BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12968
(402 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 204 bits (520), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 178/306 (58%), Gaps = 26/306 (8%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREKPILVKVKVL 76
+Y+ L+ EK +LD S ++ L+L++ EI K + K + Y+D+ K + + KVL
Sbjct: 4 KYLPELMAEKDSLDP-SFTHALRLVNQEIEK-FQKGEGKDEEKYIDVVINKNMKLGQKVL 61
Query: 77 VPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKNA 136
+PVK+ P+FNFVGKLLGP+GNSL+RLQEET+TKMSILGKGSMRD++KEEELRK G+ K
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 137 HLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH----HE 192
HL +DLHV + APPAEA+AR+ +AL E++K++IPD NDEIRQ Q +E+ Y++ +
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENA 181
Query: 193 PRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA-------ASRGK 245
P +R P PAP + A P +V P P P SRG+
Sbjct: 182 DVPVVRG--KPTLRTRGVPAPAITRGRGGVTARPVGVVVPRGTPTPRGVLSTRGPVSRGR 239
Query: 246 VLSILDRARAA---------MEKPAPSAGVYEYEDPHAAHAYYETTASYDPAMYDPYAST 296
L + RAR + G Y+Y+D + ++ SYD + P A +
Sbjct: 240 GL-LTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYGTAYDEQSYDSYDNSYSTP-AQS 297
Query: 297 AGDYYD 302
DYYD
Sbjct: 298 GADYYD 303
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 177/307 (57%), Gaps = 28/307 (9%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREKPILVKVKVL 76
+Y+ L+ EK +LD S ++ L+L++ EI K K+ + Y+D+ K + + KVL
Sbjct: 4 KYLPELMAEKDSLDP-SFTHALRLVNREIEKFQKGEGKE-EEKYIDVVINKNMKLGQKVL 61
Query: 77 VPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKNA 136
+PVK+ P+FNFVGKLLGP+GNSL+RLQEET+TKMSILGKGSMRD++KEEELRK G+ K
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 137 HLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH----HE 192
HL +DLHV + APPAEA+AR+ +AL E++K++IPD NDEIRQ Q +E+ Y++ +
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIPDYNDEIRQAQLQELTYLNGGSENA 181
Query: 193 PRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPAA--------SRG 244
P +R PA + R A P V P P P SRG
Sbjct: 182 DVPVVRGKSTLRTRGVTTPA---ITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRG 238
Query: 245 KVLSILDRARAA---------MEKPAPSAGVYEYEDPHAAHAYYETTASYDPAMYDPYAS 295
+ L + RAR + G Y+Y+D + ++ SYD + P A
Sbjct: 239 RGL-LTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYGTAYDEQSYDSYDNSYSTP-AQ 296
Query: 296 TAGDYYD 302
+A DYYD
Sbjct: 297 SAADYYD 303
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 199 bits (505), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 177/307 (57%), Gaps = 28/307 (9%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREKPILVKVKVL 76
+Y+ L+ EK +LD S ++ L+L++ EI K + K + Y+D+ K + + KVL
Sbjct: 4 KYLPELMAEKDSLDP-SFTHALRLVNREIEK-FQKGEAKDEEKYIDVVINKNMKLGQKVL 61
Query: 77 VPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKNA 136
+PVK+ P+FNFVGKLLGP+GNSL+RLQEET+TKMSILGKGSMRD++KEEELRK G+ K
Sbjct: 62 IPVKQFPKFNFVGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYF 121
Query: 137 HLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH----HE 192
HL +DLHV + APPAEA+AR+ +AL +++K++IPD NDEIRQ Q +E+ Y++ +
Sbjct: 122 HLNDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIPDYNDEIRQAQLQELTYLNGGSENA 181
Query: 193 PRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPAA--------SRG 244
P +R PA + R A P V P P P SRG
Sbjct: 182 DVPVVRGKSTLRTRGVTTPA---ITRGRGGVTARPVAVGVPRGTPTPRGVLSTRGPVSRG 238
Query: 245 KVLSILDRARAA---------MEKPAPSAGVYEYEDPHAAHAYYETTASYDPAMYDPYAS 295
+ L + RAR + G Y+Y+D ++ ++ SYD + P A
Sbjct: 239 RGL-LTPRARGVPPTGYRPPPPPPTQETYGEYDYDDGYSTAYDDQSYDSYDNSYSTP-AQ 296
Query: 296 TAGDYYD 302
+ DYYD
Sbjct: 297 SGADYYD 303
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 197 bits (502), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 3/175 (1%)
Query: 18 YVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDS--PYLDLFREKPILVKVKV 75
Y+ L+ EK +LD S + +LL +EI K S+ KK D YLD+ K I + +V
Sbjct: 6 YLPELMAEKDSLDP-SFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERV 64
Query: 76 LVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKN 135
L+PVK++P+FNFVGKLLGP+GNSL+RLQEET KMSILGKGSMRD++KEEELRK G+ K
Sbjct: 65 LIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKY 124
Query: 136 AHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH 190
AHL ++LHV + APP EA++R+++AL E++K+++PD NDEIRQEQ RE+ Y++
Sbjct: 125 AHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLN 179
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 132/175 (75%), Gaps = 3/175 (1%)
Query: 18 YVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDS--PYLDLFREKPILVKVKV 75
Y+ L+ EK +LD S + +LL +EI K S+ KK D YLD+ K I + +V
Sbjct: 6 YLPELMAEKDSLDP-SFVHASRLLAEEIEKFQGSDGKKEDEEKKYLDVISNKNIKLSERV 64
Query: 76 LVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKN 135
L+PVK++P+FNFVGKLLGP+GNSL+RLQEET KMSILGKGSMRD++KEEELRK G+ K
Sbjct: 65 LIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKY 124
Query: 136 AHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH 190
AHL ++LHV + APP EA++R+++AL E++K+++PD NDEIRQEQ RE+ Y++
Sbjct: 125 AHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLN 179
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Query: 16 NEYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSP-YLDLFREKPILVKVK 74
N+Y+ L+ EK +LD S ++ ++LL EI K + KK D YLDLF K + +K +
Sbjct: 101 NKYLPELMAEKDSLDP-SFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKER 159
Query: 75 VLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPK 134
VL+PVK++P+FNFVGK+LGP+GN+++RLQEET K+S+LGKGSMRD++KEEELRK GDPK
Sbjct: 160 VLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPK 219
Query: 135 NAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVHHEPR 194
AHL DLHV + PP EA+A +A+A+ E++K+++PD+ D+I QEQF E+ Y++ P
Sbjct: 220 YAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPE 279
Query: 195 P 195
P
Sbjct: 280 P 280
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
Query: 16 NEYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSP-YLDLFREKPILVKVK 74
N+Y+ L+ EK +LD S ++ ++LL EI K KK D YLDLF K + +K +
Sbjct: 101 NKYLPELMAEKDSLDP-SFTHAMQLLSVEIEKIQKGESKKDDEENYLDLFSHKNMKLKER 159
Query: 75 VLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPK 134
VL+PVK++P+FNFVGK+LGP+GN+++RLQEET K+S+LGKGSMRD++KEEELRK GDPK
Sbjct: 160 VLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPK 219
Query: 135 NAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVHHEPR 194
AHL DLHV + PP EA+A +A+A+ E++K+++PD+ D+I QEQF E+ Y++ P
Sbjct: 220 YAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPE 279
Query: 195 P 195
P
Sbjct: 280 P 280
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
Query: 16 NEYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDSP-YLDLFREKPILVKVK 74
N+Y+ L+ EK +LD S ++ ++LL EI K KK D YLDLF K + +K +
Sbjct: 101 NKYLPELMAEKDSLDP-SFTHAMQLLSVEIEKIQKGESKKDDEENYLDLFSHKNMKLKER 159
Query: 75 VLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPK 134
VL+PVK++P+FNFVGK+LGP+GN+++RLQEET K+S+LGKGSMRD++KEEELRK GDPK
Sbjct: 160 VLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPK 219
Query: 135 NAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVHHEPR 194
AHL DLHV + PP EA+A +A+A+ E++K+++PD+ D+I QEQF E+ Y++ P
Sbjct: 220 YAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVPE 279
Query: 195 P 195
P
Sbjct: 280 P 280
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 132/175 (75%), Gaps = 3/175 (1%)
Query: 18 YVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDS--PYLDLFREKPILVKVKV 75
Y+ L+ EK +LD S + +LL +EI K S+ +K D YLD+ K I + +V
Sbjct: 6 YLPELMAEKDSLDP-SFVHASRLLAEEIEKFQGSDGRKEDEEKKYLDVISNKNIKLSERV 64
Query: 76 LVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKN 135
L+PVK++P+FNFVGKLLGP+GNSL+RLQEET KMSILGKGSMRD++KEEELRK G+ K
Sbjct: 65 LIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKY 124
Query: 136 AHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH 190
AHL ++LHV + APP EA++R+++AL E++K+++PD NDEIRQEQ RE+ Y++
Sbjct: 125 AHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLN 179
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/257 (44%), Positives = 157/257 (61%), Gaps = 27/257 (10%)
Query: 16 NEYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMASNKKKYDS--PYLDLFREKPILVKV 73
++Y+ L+ EK +LD+ S + ++LL +EI K +K YLD+ K I +
Sbjct: 4 DKYLPELVAEKESLDA-SFVHAMRLLAEEIEKFEGDELRKDGEVKKYLDIISNKNIKLSE 62
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
+VL+PV+++P+FNFVGKLLGP+GNS++RLQEET KMSILGKGSMRD+ KEEELRK G+
Sbjct: 63 RVLIPVQQYPKFNFVGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEA 122
Query: 134 KNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVHHEP 193
K AHL DLHV + APP EA++R+++AL E++K+++PD NDEIRQEQ RE+ Y++
Sbjct: 123 KYAHLSNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLNGSD 182
Query: 194 RPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPP----AASRGKVLSI 249
P R A G R+ A P PP PP AA RG V S
Sbjct: 183 DPSR-----------GRSARGRGL--RLTSTASPRGRGSAAPPAPPGRGAAAPRGTVSS- 228
Query: 250 LDRARAAMEKPAPSAGV 266
R ++ P P+ GV
Sbjct: 229 ----RTSV--PTPARGV 239
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 133/175 (76%), Gaps = 3/175 (1%)
Query: 18 YVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMAS--NKKKYDSPYLDLFREKPILVKVKV 75
Y+ L+ EK +LD S + ++LLD+EI K S NK+ + YLD+ K I + +V
Sbjct: 6 YLPELMAEKDSLDP-SFVHAMRLLDEEIVKFQDSEGNKEDGEKKYLDIISNKNIKLSERV 64
Query: 76 LVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKN 135
L+PVK++P+FNFVGKLLGP+GNSL+RLQEET KMSILGKGSMRD+ KEEELRK + K+
Sbjct: 65 LIPVKQYPKFNFVGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKH 124
Query: 136 AHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVH 190
AHL ++LHV + APP EA++R+++AL E++K+++PD NDEIRQEQ RE+ Y++
Sbjct: 125 AHLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVPDYNDEIRQEQLRELSYLN 179
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/182 (51%), Positives = 135/182 (74%), Gaps = 3/182 (1%)
Query: 16 NEYVKTLLKEKMTLDSDSHSYTLKLLDDEINKAMA--SNKKKYDSPYLDLFREKPILVKV 73
N+Y+ L+ EK +LD S ++ ++LL EI K + KK + YLDLF K + +K
Sbjct: 83 NKYLPELMAEKDSLDPSS-THAMQLLSAEIEKIQKGETTKKDEEENYLDLFSHKNMKLKE 141
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
+VL+PVK++P+FNFVGK+LGP+GN+++RLQEET K+S+LGKGSMRD++KEEELRK GDP
Sbjct: 142 RVLIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP 201
Query: 134 KNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDVNDEIRQEQFREMGYVHHEP 193
K AHL DLHV + PP EA+A +A+A+ E++K+++PD+ D+I QEQF E+ Y++ P
Sbjct: 202 KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNGVP 261
Query: 194 RP 195
P
Sbjct: 262 EP 263
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 113/166 (68%), Gaps = 10/166 (6%)
Query: 18 YVKTLLKE-----KMTLDSDSHSYTLKLLDDEINKAMASNKKKY-----DSPYLDLFREK 67
YV+ L+K+ +M + L +D EI ++ K S ++DL+ +
Sbjct: 11 YVRDLVKDYDDARQMLTQAGVSEAVLGTIDAEIKHIKTGSRPKTVPNTDGSGFMDLYNDT 70
Query: 68 PILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEEL 127
+ + + +PV + P++NF+GKLLGP G+++++LQ+ETMTK+SILG+GSMRDR+KEEEL
Sbjct: 71 KVKLVSRCCLPVDQFPKYNFLGKLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKEEEL 130
Query: 128 RKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPD 173
R GD K AHL E LH+++ ++A PAEAHAR+AYAL+E++KYI P+
Sbjct: 131 RNSGDVKYAHLNEQLHIEIISIASPAEAHARMAYALTEIKKYITPE 176
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 32/285 (11%)
Query: 17 EYVKTLLKEK--MTLDSDSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREKPILVKV- 73
EY+ L+KEK +TL S +LLDDEI + + + + P ++L ++ +
Sbjct: 148 EYLADLVKEKKHLTLFPHMFSNVERLLDDEIGRVRVA-LFQTEFPRVELPEPAGDMISIT 206
Query: 74 -KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGD 132
K+ VP E+P +NFVG++LGP+G + ++L+++T K+ + GKGSMRD+SKE R G
Sbjct: 207 EKIYVPKNEYPDYNFVGRILGPRGMTAKQLEQDTGCKIMVRGKGSMRDKSKESAHR--GK 264
Query: 133 PKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYII--PDVNDEIRQEQFREMGYVH 190
HL +DLHV V H ++ AL +++K +I P+ DE++++Q E+ ++
Sbjct: 265 ANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIPAPEGTDELKRKQLMELAIIN 324
Query: 191 HEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPAASRGKVLSIL 250
RP M+ P P M A LL+P ++ + P M P P G +LS
Sbjct: 325 GTYRP-MKSPNPARVMTAV----PLLSPTPLRSSGPVLMSPTPGSGLPSTTFGGSILSPT 379
Query: 251 DRARAAMEKPAPSAGVYEYEDPHAAHAYYETTASYDPAMYDPYAS 295
A + + V++Y + P+M+D ++S
Sbjct: 380 LTASNLL-----GSNVFDY-------------SLLSPSMFDSFSS 406
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 108/182 (59%), Gaps = 10/182 (5%)
Query: 17 EYVKTLLKEKMTLDSDSHSYT--LKLLDDEINKAMAS----NKKKYDSPYLDLFREKPIL 70
+Y+ LLK++ L + + +T +LLD+EI + AS N K + L +
Sbjct: 77 DYLAQLLKDRKQLAAFPNVFTHVERLLDEEIARVRASLFQINGVKKEPLTLPEPEGSVVT 136
Query: 71 VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKE 130
+ KV VPV+EHP FNFVG++LGP+G + ++L++ET K+ + GKGSMRD+ KE+ R
Sbjct: 137 MNEKVYVPVREHPDFNFVGRILGPRGMTAKQLEQETGCKIMVRGKGSMRDKKKEDANR-- 194
Query: 131 GDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIPDV--NDEIRQEQFREMGY 188
G P HL +DLHV ++ A ++A A++E++K ++P DE+++ Q E+
Sbjct: 195 GKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVPQAEGEDELKKRQLMELAI 254
Query: 189 VH 190
++
Sbjct: 255 IN 256
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 142/282 (50%), Gaps = 35/282 (12%)
Query: 17 EYVKTLLKEKMTLDS-----DSHSYTLKLLDDEINKAM---------ASNKKKYDSPYLD 62
+Y+ L+ +K + S ++ +LLD+EI++ SN +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRVRKDMYNDTLNGSNNEKRTNELPD 75
Query: 63 LFREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDR 121
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 GI--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDK 133
Query: 122 SKEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIR 179
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D ++
Sbjct: 134 KKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLK 191
Query: 180 QEQFREMGYVHHEPR-PQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPP 238
+ Q E+ ++ R ++ P + A AP ++ P PP +R P P P
Sbjct: 192 KMQLMELAILNGTYRDANLKSPALAFSLAATAQAPRIITGP--APVLPPAALRTPTPAGP 249
Query: 239 ---PAASRGKVLSILDRA----RAAMEKPAPSAGV----YEY 269
P + + +++ A + AP AG+ YEY
Sbjct: 250 TLMPLIRQIQTATVMPNGTPHPTATLMSQAPEAGLIYTPYEY 291
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 31/281 (11%)
Query: 17 EYVKTLLKEKMTLDS-----DSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREKP--- 68
+Y+ LL EK + S ++ +LLD+EIN+ K Y+ L + P
Sbjct: 16 DYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRV---RKDMYNDSVNGLVDKHPLEL 72
Query: 69 -------ILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDR 121
+ ++ K+ VPVKE+P +NFVG++LGP+G + ++L+ ET K+ + G+ SMRD+
Sbjct: 73 PEPVGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGCKIMVRGRSSMRDK 132
Query: 122 SKEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIR 179
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D ++
Sbjct: 133 KKEEQNR--GKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVPAAEGEDNLK 190
Query: 180 QEQFREMGYVHHEPR-PQMRHPRPPPHMVAARP---APGLLAPPRMQHAAPPHMVRPPHP 235
+ Q E+ ++ R ++ P + AA P L+A P Q PP +RPP P
Sbjct: 191 KMQLMELAILNGTYRDTNIKAPTLAFSLAAAAAAAQGPRLIAAPPGQ-VLPPATLRPPTP 249
Query: 236 PPPPAASR---GKVLSILDRARAAMEKPAPSAGVYEYEDPH 273
P + ++ ++L + P P AG+ Y P+
Sbjct: 250 AGTPIMNIIRPTQMATVLPNGTPTLVPPTPDAGII-YTTPY 289
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 140/280 (50%), Gaps = 33/280 (11%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K +IP + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPR-PQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPP 239
Q E+ ++ R ++ P + A AP ++ P PP +R P P P
Sbjct: 192 MQLMELAILNGTYRDANIKSPALAFSLAATAQAPRIITGP--APVLPPAALRTPTPAGPT 249
Query: 240 AA--SRGKVLSILDRA----RAAMEKPAPSAGV----YEY 269
R +++ AA+ P P AG+ YEY
Sbjct: 250 IMPLIRQIQTAVMPNGTPHPTAAIVPPGPEAGLIYTPYEY 289
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 123/243 (50%), Gaps = 32/243 (13%)
Query: 17 EYVKTLLKEKMTLDSDSHSYTL-----KLLDDEI--------NKAMASNKKKYDSPYLDL 63
+Y+ L+ +K + S + + +LLD+EI N + + +K + D
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDTLNGSTEKRSAELPDA 75
Query: 64 FREKPIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRS 122
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+
Sbjct: 76 V--GPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKK 133
Query: 123 KEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQ 180
KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +++
Sbjct: 134 KEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKK 191
Query: 181 EQFREMGYVHHEPRPQMRHPRPPPHMVAARPAPGLLAPPRMQHAAPPHMVRPPHPPPPPA 240
Q E+ ++ R A +P L A P ++ P P PPA
Sbjct: 192 MQLMELAILNGTYRD------------ANIKSPALAFSLAATAQAAPRIITGPAPVLPPA 239
Query: 241 ASR 243
A R
Sbjct: 240 ALR 242
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 24/222 (10%)
Query: 17 EYVKTLLKEKMTLDS-----DSHSYTLKLLDDEINKAMASNKKKYDSPYLDLFREK---- 67
+Y+ L+ +K + S ++ +LLD+EI++ K Y+ EK
Sbjct: 16 DYLMQLMNDKKLMSSLPNFCGIFTHLERLLDEEISRV---RKDMYNDTMNSSSNEKRTSE 72
Query: 68 ------PIL-VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRD 120
PI+ ++ K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD
Sbjct: 73 LPDGIGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRD 132
Query: 121 RSKEEELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEI 178
+ KEE+ R G P HL EDLHV ++ A ++ A+ E++K ++P + D +
Sbjct: 133 KKKEEQNR--GKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVPAAEGEDSL 190
Query: 179 RQEQFREMGYVHHEPR-PQMRHPRPPPHMVAARPAPGLLAPP 219
++ Q E+ ++ R ++ P + A AP ++ P
Sbjct: 191 KKMQLMELAILNGTYRDANLKSPALAFSLAATGQAPRIITGP 232
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
K+ VPVKE+P FNFVG++LGP+G + ++L+ ET K+ + GKGSMRD+ KEE+ R G P
Sbjct: 85 KLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNR--GKP 142
Query: 134 KNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFREMGYVHH 191
HL EDLHV ++ A ++ A+ E++K ++P + D +++ Q E+ ++
Sbjct: 143 NWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNG 202
Query: 192 EPR-PQMRHPRPPPHMVAARPAPGLLAPPR--MQHAAPPHMVRPPHPPPP 238
R ++ P + A AP ++ P M +AA +R P P P
Sbjct: 203 TYRDANIKSPALAFSLAATAQAPRIMTGPTPVMPNAA----LRTPAPTAP 248
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 79/134 (58%), Gaps = 7/134 (5%)
Query: 73 VKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGD 132
+++ +PV +P FNFVG+LLGP+GNSL+R++ T ++ I GKGS++D KE++LR G
Sbjct: 138 LRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLR--GR 195
Query: 133 PKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFREMGYVH 190
P HL E LH+ + A P + R+ A + + + P + D I+++Q RE+ ++
Sbjct: 196 PGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLN 255
Query: 191 HEPRPQMRHPRPPP 204
+R P P
Sbjct: 256 SN---NLREESPGP 266
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 73 VKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGD 132
++V +PV +P FNFVG+LLGP+GNSL+R++ T ++ I G+GS++D KEE +R G
Sbjct: 168 IRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMR--GK 225
Query: 133 PKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFREMGYVH 190
P HL E LH+ V A P AR+ A L + P + +D +++Q RE+ ++
Sbjct: 226 PGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLN 285
Query: 191 HEPR 194
R
Sbjct: 286 GTLR 289
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 73 VKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGD 132
+++ VPV +P FNFVG++LGP+GNSL+R++ T ++ I GKGS++D KE++LR G
Sbjct: 136 LRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKGSIKDPGKEDKLR--GK 193
Query: 133 PKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFREMGYVH 190
P HL + LH+ + A P + AR+ +A + + + P + D +++Q RE+ ++
Sbjct: 194 PGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQDFYKRQQLRELAMLN 253
Query: 191 HEPRPQMRHP 200
R HP
Sbjct: 254 STLREDSPHP 263
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 80/126 (63%), Gaps = 5/126 (3%)
Query: 68 PILVKVKVL-VPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
PI+ KV L VPV ++P +NFVG++LGP+GNSL+R++ T ++ I G+GS++D KEE+
Sbjct: 143 PIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEK 202
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFR 184
L+ G P HL E LHV + A P ++R+ +A+ L + P + D ++EQ +
Sbjct: 203 LK--GKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLK 260
Query: 185 EMGYVH 190
E+ ++
Sbjct: 261 ELAALN 266
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
Query: 68 PILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEEL 127
P+ +++ +PV +P FNFVG+LLGP+GNSL+R++ T ++ I GKGS++D KEE+L
Sbjct: 132 PVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKL 191
Query: 128 RKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFRE 185
+ G P HL E LH+ + A P ++ A + + + P + D I+++Q RE
Sbjct: 192 K--GKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRE 249
Query: 186 MGYVHHEPR 194
+ ++ R
Sbjct: 250 LALLNSNLR 258
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 79/130 (60%), Gaps = 6/130 (4%)
Query: 69 ILVK--VKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
++VK ++V +PV ++P +NFVG+LLGP+GNSL+R++ T ++ I G+GS++D KE+
Sbjct: 156 LIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDM 215
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFR 184
+R G P HL E LH+ V A P AR+ A L + P + +D +++Q R
Sbjct: 216 MR--GKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLR 273
Query: 185 EMGYVHHEPR 194
E+ ++ R
Sbjct: 274 ELALLNGSLR 283
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 31/184 (16%)
Query: 50 ASNKKKYDSPYLDLFREKPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTK 109
A + K Y SP + KP+ K+ +PVK++P NFVG LLGP+GN+LR+LQE++ +
Sbjct: 144 AGSIKNYMSP---IDYRKPVKTYEKIYIPVKDYPDINFVGLLLGPRGNTLRQLQEDSGAR 200
Query: 110 MSILGKGSMRDRSKEEELRKEGDPK----------NAHLVEDLHVQVSALAPPAEAHARI 159
++I GKGS++D + D N+ +DLHV ++ +++ ++I
Sbjct: 201 LAIRGKGSVKDGKSTSSNNDDDDSNSSLSFSNPNLNSSGNDDLHVVIT-----SDSQSKI 255
Query: 160 AYALSELRKYII------PDVNDEIRQEQFREMGYVHHEPRPQMRHPRP--PPHMVAARP 211
A A+ +L +I P +++++ Q RE+ ++ +R +P P + R
Sbjct: 256 AKAI-KLTNQVIEKAISSPVGQNDLKRGQLRELAILNGT----LRETKPYNPETQQSRRS 310
Query: 212 APGL 215
PGL
Sbjct: 311 RPGL 314
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 76/130 (58%), Gaps = 17/130 (13%)
Query: 67 KPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
+P + KV VPVK++P NF+G L+GP+G++L+ ++ ++ K++I GKGS++ E
Sbjct: 182 RPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKSGAKIAIRGKGSVK------E 235
Query: 127 LRKEGDPK-NAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQ 180
+ DP ++ EDLH V+ A++ +I +A+ + I +P+ +++++
Sbjct: 236 GKGRSDPSVRGNMEEDLHCLVT-----ADSEDKINHAIKLIDNVIQTAASVPEGQNDLKR 290
Query: 181 EQFREMGYVH 190
Q R++ ++
Sbjct: 291 NQLRQLATLN 300
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 74/130 (56%), Gaps = 16/130 (12%)
Query: 67 KPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
+P + K +P+ ++P NFVG LLGP+GN+L++LQ+++ K+ I G+GS+++ +
Sbjct: 145 RPSKFQDKYYIPINDYPEINFVGLLLGPRGNTLKQLQQQSGCKIVIRGRGSVKEGKAATD 204
Query: 127 LRKEGDPKNA-HLVEDLHVQVSALAPPAEAHARIAYALSELRKYII-----PDVNDEIRQ 180
L PK A ++ E LH +S A+ +I ++ + II P+ +++++
Sbjct: 205 L-----PKGAMNMNEPLHCVIS-----ADTEEKIPLGINAVESIIIKAITSPEGQNDLKR 254
Query: 181 EQFREMGYVH 190
Q RE+ ++
Sbjct: 255 GQLRELAVLN 264
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 71/125 (56%), Gaps = 15/125 (12%)
Query: 67 KPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
+P + KV VPV ++P NF+G L+GP+GN+L++++ E+ K++I GKGS+ KE +
Sbjct: 192 RPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMETESGAKIAIRGKGSV----KEGK 247
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQE 181
R + +++ EDLH + A+ ++ A + I IP+ +E+++
Sbjct: 248 GRSDA-AHSSNQEEDLHCLIM-----ADTEEKVNKAKKLIHNIIETAASIPEGQNELKRN 301
Query: 182 QFREM 186
Q RE+
Sbjct: 302 QLREL 306
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 71/121 (58%), Gaps = 19/121 (15%)
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
K+ +P+K HP +NF+G ++GP+GN+ +R+++E+ K++I GKGS RD G P
Sbjct: 182 KIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKESGAKIAIRGKGSSRD----------GKP 231
Query: 134 KNAHLVED--LHVQVSALAPPAEAHARIAYALSELRKYIIP--DVNDEIRQEQFREMGYV 189
E+ LHV ++ A+ ++ A +R+++IP + +E +++Q RE+ +
Sbjct: 232 TKLQFQENDELHVLLT-----ADTVDQLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEM 286
Query: 190 H 190
+
Sbjct: 287 N 287
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 66 EKPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEE 125
++P + K +PV ++P+ NFVG LLGP+G +LR++QE++ K++I G+GS+++
Sbjct: 129 KRPTTFQEKYYIPVSQYPQINFVGLLLGPRGKTLRKMQEDSGCKIAIRGRGSVKEGKTSS 188
Query: 126 ELRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYII-----PDVNDEIRQ 180
+L P + LH + A+ +I + R +I P+ +E+++
Sbjct: 189 DL----PPGAMDFSDPLHCLII-----ADNEEKIENGIKACRNIVIKAVTSPEGQNELKR 239
Query: 181 EQFREM----GYVHHEPRP 195
Q RE+ G + + RP
Sbjct: 240 GQLRELAELNGTLREDNRP 258
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 17/130 (13%)
Query: 67 KPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
+P + KV VPV ++P NF+G L+GP+GN+L++++ E+ K++I GKGS++ E
Sbjct: 177 RPTKTQEKVYVPVNDYPEINFIGLLIGPRGNTLKKMEAESGAKIAIRGKGSVK------E 230
Query: 127 LRKEGDPKNA-HLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQ 180
+ D +A + EDLH + A+ ++ A + I IP+ +E+++
Sbjct: 231 GKGRSDAAHASNQEEDLHCLIM-----ADTEEKVNKAKKLVHNVIETAASIPEGQNELKR 285
Query: 181 EQFREMGYVH 190
Q RE+ ++
Sbjct: 286 NQLRELAALN 295
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 39 KLLDDE----INKAMASNKKKYDSPYLDLFREKPILVKVKVLVPVKEHPRFNFVGKLLGP 94
K L+DE I++A+ S+ P +D ++ + KV +PVKE P NF G L+GP
Sbjct: 212 KKLEDERTRLIDRAVKSDPNF--RPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGP 269
Query: 95 KGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKNAHLVEDLHVQVSALAPPAE 154
+GNSL++++ E+ K+SI GKGS+ KEG + + +D ++ L A+
Sbjct: 270 RGNSLKKMERESGAKISIRGKGSV----------KEGKGRAGNFPQDEEDELHCLI-TAD 318
Query: 155 AHARIAYALSELRKYI-----IPDVNDEIRQEQFREMGYVH 190
+++ ++ + K I P+ ++ ++ Q RE+ ++
Sbjct: 319 DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLN 359
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 22/161 (13%)
Query: 39 KLLDDE----INKAMASNKKKYDSPYLDLFREKPILVKVKVLVPVKEHPRFNFVGKLLGP 94
K L+DE I++A+ S+ P +D ++ + KV +PVKE P NF G L+GP
Sbjct: 212 KKLEDERTRLIDRAVKSDPNF--RPPVDFQHKRGSRPQDKVYIPVKEFPEINFFGLLVGP 269
Query: 95 KGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDPKNAHLVEDLHVQVSALAPPAE 154
+GNSL++++ E+ K+SI GKGS+ KEG + + +D ++ L A+
Sbjct: 270 RGNSLKKMERESGAKISIRGKGSV----------KEGKGRAGNFPQDEEDELHCLI-TAD 318
Query: 155 AHARIAYALSELRKYI-----IPDVNDEIRQEQFREMGYVH 190
+++ ++ + K I P+ ++ ++ Q RE+ ++
Sbjct: 319 DESKVKTCVALINKVIETAASTPEGENDHKRNQLRELASLN 359
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 15/129 (11%)
Query: 67 KPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEE 126
KP + V +PV E+P NF+G+LLG +G +L+++++E+ K+ I G+GS++ +
Sbjct: 175 KPAKTQEVVYIPVNEYPDINFIGQLLGARGKTLKKMEQESGAKICIRGRGSVKQGKGRTD 234
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQE 181
+ P + +DLH + +E +IA A+ +++ I +P+ +E+++
Sbjct: 235 I-----PFQSTAEDDLHCLII-----SEDEEKIARAVQLVQQVIDTAASVPEGQNELKRS 284
Query: 182 QFREMGYVH 190
Q RE+ ++
Sbjct: 285 QLRELAALN 293
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 20/140 (14%)
Query: 66 EKPILVKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEE 125
++P + K +PV ++P NFVG LLGP+G +LR+LQE++ K++I G+GS+++
Sbjct: 143 KRPTKFQDKYYIPVDQYPDVNFVGLLLGPRGRTLRKLQEDSNCKIAIRGRGSVKEGKNAS 202
Query: 126 ELRKEGDPKNAHLVED-LHVQVSALAPPAEAHARIAYALSELRKYII-----PDVNDEIR 179
+L P A ED LH + A++ +I + + +I P+ ++++
Sbjct: 203 DL-----PPGAMNFEDPLHCLII-----ADSEDKIQKGIKVCQNIVIKAVTSPEGQNDLK 252
Query: 180 QEQFREM----GYVHHEPRP 195
+ Q RE+ G + + RP
Sbjct: 253 RGQLRELAELNGTLREDNRP 272
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
++ VPVK++P NFVG L+GP+GN+L++LQE++ ++ I GKGS+++ +
Sbjct: 151 RLYVPVKDYPDINFVGFLIGPRGNTLKKLQEDSGARLQIRGKGSVKEGKSSDGF--GSSQ 208
Query: 134 KNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYII--PDVNDEIRQEQFREMGYVHH 191
+ +DLHV ++A +P + A ++E+ +I P + ++++Q +E+ ++
Sbjct: 209 TGTDIQDDLHVLITADSPLKISKA--VKLVNEIIDKLIFSPQGMNFMKRDQLKELAVLNG 266
Query: 192 EPR 194
R
Sbjct: 267 TLR 269
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 22/129 (17%)
Query: 71 VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRD----RSKEEE 126
V KV++P E+P NFVG L+GP+GN+L+ +++E K+ I GKGS+++ R +
Sbjct: 136 VSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQM 195
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQE 181
L E +P LH V+ A + A+ ++R + P+ +++R+
Sbjct: 196 LPGEDEP--------LHALVT-----ANTMENVKKAVEQIRNILKQGIETPEDQNDLRKM 242
Query: 182 QFREMGYVH 190
Q RE+ ++
Sbjct: 243 QLRELARLN 251
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 22/129 (17%)
Query: 71 VKVKVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRD----RSKEEE 126
V KV++P E+P NFVG L+GP+GN+L+ +++E K+ I GKGS+++ R +
Sbjct: 136 VSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQM 195
Query: 127 LRKEGDPKNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQE 181
L E +P LH V+ A + A+ ++R + P+ +++R+
Sbjct: 196 LPGEDEP--------LHALVT-----ANTMENVKKAVEQIRNILKQGIETPEDQNDLRKM 242
Query: 182 QFREMGYVH 190
Q RE+ ++
Sbjct: 243 QLRELARLN 251
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 74 KVLVPVKEHPRFNFVGKLLGPKGNSLRRLQEETMTKMSILGKGSMRDRSKEEELRKEGDP 133
KV +P+KE P F G L+GP+GN+L+ ++ ++ K+SI GKGS++ + + ++
Sbjct: 251 KVYLPIKEFPEIKFFGLLVGPRGNTLKTMERQSGAKISIRGKGSVKTGKGKMDADED--- 307
Query: 134 KNAHLVEDLHVQVSALAPPAEAHARIAYALSELRKYI-----IPDVNDEIRQEQFREMGY 188
E++H V+ A+ A + + + + I P+ ++ ++ Q RE+
Sbjct: 308 -----EEEMHCVVT-----ADDEASVKKCIKLINQVIETAASTPEGENDHKRNQLRELAA 357
Query: 189 VH 190
++
Sbjct: 358 LN 359
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 249 ILDRARAAMEKPA----------PSAGVYEYEDPHAAHAYYETTASYDPAMYDPYASTAG 298
+L +R+A+ +P P G + P AAH PYA G
Sbjct: 358 LLGPSRSAVARPPRPGPFLPSQEPGMGPRHHRFPRAAHPRAPGEQQRLAGAQHPYAQGWG 417
Query: 299 DYYDTSASYYETAAPAPL----PSTSSRTGGSGWKSSSGYAEHHSSSRSKSSAPIRSSSS 354
+ S S + A P PL P SS +G S SGY +S S SS P SSS
Sbjct: 418 LSHLQSTSQHPAACPVPLRRARPPDSSGSGESYCTERSGYLADGPASDS-SSGPCHGSSS 476
Query: 355 EKVVNASLVGLQG 367
+ VVN + + LQG
Sbjct: 477 DSVVNCTDISLQG 489
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,294,213
Number of Sequences: 539616
Number of extensions: 7584828
Number of successful extensions: 48645
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 920
Number of HSP's that attempted gapping in prelim test: 35710
Number of HSP's gapped (non-prelim): 8554
length of query: 402
length of database: 191,569,459
effective HSP length: 120
effective length of query: 282
effective length of database: 126,815,539
effective search space: 35761981998
effective search space used: 35761981998
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)