RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12957
(274 letters)
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase;
HET: TFC; 2.70A {Trichoplusia NI}
Length = 551
Score = 328 bits (844), Expect = e-110
Identities = 84/248 (33%), Positives = 120/248 (48%), Gaps = 34/248 (13%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
+VF+HGGGF G S+++GPEY + +V+++T YRL V GFLS
Sbjct: 118 LVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVY-------------GFLSLN 164
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGKFE 120
+ VPGN G++D V L+W+Q N FGG PD VT+ G+SAGAA+ +S + G
Sbjct: 165 STSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADG--- 221
Query: 121 SRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCL 180
LF RAIL SGT+S ++ +T A+ F T +G E + L
Sbjct: 222 -----------LFRRAILMSGTSSSAFFTTNPVFAQYINKLFVTNIGITATDPEEIHQKL 270
Query: 181 RQLPTETFVTTLNKFHIWFKNPMITFAPVIESPL-SQNNFLPDHPLRL----PHADVPII 235
++P E F + TF PV+ESP+ L P +L +P+I
Sbjct: 271 IEMPAEKLNEANRFLLEQF--GLTTFFPVVESPINGVTTILDGDPEQLIAKGRGKHIPLI 328
Query: 236 IGVNNKEG 243
IG + E
Sbjct: 329 IGFTDAEC 336
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A
{Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A
1jmy_A
Length = 579
Score = 308 bits (791), Expect = e-102
Identities = 93/271 (34%), Positives = 128/271 (47%), Gaps = 46/271 (16%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMD-------HNVVLVTIQYRLGVLAENSPDSIGIIT 53
M++++GG FLMG + + Y D NV++VT YR+G L
Sbjct: 101 MIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPL------------ 148
Query: 54 RGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 113
GFLS G++ +PGN G+ DQ +A+ W++ NIE FGG+PD +T+FGESAG ASVS +SP
Sbjct: 149 -GFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSP 207
Query: 114 LSKGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPI 173
+KG L RAI QSG C WA A A VGCP
Sbjct: 208 YNKG--------------LIKRAISQSGVGLCPWAIQQD--PLFWAKRIAEKVGCPVDDT 251
Query: 174 ETVLDCLRQLPTETFVTTLNKFHIWFKNP---MITFAPVIESPLSQNNFLPDHPLRLPH- 229
+ CL+ + P ++F PVI+ +F+PD P+ L
Sbjct: 252 SKMAGCLKITDPRALTLAYKLPLGSTEYPKLHYLSFVPVID-----GDFIPDDPVNLYAN 306
Query: 230 -ADVPIIIGVNNKEGELSVVEAGPLESSVKK 259
ADV I G N+ +G L V P +S K+
Sbjct: 307 AADVDYIAGTNDMDGHLFVGMDVPAINSNKQ 337
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase,
neurotransmitter cleavage, catalytic triad, alpha/beta
hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP:
c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A*
1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A
1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A*
1vxr_A* ...
Length = 537
Score = 303 bits (777), Expect = e-100
Identities = 88/258 (34%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFM-DHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
MV+++GGGF G +T ++Y +Y VVLV++ YR+G GFL+
Sbjct: 112 MVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAF-------------GFLAL 158
Query: 60 -GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGK 118
G+ E PGN+G+ DQ +ALQW+ +NI+ FGG+P +VTIFGESAG ASV H++SP S+
Sbjct: 159 HGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRD- 217
Query: 119 FESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLD 178
LF RAILQSG+ +C WAS R RA + C E ++
Sbjct: 218 -------------LFRRAILQSGSPNCPWASVSVAEGRRRAVELGRNLNCNLNSDEELIH 264
Query: 179 CLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL----PHADVPI 234
CLR+ + + + +F PVI+ F P + I
Sbjct: 265 CLREKKPQELIDVEWNVLPFDSIFRFSFVPVID-----GEFFPTSLESMLNSGNFKKTQI 319
Query: 235 IIGVNNKEGELSVVEAGP 252
++GVN EG ++ P
Sbjct: 320 LLGVNKDEGSFFLLYGAP 337
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC
MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A*
1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A*
3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A*
2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Length = 529
Score = 302 bits (775), Expect = e-100
Identities = 93/258 (36%), Positives = 133/258 (51%), Gaps = 38/258 (14%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-NVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+++++GGGF G ++ ++Y ++ V++V++ YR+G L GFL+
Sbjct: 110 LIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGAL-------------GFLAL 156
Query: 60 -GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGK 118
GN E PGN+G+ DQ LALQW+Q+NI FGGNP SVT+FGESAGAASVS HL+SP S
Sbjct: 157 PGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHS- 215
Query: 119 FESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLD 178
LF RAILQSG+ + WA T + AR+R A L GC + ++
Sbjct: 216 -------------LFTRAILQSGSFNAPWAVTSLYEARNRTLNLAKLTGCSRENETEIIK 262
Query: 179 CLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL----PHADVPI 234
CLR + + + + F P ++ +FL D P L I
Sbjct: 263 CLRNKDPQEILLNEAFVVPYGTPLSVNFGPTVD-----GDFLTDMPDILLELGQFKKTQI 317
Query: 235 IIGVNNKEGELSVVEAGP 252
++GVN EG +V P
Sbjct: 318 LVGVNKDEGTAFLVYGAP 335
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase;
HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP:
c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A*
1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A*
2hrq_A* 3k9b_A* 1k4y_A*
Length = 542
Score = 298 bits (765), Expect = 9e-99
Identities = 92/269 (34%), Positives = 121/269 (44%), Gaps = 37/269 (13%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
MV++HGGG ++G A S G NVV+VTIQYRLG+ GF S G
Sbjct: 118 MVWIHGGGLMVGAA-STYDGLALAAHENVVVVTIQYRLGIW-------------GFFSTG 163
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGKFE 120
+ GN G DQV AL+W+Q+NI FGGNP SVTIFGESAG SVS ++SPL+K
Sbjct: 164 DEHSRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKN--- 220
Query: 121 SRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDCL 180
LFHRAI +SG A S + A A GC T ++ CL
Sbjct: 221 -----------LFHRAISESGVALTSVLVKKGD-VKPLAEQIAITAGCKTTTSAVMVHCL 268
Query: 181 RQLPTETFVTTLNKFHIW---FKNPMITFAPVIESPLSQNNFLPDHPLRL----PHADVP 233
RQ E + T K + P++ + L P L VP
Sbjct: 269 RQKTEEELLETTLKMKFLSLDLQGDPRESQPLLG-TVIDGMLLLKTPEELQAERNFHTVP 327
Query: 234 IIIGVNNKEGELSVVEAGPLESSVKKLRK 262
++G+N +E + S +L +
Sbjct: 328 YMVGINKQEFGWLIPMLMSYPLSEGQLDQ 356
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod
glycosylated protein, hydrolase; HET: NAG FUC SCK SCU
P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A*
1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A*
2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A*
2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Length = 543
Score = 295 bits (757), Expect = 1e-97
Identities = 96/262 (36%), Positives = 133/262 (50%), Gaps = 42/262 (16%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-NVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+++++GGGF G A+ ++Y + VLV++ YR+G GFL+
Sbjct: 115 LIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTF-------------GFLAL 161
Query: 60 -GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGK 118
G+ E PGN+G+ DQ LALQW+QENI FGG+P SVT+FGESAGAASV H++S S+
Sbjct: 162 PGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS- 220
Query: 119 FESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIET--- 175
LFHRA+LQSGT + WA+ A AR RA A LVGCP
Sbjct: 221 -------------LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDT 267
Query: 176 -VLDCLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL----PHA 230
++ CLR P + V +F PV++ +FL D P L
Sbjct: 268 ELIACLRTRPAQDLVDHEWHVLPQESIFRFSFVPVVD-----GDFLSDTPEALINTGDFQ 322
Query: 231 DVPIIIGVNNKEGELSVVEAGP 252
D+ +++GV EG +V P
Sbjct: 323 DLQVLVGVVKDEGSYFLVYGVP 344
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase,
cell adhesion, cell J glycoprotein, membrane,
postsynaptic cell membrane; HET: NAG; 1.80A {Rattus
norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A*
2vh8_A 3bl8_A*
Length = 574
Score = 287 bits (736), Expect = 4e-94
Identities = 86/272 (31%), Positives = 124/272 (45%), Gaps = 44/272 (16%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-NVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
MV++HGG ++ G T N+Y + NV+++T+ YRLGVL GFLS
Sbjct: 134 MVYIHGGSYMEG--TGNLYDGSVLASYGNVIVITVNYRLGVL-------------GFLST 178
Query: 60 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGKF 119
G+ GN G+ D + AL+W ENI FGG+P +T+FG AG + V+ +S S
Sbjct: 179 GDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYS---- 234
Query: 120 ESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVLDC 179
+G LF RAI QSGTA SWA + A AT VGC +++C
Sbjct: 235 -EKG--------LFQRAIAQSGTALSSWAVSFQ--PAKYARILATKVGCNVSDTVELVEC 283
Query: 180 LRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL----PHADVPII 235
L++ P + V + + I F PVI+ + +PD P L + I+
Sbjct: 284 LQKKPYKELVDQDVQPARYH----IAFGPVID-----GDVIPDDPQILMEQGEFLNYDIM 334
Query: 236 IGVNNKEGELSVVEAGPLESSVKKLRKISKLQ 267
+GVN EG V + V +
Sbjct: 335 LGVNQGEGLKFVENIVDSDDGVSASDFDFAVS 366
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse,
membrane, nerve, muscle neurotransmitter degradation,
glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila
melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Length = 585
Score = 281 bits (720), Expect = 1e-91
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 50/281 (17%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-NVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+++++GGGF+ G AT ++Y + NV++ + QYR+G GFL
Sbjct: 144 LIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAF-------------GFLHL 190
Query: 60 -------GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 112
E PGN+G+ DQ LA++W+++N FGGNP+ +T+FGESAG++SV+ L+S
Sbjct: 191 APEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMS 250
Query: 113 PLSKGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQP 172
P+++G L R ++QSGT + W+ + A + A C
Sbjct: 251 PVTRG--------------LVKRGMMQSGTMNAPWSHMTSEKAVEIGKALINDCNCNASM 296
Query: 173 IET----VLDCLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL- 227
++T V+ C+R + +T + +++ + AP I+ FLP P+ L
Sbjct: 297 LKTNPAHVMSCMRSVDAKTIS--VQQWNSYSGILSFPSAPTID-----GAFLPADPMTLM 349
Query: 228 ---PHADVPIIIGVNNKEGELSVVEAGPLESSVKKLRKISK 265
D I++G EG ++ + +
Sbjct: 350 KTADLKDYDILMGNVRDEGTYFLLYDFIDYFDKDDATALPR 390
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase
directed evolution; 1.50A {Bacillus subtilis} SCOP:
c.69.1.1 PDB: 1c7j_A 1c7i_A
Length = 489
Score = 262 bits (672), Expect = 2e-85
Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 49/264 (18%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYF-MDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
MV++HGG F +G + +Y V++VT+ YRLG GFL
Sbjct: 100 MVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPF-------------GFLHL 146
Query: 60 --GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKG 117
+ NLG+ DQ AL+W++ENI FGG+PD+VT+FGESAG S++ L P +KG
Sbjct: 147 SSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKG 206
Query: 118 KFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIETVL 177
LF +AI++SG + A A AF ++G + L
Sbjct: 207 --------------LFQKAIMESGASRTMTKEQ----AASTAAAFLQVLGINE----SQL 244
Query: 178 DCLRQLPTETFVTTLNKFHIW--FKNPMITFAPVIESPLSQNNFLPDHPLRL----PHAD 231
D L + E + ++ I + F P ++ LP+ P + +
Sbjct: 245 DRLHTVAAEDLLKAADQLRIAEKENIFQLFFQPALD-----PKTLPEEPEKSIAEGAASG 299
Query: 232 VPIIIGVNNKEGELSVVEAGPLES 255
+P++IG EG L + S
Sbjct: 300 IPLLIGTTRDEGYLFFTPDSDVHS 323
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase,
hydrolase; 1.58A {Geobacillus stearothermophilus} PDB:
2ogs_A
Length = 498
Score = 258 bits (662), Expect = 9e-84
Identities = 82/265 (30%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFM-DHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+ ++HGG FL G +S Y F +VV+VTI YR+ V GFL
Sbjct: 102 LFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVF-------------GFLHL 148
Query: 60 G-----NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPL 114
G GNLG+ DQV AL+W++ENI FGG+PD++TIFGESAGAASV L P
Sbjct: 149 GDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPE 208
Query: 115 SKGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIE 174
+ G LF RA+LQSG+ S S A G
Sbjct: 209 ASG--------------LFRRAMLQSGSGSLLLRSPET--AMAMTERILDKAGIRP---- 248
Query: 175 TVLDCLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLPDHPLRL----PHA 230
+ L +P E + P + + PV++ L HP+ +
Sbjct: 249 GDRERLLSIPAEELLRAALSL-----GPGVMYGPVVD-----GRVLRRHPIEALRYGAAS 298
Query: 231 DVPIIIGVNNKEGELSVVEAGPLES 255
+PI+IGV E L +
Sbjct: 299 GIPILIGVTKDEYNLFTLTDPSWTK 323
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A
{Galactomyces geotrichum} SCOP: c.69.1.17
Length = 544
Score = 242 bits (620), Expect = 4e-77
Identities = 78/260 (30%), Positives = 108/260 (41%), Gaps = 46/260 (17%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYF------MDHNVVLVTIQYRLGVLAENSPDSIGIITR 54
MV+++GG F+ G +S Y + M VV V+I YR G
Sbjct: 125 MVWIYGGAFVYG--SSAAYPGNSYVKESINMGQPVVFVSINYRTGPF------------- 169
Query: 55 GFLSFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 112
GFL AE N G+ DQ L+W+ +NI FGG+PD V IFGESAGA SV++ L++
Sbjct: 170 GFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIA 229
Query: 113 PLSKGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQP 172
+ + LFH AILQSG + + + + FA GC T
Sbjct: 230 YGGDNTYNGKK--------LFHSAILQSGGPL-PYHDSSSVGPDISYNRFAQYAGCDTSA 280
Query: 173 -IETVLDCLRQLPTETFVTTLNKFHI----WFKNPMITFAPVIESPLSQNNFLPDHPLRL 227
L+CLR + N + + + F P + N +PD L
Sbjct: 281 SANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPD-----GNIIPDAAYEL 335
Query: 228 ----PHADVPIIIGVNNKEG 243
+A VP I G EG
Sbjct: 336 FRSGRYAKVPYISGNQEDEG 355
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H;
HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Length = 522
Score = 239 bits (612), Expect = 4e-76
Identities = 66/256 (25%), Positives = 101/256 (39%), Gaps = 50/256 (19%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFM---DHNVVLVTIQYRLGVLAENSPDSIGIITRGFL 57
+F+ GGG+ ++ Y + D +V VT YR+G L GFL
Sbjct: 105 WLFIQGGGYAEN--SNANYNGTQVIQASDDVIVFVTFNYRVGAL-------------GFL 149
Query: 58 SFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLS 115
+ N G+ DQ AL+W+++ IE+FGG+PD + I G SAGA SV+YHL +
Sbjct: 150 ASEKVRQNGDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGG 209
Query: 116 KGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQPIET 175
K + LF AI++S + + F GC +
Sbjct: 210 KDE------------GLFIGAIVESSFWPTQRTVSE---MEFQFERFVNDTGCSSAR--D 252
Query: 176 VLDCLRQLPTETFVTTLNKFHIWFKN----PMITFAPVIESPLSQNNFLPDHPLRL---- 227
L+CLR+ T + P F PV + + +PD
Sbjct: 253 SLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTD-----GSLVPDELYNAFDAG 307
Query: 228 PHADVPIIIGVNNKEG 243
VP+++G + EG
Sbjct: 308 NFIKVPVLVGDDTDEG 323
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester
acylh hydrolase; HET: NAG F23; 1.40A {Candida
cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A*
1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A*
1gz7_A*
Length = 534
Score = 236 bits (605), Expect = 6e-75
Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 45/257 (17%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH------NVVLVTIQYRLGVLAENSPDSIGIITR 54
M+++ GGGF +G + ++ P + ++ V + YR+
Sbjct: 117 MLWIFGGGFEIG--SPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASW------------- 161
Query: 55 GFLSFG--NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVS 112
GFL+ AE GN G+KDQ L +QW+ +NI FGG+P VTIFGESAG+ SV HL+
Sbjct: 162 GFLAGDDIKAEGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIW 221
Query: 113 PLSKGKFESRGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFATLVGCPTQP 172
++ + LF I+QSG S + + F + GC +
Sbjct: 222 NDGDNTYKGKP--------LFRAGIMQSGAMVPSDPVDGTY-GNEIYDLFVSSAGCGSAS 272
Query: 173 IETVLDCLRQLPTETFVTTLNKFHIWFKNPMIT--FAPVIESPLSQNNFLPDHPLRL--- 227
L CLR ++T + N + + + P + + D +L
Sbjct: 273 --DKLACLRSASSDTLLDATNNTPGFLAYSSLRLSYLPRPD-----GKNITDDMYKLVRD 325
Query: 228 -PHADVPIIIGVNNKEG 243
+A VP+IIG N EG
Sbjct: 326 GKYASVPVIIGDQNDEG 342
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 56.6 bits (136), Expect = 3e-09
Identities = 55/305 (18%), Positives = 92/305 (30%), Gaps = 108/305 (35%)
Query: 12 GQATSNMYGPE----YFMDHNVV---LVTIQYRLGVLAENSPDSIGIITRGFLSFGNAEV 64
GQ ++ Y E Y H +V + L L + D+ + T+G
Sbjct: 162 GQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGL-------- 213
Query: 65 PGNLGMKDQVLALQWIQENIEEFGGNPDSV--TIFGESAGAASVSYHLVSPLSKGKFE-- 120
N+ L+W++ NP + + S +S L+ + +
Sbjct: 214 --NI--------LEWLE--------NPSNTPDKDYLLS---IPISCPLIGVIQLAHYVVT 252
Query: 121 -SRGGNNHFNFRLFHRAILQSGT-------------ASCSWASTPAWLARDRAHAFATLV 166
G R+ L+ T + SW S +++ +A +
Sbjct: 253 AKLLGFTPGEL----RSYLKGATGHSQGLVTAVAIAETDSWES--FFVSVRKAITVLFFI 306
Query: 167 GCPTQ--------PIETVLDCLRQ---LPTETFVTTLNKFHIWFKNPM-----ITFAPVI 210
G P + D L +P+ PM +T V
Sbjct: 307 GVRCYEAYPNTSLPPSILEDSLENNEGVPS----------------PMLSISNLTQEQVQ 350
Query: 211 ESPLSQNNFLPDHPLRLPHADVPIIIGVNNKEGELSVVEAGP---LESSVKKLRKI---S 264
+ N+ LP A + I + N G ++V +GP L LRK S
Sbjct: 351 DYVNKTNSHLP--------AGKQVEISLVN--GAKNLVVSGPPQSLYGLNLTLRKAKAPS 400
Query: 265 KLQQS 269
L QS
Sbjct: 401 GLDQS 405
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 50.0 bits (119), Expect = 2e-07
Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 33/109 (30%)
Query: 1 MVFVHGGGFLMGQATSNMYGP------EYFMDHNVVLVTIQYRLGVLAENSPDSIGIITR 54
++++HGG + + T N + + V +I+YRL SP+
Sbjct: 44 VIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRL------SPE------- 90
Query: 55 GFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGA 103
P NL D V + + + ++ + G S GA
Sbjct: 91 -------ITNPRNL--YDAVSNITRLVKE-----KGLTNINMVGHSVGA 125
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 49.5 bits (118), Expect = 3e-07
Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 27/103 (26%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
+V++HGGG + G+A + + L+ + YRL P
Sbjct: 32 IVYIHGGGLMFGKANDLSPQYIDILTEHYDLIQLSYRL------LP-------------- 71
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGA 103
EV + ++D + IQ + + FG S+GA
Sbjct: 72 --EVSLDCIIEDVYASFDAIQSQY-----SNCPIFTFGRSSGA 107
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 49.5 bits (118), Expect = 3e-07
Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 30/114 (26%)
Query: 1 MVFVHGGGFLMGQ-ATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+V++HGGG + G + E F + ++ + Y L +P
Sbjct: 30 VVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLL------AP------------- 70
Query: 60 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVSYHL 110
+ ++ Q + E S + G SAG ++ L
Sbjct: 71 ---NTKIDHILRTLTETFQLLNEE----IIQNQSFGLCGRSAGGYLMLQLTKQL 117
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 48.3 bits (115), Expect = 8e-07
Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 25/123 (20%)
Query: 1 MVFVHGGGFLMGQATSNMYGP-EYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
++ GGG+ + F+ ++ + Y + N
Sbjct: 46 IIICPGGGYQHI-SQRESDPLALAFLAQGYQVLLLNYTVMNKGTNYN------------- 91
Query: 60 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLSKGKF 119
+++ I +N +E+ NP+ V + G SAG HL + +
Sbjct: 92 -FLSQN----LEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGG-----HLAAWYGNSEQ 141
Query: 120 ESR 122
R
Sbjct: 142 IHR 144
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 47.9 bits (114), Expect = 1e-06
Identities = 17/115 (14%), Positives = 31/115 (26%), Gaps = 25/115 (21%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
M+ GGGF M + V + Y+L
Sbjct: 38 MIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLI--------------------V 77
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLS 115
+ ++ + WI + + + G SAG H+V+ +
Sbjct: 78 GDQSVYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGG-----HVVATYN 127
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 47.7 bits (114), Expect = 2e-06
Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 30/113 (26%)
Query: 1 MVFVHGGGFLMGQATSNMYGP---EYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFL 57
++++HGGGF +G A P E + + ++YRL +P
Sbjct: 82 LLWIHGGGFAIGTA--ESSDPFCVEVARELGFAVANVEYRL------AP----------- 122
Query: 58 SFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E + D AL +I + EE G +P + + G+SAG AA
Sbjct: 123 -----ETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTV 170
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 46.8 bits (111), Expect = 2e-06
Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 24/113 (21%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
VFVHGG + + + + + + Y L P
Sbjct: 85 FVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNL------CPQ------------- 125
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 113
+ M L WI + E + +T G AGA ++ L+ P
Sbjct: 126 -VTLEQ--LMTQFTHFLNWIFDYTEMTKVSS--LTFAGHXAGAHLLAQILMRP 173
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 46.9 bits (112), Expect = 2e-06
Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 42/119 (35%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+V+ HGGGF++ S+ D N +V++ YRL +P
Sbjct: 82 LVYYHGGGFVICSIESH--------DALCRRIARLSNSTVVSVDYRL------AP----- 122
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E + D A +W+ EN EE +P + + G+SAG AA+VS
Sbjct: 123 -----------EHKFPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVS 170
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 47.1 bits (112), Expect = 2e-06
Identities = 21/105 (20%), Positives = 38/105 (36%), Gaps = 22/105 (20%)
Query: 1 MVFVHGGGFLMGQATSNMYGP--EYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLS 58
+V+ HGGG + + ++ V+V + +R
Sbjct: 112 LVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNA--WTAEG------------ 157
Query: 59 FGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGA 103
P G++D + A+ W+ E+ E G + V + GES G
Sbjct: 158 ----HHPFPSGVEDCLAAVLWVDEHRESLGLSG--VVVQGESGGG 196
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 46.5 bits (111), Expect = 3e-06
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 26/111 (23%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-NVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
+V+ H GGF +G ++ +V++ YRL +P
Sbjct: 88 VVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRL------AP------------- 128
Query: 60 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E P + D + L W+ N G + + + G SAG AA ++
Sbjct: 129 ---EHPYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLA 176
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 46.1 bits (110), Expect = 4e-06
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 42/119 (35%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+V+ HGGGF++G ++ DH V+V++ YRL +P
Sbjct: 79 VVYYHGGGFVLGSVETH--------DHVCRRLANLSGAVVVSVDYRL------AP----- 119
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E ++D A +W+ +N ++ G + + + G+SAG AA +
Sbjct: 120 -----------EHKFPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTA 167
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 45.6 bits (108), Expect = 6e-06
Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 27/116 (23%)
Query: 1 MVFVHGGGFLMGQATSNMYGP-EYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSF 59
++ V GG + + F H ++Y L
Sbjct: 53 IIIVPGGSYTHI-PVAQAESLAMAFAGHGYQAFYLEYTLL-------------------- 91
Query: 60 GNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSPLS 115
+ + G + D A+ ++++ E+ +P +T G S G H+V+ +
Sbjct: 92 TDQQPLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGG-----HIVALYN 142
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 45.7 bits (109), Expect = 7e-06
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 42/119 (35%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+V+ HGG +++G ++ D V+ ++ YRL +P
Sbjct: 77 LVYYHGGSWVVGDLETH--------DPVCRVLAKDGRAVVFSVDYRL------AP----- 117
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E ++D ALQWI E +F +P + + G+SAG AA S
Sbjct: 118 -----------EHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTS 165
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 45.3 bits (108), Expect = 7e-06
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 42/119 (35%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+++ HGGGF+ G ++ DH + V+V++ YRL +P
Sbjct: 76 VLYYHGGGFVFGSIETH--------DHICRRLSRLSDSVVVSVDYRL------AP----- 116
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E ++D AL+W+ + +E G +PD + + G+SAG AA VS
Sbjct: 117 -----------EYKFPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVS 164
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 44.2 bits (105), Expect = 2e-05
Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 42/122 (34%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+ ++HGGGF++G ++ D ++ I Y L SP
Sbjct: 90 LYYLHGGGFILGNLDTH--------DRIMRLLARYTGCTVIGIDYSL------SP----- 130
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVSY 108
+ +++ V + ++ +E+ N + + G+SAG A + +
Sbjct: 131 -----------QARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASAL 179
Query: 109 HL 110
L
Sbjct: 180 WL 181
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor,
gibberellin, gibberellin signaling pathway, hydrolase,
nucleus, receptor, developmental protein; HET: GA3;
1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Length = 351
Score = 42.8 bits (101), Expect = 6e-05
Identities = 26/114 (22%), Positives = 37/114 (32%), Gaps = 39/114 (34%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
++F HGG F A S +Y D V+V++ YR +P
Sbjct: 116 ILFFHGGSFAHSSANSAIY------DTLCRRLVGLCKCVVVSVNYRR------AP----- 158
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIF--GESAGA 103
E P D +AL W+ V IF G+S+G
Sbjct: 159 -----------ENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGG 201
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic,
dimer, archaea, R267G, hydro; 1.65A {Sulfolobus
tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Length = 323
Score = 41.5 bits (98), Expect = 1e-04
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 43/119 (36%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+V+ HGGGF++G S D V +++ YRL +P
Sbjct: 93 LVYYHGGGFVLGDIESY--------DPLCRAITNSCQCVTISVDYRL------AP----- 133
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AASVS 107
E + D AL+W+ N E+F G + + G+SAG AA +
Sbjct: 134 -----------ENKFPAAVVDSFDALKWVYNNSEKFNG-KYGIAVGGDSAGGNLAAVTA 180
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia
eriantha} PDB: 2o7v_A
Length = 338
Score = 41.2 bits (97), Expect = 2e-04
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 44/117 (37%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGI 51
+V+ HGGGF++ A S ++ VV+ ++ YRL +P
Sbjct: 86 VVYFHGGGFILFSAASTIF------HDFCCEMAVHAGVVIASVDYRL------AP----- 128
Query: 52 ITRGFLSFGNAE--VPGNLGMKDQVLALQWIQENIEEF---GGNPDSVTIFGESAGA 103
E +P D + ALQWI+++ +E+ + + I GESAG
Sbjct: 129 -----------EHRLPA--AYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGG 172
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold,
structural genomics, joint cente structural genomics,
JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Length = 262
Score = 40.3 bits (94), Expect = 3e-04
Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 28/113 (24%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGIITRGFLSFG 60
VFVHGG ++ +S + + + Y L E I
Sbjct: 66 FVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELC--PEVRISEI----------- 112
Query: 61 NAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAASVSYHLVSP 113
+ A+ + + + G SAG V+ L
Sbjct: 113 ---------TQQISQAVTAAAKE------IDGPIVLAGHSAGGHLVARMLDPE 150
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase,
gibberellin signaling pathway, hydrolase, nucleus,
hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp}
PDB: 3ed1_A*
Length = 365
Score = 38.5 bits (90), Expect = 0.001
Identities = 24/113 (21%), Positives = 38/113 (33%), Gaps = 39/113 (34%)
Query: 2 VFVHGGGFLMGQATSNMYGPEYFMDH---------NVVLVTIQYRLGVLAENSPDSIGII 52
+F HGG F+ A+S +Y D V+V++ YR +P
Sbjct: 116 IFFHGGSFVHSSASSTIY------DSLCRRFVKLSKGVVVSVNYRR------AP------ 157
Query: 53 TRGFLSFGNAEVPGNLGMKDQVLALQWIQEN--IEEFGGNPDSVTIFGESAGA 103
E D AL+W+ + G V + G+S+G
Sbjct: 158 ----------EHRYPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGG 200
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.9 bits (87), Expect = 0.003
Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 45/144 (31%)
Query: 106 VSYHLVSPLSKGKFES-RGGNNHFNFRLFHRAILQSGTASCSWASTPAWLARDRAHAFAT 164
+ +HL + + R +FR + I TA + S
Sbjct: 477 IGHHLKNIEHPERMTLFR--MVFLDFRFLEQKIRHDSTAWNASGS--------------- 519
Query: 165 LVGCPTQPIETVLDCLRQLPTETFVTTLNKFHIWFKNPMITFAPVIESPLSQNNFLP--- 221
+L+ L+QL + + K +I +P + ++ + L +FLP
Sbjct: 520 -----------ILNTLQQL--KFY-----KPYICDNDP--KYERLVNAIL---DFLPKIE 556
Query: 222 DHPLRLPHADVPIIIGVNNKEGEL 245
++ + + D+ + I + ++ +
Sbjct: 557 ENLICSKYTDL-LRIALMAEDEAI 579
Score = 32.9 bits (74), Expect = 0.12
Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 50/189 (26%)
Query: 22 EYFMDHNV-VLVTIQYRLGVLAENSPDSIGIITRGFLSFGNAEVPGNLGM-KDQVLAL-- 77
F + + +L+T +++ V D + T +S ++ + D+V +L
Sbjct: 260 NAF-NLSCKILLTTRFK-QVT-----DFLSAATTTHIS----LDHHSMTLTPDEVKSLLL 308
Query: 78 QWIQENIEEF-----GGNPDSVTIFGESAGAASVSYHLVSPLSKGKFESRGGNNHF-NFR 131
+++ ++ NP ++I ES R G + N++
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESI--------------------RDGLATWDNWK 348
Query: 132 LFHRAILQSGTASCSWASTPAWLARDRAHAFATL---VGCPTQPIETVLDCL-RQLPTET 187
+ L + S PA R + PT +L + +
Sbjct: 349 HVNCDKLTTIIESSLNVLEPA-EYRKMFDRLSVFPPSAHIPTI----LLSLIWFDVIKSD 403
Query: 188 FVTTLNKFH 196
+ +NK H
Sbjct: 404 VMVVVNKLH 412
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 34.7 bits (79), Expect = 0.029
Identities = 16/113 (14%), Positives = 35/113 (30%), Gaps = 23/113 (20%)
Query: 1 MVFVHGGG---------FLMGQATSNMYGPEYFMDHNVVLVTIQYRLGVLAENSPDSIGI 51
+VF+HG G + P Y + H ++ Q
Sbjct: 177 VVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPN------------ 224
Query: 52 ITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAGAA 104
+ + K + ++ I++ ++E+ + + + I G S G
Sbjct: 225 --SSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGY 275
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 30.3 bits (69), Expect = 0.56
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 54/126 (42%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-----------NVVLVTIQYRLGVLA-ENS-PD 47
++++HGGG++MG + H + + YRL A E+ P
Sbjct: 83 ILYLHGGGYVMGSINT----------HRSMVGEISRASQAAALLLDYRL---APEHPFPA 129
Query: 48 SIGIITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AA 104
++ +D V A +W+ + G P ++I G+SAG
Sbjct: 130 AV---------------------EDGVAAYRWLLDQ----GFKPQHLSISGDSAGGGLVL 164
Query: 105 SVSYHL 110
+V
Sbjct: 165 AVLVSA 170
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 30.0 bits (68), Expect = 0.69
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 54/126 (42%)
Query: 1 MVFVHGGGFLMGQATSNMYGPEYFMDH-----------NVVLVTIQYRLGVLA-ENS-PD 47
+++ HGGG++ G ++ H + L ++ YRL A EN P
Sbjct: 83 ILYFHGGGYISGSPST----------HLVLTTQLAKQSSATLWSLDYRL---APENPFPA 129
Query: 48 SIGIITRGFLSFGNAEVPGNLGMKDQVLALQWIQENIEEFGGNPDSVTIFGESAG---AA 104
++ D V A + + + G+ D + I G+SAG
Sbjct: 130 AV---------------------DDCVAAYRALLKT----AGSADRIIIAGDSAGGGLTT 164
Query: 105 SVSYHL 110
+
Sbjct: 165 ASMLKA 170
>1y4j_A Sulfatase modifying factor 2; formylglycine, sulfatases, multiple
sulfatase deficiency, HO DUF323, sugar binding protein;
HET: NAG FUC; 1.86A {Homo sapiens} SCOP: d.169.1.7
Length = 284
Score = 28.3 bits (63), Expect = 2.9
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1 MVFVHGGGFLMGQATSNMYGPE 22
MV + GG FLMG + + E
Sbjct: 4 MVQLQGGRFLMGTNSPDSRDGE 25
>2q17_A Formylglycine generating enzyme; FGE, sulfatase, unknown
function; 2.10A {Streptomyces coelicolor}
Length = 346
Score = 27.7 bits (61), Expect = 4.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 1 MVFVHGGGFLMGQATSNMY 19
V + GG F MG A Y
Sbjct: 58 QVRLPGGEFAMGDAFGEGY 76
>1z70_X C-alpha-formyglycine-generating enzyme; formylglycine, multiple
sulfatase deficiency, cysteine sulfe oxidoreductase;
HET: OCS NAG CXS; 1.15A {Homo sapiens} SCOP: d.169.1.7
PDB: 1y1f_X* 1y1e_X* 1y1h_X* 1y1i_X* 1y1g_X* 1y1j_X*
2aii_X* 2aij_X* 2aft_X* 2aik_X* 2hi8_X* 2hib_X* 2afy_X*
Length = 311
Score = 27.5 bits (61), Expect = 5.0
Identities = 6/16 (37%), Positives = 7/16 (43%)
Query: 1 MVFVHGGGFLMGQATS 16
MV + G F MG
Sbjct: 19 MVPIPAGVFTMGTDDP 34
>2y3c_A Treponema denticola variable protein 1; unknown function,
periodontal disease; HET: CME; 1.40A {Treponema
denticola}
Length = 294
Score = 26.7 bits (59), Expect = 8.8
Identities = 2/13 (15%), Positives = 4/13 (30%)
Query: 1 MVFVHGGGFLMGQ 13
M + +G
Sbjct: 32 MKGIAAVNAQLGH 44
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.137 0.417
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,195,775
Number of extensions: 247748
Number of successful extensions: 657
Number of sequences better than 10.0: 1
Number of HSP's gapped: 567
Number of HSP's successfully gapped: 61
Length of query: 274
Length of database: 6,701,793
Length adjustment: 92
Effective length of query: 182
Effective length of database: 4,133,061
Effective search space: 752217102
Effective search space used: 752217102
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.7 bits)