Query psy12951
Match_columns 111
No_of_seqs 106 out of 1026
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 23:54:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p3h_A 10 kDa chaperonin; beta 100.0 7.2E-42 2.5E-46 233.4 12.1 97 13-109 2-99 (99)
2 3nx6_A 10KDA chaperonin; bacte 100.0 4.1E-42 1.4E-46 233.1 10.1 95 14-108 1-95 (95)
3 1pcq_O Groes protein; chaperon 100.0 2.2E-41 7.5E-46 230.3 11.2 95 14-108 1-96 (97)
4 1we3_O CPN10(groes); chaperoni 100.0 1.5E-41 5E-46 232.2 9.0 96 13-108 5-100 (100)
5 1g31_A GP31; chaperone, CO-cha 99.9 3.2E-29 1.1E-33 173.8 1.1 88 14-108 7-111 (111)
6 3qwb_A Probable quinone oxidor 89.9 0.28 9.7E-06 37.0 3.8 45 48-107 70-114 (334)
7 3uko_A Alcohol dehydrogenase c 88.4 0.5 1.7E-05 36.4 4.3 25 48-81 69-93 (378)
8 2eih_A Alcohol dehydrogenase; 87.3 0.17 5.6E-06 38.6 0.9 25 48-81 64-88 (343)
9 1zsy_A Mitochondrial 2-enoyl t 87.3 0.66 2.2E-05 35.4 4.3 42 48-104 91-134 (357)
10 3goh_A Alcohol dehydrogenase, 86.5 0.54 1.8E-05 35.2 3.4 44 48-104 65-110 (315)
11 1gu7_A Enoyl-[acyl-carrier-pro 86.4 0.81 2.8E-05 34.8 4.4 42 48-104 79-122 (364)
12 3m6i_A L-arabinitol 4-dehydrog 83.7 0.53 1.8E-05 35.9 2.3 25 48-81 79-103 (363)
13 1wly_A CAAR, 2-haloacrylate re 83.3 0.57 2E-05 35.3 2.3 41 48-103 67-109 (333)
14 3mlq_E Transcription-repair co 83.3 1 3.6E-05 27.8 3.1 31 71-101 2-40 (71)
15 2dq4_A L-threonine 3-dehydroge 82.9 0.59 2E-05 35.4 2.2 25 48-81 64-88 (343)
16 4dup_A Quinone oxidoreductase; 82.8 1.1 3.9E-05 34.1 3.8 43 48-104 92-134 (353)
17 3two_A Mannitol dehydrogenase; 82.8 0.61 2.1E-05 35.4 2.3 25 48-81 65-89 (348)
18 4eez_A Alcohol dehydrogenase 1 82.8 0.62 2.1E-05 35.1 2.3 25 48-81 61-85 (348)
19 4a27_A Synaptic vesicle membra 82.7 0.9 3.1E-05 34.6 3.2 43 48-104 67-109 (349)
20 1f8f_A Benzyl alcohol dehydrog 82.7 0.62 2.1E-05 35.7 2.3 25 48-81 66-90 (371)
21 2d8a_A PH0655, probable L-thre 82.4 0.65 2.2E-05 35.3 2.3 26 48-82 68-93 (348)
22 1cdo_A Alcohol dehydrogenase; 82.1 0.67 2.3E-05 35.6 2.3 25 48-81 69-93 (374)
23 2cf5_A Atccad5, CAD, cinnamyl 82.1 0.68 2.3E-05 35.4 2.3 25 48-81 70-94 (357)
24 1pl8_A Human sorbitol dehydrog 82.0 0.69 2.3E-05 35.3 2.3 25 48-81 70-94 (356)
25 1yqd_A Sinapyl alcohol dehydro 81.9 0.69 2.3E-05 35.6 2.3 24 48-80 77-100 (366)
26 2j8z_A Quinone oxidoreductase; 81.9 1.3 4.6E-05 33.7 3.9 43 48-104 86-129 (354)
27 3jv7_A ADH-A; dehydrogenase, n 81.8 0.71 2.4E-05 34.9 2.3 25 48-81 63-87 (345)
28 4a0s_A Octenoyl-COA reductase/ 81.7 0.69 2.4E-05 36.4 2.3 26 48-82 116-141 (447)
29 1p0f_A NADP-dependent alcohol 81.7 0.71 2.4E-05 35.4 2.3 25 48-81 69-93 (373)
30 1e3j_A NADP(H)-dependent ketos 81.5 0.73 2.5E-05 35.0 2.3 25 48-81 67-91 (352)
31 2fzw_A Alcohol dehydrogenase c 81.5 0.73 2.5E-05 35.3 2.3 25 48-81 67-91 (373)
32 3jyn_A Quinone oxidoreductase; 81.5 0.74 2.5E-05 34.6 2.3 43 48-104 64-107 (325)
33 2jhf_A Alcohol dehydrogenase E 81.4 0.74 2.5E-05 35.3 2.3 26 47-81 67-92 (374)
34 3s2e_A Zinc-containing alcohol 81.3 0.76 2.6E-05 34.7 2.3 25 47-80 63-87 (340)
35 1kol_A Formaldehyde dehydrogen 81.2 0.75 2.6E-05 35.6 2.3 25 48-81 68-92 (398)
36 4dvj_A Putative zinc-dependent 81.2 0.75 2.6E-05 35.4 2.3 44 48-104 88-133 (363)
37 3tqh_A Quinone oxidoreductase; 81.2 0.77 2.6E-05 34.5 2.2 43 48-104 74-120 (321)
38 1e3i_A Alcohol dehydrogenase, 81.1 0.81 2.8E-05 35.1 2.4 25 48-81 68-92 (376)
39 2dph_A Formaldehyde dismutase; 81.0 0.78 2.7E-05 35.6 2.3 25 48-81 67-91 (398)
40 2hcy_A Alcohol dehydrogenase 1 81.0 0.78 2.7E-05 34.8 2.3 25 48-81 67-91 (347)
41 3fpc_A NADP-dependent alcohol 80.7 0.8 2.8E-05 34.8 2.2 25 48-81 60-84 (352)
42 3uog_A Alcohol dehydrogenase; 80.7 0.8 2.7E-05 35.1 2.2 25 48-81 90-114 (363)
43 1rjw_A ADH-HT, alcohol dehydro 80.6 0.82 2.8E-05 34.6 2.3 25 48-81 62-86 (339)
44 2vn8_A Reticulon-4-interacting 80.3 0.84 2.9E-05 35.1 2.2 43 48-103 101-145 (375)
45 3gms_A Putative NADPH:quinone 80.2 0.73 2.5E-05 34.9 1.8 43 48-104 69-111 (340)
46 1uuf_A YAHK, zinc-type alcohol 80.2 0.84 2.9E-05 35.2 2.2 25 48-81 83-107 (369)
47 3krt_A Crotonyl COA reductase; 80.2 0.89 3E-05 36.1 2.4 25 48-81 124-148 (456)
48 1jvb_A NAD(H)-dependent alcoho 80.1 0.86 3E-05 34.6 2.2 24 48-80 69-92 (347)
49 3fbg_A Putative arginate lyase 80.0 0.99 3.4E-05 34.3 2.5 44 48-104 66-111 (346)
50 1qor_A Quinone oxidoreductase; 79.8 0.91 3.1E-05 34.0 2.3 42 48-103 64-106 (327)
51 1h2b_A Alcohol dehydrogenase; 79.8 0.9 3.1E-05 34.8 2.2 24 48-80 80-103 (359)
52 3gqv_A Enoyl reductase; medium 79.7 1.6 5.5E-05 33.5 3.7 26 47-81 68-93 (371)
53 3ip1_A Alcohol dehydrogenase, 79.6 1.1 3.6E-05 35.0 2.7 30 48-81 98-128 (404)
54 3iup_A Putative NADPH:quinone 79.0 1.2 4E-05 34.5 2.7 42 48-104 97-139 (379)
55 3gaz_A Alcohol dehydrogenase s 78.7 1.1 3.9E-05 34.0 2.5 46 48-104 70-117 (343)
56 4ej6_A Putative zinc-binding d 78.7 0.98 3.4E-05 34.8 2.2 25 48-81 82-106 (370)
57 1yb5_A Quinone oxidoreductase; 78.6 0.91 3.1E-05 34.8 1.9 42 48-103 94-136 (351)
58 2h6e_A ADH-4, D-arabinose 1-de 78.6 1.1 3.7E-05 34.0 2.3 24 48-81 66-89 (344)
59 3pi7_A NADH oxidoreductase; gr 76.2 0.76 2.6E-05 34.9 0.9 42 48-104 86-132 (349)
60 3pqh_A Gene product 138; beta- 75.4 4.3 0.00015 28.1 4.5 38 45-90 15-52 (127)
61 3slk_A Polyketide synthase ext 75.1 2.5 8.7E-05 36.4 3.9 43 47-104 270-312 (795)
62 4a2c_A Galactitol-1-phosphate 72.4 1.9 6.5E-05 32.3 2.3 26 48-82 60-85 (346)
63 2lqk_A Transcriptional regulat 74.5 0.78 2.7E-05 28.3 0.0 31 71-101 6-44 (70)
64 2b5w_A Glucose dehydrogenase; 71.9 1.7 5.9E-05 33.0 2.0 23 48-81 64-86 (357)
65 2c0c_A Zinc binding alcohol de 71.2 2.3 8E-05 32.5 2.5 42 48-103 90-131 (362)
66 4eye_A Probable oxidoreductase 70.8 3.3 0.00011 31.3 3.3 42 48-104 85-126 (342)
67 1piw_A Hypothetical zinc-type 70.7 2.3 8E-05 32.3 2.5 25 48-80 69-93 (360)
68 2k1g_A Lipoprotein SPR; soluti 64.2 1.1 3.7E-05 30.9 -0.6 36 35-83 44-79 (135)
69 2ozi_A Hypothetical protein RP 61.5 16 0.00055 23.1 4.8 42 51-92 39-83 (98)
70 4e2q_A Ureidoglycine aminohydr 60.4 17 0.00057 27.6 5.4 51 48-100 207-260 (266)
71 3es4_A Uncharacterized protein 56.9 14 0.00048 24.7 4.0 35 63-99 77-113 (116)
72 3v2d_V 50S ribosomal protein L 55.2 36 0.0012 22.3 5.7 29 71-102 13-44 (101)
73 1sq4_A GLXB, glyoxylate-induce 55.0 23 0.00079 26.4 5.4 50 48-99 212-264 (278)
74 1vj0_A Alcohol dehydrogenase, 52.7 7.1 0.00024 29.9 2.2 30 48-81 78-107 (380)
75 3gt2_A Putative uncharacterize 52.2 2.6 9E-05 28.8 -0.3 34 36-82 67-100 (142)
76 1sfn_A Conserved hypothetical 48.7 36 0.0012 24.6 5.5 50 49-100 187-239 (246)
77 2jyx_A Lipoprotein SPR; soluti 45.9 2.2 7.6E-05 28.9 -1.5 35 36-83 45-79 (136)
78 1at0_A 17-hedgehog; developmen 45.3 36 0.0012 23.0 4.7 26 61-86 9-35 (145)
79 3bu7_A Gentisate 1,2-dioxygena 45.3 29 0.001 27.7 4.8 46 55-102 321-368 (394)
80 3nx4_A Putative oxidoreductase 37.4 17 0.00059 26.7 2.2 44 48-104 64-110 (324)
81 3pbi_A Invasion protein; pepti 37.2 6.2 0.00021 29.1 -0.3 34 36-82 136-169 (214)
82 2j3h_A NADP-dependent oxidored 35.9 14 0.00046 27.6 1.4 24 48-80 77-102 (345)
83 3ne0_A Resuscitation promoting 34.9 8.5 0.00029 28.4 0.1 34 36-82 136-169 (214)
84 3h41_A NLP/P60 family protein; 33.3 7.7 0.00026 29.6 -0.4 34 36-82 227-260 (311)
85 4hpe_A Putative cell WALL hydr 33.0 6.4 0.00022 30.3 -0.9 34 36-82 226-259 (308)
86 2z1c_A Hydrogenase expression/ 31.9 28 0.00096 21.6 2.2 12 71-82 35-46 (75)
87 1bkb_A Translation initiation 31.8 87 0.003 21.0 4.9 39 63-101 53-94 (136)
88 2hbw_A NLP/P60 protein; NLP/P6 31.7 6.6 0.00023 29.2 -1.0 35 36-83 138-172 (235)
89 1b12_A Signal peptidase I; ser 31.7 79 0.0027 22.9 5.0 67 18-92 21-93 (248)
90 1iz6_A Initiation factor 5A; S 30.6 79 0.0027 21.4 4.5 39 63-101 51-92 (138)
91 3npf_A Putative dipeptidyl-pep 30.2 13 0.00043 28.0 0.4 38 36-82 194-231 (306)
92 1ypr_A Profilin; actin-binding 29.1 39 0.0013 22.4 2.7 17 86-102 58-74 (125)
93 3d9y_A Profilin; yeast, actin- 28.4 41 0.0014 22.3 2.7 18 85-102 59-76 (127)
94 4fdy_A Similar to lipoprotein, 28.0 8.5 0.00029 29.9 -1.0 34 36-82 230-263 (313)
95 2opk_A Hypothetical protein; p 27.2 57 0.0019 20.5 3.1 39 52-90 57-95 (112)
96 1wv3_A Similar to DNA segregat 26.9 1E+02 0.0035 22.5 4.9 42 58-102 134-178 (238)
97 3cpf_A Eukaryotic translation 26.7 77 0.0026 21.4 3.9 40 63-102 51-93 (138)
98 1acf_A Profilin I; protein bin 26.6 46 0.0016 21.9 2.7 17 86-102 58-74 (125)
99 2d40_A Z3393, putative gentisa 26.4 1.1E+02 0.0036 23.6 5.1 43 56-101 296-338 (354)
100 3t64_A Deoxyuridine 5'-triphos 25.9 43 0.0015 23.7 2.6 42 35-78 84-136 (181)
101 3lwc_A Uncharacterized protein 25.5 78 0.0027 20.3 3.6 32 57-90 68-99 (119)
102 3kgl_A Cruciferin; 11S SEED gl 25.1 2.1E+02 0.0072 23.3 6.9 34 63-96 362-396 (466)
103 2e9q_A 11S globulin subunit be 24.7 1.9E+02 0.0064 23.4 6.5 20 71-90 370-389 (459)
104 4ash_A NS6 protease; hydrolase 24.4 94 0.0032 22.4 4.1 53 19-77 54-106 (185)
105 3nw4_A Gentisate 1,2-dioxygena 24.4 90 0.0031 24.7 4.4 47 52-101 303-349 (368)
106 1rc6_A Hypothetical protein YL 24.1 2E+02 0.0068 20.6 6.1 47 51-99 203-253 (261)
107 3nw4_A Gentisate 1,2-dioxygena 23.7 58 0.002 25.8 3.2 41 57-99 132-174 (368)
108 3r8s_R 50S ribosomal protein L 23.5 1.6E+02 0.0054 19.1 5.9 21 71-91 13-36 (103)
109 1tt7_A YHFP; alcohol dehydroge 23.4 40 0.0014 24.8 2.1 43 48-103 68-113 (330)
110 3bcw_A Uncharacterized protein 23.3 99 0.0034 20.1 3.9 26 57-84 77-103 (123)
111 3nsx_A Alpha-glucosidase; stru 23.3 89 0.0031 26.4 4.4 69 14-82 546-620 (666)
112 1xa0_A Putative NADPH dependen 22.1 46 0.0016 24.5 2.2 43 48-103 67-112 (328)
113 4b7c_A Probable oxidoreductase 21.9 50 0.0017 24.3 2.4 37 49-104 78-114 (336)
114 1ueb_A EF-P, TT0860, elongatio 21.8 98 0.0033 22.0 3.8 39 63-101 45-86 (184)
115 1z6h_A Biotin/lipoyl attachmen 21.7 63 0.0021 18.3 2.4 33 78-110 38-70 (72)
116 3qac_A 11S globulin SEED stora 21.3 2.4E+02 0.0081 23.0 6.4 24 63-86 362-386 (465)
117 2zb4_A Prostaglandin reductase 20.8 35 0.0012 25.5 1.3 38 48-103 83-120 (357)
118 3bu7_A Gentisate 1,2-dioxygena 20.7 88 0.003 24.9 3.7 42 55-98 150-194 (394)
119 1yby_A Translation elongation 20.3 94 0.0032 22.8 3.5 39 63-101 75-116 (215)
120 2kd2_A FAS apoptotic inhibitor 20.2 74 0.0025 20.7 2.6 28 83-110 12-39 (94)
121 4axo_A EUTQ, ethanolamine util 20.0 2.2E+02 0.0074 19.4 5.7 33 49-84 86-118 (151)
No 1
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=100.00 E-value=7.2e-42 Score=233.36 Aligned_cols=97 Identities=39% Similarity=0.660 Sum_probs=94.3
Q ss_pred ccceeeeCCeEEEEecCCCCcccceEEeccCccccceeeEEEEecCceeCCCC-eeecceeeeCCEEEccCCCceEEEEC
Q psy12951 13 SQKFRPLLDRILVIKDEPLTKTKGGVLIPEKAQQEVNNAVVVAVGPGARTPNG-EYIKPVVNVGDKVLLPKFGGTKIEVE 91 (111)
Q Consensus 13 ~~~i~PlgDrVLVk~~~~e~~T~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G-~~~p~~vk~GD~Vl~~~y~g~~v~~~ 91 (111)
.++|+||+|||||++.++|++|+|||+||+++++|+++|+|+|||||+.+++| +++|++||+||+|+|++|+|++|+++
T Consensus 2 ~~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~d 81 (99)
T 1p3h_A 2 KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYN 81 (99)
T ss_dssp CCEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEET
T ss_pred CceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEEC
Confidence 47899999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred CEEEEEEecCcEEEEeec
Q psy12951 92 GQELHLFKEADLLAVIEK 109 (111)
Q Consensus 92 g~~y~iv~~~DIlavi~~ 109 (111)
|++|+++|++||||++++
T Consensus 82 geey~i~re~DIlavi~~ 99 (99)
T 1p3h_A 82 GEEYLILSARDVLAVVSK 99 (99)
T ss_dssp TEEEEEEEGGGEEEEEEC
T ss_pred CEEEEEEEhHhEEEEeeC
Confidence 999999999999999974
No 2
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=100.00 E-value=4.1e-42 Score=233.10 Aligned_cols=95 Identities=38% Similarity=0.658 Sum_probs=73.6
Q ss_pred cceeeeCCeEEEEecCCCCcccceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCE
Q psy12951 14 QKFRPLLDRILVIKDEPLTKTKGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQ 93 (111)
Q Consensus 14 ~~i~PlgDrVLVk~~~~e~~T~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~ 93 (111)
|+|+||+|||||++.++|++|+|||+||+++++|+++|+|+|||||+.+++|+++|++||+||+|+|++|+|++|++||+
T Consensus 1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ 80 (95)
T 3nx6_A 1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGV 80 (95)
T ss_dssp -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTE
T ss_pred CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCcEEEEee
Q psy12951 94 ELHLFKEADLLAVIE 108 (111)
Q Consensus 94 ~y~iv~~~DIlavi~ 108 (111)
+|+++|++||||+++
T Consensus 81 ey~i~re~DILavie 95 (95)
T 3nx6_A 81 EYKVLREDDILAVIG 95 (95)
T ss_dssp EEEEEEGGGEEEECC
T ss_pred EEEEEEHHHEEEEeC
Confidence 999999999999985
No 3
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=100.00 E-value=2.2e-41 Score=230.25 Aligned_cols=95 Identities=34% Similarity=0.570 Sum_probs=93.1
Q ss_pred cceeeeCCeEEEEecCCCCcccceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC-CCceEEEECC
Q psy12951 14 QKFRPLLDRILVIKDEPLTKTKGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEG 92 (111)
Q Consensus 14 ~~i~PlgDrVLVk~~~~e~~T~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y~g~~v~~~g 92 (111)
|+|+||+|||||++.++|++|+|||+||+++++|+++|+|+|||||+.+++|+++|++||+||+|+|++ |+|++|+++|
T Consensus 1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dg 80 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN 80 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETT
T ss_pred CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECC
Confidence 579999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred EEEEEEecCcEEEEee
Q psy12951 93 QELHLFKEADLLAVIE 108 (111)
Q Consensus 93 ~~y~iv~~~DIlavi~ 108 (111)
++|+++|++||||+++
T Consensus 81 eey~i~re~DIlavv~ 96 (97)
T 1pcq_O 81 EEVLIMSESDILAIVE 96 (97)
T ss_dssp EEEEEEEGGGEEEEEE
T ss_pred EEEEEEEhHHEEEEec
Confidence 9999999999999997
No 4
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=100.00 E-value=1.5e-41 Score=232.19 Aligned_cols=96 Identities=40% Similarity=0.687 Sum_probs=93.3
Q ss_pred ccceeeeCCeEEEEecCCCCcccceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC
Q psy12951 13 SQKFRPLLDRILVIKDEPLTKTKGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG 92 (111)
Q Consensus 13 ~~~i~PlgDrVLVk~~~~e~~T~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g 92 (111)
.++|+||+|||||++.++|++|+|||+||+++++|+++|+|+|||||+.+++|+++|++||+||+|+|++|+|++|+++|
T Consensus 5 ~~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dg 84 (100)
T 1we3_O 5 KTVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDG 84 (100)
T ss_dssp CCCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSS
T ss_pred cceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCcEEEEee
Q psy12951 93 QELHLFKEADLLAVIE 108 (111)
Q Consensus 93 ~~y~iv~~~DIlavi~ 108 (111)
++|+++|++||||+++
T Consensus 85 eeyli~re~DIlavi~ 100 (100)
T 1we3_O 85 EEYVILSERDLLAVLQ 100 (100)
T ss_dssp CEEEEECTTTEEEEEC
T ss_pred EEEEEEEhHHEEEEeC
Confidence 9999999999999985
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.95 E-value=3.2e-29 Score=173.79 Aligned_cols=88 Identities=17% Similarity=0.235 Sum_probs=79.9
Q ss_pred cceeeeCCeEEEEecC----CCCcccceEEeccC-ccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC--CC--
Q psy12951 14 QKFRPLLDRILVIKDE----PLTKTKGGVLIPEK-AQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK--FG-- 84 (111)
Q Consensus 14 ~~i~PlgDrVLVk~~~----~e~~T~gGIiLP~~-~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~--y~-- 84 (111)
++|+||+|||||++.+ +|++|+|||+||++ +++||+.|+|+|||+|+ .++.||+||+|+|++ |+
T Consensus 7 m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~~nv 79 (111)
T 1g31_A 7 LPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQIRNV 79 (111)
T ss_dssp CSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS-------CTTSCCTTCEEEEEGGGCEEE
T ss_pred cCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCC-------ccccccCCCEEEECCCccccC
Confidence 7899999999999988 78999999999999 58999999999999987 346799999999954 77
Q ss_pred ------ceEEEECC--EEEEEEecCcEEEEee
Q psy12951 85 ------GTKIEVEG--QELHLFKEADLLAVIE 108 (111)
Q Consensus 85 ------g~~v~~~g--~~y~iv~~~DIlavi~ 108 (111)
+.+++.++ ++|++++++||||+++
T Consensus 80 p~p~vi~g~i~~~~~~e~y~i~~~~dIlavy~ 111 (111)
T 1g31_A 80 PHPFVALGLKQPKEIKQKFVTCHYKAIPCLYK 111 (111)
T ss_dssp CCHHHHTTSSCGGGCCCCEEEEEGGGCCEECC
T ss_pred CCcceeeeEEccCCcccEEEEEehHHeEEEeC
Confidence 77899988 8999999999999874
No 6
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.85 E-value=0.28 Score=37.02 Aligned_cols=45 Identities=20% Similarity=0.211 Sum_probs=29.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEEEEe
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLLAVI 107 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIlavi 107 (111)
...|+|+++|++.. .+++||+|.+...++. .+|..++..+-+..+
T Consensus 70 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~G~~------aey~~v~~~~~~~~~ 114 (334)
T 3qwb_A 70 EASGTVVAKGKGVT---------NFEVGDQVAYISNSTF------AQYSKISSQGPVMKL 114 (334)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCS------BSEEEEETTSSEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEeeCCcc------eEEEEecCcceEEEC
Confidence 46899999999864 5899999986432221 367777733333333
No 7
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=88.40 E-value=0.5 Score=36.38 Aligned_cols=25 Identities=32% Similarity=0.464 Sum_probs=20.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (378)
T 3uko_A 69 EAAGIVESVGEGVT---------EVQAGDHVIPC 93 (378)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------cCCCCCEEEEe
Confidence 56899999999865 58999999854
No 8
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=87.33 E-value=0.17 Score=38.56 Aligned_cols=25 Identities=40% Similarity=0.590 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|.+.
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2eih_A 64 DGSGVVDAVGPGVE---------GFAPGDEVVIN 88 (343)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence 56899999999864 58999999964
No 9
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=87.27 E-value=0.66 Score=35.44 Aligned_cols=42 Identities=33% Similarity=0.416 Sum_probs=29.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|...... +| -+|+.++++.+.
T Consensus 91 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~------~G~~aey~~v~~~~~~ 134 (357)
T 1zsy_A 91 EGVAQVVAVGSNVT---------GLKPGDWVIPANAG------LGTWRTEAVFSEEALI 134 (357)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEESSSC------SCCSBSEEEEEGGGEE
T ss_pred eEEEEEEEeCCCCC---------CCCCCCEEEEcCCC------CccceeEEecCHHHcE
Confidence 46799999999864 58999999865421 12 467777766543
No 10
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=86.48 E-value=0.54 Score=35.17 Aligned_cols=44 Identities=18% Similarity=0.256 Sum_probs=30.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|....... .+| .+|++++++.+.
T Consensus 65 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~----~~G~~aey~~v~~~~~~ 110 (315)
T 3goh_A 65 DGAGVIVKVGAKVD---------SKMLGRRVAYHTSLK----RHGSFAEFTVLNTDRVM 110 (315)
T ss_dssp EEEEEEEEECTTSC---------GGGTTCEEEEECCTT----SCCSSBSEEEEETTSEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEeCCCC----CCcccccEEEEcHHHhc
Confidence 56899999999864 589999999743100 012 477777776543
No 11
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=86.36 E-value=0.81 Score=34.81 Aligned_cols=42 Identities=24% Similarity=0.329 Sum_probs=29.3
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC--CCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK--FGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~--y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|.... +++ =-+|++++++.+.
T Consensus 79 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~------~aey~~v~~~~~~ 122 (364)
T 1gu7_A 79 EGLFEVIKVGSNVS---------SLEAGDWVIPSHVNFGT------WRTHALGNDDDFI 122 (364)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEESSSCCCC------SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCCC---------cCCCCCEEEecCCCCCc------chheEecCHHHeE
Confidence 46799999999864 589999998653 111 0467777766543
No 12
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=83.75 E-value=0.53 Score=35.90 Aligned_cols=25 Identities=32% Similarity=0.585 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 79 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 103 (363)
T 3m6i_A 79 ESAGEVIAVHPSVK---------SIKVGDRVAIE 103 (363)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 46899999999875 58999999864
No 13
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=83.32 E-value=0.57 Score=35.29 Aligned_cols=41 Identities=32% Similarity=0.403 Sum_probs=28.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCC--CceEEEECCEEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF--GGTKIEVEGQELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y--~g~~v~~~g~~y~iv~~~DI 103 (111)
...|+|+++|++.. .+++||+|.+... ++ =-+|+.++++.+
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~------~aey~~v~~~~~ 109 (333)
T 1wly_A 67 EAAAVVEEVGPGVT---------DFTVGERVCTCLPPLGA------YSQERLYPAEKL 109 (333)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECSSSCCC------SBSEEEEEGGGC
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCCc------ceeEEEecHHHc
Confidence 57899999999864 5899999976432 11 046777776554
No 14
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=83.28 E-value=1 Score=27.84 Aligned_cols=31 Identities=26% Similarity=0.432 Sum_probs=10.6
Q ss_pred eeeeCCEEEccCCC-c-----eEEEECC--EEEEEEecC
Q psy12951 71 VVNVGDKVLLPKFG-G-----TKIEVEG--QELHLFKEA 101 (111)
Q Consensus 71 ~vk~GD~Vl~~~y~-g-----~~v~~~g--~~y~iv~~~ 101 (111)
.+++||.|+++.|+ | .+.+++| .+|+.+...
T Consensus 2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y~ 40 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYK 40 (71)
T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEET
T ss_pred cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEEC
Confidence 47899999999988 3 3456677 478877654
No 15
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=82.92 E-value=0.59 Score=35.45 Aligned_cols=25 Identities=52% Similarity=0.663 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2dq4_A 64 EFSGVVEAVGPGVR---------RPQVGDHVSLE 88 (343)
T ss_dssp EEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEC
Confidence 56899999999864 58999999974
No 16
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=82.83 E-value=1.1 Score=34.11 Aligned_cols=43 Identities=35% Similarity=0.436 Sum_probs=29.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|..-...|. =.+|+.++++.+.
T Consensus 92 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 134 (353)
T 4dup_A 92 ELSGEIVGVGPGVS---------GYAVGDKVCGLANGGA-----YAEYCLLPAGQIL 134 (353)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEecCCCc-----eeeEEEEcHHHcE
Confidence 46899999999875 5899999985322210 0467777776653
No 17
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.80 E-value=0.61 Score=35.41 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 65 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 89 (348)
T 3two_A 65 EIAGIIKEVGKGVK---------KFKIGDVVGVG 89 (348)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEe
Confidence 57899999999864 58999999763
No 18
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.79 E-value=0.62 Score=35.10 Aligned_cols=25 Identities=24% Similarity=0.445 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 61 E~aG~V~~vG~~V~---------~~~~GdrV~~~ 85 (348)
T 4eez_A 61 EGIGIVKEIGADVS---------SLQVGDRVSVA 85 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred eEEEEEEEECceee---------ecccCCeEeec
Confidence 46799999999875 58999999764
No 19
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=82.71 E-value=0.9 Score=34.55 Aligned_cols=43 Identities=16% Similarity=0.102 Sum_probs=29.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|......|. =.+|+.++++.+.
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~ 109 (349)
T 4a27_A 67 ECSGIVEALGDSVK---------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY 109 (349)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence 56899999999864 5899999985432110 0456777665543
No 20
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=82.69 E-value=0.62 Score=35.71 Aligned_cols=25 Identities=32% Similarity=0.663 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 66 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 90 (371)
T 1f8f_A 66 EGSGIIEAIGPNVT---------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ccceEEEEeCCCCC---------CCCCCCEEEec
Confidence 57899999999864 58999999864
No 21
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=82.37 E-value=0.65 Score=35.26 Aligned_cols=26 Identities=35% Similarity=0.532 Sum_probs=21.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
...|+|+++|++.. .+++||+|....
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~~ 93 (348)
T 2d8a_A 68 EVAGEVVEIGPGVE---------GIEVGDYVSVET 93 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEcC
Confidence 46799999999864 589999998753
No 22
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=82.11 E-value=0.67 Score=35.55 Aligned_cols=25 Identities=32% Similarity=0.530 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 93 (374)
T 1cdo_A 69 EGAGIVESVGPGVT---------EFQPGEKVIPL 93 (374)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCc---------cCCCCCEEEeC
Confidence 56899999999874 58999999865
No 23
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=82.10 E-value=0.68 Score=35.42 Aligned_cols=25 Identities=32% Similarity=0.271 Sum_probs=20.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|.+.
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 94 (357)
T 2cf5_A 70 EVVGEVVEVGSDVS---------KFTVGDIVGVG 94 (357)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEc
Confidence 56899999999874 58999999853
No 24
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=81.98 E-value=0.69 Score=35.32 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 70 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 94 (356)
T 1pl8_A 70 EASGTVEKVGSSVK---------HLKPGDRVAIE 94 (356)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 56799999999864 58999999864
No 25
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=81.94 E-value=0.69 Score=35.59 Aligned_cols=24 Identities=42% Similarity=0.437 Sum_probs=20.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
...|+|+++|++.. .+++||+|.+
T Consensus 77 E~~G~V~~vG~~V~---------~~~vGDrV~~ 100 (366)
T 1yqd_A 77 EIVGEVTEVGSKVK---------KVNVGDKVGV 100 (366)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred ceEEEEEEECCCCC---------cCCCCCEEEE
Confidence 56899999999875 5899999985
No 26
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=81.86 E-value=1.3 Score=33.70 Aligned_cols=43 Identities=23% Similarity=0.332 Sum_probs=29.2
Q ss_pred ceeeEEEEecCce-eCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~-~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++. . .+++||+|......|. =-+|++++++.+.
T Consensus 86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 129 (354)
T 2j8z_A 86 EASGHVAELGPGCQG---------HWKIGDTAMALLPGGG-----QAQYVTVPEGLLM 129 (354)
T ss_dssp EEEEEEEEECSCC-----------CCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCcCC---------CCCCCCEEEEecCCCc-----ceeEEEeCHHHcE
Confidence 5679999999876 3 5899999986432220 1477777766543
No 27
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.79 E-value=0.71 Score=34.95 Aligned_cols=25 Identities=28% Similarity=0.363 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 63 e~~G~V~~vG~~v~---------~~~vGdrV~~~ 87 (345)
T 3jv7_A 63 EGVGTVAELGEGVT---------GFGVGDAVAVY 87 (345)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 46899999999864 58999999874
No 28
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=81.74 E-value=0.69 Score=36.41 Aligned_cols=26 Identities=35% Similarity=0.441 Sum_probs=21.6
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
...|+|+++|++.. .+++||+|....
T Consensus 116 E~~G~V~~vG~~V~---------~~~vGDrV~~~~ 141 (447)
T 4a0s_A 116 DCSGVVVRTGIGVR---------RWKPGDHVIVHP 141 (447)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECS
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEec
Confidence 46799999999875 589999999743
No 29
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=81.66 E-value=0.71 Score=35.39 Aligned_cols=25 Identities=36% Similarity=0.496 Sum_probs=21.3
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (373)
T 1p0f_A 69 EAVGVVESIGAGVT---------CVKPGDKVIPL 93 (373)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CceEEEEEECCCCC---------ccCCCCEEEEC
Confidence 57899999999874 58999999865
No 30
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.53 E-value=0.73 Score=35.05 Aligned_cols=25 Identities=28% Similarity=0.462 Sum_probs=20.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 91 (352)
T 1e3j_A 67 EASGTVVKVGKNVK---------HLKKGDRVAVE 91 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------CCCCCCEEEEc
Confidence 46799999999864 58999999864
No 31
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=81.49 E-value=0.73 Score=35.26 Aligned_cols=25 Identities=28% Similarity=0.509 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 91 (373)
T 2fzw_A 67 LGAGIVESVGEGVT---------KLKAGDTVIPL 91 (373)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cccEEEEEECCCCC---------CCCCCCEEEEC
Confidence 57899999999874 58999999865
No 32
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=81.47 E-value=0.74 Score=34.61 Aligned_cols=43 Identities=35% Similarity=0.429 Sum_probs=30.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC-CCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-FGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|.+.. ..|. =-+|+.++++.+.
T Consensus 64 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~ 107 (325)
T 3jyn_A 64 EGAGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA-----YSEVHVLPEANLV 107 (325)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESSSSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCcc-----ccceEEecHHHeE
Confidence 56899999999864 589999998754 1111 0367777776643
No 33
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=81.42 E-value=0.74 Score=35.32 Aligned_cols=26 Identities=31% Similarity=0.486 Sum_probs=21.6
Q ss_pred cceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 47 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 47 k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
-...|+|+++|++.. .+++||+|...
T Consensus 67 hE~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (374)
T 2jhf_A 67 HEAAGIVESIGEGVT---------TVRPGDKVIPL 92 (374)
T ss_dssp CSEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cCceEEEEEECCCCC---------CCCCCCEEEEC
Confidence 357899999999874 58999999865
No 34
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=81.33 E-value=0.76 Score=34.70 Aligned_cols=25 Identities=36% Similarity=0.440 Sum_probs=20.6
Q ss_pred cceeeEEEEecCceeCCCCeeecceeeeCCEEEc
Q psy12951 47 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 47 k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
-...|+|+++|++.. .+++||+|.+
T Consensus 63 ~E~~G~V~~vG~~v~---------~~~vGdrV~~ 87 (340)
T 3s2e_A 63 HEGVGYVSAVGSGVS---------RVKEGDRVGV 87 (340)
T ss_dssp SEEEEEEEEECSSCC---------SCCTTCEEEE
T ss_pred CcceEEEEEECCCCC---------cCCCCCEEEe
Confidence 357899999999864 5899999953
No 35
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=81.25 E-value=0.75 Score=35.56 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 92 (398)
T 1kol_A 68 EITGEVIEKGRDVE---------NLQIGDLVSVP 92 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred ccEEEEEEECCCCC---------cCCCCCEEEEC
Confidence 57899999999864 58999999863
No 36
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=81.22 E-value=0.75 Score=35.39 Aligned_cols=44 Identities=30% Similarity=0.355 Sum_probs=29.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|.+.... ..+| -+|.+++++.+.
T Consensus 88 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~ 133 (363)
T 4dvj_A 88 DAAGIVSAVGPDVT---------LFRPGDEVFYAGSI----IRPGTNAEFHLVDERIVG 133 (363)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECCCT----TSCCSCBSEEEEEGGGCE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEccCC----CCCccceEEEEeCHHHee
Confidence 57899999999864 58999999974210 0011 477777766543
No 37
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=81.16 E-value=0.77 Score=34.46 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=29.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC-C---CceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK-F---GGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y---~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|.... + .|. =-+|+.++++.+.
T Consensus 74 E~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~G~-----~aey~~v~~~~~~ 120 (321)
T 3tqh_A 74 DFSGEVIELGSDVN---------NVNIGDKVMGIAGFPDHPCC-----YAEYVCASPDTII 120 (321)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSTTTCCCC-----SBSEEEECGGGEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEccCCCCCCCc-----ceEEEEecHHHhc
Confidence 46899999999874 589999998532 2 111 1467777776654
No 38
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=81.09 E-value=0.81 Score=35.10 Aligned_cols=25 Identities=36% Similarity=0.505 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (376)
T 1e3i_A 68 ECAGIVESVGPGVT---------NFKPGDKVIPF 92 (376)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cccEEEEEECCCCc---------cCCCCCEEEEC
Confidence 57899999999864 58999999864
No 39
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=80.97 E-value=0.78 Score=35.62 Aligned_cols=25 Identities=28% Similarity=0.477 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 91 (398)
T 2dph_A 67 EITGEVVEKGSDVE---------LMDIGDLVSVP 91 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEc
Confidence 56899999999864 58999999864
No 40
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=80.97 E-value=0.78 Score=34.79 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=20.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 91 (347)
T 2hcy_A 67 EGAGVVVGMGENVK---------GWKIGDYAGIK 91 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------CCcCCCEEEEe
Confidence 46799999999864 58999999863
No 41
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=80.71 E-value=0.8 Score=34.80 Aligned_cols=25 Identities=32% Similarity=0.510 Sum_probs=21.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 60 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 84 (352)
T 3fpc_A 60 EAVGEVVEVGSEVK---------DFKPGDRVVVP 84 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEc
Confidence 47899999999864 58999999964
No 42
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=80.70 E-value=0.8 Score=35.10 Aligned_cols=25 Identities=32% Similarity=0.376 Sum_probs=21.2
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 90 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 114 (363)
T 3uog_A 90 DMSGVVEAVGKSVT---------RFRPGDRVIST 114 (363)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 56899999999864 58999999865
No 43
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=80.62 E-value=0.82 Score=34.64 Aligned_cols=25 Identities=40% Similarity=0.705 Sum_probs=20.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 62 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 86 (339)
T 1rjw_A 62 EGVGIVEEVGPGVT---------HLKVGDRVGIP 86 (339)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEe
Confidence 57899999999864 58999999864
No 44
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=80.25 E-value=0.84 Score=35.06 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=29.6
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DI 103 (111)
...|+|+++|++.. .+++||+|....... .+| -+|++++++.+
T Consensus 101 E~~G~V~~vG~~V~---------~~~vGDrV~~~~~~~----~~G~~aey~~v~~~~~ 145 (375)
T 2vn8_A 101 DVSGVVMECGLDVK---------YFKPGDEVWAAVPPW----KQGTLSEFVVVSGNEV 145 (375)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCTT----SCCSSBSEEEEEGGGE
T ss_pred eeeEEEEEeCCCCC---------CCCCCCEEEEecCCC----CCccceeEEEEcHHHe
Confidence 57899999999864 589999998643110 012 47777776654
No 45
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=80.23 E-value=0.73 Score=34.89 Aligned_cols=43 Identities=23% Similarity=0.123 Sum_probs=29.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|..-...|. =-+|++++++.+.
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 111 (340)
T 3gms_A 69 EGVGIVENVGAFVS---------RELIGKRVLPLRGEGT-----WQEYVKTSADFVV 111 (340)
T ss_dssp CCEEEEEEECTTSC---------GGGTTCEEEECSSSCS-----SBSEEEEEGGGEE
T ss_pred ceEEEEEEeCCCCC---------CCCCCCEEEecCCCcc-----ceeEEEcCHHHeE
Confidence 56899999999864 5899999984321110 0467777776543
No 46
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=80.23 E-value=0.84 Score=35.25 Aligned_cols=25 Identities=32% Similarity=0.177 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 83 E~~G~V~~vG~~V~---------~~~vGDrV~~~ 107 (369)
T 1uuf_A 83 EIVGRVVAVGDQVE---------KYAPGDLVGVG 107 (369)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEEc
Confidence 57899999999874 58999999853
No 47
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.22 E-value=0.89 Score=36.08 Aligned_cols=25 Identities=32% Similarity=0.497 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 124 E~~G~Vv~vG~~v~---------~~~vGdrV~~~ 148 (456)
T 3krt_A 124 DLAGVVLRTGPGVN---------AWQAGDEVVAH 148 (456)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 35799999999875 58999999973
No 48
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=80.14 E-value=0.86 Score=34.56 Aligned_cols=24 Identities=21% Similarity=0.135 Sum_probs=20.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
...|+|+++|++.. .+++||+|..
T Consensus 69 e~~G~V~~vG~~v~---------~~~vGdrV~~ 92 (347)
T 1jvb_A 69 EIAGKIEEVGDEVV---------GYSKGDLVAV 92 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred cceEEEEEECCCCC---------CCCCCCEEEe
Confidence 46799999999864 5899999963
No 49
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=79.98 E-value=0.99 Score=34.27 Aligned_cols=44 Identities=27% Similarity=0.277 Sum_probs=29.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|.+..... .+| .+|++++++.+.
T Consensus 66 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~----~~G~~aey~~v~~~~~~ 111 (346)
T 3fbg_A 66 DAIGVVESVGNEVT---------MFNQGDIVYYSGSPD----QNGSNAEYQLINERLVA 111 (346)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECCCTT----SCCSSBSEEEEEGGGEE
T ss_pred ccEEEEEEeCCCCC---------cCCCCCEEEEcCCCC----CCcceeEEEEEChHHeE
Confidence 57899999999864 589999999743110 012 467777765543
No 50
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=79.81 E-value=0.91 Score=33.99 Aligned_cols=42 Identities=21% Similarity=0.351 Sum_probs=28.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc-CCCceEEEECCEEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP-KFGGTKIEVEGQELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~-~y~g~~v~~~g~~y~iv~~~DI 103 (111)
...|+|+++|++.. .+++||+|.+. ...|. =-+|+.++++.+
T Consensus 64 E~~G~V~~vG~~v~---------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~ 106 (327)
T 1qor_A 64 EAAGIVSKVGSGVK---------HIKAGDRVVYAQSALGA-----YSSVHNIIADKA 106 (327)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEECCCCCce-----eeeEEEecHHHc
Confidence 57899999999864 58999999653 11110 047777777654
No 51
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=79.76 E-value=0.9 Score=34.76 Aligned_cols=24 Identities=29% Similarity=0.410 Sum_probs=20.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
...|+|+++|++.. .+++||+|..
T Consensus 80 E~~G~V~~vG~~v~---------~~~vGdrV~~ 103 (359)
T 1h2b_A 80 ENVGYIEEVAEGVE---------GLEKGDPVIL 103 (359)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEe
Confidence 46799999999864 5899999964
No 52
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=79.66 E-value=1.6 Score=33.53 Aligned_cols=26 Identities=35% Similarity=0.436 Sum_probs=21.3
Q ss_pred cceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 47 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 47 k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
-...|+|+++|++.. .+++||+|...
T Consensus 68 ~e~~G~V~~vG~~v~---------~~~~GdrV~~~ 93 (371)
T 3gqv_A 68 TDYAGTVVAVGSDVT---------HIQVGDRVYGA 93 (371)
T ss_dssp SEEEEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred cccEEEEEEeCCCCC---------CCCCCCEEEEe
Confidence 357899999999874 58999999754
No 53
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=79.60 E-value=1.1 Score=34.97 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=21.9
Q ss_pred ceeeEEEEecCceeCC-CCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTP-NGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~-~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.... .+ ..+++||+|...
T Consensus 98 E~~G~V~~vG~~v~~~~~~----~~~~vGdrV~~~ 128 (404)
T 3ip1_A 98 EFSGVVVEAGPEAINRRTN----KRFEIGEPVCAE 128 (404)
T ss_dssp EEEEEEEEECTTCEETTTT----EECCTTCEEEEC
T ss_pred cceEEEEEECCCccccccC----CCCCCCCEEEEC
Confidence 4689999999987211 01 158999999974
No 54
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=79.00 E-value=1.2 Score=34.52 Aligned_cols=42 Identities=17% Similarity=0.099 Sum_probs=29.4
Q ss_pred ceeeEEEEecCce-eCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~-~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++. . .+++||+|.....++. .+|++++++.+.
T Consensus 97 e~~G~V~~vG~~v~~---------~~~vGdrV~~~~~G~~------aey~~v~~~~~~ 139 (379)
T 3iup_A 97 EGAGVVVEAGSSPAA---------QALMGKTVAAIGGAMY------SQYRCIPADQCL 139 (379)
T ss_dssp CEEEEEEEECSSHHH---------HTTTTCEEEECCSCCS------BSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCccc---------CCCCCCEEEecCCCcc------eeEEEeCHHHeE
Confidence 4689999999875 3 4789999997543221 467777766543
No 55
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=78.70 E-value=1.1 Score=33.96 Aligned_cols=46 Identities=28% Similarity=0.286 Sum_probs=30.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|++.. .+++||+|..-..+.. ..+| -+|+.++++.+.
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~g~~--~~~G~~aey~~v~~~~~~ 117 (343)
T 3gaz_A 70 DLAGTVVAVGPEVD---------SFRVGDAVFGLTGGVG--GLQGTHAQFAAVDARLLA 117 (343)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCSST--TCCCSSBSEEEEEGGGEE
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEEeCCCC--CCCcceeeEEEecHHHee
Confidence 56899999999864 5899999986321100 0122 477777776543
No 56
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=78.68 E-value=0.98 Score=34.82 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=21.0
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++.. .+++||+|...
T Consensus 82 e~~G~V~~vG~~v~---------~~~vGdrV~~~ 106 (370)
T 4ej6_A 82 EFCGIVVEAGSAVR---------DIAPGARITGD 106 (370)
T ss_dssp SEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence 46899999999864 58999999863
No 57
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=78.55 E-value=0.91 Score=34.75 Aligned_cols=42 Identities=26% Similarity=0.313 Sum_probs=29.4
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCC-CceEEEECCEEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF-GGTKIEVEGQELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y-~g~~v~~~g~~y~iv~~~DI 103 (111)
...|+|+++|++.. .+++||+|..... .|. =-+|+.++++.+
T Consensus 94 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~ 136 (351)
T 1yb5_A 94 DVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG-----YAEYALAADHTV 136 (351)
T ss_dssp CEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS-----SBSEEEEEGGGE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEeCCCCCc-----ceeEEEECHHHe
Confidence 57899999999864 5899999987542 110 146777776554
No 58
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=78.55 E-value=1.1 Score=33.98 Aligned_cols=24 Identities=33% Similarity=0.416 Sum_probs=19.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++|++ . .+++||+|...
T Consensus 66 E~~G~V~~vG~~-~---------~~~~GdrV~~~ 89 (344)
T 2h6e_A 66 ENAGTIVEVGEL-A---------KVKKGDNVVVY 89 (344)
T ss_dssp CEEEEEEEECTT-C---------CCCTTCEEEEC
T ss_pred cceEEEEEECCC-C---------CCCCCCEEEEC
Confidence 567999999987 4 58999999643
No 59
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=76.23 E-value=0.76 Score=34.89 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=29.4
Q ss_pred ceeeEEEEecCce-eCCCCeeecceeeeCCEEEccC----CCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGA-RTPNGEYIKPVVNVGDKVLLPK----FGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~-~~~~G~~~p~~vk~GD~Vl~~~----y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++. . .+++||+|.... +++ =-+|+.++++.+.
T Consensus 86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~g~~~~G~------~aey~~v~~~~~~ 132 (349)
T 3pi7_A 86 EGVGTIVAGGDEPYA---------KSLVGKRVAFATGLSNWGS------WAEYAVAEAAACI 132 (349)
T ss_dssp EEEEEEEEECSSHHH---------HHHTTCEEEEECTTSSCCS------SBSEEEEEGGGEE
T ss_pred eEEEEEEEECCCccC---------CCCCCCEEEEeccCCCCcc------ceeeEeechHHeE
Confidence 5689999999876 4 589999999652 111 0467777766543
No 60
>3pqh_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 1.29A {Bacteriophage PHI92}
Probab=75.39 E-value=4.3 Score=28.11 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=25.6
Q ss_pred cccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEE
Q psy12951 45 QQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV 90 (111)
Q Consensus 45 ~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~ 90 (111)
.+--..|+|||+..+++ .+..+ .|+..+|.++ |..|.+
T Consensus 15 ~~~~S~gVvIa~~d~ry------R~~gL-~GEvaiY~~~-G~~I~L 52 (127)
T 3pqh_A 15 EEVDSEKVIISNNKQTY------ASFDP-NGNISVYNTQ-GMKIDM 52 (127)
T ss_dssp -----CCEEEEETTTEE------EEECT-TSCEEEEETT-SCEEEE
T ss_pred hheecccEEEEeCCccc------ccCCC-CCcEEEEcCC-CCEEEE
Confidence 34467899999997665 44457 9999999996 666655
No 61
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=75.07 E-value=2.5 Score=36.40 Aligned_cols=43 Identities=23% Similarity=0.234 Sum_probs=29.5
Q ss_pred cceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 47 EVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 47 k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
-...|+|++||++.. .+++||+|...-.++. -+|..++++.+.
T Consensus 270 ~E~aG~V~~vG~~V~---------~~~vGDrV~~~~~G~~------ae~~~v~~~~~~ 312 (795)
T 3slk_A 270 SEGAGVVVETGPGVT---------GLAPGDRVMGMIPKAF------GPLAVADHRMVT 312 (795)
T ss_dssp CCEEEEEEEECSSCC---------SSCTTCEEEECCSSCS------SSEEEEETTSEE
T ss_pred ceeEEEEEEeCCCCC---------cCCCCCEEEEEecCCC------cCEEEeehHHEE
Confidence 357899999999875 5899999986432210 256666665443
No 62
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=72.38 E-value=1.9 Score=32.32 Aligned_cols=26 Identities=27% Similarity=0.286 Sum_probs=21.6
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
...|+|+++|++.. .+++||+|....
T Consensus 60 E~~G~V~~vG~~V~---------~~~~GdrV~~~~ 85 (346)
T 4a2c_A 60 EFSGYIDAVGSGVD---------DLHPGDAVACVP 85 (346)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred EEEEEEEEECCCcc---------cccCCCeEEeee
Confidence 46799999999876 579999998654
No 63
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=74.53 E-value=0.78 Score=28.27 Aligned_cols=31 Identities=29% Similarity=0.438 Sum_probs=22.3
Q ss_pred eeeeCCEEEccCCCc------eEEEECC--EEEEEEecC
Q psy12951 71 VVNVGDKVLLPKFGG------TKIEVEG--QELHLFKEA 101 (111)
Q Consensus 71 ~vk~GD~Vl~~~y~g------~~v~~~g--~~y~iv~~~ 101 (111)
.+++||.|+|+.++- .+.+++| .+|++++-.
T Consensus 6 ~f~~GD~VVy~~hGvg~i~gIe~~~v~G~~~~y~~l~~~ 44 (70)
T 2lqk_A 6 EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFP 44 (70)
Confidence 589999999999883 2234455 578887753
No 64
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=71.92 E-value=1.7 Score=33.04 Aligned_cols=23 Identities=22% Similarity=0.127 Sum_probs=19.3
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...| |+++|++ . .+++||+|...
T Consensus 64 E~~G-V~~vG~~-~---------~~~vGdrV~~~ 86 (357)
T 2b5w_A 64 EAVG-VVVDPND-T---------ELEEGDIVVPT 86 (357)
T ss_dssp EEEE-EEEECTT-S---------SCCTTCEEEEC
T ss_pred eeEE-EEEECCC-C---------CCCCCCEEEEC
Confidence 5679 9999987 4 58999999875
No 65
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=71.18 E-value=2.3 Score=32.50 Aligned_cols=42 Identities=24% Similarity=0.147 Sum_probs=28.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DI 103 (111)
...|+|+++|++.. ..+++||+|.....++ =-+|+.++++.+
T Consensus 90 E~~G~V~~vG~~V~--------~~~~vGdrV~~~~~G~------~aey~~v~~~~~ 131 (362)
T 2c0c_A 90 EGIGEVVALGLSAS--------ARYTVGQAVAYMAPGS------FAEYTVVPASIA 131 (362)
T ss_dssp EEEEEEEEECTTGG--------GTCCTTCEEEEECSCC------SBSEEEEEGGGC
T ss_pred eeEEEEEEECCCcc--------CCCCCCCEEEEccCCc------ceeEEEEcHHHe
Confidence 56799999998753 0478999998753221 036666766544
No 66
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=70.79 E-value=3.3 Score=31.29 Aligned_cols=42 Identities=24% Similarity=0.291 Sum_probs=27.9
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
...|+|+++|++. .+++||+|......|. =-+|+.++++.+.
T Consensus 85 E~~G~V~~vG~~v----------~~~vGDrV~~~~~~G~-----~aey~~v~~~~~~ 126 (342)
T 4eye_A 85 ETAGVVRSAPEGS----------GIKPGDRVMAFNFIGG-----YAERVAVAPSNIL 126 (342)
T ss_dssp EEEEEEEECCTTS----------SCCTTCEEEEECSSCC-----SBSEEEECGGGEE
T ss_pred eEEEEEEEECCCC----------CCCCCCEEEEecCCCc-----ceEEEEEcHHHeE
Confidence 5789999999864 2789999986542220 0356666665543
No 67
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=70.72 E-value=2.3 Score=32.34 Aligned_cols=25 Identities=28% Similarity=0.399 Sum_probs=19.6
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
...|+|+++|++... .+++||+|.+
T Consensus 69 E~~G~V~~vG~~v~~--------~~~~GdrV~~ 93 (360)
T 1piw_A 69 EIVGKVVKLGPKSNS--------GLKVGQRVGV 93 (360)
T ss_dssp CEEEEEEEECTTCCS--------SCCTTCEEEE
T ss_pred CceEEEEEeCCCCCC--------CCCCCCEEEE
Confidence 468999999987531 3789999954
No 68
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=64.21 E-value=1.1 Score=30.93 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=24.7
Q ss_pred cceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCC
Q psy12951 35 KGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 83 (111)
Q Consensus 35 ~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y 83 (111)
..||-||..+.+....|+-|+.. ++++||.|.|...
T Consensus 44 ~~Gi~lPr~s~~q~~~g~~V~~~-------------~l~pGDLvFf~~~ 79 (135)
T 2k1g_A 44 QFGLELPRSTYEQQEMGKSVSRS-------------NLRTGDLVLFRAG 79 (135)
T ss_dssp TTCCCCCSSHHHHGGGSEEECGG-------------GCCTTEEEEEEET
T ss_pred cCCCCCCCCHHHHhhCCcEecHH-------------HccCCcEEEECCC
Confidence 35888998776555555544322 6899999999753
No 69
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=61.45 E-value=16 Score=23.05 Aligned_cols=42 Identities=21% Similarity=0.208 Sum_probs=29.3
Q ss_pred eEEEEecCceeC---CCCeeecceeeeCCEEEccCCCceEEEECC
Q psy12951 51 AVVVAVGPGART---PNGEYIKPVVNVGDKVLLPKFGGTKIEVEG 92 (111)
Q Consensus 51 G~VvaVG~G~~~---~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g 92 (111)
-.++.++.|... ++|+.....+++||.+.++.-..-.+...|
T Consensus 39 ~~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g 83 (98)
T 2ozi_A 39 YVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNES 83 (98)
T ss_dssp EEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEECS
T ss_pred EEEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEECC
Confidence 366777888754 477645668999999999886555565544
No 70
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=60.40 E-value=17 Score=27.61 Aligned_cols=51 Identities=18% Similarity=0.313 Sum_probs=40.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC---EEEEEEec
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFKE 100 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g---~~y~iv~~ 100 (111)
...|.-|==|.|....+|+.. .|+.||.+.++.|-...+..-| -+|++.++
T Consensus 207 ~eh~~~vL~G~g~y~l~~~~~--~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 207 NQHGLLLLEGQGIYRLGDNWY--PVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp CCEEEEEEECEEEEEETTEEE--EEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred cceEEEEEeceEEEEECCEEE--EecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 447888888999988888755 6999999999999999887743 47777653
No 71
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=56.93 E-value=14 Score=24.71 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=23.1
Q ss_pred CCCeeecceeeeCCEEEccC-CCceEEEECC-EEEEEEe
Q psy12951 63 PNGEYIKPVVNVGDKVLLPK-FGGTKIEVEG-QELHLFK 99 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~-y~g~~v~~~g-~~y~iv~ 99 (111)
++|+ +..++.||.++|+. +.|+--..+. .|+.++.
T Consensus 77 ddG~--~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~~ 113 (116)
T 3es4_A 77 ADAD--PVKIGPGSIVSIAKGVPSRLEILSSFRKLATVI 113 (116)
T ss_dssp TTCC--CEEECTTEEEEECTTCCEEEEECSCEEEEEEEE
T ss_pred CCCe--EEEECCCCEEEECCCCeEEEEEeEEEeEEEEEe
Confidence 4565 56899999999999 7775433332 3455443
No 72
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=55.23 E-value=36 Score=22.29 Aligned_cols=29 Identities=24% Similarity=0.373 Sum_probs=21.0
Q ss_pred eeeeCCEEEccCCC---ceEEEECCEEEEEEecCc
Q psy12951 71 VVNVGDKVLLPKFG---GTKIEVEGQELHLFKEAD 102 (111)
Q Consensus 71 ~vk~GD~Vl~~~y~---g~~v~~~g~~y~iv~~~D 102 (111)
-|.+||.+..++.. |..|+++ -+++..++
T Consensus 13 kV~~Gd~i~vekl~~~~G~~v~~~---VLlv~~~~ 44 (101)
T 3v2d_V 13 RVEPGLKLRVEKLDAEPGATVELP---VLLLGGEK 44 (101)
T ss_dssp EECTTCEEEESCCSCCTTCEEEEC---EEEEESSS
T ss_pred EEeCCCEEEECCcCCCCCCEEEEE---EEEECCCc
Confidence 68899999888754 7888887 44455544
No 73
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=55.01 E-value=23 Score=26.37 Aligned_cols=50 Identities=22% Similarity=0.312 Sum_probs=38.8
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC---EEEEEEe
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFK 99 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g---~~y~iv~ 99 (111)
..++..+==|.+....+|+.. .|++||.+.++.+....+...| -.|+++.
T Consensus 212 ~e~~~~il~G~~~~~~~~~~~--~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~ 264 (278)
T 1sq4_A 212 MEHGLYVLEGKAVYRLNQDWV--EVEAGDFMWLRAFCPQACYSGGPGRFRYLLYK 264 (278)
T ss_dssp EEEEEEEEECEEEEEETTEEE--EEETTCEEEEEESCCEEEECCSSSCEEEEEEE
T ss_pred ccEEEEEEeCEEEEEECCEEE--EeCCCCEEEECCCCCEEEEcCCCCCEEEEEEE
Confidence 446777777888877777664 6999999999999998887733 3777775
No 74
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=52.70 E-value=7.1 Score=29.93 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=20.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEcc
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLP 81 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~ 81 (111)
...|+|+++| +..... ....+++||+|...
T Consensus 78 E~~G~V~~vG-~V~~~~---~~~~~~vGdrV~~~ 107 (380)
T 1vj0_A 78 EGAGRVVEVN-GEKRDL---NGELLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEEEES-SCCBCT---TSCBCCTTCEEEEC
T ss_pred CcEEEEEEeC-Cccccc---cCCCCCCCCEEEEc
Confidence 5789999999 764111 00148999999874
No 75
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=52.23 E-value=2.6 Score=28.76 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=22.2
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+.+....|.-|.. .++++||.|+|..
T Consensus 67 ~Gi~lpr~s~~q~~~g~~v~~-------------~~~~pGDlvff~~ 100 (142)
T 3gt2_A 67 AGIKLPRSSGAMYRVGQKILP-------------QQARKGDLIFYGP 100 (142)
T ss_dssp TTCCCCSSHHHHTTSSEEECG-------------GGCCTTCEEEESG
T ss_pred cCCCCCCCHHHHHhhCceech-------------hhCCCCCEEEeCC
Confidence 478888876544444443321 1689999999964
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=48.72 E-value=36 Score=24.61 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=36.7
Q ss_pred eeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC---EEEEEEec
Q psy12951 49 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG---QELHLFKE 100 (111)
Q Consensus 49 ~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g---~~y~iv~~ 100 (111)
.++..|-=|.+....+|+.. .|+.||.+.|+.+....+...| -.|+++++
T Consensus 187 ee~~~vLeG~~~~~~~~~~~--~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 187 EHGLLMLEGEGLYKLEENYY--PVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp CEEEEEEECEEEEEETTEEE--EEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred eEEEEEEECEEEEEECCEEE--EcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 35666666777766677654 7999999999999988887633 36776653
No 77
>2jyx_A Lipoprotein SPR; solution structure, construct optimized, membrane, palmitate, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli K12} PDB: 2k1g_A
Probab=45.92 E-value=2.2 Score=28.93 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=22.7
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 83 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y 83 (111)
.||-||..+.+....|.-+.. ..+++||.|+|...
T Consensus 45 ~Gi~lpr~s~~q~~~g~~v~~-------------~~l~pGDLvff~~~ 79 (136)
T 2jyx_A 45 FGLELPRSTYEQQEMGKSVSR-------------SNLRTGDLVLFRAG 79 (136)
T ss_dssp TCCCCCSSHHHHGGGSEECCT-------------TTCCTTEEEEEECS
T ss_pred cCCCCCCCHHHHHhcCeEcch-------------HhCCCCCEEEECCC
Confidence 588888876544444433321 15789999999763
No 78
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=45.35 E-value=36 Score=22.98 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=19.1
Q ss_pred eCCCCeeecc-eeeeCCEEEccCCCce
Q psy12951 61 RTPNGEYIKP-VVNVGDKVLLPKFGGT 86 (111)
Q Consensus 61 ~~~~G~~~p~-~vk~GD~Vl~~~y~g~ 86 (111)
...+|..+|+ ++++||+|+=.+..|.
T Consensus 9 ~~~~G~~k~i~eL~~GD~Vla~d~~G~ 35 (145)
T 1at0_A 9 LLESGVRKPLGELSIGDRVLSMTANGQ 35 (145)
T ss_dssp EBTTSCEEEGGGCCTTCEEEEECTTSC
T ss_pred EeCCCCEeEHHHcCCCCEEEEECCCCC
Confidence 3466777777 8999999997665564
No 79
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=45.33 E-value=29 Score=27.70 Aligned_cols=46 Identities=20% Similarity=0.163 Sum_probs=32.0
Q ss_pred EecCceeCCCCeeecceeeeCCEEEccCCCceEEEECC--EEEEEEecCc
Q psy12951 55 AVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG--QELHLFKEAD 102 (111)
Q Consensus 55 aVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g--~~y~iv~~~D 102 (111)
-=|.|...-+|+.. .++.||.++.+.+.--.+...+ ++..++...|
T Consensus 321 leG~G~~~V~ge~~--~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 321 AKGQGYSIVGGKRF--DWSEHDIFCVPAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp EECCEEEEETTEEE--EECTTCEEEECTTCCEEEEECCSSCCEEEEEEES
T ss_pred EeCeEEEEECCEEE--EEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeC
Confidence 33888766677654 7999999999998877776644 4555554433
No 80
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=37.39 E-value=17 Score=26.75 Aligned_cols=44 Identities=27% Similarity=0.244 Sum_probs=27.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCC-ceEEEECC--EEEEEEecCcEE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADLL 104 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~~v~~~g--~~y~iv~~~DIl 104 (111)
...|+|+++|. + .+++||+|....+. |. ..+| .+|+.++++.+.
T Consensus 64 E~~G~V~~~Gv-----~------~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 110 (324)
T 3nx4_A 64 DFAGTVHASED-----P------RFHAGQEVLLTGWGVGE--NHWGGLAERARVKGDWLV 110 (324)
T ss_dssp EEEEEEEEESS-----T------TCCTTCEEEEECTTBTT--TBCCSSBSEEEECGGGCE
T ss_pred eeEEEEEEeCC-----C------CCCCCCEEEEcccccCC--CCCCceeeEEecCHHHcE
Confidence 46899999983 1 48999999964321 11 0112 467777766543
No 81
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=37.23 E-value=6.2 Score=29.12 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=22.1
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+.+....|.-|.. .++++||.|+|..
T Consensus 136 ~Gi~LPr~s~~q~~~g~~V~~-------------~~lqpGDLVff~~ 169 (214)
T 3pbi_A 136 VGVLIPRFSGDQYNAGRHVPP-------------AEAKRGDLIFYGP 169 (214)
T ss_dssp TTCCCCSSHHHHTTSSEEECG-------------GGCCTTCEEEESG
T ss_pred hCCCCCccHHHHHhcCeeech-------------hhCCCCCEEEecC
Confidence 478888876554444443322 1689999999964
No 82
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=35.89 E-value=14 Score=27.59 Aligned_cols=24 Identities=17% Similarity=0.076 Sum_probs=18.6
Q ss_pred ceeeEEEE--ecCceeCCCCeeecceeeeCCEEEc
Q psy12951 48 VNNAVVVA--VGPGARTPNGEYIKPVVNVGDKVLL 80 (111)
Q Consensus 48 ~~~G~Vva--VG~G~~~~~G~~~p~~vk~GD~Vl~ 80 (111)
...|.+++ ||++.. .+++||+|..
T Consensus 77 e~~G~~~~GvV~~~v~---------~~~vGdrV~~ 102 (345)
T 2j3h_A 77 PIQGYGVSRIIESGHP---------DYKKGDLLWG 102 (345)
T ss_dssp BCEEEEEEEEEEECST---------TCCTTCEEEE
T ss_pred eeecceEEEEEecCCC---------CCCCCCEEEe
Confidence 36789999 997542 5899999985
No 83
>3ne0_A Resuscitation promoting factor interacting protei; cell WALL, peptidoglycan, hydrolase; 1.00A {Mycobacterium tuberculosis} PDB: 3pbc_A 3s0q_A 2xiv_A*
Probab=34.89 E-value=8.5 Score=28.44 Aligned_cols=34 Identities=15% Similarity=0.249 Sum_probs=22.5
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+.+....|.-|... ++++||.|+|..
T Consensus 136 ~Gi~LPr~s~~q~~~g~~V~~~-------------~lqpGDLvFf~~ 169 (214)
T 3ne0_A 136 VGIKLPHYSGSQYNLGRKIPSS-------------QMRRGDVIFYGP 169 (214)
T ss_dssp TTCCCCBSHHHHHTSSEEEEGG-------------GCCTTCEEEESG
T ss_pred cCCCCCCchHHHHhcCceechh-------------hCCCCCEEEecC
Confidence 4788888765444445444322 689999999963
No 84
>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}
Probab=33.27 E-value=7.7 Score=29.64 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=22.2
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+......|.-|.. ..+++||.|+|..
T Consensus 227 ~Gi~lpr~s~~q~~~g~~v~~-------------~~~~pGDlvff~~ 260 (311)
T 3h41_A 227 HGITIPRDSGPQSRNGVAVDK-------------EHLQKGDLIFFAH 260 (311)
T ss_dssp TTCCCCSSHHHHTTSSEEECG-------------GGCCTTCEEEEEH
T ss_pred cCCCCCCCHHHHHhCCEEEcH-------------HHCCCCCEEEEec
Confidence 478888876543444544322 1689999999963
No 85
>4hpe_A Putative cell WALL hydrolase TN916-like,CTN1-ORF1; two domains protein, SLT/lysozyme-like muramidase, NLPC/P60 endopeptidase; 2.38A {Clostridium difficile}
Probab=33.03 E-value=6.4 Score=30.28 Aligned_cols=34 Identities=21% Similarity=0.422 Sum_probs=22.8
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+.+....|.-|.. ..+++||.|+|..
T Consensus 226 ~Gi~lpr~s~~q~~~g~~v~~-------------~~l~pGDLvff~~ 259 (308)
T 4hpe_A 226 AGISLPRTAQAQYDATQHLPL-------------SQAKAGDLVFFHS 259 (308)
T ss_dssp TTCCCCSSHHHHHHTSEEECG-------------GGCCTTCEEEEEC
T ss_pred cCCCCCCCHHHHHhcCeeech-------------hhCCCCCEEEEcC
Confidence 388899876554444443322 1689999999975
No 86
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=31.86 E-value=28 Score=21.61 Aligned_cols=12 Identities=25% Similarity=0.305 Sum_probs=9.7
Q ss_pred eeeeCCEEEccC
Q psy12951 71 VVNVGDKVLLPK 82 (111)
Q Consensus 71 ~vk~GD~Vl~~~ 82 (111)
++++||.|+..-
T Consensus 35 ~~~vGD~VLVH~ 46 (75)
T 2z1c_A 35 DTKPGDWVIVHT 46 (75)
T ss_dssp TCCTTCEEEEET
T ss_pred CCCCCCEEEEec
Confidence 578999999754
No 87
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=31.81 E-value=87 Score=21.04 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=31.4
Q ss_pred CCCeeecceeeeCCEEEccCCCceEEEE---CCEEEEEEecC
Q psy12951 63 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 101 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~y~g~~v~~---~g~~y~iv~~~ 101 (111)
.+|.......+.||.|-.+...-.+.++ ||..|.|+..+
T Consensus 53 ~tG~~~e~tf~s~~kve~~~ve~~~~qylY~dg~~~~fMD~e 94 (136)
T 1bkb_A 53 FDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMR 94 (136)
T ss_dssp TTCCEEEEEEETTSEEEECCCEEEEEEEEEECSSEEEEEETT
T ss_pred CCCCeEEEEEcCCCEeeeceEEEEEEEEEEecCCEEEEEeCC
Confidence 5777777789999999888877666654 88999999876
No 88
>2hbw_A NLP/P60 protein; NLP/P60 family protein, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; HET: UNL; 1.05A {Anabaena variabilis} PDB: 2evr_A 2fg0_A
Probab=31.72 E-value=6.6 Score=29.21 Aligned_cols=35 Identities=20% Similarity=0.299 Sum_probs=22.3
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccCC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKF 83 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y 83 (111)
.||-||..+.+....|.-|.. -.+++||.|+|...
T Consensus 138 ~Gi~lPr~s~~q~~~g~~v~~-------------~~l~pGDLvff~~~ 172 (235)
T 2hbw_A 138 VGIWLPRDAYQQEAFTQAITI-------------DELAPGDLVFFGTP 172 (235)
T ss_dssp TTCCCCSSHHHHHHHSEEECG-------------GGCCTTCEEEEECS
T ss_pred cCCCCCCCHHHHHHhCccccH-------------hhCCCCCEEEECCC
Confidence 588888876443333433322 15789999999853
No 89
>1b12_A Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptid processing, protein translocation; HET: 1PN; 1.95A {Escherichia coli} SCOP: b.87.1.2 PDB: 3s04_A* 1t7d_A* 3iiq_A* 1kn9_A*
Probab=31.67 E-value=79 Score=22.90 Aligned_cols=67 Identities=24% Similarity=0.213 Sum_probs=33.7
Q ss_pred eeCCeEEEEecCCCCcccceEEeccCc-----cccceeeEEEEecCceeCCCCeee-cceeeeCCEEEccCCCceEEEEC
Q psy12951 18 PLLDRILVIKDEPLTKTKGGVLIPEKA-----QQEVNNAVVVAVGPGARTPNGEYI-KPVVNVGDKVLLPKFGGTKIEVE 91 (111)
Q Consensus 18 PlgDrVLVk~~~~e~~T~gGIiLP~~~-----~~k~~~G~VvaVG~G~~~~~G~~~-p~~vk~GD~Vl~~~y~g~~v~~~ 91 (111)
.-||+|||.+. .-|+=||-.. ...+..|.||..-.... .+...+ .+.--+||+|.+.+-.| .+.+|
T Consensus 21 ~~GD~vlv~k~------~yg~r~P~~~~~l~~~~~~~rGDIvvf~~p~~-~~~~~iKRViglpGD~v~i~~~~~-~l~IN 92 (248)
T 1b12_A 21 LIGDFILVEKF------AYGIKDPIYQKTLIETGHPKRGDIVVFKYPED-PKLDYIKRAVGLPGDKVTYDPVSK-ELTIQ 92 (248)
T ss_dssp CTTEEEEEEES------EEEEECGGGSCEEEEECCCCTTCEEEEECTTC-TTSEEEEEEEECTTCEEEEETTTT-EEEEE
T ss_pred cCCCEEEEEec------ccCcccccccccccccCCCCCCcEEEEEeCCC-CCceEEEEEEeeCCCEEEEEcCce-EEEEC
Confidence 35999999875 2344333322 12356676666643110 111111 22234788888875433 45555
Q ss_pred C
Q psy12951 92 G 92 (111)
Q Consensus 92 g 92 (111)
|
T Consensus 93 G 93 (248)
T 1b12_A 93 P 93 (248)
T ss_dssp T
T ss_pred C
Confidence 5
No 90
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=30.58 E-value=79 Score=21.43 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=30.9
Q ss_pred CCCeeecceeeeCCEEEccCCCceEEEE---CCEEEEEEecC
Q psy12951 63 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 101 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~y~g~~v~~---~g~~y~iv~~~ 101 (111)
.+|.......+.||.|-.+...-.+.++ ||..|.|+..+
T Consensus 51 ~tG~~~e~tf~s~~~ve~~~ve~~~~qylY~dg~~~~fMD~e 92 (138)
T 1iz6_A 51 FDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDME 92 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEECSSEEEEECTT
T ss_pred CCCCEEEEEecCCCEEeeceEEEEEEEEEEeCCCEEEEEeCC
Confidence 4677777788999999888877666654 88899999876
No 91
>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A
Probab=30.21 E-value=13 Score=28.05 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=23.8
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+......|.-+..-.. ...+++||.|+|..
T Consensus 194 ~Gi~lpr~s~~q~~~g~~v~~~~~---------~~~~~pGDLvff~~ 231 (306)
T 3npf_A 194 HDIIIPRDASQQAYVGEHIDIAPD---------FSNVKRGDLVFFGR 231 (306)
T ss_dssp TTEECCSSHHHHTTSSEEECCCTT---------CTTCCTTCEEEEEE
T ss_pred cCCcCCCCHHHHHhCCcEecccCc---------cccCCCccEEEECC
Confidence 488899876544445554432100 01588999999986
No 92
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=29.09 E-value=39 Score=22.39 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=14.4
Q ss_pred eEEEECCEEEEEEecCc
Q psy12951 86 TKIEVEGQELHLFKEAD 102 (111)
Q Consensus 86 ~~v~~~g~~y~iv~~~D 102 (111)
.=+.++|++|+++|.+|
T Consensus 58 ~Gl~l~G~KY~~i~~d~ 74 (125)
T 1ypr_A 58 NGLHIQGQKFMLLRADD 74 (125)
T ss_dssp HCEEETTEEEEEEEECS
T ss_pred CCeEECCEEEEEEecCC
Confidence 44899999999999765
No 93
>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A
Probab=28.39 E-value=41 Score=22.28 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=15.2
Q ss_pred ceEEEECCEEEEEEecCc
Q psy12951 85 GTKIEVEGQELHLFKEAD 102 (111)
Q Consensus 85 g~~v~~~g~~y~iv~~~D 102 (111)
..=+.++|++|+++|.+|
T Consensus 59 ~~Gl~l~G~Ky~vir~d~ 76 (127)
T 3d9y_A 59 GTGIILAGQKYITIRAEG 76 (127)
T ss_dssp HHCEEETTEEEEEEEECS
T ss_pred cCCEEEcCeEEEEEEeCc
Confidence 356899999999999865
No 94
>4fdy_A Similar to lipoprotein, NLP/P60 family; SLT/lysozyme-like muramidase, NLPC/P60 LD endopeptidase, STR genomics; 2.23A {Staphylococcus aureus subsp}
Probab=27.97 E-value=8.5 Score=29.91 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=22.8
Q ss_pred ceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 36 GGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 36 gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
.||-||..+.+....|.-|.. ..+++||.|+|..
T Consensus 230 ~Gi~LPr~s~~q~~~g~~V~~-------------~~lqpGDLvff~~ 263 (313)
T 4fdy_A 230 AGISLPRVAQDQYDATQEISM-------------EEAQAGDLIFFHS 263 (313)
T ss_dssp TTCCCCSSHHHHHHHSEEECT-------------TTCCTTCEEEESS
T ss_pred hCCCCCccHHHHHhcCceech-------------hhCCCCCEEEEec
Confidence 488899876554444543322 1578999999974
No 95
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=27.22 E-value=57 Score=20.47 Aligned_cols=39 Identities=21% Similarity=0.308 Sum_probs=25.0
Q ss_pred EEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEE
Q psy12951 52 VVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV 90 (111)
Q Consensus 52 ~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~ 90 (111)
.+|--|.+...-+|+..+..+++||.++|+....-.+..
T Consensus 57 ~~Vl~G~~~l~~~~~~~~~~l~~Gd~i~ipa~~~H~~~n 95 (112)
T 2opk_A 57 VMVVSGSAGIECEGDTAPRVMRPGDWLHVPAHCRHRVAW 95 (112)
T ss_dssp EEEEESCEEEEETTCSSCEEECTTEEEEECTTCCEEEEE
T ss_pred EEEEeCeEEEEECCEEEEEEECCCCEEEECCCCcEEEEe
Confidence 344456665544444322589999999999876655544
No 96
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=26.91 E-value=1e+02 Score=22.50 Aligned_cols=42 Identities=19% Similarity=0.245 Sum_probs=29.3
Q ss_pred CceeCCCCeee--cceee-eCCEEEccCCCceEEEECCEEEEEEecCc
Q psy12951 58 PGARTPNGEYI--KPVVN-VGDKVLLPKFGGTKIEVEGQELHLFKEAD 102 (111)
Q Consensus 58 ~G~~~~~G~~~--p~~vk-~GD~Vl~~~y~g~~v~~~g~~y~iv~~~D 102 (111)
.|...-||+.+ +..++ .||.+.+ +|..+++.+++..++...+
T Consensus 134 ngtvyvNg~~i~~~~~L~~~GD~I~i---g~~~~~~~~~~l~i~~~~~ 178 (238)
T 1wv3_A 134 NTDVYINYELQEQLTNKAYIGDHIYV---EGIWLEVQADGLNVLSQNT 178 (238)
T ss_dssp TCCEEETTEECCSSEEEEETTCEEEE---TTEEEEECSSEEEEECSSC
T ss_pred CCCEEECCEEeccceeccCCcCEEEE---CCEEEEEECCEEEEEeccc
Confidence 44323466654 44799 9999998 6678888888887765544
No 97
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=26.70 E-value=77 Score=21.44 Aligned_cols=40 Identities=10% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCCeeecceeeeCCEEEccCCCceEEEE---CCEEEEEEecCc
Q psy12951 63 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEAD 102 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~y~g~~v~~---~g~~y~iv~~~D 102 (111)
.+|.......+.||.|--+...-.+.++ ||..|.||..+.
T Consensus 51 ~TG~~~e~tf~s~~kve~~~v~~~~~qyly~dg~~~~fMD~et 93 (138)
T 3cpf_A 51 FTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSG 93 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEEETTEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEeeEEEEEEEEEEEecCCEEEEEcCCC
Confidence 5677777788999999988877666544 888999998763
No 98
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=26.63 E-value=46 Score=21.93 Aligned_cols=17 Identities=12% Similarity=0.288 Sum_probs=14.3
Q ss_pred eEEEECCEEEEEEecCc
Q psy12951 86 TKIEVEGQELHLFKEAD 102 (111)
Q Consensus 86 ~~v~~~g~~y~iv~~~D 102 (111)
.=+.++|++|+++|.+|
T Consensus 58 ~Gi~l~G~KY~~i~~d~ 74 (125)
T 1acf_A 58 GGFDLAGVHYVTLRADD 74 (125)
T ss_dssp HCEEETTEEEEEEEESS
T ss_pred CCeEECCEEEEEEEecC
Confidence 44899999999999765
No 99
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=26.38 E-value=1.1e+02 Score=23.59 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=30.7
Q ss_pred ecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecC
Q psy12951 56 VGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEA 101 (111)
Q Consensus 56 VG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~ 101 (111)
=|.|...-+|+. ..++.||.+..+.+....+..+ ++..++...
T Consensus 296 ~G~g~~~v~~~~--~~~~~GD~~~vP~~~~H~~~n~-e~~~l~~~~ 338 (354)
T 2d40_A 296 EGSGQVIIGNET--FSFSAKDIFVVPTWHGVSFQTT-QDSVLFSFS 338 (354)
T ss_dssp EEEEEEEETTEE--EEEETTCEEEECTTCCEEEEEE-EEEEEEEEE
T ss_pred eCeEEEEECCEE--EEEcCCCEEEECCCCeEEEEeC-CCEEEEEEc
Confidence 377776555644 5899999999999988777654 555555543
No 100
>3t64_A Deoxyuridine 5'-triphosphate nucleotidohydrolase,; hydrolase, DUTP binding, nucleus, hydrolase-hydrolase inhibi complex; HET: DU3; 1.65A {Plasmodium falciparum 3D7} PDB: 3t6y_A* 3t70_A* 3t60_A* 2y8c_A* 1vyq_A*
Probab=25.89 E-value=43 Score=23.75 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=28.4
Q ss_pred cceEEeccCccccceeeEEEEecCceeCCC--Cee---------ecceeeeCCEE
Q psy12951 35 KGGVLIPEKAQQEVNNAVVVAVGPGARTPN--GEY---------IKPVVNVGDKV 78 (111)
Q Consensus 35 ~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~--G~~---------~p~~vk~GD~V 78 (111)
.+|++.|.|.-. ..|..++-++|..+.+ |++ .+..++.||+|
T Consensus 84 ~~~~I~PRSsla--K~gl~l~NsvGvID~dYrGei~v~l~N~~~~~~~i~~GdRI 136 (181)
T 3t64_A 84 TSFLLFPRSSIS--KTPLRLANSIGLIDAGYRGEIIAALDNTSDQEYHIKKNDKL 136 (181)
T ss_dssp ECEEEEECGGGG--GSSEEETTSSEEECTTCCSCCEEEEEECSSSCEEECTTCEE
T ss_pred ceEEEECcCchh--cCceeecccccccCCCCCcEEEEEEEECCCCCeEeCCCCeE
Confidence 357788988654 5688888888887533 443 24467777775
No 101
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=25.50 E-value=78 Score=20.29 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=21.1
Q ss_pred cCceeCCCCeeecceeeeCCEEEccCCCceEEEE
Q psy12951 57 GPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEV 90 (111)
Q Consensus 57 G~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~ 90 (111)
|.+...-+|+. ..+++||.+.++...-..++.
T Consensus 68 G~~~~~~~g~~--~~l~~GD~v~ip~g~~H~~~~ 99 (119)
T 3lwc_A 68 GRLSVSTDGET--VTAGPGEIVYMPKGETVTIRS 99 (119)
T ss_dssp EEEEEEETTEE--EEECTTCEEEECTTCEEEEEE
T ss_pred CEEEEEECCEE--EEECCCCEEEECCCCEEEEEc
Confidence 55554445543 479999999999865444443
No 102
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=25.13 E-value=2.1e+02 Score=23.29 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=21.9
Q ss_pred CCCee-ecceeeeCCEEEccCCCceEEEECCEEEE
Q psy12951 63 PNGEY-IKPVVNVGDKVLLPKFGGTKIEVEGQELH 96 (111)
Q Consensus 63 ~~G~~-~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~ 96 (111)
.+|+. ..-.|+.||..+||..-..-+....+.+.
T Consensus 362 ~~g~~~f~~~l~~GDV~v~P~G~~H~~~ag~e~~~ 396 (466)
T 3kgl_A 362 DNGDRVFDGQVSQGQLLSIPQGFSVVKRATSEQFR 396 (466)
T ss_dssp TTSCEEEEEEEETTCEEEECTTCEEEEEECSSEEE
T ss_pred CCCcEEEEeEecCCcEEEECCCCeEEEEcCCCCEE
Confidence 34443 34479999999999977655544444333
No 103
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=24.75 E-value=1.9e+02 Score=23.40 Aligned_cols=20 Identities=15% Similarity=0.117 Sum_probs=16.1
Q ss_pred eeeeCCEEEccCCCceEEEE
Q psy12951 71 VVNVGDKVLLPKFGGTKIEV 90 (111)
Q Consensus 71 ~vk~GD~Vl~~~y~g~~v~~ 90 (111)
.|+.||..+||.....-+.-
T Consensus 370 ~l~~GDv~v~P~G~~H~~~n 389 (459)
T 2e9q_A 370 EVREGQVLMIPQNFVVIKRA 389 (459)
T ss_dssp EEETTCEEEECTTCEEEEEE
T ss_pred EEeCCcEEEECCCCEEEEEe
Confidence 59999999999977655544
No 104
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=24.42 E-value=94 Score=22.37 Aligned_cols=53 Identities=17% Similarity=0.177 Sum_probs=37.9
Q ss_pred eCCeEEEEecCCCCcccceEEeccCccccceeeEEEEecCceeCCCCeeecceeeeCCE
Q psy12951 19 LLDRILVIKDEPLTKTKGGVLIPEKAQQEVNNAVVVAVGPGARTPNGEYIKPVVNVGDK 77 (111)
Q Consensus 19 lgDrVLVk~~~~e~~T~gGIiLP~~~~~k~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~ 77 (111)
-|+.-+++.-..-..-.+|.+|-+.+. .|+|+.+=..+ .+|+.+|+.|+-|-+
T Consensus 54 ~GEf~~~rfp~~~rpdvsgmiLEeg~p----eGtV~svlikR--~sgeliPlavRmgt~ 106 (185)
T 4ash_A 54 SGDFLKYYFTSAVRPDIPAMVLENGCQ----EGVVASVLVKR--ASGEMLALAVRMGSQ 106 (185)
T ss_dssp ETTEEEEEESSCSCTTSCCCEECSSCC----TTCEEEEEEEC--TTCCEEEEEEEEEEE
T ss_pred cCcEEEEEcCCCcCCCCcceEEecCCC----CCcEEEEEEec--CCCCcceeEEEecce
Confidence 566666666555555578999977763 38999888755 588999998875543
No 105
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=24.37 E-value=90 Score=24.69 Aligned_cols=47 Identities=28% Similarity=0.423 Sum_probs=33.0
Q ss_pred EEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecC
Q psy12951 52 VVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEA 101 (111)
Q Consensus 52 ~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~ 101 (111)
..|.-|.|...-+|+. ..++.||++..+.|.-.....++ +.++++.+
T Consensus 303 y~V~eG~G~~~I~~~~--~~w~~gD~fvvP~w~~h~~~n~~-~a~Lf~~~ 349 (368)
T 3nw4_A 303 FQVFEGAGAVVMNGET--TKLEKGDMFVVPSWVPWSLQAET-QFDLFRFS 349 (368)
T ss_dssp EEEEESCEEEEETTEE--EEECTTCEEEECTTCCEEEEESS-SEEEEEEE
T ss_pred EEEEeCcEEEEECCEE--EEecCCCEEEECCCCcEEEEeCC-CEEEEEEe
Confidence 4555688887666654 47999999999999877776654 34444433
No 106
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=24.15 E-value=2e+02 Score=20.55 Aligned_cols=47 Identities=15% Similarity=0.183 Sum_probs=28.9
Q ss_pred eEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCE----EEEEEe
Q psy12951 51 AVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQ----ELHLFK 99 (111)
Q Consensus 51 G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~----~y~iv~ 99 (111)
...|-=|.+...-+|+. ..+++||.+.|+...-..+...++ .|++++
T Consensus 203 ~~~Vl~G~~~~~i~~~~--~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~ 253 (261)
T 1rc6_A 203 GAYILSGQGVYNLDNNW--IPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSK 253 (261)
T ss_dssp EEEEEESEEEEESSSCE--EEEETTCEEEECSSEEEEEEEC----CEEEEEEE
T ss_pred EEEEEEeEEEEEECCEE--EEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEe
Confidence 34444555555445543 479999999999977666665433 455543
No 107
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=23.70 E-value=58 Score=25.80 Aligned_cols=41 Identities=22% Similarity=0.309 Sum_probs=29.6
Q ss_pred cCce-eCCCCeeecceeeeCCEEEccCCCceEEEECC-EEEEEEe
Q psy12951 57 GPGA-RTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEG-QELHLFK 99 (111)
Q Consensus 57 G~G~-~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g-~~y~iv~ 99 (111)
|.|. ..-+|+.. .++.||.|+.+...--.+...| +.+.++.
T Consensus 132 G~G~~~~vdG~~~--~~~~GD~v~iP~g~~H~~~N~gde~l~~l~ 174 (368)
T 3nw4_A 132 GEGVWTVVNGDPV--RMSRGDLLLTPGWCFHGHMNDTDQPMAWID 174 (368)
T ss_dssp CEEEEEEETTEEE--EEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred cceEEEEECCEEE--EEeCCCEEEECCCCcEEeEeCCCCCeEEEE
Confidence 6663 44577654 6899999999998888887754 4555554
No 108
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=23.49 E-value=1.6e+02 Score=19.13 Aligned_cols=21 Identities=33% Similarity=0.499 Sum_probs=14.0
Q ss_pred eeeeCCEEEccCCC---ceEEEEC
Q psy12951 71 VVNVGDKVLLPKFG---GTKIEVE 91 (111)
Q Consensus 71 ~vk~GD~Vl~~~y~---g~~v~~~ 91 (111)
-|.+||.+..++.. |..|+++
T Consensus 13 kV~~Gd~i~vekl~~~~G~~v~~~ 36 (103)
T 3r8s_R 13 RVSEGQTVRLEKLDIATGETVEFA 36 (103)
T ss_dssp EEETTCEEEESCCCSCTTCEEEEC
T ss_pred EEeCCCEEEECCcCCCCCCEEEEe
Confidence 57777777776643 5667665
No 109
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=23.41 E-value=40 Score=24.85 Aligned_cols=43 Identities=21% Similarity=0.256 Sum_probs=26.1
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCC-ceEEEECC--EEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~~v~~~g--~~y~iv~~~DI 103 (111)
...|+|+++|. + .+++||+|....+. |. ..+| -+|+.++++.+
T Consensus 68 E~~G~V~~~~v-----~------~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~ 113 (330)
T 1tt7_A 68 DAAGTVVSSND-----P------RFAEGDEVIATSYELGV--SRDGGLSEYASVPGDWL 113 (330)
T ss_dssp EEEEEEEECSS-----T------TCCTTCEEEEESTTBTT--TBCCSSBSSEEECGGGE
T ss_pred eEEEEEEEcCC-----C------CCCCCCEEEEcccccCC--CCCccceeEEEecHHHe
Confidence 46799999753 1 48999999865321 11 0112 46777776554
No 110
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=23.32 E-value=99 Score=20.11 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=17.7
Q ss_pred cCceeCC-CCeeecceeeeCCEEEccCCC
Q psy12951 57 GPGARTP-NGEYIKPVVNVGDKVLLPKFG 84 (111)
Q Consensus 57 G~G~~~~-~G~~~p~~vk~GD~Vl~~~y~ 84 (111)
|...... +|+ +..+++||.++|+.-.
T Consensus 77 G~~~l~~~~g~--~~~l~~GD~~~ip~g~ 103 (123)
T 3bcw_A 77 GEARLVDPDGT--VHAVKAGDAFIMPEGY 103 (123)
T ss_dssp EEEEEECTTCC--EEEEETTCEEEECTTC
T ss_pred EEEEEEECCCe--EEEECCCCEEEECCCC
Confidence 4444333 554 3579999999999844
No 111
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=23.28 E-value=89 Score=26.39 Aligned_cols=69 Identities=12% Similarity=0.031 Sum_probs=43.3
Q ss_pred cceeeeCCeEEEEecCCCCcccceEEeccCccccc------eeeEEEEecCceeCCCCeeecceeeeCCEEEccC
Q psy12951 14 QKFRPLLDRILVIKDEPLTKTKGGVLIPEKAQQEV------NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPK 82 (111)
Q Consensus 14 ~~i~PlgDrVLVk~~~~e~~T~gGIiLP~~~~~k~------~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 82 (111)
..--.+|+.+||.++-.+..+.--++||+..--.. ..|++..-|.-...-.=..+|+-||.|-.|-..+
T Consensus 546 ~dQfm~G~~LLVaPV~~~g~~~~~vYLP~g~W~d~~~~~~~~t~~~~~gG~~~v~apl~~iPvfvR~GsIiP~~~ 620 (666)
T 3nsx_A 546 EDQLMLGNEIMIAPVYEQNARGRYVYLPEEMKFIKFMPDGSISEEVLEKGVHYVDVALNEVPLFIRSGKCIPVAE 620 (666)
T ss_dssp CSCEEETTTEEECCCCSTTCSEEEEEESSCEEEEEECTTSCEEEEEECSEEEEEECCTTCEEEEEETTCEEEECC
T ss_pred hhhheeccceEEeeeeeecccceEEEcchheEEEEEecCCceeEEEecCCceeEEeecceeeEEEEcCceeeecc
Confidence 34457999999999977777777899998631111 3455543221111111134788999999887765
No 112
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=22.07 E-value=46 Score=24.46 Aligned_cols=43 Identities=23% Similarity=0.217 Sum_probs=26.5
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCC-ceEEEECC--EEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG-GTKIEVEG--QELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~~v~~~g--~~y~iv~~~DI 103 (111)
...|+|+++|. . .+++||+|....+. |.. .+| -+|++++++.+
T Consensus 67 E~~G~V~~~~v--~---------~~~vGdrV~~~~~~~g~~--~~G~~aey~~v~~~~~ 112 (328)
T 1xa0_A 67 DLAGVVVSSQH--P---------RFREGDEVIATGYEIGVT--HFGGYSEYARLHGEWL 112 (328)
T ss_dssp EEEEEEEECCS--S---------SCCTTCEEEEESTTBTTT--BCCSSBSEEEECGGGC
T ss_pred ceEEEEEecCC--C---------CCCCCCEEEEccccCCCC--CCccceeEEEechHHe
Confidence 56799999652 1 48999999865321 110 112 47777776554
No 113
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=21.87 E-value=50 Score=24.33 Aligned_cols=37 Identities=16% Similarity=0.075 Sum_probs=24.2
Q ss_pred eeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcEE
Q psy12951 49 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADLL 104 (111)
Q Consensus 49 ~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DIl 104 (111)
..|+|++.| .. .+++||+|.... + =.+|++++++.+.
T Consensus 78 ~~G~V~~~~--v~---------~~~vGdrV~~~G--~------~aey~~v~~~~~~ 114 (336)
T 4b7c_A 78 GVGKVLVSK--HP---------GFQAGDYVNGAL--G------VQDYFIGEPKGFY 114 (336)
T ss_dssp EEEEEEEEC--ST---------TCCTTCEEEEEC--C------SBSEEEECCTTCE
T ss_pred eEEEEEecC--CC---------CCCCCCEEeccC--C------ceEEEEechHHeE
Confidence 579999854 21 489999998642 1 1467777766543
No 114
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=21.79 E-value=98 Score=22.04 Aligned_cols=39 Identities=18% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCCeeecceeeeCCEEEccCCCceEEEE---CCEEEEEEecC
Q psy12951 63 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 101 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~y~g~~v~~---~g~~y~iv~~~ 101 (111)
.+|.......+.||.|--....-.+.++ ||+.|.||..+
T Consensus 45 ~TG~~~e~tf~s~~kve~~~ver~~~qylY~dgd~~~FMD~e 86 (184)
T 1ueb_A 45 ETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLE 86 (184)
T ss_dssp SSSCEEEEEEETTCEEEECCEEEEEEEEEEEETTEEEEEETT
T ss_pred CCCCEEEEEECCCCEEEeeeEEEEEEEEEEeCCCEEEEeeCC
Confidence 4677777788999999888876666544 78899999875
No 115
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=21.75 E-value=63 Score=18.26 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=17.6
Q ss_pred EEccCCCceEEEECCEEEEEEecCcEEEEeecC
Q psy12951 78 VLLPKFGGTKIEVEGQELHLFKEADLLAVIEKD 110 (111)
Q Consensus 78 Vl~~~y~g~~v~~~g~~y~iv~~~DIlavi~~~ 110 (111)
.+..+++|.-.++.-+.--.+...+.|+.+.++
T Consensus 38 ~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 70 (72)
T 1z6h_A 38 PIVADRSGIVKEVKKKEGDFVNEGDVLLELSNS 70 (72)
T ss_dssp EEECSSCEEEEEESSCTTCEECTTCEEEEEGGG
T ss_pred EEECCCCcEEEEEecCCCCEECCCCEEEEEeCC
Confidence 344566775544432222235667777777643
No 116
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=21.27 E-value=2.4e+02 Score=23.01 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=16.8
Q ss_pred CCCee-ecceeeeCCEEEccCCCce
Q psy12951 63 PNGEY-IKPVVNVGDKVLLPKFGGT 86 (111)
Q Consensus 63 ~~G~~-~p~~vk~GD~Vl~~~y~g~ 86 (111)
.+|+. ..-.++.||..+||.+-..
T Consensus 362 ~~g~~~f~~~l~~GDVfvvP~g~~h 386 (465)
T 3qac_A 362 DQGQSVFDEELSRGQLVVVPQNFAI 386 (465)
T ss_dssp TTSCEEEEEEEETTCEEEECTTCEE
T ss_pred CCCcEEEEEEecCCeEEEECCCcEE
Confidence 34443 3336999999999996653
No 117
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=20.75 E-value=35 Score=25.53 Aligned_cols=38 Identities=13% Similarity=-0.027 Sum_probs=24.7
Q ss_pred ceeeEEEEecCceeCCCCeeecceeeeCCEEEccCCCceEEEECCEEEEEEecCcE
Q psy12951 48 VNNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFGGTKIEVEGQELHLFKEADL 103 (111)
Q Consensus 48 ~~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~~g~~y~iv~~~DI 103 (111)
...|+|++ ++.. .+++||+|.... | .=-+|++++++.+
T Consensus 83 E~~G~V~~--~~v~---------~~~vGdrV~~~~--G-----~~aey~~v~~~~~ 120 (357)
T 2zb4_A 83 GGIGIIEE--SKHT---------NLTKGDFVTSFY--W-----PWQTKVILDGNSL 120 (357)
T ss_dssp EEEEEEEE--ECST---------TCCTTCEEEEEE--E-----ESBSEEEEEGGGC
T ss_pred cEEEEEEe--cCCC---------CCCCCCEEEecC--C-----CcEEEEEEchHHc
Confidence 45799999 4432 489999998642 1 0146777776654
No 118
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=20.66 E-value=88 Score=24.89 Aligned_cols=42 Identities=24% Similarity=0.219 Sum_probs=31.1
Q ss_pred EecCcee-CCCCeeecceeeeCCEEEccCCCceEEEE-CC-EEEEEE
Q psy12951 55 AVGPGAR-TPNGEYIKPVVNVGDKVLLPKFGGTKIEV-EG-QELHLF 98 (111)
Q Consensus 55 aVG~G~~-~~~G~~~p~~vk~GD~Vl~~~y~g~~v~~-~g-~~y~iv 98 (111)
-=|.|.. ..+|+.. .++.||.++.+....-.+.. .| +.+.++
T Consensus 150 leG~G~~t~v~G~~~--~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 150 MEGSGAYTIVDGHKV--ELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp EECSCEEEEETTEEE--EECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred EEeeEEEEEECCEEE--EEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 3388854 5677764 69999999999988888877 44 455555
No 119
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=20.29 E-value=94 Score=22.83 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCCeeecceeeeCCEEEccCCCceEEEE---CCEEEEEEecC
Q psy12951 63 PNGEYIKPVVNVGDKVLLPKFGGTKIEV---EGQELHLFKEA 101 (111)
Q Consensus 63 ~~G~~~p~~vk~GD~Vl~~~y~g~~v~~---~g~~y~iv~~~ 101 (111)
.+|.......+.||+|--....-.+.+| ||+.|.||..+
T Consensus 75 ~TG~~~e~tf~s~ekve~a~verr~~QylY~Dgd~y~FMD~E 116 (215)
T 1yby_A 75 VTGATIEKTFNPTDKMPKAHIERKDMQYLYNDGDLYYFMDTE 116 (215)
T ss_dssp TTCCEEEEEECTTCEECBCCCEEEEEEEEEEETTEEEEECTT
T ss_pred CCCCEEEEEECCCCEEecceEEEEEEEEEEeCCCEEEEccCC
Confidence 5677777788999998887776666544 88899999875
No 120
>2kd2_A FAS apoptotic inhibitory molecule 1; protein, beta sandwich, apoptosis; NMR {Mus musculus} PDB: 2kw1_A
Probab=20.19 E-value=74 Score=20.71 Aligned_cols=28 Identities=18% Similarity=0.283 Sum_probs=23.0
Q ss_pred CCceEEEECCEEEEEEecCcEEEEeecC
Q psy12951 83 FGGTKIEVEGQELHLFKEADLLAVIEKD 110 (111)
Q Consensus 83 y~g~~v~~~g~~y~iv~~~DIlavi~~~ 110 (111)
|.-..++++|++|.++=++|-|-++.++
T Consensus 12 ~~tW~~~~~G~~~RIvLeK~tmdVwvNG 39 (94)
T 2kd2_A 12 TSTWVLRLDGEDLRVVLEKDTMDVWCNG 39 (94)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEESS
T ss_pred eeEEEEEeCCCEEEEEEecCcEEEEECC
Confidence 4456788999999999999988888765
No 121
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=20.04 E-value=2.2e+02 Score=19.44 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=22.3
Q ss_pred eeeEEEEecCceeCCCCeeecceeeeCCEEEccCCC
Q psy12951 49 NNAVVVAVGPGARTPNGEYIKPVVNVGDKVLLPKFG 84 (111)
Q Consensus 49 ~~G~VvaVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~ 84 (111)
..+.|++ |......+|+ ...+++||.++|+.-.
T Consensus 86 E~~yVLe-G~~~l~i~g~--~~~l~~GD~i~iP~G~ 118 (151)
T 4axo_A 86 EIDYVID-GTLDIIIDGR--KVSASSGELIFIPKGS 118 (151)
T ss_dssp EEEEEEE-EEEEEEETTE--EEEEETTCEEEECTTC
T ss_pred EEEEEEE-eEEEEEECCE--EEEEcCCCEEEECCCC
Confidence 3445554 6555555664 3579999999999854
Done!