=39.5
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeec
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGRE 95 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~ 95 (612)
+|++||+|++|||..+.++++.++..+++..+..+.|+|.|.
T Consensus 44 Gl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~ 85 (88)
T 2uzc_A 44 NVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRE 85 (88)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEECC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEeC
Confidence 499999999999999999999999999998888999999885
No 474
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=97.43 E-value=0.00033 Score=60.70 Aligned_cols=47 Identities=38% Similarity=0.593 Sum_probs=41.6
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhC--CCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNT--SGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~--~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+.+.++++++++.+|+.. +..|.|+|.|...
T Consensus 54 ~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 54 QDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEE 102 (111)
T ss_dssp HHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCC
T ss_pred HCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 3456999999999999999999999999999985 6889999998654
No 475
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.42 E-value=0.00026 Score=60.76 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=40.4
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKDP 98 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~~ 98 (612)
+|++||+|++|||+.+.++++++++.+|+. +..+.|+|.|...+
T Consensus 58 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 58 GLQEGDQVLAVNDVDFQDIEHSKAVEILKT-AREISMRVRFFSGP 101 (104)
T ss_dssp TCCTTCEEEEETTEECSSCCHHHHHHHHHH-SSSEEEEEECCCCS
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCEEEEEEEECCCC
Confidence 599999999999999999999999999998 78999999986553
No 476
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.42 E-value=0.00025 Score=67.37 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=35.7
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCC-ceEEEecC
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTN-VKFVSVPL 537 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~-vkF~ki~~ 537 (612)
....+|+.||+.||+.|+.+.+.|..|+++|+. ++|..++.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 345799999999999999999999999999984 88876654
No 477
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.40 E-value=0.00013 Score=73.55 Aligned_cols=45 Identities=29% Similarity=0.406 Sum_probs=42.4
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
|+|++||+|++|||+++.+++|.+++.+|+.++..|+|+|.|...
T Consensus 120 aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 120 EALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKE 164 (263)
T ss_dssp TTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCEEEECCSS
T ss_pred CCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEEEEEeCcc
Confidence 589999999999999999999999999999999999999998654
No 478
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.40 E-value=0.00021 Score=63.78 Aligned_cols=47 Identities=34% Similarity=0.528 Sum_probs=42.6
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||.++.++++++++.+|+..+..|.|+|.|...
T Consensus 61 ~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 61 HNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRNAGQVVHLTLVRRKT 107 (129)
T ss_dssp HHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHHCCSSEEEEEEEESS
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 44569999999999999999999999999999988999999998644
No 479
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=97.40 E-value=0.00024 Score=61.49 Aligned_cols=44 Identities=20% Similarity=0.340 Sum_probs=40.9
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.+++|.+++.+|+..+..+.|+|.|..+
T Consensus 62 Gl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~~~~~ 105 (109)
T 1q3o_A 62 GLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTR 105 (109)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEEEEEECCC
Confidence 49999999999999999999999999999888899999998754
No 480
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.40 E-value=0.00023 Score=62.15 Aligned_cols=45 Identities=20% Similarity=0.409 Sum_probs=41.8
Q ss_pred cccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 53 QSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 53 G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
++|++||+|++|||+.+.++++++++.+|+..+..|.|+|.|...
T Consensus 60 agL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 60 AKLKVGDRILAVNGQSIINMPHADIVKLIKDAGLSVTLRIIPQEE 104 (114)
T ss_dssp SSCCTTCBEEEETTBCTTTSCHHHHHHHHHHTTTEEEEEECCCSC
T ss_pred CCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 579999999999999999999999999999988999999998654
No 481
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=97.40 E-value=0.00014 Score=60.56 Aligned_cols=52 Identities=40% Similarity=0.519 Sum_probs=43.2
Q ss_pred EEEEEeeCC--CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGA--EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~--~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
++|.+.+.. ..|||.+.. |++|.+|.+||+|++.|+|++|| |||.++.++++
T Consensus 4 ~~v~~~~~~~~~~~g~~~~~------------gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~ 61 (92)
T 3cyy_A 4 TKVTLVKSAKNEEYGLRLAS------------HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSL 61 (92)
T ss_dssp EEEEEECSSTTSCCCEEEEE------------EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCH
T ss_pred EEEEEEeCCCCCCCCEEEeC------------CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCH
Confidence 446666544 579998864 69999999999999999999999 89999987655
No 482
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=97.39 E-value=0.00019 Score=59.61 Aligned_cols=53 Identities=15% Similarity=0.168 Sum_probs=43.0
Q ss_pred EEEEEeeCC---CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeecc
Q psy12938 314 LGVELMKGA---EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMG 376 (612)
Q Consensus 314 ~~v~l~k~~---~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~ 376 (612)
+.+.+.+.+ .+|||++.. ...|++|..|.+|++|++.| |++|| |||..+.+.+
T Consensus 5 ~~~~~~~~~~~~~~lG~~~~~---------~~~g~~V~~V~~~spA~~aG-l~~GD~I~~ing~~v~~~~ 64 (90)
T 2eaq_A 5 MRISINQTPGKSLDFGFTIKW---------DIPGIFVASVEAGSPAEFSQ-LQVDDEIIAINNTKFSYND 64 (90)
T ss_dssp EEEEEECCTTCSSCCSEEEEE---------ETTEEEEEEECTTSHHHHTT-CCTTCEEEEETTEECCTTC
T ss_pred eEEEEEecCCCCCcccEEEEe---------cCCCEEEEEECCCChHHHcC-CCCCCEEEEECCEEccCCC
Confidence 456666655 369999986 34589999999999999999 99999 8999985533
No 483
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.39 E-value=0.00022 Score=59.82 Aligned_cols=41 Identities=27% Similarity=0.460 Sum_probs=38.6
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEee
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGR 94 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R 94 (612)
+|++||+|++|||.++.++++.++..+|+.++..|+|+|.+
T Consensus 48 GL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~g~~v~l~v~p 88 (90)
T 1y7n_A 48 GVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHMKTMP 88 (90)
T ss_dssp TCCSSCEEEEETTEECTTSCHHHHHHHHHHCCEEEEEEEEC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEE
Confidence 59999999999999999999999999999988999999874
No 484
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.39 E-value=7.7e-05 Score=61.78 Aligned_cols=58 Identities=19% Similarity=0.329 Sum_probs=45.6
Q ss_pred EEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC--CchhchhhhC-CCCCCcEEEEEECCEEee
Q psy12938 501 VIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG--CVGDHFSATF-KTSGLPAMLAYRGGEVVG 566 (612)
Q Consensus 501 Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~--~~~d~~~~~~-~i~~lPtllvyk~G~~~~ 566 (612)
.|+.|+++||+.|+.+.+.|+++. +.|..++.+ ... ++.+.+ ++..+|+++ .||+.++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~-----i~~~~vdv~~~~~~-~l~~~~~~~~~vP~l~--~~g~~i~ 67 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG-----VKYTDIDASTSLRQ-EMVQRANGRNTFPQIF--IGDYHVG 67 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT-----CCEEEECSCHHHHH-HHHHHHHSSCCSCEEE--ETTEECC
T ss_pred eEEEEECCCChhHHHHHHHHHHcC-----CCcEEEECCHHHHH-HHHHHhCCCCCcCEEE--ECCEEEe
Confidence 467799999999999999999873 567777776 332 566778 999999984 5998765
No 485
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.38 E-value=0.00011 Score=62.90 Aligned_cols=44 Identities=20% Similarity=0.387 Sum_probs=40.5
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.++++++++.+|+..+..|.|+|.|...
T Consensus 47 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 47 GLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKEA 90 (102)
T ss_dssp TCCTTCEEEEESSCBCTTSCHHHHHHHHHHSTTEEEEEECSTTC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 59999999999999999999999999999988999999987543
No 486
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.38 E-value=0.00026 Score=61.83 Aligned_cols=46 Identities=17% Similarity=0.330 Sum_probs=40.8
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
..|.|++||+|++|||+.+.++++++++.+|+...+.|+|+|.|..
T Consensus 63 ~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~v~r~~ 108 (113)
T 1va8_A 63 KSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSS 108 (113)
T ss_dssp HHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEEEECCC
T ss_pred HcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECC
Confidence 3444499999999999999999999999999998899999998754
No 487
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.38 E-value=7.6e-05 Score=62.09 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=50.7
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC---c---hhchhhhCCCCCCcEEEEEECCEEeeEEEeccccc
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC---V---GDHFSATFKTSGLPAMLAYRGGEVVGNFVRLGEEL 575 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~---~---~d~~~~~~~i~~lPtllvyk~G~~~~~~vg~~~~~ 575 (612)
|+-|+.+||+.|+.+...|+++.-.| .++.|+... . ..++.+.++...+|+|++ +|+.++ |
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~gi~~---~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~i~---G----- 80 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREGVDF---EVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKHVL---G----- 80 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHTCCC---EEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEEEE---S-----
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCc---EEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEEEe---C-----
Confidence 55688999999999999999985443 444554211 1 024556788999999987 886543 2
Q ss_pred cCCCCHHHHHHHHH
Q psy12938 576 GEGYFVEDVEAFLV 589 (612)
Q Consensus 576 g~~~~~~~lE~~L~ 589 (612)
|..+.|+.+|.
T Consensus 81 ---~~~~~l~~~l~ 91 (92)
T 3ic4_A 81 ---YNEEKLKELIR 91 (92)
T ss_dssp ---CCHHHHHHHHH
T ss_pred ---CCHHHHHHHhc
Confidence 45688888874
No 488
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.37 E-value=0.00022 Score=60.83 Aligned_cols=46 Identities=15% Similarity=0.509 Sum_probs=41.0
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
..|+|++||+|++|||+.+.++ +.+++.+++..+..|+|+|.|...
T Consensus 50 ~agGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 50 LSQKMRTGDELVNINGTPLYGS-RQEALILIKGSFRILKLIVRRRNS 95 (100)
T ss_dssp HHTSCCTTCEEEEETTEECCSC-SHHHHHHHHTCCSSCEEEEEECCC
T ss_pred HcCCCCCCCEEEEECCEEccch-HHHHHHHHHhCCCeEEEEEEeCCC
Confidence 3457999999999999999987 899999999988999999998654
No 489
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.37 E-value=0.00038 Score=58.48 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=40.9
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.++++.++..+|+.....++|+|.|...
T Consensus 47 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g~ 90 (94)
T 1vb7_A 47 DLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRLQLDRSSG 90 (94)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEEEEECCCC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCc
Confidence 69999999999999999999999999999888999999998644
No 490
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.36 E-value=9.1e-05 Score=71.43 Aligned_cols=44 Identities=14% Similarity=0.205 Sum_probs=39.3
Q ss_pred CCceEEEEEeCCCChhhhhhHHHH---HHHHhhcC-CceEEEecCCCc
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSL---AELSRSHT-NVKFVSVPLGCV 540 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l---~~LA~~~~-~vkF~ki~~~~~ 540 (612)
....+||.||+.||+.|+.+.+.| +.|+++|+ +++|.+++++..
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 345799999999999999999999 99999998 599999998753
No 491
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.36 E-value=0.00031 Score=59.56 Aligned_cols=43 Identities=16% Similarity=0.318 Sum_probs=40.6
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
+|++||+|++|||..+.++++.+++.+|+..+..++|+|.|..
T Consensus 51 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~ 93 (99)
T 3khf_A 51 GLRAGDLITHINGESVLGLVHMDVVELLLKSGNKISLRTTALE 93 (99)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEECSC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEEEEEEECC
Confidence 4999999999999999999999999999999999999999854
No 492
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=97.36 E-value=0.00037 Score=58.03 Aligned_cols=46 Identities=13% Similarity=0.377 Sum_probs=40.3
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecC
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREK 96 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~ 96 (612)
..|+|++||+|++|||..+.++++.++..+|+...+.+.|+|.|..
T Consensus 38 ~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g 83 (92)
T 3cyy_A 38 RDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 83 (92)
T ss_dssp HSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC--
T ss_pred hcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCC
Confidence 3445999999999999999999999999999998889999998854
No 493
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.35 E-value=0.00037 Score=69.22 Aligned_cols=84 Identities=12% Similarity=0.215 Sum_probs=60.0
Q ss_pred CCceEEEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCCC-------------------------------------
Q psy12938 497 RHITVIAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLGC------------------------------------- 539 (612)
Q Consensus 497 ~~~~Vvvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~~------------------------------------- 539 (612)
....+|+.|+++||+.|+.+.+.|..+.++ .+++|..++.--
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~-g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS-GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT-TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC-CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 344789999999999999999999998776 367776433210
Q ss_pred ------c------hhchhhhCCCCCCcEEEEEE-CCEEeeEEEeccccccCCCCHHHHHHHHH
Q psy12938 540 ------V------GDHFSATFKTSGLPAMLAYR-GGEVVGNFVRLGEELGEGYFVEDVEAFLV 589 (612)
Q Consensus 540 ------~------~d~~~~~~~i~~lPtllvyk-~G~~~~~~vg~~~~~g~~~~~~~lE~~L~ 589 (612)
. ...+..+|.+.+.||++++. +|+. ..+.|+.. .++|+.+|.
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~-------~~~L~~~l~ 229 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPD-------QKTLNIIMG 229 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCC-------HHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCC-------HHHHHHHHH
Confidence 0 01235688999999999997 5865 45666533 377777765
No 494
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=97.34 E-value=0.00031 Score=59.27 Aligned_cols=41 Identities=17% Similarity=0.339 Sum_probs=38.7
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEee
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGR 94 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R 94 (612)
+|++||+|++|||..+.+++++++..+|+..++.|+|+|.|
T Consensus 54 GL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~~ 94 (96)
T 2ego_A 54 GLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLY 94 (96)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTEEEEEEEC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEE
Confidence 49999999999999999999999999999988899999975
No 495
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.34 E-value=5.1e-05 Score=65.11 Aligned_cols=54 Identities=24% Similarity=0.303 Sum_probs=44.5
Q ss_pred EEEeeCCCCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 316 VELMKGAEGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 316 v~l~k~~~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
|.+ ++..+|||++.+ +.+. ..+++|..|.++++|++.| |++|| |||..+.++++
T Consensus 9 v~~-~~~~~lG~~l~~---g~~~---~~~~~V~~V~~~spA~~aG-L~~GD~I~~ing~~v~~~~~ 66 (103)
T 1v5l_A 9 VVL-PGPAPWGFRLSG---GIDF---NQPLVITRITPGSKAAAAN-LCPGDVILAIDGFGTESMTH 66 (103)
T ss_dssp CEE-ESSSCCSBCCEE---ETTT---TEEEECSCBCTTSTTGGGT-CCTTCBEEEETTEECSSCCH
T ss_pred EEE-cCCCCcCEEEec---cccC---CCCeEEEEECCCCHHHHcC-CCCCCEEEEECCEECCCCCH
Confidence 544 455689999998 5442 3589999999999999999 99999 89999988554
No 496
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=97.33 E-value=0.00027 Score=59.49 Aligned_cols=44 Identities=20% Similarity=0.377 Sum_probs=40.8
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.+++++++..+|+..+..+.|+|.|...
T Consensus 47 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 90 (96)
T 2v90_A 47 GMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCVSLTVVDPEA 90 (96)
T ss_dssp TCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEECCCT
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEECCCC
Confidence 49999999999999999999999999999988899999998644
No 497
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.33 E-value=5.1e-05 Score=66.01 Aligned_cols=62 Identities=11% Similarity=0.162 Sum_probs=43.6
Q ss_pred EEEEeCCCChhhhhhHHHHHHHHhhcCCceEEEecCC-----CchhchhhhCCCCCCcEEEEEECCEEeeEE
Q psy12938 502 IAHLSSPSLPACRALNSSLAELSRSHTNVKFVSVPLG-----CVGDHFSATFKTSGLPAMLAYRGGEVVGNF 568 (612)
Q Consensus 502 vvhfy~~~~~~C~~m~~~l~~LA~~~~~vkF~ki~~~-----~~~d~~~~~~~i~~lPtllvyk~G~~~~~~ 568 (612)
|+.|+.+||+.|+.+.+.|+++.-.| .++.|+.+ ...+.+...+....+|++ |.||+.++.+
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~i~~---~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g~~igG~ 87 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLGVQP---LVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCGKHIGGC 87 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTCCC---EEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETTEEEESH
T ss_pred EEEEECCCChhHHHHHHHHHHcCCCC---eEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEcCc
Confidence 55599999999999999999875444 44455432 111124444688999998 7799988744
No 498
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.31 E-value=0.0002 Score=64.03 Aligned_cols=45 Identities=22% Similarity=0.227 Sum_probs=40.6
Q ss_pred hhcccCCCCEEEEECCeecCCCCHHHHHHHHHh--CCCceEEEEeec
Q psy12938 51 IRQSLQVNDQIIEVDGKSLVGVTQEYAASVLRN--TSGLVRFLIGRE 95 (612)
Q Consensus 51 ~~G~L~~GD~il~VNg~~l~~~s~~~a~~~l~~--~~~~v~l~v~R~ 95 (612)
..|+|++||+|++|||..+.+.++++++.+|+. .+..|+|+|.|.
T Consensus 64 ~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 64 SDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp GCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred HcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 345699999999999999999999999999997 467899999986
No 499
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.31 E-value=0.00022 Score=63.59 Aligned_cols=57 Identities=30% Similarity=0.486 Sum_probs=45.3
Q ss_pred EEEEEeeCC-CCcceEEEeccCCCCCCCCccceEEEEeccCchhcccCCccccc----CCceeeeeccc
Q psy12938 314 LGVELMKGA-EGLGLSIIGMGVGADAGLEKLGIFVKTITEAGAAARDGRIQGAE----GLGLSIIGMGV 377 (612)
Q Consensus 314 ~~v~l~k~~-~glG~si~g~~~g~~~~~~~~gi~i~~i~~gg~a~~dgrl~~gD----vng~~~~g~~~ 377 (612)
.++.+.... .+|||++.+ +.+. ..|++|..|.+|++|++.| |++|| |||..+.++++
T Consensus 22 ~~v~v~~~~~~~lG~~~~~---~~~~---~~gv~V~~V~~~spA~~aG-L~~GD~I~~vng~~v~~~~~ 83 (128)
T 1uf1_A 22 KKVNLVLGDGRSLGLTIRG---GAEY---GLGIYITGVDPGSEAEGSG-LKVGDQILEVNGRSFLNILH 83 (128)
T ss_dssp EEEEEECCSSCCCCEEEEC---CTTT---TCCCEEEEECTTCHHHHHT-CCTTCEEEEETTEECSSCCH
T ss_pred EEEEEEECCCCccCEEEEC---cccC---CCCEEEEEECCCCHHHHCC-CCCCCEEEEECCEECCCCCH
Confidence 345554443 679999998 4332 3489999999999999999 99999 89999998765
No 500
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=97.30 E-value=0.00039 Score=57.94 Aligned_cols=44 Identities=18% Similarity=0.339 Sum_probs=40.9
Q ss_pred ccCCCCEEEEECCeecCCCCHHHHHHHHHhCCCceEEEEeecCC
Q psy12938 54 SLQVNDQIIEVDGKSLVGVTQEYAASVLRNTSGLVRFLIGREKD 97 (612)
Q Consensus 54 ~L~~GD~il~VNg~~l~~~s~~~a~~~l~~~~~~v~l~v~R~~~ 97 (612)
+|++||+|++|||..+.+.++.++..+|+..+..+.|+|.|...
T Consensus 44 Gl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 44 NLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEH 87 (91)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEEEECC
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 59999999999999999999999999999988999999998643
Done!