BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1295
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XH16|NH2L1_XENLA NHP2-like protein 1 OS=Xenopus laevis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 117/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
EP VNPKAYPLAD LT +L LVQQ+ NYKQLRKGANEATKTLNRG++EFIV+AADAEP
Sbjct: 3 EPEVNPKAYPLADAQLTKTLLDLVQQSANYKQLRKGANEATKTLNRGIAEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLKPQIQ++QQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKPQIQSVQQA 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|Q6P8E9|NH2L1_XENTR NHP2-like protein 1 OS=Xenopus tropicalis GN=nhp2l1 PE=2 SV=1
Length = 128
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/126 (84%), Positives = 117/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
EP VNPKAYPLAD LT +L LVQQA NYKQLRKGANEATKTLNRG++EFIV+AADAEP
Sbjct: 3 EPEVNPKAYPLADAQLTKTLLDLVQQAANYKQLRKGANEATKTLNRGIAEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IAC+VT+ EGSQLKPQIQ++QQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACAVTIKEGSQLKPQIQSLQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|Q9U3Z7|NH2L1_DROME NHP2-like protein 1 homolog OS=Drosophila melanogaster GN=hoip PE=2
SV=1
Length = 127
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 100/123 (81%), Positives = 114/123 (92%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
VNPKA+PLAD LT KI++L+QQALNY QLRKGANEATKTLNRGL++ +VLA DAEP+EI
Sbjct: 5 VNPKAFPLADAQLTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEI 64
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIER 134
+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPI+ACSVT +EGSQLK QI +IQQ+IER
Sbjct: 65 LLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSVTTNEGSQLKSQITSIQQEIER 124
Query: 135 LLI 137
LL+
Sbjct: 125 LLV 127
>sp|P55770|NH2L1_RAT NHP2-like protein 1 OS=Rattus norvegicus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 116/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
E VNPKAYPLAD LT K+L LVQQ+ NYKQLRKGANEATKTLNRG+SEFIV+AADAEP
Sbjct: 3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLK QIQ+IQQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|Q9D0T1|NH2L1_MOUSE NHP2-like protein 1 OS=Mus musculus GN=Nhp2l1 PE=2 SV=4
Length = 128
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 116/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
E VNPKAYPLAD LT K+L LVQQ+ NYKQLRKGANEATKTLNRG+SEFIV+AADAEP
Sbjct: 3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLK QIQ+IQQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|Q4R5C6|NH2L1_MACFA NHP2-like protein 1 OS=Macaca fascicularis GN=NHP2L1 PE=2 SV=1
Length = 128
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 116/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
E VNPKAYPLAD LT K+L LVQQ+ NYKQLRKGANEATKTLNRG+SEFIV+AADAEP
Sbjct: 3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLK QIQ+IQQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|P55769|NH2L1_HUMAN NHP2-like protein 1 OS=Homo sapiens GN=NHP2L1 PE=1 SV=3
Length = 128
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 116/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
E VNPKAYPLAD LT K+L LVQQ+ NYKQLRKGANEATKTLNRG+SEFIV+AADAEP
Sbjct: 3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLK QIQ+IQQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|Q3B8S0|NH2L1_BOVIN NHP2-like protein 1 OS=Bos taurus GN=NHP2L1 PE=2 SV=3
Length = 128
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 116/126 (92%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
E VNPKAYPLAD LT K+L LVQQ+ NYKQLRKGANEATKTLNRG+SEFIV+AADAEP
Sbjct: 3 EADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP+IACSVT+ EGSQLK QIQ+IQQ
Sbjct: 63 LEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQS 122
Query: 132 IERLLI 137
IERLL+
Sbjct: 123 IERLLV 128
>sp|O74690|SNU13_SCHPO 13 kDa ribonucleoprotein-associated protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=snu13 PE=3 SV=1
Length = 125
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 110/124 (88%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
+VNPKA+PLAD+ LT +IL LVQQA +YKQLRKGANEATKTLNRG+SEFIV+AAD EP+E
Sbjct: 2 SVNPKAFPLADSGLTQQILDLVQQASHYKQLRKGANEATKTLNRGISEFIVMAADTEPIE 61
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV SK ALGRACGVSRP+I+ S+T +E S L PQIQAI+ IE
Sbjct: 62 ILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISASITTNEASDLLPQIQAIKLAIE 121
Query: 134 RLLI 137
+LLI
Sbjct: 122 KLLI 125
>sp|Q4P0K3|SNU13_USTMA 13 kDa ribonucleoprotein-associated protein OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=SNU13 PE=3 SV=1
Length = 126
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD LT +IL L+QQA +YKQL+KGANEATKTLNRG+ EFIV+AAD EP+E
Sbjct: 3 APNPKAFPLADATLTNQILDLIQQASHYKQLKKGANEATKTLNRGICEFIVMAADVEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
IVLHLPLLCEDKNVPYVFV SK ALGRACGVSRP+++ SVT +E +L+ QIQ ++ IE
Sbjct: 63 IVLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVVSASVTTNEARELQSQIQTVKLAIE 122
Query: 134 RLLI 137
RLLI
Sbjct: 123 RLLI 126
>sp|Q6C0I0|SNU13_YARLI 13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SNU13 PE=3 SV=1
Length = 126
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/122 (72%), Positives = 108/122 (88%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NPKA+PLAD ALT +IL +VQQA + +QL+KGANEATKTLNRG+SEFI++AADAEP+EI+
Sbjct: 5 NPKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEPIEIL 64
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
LHLPLLCEDKNVPY+FV SK ALGRACGVSRP+I+ SVT ++ SQLK QI ++ +IERL
Sbjct: 65 LHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDKIERL 124
Query: 136 LI 137
LI
Sbjct: 125 LI 126
>sp|Q6BLQ3|SNU13_DEBHA 13 kDa ribonucleoprotein-associated protein OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SNU13 PE=3 SV=1
Length = 126
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 107/124 (86%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD+ALT +IL +VQQ+ N +QL+KGANEATKTLNRG+SEFI++AAD EP+E
Sbjct: 3 APNPKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV SK ALGRACGVSRP+IA SVT +E S +K QI I+ +IE
Sbjct: 63 ILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQIYGIKDKIE 122
Query: 134 RLLI 137
LLI
Sbjct: 123 TLLI 126
>sp|P0CQ52|SNU13_CRYNJ 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=SNU13 PE=3 SV=1
Length = 127
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 105/122 (86%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NPKA+PLA+ LT +IL L+QQA +YKQL+KGANEATKTLNRG+ EFIV+ AD EP+EIV
Sbjct: 6 NPKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIV 65
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
LHLPLLCEDKNVPYVF+ SK ALGRACGVSRP+IA SVT +E +L QIQA++ +IE+L
Sbjct: 66 LHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQIQAVKNEIEKL 125
Query: 136 LI 137
LI
Sbjct: 126 LI 127
>sp|P0CQ53|SNU13_CRYNB 13 kDa ribonucleoprotein-associated protein OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=SNU13 PE=3 SV=1
Length = 127
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 105/122 (86%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NPKA+PLA+ LT +IL L+QQA +YKQL+KGANEATKTLNRG+ EFIV+ AD EP+EIV
Sbjct: 6 NPKAFPLANAQLTNQILDLIQQAQHYKQLKKGANEATKTLNRGICEFIVMTADVEPIEIV 65
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
LHLPLLCEDKNVPYVF+ SK ALGRACGVSRP+IA SVT +E +L QIQA++ +IE+L
Sbjct: 66 LHLPLLCEDKNVPYVFLPSKTALGRACGVSRPVIAASVTTNEARELNAQIQAVKNEIEKL 125
Query: 136 LI 137
LI
Sbjct: 126 LI 127
>sp|Q5ANL6|SNU13_CANAL 13 kDa ribonucleoprotein-associated protein OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SNU13 PE=3 SV=1
Length = 126
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/124 (71%), Positives = 107/124 (86%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD+ALT +IL +VQQ+ N +QL+KGANEATKTLNRG+SEFI++AAD EP+E
Sbjct: 3 APNPKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV SK ALGRACGVSRP+IA SVT ++ S +K QI I+ +IE
Sbjct: 63 ILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASVTSNDASSIKNQIYGIKDKIE 122
Query: 134 RLLI 137
LLI
Sbjct: 123 TLLI 126
>sp|Q757T2|SNU13_ASHGO 13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SNU13 PE=3 SV=1
Length = 127
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/122 (71%), Positives = 106/122 (86%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NPKA+PLAD ALT +IL +VQQA N +QL+KGANEATKTLNRG+SEFI++AAD EP+EI+
Sbjct: 6 NPKAFPLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEIL 65
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
LHLPLLCEDKNVPYVFV S+ ALGRACGVSRP+IA S+T ++ S +K QI A++ +IE L
Sbjct: 66 LHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETL 125
Query: 136 LI 137
LI
Sbjct: 126 LI 127
>sp|P39990|SNU13_YEAST 13 kDa ribonucleoprotein-associated protein OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNU13 PE=1
SV=1
Length = 126
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 107/124 (86%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD ALT +IL +VQQA N +QL+KGANEATKTLNRG+SEFI++AAD EP+E
Sbjct: 3 APNPKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV S+ ALGRACGVSRP+IA S+T ++ S +K QI A++ +IE
Sbjct: 63 ILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKTQIYAVKDKIE 122
Query: 134 RLLI 137
LLI
Sbjct: 123 TLLI 126
>sp|Q21568|NH2L1_CAEEL NHP2-like protein 1 homolog OS=Caenorhabditis elegans GN=M28.5 PE=3
SV=1
Length = 128
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/126 (76%), Positives = 114/126 (90%)
Query: 12 EPAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEP 71
+ VNPKA+PLADT L+ K++ LVQQA+NYKQL+KGANEATKTLNRG+SE IV+AADAEP
Sbjct: 3 DDGVNPKAFPLADTNLSQKLMDLVQQAMNYKQLKKGANEATKTLNRGISEIIVMAADAEP 62
Query: 72 LEIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQ 131
LEI+LHLPLLCEDKNVPYVFVRSK ALGRACGV+RP+IA S+T +EGSQLK QIQ I++
Sbjct: 63 LEILLHLPLLCEDKNVPYVFVRSKAALGRACGVTRPVIAASITQNEGSQLKSQIQKIKED 122
Query: 132 IERLLI 137
+E+LLI
Sbjct: 123 VEKLLI 128
>sp|Q6CM69|SNU13_KLULA 13 kDa ribonucleoprotein-associated protein OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SNU13 PE=3 SV=1
Length = 126
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 106/124 (85%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD L+ +IL +VQQA N +QL+KGANEATKTLNRG+SEFI++AAD EP+E
Sbjct: 3 APNPKAFPLADATLSQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV S+ ALGRACGVSRP+IA S+T ++ S +K QI A++ +IE
Sbjct: 63 ILLHLPLLCEDKNVPYVFVPSRTALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIE 122
Query: 134 RLLI 137
LLI
Sbjct: 123 TLLI 126
>sp|Q6FQV5|SNU13_CANGA 13 kDa ribonucleoprotein-associated protein OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SNU13 PE=3 SV=1
Length = 126
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 106/124 (85%)
Query: 14 AVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLE 73
A NPKA+PLAD L+ +IL +VQQA N +QL+KGANEATKTLNRG+SEFI++AAD EP+E
Sbjct: 3 APNPKAFPLADEKLSQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIE 62
Query: 74 IVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIE 133
I+LHLPLLCEDKNVPYVFV S+ ALGRACGVSRP+IA S+T ++ S +K QI A++ +IE
Sbjct: 63 ILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKNQIYAVKDKIE 122
Query: 134 RLLI 137
LLI
Sbjct: 123 TLLI 126
>sp|Q54ST0|NH2L1_DICDI NHP2-like protein 1 homolog OS=Dictyostelium discoideum
GN=DDB_G0282243 PE=3 SV=1
Length = 129
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 98/122 (80%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
N KA PLAD+ LT IL L+QQ+ N QL+KGANE TK ++R +EF+VLAADAEPLEI+
Sbjct: 7 NEKAKPLADSKLTLTILDLIQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEIL 66
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
LH+PLLCEDKN+PYVFV SK LGRAC VSRP++AC+VTVD+ SQLK QI ++ ++RL
Sbjct: 67 LHIPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVKDSLDRL 126
Query: 136 LI 137
I
Sbjct: 127 WI 128
>sp|Q971C9|RL7A_SULTO 50S ribosomal protein L7Ae OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLCE+K
Sbjct: 15 LANKVLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKK 74
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
+PYV+V SK+ALG ACG+ + A S + + + K + I +++E L
Sbjct: 75 IPYVYVPSKKALGEACGLQ--VAAASAAIIDPGEAKDLLDEIVKRVEEL 121
>sp|O29494|RL7A_ARCFU 50S ribosomal protein L7Ae OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl7ae PE=1 SV=1
Length = 119
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
+ + LSL+++ +++KG NE TK + RGL++ + +A D +P EIV HLPLLCE+KN
Sbjct: 11 MQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKN 70
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
VPY++V+SK LGRA G+ P A + ++EG +L+ ++ ++ ++I+ L
Sbjct: 71 VPYIYVKSKNDLGRAVGIEVP-CASAAIINEG-ELRKELGSLVEKIKGL 117
>sp|Q9CRB2|NHP2_MOUSE H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2
PE=2 SV=1
Length = 153
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
+NP A PLA LT K+ +++A+ KQ+R+G E K +N+G +VLA D P+E+
Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEV 90
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQ 120
HLP+LCED+N+PYV++ SK LG A G RP V E Q
Sbjct: 91 YCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
>sp|Q5E950|NHP2_BOVIN H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2
PE=2 SV=1
Length = 153
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
+NP A PLA LT K+ +++A+ KQ+R+G E K +N+G +VLA D P+E+
Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEKGIMVLAGDTLPIEV 90
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQ 120
HLP++CED+N+PYV++ SK LG A G RP V E Q
Sbjct: 91 YCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>sp|Q9NX24|NHP2_HUMAN H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2
PE=1 SV=1
Length = 153
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NP A PLA LT K+ +++A+ KQ+R+G E K +N+G +VLA D P+E+
Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVY 91
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQ 120
HLP++CED+N+PYV++ SK LG A G RP V E Q
Sbjct: 92 CHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
>sp|Q5RC65|NHP2_PONAB H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2
PE=2 SV=1
Length = 153
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%)
Query: 16 NPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIV 75
NP A PLA LT K+ +++A+ KQ+R+G E K +N+G +VLA D P+E+
Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVY 91
Query: 76 LHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 107
HLP++CED+N+PYV++ SK LG A G RP
Sbjct: 92 CHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRP 123
>sp|C3N8Q2|RL7A_SULIY 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|C3NMR6|RL7A_SULIN 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|C3MYY9|RL7A_SULIM 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|C3MJN1|RL7A_SULIL 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|C4KJ77|RL7A_SULIK 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|C3N038|RL7A_SULIA 50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain
M.16.27) GN=rpl7ae PE=3 SV=1
Length = 127
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +V+A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|P55858|RL7A_SULSO 50S ribosomal protein L7Ae OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl7ae PE=1 SV=2
Length = 127
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A +++KG NE TK + RG ++ +++A D +P EIV HLPLLC++K
Sbjct: 15 LADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PYV+V SK+ALG ACG+
Sbjct: 75 IPYVYVSSKKALGEACGL 92
>sp|Q4J8P1|RL7A_SULAC 50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius (strain
ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB
11770) GN=rpl7ae PE=3 SV=1
Length = 126
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+L V++A + +++KG NE TK + R ++ +V+A D +P EIV HLPLLCE+K
Sbjct: 15 LADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKK 74
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
+PYV+V SK++LG ACG+ + A SV + + + K + I +++ +
Sbjct: 75 IPYVYVPSKKSLGEACGLQ--VAAASVALMDPGEAKDLVDEIVKRVNEI 121
>sp|P32495|NHP2_YEAST H/ACA ribonucleoprotein complex subunit 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=NHP2 PE=1
SV=2
Length = 156
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%)
Query: 13 PAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPL 72
PAV P A PLA L K+L V++A K +++G E K L +G +V+A D P
Sbjct: 25 PAVLPFAKPLASKKLNKKVLKTVKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPA 84
Query: 73 EIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 107
+++ H+P+LCED +VPY+F+ SKQ LG A RP
Sbjct: 85 DVISHIPVLCEDHSVPYIFIPSKQDLGAAGATKRP 119
>sp|Q9YAX7|RL7A_AERPE 50S ribosomal protein L7Ae OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl7ae
PE=1 SV=1
Length = 127
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K V++A +++KG NE TK + RGL++ +V+A D +P EIV+HLPLLC++K
Sbjct: 15 LAEKAYEAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKK 74
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
+PYV+V SK+ LG A G+ + A SV + E + ++ I ++++ L
Sbjct: 75 IPYVYVPSKKRLGEAAGIE--VAAASVAIIEPGDAETLVREIVEKVKEL 121
>sp|Q6NTV9|NHP2_XENLA H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
laevis GN=nhp2 PE=2 SV=1
Length = 149
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
+NP A PLA LT K+ V++A+ K +R+G E K +N+G +V+A D P+E+
Sbjct: 27 LNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEV 86
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 107
H+P++CED+ +PY +V SK LG A G RP
Sbjct: 87 YCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRP 119
>sp|Q6P8C4|NHP2_XENTR H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus
tropicalis GN=nhp2 PE=2 SV=1
Length = 149
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
+NP A PLA LT K+ V++A+ K +R+G E K +N+G +V+A D P+E+
Sbjct: 27 LNPIAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEV 86
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 107
H+P++CED+ +PY +V SK LG A G RP
Sbjct: 87 YCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRP 119
>sp|B1Y9V4|RL7A_PYRNV 50S ribosomal protein L7Ae OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rpl7ae PE=3 SV=1
Length = 151
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 23 ADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLC 82
AD A K L ++ A +++KG NEATK + RGL++ +++A D +P E+V HLPLLC
Sbjct: 28 ADVA--EKALEVLSVAKQTGKIKKGTNEATKAVERGLAKLVLIAEDVDPPEVVAHLPLLC 85
Query: 83 EDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
E+K VPYV+V SK+ LG+A G++ + A + V E Q +++A+ ++ +
Sbjct: 86 EEKKVPYVYVPSKEKLGKAAGIN--VSAAAAVVIEPGQAAGELEALVSKVNEI 136
>sp|Q5JGR3|RL7A_PYRKO 50S ribosomal protein L7Ae OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl7ae PE=3 SV=2
Length = 123
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K L V+ A + ++RKG NE TK + RG ++ +++A D +P EIV HLP LCE+K
Sbjct: 15 LAEKALEAVEIARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKE 74
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERLL 136
+PYV+V SK+ LG A G+ P A SV + E + + ++ I +++ L+
Sbjct: 75 IPYVYVPSKKELGAAAGLEVP--AASVAIIEPGKARELVEDIAMKVKELM 122
>sp|B6YWH9|RL7A_THEON 50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1)
GN=rpl7ae PE=3 SV=1
Length = 123
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K L V+ A + ++RKG NE TK + RG ++ +++A D +P EIV HLP LCE+K
Sbjct: 15 LAEKALEAVELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKE 74
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERLL 136
+PY++V SK+ LG A G+ P A SV + E + + ++ I ++ L+
Sbjct: 75 IPYIYVPSKKELGAAAGIEVP--AASVAIIEPGKGRELVEEIAMKVRELM 122
>sp|Q8ZTA5|RL7A_PYRAE 50S ribosomal protein L7Ae OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl7ae PE=3 SV=1
Length = 151
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 76/114 (66%), Gaps = 7/114 (6%)
Query: 22 LADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLL 81
+A+ AL +ILS+ +Q +++KG NE TK + RGL++ +++A D +P E+V HLPLL
Sbjct: 30 VAEKAL--EILSIARQT---GKIKKGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLL 84
Query: 82 CEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
CE+K VPYV+V SK+ LG+A G++ + A + V E Q +++A+ +I +
Sbjct: 85 CEEKKVPYVYVPSKEKLGKAAGIN--VSAAAAVVIEPGQAAGELEALVSKINEV 136
>sp|P62427|RL7A_NANEQ 50S ribosomal protein L7Ae OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl7ae PE=3 SV=1
Length = 125
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 56/79 (70%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K+ LV++A ++RKG NE TK + RG ++ +++A + P EIV+HLP LCE+K
Sbjct: 16 LANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKG 75
Query: 87 VPYVFVRSKQALGRACGVS 105
VPYV+V SK+ LG+A G++
Sbjct: 76 VPYVYVPSKEELGKAAGIN 94
>sp|Q9P7H0|NHP2_SCHPO H/ACA ribonucleoprotein complex subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=nhp2 PE=1 SV=1
Length = 154
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 13 PAVNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPL 72
PA+ P A PLA L K++ V++A K + +G E K + +G ++LA D P+
Sbjct: 23 PALMPIAKPLAPKKLNKKMMKTVKKASKQKHILRGVKEVVKAVRKGEKGLVILAGDISPM 82
Query: 73 EIVLHLPLLCEDKNVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQ 120
+++ H+P+LCED NVPY++ SK+ LG A RP +C + V G +
Sbjct: 83 DVISHIPVLCEDNNVPYLYTVSKELLGEASNTKRP-TSCVMIVPGGKK 129
>sp|A3DMR6|RL7A_STAMF 50S ribosomal protein L7Ae OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 27 LTTKILSLVQQALNYK-QLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDK 85
L K+ V++A +++KG NE TK + RG+++ +++A D +P EIV HLPLLC++K
Sbjct: 15 LAEKVYEAVKKARETGGKIKKGTNETTKAVERGIAKLVIIAEDVDPPEIVAHLPLLCDEK 74
Query: 86 NVPYVFVRSKQALGRACGVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
+PYV+V SK+ LG A G+ + A S + + K ++ I +Q++ L
Sbjct: 75 KIPYVYVPSKKRLGEAAGIE--VAAASAAIIDPGGAKDLVEEIIKQVQEL 122
>sp|A4YIL9|RL7A_METS5 50S ribosomal protein L7Ae OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=rpl7ae PE=3 SV=1
Length = 125
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
L K L +++A ++RKG NEATK + RG ++ +++A D +P EIV HLP LCE+K
Sbjct: 15 LAEKALEALKKAKETGKIRKGTNEATKAIERGQAKLVLIAEDVQPEEIVAHLPPLCEEKK 74
Query: 87 VPYVFVRSKQALGRACGV 104
+PY++V +K+ +G ACG+
Sbjct: 75 IPYIYVPTKKGIGEACGL 92
>sp|Q8I7X7|NHP2_BRABE H/ACA ribonucleoprotein complex subunit 2-like protein
OS=Branchiostoma belcheri PE=2 SV=1
Length = 159
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%)
Query: 15 VNPKAYPLADTALTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEI 74
VNP A PLA LT ++ V++A K +RKG + K + +G +++A D P+E+
Sbjct: 37 VNPIASPLAARKLTKRLYKTVKKASKEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEV 96
Query: 75 VLHLPLLCEDKNVPYVFVRSKQALGRACGVSRP 107
HLP++CED +PY +V +KQ LG A G RP
Sbjct: 97 YCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRP 129
>sp|A8A912|RL7A_IGNH4 50S ribosomal protein L7Ae OS=Ignicoccus hospitalis (strain KIN4/I
/ DSM 18386 / JCM 14125) GN=rpl7ae PE=3 SV=1
Length = 128
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 43 QLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKNVPYVFVRSKQALGRAC 102
+++KG NE TK +++GL++ +++A D +P EIV HLPLLCE+K +PYV+V SK+ LG A
Sbjct: 32 KIKKGTNETTKAVDKGLAKLVLIAEDVDPPEIVAHLPLLCEEKKIPYVYVPSKKKLGEAA 91
Query: 103 GVSRPIIACSVTVDEGSQLKPQIQAIQQQIERL 135
G+ A ++ +D G+ K ++ I +++E++
Sbjct: 92 GIEVQAAAAAI-IDPGAA-KDLVEEIIKEVEQI 122
>sp|Q97BK8|RL7A_THEVO 50S ribosomal protein L7Ae OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rpl7ae PE=3 SV=1
Length = 121
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 7/108 (6%)
Query: 27 LTTKILSLVQQALNYKQLRKGANEATKTLNRGLSEFIVLAADAEPLEIVLHLPLLCEDKN 86
++ K L LV+ A +++KG NE K++ RG S+ +V+A D P E+V +LP LCEDK
Sbjct: 14 VSQKALDLVESAFRSGKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKK 73
Query: 87 VPYVFVRSKQALGRACGVSRPIIACSVT-VDEGSQ---LKPQIQAIQQ 130
VPYV+V+ K LG G++ A SV+ VD G K + A++Q
Sbjct: 74 VPYVYVKKKADLGSKVGIAS---AASVSIVDYGKNEELYKSIVSAVEQ 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,981,672
Number of Sequences: 539616
Number of extensions: 1503306
Number of successful extensions: 4447
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 4318
Number of HSP's gapped (non-prelim): 161
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)