BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12962
(75 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P20060|HEXB_MOUSE Beta-hexosaminidase subunit beta OS=Mus musculus GN=Hexb PE=2 SV=2
Length = 536
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G NLL + T + +GP+DPT +++Y F F E+ SVF D+F+
Sbjct: 273 HTQSWGKGQKNLLTPCY----NQKTKTQVFGPVDPTVNTTYAFFNTFFKEISSVFPDQFI 328
Query: 64 HTGGDEVDFYCW 75
H GGDEV+F CW
Sbjct: 329 HLGGDEVEFQCW 340
>sp|P29416|HEXA_MOUSE Beta-hexosaminidase subunit alpha OS=Mus musculus GN=Hexa PE=2 SV=2
Length = 528
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL + L+ T +GP++P+ +S+YDF+ LF E+ SVF D +L
Sbjct: 262 HTLSWGPGAPGLLTPC-YSGSHLSGT---FGPVNPSLNSTYDFMSTLFLEISSVFPDFYL 317
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 318 HLGGDEVDFTCW 329
>sp|Q641X3|HEXA_RAT Beta-hexosaminidase subunit alpha OS=Rattus norvegicus GN=Hexa PE=2
SV=1
Length = 528
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL + L+ T +GP++P+ +S+YDF+ F E+ SVF D +L
Sbjct: 262 HTLSWGAGVPGLLTPC-YSGSRLSGT---YGPVNPSLNSTYDFMSTFFLEISSVFPDFYL 317
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 318 HLGGDEVDFTCW 329
>sp|P07686|HEXB_HUMAN Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3
Length = 556
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G +LL L++ +GPI+PT +++Y F+ F E+ VF D+F+
Sbjct: 294 HTLSWGKGQKDLLTPCYSRQNKLDS----FGPINPTLNTTYSFLTTFFKEISEVFPDQFI 349
Query: 64 HTGGDEVDFYCW 75
H GGDEV+F CW
Sbjct: 350 HLGGDEVEFKCW 361
>sp|Q6AXR4|HEXB_RAT Beta-hexosaminidase subunit beta OS=Rattus norvegicus GN=Hexb PE=2
SV=1
Length = 537
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G NLL I + GP+DP+ +++Y F F E+ VF D+F+
Sbjct: 272 HTQSWGKGQKNLLTPCFIQ----KIRTQKVGPVDPSLNTTYVFFDTFFKEISRVFPDQFI 327
Query: 64 HTGGDEVDFYCW 75
H GGDEV+F CW
Sbjct: 328 HLGGDEVEFECW 339
>sp|P49614|HEXB_FELCA Beta-hexosaminidase subunit beta OS=Felis catus GN=HEXB PE=2 SV=2
Length = 531
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEY--WGPIDPTKSSSYDFVRDLFTEVRSVFHDE 61
H SWG G +LL P N ++ +GPI+P +S+Y+F+ F EV VF D
Sbjct: 268 HTQSWGKGQKDLLT------PCYNEHKQSGTFGPINPILNSTYNFLSQFFKEVSMVFPDH 321
Query: 62 FLHTGGDEVDFYCW 75
F+H GGDEV+F CW
Sbjct: 322 FVHLGGDEVEFQCW 335
>sp|Q29548|HEXB_PIG Beta-hexosaminidase subunit beta OS=Sus scrofa GN=HEXB PE=1 SV=2
Length = 531
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G +LL +GPI+P +++Y+F+ F E+ +VF DEF+
Sbjct: 268 HSRSWGKGQKDLLTPCYRK----QVLSGTFGPINPILNTTYNFLSKFFKEISTVFPDEFI 323
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 324 HIGGDEVDFDCW 335
>sp|Q5RC84|HEXA_PONAB Beta-hexosaminidase subunit alpha OS=Pongo abelii GN=HEXA PE=3 SV=1
Length = 529
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL T +GP++P+ +++Y+F+ F EV SVF D +L
Sbjct: 262 HTLSWGPGIPGLLTPCYSGSEPSGT----FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYL 317
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 318 HLGGDEVDFTCW 329
>sp|P06865|HEXA_HUMAN Beta-hexosaminidase subunit alpha OS=Homo sapiens GN=HEXA PE=1 SV=2
Length = 529
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL T +GP++P+ +++Y+F+ F EV SVF D +L
Sbjct: 262 HTLSWGPGIPGLLTPCYSGSEPSGT----FGPVNPSLNNTYEFMSTFFLEVSSVFPDFYL 317
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 318 HLGGDEVDFTCW 329
>sp|Q0V8R6|HEXA_BOVIN Beta-hexosaminidase subunit alpha OS=Bos taurus GN=HEXA PE=2 SV=1
Length = 529
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL T +GP++P +++Y+F+ F E+ +VF D +L
Sbjct: 262 HTLSWGPGVPGLLTPCYSGSHPSGT----FGPVNPALNNTYEFMSTFFLEISTVFPDFYL 317
Query: 64 HTGGDEVDFYCW 75
H GGDEVDF CW
Sbjct: 318 HLGGDEVDFTCW 329
>sp|P13723|HEXA1_DICDI Beta-hexosaminidase subunit A1 OS=Dictyostelium discoideum GN=hexa1
PE=1 SV=1
Length = 532
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H +WG G P L+ T PD P+D + +++ F+++LFTE+ +F D +
Sbjct: 248 HAAAWGIGYPELVA----TCPDYAANVNNI-PLDISNPATFTFIQNLFTEIAPLFIDNYF 302
Query: 64 HTGGDEVDFYCW 75
HTGGDE+ CW
Sbjct: 303 HTGGDELVTGCW 314
>sp|Q54SC9|HEXA2_DICDI Beta-hexosaminidase subunit A2 OS=Dictyostelium discoideum GN=hexa2
PE=3 SV=1
Length = 541
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P LL + + P+D + +Y F+ + F+E+ +F D +
Sbjct: 256 HSASWGVGYPELLS-------NCPGYPQSSIPLDCSNPYTYSFLENFFSEIAPLFQDSYF 308
Query: 64 HTGGDEVDFYCW 75
HTGGDE+ CW
Sbjct: 309 HTGGDELVIDCW 320
>sp|A7WM73|HEXO1_ARATH Beta-hexosaminidase 1 OS=Arabidopsis thaliana GN=HEXO1 PE=1 SV=1
Length = 541
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P+L P L+ + P+D TK+ ++D + + ++R +F E
Sbjct: 278 HAESWGTGYPDLW-------PSLSCRE----PLDVTKNFTFDVISGILADMRKIFPFELF 326
Query: 64 HTGGDEVDFYCW 75
H GGDEV+ CW
Sbjct: 327 HLGGDEVNTDCW 338
>sp|Q22492|HEXA_CAEEL Beta-hexosaminidase A OS=Caenorhabditis elegans GN=hex-1 PE=1 SV=1
Length = 555
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 36 IDPTKSSSYDFVRDLFTEVRSVFHDEFLHTGGDEVDFY---CW 75
+DP +++DF+ + EV F D+FLH GGDEV Y CW
Sbjct: 292 VDPMNEANFDFISEFLEEVTETFPDQFLHLGGDEVSDYIVECW 334
>sp|Q619W7|HEXA_CAEBR Beta-hexosaminidase A OS=Caenorhabditis briggsae GN=hex-1 PE=3 SV=2
Length = 552
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 36 IDPTKSSSYDFVRDLFTEVRSVFHDEFLHTGGDEVDFY---CW 75
+DP +++DF+ + EV F D+FLH GGDEV Y CW
Sbjct: 289 VDPMNDANFDFLAEFLEEVTETFPDQFLHLGGDEVSDYIVECW 331
>sp|Q54K56|HEXB2_DICDI Beta-hexosaminidase subunit B2 OS=Dictyostelium discoideum GN=hexb2
PE=3 SV=1
Length = 564
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 1 MSWHVWSWGYGNPNLLCK-----INITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVR 55
M H +SWG G P++L I P E P+D + SY L E
Sbjct: 285 MPGHAYSWGIGYPSVLPANFSHSIQCQQP---CPTECNIPLDVSSKESYVIAMGLLEEFN 341
Query: 56 --SVFHDEFLHTGGDEVDFYCW 75
S+F++ F H GGDEV + CW
Sbjct: 342 GASMFNESFFHIGGDEVAYSCW 363
>sp|P49010|HEXC_BOMMO Chitooligosaccharidolytic beta-N-acetylglucosaminidase OS=Bombyx
mori PE=1 SV=1
Length = 596
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 34 GPIDPTKSSSYDFVRDLFTEVRSVFHD-EFLHTGGDEVDFYCW 75
G ++PTK YD++ D++ E+ F + H GGDEV CW
Sbjct: 334 GQLNPTKEELYDYLEDIYVEMAEAFESTDMFHMGGDEVSERCW 376
>sp|Q8L7S6|HEXO3_ARATH Beta-hexosaminidase 3 OS=Arabidopsis thaliana GN=HEXO3 PE=1 SV=1
Length = 535
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 4 HVWSWGYGNPNLLCKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFL 63
H SWG G P L P N + P+D + ++ + + ++ +F +F+
Sbjct: 275 HALSWGKGYPALW-------PSKNCQE----PLDVSSDFTFKVIDGILSDFSKIFKFKFV 323
Query: 64 HTGGDEVDFYCW 75
H GGDEV+ CW
Sbjct: 324 HLGGDEVNTTCW 335
>sp|Q9SYK0|HEXO2_ARATH Beta-hexosaminidase 2 OS=Arabidopsis thaliana GN=HEXO2 PE=1 SV=1
Length = 580
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 4 HVWSWGYGNPNLLCKINI-------TIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRS 56
H SWG P ++ N+ + + ++ G ++P +Y+ V+++ ++ +
Sbjct: 265 HTGSWGEAYPEIVTCANMFWWPAGKSWEERLASEPGTGQLNPLSPKTYEVVKNVIQDIVN 324
Query: 57 VFHDEFLHTGGDEVDFYCW 75
F + F H GGDEV CW
Sbjct: 325 QFPESFFHGGGDEVIPGCW 343
>sp|Q86M34|HEXB_ENTHI Beta-hexosaminidase subunit beta OS=Entamoeba histolytica GN=HEXB
PE=1 SV=1
Length = 565
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 4 HVWSWGYGNPNLLCKI-NITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEF 62
H SW G P ++ I + + E ++P ++ + L E+ VF +++
Sbjct: 281 HTASWNAGYPGVVADIWDYIVSSSMRYGENVLALNPANEKTFSIIDALMKEMGEVFGNDY 340
Query: 63 LHTGGDEVDFYCW 75
+H GGDEV W
Sbjct: 341 VHFGGDEVWTGAW 353
>sp|Q54K55|HEXB1_DICDI Beta-hexosaminidase subunit B1 OS=Dictyostelium discoideum GN=hexb1
PE=3 SV=1
Length = 560
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 30/99 (30%)
Query: 1 MSWHVWSWGYGNPNLL------CKINITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEV 54
M H SW G P+LL I PD Y P+DP+ S L +E
Sbjct: 273 MPGHAKSWSVGYPDLLPHGWNDSTTTIKCPD------YDVPLDPSSPLSLPISFGLLSEF 326
Query: 55 ---------------RSVFH---DEFLHTGGDEVDFYCW 75
++F+ D+ H GGDE+++ CW
Sbjct: 327 SGTDYGYNPNYDDKSNNLFNLTVDDLFHVGGDEIEYQCW 365
>sp|Q7WUL4|HEX20_CELFI Beta-N-acetylhexosaminidase OS=Cellulomonas fimi GN=hex20 PE=1 SV=1
Length = 496
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 46 FVRDLFTEVRSVFHDEFLHTGGDEV 70
F+RD+FT++ ++ E++H GGDEV
Sbjct: 275 FLRDVFTDLAAMTPGEYVHIGGDEV 299
>sp|P43077|HEX1_CANAX Beta-hexosaminidase OS=Candida albicans GN=HEX1 PE=1 SV=1
Length = 562
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 34 GPIDPTKSSSYDFVRDLFTEVRSVFHDEFLHTGGDEVDFYCW 75
G ++ +Y+ + +++ E+ +F D+ H G DE+ C+
Sbjct: 289 GQLNIESEKTYEVISNVYNELSDIFIDDVFHVGNDELQEKCY 330
>sp|P23622|CYS14_NEUCR Sulfate permease 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=cys-14 PE=2 SV=3
Length = 819
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 28 TTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEFLHTGGD 68
TTQ++ I PT + +++R+LF V +FH GD
Sbjct: 40 TTQDFLNEIRPTVQGTLNYLRELFPFVNWIFHYNLTWLLGD 80
>sp|Q54JU3|GCSH3_DICDI Putative glycine cleavage system H protein 3 OS=Dictyostelium
discoideum GN=gcvH3 PE=3 SV=1
Length = 149
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Query: 10 YGNPNLLCKINITIPDLNTT---QEYWGPIDPTKSSSYDFVRDLFTEV 54
Y + L +NI +PDLN+T ++ +G I+ TK+ V DLF++V
Sbjct: 47 YASDQLKSIVNINLPDLNSTITRKQPFGNIESTKT-----VADLFSDV 89
>sp|Q8WSF3|FDL_DROME Probable beta-hexosaminidase fdl OS=Drosophila melanogaster GN=fdl
PE=1 SV=1
Length = 660
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 34 GPIDPTKSSSYDFVRDLFTEV-RSVFHDEFLHTGGDEVDFYCW 75
G ++P + +Y ++ ++ E+ + +F H GGDEV+ CW
Sbjct: 405 GQLNPKNNYTYLILQRIYEELLQHTGPTDFFHLGGDEVNLDCW 447
>sp|P49008|HEXA_PORGI Beta-hexosaminidase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=nahA PE=3 SV=2
Length = 777
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 40 KSSSYDFVRDLFTEVRSVFHDEFLHTGGDE 69
K S + F+ D+ EV +F + H GGDE
Sbjct: 306 KDSVFRFISDVIDEVAPLFPGTYFHIGGDE 335
>sp|P49009|HEXA_ENTHI Beta-hexosaminidase subunit alpha OS=Entamoeba histolytica GN=HEXA
PE=1 SV=2
Length = 564
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 4 HVWSWGYGNPNLLCKI-NITIPDLNTTQEYWGPIDPTKSSSYDFVRDLFTEVRSVFHDEF 62
H SW G P ++ + + E ++P +++ + L E+ F ++
Sbjct: 277 HTASWNLGYPGVVANCWDYIVSTSMRYGENVLSLNPANPNTFPIIDALMKELSDTFGTDY 336
Query: 63 LHTGGDEV 70
+H GGDEV
Sbjct: 337 VHVGGDEV 344
>sp|O14096|TGTL_SCHPO Queuine tRNA-ribosyltransferase-like protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC2F3.13c PE=3 SV=4
Length = 649
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 13 PNLLCKIN-------ITIPDLNTTQEYWGPI---DPTKSSSYDFVRDLFTEVRSVFHDEF 62
P +LC +N I DL ++ + KSS+ D +++ + +S++HDE
Sbjct: 578 PAVLCYVNSQLVDKIIGFADLGNKDDFETSLLEFRLLKSSAIDRLKEESSSNKSIYHDEL 637
Query: 63 LHTGGDEVDFY 73
+ D+ DF+
Sbjct: 638 QNNQSDDSDFF 648
>sp|P96155|HEX1_VIBFU Beta-hexosaminidase OS=Vibrio furnissii GN=exo I PE=1 SV=1
Length = 611
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 36 IDPTKSSSYDFVRDLFTEVRSVFHDEFLHTGGDEVDFYCW 75
+ P +Y F+ + EV ++F F+H G DEV W
Sbjct: 402 LSPALPGTYRFLDCVLEEVAALFPSHFIHIGADEVPDGVW 441
>sp|O14095|PLP1_SCHPO Thioredoxin domain-containing protein plp1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=plp1 PE=1 SV=2
Length = 279
Score = 29.6 bits (65), Expect = 6.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 13 PNLLCKIN-------ITIPDLNTTQEYWGPI---DPTKSSSYDFVRDLFTEVRSVFHDEF 62
P +LC +N I DL ++ + KSS+ D +++ + +S++HDE
Sbjct: 208 PAVLCYVNSQLVDKIIGFADLGNKDDFETSLLEFRLLKSSAIDRLKEESSSNKSIYHDEL 267
Query: 63 LHTGGDEVDFY 73
+ D+ DF+
Sbjct: 268 QNNQSDDSDFF 278
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.509
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,731,611
Number of Sequences: 539616
Number of extensions: 1106311
Number of successful extensions: 2338
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2299
Number of HSP's gapped (non-prelim): 31
length of query: 75
length of database: 191,569,459
effective HSP length: 46
effective length of query: 29
effective length of database: 166,747,123
effective search space: 4835666567
effective search space used: 4835666567
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)