Query psy12972
Match_columns 1578
No_of_seqs 1109 out of 8268
Neff 6.9
Searched_HMMs 46136
Date Fri Aug 16 15:51:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12972.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12972hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1235|consensus 100.0 1.4E-65 3E-70 625.5 23.6 293 274-626 77-372 (538)
2 COG0661 AarF Predicted unusual 100.0 3.2E-63 6.9E-68 609.2 27.3 316 284-667 51-370 (517)
3 PRK04750 ubiB putative ubiquin 100.0 2.5E-55 5.4E-60 543.6 27.2 308 289-666 50-368 (537)
4 TIGR01982 UbiB 2-polyprenylphe 100.0 6.7E-52 1.4E-56 509.3 29.0 310 289-666 48-361 (437)
5 KOG1236|consensus 100.0 3.8E-42 8.2E-47 392.5 13.5 280 290-615 120-446 (565)
6 KOG4277|consensus 100.0 5.9E-40 1.3E-44 355.6 22.1 355 869-1269 39-411 (468)
7 KOG0190|consensus 100.0 3E-32 6.5E-37 326.5 24.9 334 853-1226 25-363 (493)
8 COG0661 AarF Predicted unusual 100.0 1.2E-33 2.6E-38 348.2 9.5 145 83-227 51-202 (517)
9 KOG1235|consensus 100.0 3.9E-32 8.5E-37 332.6 6.4 144 72-215 76-223 (538)
10 PRK04750 ubiB putative ubiquin 100.0 3.4E-31 7.4E-36 328.9 12.4 175 46-220 3-187 (537)
11 TIGR01982 UbiB 2-polyprenylphe 100.0 6E-31 1.3E-35 324.0 11.9 173 47-219 1-183 (437)
12 KOG1234|consensus 100.0 1.8E-29 3.9E-34 275.8 6.4 214 369-584 15-232 (363)
13 PF03109 ABC1: ABC1 family; I 99.9 1.4E-27 3.1E-32 242.2 8.4 117 393-509 1-119 (119)
14 TIGR01130 ER_PDI_fam protein d 99.9 7.4E-25 1.6E-29 273.9 28.1 395 855-1367 3-409 (462)
15 KOG0190|consensus 99.9 7.1E-26 1.5E-30 271.9 7.4 101 857-962 370-473 (493)
16 KOG1236|consensus 99.9 2.1E-24 4.6E-29 247.8 11.8 130 87-216 118-272 (565)
17 PTZ00102 disulphide isomerase; 99.9 1.4E-22 3E-27 254.9 27.3 316 855-1224 34-353 (477)
18 KOG0191|consensus 99.9 2.5E-22 5.4E-27 245.0 11.3 186 763-964 45-254 (383)
19 KOG0713|consensus 99.8 1.7E-20 3.6E-25 212.6 8.6 153 633-806 12-166 (336)
20 COG0484 DnaJ DnaJ-class molecu 99.8 1.4E-20 3E-25 219.5 8.2 98 635-734 2-100 (371)
21 KOG0912|consensus 99.8 1E-17 2.3E-22 184.9 20.2 313 858-1205 1-323 (375)
22 PF01216 Calsequestrin: Calseq 99.7 3.5E-16 7.6E-21 177.0 27.2 323 855-1206 36-373 (383)
23 PTZ00102 disulphide isomerase; 99.7 3.1E-16 6.7E-21 197.5 26.8 396 747-1205 34-469 (477)
24 KOG4277|consensus 99.7 3.6E-17 7.8E-22 179.1 10.4 284 758-1073 36-350 (468)
25 cd03006 PDI_a_EFP1_N PDIa fami 99.7 2.7E-17 5.8E-22 165.4 8.2 102 855-958 11-113 (113)
26 TIGR01130 ER_PDI_fam protein d 99.7 3.2E-15 6.9E-20 187.3 25.7 402 748-1205 4-458 (462)
27 cd05147 RIO1_euk RIO kinase fa 99.7 7.1E-16 1.5E-20 170.3 13.9 157 409-584 3-164 (190)
28 cd03003 PDI_a_ERdj5_N PDIa fam 99.6 2.2E-16 4.9E-21 156.0 8.2 99 855-958 3-101 (101)
29 cd05145 RIO1_like RIO kinase f 99.6 7.3E-16 1.6E-20 170.3 11.8 157 409-584 3-164 (190)
30 KOG0712|consensus 99.6 6.9E-16 1.5E-20 178.1 9.2 69 636-706 3-71 (337)
31 PF03109 ABC1: ABC1 family; I 99.6 4.7E-17 1E-21 165.4 -0.8 68 147-214 1-72 (119)
32 cd03007 PDI_a_ERp29_N PDIa fam 99.6 7.5E-16 1.6E-20 154.2 7.4 98 855-961 3-115 (116)
33 PF00085 Thioredoxin: Thioredo 99.6 1.3E-15 2.7E-20 150.2 8.4 102 856-961 2-103 (103)
34 PRK14296 chaperone protein Dna 99.6 6.9E-16 1.5E-20 186.2 7.9 69 636-704 3-71 (372)
35 cd03004 PDI_a_ERdj5_C PDIa fam 99.6 1.2E-15 2.6E-20 151.5 7.6 100 855-958 3-104 (104)
36 cd02996 PDI_a_ERp44 PDIa famil 99.6 1.7E-15 3.8E-20 151.6 7.8 100 855-958 3-108 (108)
37 PRK14288 chaperone protein Dna 99.6 1E-15 2.3E-20 184.7 7.0 98 636-735 2-100 (369)
38 cd02963 TRX_DnaJ TRX domain, D 99.6 2E-15 4.4E-20 152.0 7.9 103 857-960 8-110 (111)
39 TIGR02187 GlrX_arch Glutaredox 99.6 1.5E-15 3.2E-20 171.0 7.5 175 765-960 19-214 (215)
40 cd03065 PDI_b_Calsequestrin_N 99.6 2.8E-15 6.1E-20 151.9 8.6 105 854-962 10-119 (120)
41 KOG0910|consensus 99.6 2.1E-15 4.5E-20 154.5 7.1 103 857-963 47-149 (150)
42 cd02994 PDI_a_TMX PDIa family, 99.6 5.7E-15 1.2E-19 145.8 9.0 99 855-960 3-101 (101)
43 COG3118 Thioredoxin domain-con 99.6 3.6E-15 7.8E-20 167.6 7.9 108 855-964 25-132 (304)
44 PRK14287 chaperone protein Dna 99.6 3.5E-15 7.6E-20 180.2 7.4 95 636-734 3-97 (371)
45 PRK14298 chaperone protein Dna 99.6 3.9E-15 8.6E-20 180.0 7.8 98 636-734 4-101 (377)
46 PRK14276 chaperone protein Dna 99.6 4.2E-15 9.1E-20 180.3 7.8 99 636-734 3-105 (380)
47 PRK14299 chaperone protein Dna 99.6 4.7E-15 1E-19 173.8 7.8 99 636-734 3-107 (291)
48 KOG0717|consensus 99.5 1.6E-15 3.4E-20 176.4 3.4 72 633-704 4-77 (508)
49 PRK14286 chaperone protein Dna 99.5 4.4E-15 9.6E-20 179.5 7.3 99 636-734 3-105 (372)
50 KOG0191|consensus 99.5 8.9E-14 1.9E-18 170.1 17.9 208 858-1076 34-254 (383)
51 PTZ00443 Thioredoxin domain-co 99.5 1.3E-14 2.8E-19 162.5 8.1 107 854-962 31-139 (224)
52 cd03002 PDI_a_MPD1_like PDI fa 99.5 2.2E-14 4.8E-19 143.5 8.9 101 855-959 2-109 (109)
53 PRK14278 chaperone protein Dna 99.5 1.2E-14 2.6E-19 176.0 7.9 95 637-734 3-97 (378)
54 PRK14285 chaperone protein Dna 99.5 1.1E-14 2.4E-19 175.6 7.0 98 637-734 3-105 (365)
55 PRK14301 chaperone protein Dna 99.5 1.3E-14 2.8E-19 175.5 7.3 98 636-735 3-103 (373)
56 PRK14294 chaperone protein Dna 99.5 1.3E-14 2.9E-19 175.3 7.4 99 636-735 3-102 (366)
57 PRK14280 chaperone protein Dna 99.5 1.5E-14 3.2E-19 175.3 7.6 70 636-705 3-72 (376)
58 PRK14297 chaperone protein Dna 99.5 1.9E-14 4E-19 174.9 7.5 70 636-705 3-73 (380)
59 cd02993 PDI_a_APS_reductase PD 99.5 3.7E-14 8E-19 142.4 7.8 103 855-958 3-109 (109)
60 PRK14282 chaperone protein Dna 99.5 3.4E-14 7.4E-19 171.9 8.3 70 636-705 3-74 (369)
61 PRK14291 chaperone protein Dna 99.5 2.9E-14 6.2E-19 173.2 7.5 70 636-705 2-71 (382)
62 cd03005 PDI_a_ERp46 PDIa famil 99.5 4.4E-14 9.6E-19 139.3 7.4 99 855-958 2-102 (102)
63 PRK14279 chaperone protein Dna 99.5 2.7E-14 5.8E-19 173.7 7.0 68 636-703 8-76 (392)
64 KOG1234|consensus 99.5 1.5E-14 3.2E-19 159.7 3.8 95 111-205 2-101 (363)
65 cd03001 PDI_a_P5 PDIa family, 99.5 7.4E-14 1.6E-18 138.0 8.4 100 855-958 2-102 (103)
66 PRK14277 chaperone protein Dna 99.5 3.9E-14 8.5E-19 172.2 7.7 70 636-705 4-74 (386)
67 cd02956 ybbN ybbN protein fami 99.5 9.8E-14 2.1E-18 135.6 8.3 95 862-959 2-96 (96)
68 TIGR02349 DnaJ_bact chaperone 99.5 5.8E-14 1.3E-18 169.5 7.7 97 638-734 1-100 (354)
69 PRK10767 chaperone protein Dna 99.5 7.8E-14 1.7E-18 169.2 8.1 70 636-705 3-73 (371)
70 PTZ00037 DnaJ_C chaperone prot 99.4 4.9E-14 1.1E-18 171.7 5.9 67 636-705 27-93 (421)
71 PRK14283 chaperone protein Dna 99.4 8.9E-14 1.9E-18 168.8 7.9 70 636-705 4-73 (378)
72 PRK09381 trxA thioredoxin; Pro 99.4 2.5E-13 5.5E-18 136.1 9.2 104 855-962 5-108 (109)
73 PRK14284 chaperone protein Dna 99.4 1.2E-13 2.7E-18 168.1 8.3 69 637-705 1-70 (391)
74 cd02999 PDI_a_ERp44_like PDIa 99.4 1.8E-13 3.9E-18 135.2 7.9 84 871-958 16-100 (100)
75 KOG1163|consensus 99.4 2.7E-13 5.8E-18 146.9 9.7 134 409-588 21-165 (341)
76 cd02995 PDI_a_PDI_a'_C PDIa fa 99.4 2.4E-13 5.1E-18 134.4 8.6 100 855-958 2-104 (104)
77 PRK10359 lipopolysaccharide co 99.4 4.8E-13 1E-17 150.4 11.8 134 409-583 37-180 (232)
78 PHA02278 thioredoxin-like prot 99.4 1.8E-13 3.9E-18 135.6 7.1 93 860-957 4-100 (103)
79 TIGR01126 pdi_dom protein disu 99.4 3.5E-13 7.6E-18 132.6 9.0 100 858-961 1-101 (102)
80 KOG0719|consensus 99.4 4.4E-14 9.5E-19 151.6 1.8 121 635-776 12-135 (264)
81 PRK10266 curved DNA-binding pr 99.4 1.7E-13 3.7E-18 161.9 6.7 69 636-704 3-71 (306)
82 cd02997 PDI_a_PDIR PDIa family 99.4 4E-13 8.8E-18 132.9 7.9 100 855-958 2-104 (104)
83 PRK14300 chaperone protein Dna 99.4 1.7E-13 3.7E-18 165.9 6.3 69 637-705 3-71 (372)
84 PRK14295 chaperone protein Dna 99.4 3.4E-13 7.3E-18 164.0 8.0 69 636-704 8-81 (389)
85 PRK14292 chaperone protein Dna 99.4 2.8E-13 6E-18 164.4 7.2 69 637-705 2-70 (371)
86 TIGR02187 GlrX_arch Glutaredox 99.4 4.5E-12 9.8E-17 142.9 16.4 186 873-1071 19-213 (215)
87 PRK14281 chaperone protein Dna 99.4 3.1E-13 6.8E-18 164.8 7.4 69 637-705 3-72 (397)
88 PRK14290 chaperone protein Dna 99.4 3.7E-13 8E-18 162.8 7.8 69 637-705 3-73 (365)
89 smart00090 RIO RIO-like kinase 99.4 1.5E-12 3.2E-17 148.9 11.8 154 409-584 34-195 (237)
90 cd02948 TRX_NDPK TRX domain, T 99.4 6.5E-13 1.4E-17 131.8 7.6 97 858-960 5-101 (102)
91 PRK14293 chaperone protein Dna 99.4 3.9E-13 8.4E-18 163.1 7.1 69 637-705 3-71 (374)
92 KOG0716|consensus 99.4 2.8E-13 6.2E-18 149.5 4.5 73 633-705 27-100 (279)
93 PLN02309 5'-adenylylsulfate re 99.4 7.3E-13 1.6E-17 162.0 8.5 107 854-961 346-456 (457)
94 cd02998 PDI_a_ERp38 PDIa famil 99.4 1.5E-12 3.2E-17 128.9 9.1 100 856-958 3-105 (105)
95 KOG0721|consensus 99.4 8.5E-13 1.8E-17 141.1 7.6 94 613-706 71-169 (230)
96 cd03000 PDI_a_TMX3 PDIa family 99.4 1.6E-12 3.5E-17 129.3 9.0 95 861-961 7-103 (104)
97 KOG0624|consensus 99.4 9E-13 2E-17 148.3 7.9 72 633-704 390-465 (504)
98 PRK10996 thioredoxin 2; Provis 99.4 1.2E-12 2.6E-17 137.3 8.4 102 855-961 37-138 (139)
99 cd02954 DIM1 Dim1 family; Dim1 99.4 8.5E-13 1.8E-17 132.0 6.9 91 861-954 3-93 (114)
100 TIGR00424 APS_reduc 5'-adenyly 99.4 9.3E-13 2E-17 161.0 8.7 106 854-960 352-461 (463)
101 PF01163 RIO1: RIO1 family; I 99.4 1.4E-12 2.9E-17 143.2 8.5 142 419-584 2-153 (188)
102 cd05119 RIO RIO kinase family, 99.4 4.2E-12 9.1E-17 139.3 12.4 153 409-586 3-163 (187)
103 PF00226 DnaJ: DnaJ domain; I 99.3 5.3E-13 1.1E-17 120.7 4.2 62 638-699 1-64 (64)
104 TIGR01068 thioredoxin thioredo 99.3 2.2E-12 4.7E-17 126.5 8.5 100 859-962 2-101 (101)
105 KOG0595|consensus 99.3 2.3E-12 5E-17 149.8 10.0 134 409-584 16-162 (429)
106 PTZ00341 Ring-infected erythro 99.3 7.5E-13 1.6E-17 166.6 5.5 71 635-705 571-641 (1136)
107 KOG0715|consensus 99.3 1.2E-12 2.6E-17 152.2 6.4 72 634-705 40-111 (288)
108 cd02961 PDI_a_family Protein D 99.3 2.2E-12 4.7E-17 125.8 7.1 98 857-958 2-101 (101)
109 cd02965 HyaE HyaE family; HyaE 99.3 3.2E-12 7E-17 127.0 8.2 94 857-955 14-109 (111)
110 PRK14289 chaperone protein Dna 99.3 1.9E-12 4.1E-17 157.9 7.7 70 636-705 4-74 (386)
111 cd02985 TRX_CDSP32 TRX family, 99.3 2.8E-12 6.2E-17 127.4 7.5 96 859-959 2-100 (103)
112 KOG0574|consensus 99.3 5.6E-13 1.2E-17 147.5 2.6 139 388-574 20-163 (502)
113 KOG0691|consensus 99.3 1.5E-12 3.3E-17 149.5 5.6 71 636-706 4-75 (296)
114 cd05144 RIO2_C RIO kinase fami 99.3 1.3E-11 2.8E-16 137.2 12.9 150 408-584 20-172 (198)
115 cd02957 Phd_like Phosducin (Ph 99.3 3E-12 6.5E-17 129.5 6.5 89 855-947 6-94 (113)
116 cd02962 TMX2 TMX2 family; comp 99.3 3.7E-12 7.9E-17 134.8 7.3 92 855-947 30-126 (152)
117 KOG1731|consensus 99.3 4.5E-12 9.8E-17 152.2 8.2 222 854-1083 40-285 (606)
118 PRK14879 serine/threonine prot 99.3 2.3E-11 5.1E-16 136.1 12.5 138 409-584 2-141 (211)
119 cd05146 RIO3_euk RIO kinase fa 99.3 3E-11 6.6E-16 133.1 12.2 150 409-583 3-170 (197)
120 KOG0718|consensus 99.2 4.6E-12 9.9E-17 147.7 5.6 72 636-707 8-83 (546)
121 cd02992 PDI_a_QSOX PDIa family 99.2 1.5E-11 3.3E-16 124.6 8.4 84 855-941 3-90 (114)
122 cd02984 TRX_PICOT TRX domain, 99.2 1.8E-11 3.9E-16 119.8 6.8 95 860-958 2-96 (97)
123 KOG0907|consensus 99.2 3.6E-11 7.8E-16 119.4 8.5 85 872-960 20-104 (106)
124 PLN00410 U5 snRNP protein, DIM 99.2 2.8E-11 6E-16 125.7 7.7 100 859-961 10-119 (142)
125 cd02953 DsbDgamma DsbD gamma f 99.2 2.3E-11 4.9E-16 121.0 6.8 87 871-959 9-104 (104)
126 COG1718 RIO1 Serine/threonine 99.2 1.7E-10 3.7E-15 128.6 13.8 152 410-583 55-212 (268)
127 KOG0661|consensus 99.2 2.3E-11 5E-16 143.4 6.9 139 410-588 17-161 (538)
128 cd02989 Phd_like_TxnDC9 Phosdu 99.2 3.3E-11 7.1E-16 121.9 7.1 85 857-947 8-93 (113)
129 PF13848 Thioredoxin_6: Thiore 99.2 6.1E-10 1.3E-14 121.9 17.7 182 993-1199 1-184 (184)
130 TIGR03724 arch_bud32 Kae1-asso 99.2 1.2E-10 2.6E-15 129.2 12.1 133 411-584 2-136 (199)
131 smart00271 DnaJ DnaJ molecular 99.1 3E-11 6.4E-16 107.8 4.6 57 637-693 1-59 (60)
132 cd06257 DnaJ DnaJ domain or J- 99.1 4.6E-11 9.9E-16 104.5 5.5 54 638-691 1-55 (55)
133 KOG1731|consensus 99.1 3.3E-11 7.3E-16 144.9 6.0 192 747-962 41-269 (606)
134 cd02949 TRX_NTR TRX domain, no 99.1 1.1E-10 2.4E-15 114.7 8.5 86 872-959 12-97 (97)
135 KOG4236|consensus 99.1 9.1E-11 2E-15 138.2 8.9 147 397-584 558-714 (888)
136 cd02950 TxlA TRX-like protein 99.1 1.1E-10 2.3E-15 123.0 8.4 97 861-962 11-110 (142)
137 KOG0912|consensus 99.1 1.1E-10 2.4E-15 130.0 8.5 212 754-997 5-238 (375)
138 cd02987 Phd_like_Phd Phosducin 99.1 1.2E-10 2.5E-15 126.8 8.6 87 855-945 64-151 (175)
139 KOG4250|consensus 99.1 8.6E-11 1.9E-15 144.6 7.9 129 403-572 13-152 (732)
140 cd02983 P5_C P5 family, C-term 99.1 4.1E-10 8.8E-15 116.5 11.5 114 1076-1206 2-120 (130)
141 TIGR03835 termin_org_DnaJ term 99.1 8E-11 1.7E-15 145.8 7.3 69 637-705 2-70 (871)
142 PTZ00051 thioredoxin; Provisio 99.1 9.1E-11 2E-15 115.1 6.2 89 860-955 8-96 (98)
143 PHA03102 Small T antigen; Revi 99.1 6.3E-11 1.4E-15 124.0 5.4 67 637-706 5-73 (153)
144 KOG0581|consensus 99.1 3E-10 6.4E-15 131.6 10.9 136 409-588 85-230 (364)
145 KOG0605|consensus 99.1 3.6E-10 7.7E-15 135.6 11.8 132 409-583 147-287 (550)
146 cd02986 DLP Dim1 family, Dim1- 99.1 1E-10 2.2E-15 116.1 5.9 79 861-942 3-81 (114)
147 cd02947 TRX_family TRX family; 99.1 2.7E-10 5.9E-15 108.7 8.1 91 862-958 2-92 (93)
148 cd05151 ChoK Choline Kinase (C 99.1 4.4E-10 9.5E-15 121.1 10.2 124 409-584 4-134 (170)
149 KOG0615|consensus 99.1 4.4E-10 9.5E-15 130.8 10.1 140 408-584 177-326 (475)
150 cd05085 PTKc_Fer Catalytic dom 99.1 9.1E-10 2E-14 125.9 12.6 136 409-585 1-141 (250)
151 cd03006 PDI_a_EFP1_N PDIa fami 99.0 4.2E-11 9E-16 120.7 1.2 82 747-841 11-95 (113)
152 KOG0722|consensus 99.0 1.1E-10 2.3E-15 126.6 4.3 70 634-703 30-99 (329)
153 PF06176 WaaY: Lipopolysacchar 99.0 1.1E-09 2.4E-14 121.2 12.0 95 484-585 83-182 (229)
154 cd02982 PDI_b'_family Protein 99.0 5.3E-10 1.2E-14 110.6 8.5 87 873-961 12-102 (103)
155 KOG0667|consensus 99.0 6.7E-10 1.4E-14 136.7 10.8 136 409-584 192-338 (586)
156 PRK09188 serine/threonine prot 99.0 8E-10 1.7E-14 133.2 11.3 130 409-584 24-159 (365)
157 KOG0908|consensus 99.0 6.8E-10 1.5E-14 121.1 7.5 101 859-964 8-108 (288)
158 KOG0192|consensus 99.0 2.4E-09 5.2E-14 129.2 12.9 138 411-588 49-195 (362)
159 KOG0583|consensus 99.0 3E-09 6.5E-14 129.2 13.4 154 409-605 23-184 (370)
160 cd02988 Phd_like_VIAF Phosduci 99.0 7.6E-10 1.6E-14 122.0 7.4 98 855-958 84-188 (192)
161 cd02975 PfPDO_like_N Pyrococcu 99.0 8.9E-10 1.9E-14 111.5 7.3 89 871-962 20-110 (113)
162 cd05084 PTKc_Fes Catalytic dom 99.0 3.1E-09 6.7E-14 121.8 12.5 136 409-585 1-142 (252)
163 cd05600 STKc_Sid2p_Dbf2p Catal 99.0 3E-09 6.4E-14 127.8 12.4 138 409-586 7-150 (333)
164 KOG0593|consensus 98.9 2.2E-09 4.7E-14 120.6 9.5 130 410-585 9-149 (396)
165 COG2214 CbpA DnaJ-class molecu 98.9 1E-09 2.3E-14 123.4 7.2 68 635-702 4-73 (237)
166 cd05571 STKc_PKB Catalytic dom 98.9 4.2E-09 9.2E-14 126.0 12.3 136 410-585 2-143 (323)
167 cd05614 STKc_MSK2_N N-terminal 98.9 5.1E-09 1.1E-13 125.7 12.8 140 409-586 6-154 (332)
168 cd05593 STKc_PKB_gamma Catalyt 98.9 4.7E-09 1E-13 126.1 12.5 135 410-585 2-143 (328)
169 cd05096 PTKc_DDR1 Catalytic do 98.9 5E-09 1.1E-13 123.9 12.6 137 409-586 11-187 (304)
170 cd05604 STKc_SGK3 Catalytic do 98.9 5.7E-09 1.2E-13 125.0 12.9 137 410-585 2-144 (325)
171 cd05590 STKc_nPKC_eta Catalyti 98.9 5E-09 1.1E-13 125.3 12.2 136 410-585 2-144 (320)
172 cd05591 STKc_nPKC_epsilon Cata 98.9 5.8E-09 1.3E-13 124.7 12.8 136 410-585 2-144 (321)
173 cd05626 STKc_LATS2 Catalytic d 98.9 6E-09 1.3E-13 127.7 12.9 136 409-584 7-148 (381)
174 cd05594 STKc_PKB_alpha Catalyt 98.9 7.2E-09 1.6E-13 124.1 13.3 134 410-584 2-143 (325)
175 cd05627 STKc_NDR2 Catalytic do 98.9 3.8E-09 8.3E-14 128.4 10.9 135 409-585 7-149 (360)
176 cd05628 STKc_NDR1 Catalytic do 98.9 6.4E-09 1.4E-13 126.6 12.8 135 409-585 7-149 (363)
177 cd05598 STKc_LATS Catalytic do 98.9 7E-09 1.5E-13 126.8 13.1 135 409-584 7-148 (376)
178 COG3642 Mn2+-dependent serine/ 98.9 8.4E-09 1.8E-13 110.3 11.8 135 409-584 2-138 (204)
179 cd05602 STKc_SGK1 Catalytic do 98.9 7.2E-09 1.6E-13 124.1 12.8 137 410-585 2-144 (325)
180 KOG0577|consensus 98.9 2E-09 4.3E-14 128.8 7.6 146 396-584 21-173 (948)
181 cd05575 STKc_SGK Catalytic dom 98.9 7.4E-09 1.6E-13 123.9 12.7 137 410-585 2-144 (323)
182 COG0478 RIO-like serine/threon 98.9 7.6E-09 1.6E-13 116.5 11.6 148 409-582 97-247 (304)
183 cd05597 STKc_DMPK_like Catalyt 98.9 4.4E-09 9.5E-14 126.4 10.6 137 409-586 7-151 (331)
184 TIGR01295 PedC_BrcD bacterioci 98.9 2.1E-09 4.6E-14 110.1 6.5 96 857-959 10-121 (122)
185 PLN00034 mitogen-activated pro 98.9 6.9E-09 1.5E-13 125.8 12.0 132 409-586 80-217 (353)
186 cd05592 STKc_nPKC_theta_delta 98.9 8.5E-09 1.8E-13 123.1 12.6 136 410-585 2-144 (316)
187 cd05102 PTKc_VEGFR3 Catalytic 98.9 5.9E-09 1.3E-13 125.4 11.3 138 409-586 13-223 (338)
188 KOG0594|consensus 98.9 7.1E-09 1.5E-13 120.2 11.3 143 401-585 11-168 (323)
189 cd05603 STKc_SGK2 Catalytic do 98.9 9E-09 2E-13 123.0 12.7 137 410-585 2-144 (321)
190 cd05587 STKc_cPKC Catalytic do 98.9 9.1E-09 2E-13 123.2 12.6 136 409-585 6-149 (324)
191 cd05620 STKc_nPKC_delta Cataly 98.9 8.5E-09 1.8E-13 123.1 12.3 135 410-585 2-144 (316)
192 TIGR00411 redox_disulf_1 small 98.9 6.6E-09 1.4E-13 98.3 8.9 80 876-961 2-81 (82)
193 KOG1165|consensus 98.9 5.5E-09 1.2E-13 118.6 9.7 132 409-586 34-178 (449)
194 cd05573 STKc_ROCK_NDR_like Cat 98.9 6.1E-09 1.3E-13 125.7 10.8 136 409-586 7-150 (350)
195 cd05599 STKc_NDR_like Catalyti 98.9 6.4E-09 1.4E-13 126.4 11.1 138 409-586 7-150 (364)
196 PTZ00263 protein kinase A cata 98.9 8.1E-09 1.8E-13 124.0 11.8 137 409-585 24-166 (329)
197 cd05595 STKc_PKB_beta Catalyti 98.9 8.8E-09 1.9E-13 123.3 12.0 136 410-585 2-143 (323)
198 cd05617 STKc_aPKC_zeta Catalyt 98.9 1.2E-08 2.5E-13 122.5 13.0 136 409-585 1-144 (327)
199 cd05585 STKc_YPK1_like Catalyt 98.9 1.3E-08 2.7E-13 121.3 13.2 134 411-585 1-141 (312)
200 cd05624 STKc_MRCK_beta Catalyt 98.9 1.2E-08 2.5E-13 122.7 12.9 139 409-586 7-151 (331)
201 cd05615 STKc_cPKC_alpha Cataly 98.9 1E-08 2.2E-13 122.9 12.3 136 409-585 6-149 (323)
202 cd05616 STKc_cPKC_beta Catalyt 98.9 1.2E-08 2.6E-13 122.1 12.9 137 409-585 6-149 (323)
203 cd07878 STKc_p38beta_MAPK11 Ca 98.9 6.3E-09 1.4E-13 125.5 10.4 136 409-586 21-167 (343)
204 cd05115 PTKc_Zap-70 Catalytic 98.9 1.2E-08 2.6E-13 117.8 12.1 134 411-586 3-144 (257)
205 KOG0550|consensus 98.9 2.2E-09 4.7E-14 124.8 5.7 72 633-704 369-442 (486)
206 cd05601 STKc_CRIK Catalytic do 98.9 1.2E-08 2.6E-13 122.4 12.3 137 409-585 7-150 (330)
207 cd05631 STKc_GRK4 Catalytic do 98.9 1.4E-08 3.1E-13 119.1 12.7 139 409-586 6-151 (285)
208 cd00180 PKc Catalytic domain o 98.9 1.6E-08 3.4E-13 110.5 12.2 132 411-585 1-141 (215)
209 cd03003 PDI_a_ERdj5_N PDIa fam 98.8 6.8E-10 1.5E-14 109.7 1.3 78 748-841 4-83 (101)
210 cd05618 STKc_aPKC_iota Catalyt 98.8 1.2E-08 2.7E-13 122.4 12.3 137 409-585 1-144 (329)
211 cd05588 STKc_aPKC Catalytic do 98.8 1.4E-08 3.1E-13 121.9 12.8 136 410-585 2-144 (329)
212 cd05612 STKc_PRKX_like Catalyt 98.8 9E-09 1.9E-13 121.2 10.9 136 409-586 7-150 (291)
213 cd06657 STKc_PAK4 Catalytic do 98.8 7.8E-09 1.7E-13 122.0 10.3 148 394-585 4-164 (292)
214 KOG0720|consensus 98.8 2.4E-09 5.3E-14 125.8 5.8 69 636-704 234-302 (490)
215 cd05625 STKc_LATS1 Catalytic d 98.8 1.3E-08 2.9E-13 124.7 12.7 136 409-584 7-148 (382)
216 cd07869 STKc_PFTAIRE1 Catalyti 98.8 8.8E-09 1.9E-13 121.9 10.7 135 409-585 11-151 (303)
217 cd05584 STKc_p70S6K Catalytic 98.8 1.5E-08 3.2E-13 121.4 12.5 138 409-585 2-148 (323)
218 cd05608 STKc_GRK1 Catalytic do 98.8 2E-08 4.3E-13 117.6 13.2 136 411-586 1-146 (280)
219 PTZ00062 glutaredoxin; Provisi 98.8 1.9E-08 4.2E-13 111.3 12.0 92 859-964 5-96 (204)
220 cd05586 STKc_Sck1_like Catalyt 98.8 2.4E-08 5.1E-13 119.9 13.5 136 411-585 1-144 (330)
221 cd05629 STKc_NDR_like_fungal C 98.8 2.1E-08 4.5E-13 122.8 13.2 135 409-585 7-149 (377)
222 PRK09605 bifunctional UGMP fam 98.8 1.1E-08 2.5E-13 130.9 11.3 137 406-584 336-474 (535)
223 cd07871 STKc_PCTAIRE3 Catalyti 98.8 1.6E-08 3.4E-13 118.9 11.6 135 409-585 11-151 (288)
224 cd06642 STKc_STK25-YSK1 Cataly 98.8 1.1E-08 2.4E-13 119.1 10.2 143 400-587 3-151 (277)
225 cd05609 STKc_MAST Catalytic do 98.8 1.9E-08 4.1E-13 119.2 12.0 134 409-584 7-148 (305)
226 cd05589 STKc_PKN Catalytic dom 98.8 1.7E-08 3.6E-13 120.9 11.7 139 409-585 5-149 (324)
227 cd05596 STKc_ROCK Catalytic do 98.8 2.1E-08 4.5E-13 122.7 12.5 137 409-586 49-191 (370)
228 cd02963 TRX_DnaJ TRX domain, D 98.8 1.3E-09 2.9E-14 109.8 1.7 80 748-840 7-89 (111)
229 cd05621 STKc_ROCK2 Catalytic d 98.8 2.1E-08 4.6E-13 122.5 12.6 137 409-586 49-191 (370)
230 KOG0663|consensus 98.8 1.3E-08 2.7E-13 116.0 9.6 138 409-586 82-226 (419)
231 PRK12274 serine/threonine prot 98.8 1.5E-08 3.3E-13 112.2 10.1 128 409-584 8-139 (218)
232 cd06635 STKc_TAO1 Catalytic do 98.8 4E-08 8.6E-13 117.2 14.3 152 391-584 15-172 (317)
233 KOG0658|consensus 98.8 3.9E-09 8.4E-14 122.2 5.3 136 407-588 28-177 (364)
234 PRK01356 hscB co-chaperone Hsc 98.8 5.8E-09 1.2E-13 112.0 6.2 66 637-702 2-73 (166)
235 cd05622 STKc_ROCK1 Catalytic d 98.8 2.5E-08 5.4E-13 122.0 12.6 137 409-586 49-191 (371)
236 cd02951 SoxW SoxW family; SoxW 98.8 1E-08 2.2E-13 105.5 7.8 89 872-962 12-119 (125)
237 PRK05014 hscB co-chaperone Hsc 98.8 5.9E-09 1.3E-13 112.7 6.1 64 637-700 1-72 (171)
238 cd06640 STKc_MST4 Catalytic do 98.8 2.7E-08 5.9E-13 115.9 12.1 143 400-587 3-151 (277)
239 KOG0575|consensus 98.8 2.3E-08 5.1E-13 122.1 11.8 139 409-587 24-168 (592)
240 cd05112 PTKc_Itk Catalytic dom 98.8 2.9E-08 6.3E-13 113.9 12.1 134 409-585 10-148 (256)
241 KOG0582|consensus 98.8 2.3E-08 5E-13 117.7 11.1 130 409-584 32-173 (516)
242 cd05582 STKc_RSK_N N-terminal 98.8 3E-08 6.5E-13 118.3 12.3 136 409-585 2-146 (318)
243 cd06649 PKc_MEK2 Catalytic dom 98.8 3.2E-08 6.9E-13 118.9 12.4 136 409-586 11-153 (331)
244 KOG0032|consensus 98.8 2.6E-08 5.7E-13 121.2 11.6 138 409-586 41-188 (382)
245 PTZ00426 cAMP-dependent protei 98.8 3E-08 6.4E-13 119.9 12.0 137 409-585 36-179 (340)
246 cd06917 STKc_NAK1_like Catalyt 98.8 3.2E-08 7E-13 115.0 11.9 137 409-586 7-150 (277)
247 cd07872 STKc_PCTAIRE2 Catalyti 98.8 2.2E-08 4.7E-13 118.9 10.7 135 409-585 12-152 (309)
248 cd05079 PTKc_Jak1_rpt2 Catalyt 98.8 3.7E-08 7.9E-13 115.3 12.4 138 409-586 10-158 (284)
249 cd05064 PTKc_EphR_A10 Catalyti 98.8 2.9E-08 6.4E-13 115.1 11.5 135 409-584 11-154 (266)
250 cd05122 PKc_STE Catalytic doma 98.8 3.5E-08 7.5E-13 111.9 11.8 135 409-587 6-148 (253)
251 cd05104 PTKc_Kit Catalytic dom 98.8 2.6E-08 5.6E-13 122.0 11.3 138 408-586 40-263 (375)
252 cd05632 STKc_GRK5 Catalytic do 98.8 4.1E-08 8.9E-13 115.2 12.4 138 409-585 6-150 (285)
253 cd06641 STKc_MST3 Catalytic do 98.8 4.5E-08 9.8E-13 114.1 12.7 142 399-585 2-149 (277)
254 cd05068 PTKc_Frk_like Catalyti 98.8 3E-08 6.5E-13 114.4 10.9 135 409-586 12-152 (261)
255 KOG1166|consensus 98.8 6.7E-09 1.4E-13 135.6 6.1 139 409-590 704-854 (974)
256 cd05623 STKc_MRCK_alpha Cataly 98.8 3.1E-08 6.7E-13 119.1 11.4 136 409-585 7-150 (332)
257 cd05114 PTKc_Tec_Rlk Catalytic 98.8 4.6E-08 1E-12 112.5 12.4 135 409-586 10-149 (256)
258 cd02952 TRP14_like Human TRX-r 98.8 1.3E-08 2.9E-13 103.2 6.8 81 860-943 9-104 (119)
259 cd05041 PTKc_Fes_like Catalyti 98.7 5E-08 1.1E-12 111.6 12.4 136 409-586 1-142 (251)
260 COG5407 SEC63 Preprotein trans 98.7 1.2E-08 2.6E-13 118.5 7.2 92 615-706 71-173 (610)
261 cd00192 PTKc Catalytic domain 98.7 4.6E-08 1E-12 111.9 12.1 138 409-587 1-155 (262)
262 cd06629 STKc_MAPKKK_Bck1_like 98.7 5.5E-08 1.2E-12 112.8 12.9 150 403-585 1-156 (272)
263 cd05605 STKc_GRK4_like Catalyt 98.7 4.9E-08 1.1E-12 114.6 12.5 138 409-585 6-150 (285)
264 cd05619 STKc_nPKC_theta Cataly 98.7 4.9E-08 1.1E-12 116.6 12.5 137 410-585 2-144 (316)
265 cd05607 STKc_GRK7 Catalytic do 98.7 5.6E-08 1.2E-12 113.6 12.7 137 411-586 1-144 (277)
266 cd07862 STKc_CDK6 Catalytic do 98.7 3.2E-08 6.9E-13 116.0 10.5 140 409-585 7-158 (290)
267 cd06631 STKc_YSK4 Catalytic do 98.7 7.3E-08 1.6E-12 111.3 13.4 142 409-587 6-152 (265)
268 PRK13184 pknD serine/threonine 98.7 4.3E-08 9.3E-13 129.0 12.6 140 409-587 8-163 (932)
269 KOG1164|consensus 98.7 3E-08 6.4E-13 119.0 10.3 139 408-587 23-177 (322)
270 PRK00294 hscB co-chaperone Hsc 98.7 1.3E-08 2.9E-13 109.7 6.4 67 635-701 2-76 (173)
271 cd05103 PTKc_VEGFR2 Catalytic 98.7 4.2E-08 9.2E-13 118.5 11.6 138 409-586 13-228 (343)
272 cd05077 PTK_Jak1_rpt1 Pseudoki 98.7 9E-08 1.9E-12 110.9 13.8 135 409-585 1-160 (262)
273 KOG0600|consensus 98.7 4E-08 8.8E-13 117.4 10.7 146 394-584 110-265 (560)
274 PRK10345 hypothetical protein; 98.7 2.6E-08 5.7E-13 111.7 8.8 135 407-584 6-156 (210)
275 PF00069 Pkinase: Protein kina 98.7 5E-08 1.1E-12 111.9 11.3 136 409-585 5-146 (260)
276 cd05033 PTKc_EphR Catalytic do 98.7 6.3E-08 1.4E-12 112.0 12.1 138 409-587 10-156 (266)
277 cd05063 PTKc_EphR_A2 Catalytic 98.7 5.5E-08 1.2E-12 112.5 11.6 138 408-586 10-156 (268)
278 KOG0198|consensus 98.7 4.4E-08 9.6E-13 115.2 10.8 136 409-588 23-169 (313)
279 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.7 5.3E-08 1.1E-12 113.7 11.5 71 514-584 89-171 (274)
280 cd05610 STKc_MASTL Catalytic d 98.7 4E-08 8.7E-13 129.0 11.7 137 409-585 10-152 (669)
281 cd06646 STKc_MAP4K5 Catalytic 98.7 6.2E-08 1.3E-12 112.0 11.9 136 409-587 15-156 (267)
282 cd05034 PTKc_Src_like Catalyti 98.7 6.2E-08 1.3E-12 111.5 11.7 132 409-585 12-151 (261)
283 cd06625 STKc_MEKK3_like Cataly 98.7 7.5E-08 1.6E-12 110.9 12.4 141 409-587 8-154 (263)
284 KOG0578|consensus 98.7 2.5E-08 5.3E-13 121.0 8.4 139 397-583 269-415 (550)
285 cd06650 PKc_MEK1 Catalytic dom 98.7 9E-08 2E-12 115.2 13.1 136 409-586 11-153 (333)
286 cd05082 PTKc_Csk Catalytic dom 98.7 7.2E-08 1.6E-12 110.8 11.8 134 409-586 12-151 (256)
287 PRK03578 hscB co-chaperone Hsc 98.7 1.7E-08 3.6E-13 109.4 6.0 66 635-700 4-77 (176)
288 cd05069 PTKc_Yes Catalytic dom 98.7 9.2E-08 2E-12 110.3 12.6 133 409-585 12-150 (260)
289 cd05633 STKc_GRK3 Catalytic do 98.7 9.8E-08 2.1E-12 111.8 13.0 138 410-586 1-146 (279)
290 cd05570 STKc_PKC Catalytic dom 98.7 8.2E-08 1.8E-12 114.7 12.5 135 410-584 2-143 (318)
291 cd07848 STKc_CDKL5 Catalytic d 98.7 4.1E-08 8.8E-13 114.9 9.7 137 409-586 7-149 (287)
292 cd02993 PDI_a_APS_reductase PD 98.7 6.4E-09 1.4E-13 104.5 2.5 84 749-840 5-88 (109)
293 cd05113 PTKc_Btk_Bmx Catalytic 98.7 8.5E-08 1.8E-12 110.6 12.1 134 409-585 10-148 (256)
294 cd05067 PTKc_Lck_Blk Catalytic 98.7 7.2E-08 1.6E-12 111.1 11.5 134 409-586 12-151 (260)
295 cd07876 STKc_JNK2 Catalytic do 98.7 9.8E-08 2.1E-12 116.0 13.2 134 409-585 27-171 (359)
296 KOG0660|consensus 98.7 1.7E-08 3.8E-13 116.7 6.1 139 408-585 27-173 (359)
297 cd07859 STKc_TDY_MAPK_plant Ca 98.7 6.3E-08 1.4E-12 116.2 11.3 136 409-585 6-151 (338)
298 KOG0587|consensus 98.7 3.6E-08 7.9E-13 124.0 9.4 148 397-588 15-174 (953)
299 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.7 1.1E-07 2.4E-12 111.1 13.0 137 409-586 10-157 (284)
300 smart00219 TyrKc Tyrosine kina 98.7 8.2E-08 1.8E-12 109.8 11.7 138 409-587 5-153 (258)
301 cd05072 PTKc_Lyn Catalytic dom 98.7 1E-07 2.2E-12 109.9 12.5 135 409-586 12-152 (261)
302 cd05040 PTKc_Ack_like Catalyti 98.7 9.1E-08 2E-12 109.9 12.0 137 409-587 1-147 (257)
303 cd06644 STKc_STK10_LOK Catalyt 98.7 1E-07 2.2E-12 112.1 12.7 144 399-586 10-159 (292)
304 cd03004 PDI_a_ERdj5_C PDIa fam 98.7 4.3E-09 9.4E-14 104.5 0.8 77 749-840 5-83 (104)
305 cd05070 PTKc_Fyn_Yrk Catalytic 98.7 1E-07 2.3E-12 109.8 12.4 133 409-585 12-150 (260)
306 cd06611 STKc_SLK_like Catalyti 98.7 1E-07 2.2E-12 111.1 12.4 136 409-586 11-152 (280)
307 cd06637 STKc_TNIK Catalytic do 98.7 5.1E-08 1.1E-12 112.9 9.8 144 399-585 4-159 (272)
308 cd05049 PTKc_Trk Catalytic dom 98.7 7.9E-08 1.7E-12 111.9 11.4 136 409-585 11-170 (280)
309 KOG1187|consensus 98.7 7.3E-08 1.6E-12 116.9 11.4 138 405-584 76-224 (361)
310 cd05108 PTKc_EGFR Catalytic do 98.7 1E-07 2.2E-12 113.7 12.5 137 409-587 13-159 (316)
311 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.7 1E-07 2.2E-12 111.4 12.3 135 409-585 10-155 (283)
312 cd07880 STKc_p38gamma_MAPK12 C 98.7 4.8E-08 1E-12 118.0 9.8 136 409-586 21-167 (343)
313 KOG0659|consensus 98.7 7.6E-08 1.7E-12 107.0 10.3 133 409-584 8-148 (318)
314 cd03007 PDI_a_ERp29_N PDIa fam 98.7 3.1E-09 6.7E-14 106.9 -0.5 76 748-840 4-90 (116)
315 cd05120 APH_ChoK_like Aminogly 98.7 1.1E-07 2.3E-12 99.0 11.1 125 409-584 4-136 (155)
316 KOG0610|consensus 98.7 6.9E-08 1.5E-12 113.1 10.4 138 409-587 83-229 (459)
317 cd05037 PTK_Jak_rpt1 Pseudokin 98.7 9.9E-08 2.1E-12 109.5 11.7 134 409-586 1-157 (259)
318 KOG0714|consensus 98.7 1.8E-08 3.8E-13 118.8 5.5 68 636-703 2-71 (306)
319 cd08229 STKc_Nek7 Catalytic do 98.7 3E-07 6.5E-12 106.2 15.6 137 409-585 8-154 (267)
320 cd05087 PTKc_Aatyk1_Aatyk3 Cat 98.7 1.4E-07 3.1E-12 109.3 13.0 134 410-584 2-147 (269)
321 cd05059 PTKc_Tec_like Catalyti 98.7 9.9E-08 2.1E-12 109.8 11.6 132 409-585 10-148 (256)
322 cd05611 STKc_Rim15_like Cataly 98.7 1.5E-07 3.2E-12 108.5 13.0 138 409-585 2-145 (260)
323 cd07874 STKc_JNK3 Catalytic do 98.7 6.6E-08 1.4E-12 117.2 10.6 134 409-585 23-167 (355)
324 cd07873 STKc_PCTAIRE1 Catalyti 98.7 8.1E-08 1.8E-12 113.5 11.1 136 409-586 12-153 (301)
325 cd05097 PTKc_DDR_like Catalyti 98.7 8.3E-08 1.8E-12 113.1 11.1 137 409-586 11-178 (295)
326 PTZ00284 protein kinase; Provi 98.7 8.3E-08 1.8E-12 121.0 11.8 136 409-584 135-295 (467)
327 cd05057 PTKc_EGFR_like Catalyt 98.7 1.3E-07 2.7E-12 110.4 12.5 136 409-586 13-158 (279)
328 cd08223 STKc_Nek4 Catalytic do 98.7 1.2E-07 2.7E-12 108.7 12.1 138 409-585 6-150 (257)
329 cd07863 STKc_CDK4 Catalytic do 98.7 6.7E-08 1.4E-12 113.1 10.1 140 409-585 6-156 (288)
330 cd05581 STKc_PDK1 Catalytic do 98.7 6.2E-08 1.3E-12 112.4 9.8 136 409-585 7-150 (280)
331 KOG0608|consensus 98.7 2.8E-08 6E-13 120.1 6.7 138 401-583 629-775 (1034)
332 KOG0585|consensus 98.7 8.8E-08 1.9E-12 113.5 10.7 147 409-584 103-257 (576)
333 cd07868 STKc_CDK8 Catalytic do 98.7 1.1E-07 2.4E-12 113.1 11.9 135 407-585 5-160 (317)
334 cd08529 STKc_FA2-like Catalyti 98.6 1.5E-07 3.3E-12 107.8 12.4 137 409-585 6-149 (256)
335 cd05073 PTKc_Hck Catalytic dom 98.6 1.3E-07 2.9E-12 109.1 12.0 133 409-585 12-150 (260)
336 cd06612 STKc_MST1_2 Catalytic 98.6 1.8E-07 3.8E-12 107.2 12.9 134 409-586 9-148 (256)
337 cd05105 PTKc_PDGFR_alpha Catal 98.6 1.4E-07 3.1E-12 116.5 12.9 46 540-585 235-285 (400)
338 cd05071 PTKc_Src Catalytic dom 98.6 1.4E-07 3.1E-12 109.1 12.1 134 409-586 12-151 (262)
339 cd07875 STKc_JNK1 Catalytic do 98.6 9.8E-08 2.1E-12 116.2 11.2 134 409-585 30-174 (364)
340 KOG0611|consensus 98.6 5.9E-08 1.3E-12 112.1 8.4 135 409-584 59-200 (668)
341 cd05065 PTKc_EphR_B Catalytic 98.6 1.5E-07 3.2E-12 109.2 12.1 135 409-584 10-153 (269)
342 cd06605 PKc_MAPKK Catalytic do 98.6 9.3E-08 2E-12 110.2 10.3 138 409-587 7-151 (265)
343 cd05109 PTKc_HER2 Catalytic do 98.6 2E-07 4.3E-12 108.8 13.2 135 409-586 13-158 (279)
344 cd07847 STKc_CDKL1_4 Catalytic 98.6 1.2E-07 2.7E-12 110.4 11.4 136 409-585 7-148 (286)
345 cd02999 PDI_a_ERp44_like PDIa 98.6 1E-08 2.2E-13 101.4 1.9 63 763-840 16-82 (100)
346 PTZ00036 glycogen synthase kin 98.6 1.2E-07 2.6E-12 118.6 12.0 148 392-587 57-221 (440)
347 cd05606 STKc_beta_ARK Catalyti 98.6 1.7E-07 3.8E-12 109.5 12.4 138 410-586 1-146 (278)
348 cd05066 PTKc_EphR_A Catalytic 98.6 1.5E-07 3.3E-12 109.0 11.8 137 409-586 10-155 (267)
349 PTZ00100 DnaJ chaperone protei 98.6 2.1E-08 4.6E-13 99.7 3.9 55 633-690 61-115 (116)
350 KOG0592|consensus 98.6 1.3E-07 2.8E-12 114.0 11.0 133 409-585 79-222 (604)
351 cd06656 STKc_PAK3 Catalytic do 98.6 1.4E-07 3.1E-12 111.4 11.6 133 409-585 25-163 (297)
352 cd06627 STKc_Cdc7_like Catalyt 98.6 1.6E-07 3.4E-12 107.2 11.4 138 409-587 6-149 (254)
353 cd05036 PTKc_ALK_LTK Catalytic 98.6 1.6E-07 3.5E-12 109.5 11.7 137 409-586 12-168 (277)
354 cd05580 STKc_PKA Catalytic dom 98.6 1.8E-07 3.9E-12 109.9 12.1 138 409-586 7-150 (290)
355 cd06639 STKc_myosinIIIB Cataly 98.6 2E-07 4.4E-12 109.3 12.6 138 409-587 28-178 (291)
356 PHA03209 serine/threonine kina 98.6 8.3E-08 1.8E-12 116.7 9.5 128 409-585 72-205 (357)
357 cd02996 PDI_a_ERp44 PDIa famil 98.6 1.1E-08 2.5E-13 102.3 1.6 77 749-841 5-89 (108)
358 cd02994 PDI_a_TMX PDIa family, 98.6 1.4E-08 3E-13 100.3 2.1 75 748-840 4-81 (101)
359 cd05613 STKc_MSK1_N N-terminal 98.6 1.7E-07 3.8E-12 109.9 11.7 138 409-586 6-154 (290)
360 PTZ00267 NIMA-related protein 98.6 1.4E-07 3E-12 119.4 11.6 136 409-586 73-218 (478)
361 KOG4721|consensus 98.6 9E-08 2E-12 114.7 9.1 138 393-587 117-262 (904)
362 KOG0616|consensus 98.6 2.1E-07 4.6E-12 104.9 11.5 135 409-586 50-193 (355)
363 cd06638 STKc_myosinIIIA Cataly 98.6 2.2E-07 4.8E-12 108.6 12.4 138 409-587 24-174 (286)
364 cd08224 STKc_Nek6_Nek7 Catalyt 98.6 2.1E-07 4.5E-12 107.3 12.0 138 409-585 8-154 (267)
365 cd05090 PTKc_Ror1 Catalytic do 98.6 1.8E-07 3.9E-12 109.3 11.6 138 409-587 11-174 (283)
366 KOG1095|consensus 98.6 1.8E-07 4E-12 122.4 12.5 139 409-588 698-853 (1025)
367 cd06632 STKc_MEKK1_plant Catal 98.6 1.8E-07 4E-12 107.1 11.2 141 408-586 5-151 (258)
368 cd05630 STKc_GRK6 Catalytic do 98.6 2E-07 4.4E-12 109.4 11.8 138 409-585 6-150 (285)
369 smart00221 STYKc Protein kinas 98.6 2.4E-07 5.1E-12 103.4 11.8 137 409-586 5-147 (225)
370 PTZ00283 serine/threonine prot 98.6 1.6E-07 3.5E-12 119.1 11.7 139 409-586 38-192 (496)
371 cd06636 STKc_MAP4K4_6 Catalyti 98.6 1.5E-07 3.2E-12 110.0 10.5 137 409-587 22-171 (282)
372 cd05054 PTKc_VEGFR Catalytic d 98.6 1.8E-07 3.9E-12 112.9 11.5 49 539-587 170-223 (337)
373 cd06628 STKc_MAPKKK_Byr2_like 98.6 2.7E-07 5.9E-12 106.6 12.5 145 409-587 6-156 (267)
374 cd06643 STKc_SLK Catalytic dom 98.6 3.2E-07 6.9E-12 107.2 13.2 136 409-586 11-152 (282)
375 cd05061 PTKc_InsR Catalytic do 98.6 2.8E-07 6.1E-12 108.2 12.7 136 409-585 12-167 (288)
376 cd05075 PTKc_Axl Catalytic dom 98.6 2.5E-07 5.5E-12 107.1 12.2 139 409-586 5-161 (272)
377 PHA03211 serine/threonine kina 98.6 1.3E-07 2.9E-12 118.5 10.5 128 409-585 175-308 (461)
378 cd06619 PKc_MKK5 Catalytic dom 98.6 2.1E-07 4.5E-12 108.8 11.5 132 409-586 7-144 (279)
379 KOG0201|consensus 98.6 1.9E-08 4E-13 118.6 2.6 146 398-590 10-164 (467)
380 cd05083 PTKc_Chk Catalytic dom 98.6 2.5E-07 5.4E-12 106.3 11.9 131 409-585 12-148 (254)
381 cd07853 STKc_NLK Catalytic dom 98.6 1.4E-07 3E-12 115.3 10.4 136 409-585 6-151 (372)
382 cd05048 PTKc_Ror Catalytic Dom 98.6 2.4E-07 5.3E-12 108.0 12.0 136 409-585 11-172 (283)
383 KOG0597|consensus 98.6 1.7E-07 3.8E-12 112.6 10.6 226 409-699 8-246 (808)
384 cd06608 STKc_myosinIII_like Ca 98.6 1.7E-07 3.6E-12 108.4 10.4 137 409-586 12-162 (275)
385 cd07832 STKc_CCRK Catalytic do 98.6 1.7E-07 3.7E-12 109.3 10.6 137 409-586 6-148 (286)
386 cd07845 STKc_CDK10 Catalytic d 98.6 1.2E-07 2.6E-12 112.4 9.5 138 409-586 13-157 (309)
387 cd06654 STKc_PAK1 Catalytic do 98.6 2.1E-07 4.4E-12 110.0 11.3 134 409-586 26-165 (296)
388 cd05101 PTKc_FGFR2 Catalytic d 98.6 2.4E-07 5.2E-12 109.6 11.9 139 409-587 21-187 (304)
389 cd06645 STKc_MAP4K3 Catalytic 98.6 2.4E-07 5.2E-12 107.1 11.5 136 409-587 15-156 (267)
390 cd06623 PKc_MAPKK_plant_like C 98.6 2.7E-07 5.9E-12 106.0 11.9 137 409-587 7-150 (264)
391 cd05062 PTKc_IGF-1R Catalytic 98.6 3.1E-07 6.7E-12 107.0 12.3 136 409-585 12-167 (277)
392 cd06624 STKc_ASK Catalytic dom 98.6 2.9E-07 6.2E-12 106.6 12.0 136 409-586 14-158 (268)
393 cd07844 STKc_PCTAIRE_like Cata 98.6 1.7E-07 3.8E-12 109.8 10.3 135 409-585 11-151 (291)
394 KOG0588|consensus 98.6 1.6E-07 3.4E-12 115.3 9.9 130 409-584 18-159 (786)
395 cd05583 STKc_MSK_N N-terminal 98.6 2.3E-07 5E-12 108.7 11.3 138 409-585 6-153 (288)
396 cd06606 STKc_MAPKKK Catalytic 98.6 3.1E-07 6.8E-12 104.6 12.0 139 409-587 6-151 (260)
397 cd05577 STKc_GRK Catalytic dom 98.6 3.2E-07 6.9E-12 107.0 12.3 137 411-586 1-144 (277)
398 cd06630 STKc_MEKK1 Catalytic d 98.6 2.6E-07 5.7E-12 106.6 11.5 142 409-587 6-154 (268)
399 cd03002 PDI_a_MPD1_like PDI fa 98.6 1.6E-08 3.5E-13 101.1 1.2 78 749-841 4-85 (109)
400 PHA03212 serine/threonine kina 98.6 1.8E-07 4E-12 115.2 10.8 127 409-585 98-230 (391)
401 cd07836 STKc_Pho85 Catalytic d 98.6 2.5E-07 5.4E-12 107.9 11.4 134 409-586 6-149 (284)
402 cd05088 PTKc_Tie2 Catalytic do 98.6 3.7E-07 8E-12 108.2 12.9 135 409-585 13-172 (303)
403 PTZ00443 Thioredoxin domain-co 98.6 1.3E-08 2.7E-13 114.6 0.4 82 747-841 32-117 (224)
404 cd05098 PTKc_FGFR1 Catalytic d 98.6 3.3E-07 7E-12 108.8 12.3 138 409-586 24-189 (307)
405 cd07861 STKc_CDK1_euk Catalyti 98.6 2E-07 4.3E-12 108.8 10.4 136 409-585 6-149 (285)
406 cd05038 PTKc_Jak_rpt2 Catalyti 98.6 2.6E-07 5.7E-12 107.5 11.3 139 409-587 10-159 (284)
407 cd05039 PTKc_Csk_like Catalyti 98.6 4.1E-07 9E-12 104.5 12.8 135 409-587 12-152 (256)
408 cd06614 STKc_PAK Catalytic dom 98.6 3.6E-07 7.8E-12 107.0 12.5 143 399-586 17-165 (286)
409 cd05116 PTKc_Syk Catalytic dom 98.6 4.1E-07 8.9E-12 104.8 12.7 135 410-586 2-144 (257)
410 cd06658 STKc_PAK5 Catalytic do 98.6 1.8E-07 3.9E-12 110.3 9.9 141 400-586 21-167 (292)
411 cd05056 PTKc_FAK Catalytic dom 98.6 3.3E-07 7.2E-12 106.2 11.9 134 409-584 12-154 (270)
412 cd07841 STKc_CDK7 Catalytic do 98.6 1.9E-07 4.1E-12 109.9 10.0 139 409-585 6-150 (298)
413 cd05106 PTKc_CSF-1R Catalytic 98.6 2.4E-07 5.2E-12 113.5 11.1 48 539-586 209-261 (374)
414 cd02992 PDI_a_QSOX PDIa family 98.6 2.1E-08 4.6E-13 101.6 1.6 79 748-841 4-89 (114)
415 cd06648 STKc_PAK_II Catalytic 98.6 5.5E-07 1.2E-11 105.7 13.7 133 409-585 25-163 (285)
416 PHA02125 thioredoxin-like prot 98.6 1.2E-07 2.7E-12 88.6 6.6 69 877-956 2-71 (75)
417 cd07833 STKc_CDKL Catalytic do 98.5 1.6E-07 3.5E-12 109.6 9.1 138 409-587 7-150 (288)
418 cd06633 STKc_TAO3 Catalytic do 98.5 4.9E-07 1.1E-11 107.8 13.3 149 395-585 15-169 (313)
419 cd08228 STKc_Nek6 Catalytic do 98.5 3.4E-07 7.4E-12 105.7 11.7 138 409-585 8-154 (267)
420 cd07870 STKc_PFTAIRE2 Catalyti 98.5 2.9E-07 6.3E-12 108.0 11.3 135 409-585 11-151 (291)
421 cd05055 PTKc_PDGFR Catalytic d 98.5 3.5E-07 7.6E-12 108.4 11.9 140 408-587 40-191 (302)
422 cd07840 STKc_CDK9_like Catalyt 98.5 2.3E-07 4.9E-12 108.1 10.1 139 409-587 5-150 (287)
423 cd08219 STKc_Nek3 Catalytic do 98.5 5E-07 1.1E-11 103.7 12.7 136 409-585 6-148 (255)
424 cd05042 PTKc_Aatyk Catalytic d 98.5 4.4E-07 9.5E-12 105.2 12.3 135 410-585 2-148 (269)
425 PHA02988 hypothetical protein; 98.5 4.4E-07 9.5E-12 106.7 12.4 142 404-585 21-171 (283)
426 cd07879 STKc_p38delta_MAPK13 C 98.5 2.6E-07 5.6E-12 111.6 10.7 135 408-585 20-165 (342)
427 cd05579 STKc_MAST_like Catalyt 98.5 3.4E-07 7.4E-12 105.0 11.2 133 411-585 1-141 (265)
428 KOG1989|consensus 98.5 2E-07 4.3E-12 118.7 9.8 136 408-586 42-195 (738)
429 cd06613 STKc_MAP4K3_like Catal 98.5 5.8E-07 1.3E-11 103.3 12.9 137 409-587 9-151 (262)
430 cd05095 PTKc_DDR2 Catalytic do 98.5 3.3E-07 7.1E-12 108.1 11.1 137 409-586 11-179 (296)
431 KOG0910|consensus 98.5 2.4E-08 5.2E-13 103.1 1.3 78 752-842 50-127 (150)
432 cd05047 PTKc_Tie Catalytic dom 98.5 6.3E-07 1.4E-11 104.1 13.2 135 409-584 1-159 (270)
433 cd06607 STKc_TAO Catalytic dom 98.5 4.7E-07 1E-11 107.4 12.4 146 398-585 12-163 (307)
434 cd07867 STKc_CDC2L6 Catalytic 98.5 4.1E-07 8.9E-12 108.1 11.8 135 407-585 5-160 (317)
435 PF07714 Pkinase_Tyr: Protein 98.5 3.1E-07 6.7E-12 106.3 10.5 137 409-586 5-152 (259)
436 PRK09430 djlA Dna-J like membr 98.5 5.6E-08 1.2E-12 112.5 4.3 57 635-691 198-262 (267)
437 cd07864 STKc_CDK12 Catalytic d 98.5 2.3E-07 4.9E-12 109.4 9.5 138 409-586 13-165 (302)
438 cd06610 STKc_OSR1_SPAK Catalyt 98.5 6.5E-07 1.4E-11 103.1 13.0 138 409-587 7-152 (267)
439 cd05099 PTKc_FGFR4 Catalytic d 98.5 1.2E-06 2.6E-11 104.4 15.6 138 409-586 18-183 (314)
440 cd06615 PKc_MEK Catalytic doma 98.5 4.6E-07 1E-11 107.6 12.1 136 409-586 7-149 (308)
441 cd06626 STKc_MEKK4 Catalytic d 98.5 4.5E-07 9.8E-12 104.3 11.6 138 409-587 6-149 (264)
442 cd06609 STKc_MST3_like Catalyt 98.5 3.6E-07 7.9E-12 106.1 10.9 136 409-587 7-148 (274)
443 cd05089 PTKc_Tie1 Catalytic do 98.5 4.9E-07 1.1E-11 106.7 12.2 137 409-585 8-167 (297)
444 PF00085 Thioredoxin: Thioredo 98.5 2.8E-08 6.2E-13 97.7 1.4 77 749-841 3-82 (103)
445 cd06617 PKc_MKK3_6 Catalytic d 98.5 4.3E-07 9.3E-12 105.9 11.5 137 409-586 7-153 (283)
446 PHA02624 large T antigen; Prov 98.5 5.9E-08 1.3E-12 120.3 4.4 64 633-699 7-72 (647)
447 cd05050 PTKc_Musk Catalytic do 98.5 5E-07 1.1E-11 105.9 12.0 136 409-585 11-178 (288)
448 cd06620 PKc_MAPKK_Byr1_like Ca 98.5 4.2E-07 9E-12 106.4 11.3 136 409-586 11-153 (284)
449 cd05058 PTKc_Met_Ron Catalytic 98.5 4.6E-07 1E-11 104.3 11.5 136 410-585 2-146 (262)
450 KOG0193|consensus 98.5 2.1E-07 4.5E-12 113.5 8.7 131 409-584 398-535 (678)
451 cd02995 PDI_a_PDI_a'_C PDIa fa 98.5 3.6E-08 7.9E-13 97.3 1.9 78 749-841 4-84 (104)
452 PRK01723 3-deoxy-D-manno-octul 98.5 5.6E-07 1.2E-11 103.3 11.9 141 409-584 37-189 (239)
453 PF13848 Thioredoxin_6: Thiore 98.5 3.4E-06 7.4E-11 92.3 17.6 169 890-1071 7-183 (184)
454 TIGR00412 redox_disulf_2 small 98.5 1.8E-07 4E-12 87.7 6.4 72 878-958 3-75 (76)
455 cd05060 PTKc_Syk_like Catalyti 98.5 6.2E-07 1.4E-11 103.2 12.3 134 410-586 2-144 (257)
456 cd07837 STKc_CdkB_plant Cataly 98.5 3.9E-07 8.4E-12 107.0 10.8 139 409-586 7-160 (295)
457 cd07839 STKc_CDK5 Catalytic do 98.5 2.2E-07 4.8E-12 108.5 8.5 136 409-585 6-147 (284)
458 KOG0612|consensus 98.5 2.1E-07 4.6E-12 119.8 8.7 136 409-587 81-225 (1317)
459 cd05051 PTKc_DDR Catalytic dom 98.5 6.8E-07 1.5E-11 105.0 12.6 137 409-586 11-179 (296)
460 cd05035 PTKc_Axl_like Catalyti 98.5 6.4E-07 1.4E-11 103.6 12.2 138 409-585 5-161 (273)
461 cd06634 STKc_TAO2 Catalytic do 98.5 6.9E-07 1.5E-11 106.2 12.7 148 396-585 10-163 (308)
462 cd06655 STKc_PAK2 Catalytic do 98.5 5.3E-07 1.1E-11 106.6 11.6 135 409-587 25-165 (296)
463 cd06621 PKc_MAPKK_Pek1_like Ca 98.5 6E-07 1.3E-11 105.4 12.0 139 409-587 7-155 (287)
464 cd05052 PTKc_Abl Catalytic dom 98.5 6.1E-07 1.3E-11 103.7 11.8 134 409-585 12-152 (263)
465 cd05574 STKc_phototropin_like 98.5 5.8E-07 1.3E-11 106.9 12.0 136 409-585 7-151 (316)
466 cd05110 PTKc_HER4 Catalytic do 98.5 6.3E-07 1.4E-11 106.2 12.1 137 409-587 13-159 (303)
467 KOG0580|consensus 98.5 1.2E-07 2.6E-12 104.2 5.3 162 409-614 28-204 (281)
468 PTZ00266 NIMA-related protein 98.5 5.2E-07 1.1E-11 119.5 12.3 139 409-586 19-191 (1021)
469 cd05107 PTKc_PDGFR_beta Cataly 98.5 7.1E-07 1.5E-11 110.4 12.9 33 553-585 252-287 (401)
470 cd05148 PTKc_Srm_Brk Catalytic 98.5 4.9E-07 1.1E-11 104.0 10.7 136 409-586 12-153 (261)
471 cd07843 STKc_CDC2L1 Catalytic 98.5 4.4E-07 9.5E-12 106.6 10.4 138 409-586 11-155 (293)
472 cd06653 STKc_MEKK3_like_1 Cata 98.5 6.8E-07 1.5E-11 103.4 11.8 142 409-587 8-156 (264)
473 KOG0197|consensus 98.5 3.7E-07 8E-12 110.8 9.8 134 409-585 212-351 (468)
474 cd06659 STKc_PAK6 Catalytic do 98.5 5E-07 1.1E-11 106.8 10.9 141 399-585 19-165 (297)
475 cd06652 STKc_MEKK2 Catalytic d 98.5 7.1E-07 1.5E-11 103.2 11.9 141 409-586 8-155 (265)
476 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.5 2.9E-07 6.3E-12 106.2 8.5 82 503-585 62-156 (258)
477 cd05572 STKc_cGK_PKG Catalytic 98.5 7.8E-07 1.7E-11 102.6 12.0 137 411-587 1-143 (262)
478 cd08221 STKc_Nek9 Catalytic do 98.5 8.4E-07 1.8E-11 101.8 12.2 137 409-585 6-149 (256)
479 PRK00293 dipZ thiol:disulfide 98.5 2.1E-07 4.6E-12 119.2 7.8 99 860-961 460-569 (571)
480 cd08215 STKc_Nek Catalytic dom 98.5 7.8E-07 1.7E-11 101.5 11.7 137 409-585 6-151 (258)
481 TIGR00424 APS_reduc 5'-adenyly 98.5 5.3E-08 1.1E-12 119.8 2.2 83 746-841 352-439 (463)
482 cd07850 STKc_JNK Catalytic dom 98.5 4.7E-07 1E-11 109.8 10.4 135 409-586 22-167 (353)
483 cd05578 STKc_Yank1 Catalytic d 98.5 4.5E-07 9.8E-12 104.3 9.7 135 409-585 6-148 (258)
484 PLN03225 Serine/threonine-prot 98.5 4.8E-07 1E-11 116.3 10.9 73 514-586 208-305 (566)
485 cd06651 STKc_MEKK3 Catalytic d 98.5 9.1E-07 2E-11 102.4 12.2 142 409-587 8-156 (266)
486 PHA02278 thioredoxin-like prot 98.5 5.7E-08 1.2E-12 96.5 1.8 72 754-841 6-83 (103)
487 cd06622 PKc_MAPKK_PBS2_like Ca 98.5 5E-07 1.1E-11 105.7 9.9 137 409-586 7-152 (286)
488 cd05123 STKc_AGC Catalytic dom 98.5 7.2E-07 1.6E-11 101.8 10.9 134 411-586 1-142 (250)
489 PLN03224 probable serine/threo 98.4 5.9E-07 1.3E-11 113.1 11.0 72 514-585 258-357 (507)
490 KOG0913|consensus 98.4 6.1E-08 1.3E-12 105.8 1.8 101 854-961 25-125 (248)
491 KOG2270|consensus 98.4 7.7E-07 1.7E-11 103.5 10.8 157 401-583 143-310 (520)
492 cd07877 STKc_p38alpha_MAPK14 C 98.4 6.1E-07 1.3E-11 108.6 10.6 135 409-585 23-168 (345)
493 cd08220 STKc_Nek8 Catalytic do 98.4 8.1E-07 1.8E-11 101.7 11.1 138 409-586 6-151 (256)
494 cd07865 STKc_CDK9 Catalytic do 98.4 6.1E-07 1.3E-11 106.0 10.3 139 409-587 18-169 (310)
495 cd07835 STKc_CDK1_like Catalyt 98.4 5.5E-07 1.2E-11 105.1 9.8 137 409-586 5-148 (283)
496 cd07860 STKc_CDK2_3 Catalytic 98.4 4.3E-07 9.2E-12 106.1 8.9 136 409-585 6-148 (284)
497 cd02957 Phd_like Phosducin (Ph 98.4 5.4E-08 1.2E-12 98.5 1.1 77 750-841 9-87 (113)
498 KOG0598|consensus 98.4 5.5E-07 1.2E-11 104.9 9.4 134 409-584 31-172 (357)
499 cd02954 DIM1 Dim1 family; Dim1 98.4 9.2E-08 2E-12 96.1 2.6 73 755-842 5-80 (114)
500 cd03005 PDI_a_ERp46 PDIa famil 98.4 7E-08 1.5E-12 95.1 1.8 76 749-841 4-84 (102)
No 1
>KOG1235|consensus
Probab=100.00 E-value=1.4e-65 Score=625.50 Aligned_cols=293 Identities=40% Similarity=0.644 Sum_probs=271.3
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCc
Q psy12972 274 EDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCT 353 (1578)
Q Consensus 274 ~~~~~~~~~~~~~h~r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~ 353 (1578)
...+........+|.+.|++|+++|+.|||+|||+||++|||+|++|+||+++|+.|||+|||.||+++
T Consensus 77 ~~~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~----------- 145 (538)
T KOG1235|consen 77 ASSESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEA----------- 145 (538)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHH-----------
Confidence 345666678888999999999999999999999999999999999999999999999999999888654
Q ss_pred ccccccccCCCchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEE
Q psy12972 354 HSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVK 433 (1578)
Q Consensus 354 ~~~~~~~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVK 433 (1578)
.++|++|||.+++++|++||++||||||+||||+|++++|+.||||
T Consensus 146 ----------------------------------~~i~e~ElG~~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVK 191 (538)
T KOG1235|consen 146 ----------------------------------FKIFEEELGAPIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVK 191 (538)
T ss_pred ----------------------------------HHHHHHHhCCCHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEE
Confidence 4578899999999999999999999999999999999999999999
Q ss_pred EecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCC---CeeecEEee
Q psy12972 434 VQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLP---YVYIPRILW 510 (1578)
Q Consensus 434 Vq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~---~v~vP~v~~ 510 (1578)
|||||+++.+..|+.+++.+++++.+++|.+++.|+++|+++++.+||||.+||+|+++++++|++.+ .|+||+|||
T Consensus 192 VQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~ 271 (538)
T KOG1235|consen 192 VQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYW 271 (538)
T ss_pred ecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 799999999
Q ss_pred CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhh
Q psy12972 511 DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 511 ~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~ 590 (1578)
++||+|||||||++|++++|+..+.+.|+++.+++..+.+++++|||.+||||||||||||+++... -...+++++
T Consensus 272 ~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaDPHPGNilv~~~~----~~~~~ivll 347 (538)
T KOG1235|consen 272 DLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHADPHPGNILVRPNP----EGDEEIVLL 347 (538)
T ss_pred hcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCCCCCCcEEEecCC----CCCccEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999976322 234466666
Q ss_pred hhcccCCCCCCCCCCccccCcccchhhhHHHHHHhh
Q psy12972 591 TTLREDGYPDSGEWNPLEESPRMNFNLIMLWYTFLL 626 (1578)
Q Consensus 591 ~~~~~~g~~D~G~~~~l~~~~r~~~~l~~lw~~~~l 626 (1578)
|||+|+.|+...|.+ ++.+|++++.
T Consensus 348 ---------DhGl~~~is~~~r~~--~~~~~~a~~~ 372 (538)
T KOG1235|consen 348 ---------DHGLYAVISHKTRKD--YAELWLALVF 372 (538)
T ss_pred ---------cccccccccHHHHHH--HHHHHHHHhc
Confidence 999999987665555 4789999875
No 2
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-63 Score=609.22 Aligned_cols=316 Identities=34% Similarity=0.490 Sum_probs=277.2
Q ss_pred HHHHHHHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCC
Q psy12972 284 ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE 363 (1578)
Q Consensus 284 ~~~h~r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~ 363 (1578)
....++.|+|++.++++|||+|||+||+||||+|++|++|+++|++|||+|||.|++++
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~--------------------- 109 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEA--------------------- 109 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHH---------------------
Confidence 34556789999999999999999999999999999999999999999999999887654
Q ss_pred CchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhH
Q psy12972 364 NPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERF 443 (1578)
Q Consensus 364 ~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~ 443 (1578)
+++|+++||.+++++|++||++|||||||||||+|++++|++|||||||||+++.+
T Consensus 110 ------------------------~~iie~eLG~~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i 165 (517)
T COG0661 110 ------------------------ERIIEEELGRPIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERI 165 (517)
T ss_pred ------------------------HHHHHHHhCCCHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHH
Confidence 45678899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEE
Q psy12972 444 VGDIATVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTT 520 (1578)
Q Consensus 444 ~~Dl~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVM 520 (1578)
..|+.+|+.+++++.+++|. +++.++++|+.+.+..|+||++||+|+++|+++|++.+.|+||+|||++||++||||
T Consensus 166 ~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtm 245 (517)
T COG0661 166 EADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTM 245 (517)
T ss_pred HHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEE
Confidence 99999999999999999887 899999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCC
Q psy12972 521 EFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPD 600 (1578)
Q Consensus 521 E~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D 600 (1578)
||++|++++|...+..+|.|.+.++..++++|++|++.+||||||||||||++.. | ++++++ |
T Consensus 246 E~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaDpHpGNi~v~~----~----g~i~~l---------D 308 (517)
T COG0661 246 EWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHADPHPGNILVRS----D----GRIVLL---------D 308 (517)
T ss_pred EeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccCCCccceEEec----C----CcEEEE---------c
Confidence 9999999999999999999999999999999999999999999999999999651 1 345444 9
Q ss_pred CCCCCccccCcccchhhhHHHHHHhhhhhhhhccccCCCcccccc-cccCCHHHHHHHhhhhhhhcCC
Q psy12972 601 SGEWNPLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYETLGV-PRTASLQEIRKNYKRLVVEWHP 667 (1578)
Q Consensus 601 ~G~~~~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~iLgv-~~~as~~eIk~ayr~l~~~~HP 667 (1578)
||++++|++..|..+ ..+|++++....- .-...+.-+|. ++..+.+.+.++.+.....++-
T Consensus 309 fGi~g~l~~~~r~~l--~~~~~a~~~rD~~----~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~~~ 370 (517)
T COG0661 309 FGIVGRLDPKFRRYL--AELLLAFLNRDYD----RVAELHVELGYVPPDTDRDPLAAAIRAVLEPIYG 370 (517)
T ss_pred CcceecCCHHHHHHH--HHHHHHHHhhCHH----HHHHHHHHhCCCCCccchHHHHHHHHHHHHhhhC
Confidence 999999877766554 5666565422110 01111222453 6678888899999888776643
No 3
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.5e-55 Score=543.55 Aligned_cols=308 Identities=25% Similarity=0.375 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhH
Q psy12972 289 RSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAA 368 (1578)
Q Consensus 289 r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~ 368 (1578)
..|+|++.+++++||+|||+||+||||+|++|++|+++|++|||+|||.|++++
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~-------------------------- 103 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALA-------------------------- 103 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHH--------------------------
Confidence 468999999999999999999999999999999999999999999999887654
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDI 447 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl 447 (1578)
+++++++||.+++++|++||++|+|||||||||+|++++ |++||||||||++.+.+..|+
T Consensus 104 -------------------~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl 164 (537)
T PRK04750 104 -------------------RAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADL 164 (537)
T ss_pred -------------------HHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHH
Confidence 456788899999999999999999999999999999997 999999999999999999999
Q ss_pred HHHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccC
Q psy12972 448 ATVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFID 524 (1578)
Q Consensus 448 ~~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~ 524 (1578)
.+|+.++++++++.|. ++..++++|+.+.+.+|+||.+||+|+.+++++|++.+.|+||+|||+|||++||||||++
T Consensus 165 ~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~ 244 (537)
T PRK04750 165 ALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMY 244 (537)
T ss_pred HHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeec
Confidence 9999999999987664 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCCCCCC
Q psy12972 525 GVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEW 604 (1578)
Q Consensus 525 G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~ 604 (1578)
|.+++++..+.+.|.+++.+++.+++.++.|+|.+||||||||||||+++ .|-+..++++++ |+|++
T Consensus 245 G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGNIlv~----~~g~~~~~i~ll---------DFGiv 311 (537)
T PRK04750 245 GIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGNIFVS----YDPPENPRYIAL---------DFGIV 311 (537)
T ss_pred CccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHHeEEe----cCCCCCCeEEEE---------ecceE
Confidence 99999987778889999999999999999999999999999999999964 121122344444 99999
Q ss_pred CccccCcccchhhhHHHHHHhhhhhhhhccccCCCccc------ccc-cccCCHHHHHHHhhhhhhhcC
Q psy12972 605 NPLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYET------LGV-PRTASLQEIRKNYKRLVVEWH 666 (1578)
Q Consensus 605 ~~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~i------Lgv-~~~as~~eIk~ayr~l~~~~H 666 (1578)
+.|++.+|..+ ..++.+++ ..|+.++ +|. +++.+.++++++-+.+...+.
T Consensus 312 g~l~~~~r~~l--~~~~~a~~----------~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~ 368 (537)
T PRK04750 312 GSLNKEDKRYL--AENFLAFF----------NRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCEPIF 368 (537)
T ss_pred EECCHHHHHHH--HHHHHHHH----------hcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 99877666543 33444433 3344433 453 557788888888777766554
No 4
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=6.7e-52 Score=509.27 Aligned_cols=310 Identities=30% Similarity=0.427 Sum_probs=261.1
Q ss_pred HHHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhH
Q psy12972 289 RSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAA 368 (1578)
Q Consensus 289 r~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~ 368 (1578)
..|++++++++++||+|||+||++|||+|+||++|+++|++|||++||+||++++
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~------------------------- 102 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVAR------------------------- 102 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHH-------------------------
Confidence 4589999999999999999999999999999999999999999999998887554
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIA 448 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~ 448 (1578)
++++++||.+++++|++||++|||||||||||+|++++|++||||||||++.+.+..|+.
T Consensus 103 --------------------~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~ 162 (437)
T TIGR01982 103 --------------------KVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIA 162 (437)
T ss_pred --------------------HHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHH
Confidence 467788999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCCC---CCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCC
Q psy12972 449 TVQTLLRIAGFLYPK---FDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDG 525 (1578)
Q Consensus 449 ~l~~l~~~~~~~~~~---~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G 525 (1578)
+|+.++++++++.+. +++..+++|+.+.+.+|+||.+||+|++++++++++.+.|+||++|+++|+++||||||++|
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G 242 (437)
T TIGR01982 163 LLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDG 242 (437)
T ss_pred HHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECC
Confidence 999999999887663 68899999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCchhhhhhhhhcccCCCCCCCCCC
Q psy12972 526 VKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDKFRLVLATTLREDGYPDSGEWN 605 (1578)
Q Consensus 526 ~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~~ 605 (1578)
.++.++......+.+...++..+++.++.|+|.+|+||||||||||++.. + +++++ +|+|+++
T Consensus 243 ~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~------~--g~i~l---------iDfG~~~ 305 (437)
T TIGR01982 243 IPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGNIFVLK------D--GKIIA---------LDFGIVG 305 (437)
T ss_pred cccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECC------C--CcEEE---------EeCCCee
Confidence 99999876656677888999999999999999999999999999999531 1 12333 3777777
Q ss_pred ccccCcccchhhhHHHHHHhhhhhhhhccccCCCcccccc-cccCCHHHHHHHhhhhhhhcC
Q psy12972 606 PLEESPRMNFNLIMLWYTFLLNVLFINCAVSLDPYETLGV-PRTASLQEIRKNYKRLVVEWH 666 (1578)
Q Consensus 606 ~l~~~~r~~~~l~~lw~~~~l~~~~~~~~~~~d~y~iLgv-~~~as~~eIk~ayr~l~~~~H 666 (1578)
.++...|.. +..++.+++.... ....+...-+|. +++++.+.+++..+.+...+.
T Consensus 306 ~l~~~~r~~--l~~l~~a~~~~D~----~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~ 361 (437)
T TIGR01982 306 RLSEEDRRY--LAEILYGFLNRDY----RRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIF 361 (437)
T ss_pred ECCHHHHHH--HHHHHHHHHhcCH----HHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 765544433 3445544332221 111122223454 456777888888877776655
No 5
>KOG1236|consensus
Probab=100.00 E-value=3.8e-42 Score=392.46 Aligned_cols=280 Identities=19% Similarity=0.223 Sum_probs=240.2
Q ss_pred HHHHHHHHHHhcCcchhhHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCcccccccccCCCchhHH
Q psy12972 290 SANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAA 369 (1578)
Q Consensus 290 ~a~~l~~~~~~~Gg~yiKlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~~ 369 (1578)
.-+-|+++++..||+|||||||+|||+|+||+++|.+|++||.+++||||..+++.+..+||
T Consensus 120 W~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~------------------ 181 (565)
T KOG1236|consen 120 WLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFG------------------ 181 (565)
T ss_pred HHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHC------------------
Confidence 34567889999999999999999999999999999999999999999999988776554443
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-------C---------CCEEEEE
Q psy12972 370 SLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-------E---------GVEVAVK 433 (1578)
Q Consensus 370 ~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-------~---------G~~VAVK 433 (1578)
++++++||.+|++.|||+|||||||+|+++ + .+.||||
T Consensus 182 --------------------------~~~~~eiF~efn~~PIGsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiK 235 (565)
T KOG1236|consen 182 --------------------------VKKIEEIFSEFNREPIGSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIK 235 (565)
T ss_pred --------------------------cCcHHHHHHhcCCcccccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeee
Confidence 126899999999999999999999999864 1 2689999
Q ss_pred EecchhhhhHHHHHHHHHHHHHHHhhhCC--CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC
Q psy12972 434 VQYIDLRERFVGDIATVQTLLRIAGFLYP--KFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD 511 (1578)
Q Consensus 434 Vq~P~i~~~~~~Dl~~l~~l~~~~~~~~~--~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~ 511 (1578)
|.||+++++++.|+.+|++.+++..+++. .+++...++.|...+..++|.++||.++.+|..+|++...|.+|+|+..
T Consensus 236 v~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~~vkqF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~ 315 (565)
T KOG1236|consen 236 VLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPLEVKQFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAP 315 (565)
T ss_pred ccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcchHHHHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCccccc
Confidence 99999999999999999999999997643 3577788999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEeccCCCcCCchhhHhhcCCC---HHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCCeeEEecCCch----
Q psy12972 512 KSSTRVLTTEFIDGVKISDKEGLLEKGFS---LADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNTWLYPVDLGDK---- 584 (1578)
Q Consensus 512 ~~t~~VLVME~i~G~~l~d~~~l~~~~~~---~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~~v~liDfG~~---- 584 (1578)
++++.||+.+|++|.++.....- .+.. .++++....+++++|++.++|+|+|+|||||+++...-+|-+..
T Consensus 316 ~~~~~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~ 393 (565)
T KOG1236|consen 316 LHTDLVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKA 393 (565)
T ss_pred ccccceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCCCccccccccc
Confidence 99999999999999999876432 2222 35788889999999999999999999999999765444333321
Q ss_pred ----------------------hhhhhhhhcccCCCCCCCCCCccccCcccch
Q psy12972 585 ----------------------FRLVLATTLREDGYPDSGEWNPLEESPRMNF 615 (1578)
Q Consensus 585 ----------------------~~l~l~~~~~~~g~~D~G~~~~l~~~~r~~~ 615 (1578)
.+..+++..++..|+|.|+++.|+..+++|+
T Consensus 394 e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv~kLs~qn~~N~ 446 (565)
T KOG1236|consen 394 EKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIVTKLSHQNQMNL 446 (565)
T ss_pred hhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhhhccChhhHHHH
Confidence 2233455567778999999999999999886
No 6
>KOG4277|consensus
Probab=100.00 E-value=5.9e-40 Score=355.59 Aligned_cols=355 Identities=13% Similarity=0.179 Sum_probs=286.4
Q ss_pred ccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccC
Q psy12972 869 PKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKE 946 (1578)
Q Consensus 869 ~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~ 946 (1578)
+.+.+..|+|.||||||+|||++.|.|.++..++++.| |++|++||+..+.+|++|||+| ||||++|++|..+.|.
T Consensus 39 dnkdddiW~VdFYAPWC~HCKkLePiWdeVG~elkdig~PikVGKlDaT~f~aiAnefgiqG-YPTIk~~kgd~a~dYR- 116 (468)
T KOG4277|consen 39 DNKDDDIWFVDFYAPWCAHCKKLEPIWDEVGHELKDIGLPIKVGKLDATRFPAIANEFGIQG-YPTIKFFKGDHAIDYR- 116 (468)
T ss_pred hcccCCeEEEEeechhhhhcccccchhHHhCcchhhcCCceeecccccccchhhHhhhccCC-CceEEEecCCeeeecC-
Confidence 34668899999999999999999999999999998766 9999999999999999999998 9999999999888877
Q ss_pred CCCCHHHHHHHHHhhCCCccccccccccHH-HHhhcccCCCcEEEEEeccCCchHHHHHHHHhhcCCCeEEEEEEcccCC
Q psy12972 947 PSFSVQKMVEFFRLKLPYKLIVPLSATNVD-AFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQED 1025 (1578)
Q Consensus 947 G~~s~~~L~~fi~~~lp~~vv~~it~~~~~-~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~ 1025 (1578)
|+|+.+.|++|..+-..+ ++..++.++.+ .-++.. ..|+.+||+..+.|....+..|++.+-.+...|. .
T Consensus 117 G~R~Kd~iieFAhR~a~a-iI~pi~enQ~~fehlq~R---hq~ffVf~Gtge~PL~d~fidAASe~~~~a~FfS-----a 187 (468)
T KOG4277|consen 117 GGREKDAIIEFAHRCAAA-IIEPINENQIEFEHLQAR---HQPFFVFFGTGEGPLFDAFIDAASEKFSVARFFS-----A 187 (468)
T ss_pred CCccHHHHHHHHHhcccc-eeeecChhHHHHHHHhhc---cCceEEEEeCCCCcHHHHHHHHhhhheeeeeeec-----c
Confidence 889999999999887754 56666654433 334443 7899999999999999999999876655554444 5
Q ss_pred ChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecCC
Q psy12972 1026 SSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDS 1105 (1578)
Q Consensus 1026 ~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~~ 1105 (1578)
+++++..++-.+..|.+.|||++.... ...-+...|..||+.+++|-+-..++.+..+... .++++++.+.+.+
T Consensus 188 seeVaPe~~~~kempaV~VFKDetf~i-----~de~dd~dLseWinRERf~~fLa~dgflL~EiG~-sGKLVaLaVidEk 261 (468)
T KOG4277|consen 188 SEEVAPEENDAKEMPAVAVFKDETFEI-----EDEGDDEDLSEWINRERFPGFLAADGFLLAEIGA-SGKLVALAVIDEK 261 (468)
T ss_pred ccccCCcccchhhccceEEEccceeEE-----EecCchhHHHHHHhHhhccchhhcccchHHHhCc-CCceEEEEEeccc
Confidence 677777777777889999998753222 1223456799999999999999999988877765 6788888886544
Q ss_pred c------chHHHHHHHHHHHhhccCCC-----CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEee
Q psy12972 1106 P------EHDASRHTLRRFAQESRFVH-----NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGW 1174 (1578)
Q Consensus 1106 ~------~~~~~~~~lr~vA~~~~~~~-----~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~ 1174 (1578)
. ++.+......++|++ +++ ++++|+|+|+ .++++.+.|.. ...|.+++.|++...|.+
T Consensus 262 hk~nns~eh~~~~ki~eEaakd--~Rd~pdfh~dFQF~hlDG---nD~~nqilM~a------ls~P~l~i~NtsnqeYfL 330 (468)
T KOG4277|consen 262 HKFNNSSEHREFHKIAEEAAKD--LRDHPDFHNDFQFAHLDG---NDLANQILMAA------LSEPHLFIFNTSNQEYFL 330 (468)
T ss_pred cccCCcchhHHHHHHHHHHHHH--HHhChhhhhhceeeccch---hHHHHHHHHHh------hcCCeEEEEecCchheee
Confidence 2 223333344445555 444 3599999999 77888886665 678999999999988876
Q ss_pred ccCCcccccccccccHHHHHHHhhh----hhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHHHHHhhccccch
Q psy12972 1175 LLGDAVDDWKDYNTTKDRLDAGLRS----LVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLSRQHIL 1250 (1578)
Q Consensus 1175 l~~~~~~~~~~~~~t~e~l~~fL~~----ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~~~~~~~~~~~l 1250 (1578)
-+. .....+-+.+..||+. +.+++.. ..+|..+++|++|..+.+..++..++..+|+|
T Consensus 331 se~------d~qikniedilqFientsegI~d~Tie------------A~GGd~iLqRiKRiaFdaksnIaqiF~sqPLl 392 (468)
T KOG4277|consen 331 SED------DPQIKNIEDILQFIENTSEGIDDETIE------------AFGGDHILQRIKRIAFDAKSNIAQIFASQPLL 392 (468)
T ss_pred ccC------ChhhhhHHHHHHHHhccccccccccee------------ecCchHHHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 443 3567778888899987 5555554 78899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q psy12972 1251 PAVSLIFTVIIIVVLAMIM 1269 (1578)
Q Consensus 1251 ~~~s~~~~~~fi~~~~y~i 1269 (1578)
.|+++++|++||+++||+|
T Consensus 393 gc~LFGlPi~~iSIiCYgI 411 (468)
T KOG4277|consen 393 GCCLFGLPIAFISIICYGI 411 (468)
T ss_pred hhhhhcCcHHHhhhheeee
Confidence 9999999999999999999
No 7
>KOG0190|consensus
Probab=100.00 E-value=3e-32 Score=326.52 Aligned_cols=334 Identities=15% Similarity=0.207 Sum_probs=272.9
Q ss_pred eEEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccC
Q psy12972 853 FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 853 ~~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
-.+++||.+||.+.| ..+..++|.|||||||||++++|+|+++|+.|+.. .+.+++|||+++.++|++|+|+| |
T Consensus 25 ~~Vl~Lt~dnf~~~i---~~~~~vlVeFYAPWCghck~LaPey~kAA~~Lke~~s~i~LakVDat~~~~~~~~y~v~g-y 100 (493)
T KOG0190|consen 25 EDVLVLTKDNFKETI---NGHEFVLVEFYAPWCGHCKALAPEYEKAATELKEEGSPVKLAKVDATEESDLASKYEVRG-Y 100 (493)
T ss_pred cceEEEecccHHHHh---ccCceEEEEEEchhhhhhhhhCcHHHHHHHHhhccCCCceeEEeecchhhhhHhhhcCCC-C
Confidence 357889999999998 66789999999999999999999999999999876 49999999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhhc
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKH 1010 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~ 1010 (1578)
||+.+|++|.....|.|+|++++|+.|++++.+|+...+.+.+.++.|+.+. +..++++|.+.....-.++..+...
T Consensus 101 PTlkiFrnG~~~~~Y~G~r~adgIv~wl~kq~gPa~~~l~~~~~a~~~l~~~---~~~vig~F~d~~~~~~~~~~~a~~l 177 (493)
T KOG0190|consen 101 PTLKIFRNGRSAQDYNGPREADGIVKWLKKQSGPASKTLKTVDEAEEFLSKK---DVVVIGFFKDLESLAESFFDAASKL 177 (493)
T ss_pred CeEEEEecCCcceeccCcccHHHHHHHHHhccCCCceecccHHHHHhhccCC---ceEEEEEecccccchHHHHHHHHhc
Confidence 9999999999755556999999999999999998888887889999999886 8899999987777767777788899
Q ss_pred CCCeEEEEEEcccCCChhHHhhcCCCCC-CcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhh
Q psy12972 1011 RTTIVFGVIVYDQEDSSSVFQRFKVPGD-KDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDA 1089 (1578)
Q Consensus 1011 ~~~v~Fg~v~~~~~~~~~l~~kf~V~~~-~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~ 1089 (1578)
++.+.|+.+ ++.+++++++++.. .+.+++++...+....+ .+++....|..||..+++|++.++|.++.-..
T Consensus 178 ~~d~~F~~t-----s~~~~~~~~~~~~~~~~~i~l~kk~d~~~~~~--~~~~~~~~l~~Fi~~~~~plv~~ft~~~~~~~ 250 (493)
T KOG0190|consen 178 RDDYKFAHT-----SDSDVAKKLELNTEGTFPIVLFKKFDELLVKY--DGSFTPELLKKFIQENSLPLVTEFTVANNAKI 250 (493)
T ss_pred cccceeecc-----CcHhHHhhccCCCCCcceEEeccccccchhhc--ccccCHHHHHHHHHHhcccccceeccccccee
Confidence 999999977 78899999988631 23477776655544444 66777778999999999999999998665444
Q ss_pred cCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccce-eEEEEEcC
Q psy12972 1090 VCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHI-AAMWRMDY 1167 (1578)
Q Consensus 1090 ~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~l-p~l~~~n~ 1167 (1578)
....-.+-++++.. .....+.++..++++|++ |+++ ++|+++|.+..+..++.|.+.+ .+. +.++.++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~vAk~--f~~~-l~Fi~~d~e~~~~~~~~~Gl~~------~~~~~~~v~~~~ 321 (493)
T KOG0190|consen 251 YSSFVKLGLDFFVFFKCNRFEELRKKFEEVAKK--FKGK-LRFILIDPESFARVLEFFGLEE------EQLPIRAVILNE 321 (493)
T ss_pred eccccccceeEEeccccccHHHHHHHHHHHHHh--cccc-eEEEEEChHHhhHHHHhcCccc------ccCCeeEEeecc
Confidence 43212445555553 334778999999999999 9996 9999999988888888885443 222 46666677
Q ss_pred CcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhhH
Q psy12972 1168 KKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLG 1226 (1578)
Q Consensus 1168 ~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~ 1226 (1578)
++.+|.+-.+ +.+.++|+.|+..++.|... |.+.++.+|..+
T Consensus 322 ~~~Ky~~~~e---------~~~~~~ie~f~~~~l~Gk~~--------p~~kSqpiPe~~ 363 (493)
T KOG0190|consen 322 DGSKYPLEEE---------ELDQENIESFVKDFLDGKVK--------PHLKSQPIPEDN 363 (493)
T ss_pred ccccccCccc---------cccHHHHHHHHHHHhcCccc--------cccccCCCCccc
Confidence 7788875443 35667899999999999998 888888888764
No 8
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=348.16 Aligned_cols=145 Identities=22% Similarity=0.282 Sum_probs=134.8
Q ss_pred HHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccc
Q psy12972 83 ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE 162 (1578)
Q Consensus 83 ~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~ 162 (1578)
.....+.|++|+.+|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++|+++||++++++|++||+
T Consensus 51 ~~~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~ 130 (517)
T COG0661 51 EELREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEP 130 (517)
T ss_pred HHHhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCC
Confidence 34556889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccCccCCCC---hhhhHhh
Q psy12972 163 NPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEATNERPD---HEFHEAT 227 (1578)
Q Consensus 163 ~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 227 (1578)
+|||||||||||+ +|++||||||||||++.|++||++|+.++...+..++..-+-+|. .||.+.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l 202 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRL 202 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHH
Confidence 9999999999999 899999999999999999999999999999999999886666665 3555544
No 9
>KOG1235|consensus
Probab=99.97 E-value=3.9e-32 Score=332.58 Aligned_cols=144 Identities=33% Similarity=0.388 Sum_probs=136.1
Q ss_pred CCCCcchhhHHHHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC
Q psy12972 72 DEDSEYYPSILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGC 151 (1578)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~ 151 (1578)
....+.........|.+.|++|+++|+.|||+|||+||++|||+|++|+||.++|+.|||++||+|++++.++|++|||.
T Consensus 76 ~~~~e~~~~~~~~~~~~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~ 155 (538)
T KOG1235|consen 76 LASSESRLSKLSKVLLSAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGA 155 (538)
T ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCC
Confidence 34455555667788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred Chhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccCc
Q psy12972 152 THSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEAT 215 (1578)
Q Consensus 152 ~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~~ 215 (1578)
+++++|++||++|||||||||||| +|++||||||||||++.+..|+.+++.+....+..|++++
T Consensus 156 ~ie~if~~f~~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~ 223 (538)
T KOG1235|consen 156 PIEDIFSEFDEEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFD 223 (538)
T ss_pred CHHHHHHhcCcchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 999999999999999999999999 9999999999999999999999999999999999988776
No 10
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.97 E-value=3.4e-31 Score=328.88 Aligned_cols=175 Identities=14% Similarity=0.177 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhccCCCCCCcchhh--HH---HHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCCh
Q psy12972 46 GIKRFIRSSYTVAVISFDYWWSLRDIDEDSEYYPS--IL---ASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPR 120 (1578)
Q Consensus 46 ~~~R~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~ 120 (1578)
.+.|+.+|+++++++++++................ .| .......|++++.+|++|||+|||+||+||||+|++|+
T Consensus 3 ~~~R~~~I~~v~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~ 82 (537)
T PRK04750 3 ELFRLYKIIRVFLRYGLDELILSHRLTRPLRLWRRSLFWMPNRHKDKPRGERLRLALEELGPIFVKFGQMLSTRRDLFPP 82 (537)
T ss_pred hhHHHHHHHHHHHHhChHHHhhhccccchhhhhhhhhhhhhcccccccHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCH
Confidence 46799999999999999987643222211100000 00 11122569999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----C-CCEEEEEEeCCCchhhHHh
Q psy12972 121 QYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----T-DEALGIKLHEFHEATNERP 195 (1578)
Q Consensus 121 ~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~-g~~vavKv~~p~v~~~i~~ 195 (1578)
+|+++|++|||+|||+|+++++++|+++||.+++++|++||++|+|||||||||+ + |++||||||||||++.|..
T Consensus 83 ~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~ 162 (537)
T PRK04750 83 DIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDA 162 (537)
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 5 9999999999999999999
Q ss_pred hHHHHHhhccCCCccCccCccCCCC
Q psy12972 196 DHEFHEATNERPDHEFHEATNERPD 220 (1578)
Q Consensus 196 Dl~~~~~~~~~~~~~~~~~~~~~~~ 220 (1578)
||++|+.++...+..+++...-+|.
T Consensus 163 Dl~~l~~~a~~l~~~~~~~~~l~~~ 187 (537)
T PRK04750 163 DLALMYRLARWVERLLPDGRRLKPR 187 (537)
T ss_pred HHHHHHHHHHHHHHhCcccccCCHH
Confidence 9999999999999999887776664
No 11
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.97 E-value=6e-31 Score=324.03 Aligned_cols=173 Identities=18% Similarity=0.157 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhc-cCCCCCCcchh-----hHHHHHhHHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCCh
Q psy12972 47 IKRFIRSSYTVAVISFDYWWSL-RDIDEDSEYYP-----SILASVHQRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPR 120 (1578)
Q Consensus 47 ~~R~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~ 120 (1578)
+.|+.+|+.+++++++++.... ........... ..........|+++++++++|||+|||+||+||||+|++|+
T Consensus 1 ~~R~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~ 80 (437)
T TIGR01982 1 LRRLRRIIRVLIRYGFLALVESPIGPLSLRLLRRLLLPFSNRENRLMSRGERLRLALEELGPTFIKFGQTLSTRADLLPA 80 (437)
T ss_pred CHHHHHHHHHHHHhCcHHHhhhhcccchhhhHhhhhhhhcccccccccHHHHHHHHHHHcCchhHHHhHHHHhCcccCCH
Confidence 4699999999999999986643 11100000000 00011123569999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhh
Q psy12972 121 QYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPD 196 (1578)
Q Consensus 121 ~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~D 196 (1578)
+|+++|++|||+|||+|+++++++|+++||++++++|++||++|+|||||||||+ +|++||||||||||++.|..|
T Consensus 81 ~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~D 160 (437)
T TIGR01982 81 DIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAAD 160 (437)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHhhccCCCccCccCccCCC
Q psy12972 197 HEFHEATNERPDHEFHEATNERP 219 (1578)
Q Consensus 197 l~~~~~~~~~~~~~~~~~~~~~~ 219 (1578)
+++|+.++...+..++.....++
T Consensus 161 l~~l~~~~~~~~~~~~~~~~~~~ 183 (437)
T TIGR01982 161 IALLYRLARIVERLSPDSRRLRP 183 (437)
T ss_pred HHHHHHHHHHHHHhCccccccCH
Confidence 99999999988888776554443
No 12
>KOG1234|consensus
Probab=99.95 E-value=1.8e-29 Score=275.83 Aligned_cols=214 Identities=27% Similarity=0.399 Sum_probs=196.0
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHH
Q psy12972 369 ASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIA 448 (1578)
Q Consensus 369 ~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~ 448 (1578)
..|.+++..-|..+|.+++.+++..++|.+|.+-|++||+.|.|+|||||||+|++++|++||||||+||+.+.++.|+.
T Consensus 15 ~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQYPGva~sI~SD~~ 94 (363)
T KOG1234|consen 15 GQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQYPGVARSIDSDAN 94 (363)
T ss_pred HHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecCCCchhhhccCcHH
Confidence 45667777778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcC
Q psy12972 449 TVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKI 528 (1578)
Q Consensus 449 ~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l 528 (1578)
.+..++.+.+.++..+-+..+++-.++.|..|.||++||+.+.+|+..+++.+.++||.|+.++||.|||+||++.|.+|
T Consensus 95 nl~~lLn~s~llPkGLFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~Elct~rvlt~el~~G~pi 174 (363)
T KOG1234|consen 95 NLSRLLNFSGLLPKGLFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVDELCTVRVLTLELGQGLPI 174 (363)
T ss_pred HHHHHHhhcccccccccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHHhhccchhhhhhhhcCccc
Confidence 99999998888877888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCCCCCC----eeEEecCCch
Q psy12972 529 SDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDK 584 (1578)
Q Consensus 529 ~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~ 584 (1578)
.....+.+ ..+..|+..+++.+++.||...|...||.-+|++.+ ++.++|||..
T Consensus 175 d~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~~tk~i~LlDFGAs 232 (363)
T KOG1234|consen 175 DKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNGRTKKIELLDFGAS 232 (363)
T ss_pred hhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCCCcceEEEEecccc
Confidence 87644322 235679999999999999999999999999999954 4788888865
No 13
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.94 E-value=1.4e-27 Score=242.22 Aligned_cols=117 Identities=39% Similarity=0.625 Sum_probs=113.6
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCC--CCHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPK--FDFQWVI 470 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~--~~~~~~~ 470 (1578)
++||++++++|++||++|||||||||||+|++++|++||||||||++++.+..|+.+|+.+++++.++.+. +++.+++
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~ 80 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFRRLDLEEIV 80 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHcccccccCHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999998776 8999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEe
Q psy12972 471 NELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRIL 509 (1578)
Q Consensus 471 ~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~ 509 (1578)
+++++.+.+|+||++||+|+++|++++++.+.|+||+||
T Consensus 81 ~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 81 DEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 999999999999999999999999999999999999987
No 14
>TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic. Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs).
Probab=99.93 E-value=7.4e-25 Score=273.93 Aligned_cols=395 Identities=16% Similarity=0.240 Sum_probs=287.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++++|.++|.+.+ +.+++++|.||||||++|+++.|.|.++|+.+++.+ +.+++|||+.+.++|++++|.+ +||
T Consensus 3 v~~l~~~~~~~~i---~~~~~~~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~-~Pt 78 (462)
T TIGR01130 3 VLVLTKDNFDDFI---KSHEFVLVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDATEEKDLAQKYGVSG-YPT 78 (462)
T ss_pred ceECCHHHHHHHH---hcCCCEEEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECCCcHHHHHhCCCcc-ccE
Confidence 4578999999877 446799999999999999999999999999987654 9999999999999999999998 999
Q ss_pred EEEEcCCcc-ccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hc
Q psy12972 933 IALLTDGRT-SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KH 1010 (1578)
Q Consensus 933 l~lf~~G~~-~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~ 1010 (1578)
+++|++|+. ...+.|.++.++|.+|+.+.+++++....+.++++.++... +..+++||.+...+....+..++ .+
T Consensus 79 ~~~~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~~~~---~~~vi~~~~~~~~~~~~~~~~~a~~~ 155 (462)
T TIGR01130 79 LKIFRNGEDSVSDYNGPRDADGIVKYMKKQSGPAVKEIETVADLEAFLADD---DVVVIGFFKDLDSELNDTFLSVAEKL 155 (462)
T ss_pred EEEEeCCccceeEecCCCCHHHHHHHHHHhcCCCceeecCHHHHHHHHhcC---CcEEEEEECCCCcHHHHHHHHHHHHh
Confidence 999999987 45556999999999999999987766666778899999875 77788888765555555555544 44
Q ss_pred CCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCC--CchhhhhhhhcCCCCCCcccCchhhhh
Q psy12972 1011 RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI--PVPTLQDITDNNPYLTLPRISSQSMLD 1088 (1578)
Q Consensus 1011 ~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l--~~~~L~~fI~~nk~p~vpeLts~~~~~ 1088 (1578)
.+...| ++. ..+..+.++++.. .+++++|+............++. +...|..||..+++|.+++++..++..
T Consensus 156 ~~~~~~-~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fi~~~~~p~v~~~~~~~~~~ 229 (462)
T TIGR01130 156 RDVYFF-FAH---SSDVAAFAKLGAF--PDSVVLFKPKDEDEKFSKVDGEMDTDVSDLEKFIRAESLPLVGEFTQETAAK 229 (462)
T ss_pred hhccce-EEe---cCCHHHHhhcCCC--CCcEEEecccccccccccccCcccCCHHHHHHHHHHcCCCceEeeCCcchhh
Confidence 444442 221 1455677777764 35666675432222211222333 336899999999999999999887655
Q ss_pred hcCCCCceEEEEEecCCc--chHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEc
Q psy12972 1089 AVCPVKKLCVVLFSEDSP--EHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMD 1166 (1578)
Q Consensus 1089 ~~c~~~~lcVll~~~~~~--~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n 1166 (1578)
..- .+.++++++..+.. ..+...+.++++|++ |++..+.|+|+|......+++.+.... ..+|.+++.+
T Consensus 230 ~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~i~f~~~d~~~~~~~~~~~~~~~------~~~P~~vi~~ 300 (462)
T TIGR01130 230 YFE-SGPLVVLYYNVDESLDPFEELRNRFLEAAKK--FRGKFVNFAVADEEDFGRELEYFGLKA------EKFPAVAIQD 300 (462)
T ss_pred HhC-CCCceeEEEEecCCchHHHHHHHHHHHHHHH--CCCCeEEEEEecHHHhHHHHHHcCCCc------cCCceEEEEe
Confidence 543 33455555543322 247888999999999 886459999999988889988873221 3588888888
Q ss_pred CCc-ceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHHHHHhhc
Q psy12972 1167 YKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEMAQQSLS 1245 (1578)
Q Consensus 1167 ~~~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~~~~~~~ 1245 (1578)
..+ .+|....+ ..|.+.|..||+.+++|... |...+|..|.-
T Consensus 301 ~~~~~~y~~~~~---------~~~~~~i~~fi~~~~~g~~~--------~~~~se~~p~~-------------------- 343 (462)
T TIGR01130 301 LEGNKKYPMDQE---------EFSSENLEAFVKDFLDGKLK--------PYLKSEPIPED-------------------- 343 (462)
T ss_pred CCcccccCCCcC---------CCCHHHHHHHHHHHhcCCCC--------eeeccCCCCcc--------------------
Confidence 776 56753221 46889999999999999998 77777766543
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhcccccccCCCccccccccccccccccccccccceeeeeecccccceeeecCCC
Q psy12972 1246 RQHILPAVSLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLVVLLKPG 1325 (1578)
Q Consensus 1246 ~~~~l~~~s~~~~~~fi~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~y~~~~~~lkpg 1325 (1578)
.. . .+..|.+.+|+..| +.+|
T Consensus 344 ~~----------------------------------------~-----------------~v~~l~~~~f~~~v--~~~~ 364 (462)
T TIGR01130 344 DE----------------------------------------G-----------------PVKVLVGKNFDEIV--LDET 364 (462)
T ss_pred CC----------------------------------------C-----------------ccEEeeCcCHHHHh--ccCC
Confidence 01 0 26678888888876 3466
Q ss_pred ceEEEEEEc--ccchHHhHHHHhhceecccc-cceeeeEEEEecc
Q psy12972 1326 CRTLILFID--NKSSRKLVSKFHAMVWPYRK-NKSLMFGYLNIER 1367 (1578)
Q Consensus 1326 ~~~~vl~~~--~~s~~~ll~~f~~~v~~~~~-~~~l~f~~l~~~k 1367 (1578)
.-.+|..-. +.....+.+.|.+..--+++ ++.+.|+.+++++
T Consensus 365 ~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~i~~~~id~~~ 409 (462)
T TIGR01130 365 KDVLVEFYAPWCGHCKNLAPIYEELAEKYKDAESDVVIAKMDATA 409 (462)
T ss_pred CeEEEEEECCCCHhHHHHHHHHHHHHHHhhcCCCcEEEEEEECCC
Confidence 544444442 23335566666665555655 4479999999988
No 15
>KOG0190|consensus
Probab=99.92 E-value=7.1e-26 Score=271.91 Aligned_cols=101 Identities=18% Similarity=0.384 Sum_probs=85.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.+..+||++.+.+. ++.+||.|||||||||++++|.|+++|+.+++. +|.+|++|+|.|.- ...++++ ||||++
T Consensus 370 vvVgknfd~iv~de--~KdVLvEfyAPWCgHCk~laP~~eeLAe~~~~~~~vviAKmDaTaNd~--~~~~~~~-fPTI~~ 444 (493)
T KOG0190|consen 370 VVVGKNFDDIVLDE--GKDVLVEFYAPWCGHCKALAPIYEELAEKYKDDENVVIAKMDATANDV--PSLKVDG-FPTILF 444 (493)
T ss_pred EEeecCHHHHhhcc--ccceEEEEcCcccchhhhhhhHHHHHHHHhcCCCCcEEEEeccccccC--ccccccc-cceEEE
Confidence 45566788877644 788999999999999999999999999999986 49999999998842 3457887 999999
Q ss_pred EcCCc--cccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGR--TSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~--~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+.|. ....|+|.|+.+++..|+.+..
T Consensus 445 ~pag~k~~pv~y~g~R~le~~~~fi~~~a 473 (493)
T KOG0190|consen 445 FPAGHKSNPVIYNGDRTLEDLKKFIKKSA 473 (493)
T ss_pred ecCCCCCCCcccCCCcchHHHHhhhccCC
Confidence 98876 3466679999999999998765
No 16
>KOG1236|consensus
Probab=99.91 E-value=2.1e-24 Score=247.80 Aligned_cols=130 Identities=18% Similarity=0.228 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHhcCcchhhhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCC-Chhhccccccccce
Q psy12972 87 QRSANRILSMCLTNGGLYIKLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGC-THSQLFRSFDENPI 165 (1578)
Q Consensus 87 ~~~a~~l~~~~~~lgg~~iK~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~-~~~~~F~~f~~~Pi 165 (1578)
.-+-+-|+.+++..||+|||||||.|||+|+||+++|.+|++||.+|+|+|+...++.|++++|. .++++|++|++.||
T Consensus 118 ~lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PI 197 (565)
T KOG1236|consen 118 TLWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPI 197 (565)
T ss_pred HHHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCccc
Confidence 45677899999999999999999999999999999999999999999999999999999999997 89999999999999
Q ss_pred eeeeeceeee--------------------CCCEEEEEEeCCCchhhHHhhHHHHHhhccC----CCccCccCcc
Q psy12972 166 AAASLAQSMV--------------------TDEALGIKLHEFHEATNERPDHEFHEATNER----PDHEFHEATN 216 (1578)
Q Consensus 166 asASi~QVh~--------------------~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~----~~~~~~~~~~ 216 (1578)
||+||||||+ ..+.|||||.||+|+++|+.|+.||++.+.. |.+.|.+.|.
T Consensus 198 GsG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~vP~l~wL~l~~ 272 (565)
T KOG1236|consen 198 GSGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNVPDLSWLSLPL 272 (565)
T ss_pred ccchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhcCccccccCcc
Confidence 9999999998 2368999999999999999999999887654 4444554443
No 17
>PTZ00102 disulphide isomerase; Provisional
Probab=99.90 E-value=1.4e-22 Score=254.91 Aligned_cols=316 Identities=16% Similarity=0.198 Sum_probs=232.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
+..++.++|++.+ +.+++++|.||||||++|+++.|.|.++|+.+++. ++.+++|||+.+.++|++|+|.+ |||
T Consensus 34 v~~l~~~~f~~~i---~~~~~~lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i~~-~Pt 109 (477)
T PTZ00102 34 VTVLTDSTFDKFI---TENEIVLVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGVRG-YPT 109 (477)
T ss_pred cEEcchhhHHHHH---hcCCcEEEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCCCc-ccE
Confidence 5678999999977 44679999999999999999999999999988643 39999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hcC
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHR 1011 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~ 1011 (1578)
+++|++|... .+.|.+++++|++|+.+.+.+++..+.+.++...+.... ...+++.|..........+..++ .++
T Consensus 110 ~~~~~~g~~~-~y~g~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~f~~~a~~~~ 185 (477)
T PTZ00102 110 IKFFNKGNPV-NYSGGRTADGIVSWIKKLTGPAVTEVESASEIKLIAKKI---FVAFYGEYTSKDSELYKKFEEVADKHR 185 (477)
T ss_pred EEEEECCceE-EecCCCCHHHHHHHHHHhhCCCceeecCHHHHHHhhccC---cEEEEEEeccCCcHHHHHHHHHHHhcc
Confidence 9999999877 556999999999999999887765555555555554443 55666777766666666665544 566
Q ss_pred CCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcC
Q psy12972 1012 TTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVC 1091 (1578)
Q Consensus 1012 ~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c 1091 (1578)
+...|+.+. +. ..+.+++|+.+.+.... ....+...|.+||..+.+|.+.+++..++....-
T Consensus 186 ~~~~F~~~~-----~~----------~~~~~~~~~~~~~~~~~---~~~~~~~~l~~fI~~~~~P~~~~~~~~~~~~~~~ 247 (477)
T PTZ00102 186 EHAKFFVKK-----HE----------GKNKIYVLHKDEEGVEL---FMGKTKEELEEFVSTESFPLFAEINAENYRRYIS 247 (477)
T ss_pred ccceEEEEc-----CC----------CCCcEEEEecCCCCccc---CCCCCHHHHHHHHHHcCCCceeecCccchHHHhc
Confidence 667776551 11 12466777554332221 1223667899999999999999999988876653
Q ss_pred CCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchH-HHHhccCCCCCCccccceeEEEEEcCCcc
Q psy12972 1092 PVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPE-FVNALTSPEDSSEISLHIAAMWRMDYKKI 1170 (1578)
Q Consensus 1092 ~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~-~~~~f~~~~~~~~~~~~lp~l~~~n~~~~ 1170 (1578)
.++.++++....++.+...+.++++|++ ++++ +.|+|+|++.... +++.| +. ..+|.++..+.. .
T Consensus 248 --~~~~~~~~~~~~~~~~~~~~~~~~~A~~--~~~~-~~f~~vd~~~~~~~~~~~~-------gi-~~~P~~~i~~~~-~ 313 (477)
T PTZ00102 248 --SGKDLVWFCGTTEDYDKYKSVVRKVARK--LREK-YAFVWLDTEQFGSHAKEHL-------LI-EEFPGLAYQSPA-G 313 (477)
T ss_pred --CCccEEEEecCHHHHHHHHHHHHHHHHh--ccCc-eEEEEEechhcchhHHHhc-------Cc-ccCceEEEEcCC-c
Confidence 2344455554445566788899999999 8887 8999999988776 66666 22 246777766643 4
Q ss_pred eEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1171 KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1171 kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
+|...... ....|.+.|..|++.+++|... |.+.+|..|+
T Consensus 314 ~y~~~~~~------~~~~~~~~l~~Fv~~~~~gk~~--------~~~~se~~p~ 353 (477)
T PTZ00102 314 RYLLPPAK------ESFDSVEALIEFFKDVEAGKVE--------KSIKSEPIPE 353 (477)
T ss_pred ccCCCccc------cccCCHHHHHHHHHHHhCCCCC--------cccccCCCCC
Confidence 66532221 1125789999999999999888 5555665553
No 18
>KOG0191|consensus
Probab=99.87 E-value=2.5e-22 Score=244.98 Aligned_cols=186 Identities=24% Similarity=0.420 Sum_probs=152.8
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccccccccCccccccccc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~~ 840 (1578)
..+++|+|+|||||||||+++.|+|++++..+++. .++.++|..+. +|+.+++.|+ ||+.+|..+
T Consensus 45 ~~~~~~~v~fyapwc~~c~~l~~~~~~~~~~l~~~~~~~~vd~~~~~~~~~~y~i~gf-------------Ptl~~f~~~ 111 (383)
T KOG0191|consen 45 KDDSPWLVEFYAPWCGHCKKLAPTYKKLAKALKGKVKIGAVDCDEHKDLCEKYGIQGF-------------PTLKVFRPG 111 (383)
T ss_pred ccCCceEEEEECCCCcchhhhchHHHHHHHHhcCceEEEEeCchhhHHHHHhcCCccC-------------cEEEEEcCC
Confidence 46789999999999999999999999999999994 56777776655 8888888887 666666655
Q ss_pred c-ccCccC----cccce--------------eE-EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHH
Q psy12972 841 F-NFPFEE----HDISL--------------FH-KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMD 900 (1578)
Q Consensus 841 ~-~~~~~~----~~i~~--------------~~-vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~ 900 (1578)
. ...+.+ ..+.. .. +..++..+|...+.+. +..|+|.||+|||+||+.++|+|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~aPwc~~ck~l~~~~~~~a~ 189 (383)
T KOG0191|consen 112 KKPIDYSGPRNAESLAEFLIKELEPSVKKLVEGEVFELTKDNFDETVKDS--DADWLVEFYAPWCGHCKKLAPEWEKLAK 189 (383)
T ss_pred CceeeccCcccHHHHHHHHHHhhccccccccCCceEEccccchhhhhhcc--CcceEEEEeccccHHhhhcChHHHHHHH
Confidence 1 112221 11111 12 5678888998877644 7899999999999999999999999999
Q ss_pred HhCC-CceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc-ccccCCCCCHHHHHHHHHhhCCC
Q psy12972 901 ELSP-LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT-SFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 901 ~l~~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~-~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.++. ..+.++.+||+.+..+|++++|.+ |||+++|++|.. ..++.|.|+.+.|+.|+.+..+.
T Consensus 190 ~~~~~~~v~~~~~d~~~~~~~~~~~~v~~-~Pt~~~f~~~~~~~~~~~~~R~~~~i~~~v~~~~~~ 254 (383)
T KOG0191|consen 190 LLKSKENVELGKIDATVHKSLASRLEVRG-YPTLKLFPPGEEDIYYYSGLRDSDSIVSFVEKKERR 254 (383)
T ss_pred HhccCcceEEEeeccchHHHHhhhhcccC-CceEEEecCCCcccccccccccHHHHHHHHHhhcCC
Confidence 9974 449999999999999999999997 999999998888 78888999999999999877654
No 19
>KOG0713|consensus
Probab=99.82 E-value=1.7e-20 Score=212.60 Aligned_cols=153 Identities=28% Similarity=0.394 Sum_probs=111.7
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCC-
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQ- 710 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~- 710 (1578)
....+|+|++|||+++||..|||+||||||+++|||||+ +|.|++.|++|+.||+|||||++|+.||.+|..+....+
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~ 91 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENK 91 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccc
Confidence 455799999999999999999999999999999999998 699999999999999999999999999999987543221
Q ss_pred CCCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHH
Q psy12972 711 DSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKL 790 (1578)
Q Consensus 711 ~~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~wekl 790 (1578)
..++. +.++..|..+|.. ||+.+.-... +.. ...+.|++.++.-.|.||-...++|+..
T Consensus 92 ~~~~g---~~~~~~f~~~f~d-fg~~~~g~~~-------------~e~----~~~g~~V~~~~e~~~~h~y~~~~~e~~r 150 (336)
T KOG0713|consen 92 DGEGG---GGGNDIFSAFFGD-FGVTVGGNPL-------------EEA----LPKGSDVSSDLEKQLEHFYMGNFVEEVR 150 (336)
T ss_pred ccccC---CcccchHHHhhcc-cccccCCCcc-------------cCC----CCCCceEEeehhhchhhhhcccHHHHHh
Confidence 11111 1114455554443 3332211100 001 2467788999999999999999999998
Q ss_pred HHHhcCCCcceeeeee
Q psy12972 791 MDELSPLGVGFFTVHY 806 (1578)
Q Consensus 791 A~~Lk~~~vg~v~~~~ 806 (1578)
.+-......+...|++
T Consensus 151 ~~~v~~~~~g~~~~~~ 166 (336)
T KOG0713|consen 151 EKGVYKPAPGTRKCNC 166 (336)
T ss_pred ccCceeecCcccccCC
Confidence 7766544444444443
No 20
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=1.4e-20 Score=219.53 Aligned_cols=98 Identities=41% Similarity=0.664 Sum_probs=82.7
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSA 713 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~ 713 (1578)
...|||++|||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||++|+.||++|..+...++...
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 3679999999999999999999999999999999999 899999999999999999999999999999998754222111
Q ss_pred CcccCCCCCCCcccccccCCC
Q psy12972 714 SRNFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~~~~~~f~~~F~~~Fg 734 (1578)
. +|.+++. +|+|||+++||
T Consensus 82 ~-g~~~fgg-~~~DIF~~~Fg 100 (371)
T COG0484 82 F-GFGGFGG-DFGDIFEDFFG 100 (371)
T ss_pred C-CcCCCCC-CHHHHHHHhhc
Confidence 1 3333333 68899999884
No 21
>KOG0912|consensus
Probab=99.77 E-value=1e-17 Score=184.87 Aligned_cols=313 Identities=15% Similarity=0.171 Sum_probs=205.5
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC----CceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP----LGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~----~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+|..|++..+ .....++|-|||+||..++.+.|.|+++|..++. ..+.+|+|||+.+..++.+|.|.. |||+
T Consensus 1 lt~~N~~~il---~s~elvfv~FyAdWCrFSq~L~piF~EAa~~~~~e~P~~kvvwg~VDcd~e~~ia~ky~I~K-yPTl 76 (375)
T KOG0912|consen 1 LTSENIDSIL---DSNELVFVNFYADWCRFSQMLKPIFEEAAAKFKQEFPEGKVVWGKVDCDKEDDIADKYHINK-YPTL 76 (375)
T ss_pred CccccHHHhh---ccceEEeeeeehhhchHHHHHhHHHHHHHHHHHHhCCCcceEEEEcccchhhHHhhhhcccc-Ccee
Confidence 3566777755 4478999999999999999999999999988752 229999999999999999999997 9999
Q ss_pred EEEcCCcccc-ccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhh-cC
Q psy12972 934 ALLTDGRTSF-FKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFK-HR 1011 (1578)
Q Consensus 934 ~lf~~G~~~~-y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~-~~ 1011 (1578)
++|++|.... .|.|.|+.+.|.+||++++..++-+..+-++++..... ....++++|.++.++++..+..++. ++
T Consensus 77 KvfrnG~~~~rEYRg~RsVeaL~efi~kq~s~~i~Ef~sl~~l~n~~~p---~K~~vIgyF~~kdspey~~~~kva~~lr 153 (375)
T KOG0912|consen 77 KVFRNGEMMKREYRGQRSVEALIEFIEKQLSDPINEFESLDQLQNLDIP---SKRTVIGYFPSKDSPEYDNLRKVASLLR 153 (375)
T ss_pred eeeeccchhhhhhccchhHHHHHHHHHHHhccHHHHHHhHHHHHhhhcc---ccceEEEEeccCCCchHHHHHHHHHHHh
Confidence 9999998543 45599999999999999997754444344444444432 2668999999889999888887664 56
Q ss_pred CCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCch-hhhhhhhcCCCCCCcccCchhhhhhc
Q psy12972 1012 TTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVP-TLQDITDNNPYLTLPRISSQSMLDAV 1090 (1578)
Q Consensus 1012 ~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~-~L~~fI~~nk~p~vpeLts~~~~~~~ 1090 (1578)
+.+.|-.-- + ++.....-+ .-.+++|..+...+.. ...++++.. .+..||...-.|++-++|-+|.-+..
T Consensus 154 ~dc~f~V~~-g-----D~~~~~~~~--~~~~~~f~pd~~~~~~-~f~G~~~nf~el~~Wi~dKcvpLVREiTFeN~EELt 224 (375)
T KOG0912|consen 154 DDCVFLVGF-G-----DLLKPHEPP--GKNILVFDPDHSEPNH-EFLGSMTNFDELKQWIQDKCVPLVREITFENAEELT 224 (375)
T ss_pred hccEEEeec-c-----ccccCCCCC--CCceEEeCCCcCCcCc-ccccccccHHHHHHHHHhcchhhhhhhhhccHHHHh
Confidence 777764431 1 111111111 1126667443222221 234555544 68999999999999999988876555
Q ss_pred CCCCceEEEEE-ecCCcchHHHHHHHHH-HHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCC
Q psy12972 1091 CPVKKLCVVLF-SEDSPEHDASRHTLRR-FAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK 1168 (1578)
Q Consensus 1091 c~~~~lcVll~-~~~~~~~~~~~~~lr~-vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~ 1168 (1578)
. .+..-+|++ .+++.+. ...|.. ++++..-....+.|...|+.....-+.-|..+. .++|++.+..-.
T Consensus 225 E-EGlPflILf~~kdD~~s---~k~F~~aI~ReL~~e~~~in~l~ADG~~f~hpL~HlgKs~------~DLPviaIDsF~ 294 (375)
T KOG0912|consen 225 E-EGLPFLILFRKKDDKES---EKIFKNAIARELDDETLAINFLTADGKVFKHPLRHLGKSP------DDLPVIAIDSFR 294 (375)
T ss_pred h-cCCceEEEEecCCcccH---HHHHHHHHHHHhhhhhhccceeecCcceecchHHHhCCCc------ccCcEEEeeccc
Confidence 4 343344445 3333222 222322 333311112237788888877776666663332 578877665533
Q ss_pred c-ceEeeccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1169 K-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1169 ~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
. .-|.+..+ -...-.|..|+..+-+|.-
T Consensus 295 Hmylfp~f~d---------i~~pGkLkqFv~DL~sgkl 323 (375)
T KOG0912|consen 295 HMYLFPDFND---------INIPGKLKQFVADLHSGKL 323 (375)
T ss_pred eeeecCchhh---------hcCccHHHHHHHHHhCchh
Confidence 3 33333222 1233467788877766653
No 22
>PF01216 Calsequestrin: Calsequestrin; InterPro: IPR001393 Calsequestrin is the principal calcium-binding protein present in the sarcoplasmic reticulum of cardiac and skeletal muscle []. It is a highly acidic protein that is able to bind over 40 calcium ions and acts as an internal calcium store in muscle. Sequence analysis has suggested that calcium is not bound in distinct pockets via EF-hand motifs, but rather via presentation of a charged protein surface. Two forms of calsequestrin have been identified. The cardiac form is present in cardiac and slow skeletal muscle and the fast skeletal form is found in fast skeletal muscle. The release of calsequestrin-bound calcium (through a a calcium release channel) triggers muscle contraction. The active protein is not highly structured, more than 50% of it adopting a random coil conformation []. When calcium binds there is a structural change whereby the alpha-helical content of the protein increases from 3 to 11% []. Both forms of calsequestrin are phosphorylated by casein kinase II, but the cardiac form is phosphorylated more rapidly and to a higher degree [].; GO: 0005509 calcium ion binding; PDB: 1SJI_B 2VAF_A 3UOM_C 1A8Y_A 3TRQ_A 3TRP_A 3US3_A.
Probab=99.75 E-value=3.5e-16 Score=176.96 Aligned_cols=323 Identities=15% Similarity=0.191 Sum_probs=215.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCccccccc------H-HHHHHHHHhCCCceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE------P-IFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~------p-~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++.||.+||.+.+ ++.+...|.||.|-- ..+... . ..+-+|+.+...+|+||.||..++..+|+++|+.
T Consensus 36 Vi~LneKNfk~~l---Kkyd~l~l~yh~p~~-~dk~~qkq~~m~E~~LELaAQVlE~~gigfg~VD~~Kd~klAKKLgv~ 111 (383)
T PF01216_consen 36 VIDLNEKNFKRAL---KKYDVLVLYYHEPVE-SDKVSQKQFQMTELVLELAAQVLEDKGIGFGMVDSKKDAKLAKKLGVE 111 (383)
T ss_dssp CEEE-TTTHHHHH---HH-SEEEEEEE--ST-SSHHHHHHHHHHHHHHHHHHHHCGGCTEEEEEEETTTTHHHHHHHT--
T ss_pred eEEcchhHHHHHH---HhhcEEEEEEecCCc-cCHHHHHHHHHHHHHHHHHHHhccccCcceEEeccHHHHHHHHhcCcc
Confidence 5689999999976 446788888888863 333221 2 3455567777788999999999999999999999
Q ss_pred ccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHH
Q psy12972 928 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINA 1007 (1578)
Q Consensus 928 ~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a 1007 (1578)
. .++|.+|++|+.+.|. |.++++-|+.|+...+..++..+.+..+++.|-.-. +...++++|....+..+..+..|
T Consensus 112 E-~~SiyVfkd~~~IEyd-G~~saDtLVeFl~dl~edPVeiIn~~~e~~~Fe~ie--d~~klIGyFk~~~s~~yk~FeeA 187 (383)
T PF01216_consen 112 E-EGSIYVFKDGEVIEYD-GERSADTLVEFLLDLLEDPVEIINNKHELKAFERIE--DDIKLIGYFKSEDSEHYKEFEEA 187 (383)
T ss_dssp S-TTEEEEEETTEEEEE--S--SHHHHHHHHHHHHSSSEEEE-SHHHHHHHHH----SS-EEEEE-SSTTSHHHHHHHHH
T ss_pred c-cCcEEEEECCcEEEec-CccCHHHHHHHHHHhcccchhhhcChhhhhhhhhcc--cceeEEEEeCCCCcHHHHHHHHH
Confidence 7 9999999999999887 999999999999999987754554555666666532 35678888988888888887776
Q ss_pred h-hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1008 F-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1008 ~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
+ .+...+.|+-+ .++.++++.+++ .-.+-.|....+.|...- ....+...+.+||..|+-|++-+|+..++
T Consensus 188 Ae~F~p~IkFfAt-----fd~~vAk~L~lK--~nev~fyepF~~~pi~ip-~~p~~e~e~~~fi~~h~rptlrkl~~~~m 259 (383)
T PF01216_consen 188 AEHFQPYIKFFAT-----FDKKVAKKLGLK--LNEVDFYEPFMDEPITIP-GKPYTEEELVEFIEEHKRPTLRKLRPEDM 259 (383)
T ss_dssp HHHCTTTSEEEEE------SHHHHHHHT-S--TT-EEEE-TTSSSEEEES-SSS--HHHHHHHHHHT-S-SEEE--GGGH
T ss_pred HHhhcCceeEEEE-----ecchhhhhcCcc--ccceeeeccccCCCccCC-CCCCCHHHHHHHHHHhchhHhhhCChhhh
Confidence 6 68899999888 789999999996 346777766666665532 23345567999999999999999999999
Q ss_pred hhhcCC-CCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcch----HHHHhccCCCCCCccccce
Q psy12972 1087 LDAVCP-VKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQP----EFVNALTSPEDSSEISLHI 1159 (1578)
Q Consensus 1087 ~~~~c~-~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~----~~~~~f~~~~~~~~~~~~l 1159 (1578)
++.-.. .....+++|+. ++++.-+..+.|+++|+. ++.+ .+.++|||-+..+ -|.+.|.. ++ .-
T Consensus 260 ~e~Wedd~~g~hIvaFaee~dpdG~efleilk~va~~--nt~np~LsivwIDPD~fPllv~yWE~tF~I-----dl--~~ 330 (383)
T PF01216_consen 260 FETWEDDIDGIHIVAFAEEEDPDGFEFLEILKQVARD--NTDNPDLSIVWIDPDDFPLLVPYWEKTFGI-----DL--SR 330 (383)
T ss_dssp HHHHHSSSSSEEEEEE--TTSHHHHHHHHHHHHHHHH--CTT-TT--EEEE-GGG-HHHHHHHHHHHTT------T--TS
T ss_pred hhhhcccCCCceEEEEecCCCCchHHHHHHHHHHHHh--cCcCCceeEEEECCCCCchhHHHHHhhcCc-----cc--cC
Confidence 887632 33667777764 456667889999999999 6654 5999999998776 45566621 22 22
Q ss_pred eEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1160 AAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1160 p~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
|.+=+.|.+...=.|++-+ ...-.-|.+.|+..++.+++|+..
T Consensus 331 PqIGvVnvtdadsvW~dm~----d~~d~pt~~~LedWieDVlsg~i~ 373 (383)
T PF01216_consen 331 PQIGVVNVTDADSVWMDMD----DDDDLPTAEELEDWIEDVLSGKIN 373 (383)
T ss_dssp -EEEEEETTTSEEEEC-ST----TTSS---HHHHHHHHHHHHCTCCT
T ss_pred CceeEEeccccccchhccC----CcccCCcHHHHHHHHHHHhcCCCC
Confidence 4444445554444454432 111123778899999999999886
No 23
>PTZ00102 disulphide isomerase; Provisional
Probab=99.73 E-value=3.1e-16 Score=197.49 Aligned_cols=396 Identities=12% Similarity=0.077 Sum_probs=233.6
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cce--eeeeecc-cCccccccCCccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGF--FTVHYDL-FGTTDGFSGQDSA 821 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~--v~~~~~~-~~~~~~i~g~~~~ 821 (1578)
...++..+|+..+. .++.+||.||||||+||++++|+|+++|+.+++.. +.+ ++|..+. +|+..++.+
T Consensus 34 v~~l~~~~f~~~i~---~~~~~lv~f~a~wC~~Ck~~~p~~~~~a~~~~~~~~~i~~~~vd~~~~~~l~~~~~i~~---- 106 (477)
T PTZ00102 34 VTVLTDSTFDKFIT---ENEIVLVKFYAPWCGHCKRLAPEYKKAAKMLKEKKSEIVLASVDATEEMELAQEFGVRG---- 106 (477)
T ss_pred cEEcchhhHHHHHh---cCCcEEEEEECCCCHHHHHhhHHHHHHHHHHHhcCCcEEEEEEECCCCHHHHHhcCCCc----
Confidence 34566667877662 45789999999999999999999999999997542 333 3332211 444444444
Q ss_pred cccccccccCccccccccccccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCccccc
Q psy12972 822 SRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQ 890 (1578)
Q Consensus 822 ~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~ 890 (1578)
+||+.+|..+....+.+ ..+..+ .+..++...-.... .+...+.++.++. .....
T Consensus 107 ---------~Pt~~~~~~g~~~~y~g~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~---~~~~~ 172 (477)
T PTZ00102 107 ---------YPTIKFFNKGNPVNYSGGRTADGIVSWIKKLTGPAVTEVESASEIKLI--AKKIFVAFYGEYT---SKDSE 172 (477)
T ss_pred ---------ccEEEEEECCceEEecCCCCHHHHHHHHHHhhCCCceeecCHHHHHHh--hccCcEEEEEEec---cCCcH
Confidence 48888888664323333 222221 11233322211111 1223344444443 33456
Q ss_pred ccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC-ccccccCCCCCHHHHHHHHHhhCCCccccc
Q psy12972 891 VEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG-RTSFFKEPSFSVQKMVEFFRLKLPYKLIVP 969 (1578)
Q Consensus 891 l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G-~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~ 969 (1578)
....|.++|..+++. ..|+.+. +. . .|.+.+++.. ....++.| .+.++|.+||....-| .+..
T Consensus 173 ~~~~f~~~a~~~~~~-~~F~~~~-----------~~-~-~~~~~~~~~~~~~~~~~~~-~~~~~l~~fI~~~~~P-~~~~ 236 (477)
T PTZ00102 173 LYKKFEEVADKHREH-AKFFVKK-----------HE-G-KNKIYVLHKDEEGVELFMG-KTKEELEEFVSTESFP-LFAE 236 (477)
T ss_pred HHHHHHHHHHhcccc-ceEEEEc-----------CC-C-CCcEEEEecCCCCcccCCC-CCHHHHHHHHHHcCCC-ceee
Confidence 677889999998765 5665432 11 2 4667777553 34444434 5889999999876543 4777
Q ss_pred cccccHHHHhhcccCCCcEEEEEeccCCc--hHH-HHHHHHhhcCCCeEEEEEEcccCCCh-hHHhhcCCCCCCcEEEEe
Q psy12972 970 LSATNVDAFLDNWREDNKVHALLFQRSLP--VRL-RYLINAFKHRTTIVFGVIVYDQEDSS-SVFQRFKVPGDKDSLLIF 1045 (1578)
Q Consensus 970 it~~~~~~fl~~~~~~~~~~VlfF~~~~~--~~~-~~~~~a~~~~~~v~Fg~v~~~~~~~~-~l~~kf~V~~~~Ptllvf 1045 (1578)
++.+++..+..+ +.+++.++..... ... .+...|.++++++.|++++.+ ... .+.+.+++.. .|++++.
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~f~~vd~~--~~~~~~~~~~gi~~-~P~~~i~ 309 (477)
T PTZ00102 237 INAENYRRYISS----GKDLVWFCGTTEDYDKYKSVVRKVARKLREKYAFVWLDTE--QFGSHAKEHLLIEE-FPGLAYQ 309 (477)
T ss_pred cCccchHHHhcC----CccEEEEecCHHHHHHHHHHHHHHHHhccCceEEEEEech--hcchhHHHhcCccc-CceEEEE
Confidence 888888887765 3445544432221 112 222345578888999888554 333 3788999987 5787766
Q ss_pred ccCCCCCccccccCCCCchhhhhhhhcCC------------CC-----CCcccCchhhhhhcCCCCceEEEEE-ecCCcc
Q psy12972 1046 KEDKDRPSASITMNSIPVPTLQDITDNNP------------YL-----TLPRISSQSMLDAVCPVKKLCVVLF-SEDSPE 1107 (1578)
Q Consensus 1046 k~~~~~~~~~l~~~~l~~~~L~~fI~~nk------------~p-----~vpeLts~~~~~~~c~~~~lcVll~-~~~~~~ 1107 (1578)
..........-....++...|..|++.-. .| .+..++..++.+.+-..++.++|.+ .+-...
T Consensus 310 ~~~~~y~~~~~~~~~~~~~~l~~Fv~~~~~gk~~~~~~se~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~f~a~wC~~ 389 (477)
T PTZ00102 310 SPAGRYLLPPAKESFDSVEALIEFFKDVEAGKVEKSIKSEPIPEEQDGPVKVVVGNTFEEIVFKSDKDVLLEIYAPWCGH 389 (477)
T ss_pred cCCcccCCCccccccCCHHHHHHHHHHHhCCCCCcccccCCCCCCCCCCeEEecccchHHHHhcCCCCEEEEEECCCCHH
Confidence 42211110000011235567777766321 11 1333555555555333445555555 455566
Q ss_pred hHHHHHHHHHHHhhccCCC-CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEeeccCCcccccccc
Q psy12972 1108 HDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDY 1186 (1578)
Q Consensus 1108 ~~~~~~~lr~vA~~~~~~~-~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~ 1186 (1578)
+......+.++|+. +++ ..+.|+++|.+.....+..+ +. ..+|.++..+..+..-..+.|.
T Consensus 390 C~~~~p~~~~~a~~--~~~~~~v~~~~id~~~~~~~~~~~-------~v-~~~Pt~~~~~~~~~~~~~~~G~-------- 451 (477)
T PTZ00102 390 CKNLEPVYNELGEK--YKDNDSIIVAKMNGTANETPLEEF-------SW-SAFPTILFVKAGERTPIPYEGE-------- 451 (477)
T ss_pred HHHHHHHHHHHHHH--hccCCcEEEEEEECCCCccchhcC-------CC-cccCeEEEEECCCcceeEecCc--------
Confidence 77788899999988 654 35899999998766665555 22 4788887777554321123443
Q ss_pred cccHHHHHHHhhhhhcCCc
Q psy12972 1187 NTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1187 ~~t~e~l~~fL~~ll~g~~ 1205 (1578)
.+.+.+..+|+.......
T Consensus 452 -~~~~~l~~~i~~~~~~~~ 469 (477)
T PTZ00102 452 -RTVEGFKEFVNKHATNPF 469 (477)
T ss_pred -CCHHHHHHHHHHcCCCCc
Confidence 467889999998876543
No 24
>KOG4277|consensus
Probab=99.70 E-value=3.6e-17 Score=179.05 Aligned_cols=284 Identities=14% Similarity=0.192 Sum_probs=154.4
Q ss_pred cccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccCcccccc
Q psy12972 758 NYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVF 837 (1578)
Q Consensus 758 ~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf 837 (1578)
.......++.|||+||||||+|||+|.|.|.++..+|++.+..+-..+.+ |++-...+ +..++.+|||+++|
T Consensus 36 kFkdnkdddiW~VdFYAPWC~HCKkLePiWdeVG~elkdig~PikVGKlD------aT~f~aiA--nefgiqGYPTIk~~ 107 (468)
T KOG4277|consen 36 KFKDNKDDDIWFVDFYAPWCAHCKKLEPIWDEVGHELKDIGLPIKVGKLD------ATRFPAIA--NEFGIQGYPTIKFF 107 (468)
T ss_pred HhhhcccCCeEEEEeechhhhhcccccchhHHhCcchhhcCCceeecccc------cccchhhH--hhhccCCCceEEEe
Confidence 33344578899999999999999999999999999999887655333333 32211111 11344555999999
Q ss_pred ccccc----cCccCcccceeEE------E-eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc
Q psy12972 838 SEGFN----FPFEEHDISLFHK------L-STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG 906 (1578)
Q Consensus 838 ~~~~~----~~~~~~~i~~~~v------i-~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~ 906 (1578)
+.+.. ++++.+++..|.. + .++.++....-+ ...++|.+|+|-... + .+...|.++|.+.
T Consensus 108 kgd~a~dYRG~R~Kd~iieFAhR~a~aiI~pi~enQ~~fehl-q~Rhq~ffVf~Gtge-~---PL~d~fidAASe~---- 178 (468)
T KOG4277|consen 108 KGDHAIDYRGGREKDAIIEFAHRCAAAIIEPINENQIEFEHL-QARHQPFFVFFGTGE-G---PLFDAFIDAASEK---- 178 (468)
T ss_pred cCCeeeecCCCccHHHHHHHHHhcccceeeecChhHHHHHHH-hhccCceEEEEeCCC-C---cHHHHHHHHhhhh----
Confidence 97644 4444444444421 2 333333222111 245789999887543 1 2233455555443
Q ss_pred eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHH-hhCCCccccccccccHHHHhhcccCC
Q psy12972 907 VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFR-LKLPYKLIVPLSATNVDAFLDNWRED 985 (1578)
Q Consensus 907 v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~-~~lp~~vv~~it~~~~~~fl~~~~~~ 985 (1578)
+.++..-...+.-....-..+. .|.+.+|++.....+.+| +.++|.+|+. ...|. ....+.-.+.++-.+
T Consensus 179 ~~~a~FfSaseeVaPe~~~~ke-mpaV~VFKDetf~i~de~--dd~dLseWinRERf~~--fLa~dgflL~EiG~s---- 249 (468)
T KOG4277|consen 179 FSVARFFSASEEVAPEENDAKE-MPAVAVFKDETFEIEDEG--DDEDLSEWINRERFPG--FLAADGFLLAEIGAS---- 249 (468)
T ss_pred eeeeeeeccccccCCcccchhh-ccceEEEccceeEEEecC--chhHHHHHHhHhhccc--hhhcccchHHHhCcC----
Confidence 5666654433322223334454 799999999866666555 5679999995 45554 222222333333333
Q ss_pred CcEEEEEe-ccC----C-chHHHHHHHH---h-------hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCC
Q psy12972 986 NKVHALLF-QRS----L-PVRLRYLINA---F-------KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049 (1578)
Q Consensus 986 ~~~~VlfF-~~~----~-~~~~~~~~~a---~-------~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~ 1049 (1578)
.+.+++.. +++ . .+..++...+ + .+..+..|++.+.+.-.+.-++. .+ ..|++++|+...
T Consensus 250 GKLVaLaVidEkhk~nns~eh~~~~ki~eEaakd~Rd~pdfh~dFQF~hlDGnD~~nqilM~--al--s~P~l~i~Ntsn 325 (468)
T KOG4277|consen 250 GKLVALAVIDEKHKFNNSSEHREFHKIAEEAAKDLRDHPDFHNDFQFAHLDGNDLANQILMA--AL--SEPHLFIFNTSN 325 (468)
T ss_pred CceEEEEEeccccccCCcchhHHHHHHHHHHHHHHHhChhhhhhceeeccchhHHHHHHHHH--hh--cCCeEEEEecCc
Confidence 44444444 222 2 2222222211 1 23456888888433322332222 23 248999996543
Q ss_pred CCCccccccCC---CCchhhhhhhhcC
Q psy12972 1050 DRPSASITMNS---IPVPTLQDITDNN 1073 (1578)
Q Consensus 1050 ~~~~~~l~~~~---l~~~~L~~fI~~n 1073 (1578)
.. .+++..+ .+...|..||++.
T Consensus 326 qe--YfLse~d~qikniedilqFient 350 (468)
T KOG4277|consen 326 QE--YFLSEDDPQIKNIEDILQFIENT 350 (468)
T ss_pred hh--eeeccCChhhhhHHHHHHHHhcc
Confidence 22 2333222 2233455666554
No 25
>cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44.
Probab=99.70 E-value=2.7e-17 Score=165.43 Aligned_cols=102 Identities=17% Similarity=0.214 Sum_probs=91.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhH-hHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA-RRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~-~k~gV~~~~PTl 933 (1578)
+++++++||++.+.-.+.+++++|.||||||++|+.+.|.|+++|+.+++. +.|++|||+++.++| ++|+|.+ +|||
T Consensus 11 v~~l~~~~f~~~~~v~~~~~~vlV~FyA~WC~~Ck~l~p~~~~la~~~~~~-v~~~~Vd~d~~~~l~~~~~~I~~-~PTl 88 (113)
T cd03006 11 VLDFYKGQLDYAEELRTDAEVSLVMYYAPWDAQSQAARQEFEQVAQKLSDQ-VLFVAINCWWPQGKCRKQKHFFY-FPVI 88 (113)
T ss_pred eEEechhhhHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCCChHHHHHhcCCcc-cCEE
Confidence 678999999986332356899999999999999999999999999999876 999999999999999 5899998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
++|++|+....+.|.++++.|+.|+
T Consensus 89 ~lf~~g~~~~~y~G~~~~~~i~~~~ 113 (113)
T cd03006 89 HLYYRSRGPIEYKGPMRAPYMEKFV 113 (113)
T ss_pred EEEECCccceEEeCCCCHHHHHhhC
Confidence 9999998766677999999999874
No 26
>TIGR01130 ER_PDI_fam protein disulfide isomerases, eukaryotic. Members of this family have at least two protein-disulfide domains, each similar to thioredoxin but with the redox-active disulfide in the motif PWCGHCK, and an ER retention signal at the extreme C-terminus (KDEL, HDEL, and similar motifs).
Probab=99.68 E-value=3.2e-15 Score=187.26 Aligned_cols=402 Identities=15% Similarity=0.157 Sum_probs=242.4
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
+.++..||+..+. .+++++|.||||||+||+++.|.|.++|+.+++.+ +.++.++++. +|+..++.+
T Consensus 4 ~~l~~~~~~~~i~---~~~~~~v~f~a~wC~~c~~~~~~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~i~~----- 75 (462)
T TIGR01130 4 LVLTKDNFDDFIK---SHEFVLVEFYAPWCGHCKSLAPEYEKAADELKKKGPPIKLAKVDATEEKDLAQKYGVSG----- 75 (462)
T ss_pred eECCHHHHHHHHh---cCCCEEEEEECCCCHHHHhhhHHHHHHHHHHhhcCCceEEEEEECCCcHHHHHhCCCcc-----
Confidence 4566778887773 46789999999999999999999999999998653 4443333222 444444444
Q ss_pred ccccccccCccccccccccc--cCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCCCccc
Q psy12972 823 RNFHNHMYNPFDDVFSEGFN--FPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFAC 888 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~~--~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~FyapwCg~C 888 (1578)
+||+.+|..|-. ..+.+ ..+..+ .+..++ .++++..+ +.+.+.+|.|+..- -
T Consensus 76 --------~Pt~~~~~~g~~~~~~~~g~~~~~~l~~~i~~~~~~~~~~i~~~~~~~~~~---~~~~~~vi~~~~~~---~ 141 (462)
T TIGR01130 76 --------YPTLKIFRNGEDSVSDYNGPRDADGIVKYMKKQSGPAVKEIETVADLEAFL---ADDDVVVIGFFKDL---D 141 (462)
T ss_pred --------ccEEEEEeCCccceeEecCCCCHHHHHHHHHHhcCCCceeecCHHHHHHHH---hcCCcEEEEEECCC---C
Confidence 488888886543 33333 111111 112343 45555544 33677788787552 1
Q ss_pred ccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc---cccccCCCC--CHHHHHHHHHhhCC
Q psy12972 889 LQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR---TSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 889 k~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~---~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
......|.++|..+... ..+ +-+..+..+++++++.. |++.+|+... ....+.|.. +.++|.+|+....-
T Consensus 142 ~~~~~~~~~~a~~~~~~-~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~fi~~~~~ 216 (462)
T TIGR01130 142 SELNDTFLSVAEKLRDV-YFF--FAHSSDVAAFAKLGAFP--DSVVLFKPKDEDEKFSKVDGEMDTDVSDLEKFIRAESL 216 (462)
T ss_pred cHHHHHHHHHHHHhhhc-cce--EEecCCHHHHhhcCCCC--CcEEEecccccccccccccCcccCCHHHHHHHHHHcCC
Confidence 35667899999988765 332 22334557788888754 7777774322 212334544 56899999987653
Q ss_pred CccccccccccHHHHhhcccCCCcEEEEEeccCCch---H-H-HHHHHHhhcCC-CeEEEEEEcccCCChhHHhhcCCCC
Q psy12972 964 YKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPV---R-L-RYLINAFKHRT-TIVFGVIVYDQEDSSSVFQRFKVPG 1037 (1578)
Q Consensus 964 ~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~---~-~-~~~~~a~~~~~-~v~Fg~v~~~~~~~~~l~~kf~V~~ 1037 (1578)
| .+..++.+++..+.++. ...+++++.+.... . . .+...|.++++ .+.|++++ ......+++.+++..
T Consensus 217 p-~v~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~f~~~d--~~~~~~~~~~~~~~~ 290 (462)
T TIGR01130 217 P-LVGEFTQETAAKYFESG---PLVVLYYNVDESLDPFEELRNRFLEAAKKFRGKFVNFAVAD--EEDFGRELEYFGLKA 290 (462)
T ss_pred C-ceEeeCCcchhhHhCCC---CceeEEEEecCCchHHHHHHHHHHHHHHHCCCCeEEEEEec--HHHhHHHHHHcCCCc
Confidence 3 47777888888877653 33333333332321 1 1 22223446664 78888874 335677899999983
Q ss_pred -CCcEEEEeccCCCCCcccccc-CCCCchhhhhhhhcCCC-----------------CCCcccCchhhhhhcCCCCceEE
Q psy12972 1038 -DKDSLLIFKEDKDRPSASITM-NSIPVPTLQDITDNNPY-----------------LTLPRISSQSMLDAVCPVKKLCV 1098 (1578)
Q Consensus 1038 -~~Ptllvfk~~~~~~~~~l~~-~~l~~~~L~~fI~~nk~-----------------p~vpeLts~~~~~~~c~~~~lcV 1098 (1578)
..|++++++.+. ...+... +.++...|.+|++.-.- ..+..++..++.+.+-..++..+
T Consensus 291 ~~~P~~vi~~~~~--~~~y~~~~~~~~~~~i~~fi~~~~~g~~~~~~~se~~p~~~~~~v~~l~~~~f~~~v~~~~~~vl 368 (462)
T TIGR01130 291 EKFPAVAIQDLEG--NKKYPMDQEEFSSENLEAFVKDFLDGKLKPYLKSEPIPEDDEGPVKVLVGKNFDEIVLDETKDVL 368 (462)
T ss_pred cCCceEEEEeCCc--ccccCCCcCCCCHHHHHHHHHHHhcCCCCeeeccCCCCccCCCccEEeeCcCHHHHhccCCCeEE
Confidence 478999985443 1112212 24566678888775311 12334555555554433345555
Q ss_pred EEE-ecCCcchHHHHHHHHHHHhhccCCC-C-cEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcc-eEee
Q psy12972 1099 VLF-SEDSPEHDASRHTLRRFAQESRFVH-N-NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKI-KYGW 1174 (1578)
Q Consensus 1099 ll~-~~~~~~~~~~~~~lr~vA~~~~~~~-~-~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~-kY~~ 1174 (1578)
|.+ .+....+......+.++|+. +.+ + .+.|+.+|.+.. +... + .. ..+|.+......+. .-..
T Consensus 369 v~f~a~wC~~C~~~~p~~~~~~~~--~~~~~~~i~~~~id~~~n-~~~~-~-------~i-~~~Pt~~~~~~~~~~~~~~ 436 (462)
T TIGR01130 369 VEFYAPWCGHCKNLAPIYEELAEK--YKDAESDVVIAKMDATAN-DVPP-F-------EV-EGFPTIKFVPAGKKSEPVP 436 (462)
T ss_pred EEEECCCCHhHHHHHHHHHHHHHH--hhcCCCcEEEEEEECCCC-ccCC-C-------Cc-cccCEEEEEeCCCCcCceE
Confidence 555 45556677788899999999 666 2 599999998653 2222 2 11 56787777764432 1111
Q ss_pred ccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1175 LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1175 l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
..| ..+.+.|..+|++..+.+.
T Consensus 437 ~~g---------~~~~~~l~~~l~~~~~~~~ 458 (462)
T TIGR01130 437 YDG---------DRTLEDFSKFIAKHATFPL 458 (462)
T ss_pred ecC---------cCCHHHHHHHHHhcCCCCC
Confidence 232 2467788888887765543
No 27
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.65 E-value=7.1e-16 Score=170.28 Aligned_cols=157 Identities=22% Similarity=0.193 Sum_probs=104.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
..||+||+|+||+|+..+|++||||+++++.......| ..+....++ ...+...+...++.++. ..|++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~E~~ 71 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRF-RHGYCKSNPRKMVRTWA---------EKEMR 71 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchh-hccccCCCHHHHHHHHH---------HHHHH
Confidence 57999999999999988999999999999754322212 111101111 01122334444443332 57999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH-HHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI-FQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i-~~~G~vH~D 565 (1578)
|+.++.. +.+.+|.++ .+...+|||||++|..+.... +...+++.+.+...+.++. +.++ |..|++|+|
T Consensus 72 ~l~~l~~-----~~v~~p~~~--~~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrD 143 (190)
T cd05147 72 NLKRLVT-----AGIPCPEPI--LLKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCRLVHAD 143 (190)
T ss_pred HHHHHHH-----CCCCCCcEE--EecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 9999964 245567666 345669999999997654331 3345677776666665533 6677 699999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
|||+|||+. .+++||||..
T Consensus 144 lkP~NIli~~~~v~LiDFG~a 164 (190)
T cd05147 144 LSEYNLLYHDGKLYIIDVSQS 164 (190)
T ss_pred CCHHHEEEECCcEEEEEcccc
Confidence 999999974 5788888854
No 28
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=99.65 E-value=2.2e-16 Score=155.99 Aligned_cols=99 Identities=19% Similarity=0.347 Sum_probs=90.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ..+++++|.||+|||++|+.+.|.|+++|+.+++. +.|++|||++++.+|++++|++ +||++
T Consensus 3 ~~~l~~~~f~~~v---~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 77 (101)
T cd03003 3 IVTLDRGDFDAAV---NSGEIWFVNFYSPRCSHCHDLAPTWREFAKEMDGV-IRIGAVNCGDDRMLCRSQGVNS-YPSLY 77 (101)
T ss_pred eEEcCHhhHHHHh---cCCCeEEEEEECCCChHHHHhHHHHHHHHHHhcCc-eEEEEEeCCccHHHHHHcCCCc-cCEEE
Confidence 4578999999977 33589999999999999999999999999999876 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHH
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+|++|+....+.|.++.++|.+|+
T Consensus 78 ~~~~g~~~~~~~G~~~~~~l~~f~ 101 (101)
T cd03003 78 VFPSGMNPEKYYGDRSKESLVKFA 101 (101)
T ss_pred EEcCCCCcccCCCCCCHHHHHhhC
Confidence 999998877788999999999874
No 29
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.64 E-value=7.3e-16 Score=170.25 Aligned_cols=157 Identities=21% Similarity=0.188 Sum_probs=99.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.|||+||+||||+|+..+|+.||||+.+|+.... ..+...+....++... ....+...++.+ .+..|++
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~E~~ 71 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR-YSKSNPRKLVFA---------WAEKEFR 71 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc-cccCCHHHHHHH---------HHHHHHH
Confidence 5899999999999998899999999999985421 1111111100000000 000122222222 2468999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~D 565 (1578)
|+.++.. +.+.+|.++. +...+|||||++|..+... .+....++..++...+.++. +..+|. .|++|+|
T Consensus 72 ~l~~l~~-----~~i~~p~~~~--~~~~~lVmE~~~g~~~~~~-~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrD 143 (190)
T cd05145 72 NLKRLYE-----AGVPVPEPIL--LKKNVLVMEFIGDDGSPAP-RLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGD 143 (190)
T ss_pred HHHHHHh-----CCCCCceEEE--ecCCEEEEEEecCCCchhh-hhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 9999874 4577888875 3467999999999854332 13344555544444333333 566777 9999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
|||+|||+. .++++|||..
T Consensus 144 lkP~NIll~~~~~~liDFG~a 164 (190)
T cd05145 144 LSEYNILYHDGKPYIIDVSQA 164 (190)
T ss_pred CChhhEEEECCCEEEEEcccc
Confidence 999999963 4667777754
No 30
>KOG0712|consensus
Probab=99.62 E-value=6.9e-16 Score=178.08 Aligned_cols=69 Identities=45% Similarity=0.802 Sum_probs=65.1
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
...+|++|||+++||.+|||+|||+|+++||||||++ +.++|++|++||++||||++|..||++|..+.
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~ 71 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGL 71 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhh
Confidence 4578999999999999999999999999999999966 89999999999999999999999999998754
No 31
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.61 E-value=4.7e-17 Score=165.43 Aligned_cols=68 Identities=21% Similarity=0.247 Sum_probs=64.9
Q ss_pred HHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEeCCCchhhHHhhHHHHHhhccCCCccCccC
Q psy12972 147 EDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLHEFHEATNERPDHEFHEATNERPDHEFHEA 214 (1578)
Q Consensus 147 ~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~~p~v~~~i~~Dl~~~~~~~~~~~~~~~~~ 214 (1578)
++||++++++|++||++|||||||||||+ +|++||||||||||++.|..||++|+.+...++..+...
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~ 72 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR 72 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 57999999999999999999999999999 899999999999999999999999999999998887765
No 32
>cd03007 PDI_a_ERp29_N PDIa family, endoplasmic reticulum protein 29 (ERp29) subfamily; ERp29 is a ubiquitous ER-resident protein expressed in high levels in secretory cells. It forms homodimers and higher oligomers in vitro and in vivo. It contains a redox inactive TRX-like domain at the N-terminus, which is homologous to the redox active TRX (a) domains of PDI, and a C-terminal helical domain similar to the C-terminal domain of P5. The expression profile of ERp29 suggests a role in secretory protein production distinct from that of PDI. It has also been identified as a member of the thyroglobulin folding complex. The Drosophila homolog, Wind, is the product of windbeutel, an essential gene in the development of dorsal-ventral patterning. Wind is required for correct targeting of Pipe, a Golgi-resident type II transmembrane protein with homology to 2-O-sulfotransferase.
Probab=99.61 E-value=7.5e-16 Score=154.18 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=84.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc--CCCc---ccccccHHHHHHHHHhCCCceEEEEEEC-----ccchhhHhHc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS--DWCF---ACLQVEPIFKKLMDELSPLGVGFFTVHV-----HNEQGLARRL 924 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya--pwCg---~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----~~~~~L~~k~ 924 (1578)
+++||.+||++.| +.++.+||+||| |||+ ||++++|+|.+++.. |.+|+||| +++.+||++|
T Consensus 3 ~v~L~~~nF~~~v---~~~~~vlV~F~A~~Pwc~k~~~~~~LA~e~~~aa~~-----v~lakVd~~d~~~~~~~~L~~~y 74 (116)
T cd03007 3 CVDLDTVTFYKVI---PKFKYSLVKFDTAYPYGEKHEAFTRLAESSASATDD-----LLVAEVGIKDYGEKLNMELGERY 74 (116)
T ss_pred eeECChhhHHHHH---hcCCcEEEEEeCCCCCCCChHHHHHHHHHHHhhcCc-----eEEEEEecccccchhhHHHHHHh
Confidence 4679999999987 557899999999 9999 888888888887754 78999999 5788999999
Q ss_pred Ccc--ccCCcEEEEcCCc--cccccCCC-CCHHHHHHHHHhh
Q psy12972 925 GVG--SQLPQIALLTDGR--TSFFKEPS-FSVQKMVEFFRLK 961 (1578)
Q Consensus 925 gV~--~~~PTl~lf~~G~--~~~y~~G~-~s~~~L~~fi~~~ 961 (1578)
+|+ + ||||++|++|. ....|.|. |++++|++||.++
T Consensus 75 ~I~~~g-yPTl~lF~~g~~~~~~~Y~G~~r~~~~lv~~v~~~ 115 (116)
T cd03007 75 KLDKES-YPVIYLFHGGDFENPVPYSGADVTVDALQRFLKGN 115 (116)
T ss_pred CCCcCC-CCEEEEEeCCCcCCCccCCCCcccHHHHHHHHHhc
Confidence 999 8 99999999985 33445686 9999999999875
No 33
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=99.61 E-value=1.3e-15 Score=150.19 Aligned_cols=102 Identities=27% Similarity=0.525 Sum_probs=94.8
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+.+ ++++++|.||++||++|+.+.|.|+++++.+.+ ++.++.|||++++.+|++|+|++ +||+++
T Consensus 2 ~~lt~~~f~~~i~~--~~~~vvv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~ 77 (103)
T PF00085_consen 2 IVLTDENFEKFINE--SDKPVVVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDENKELCKKYGVKS-VPTIIF 77 (103)
T ss_dssp EEESTTTHHHHHTT--TSSEEEEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTSHHHHHHTTCSS-SSEEEE
T ss_pred EECCHHHHHHHHHc--cCCCEEEEEeCCCCCccccccceeccccccccc-ccccchhhhhccchhhhccCCCC-CCEEEE
Confidence 46899999999854 379999999999999999999999999999987 59999999999999999999997 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.|.++.++|.+||+++
T Consensus 78 ~~~g~~~~~~~g~~~~~~l~~~i~~~ 103 (103)
T PF00085_consen 78 FKNGKEVKRYNGPRNAESLIEFIEKH 103 (103)
T ss_dssp EETTEEEEEEESSSSHHHHHHHHHHH
T ss_pred EECCcEEEEEECCCCHHHHHHHHHcC
Confidence 99999887888999999999999874
No 34
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.60 E-value=6.9e-16 Score=186.21 Aligned_cols=69 Identities=48% Similarity=0.835 Sum_probs=66.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|||++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+||++|+.||++|..
T Consensus 3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~ 71 (372)
T PRK14296 3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHA 71 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccch
Confidence 479999999999999999999999999999999998888999999999999999999999999999875
No 35
>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.
Probab=99.60 E-value=1.2e-15 Score=151.52 Aligned_cols=100 Identities=20% Similarity=0.366 Sum_probs=89.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+... +++++|.|||+||++|+.+.|.|+++++.+.+. +.+++|||++++++|++++|.+ +||++
T Consensus 3 v~~l~~~~f~~~i~~~--~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~i~~-~Pt~~ 78 (104)
T cd03004 3 VITLTPEDFPELVLNR--KEPWLVDFYAPWCGPCQALLPELRKAARALKGK-VKVGSVDCQKYESLCQQANIRA-YPTIR 78 (104)
T ss_pred ceEcCHHHHHHHHhcC--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCchHHHHHHcCCCc-ccEEE
Confidence 4578999999987644 669999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCC-ccccccCCCCC-HHHHHHHH
Q psy12972 935 LLTDG-RTSFFKEPSFS-VQKMVEFF 958 (1578)
Q Consensus 935 lf~~G-~~~~y~~G~~s-~~~L~~fi 958 (1578)
+|++| +....+.|..+ .++|.+|+
T Consensus 79 ~~~~g~~~~~~~~G~~~~~~~l~~~i 104 (104)
T cd03004 79 LYPGNASKYHSYNGWHRDADSILEFI 104 (104)
T ss_pred EEcCCCCCceEccCCCCCHHHHHhhC
Confidence 99988 76666778887 99999885
No 36
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=99.59 E-value=1.7e-15 Score=151.58 Aligned_cols=100 Identities=24% Similarity=0.371 Sum_probs=88.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-----ceEEEEEECccchhhHhHcCcccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GVGFFTVHVHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-----~v~~a~VDc~~~~~L~~k~gV~~~ 929 (1578)
+++++.++|++.+ +.+++++|.||||||++|+++.|.|+++|+.+++. .+.+++|||+++.++|++|+|++
T Consensus 3 v~~l~~~~f~~~i---~~~~~vlv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~v~~- 78 (108)
T cd02996 3 IVSLTSGNIDDIL---QSAELVLVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKESDIADRYRINK- 78 (108)
T ss_pred eEEcCHhhHHHHH---hcCCEEEEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCHHHHHhCCCCc-
Confidence 5678999999876 34679999999999999999999999999987421 38999999999999999999998
Q ss_pred CCcEEEEcCCc-cccccCCCCCHHHHHHHH
Q psy12972 930 LPQIALLTDGR-TSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 930 ~PTl~lf~~G~-~~~y~~G~~s~~~L~~fi 958 (1578)
+||+++|++|+ ....+.|.++.++|++||
T Consensus 79 ~Ptl~~~~~g~~~~~~~~g~~~~~~l~~fi 108 (108)
T cd02996 79 YPTLKLFRNGMMMKREYRGQRSVEALAEFV 108 (108)
T ss_pred CCEEEEEeCCcCcceecCCCCCHHHHHhhC
Confidence 99999999998 445666999999999985
No 37
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1e-15 Score=184.67 Aligned_cols=98 Identities=33% Similarity=0.678 Sum_probs=76.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||++|+.||++|..+...+. ..+
T Consensus 2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~-~~~ 80 (369)
T PRK14288 2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG-ASQ 80 (369)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC-CCc
Confidence 369999999999999999999999999999999997 577899999999999999999999999999975322111 111
Q ss_pred cccCCCCCCCcccccccCCCC
Q psy12972 715 RNFHNHMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~~~~~~f~~~F~~~Fg~ 735 (1578)
.+|. ..|.+|.++|+++||.
T Consensus 81 ~~~~-~~f~~~~~~F~~~fg~ 100 (369)
T PRK14288 81 SDFS-DFFEDLGSFFEDAFGF 100 (369)
T ss_pred cccc-cchhhHHHHHHhhcCC
Confidence 1222 1244556677766653
No 38
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=99.59 E-value=2e-15 Score=152.04 Aligned_cols=103 Identities=43% Similarity=0.868 Sum_probs=93.7
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.+|.++|.+.+...+.+++++|.||||||++|+.+.|.|+++++.+.+.++.+++|||++++.+|++++|.+ +||+++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~l~~~~~V~~-~Pt~~i~ 86 (111)
T cd02963 8 SLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHERRLARKLGAHS-VPAIVGI 86 (111)
T ss_pred eeeHHHHHHhhccccCCCeEEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccHHHHHHcCCcc-CCEEEEE
Confidence 568888988776655689999999999999999999999999999986569999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
++|+...+..|..+.+.|.+|+.+
T Consensus 87 ~~g~~~~~~~G~~~~~~l~~~i~~ 110 (111)
T cd02963 87 INGQVTFYHDSSFTKQHVVDFVRK 110 (111)
T ss_pred ECCEEEEEecCCCCHHHHHHHHhc
Confidence 999988887899999999999975
No 39
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=99.58 E-value=1.5e-15 Score=171.03 Aligned_cols=175 Identities=13% Similarity=0.182 Sum_probs=120.3
Q ss_pred Cccceecccc---ccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccccCccccccc
Q psy12972 765 TTPHLILFYS---DWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 765 ~~~~lV~FYA---pwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
++..++.|++ |||++|+.+.|.++++++.+.+..+.+++++.+. ++...++.+ .||+.+|+
T Consensus 19 ~~~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~~~~l~~~~~V~~-------------~Pt~~~f~ 85 (215)
T TIGR02187 19 NPVEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPEDKEEAEKYGVER-------------VPTTIILE 85 (215)
T ss_pred CCeEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcccHHHHHHcCCCc-------------cCEEEEEe
Confidence 4455777999 9999999999999999999865445555554322 444444444 48888887
Q ss_pred ccccc--CccC----cccceeE---------EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC
Q psy12972 839 EGFNF--PFEE----HDISLFH---------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 903 (1578)
Q Consensus 839 ~~~~~--~~~~----~~i~~~~---------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~ 903 (1578)
+|-.. .+.+ .....+. ...++..+.+. +. ...+...++.||++||++|+.+.|.+++++...
T Consensus 86 ~g~~~~~~~~G~~~~~~l~~~i~~~~~~~~~~~~L~~~~~~~-l~-~~~~pv~I~~F~a~~C~~C~~~~~~l~~l~~~~- 162 (215)
T TIGR02187 86 EGKDGGIRYTGIPAGYEFAALIEDIVRVSQGEPGLSEKTVEL-LQ-SLDEPVRIEVFVTPTCPYCPYAVLMAHKFALAN- 162 (215)
T ss_pred CCeeeEEEEeecCCHHHHHHHHHHHHHhcCCCCCCCHHHHHH-HH-hcCCCcEEEEEECCCCCCcHHHHHHHHHHHHhc-
Confidence 64331 2222 1111110 01222222221 11 112334455599999999999999999999874
Q ss_pred CCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 904 PLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 904 ~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+. +.+..+|.+.+++++++|+|.+ +||++++.+|.. +.|..+.+++.+|+.+
T Consensus 163 ~~-i~~~~vD~~~~~~~~~~~~V~~-vPtl~i~~~~~~---~~G~~~~~~l~~~l~~ 214 (215)
T TIGR02187 163 DK-ILGEMIEANENPDLAEKYGVMS-VPKIVINKGVEE---FVGAYPEEQFLEYILS 214 (215)
T ss_pred Cc-eEEEEEeCCCCHHHHHHhCCcc-CCEEEEecCCEE---EECCCCHHHHHHHHHh
Confidence 33 8899999999999999999997 999999988753 4488888999999865
No 40
>cd03065 PDI_b_Calsequestrin_N PDIb family, Calsequestrin subfamily, N-terminal TRX-fold domain; Calsequestrin is the major calcium storage protein in the sarcoplasmic reticulum (SR) of skeletal and cardiac muscle. It stores calcium ions in sufficient quantities (up to 20 mM) to allow repetitive contractions and is essential to maintain movement, respiration and heart beat. A missense mutation in human cardiac calsequestrin is associated with catecholamine-induced polymorphic ventricular tachycardia (CPVT), a rare disease characterized by seizures or sudden death in response to physiologic or emotional stress. Calsequestrin is a highly acidic protein with up to 50 calcium binding sites formed simply by the clustering of two or more acidic residues. The monomer contains three redox inactive TRX-fold domains. Calsequestrin is condensed as a linear polymer in the SR lumen and is membrane-anchored through binding with intra-membrane proteins triadin, junctin and ryanodine receptor (RyR) Ca2
Probab=99.58 E-value=2.8e-15 Score=151.87 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=90.3
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcc--cc--cccHHHHHHHHHh-CCCceEEEEEECccchhhHhHcCccc
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFA--CL--QVEPIFKKLMDEL-SPLGVGFFTVHVHNEQGLARRLGVGS 928 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~--Ck--~l~p~~~~lA~~l-~~~~v~~a~VDc~~~~~L~~k~gV~~ 928 (1578)
.++.+|++||++.|.++ +.++++.|+++||++ |+ .++|.+.++|.++ +..++.|++|||++++++|++|||.+
T Consensus 10 ~v~~lt~~nF~~~v~~~--~~~vvv~f~a~wc~p~~Ck~~~~~p~~~~~aa~~l~~~~v~~~kVD~d~~~~La~~~~I~~ 87 (120)
T cd03065 10 RVIDLNEKNYKQVLKKY--DVLCLLYHEPVESDKEAQKQFQMEELVLELAAQVLEDKGIGFGLVDSKKDAKVAKKLGLDE 87 (120)
T ss_pred ceeeCChhhHHHHHHhC--CceEEEEECCCcCChhhChhhcchhhHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHcCCcc
Confidence 35678999999998644 778899999999975 99 7788888887776 33349999999999999999999998
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|||++|++|+.+. +.|.++.+.|++|+.+.+
T Consensus 88 -iPTl~lfk~G~~v~-~~G~~~~~~l~~~l~~~~ 119 (120)
T cd03065 88 -EDSIYVFKDDEVIE-YDGEFAADTLVEFLLDLI 119 (120)
T ss_pred -ccEEEEEECCEEEE-eeCCCCHHHHHHHHHHHh
Confidence 99999999999877 679999999999998653
No 41
>KOG0910|consensus
Probab=99.58 E-value=2.1e-15 Score=154.55 Aligned_cols=103 Identities=17% Similarity=0.389 Sum_probs=96.6
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++...|++.|+++ +.|++|+|||+|||+|+.+.|..++++.++.|+ +++++||.+++.+++.+|+|+. +||+++|
T Consensus 47 ~~s~~~~~~~Vi~S--~~PVlVdF~A~WCgPCk~l~P~l~~~~~~~~g~-~k~~kvdtD~~~ela~~Y~I~a-vPtvlvf 122 (150)
T KOG0910|consen 47 VQSDSEFDDKVINS--DVPVLVDFHAEWCGPCKMLGPILEELVSEYAGK-FKLYKVDTDEHPELAEDYEISA-VPTVLVF 122 (150)
T ss_pred ccCHHHHHHHHHcc--CCCEEEEEecCcCccHhHhhHHHHHHHHhhcCe-EEEEEEccccccchHhhcceee-eeEEEEE
Confidence 57888999998765 899999999999999999999999999999987 9999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|+......|..+.+.|.+||++.++
T Consensus 123 knGe~~d~~vG~~~~~~l~~~i~k~l~ 149 (150)
T KOG0910|consen 123 KNGEKVDRFVGAVPKEQLRSLIKKFLK 149 (150)
T ss_pred ECCEEeeeecccCCHHHHHHHHHHHhc
Confidence 999999888899999999999988764
No 42
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=99.57 E-value=5.7e-15 Score=145.83 Aligned_cols=99 Identities=27% Similarity=0.427 Sum_probs=87.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ++.++|.|||+||++|+.+.|.|+++++.+++.++.+++|||++++.+|++|+|.+ +||++
T Consensus 3 v~~l~~~~f~~~~-----~~~~lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~i~~-~Pt~~ 76 (101)
T cd02994 3 VVELTDSNWTLVL-----EGEWMIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGRFFVTA-LPTIY 76 (101)
T ss_pred eEEcChhhHHHHh-----CCCEEEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHhHHHHcCCcc-cCEEE
Confidence 5678999999865 22389999999999999999999999998876569999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+|++|+. ..+.|.++.++|.+|+.+
T Consensus 77 ~~~~g~~-~~~~G~~~~~~l~~~i~~ 101 (101)
T cd02994 77 HAKDGVF-RRYQGPRDKEDLISFIEE 101 (101)
T ss_pred EeCCCCE-EEecCCCCHHHHHHHHhC
Confidence 9999985 455699999999999863
No 43
>COG3118 Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=3.6e-15 Score=167.58 Aligned_cols=108 Identities=27% Similarity=0.418 Sum_probs=104.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|+.||.+.|+..+..+|++|.||+|||++|+.+.|..++++.+++|. +.+++|||+.++.++..|||++ .||++
T Consensus 25 I~dvT~anfe~~V~~~S~~~PVlV~fWap~~~~c~qL~p~Lekla~~~~G~-f~LakvN~D~~p~vAaqfgiqs-IPtV~ 102 (304)
T COG3118 25 IKDVTEANFEQEVIQSSREVPVLVDFWAPWCGPCKQLTPTLEKLAAEYKGK-FKLAKVNCDAEPMVAAQFGVQS-IPTVY 102 (304)
T ss_pred ceechHhHHHHHHHHHccCCCeEEEecCCCCchHHHHHHHHHHHHHHhCCc-eEEEEecCCcchhHHHHhCcCc-CCeEE
Confidence 568999999999999999999999999999999999999999999999998 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.|++|+++.-+.|....+.|..|+.+.+|.
T Consensus 103 af~dGqpVdgF~G~qPesqlr~~ld~~~~~ 132 (304)
T COG3118 103 AFKDGQPVDGFQGAQPESQLRQFLDKVLPA 132 (304)
T ss_pred EeeCCcCccccCCCCcHHHHHHHHHHhcCh
Confidence 999999999999999999999999999976
No 44
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=3.5e-15 Score=180.24 Aligned_cols=95 Identities=40% Similarity=0.709 Sum_probs=76.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+... .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~--~ 80 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG--G 80 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC--C
Confidence 46999999999999999999999999999999999888899999999999999999999999999997643211100 0
Q ss_pred ccCCCCCCCcccccccCCC
Q psy12972 716 NFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg 734 (1578)
++ .+|.+|.|+|+.+||
T Consensus 81 ~~--~~f~~~~d~f~~~fg 97 (371)
T PRK14287 81 GA--GDFGGFSDIFDMFFG 97 (371)
T ss_pred CC--ccccchHHHHHhhhc
Confidence 11 123346677777766
No 45
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=3.9e-15 Score=180.00 Aligned_cols=98 Identities=41% Similarity=0.734 Sum_probs=78.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+... ..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~-~~ 82 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA-ED 82 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc-cc
Confidence 46999999999999999999999999999999999888899999999999999999999999999987532211110 01
Q ss_pred ccCCCCCCCcccccccCCC
Q psy12972 716 NFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg 734 (1578)
.|...+|.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~d~f~~~Fg 101 (377)
T PRK14298 83 IFRGADFGGFGDIFEMFFG 101 (377)
T ss_pred ccccCCcCcchhhhHhhhc
Confidence 1222234557778887776
No 46
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.2e-15 Score=180.30 Aligned_cols=99 Identities=36% Similarity=0.687 Sum_probs=78.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC---
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS--- 712 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~--- 712 (1578)
..|||++|||+++||.+|||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||++|..+...+...
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 46999999999999999999999999999999999888899999999999999999999999999997643211111
Q ss_pred CCcccCC-CCCCCcccccccCCC
Q psy12972 713 ASRNFHN-HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 713 ~~~~~~~-~~~~~f~~~F~~~Fg 734 (1578)
...++.. .+|.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fg 105 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFG 105 (380)
T ss_pred CCCCccccccccchhhHHHHHhC
Confidence 1111211 134457788887776
No 47
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.7e-15 Score=173.77 Aligned_cols=99 Identities=41% Similarity=0.730 Sum_probs=78.3
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCC---CC-
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSG---QD- 711 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~---~~- 711 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+|+.+|+.||.+|......+ ..
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 47999999999999999999999999999999999888899999999999999999999999999987632111 10
Q ss_pred --CCCcccCCCCCCCcccccccCCC
Q psy12972 712 --SASRNFHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 712 --~~~~~~~~~~~~~f~~~F~~~Fg 734 (1578)
.+..++.++.+.+|.++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fg 107 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFG 107 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhC
Confidence 00111222223456777877776
No 48
>KOG0717|consensus
Probab=99.55 E-value=1.6e-15 Score=176.37 Aligned_cols=72 Identities=40% Similarity=0.626 Sum_probs=66.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....+.+|++|||.++|+..+||++||+||++||||||++ ..++++|+.|+.||+|||||..|+.||.+...
T Consensus 4 ~~~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreq 77 (508)
T KOG0717|consen 4 PFKKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQ 77 (508)
T ss_pred chhhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHH
Confidence 3456899999999999999999999999999999999885 67899999999999999999999999988764
No 49
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.4e-15 Score=179.45 Aligned_cols=99 Identities=34% Similarity=0.710 Sum_probs=77.3
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC-C
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS-A 713 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~-~ 713 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|..+...+... .
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 469999999999999999999999999999999997 47789999999999999999999999999987642211100 1
Q ss_pred CcccCCC--CCCCcccccccCCC
Q psy12972 714 SRNFHNH--MYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~~--~~~~f~~~F~~~Fg 734 (1578)
..++.++ .|.+|+++|+.+||
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffg 105 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFG 105 (372)
T ss_pred CCCcccccccccchhhHHHHhhC
Confidence 0111111 13456778887776
No 50
>KOG0191|consensus
Probab=99.54 E-value=8.9e-14 Score=170.06 Aligned_cols=208 Identities=19% Similarity=0.326 Sum_probs=150.8
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
++..+|...+. ..+.+++|+||+|||+||+++.|+|+++++.+++. +.++.|||+.++++|++|+|.+ |||+.+|.
T Consensus 34 ~~~~~~~~~~~--~~~~~~~v~fyapwc~~c~~l~~~~~~~~~~l~~~-~~~~~vd~~~~~~~~~~y~i~g-fPtl~~f~ 109 (383)
T KOG0191|consen 34 LTLDSFFDFLL--KDDSPWLVEFYAPWCGHCKKLAPTYKKLAKALKGK-VKIGAVDCDEHKDLCEKYGIQG-FPTLKVFR 109 (383)
T ss_pred hhccccHHHhh--ccCCceEEEEECCCCcchhhhchHHHHHHHHhcCc-eEEEEeCchhhHHHHHhcCCcc-CcEEEEEc
Confidence 44555665554 44899999999999999999999999999999986 9999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCCCcc-------ccccccccHHHHhhcccCCCcEEEEEec------cCCchHHHHH
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLPYKL-------IVPLSATNVDAFLDNWREDNKVHALLFQ------RSLPVRLRYL 1004 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp~~v-------v~~it~~~~~~fl~~~~~~~~~~VlfF~------~~~~~~~~~~ 1004 (1578)
.|.....+.|.++++.+.+|+.+.+.+.+ +...+..++....... +...+|.||. +.-.+.+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~aPwc~~ck~l~~~~~~~ 187 (383)
T KOG0191|consen 110 PGKKPIDYSGPRNAESLAEFLIKELEPSVKKLVEGEVFELTKDNFDETVKDS--DADWLVEFYAPWCGHCKKLAPEWEKL 187 (383)
T ss_pred CCCceeeccCcccHHHHHHHHHHhhccccccccCCceEEccccchhhhhhcc--CcceEEEEeccccHHhhhcChHHHHH
Confidence 98444445589999999999987764332 2233455666665543 3556666663 3334555555
Q ss_pred HHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCC
Q psy12972 1005 INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYL 1076 (1578)
Q Consensus 1005 ~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p 1076 (1578)
...++....+..+.+ +++....++.+++|.. .|++.+|+.+.. +. ......-+...+..|+....-.
T Consensus 188 a~~~~~~~~v~~~~~--d~~~~~~~~~~~~v~~-~Pt~~~f~~~~~-~~-~~~~~~R~~~~i~~~v~~~~~~ 254 (383)
T KOG0191|consen 188 AKLLKSKENVELGKI--DATVHKSLASRLEVRG-YPTLKLFPPGEE-DI-YYYSGLRDSDSIVSFVEKKERR 254 (383)
T ss_pred HHHhccCcceEEEee--ccchHHHHhhhhcccC-CceEEEecCCCc-cc-ccccccccHHHHHHHHHhhcCC
Confidence 554444566777666 3446788899999987 469999976544 22 2223333556788887776544
No 51
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=99.52 E-value=1.3e-14 Score=162.51 Aligned_cols=107 Identities=22% Similarity=0.427 Sum_probs=97.0
Q ss_pred EEEeeccccccceecccC--CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKS--YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s--~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~P 931 (1578)
.++++|++||++.+.... ..++|+|.||||||++|+++.|.|+++++.+++. +.+++|||++++++|++|+|++ +|
T Consensus 31 ~Vv~Lt~~nF~~~v~~~~~~~~~~vlV~FyApWC~~Ck~~~P~~e~la~~~~~~-v~~~~VD~~~~~~l~~~~~I~~-~P 108 (224)
T PTZ00443 31 ALVLLNDKNFEKLTQASTGATTGPWFVKFYAPWCSHCRKMAPAWERLAKALKGQ-VNVADLDATRALNLAKRFAIKG-YP 108 (224)
T ss_pred CcEECCHHHHHHHHhhhcccCCCCEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEecCcccHHHHHHcCCCc-CC
Confidence 467899999999775432 3689999999999999999999999999999876 9999999999999999999998 99
Q ss_pred cEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 932 QIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 932 Tl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+++|++|+...++.|.++.++|.+|+.+..
T Consensus 109 Tl~~f~~G~~v~~~~G~~s~e~L~~fi~~~~ 139 (224)
T PTZ00443 109 TLLLFDKGKMYQYEGGDRSTEKLAAFALGDF 139 (224)
T ss_pred EEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 9999999998888889999999999998765
No 52
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=99.52 E-value=2.2e-14 Score=143.47 Aligned_cols=101 Identities=24% Similarity=0.393 Sum_probs=89.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc--chhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~--~~~L~~k~gV~~~~PT 932 (1578)
+++++.++|++.+.+. +++++|.||++||++|+++.|.|+++++.+.+. +.++.|||+. +.++|++|+|.+ +||
T Consensus 2 v~~l~~~~~~~~i~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~a~~~~~~-~~~~~v~~~~~~~~~~~~~~~i~~-~Pt 77 (109)
T cd03002 2 VYELTPKNFDKVVHNT--NYTTLVEFYAPWCGHCKNLKPEYAKAAKELDGL-VQVAAVDCDEDKNKPLCGKYGVQG-FPT 77 (109)
T ss_pred eEEcchhhHHHHHhcC--CCeEEEEEECCCCHHHHhhChHHHHHHHHhcCC-ceEEEEecCccccHHHHHHcCCCc-CCE
Confidence 4578999999988643 778999999999999999999999999999865 8999999998 889999999998 999
Q ss_pred EEEEcCCc-----cccccCCCCCHHHHHHHHH
Q psy12972 933 IALLTDGR-----TSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 933 l~lf~~G~-----~~~y~~G~~s~~~L~~fi~ 959 (1578)
+++|.+|. ....+.|.++.++|++||.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~G~~~~~~l~~fi~ 109 (109)
T cd03002 78 LKVFRPPKKASKHAVEDYNGERSAKAIVDFVL 109 (109)
T ss_pred EEEEeCCCcccccccccccCccCHHHHHHHhC
Confidence 99998885 3455679999999999983
No 53
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.2e-14 Score=176.03 Aligned_cols=95 Identities=41% Similarity=0.598 Sum_probs=76.4
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCcc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRN 716 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~~ 716 (1578)
.|||++|||+++||.+|||+|||+||++||||+++++.|+++|++|++||++|+|+.+|+.||++|......+. .+.+
T Consensus 3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~--~~~g 80 (378)
T PRK14278 3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGG--GGGG 80 (378)
T ss_pred CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccC--CCCC
Confidence 69999999999999999999999999999999999888999999999999999999999999999875211110 0111
Q ss_pred cCCCCCCCcccccccCCC
Q psy12972 717 FHNHMYNPFDDVFSEGFN 734 (1578)
Q Consensus 717 ~~~~~~~~f~~~F~~~Fg 734 (1578)
+. .+|.+|+++|+.+||
T Consensus 81 ~~-~~f~~~~d~f~~ffg 97 (378)
T PRK14278 81 FG-GGFGGLGDVFEAFFG 97 (378)
T ss_pred CC-cCcCchhHHHHHHhC
Confidence 11 124456677777765
No 54
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.1e-14 Score=175.58 Aligned_cols=98 Identities=39% Similarity=0.685 Sum_probs=76.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC--CC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD--SA 713 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~--~~ 713 (1578)
.|+|++|||+++||.+|||+|||+|+++||||+++ ++.++++|++|++||++|+|+.+|+.||++|..+...+.. ..
T Consensus 3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~~~~ 82 (365)
T PRK14285 3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGFEGF 82 (365)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCcccc
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998764221111 00
Q ss_pred CcccCC--CCCCCcccccccCCC
Q psy12972 714 SRNFHN--HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 714 ~~~~~~--~~~~~f~~~F~~~Fg 734 (1578)
..++.. ..|.+|+++|+.+||
T Consensus 83 ~~g~~~~~~~~~~~~d~f~~~fg 105 (365)
T PRK14285 83 SGGFSGFSDIFEDFGDIFDSFFT 105 (365)
T ss_pred CCCccccccccccHHHHHHHhhc
Confidence 011111 123457788888776
No 55
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.3e-14 Score=175.54 Aligned_cols=98 Identities=41% Similarity=0.769 Sum_probs=77.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|+|++|||+++||.++||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||.+|..+..+++ .+
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~--~~ 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG--GF 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC--CC
Confidence 479999999999999999999999999999999987 467889999999999999999999999999876422111 11
Q ss_pred cccCC--CCCCCcccccccCCCC
Q psy12972 715 RNFHN--HMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~--~~~~~f~~~F~~~Fg~ 735 (1578)
.+|.+ ..|..|.++|+.+||+
T Consensus 81 ~g~~~~~~~~~~f~d~f~~~fg~ 103 (373)
T PRK14301 81 GGFSSAEDIFSHFSDIFGDLFGF 103 (373)
T ss_pred CCcccccccccchHHHHHHHhhc
Confidence 12211 1244567777776653
No 56
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.3e-14 Score=175.29 Aligned_cols=99 Identities=39% Similarity=0.690 Sum_probs=77.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSAS 714 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~ 714 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||++|..+...++....
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~~~ 82 (366)
T PRK14294 3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGF 82 (366)
T ss_pred CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCCCc
Confidence 579999999999999999999999999999999997 4778999999999999999999999999999764221110000
Q ss_pred cccCCCCCCCcccccccCCCC
Q psy12972 715 RNFHNHMYNPFDDVFSEGFNF 735 (1578)
Q Consensus 715 ~~~~~~~~~~f~~~F~~~Fg~ 735 (1578)
.++. ..|..|+++|+.+||+
T Consensus 83 ~~~~-~~~~~~~d~f~~~fg~ 102 (366)
T PRK14294 83 SGFD-DIFSSFGDIFEDFFGF 102 (366)
T ss_pred Cccc-cchhhhhhhHHHhhcc
Confidence 1111 1234567778877763
No 57
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.5e-14 Score=175.31 Aligned_cols=70 Identities=47% Similarity=0.826 Sum_probs=66.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 72 (376)
T PRK14280 3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAG 72 (376)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccc
Confidence 3699999999999999999999999999999999988889999999999999999999999999999764
No 58
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=1.9e-14 Score=174.86 Aligned_cols=70 Identities=49% Similarity=0.872 Sum_probs=65.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~ 73 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTAD 73 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCccc
Confidence 469999999999999999999999999999999997 4678999999999999999999999999999764
No 59
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=99.49 E-value=3.7e-14 Score=142.39 Aligned_cols=103 Identities=17% Similarity=0.345 Sum_probs=87.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-chhhHhH-cCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-EQGLARR-LGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-~~~L~~k-~gV~~~~PT 932 (1578)
++++|.++|+..+...+.+++++|.||+|||++|+++.|.|.++++.+++.++.++.|||+. +..+|++ ++|++ +||
T Consensus 3 v~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~~~~~~~~~~~v~~-~Pt 81 (109)
T cd02993 3 VVTLSRAEIEALAKGERRNQSTLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGEQREFAKEELQLKS-FPT 81 (109)
T ss_pred ceeccHHHHHHHHhhhhcCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCccchhhHHhhcCCCc-CCE
Confidence 56789999998876555678999999999999999999999999999987669999999998 5788874 99997 999
Q ss_pred EEEEcCCc-cccccCC-CCCHHHHHHHH
Q psy12972 933 IALLTDGR-TSFFKEP-SFSVQKMVEFF 958 (1578)
Q Consensus 933 l~lf~~G~-~~~y~~G-~~s~~~L~~fi 958 (1578)
+++|.+|. ....|.| .++.++|++||
T Consensus 82 i~~f~~~~~~~~~y~g~~~~~~~l~~f~ 109 (109)
T cd02993 82 ILFFPKNSRQPIKYPSEQRDVDSLLMFV 109 (109)
T ss_pred EEEEcCCCCCceeccCCCCCHHHHHhhC
Confidence 99997764 3334556 58999999985
No 60
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.49 E-value=3.4e-14 Score=171.89 Aligned_cols=70 Identities=49% Similarity=0.887 Sum_probs=65.5
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++. +.|+++|++|++||++|+||.+|+.||++|..+
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~ 74 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVG 74 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccc
Confidence 5799999999999999999999999999999999873 568899999999999999999999999998754
No 61
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.49 E-value=2.9e-14 Score=173.16 Aligned_cols=70 Identities=51% Similarity=0.884 Sum_probs=66.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.++||+|||+||++||||+++++.++++|++|++||++|+||.+|+.||.+|...
T Consensus 2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~ 71 (382)
T PRK14291 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAA 71 (382)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccc
Confidence 4699999999999999999999999999999999988889999999999999999999999999998764
No 62
>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.
Probab=99.48 E-value=4.4e-14 Score=139.34 Aligned_cols=99 Identities=21% Similarity=0.429 Sum_probs=88.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++++|.++|++.+. +++++|.|||+||++|+.+.|.|+++++.+++ ..+.+++|||+.+..+|++|+|.+ +||
T Consensus 2 ~~~l~~~~f~~~~~----~~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt 76 (102)
T cd03005 2 VLELTEDNFDHHIA----EGNHFVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHRELCSEFQVRG-YPT 76 (102)
T ss_pred eeECCHHHHHHHhh----cCCEEEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCChhhHhhcCCCc-CCE
Confidence 46789999999873 23599999999999999999999999999976 249999999999999999999997 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHH
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+++|++|+....+.|.++.++|.+||
T Consensus 77 ~~~~~~g~~~~~~~G~~~~~~l~~~i 102 (102)
T cd03005 77 LLLFKDGEKVDKYKGTRDLDSLKEFV 102 (102)
T ss_pred EEEEeCCCeeeEeeCCCCHHHHHhhC
Confidence 99999998776677999999998875
No 63
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=2.7e-14 Score=173.68 Aligned_cols=68 Identities=46% Similarity=0.733 Sum_probs=64.9
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|.++|++|++||++|+||++|+.||++|.
T Consensus 8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~ 76 (392)
T PRK14279 8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR 76 (392)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence 479999999999999999999999999999999997 56789999999999999999999999999985
No 64
>KOG1234|consensus
Probab=99.48 E-value=1.5e-14 Score=159.74 Aligned_cols=95 Identities=20% Similarity=0.276 Sum_probs=88.7
Q ss_pred hhcCC-CCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhccccccccceeeeeeceeee----CCCEEEEEEe
Q psy12972 111 MVSLD-HVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQSMV----TDEALGIKLH 185 (1578)
Q Consensus 111 ls~r~-d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~~~PiasASi~QVh~----~g~~vavKv~ 185 (1578)
||-.+ .++|+...+.|++.++.+-.||..++.+++..++|.+|.+-|++||+.|.|+|||||||| +|.+||||||
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 45544 589999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCCchhhHHhhHHHHHhhcc
Q psy12972 186 EFHEATNERPDHEFHEATNE 205 (1578)
Q Consensus 186 ~p~v~~~i~~Dl~~~~~~~~ 205 (1578)
||||.+.|++|+..|-++..
T Consensus 82 YPGva~sI~SD~~nl~~lLn 101 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLN 101 (363)
T ss_pred CCchhhhccCcHHHHHHHHh
Confidence 99999999999997776653
No 65
>cd03001 PDI_a_P5 PDIa family, P5 subfamily; composed of eukaryotic proteins similar to human P5, a PDI-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. Some members of this subfamily are P5-like proteins containing only one redox active TRX domain.
Probab=99.48 E-value=7.4e-14 Score=138.00 Aligned_cols=100 Identities=25% Similarity=0.412 Sum_probs=88.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++++++|.+.+.+. +++++|.||++||++|+++.|.|.++++.+.+. +.++.+||++++++|++++|.+ +||++
T Consensus 2 v~~l~~~~~~~~i~~~--~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-~~~~~id~~~~~~~~~~~~i~~-~P~~~ 77 (103)
T cd03001 2 VVELTDSNFDKKVLNS--DDVWLVEFYAPWCGHCKNLAPEWKKAAKALKGI-VKVGAVDADVHQSLAQQYGVRG-FPTIK 77 (103)
T ss_pred eEEcCHHhHHHHHhcC--CCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-ceEEEEECcchHHHHHHCCCCc-cCEEE
Confidence 4578899999887544 567999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCC-ccccccCCCCCHHHHHHHH
Q psy12972 935 LLTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
+|.+| .....+.|.++.++|++|+
T Consensus 78 ~~~~~~~~~~~~~g~~~~~~l~~~~ 102 (103)
T cd03001 78 VFGAGKNSPQDYQGGRTAKAIVSAA 102 (103)
T ss_pred EECCCCcceeecCCCCCHHHHHHHh
Confidence 99988 3344456889999999997
No 66
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=3.9e-14 Score=172.21 Aligned_cols=70 Identities=50% Similarity=0.836 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+|+.+|+.||.+|..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~ 74 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAA 74 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccc
Confidence 369999999999999999999999999999999997 4678999999999999999999999999998753
No 67
>cd02956 ybbN ybbN protein family; ybbN is a hypothetical protein containing a redox-inactive TRX-like domain. Its gene has been sequenced from several gammaproteobacteria and actinobacteria.
Probab=99.47 E-value=9.8e-14 Score=135.64 Aligned_cols=95 Identities=17% Similarity=0.301 Sum_probs=84.4
Q ss_pred cccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc
Q psy12972 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941 (1578)
Q Consensus 862 nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~ 941 (1578)
+|++.+.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.+++|||+.++++|++|+|.+ +||+++|++|+.
T Consensus 2 ~f~~~i~~-~~~~~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~i~~-~Pt~~~~~~g~~ 78 (96)
T cd02956 2 NFQQVLQE-STQVPVVVDFWAPRSPPSKELLPLLERLAEEYQGQ-FVLAKVNCDAQPQIAQQFGVQA-LPTVYLFAAGQP 78 (96)
T ss_pred ChHHHHHh-cCCCeEEEEEECCCChHHHHHHHHHHHHHHHhCCc-EEEEEEeccCCHHHHHHcCCCC-CCEEEEEeCCEE
Confidence 56666643 23679999999999999999999999999999875 9999999999999999999998 999999999988
Q ss_pred ccccCCCCCHHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~ 959 (1578)
...+.|..+.++|.+|+.
T Consensus 79 ~~~~~g~~~~~~l~~~l~ 96 (96)
T cd02956 79 VDGFQGAQPEEQLRQMLD 96 (96)
T ss_pred eeeecCCCCHHHHHHHhC
Confidence 777779999999998873
No 68
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.46 E-value=5.8e-14 Score=169.50 Aligned_cols=97 Identities=42% Similarity=0.770 Sum_probs=76.8
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCccc
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASRNF 717 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~~~ 717 (1578)
|||++|||+++||.++||+|||+++++||||+++.+.+.++|++|++||++|+|+.+|+.||.+|..+...+....+.++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 79999999999999999999999999999999987788999999999999999999999999998764321111001111
Q ss_pred CC---CCCCCcccccccCCC
Q psy12972 718 HN---HMYNPFDDVFSEGFN 734 (1578)
Q Consensus 718 ~~---~~~~~f~~~F~~~Fg 734 (1578)
.. ..|.+|.++|+.+||
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg 100 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFG 100 (354)
T ss_pred CCccccCcCchhhhHHHHhc
Confidence 11 134556777877776
No 69
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=7.8e-14 Score=169.17 Aligned_cols=70 Identities=47% Similarity=0.852 Sum_probs=65.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|||++|||+++||.+|||+|||+||++||||+++ ++.|+++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 73 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAA 73 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccc
Confidence 479999999999999999999999999999999987 4678899999999999999999999999998754
No 70
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.45 E-value=4.9e-14 Score=171.75 Aligned_cols=67 Identities=40% Similarity=0.775 Sum_probs=63.0
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++|||||+++ .++|++|++||++|+||.+|+.||.+|..+
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~ 93 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEG 93 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchh
Confidence 5799999999999999999999999999999999864 589999999999999999999999998763
No 71
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.45 E-value=8.9e-14 Score=168.84 Aligned_cols=70 Identities=46% Similarity=0.823 Sum_probs=66.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++||||+|+++.|+++|++|++||++|+|+.+|+.||++|..+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g 73 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAG 73 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccc
Confidence 5799999999999999999999999999999999988889999999999999999999999999998753
No 72
>PRK09381 trxA thioredoxin; Provisional
Probab=99.44 E-value=2.5e-13 Score=136.09 Aligned_cols=104 Identities=21% Similarity=0.481 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|.+.+.+. +++++|.||+|||++|+.+.|.|+++++.+.+. +.++.|||+.++.++++|+|.+ +||++
T Consensus 5 v~~~~~~~~~~~v~~~--~~~vvv~f~~~~C~~C~~~~p~~~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 80 (109)
T PRK09381 5 IIHLTDDSFDTDVLKA--DGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 80 (109)
T ss_pred ceeeChhhHHHHHhcC--CCeEEEEEECCCCHHHHHHhHHHHHHHHHhCCC-cEEEEEECCCChhHHHhCCCCc-CCEEE
Confidence 5678889999877643 789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+......|..+.+.|..|+...+
T Consensus 81 ~~~~G~~~~~~~G~~~~~~l~~~i~~~~ 108 (109)
T PRK09381 81 LFKNGEVAATKVGALSKGQLKEFLDANL 108 (109)
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHhc
Confidence 9999998877778899999999998764
No 73
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.44 E-value=1.2e-13 Score=168.13 Aligned_cols=69 Identities=48% Similarity=0.895 Sum_probs=65.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||++|++||||+++ ++.++++|++|++||++|+|+.+|+.||++|..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g 70 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDG 70 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccc
Confidence 48999999999999999999999999999999997 4678999999999999999999999999998753
No 74
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=99.44 E-value=1.8e-13 Score=135.20 Aligned_cols=84 Identities=19% Similarity=0.406 Sum_probs=76.5
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
..+++++|.|||+||++|+.+.|.|+++++.+.+ +.+++||++ .++.+|++|+|.+ +||+++|++| ....+.|.+
T Consensus 16 ~~g~~vlV~F~a~WC~~C~~~~p~l~~la~~~~~--~~~~~vd~~~~~~~l~~~~~V~~-~PT~~lf~~g-~~~~~~G~~ 91 (100)
T cd02999 16 NREDYTAVLFYASWCPFSASFRPHFNALSSMFPQ--IRHLAIEESSIKPSLLSRYGVVG-FPTILLFNST-PRVRYNGTR 91 (100)
T ss_pred cCCCEEEEEEECCCCHHHHhHhHHHHHHHHHhcc--CceEEEECCCCCHHHHHhcCCee-cCEEEEEcCC-ceeEecCCC
Confidence 3578999999999999999999999999999974 789999998 7899999999998 9999999999 556677999
Q ss_pred CHHHHHHHH
Q psy12972 950 SVQKMVEFF 958 (1578)
Q Consensus 950 s~~~L~~fi 958 (1578)
+.++|.+|+
T Consensus 92 ~~~~l~~f~ 100 (100)
T cd02999 92 TLDSLAAFY 100 (100)
T ss_pred CHHHHHhhC
Confidence 999999985
No 75
>KOG1163|consensus
Probab=99.44 E-value=2.7e-13 Score=146.93 Aligned_cols=134 Identities=22% Similarity=0.304 Sum_probs=106.0
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|||||||-+|.|. ..+|++|||||-...++. |. +..|+
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--------------------pq-------------------L~yEs 61 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--------------------PQ-------------------LLYES 61 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCC--------------------cc-------------------hhHHH
Confidence 789999999999998 679999999998655442 11 13455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+-.+.++ +.+-+|.+.+-.+.+ +||||+.+ |.+|.|+.......++.+.+.-..-+++ ++.+|..||+|
T Consensus 62 kvY~iL~------~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiH 134 (341)
T KOG1163|consen 62 KVYRILQ------GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIH 134 (341)
T ss_pred HHHHHhc------cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcccc
Confidence 5555544 356789988766544 58999999 9999999988888888887766555555 78899999999
Q ss_pred cCCCCCCCCCC------eeEEecCCchhhhh
Q psy12972 564 ADPHSGNDVNT------WLYPVDLGDKFRLV 588 (1578)
Q Consensus 564 ~DpHPGNilv~------~v~liDfG~~~~l~ 588 (1578)
||+||.|+|.+ ++++||||.+-+.-
T Consensus 135 RDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 135 RDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred ccCCccceeeccccccceEEEEeccchhhhc
Confidence 99999999944 69999999875543
No 76
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=99.44 E-value=2.4e-13 Score=134.44 Aligned_cols=100 Identities=19% Similarity=0.407 Sum_probs=87.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.++|.++|++.+... +++++|.||+|||++|+.+.|.|+++++.+++ ..+.++++||+++ +++..+++.+ +||+
T Consensus 2 v~~l~~~~f~~~i~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~-~Pt~ 77 (104)
T cd02995 2 VKVVVGKNFDEVVLDS--DKDVLVEFYAPWCGHCKALAPIYEELAEKLKGDDNVVIAKMDATAN-DVPSEFVVDG-FPTI 77 (104)
T ss_pred eEEEchhhhHHHHhCC--CCcEEEEEECCCCHHHHHHhhHHHHHHHHhcCCCCEEEEEEeCcch-hhhhhccCCC-CCEE
Confidence 3578999999877544 58999999999999999999999999999987 3499999999987 6899999997 9999
Q ss_pred EEEcCCc--cccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDGR--TSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G~--~~~y~~G~~s~~~L~~fi 958 (1578)
++|++|. ....+.|..+.++|.+||
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~l~~fi 104 (104)
T cd02995 78 LFFPAGDKSNPIKYEGDRTLEDLIKFI 104 (104)
T ss_pred EEEcCCCcCCceEccCCcCHHHHHhhC
Confidence 9999887 445566999999999885
No 77
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.43 E-value=4.8e-13 Score=150.40 Aligned_cols=134 Identities=22% Similarity=0.223 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++++.|.+|+|+.+.. +++.||||+.+|..... .- +..++...-=|++||+
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~---~~-------------------------~~~~f~~g~~~e~Ea~ 87 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT---ER-------------------------FLKSFVKGDYYENLIV 87 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCch---HH-------------------------HHHhhhhhHHHHHHHH
Confidence 8899999999999766 68899999999876432 00 0001111122589999
Q ss_pred HHHHHHHhhCCCCCeeecEEe---eC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC
Q psy12972 489 NAERCSKDLAHLPYVYIPRIL---WD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~---~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G 560 (1578)
++.++.+. ++..|..+ .+ ++++.+|||||++|.+|.++.. ++ +++...+. ..+.++|..|
T Consensus 88 ~l~rL~~~-----GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~-~~~~~~i~-~~l~~lH~~g 155 (232)
T PRK10359 88 QTDRVRSE-----GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----IS-EDVKAKIK-ASIESLHQHG 155 (232)
T ss_pred HHHHHHHC-----CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----cc-HHHHHHHH-HHHHHHHHcC
Confidence 99999643 44445444 22 3577899999999999987632 22 23333333 3588999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCc
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGD 583 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~ 583 (1578)
++|||||||||+++ .+++||||.
T Consensus 156 i~H~Dikp~Nili~~~gi~liDfg~ 180 (232)
T PRK10359 156 MVSGDPHKGNFIVSKNGLRIIDLSG 180 (232)
T ss_pred CccCCCChHHEEEeCCCEEEEECCC
Confidence 99999999999964 255566554
No 78
>PHA02278 thioredoxin-like protein
Probab=99.43 E-value=1.8e-13 Score=135.59 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=80.5
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc----hhhHhHcCccccCCcEEE
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~----~~L~~k~gV~~~~PTl~l 935 (1578)
.++|.+.+ +.+++++|.|||||||+|+.+.|.++++++.+... +.+++||++.+ ++++++|+|.+ .||+++
T Consensus 4 ~~~~~~~i---~~~~~vvV~F~A~WCgpCk~m~p~l~~l~~~~~~~-~~~~~vdvd~~~~d~~~l~~~~~I~~-iPT~i~ 78 (103)
T PHA02278 4 LVDLNTAI---RQKKDVIVMITQDNCGKCEILKSVIPMFQESGDIK-KPILTLNLDAEDVDREKAVKLFDIMS-TPVLIG 78 (103)
T ss_pred HHHHHHHH---hCCCcEEEEEECCCCHHHHhHHHHHHHHHhhhcCC-ceEEEEECCccccccHHHHHHCCCcc-ccEEEE
Confidence 35566666 45899999999999999999999999999886544 78999999986 68999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHH
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEF 957 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~f 957 (1578)
|++|+.+....|..+.+.|.++
T Consensus 79 fk~G~~v~~~~G~~~~~~l~~~ 100 (103)
T PHA02278 79 YKDGQLVKKYEDQVTPMQLQEL 100 (103)
T ss_pred EECCEEEEEEeCCCCHHHHHhh
Confidence 9999988777788888887765
No 79
>TIGR01126 pdi_dom protein disulfide-isomerase domain. This model describes a domain of eukaryotic protein disulfide isomerases, generally found in two copies. The high cutoff for total score reflects the expectation of finding both copies. The domain is similar to thioredoxin but the redox-active disulfide region motif is APWCGHCK.
Probab=99.43 E-value=3.5e-13 Score=132.61 Aligned_cols=100 Identities=29% Similarity=0.497 Sum_probs=89.0
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc-eEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
|+.++|++.+. .+++++|.||++||++|+.+.|.|+++++.+++.+ +.++.+||++++.+|++|+|.+ +|++++|
T Consensus 1 l~~~~~~~~~~---~~~~~~i~f~~~~C~~c~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~-~P~~~~~ 76 (102)
T TIGR01126 1 LTASNFDDIVL---SNKDVLVEFYAPWCGHCKNLAPEYEKLAKELKGDPDIVLAKVDATAEKDLASRFGVSG-FPTIKFF 76 (102)
T ss_pred CchhhHHHHhc---cCCcEEEEEECCCCHHHHhhChHHHHHHHHhccCCceEEEEEEccchHHHHHhCCCCc-CCEEEEe
Confidence 46778888773 57899999999999999999999999999998753 9999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
.+|+....+.|..+.++|..|+.++
T Consensus 77 ~~~~~~~~~~g~~~~~~l~~~i~~~ 101 (102)
T TIGR01126 77 PKGKKPVDYEGGRDLEAIVEFVNEK 101 (102)
T ss_pred cCCCcceeecCCCCHHHHHHHHHhc
Confidence 8887555566999999999999875
No 80
>KOG0719|consensus
Probab=99.41 E-value=4.4e-14 Score=151.55 Aligned_cols=121 Identities=40% Similarity=0.618 Sum_probs=91.3
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC---ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN---DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD 711 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~---~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~ 711 (1578)
...|+|++|||.++|+..+|++||++++++||||+++ ...++++|+++++||+||+|.++|+.||..|..+..++
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~~-- 89 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDESG-- 89 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCccc--
Confidence 3569999999999999999999999999999999995 35688999999999999999999999999988863221
Q ss_pred CCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceecccccc
Q psy12972 712 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDW 776 (1578)
Q Consensus 712 ~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApw 776 (1578)
.-..++-++|...|. ..++.+++ +|...+.+++..+.-|+..|--.
T Consensus 90 --------d~~~~~~e~~~~iyk-~VteedIe----------ef~a~Y~gSEeEk~Dl~~~Y~k~ 135 (264)
T KOG0719|consen 90 --------DIDEDWLEFWRAIYK-KVTEEDIE----------EFEANYQGSEEEKKDLLKLYNKF 135 (264)
T ss_pred --------hhhhHHHHHHHHHHh-hcccccHH----------HHHHHhcccHHHHHHHHHHHHhc
Confidence 111123333333333 22333332 78888888888887777666543
No 81
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.41 E-value=1.7e-13 Score=161.89 Aligned_cols=69 Identities=36% Similarity=0.693 Sum_probs=65.4
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|||++|||++++|.+|||+|||+|+++||||+++++.++++|++|++||++|+|+.+|+.||.+|..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~ 71 (306)
T PRK10266 3 LKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH 71 (306)
T ss_pred cCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhcc
Confidence 469999999999999999999999999999999998888999999999999999999999999998753
No 82
>cd02997 PDI_a_PDIR PDIa family, PDIR subfamily; composed of proteins similar to human PDIR (for Protein Disulfide Isomerase Related). PDIR is composed of three redox active TRX (a) domains and an N-terminal redox inactive TRX-like (b) domain. Similar to PDI, it is involved in oxidative protein folding in the endoplasmic reticulum (ER) through its isomerase and chaperone activities. These activities are lower compared to PDI, probably due to PDIR acting only on a subset of proteins. PDIR is preferentially expressed in cells actively secreting proteins and its expression is induced by stress. Similar to PDI, the isomerase and chaperone activities of PDIR are independent; CXXC mutants lacking isomerase activity retain chaperone activity.
Probab=99.41 E-value=4e-13 Score=132.89 Aligned_cols=100 Identities=22% Similarity=0.382 Sum_probs=87.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECcc--chhhHhHcCccccCC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHN--EQGLARRLGVGSQLP 931 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~--~~~L~~k~gV~~~~P 931 (1578)
+++++..+|++.+ +.+++++|.||++||++|+++.|.+.++++.+.+ ..+.++.+||+. +..+|++++|.+ +|
T Consensus 2 ~~~l~~~~~~~~~---~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~i~~-~P 77 (104)
T cd02997 2 VVHLTDEDFRKFL---KKEKHVLVMFYAPWCGHCKKMKPEFTKAATELKEDGKGVLAAVDCTKPEHDALKEEYNVKG-FP 77 (104)
T ss_pred eEEechHhHHHHH---hhCCCEEEEEECCCCHHHHHhCHHHHHHHHHHhhCCceEEEEEECCCCccHHHHHhCCCcc-cc
Confidence 4578888998877 3456999999999999999999999999999873 238999999998 899999999997 99
Q ss_pred cEEEEcCCccccccCCCCCHHHHHHHH
Q psy12972 932 QIALLTDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 932 Tl~lf~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
|+++|++|+....+.|..+.+++.+|+
T Consensus 78 t~~~~~~g~~~~~~~g~~~~~~l~~~l 104 (104)
T cd02997 78 TFKYFENGKFVEKYEGERTAEDIIEFM 104 (104)
T ss_pred EEEEEeCCCeeEEeCCCCCHHHHHhhC
Confidence 999999998776777999999999885
No 83
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=1.7e-13 Score=165.90 Aligned_cols=69 Identities=38% Similarity=0.743 Sum_probs=65.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+++++||||+++++.++++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 71 (372)
T PRK14300 3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDA 71 (372)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccc
Confidence 699999999999999999999999999999999987788999999999999999999999999998753
No 84
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.40 E-value=3.4e-13 Score=163.96 Aligned_cols=69 Identities=48% Similarity=0.894 Sum_probs=64.6
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccc----cCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDL----FGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~----~~~~ 704 (1578)
..|||++|||+++||.+|||+|||+|+++||||+++ ++.++++|++|++||++|+||.+|+.||+ +|..
T Consensus 8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~ 81 (389)
T PRK14295 8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNG 81 (389)
T ss_pred ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccc
Confidence 369999999999999999999999999999999987 46789999999999999999999999998 7764
No 85
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.39 E-value=2.8e-13 Score=164.44 Aligned_cols=69 Identities=54% Similarity=0.919 Sum_probs=66.3
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+|+|++|||+++||.++||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~ 70 (371)
T PRK14292 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAP 70 (371)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcc
Confidence 699999999999999999999999999999999988889999999999999999999999999999764
No 86
>TIGR02187 GlrX_arch Glutaredoxin-like domain protein. This family of archaeal proteins contains a C-terminal domain with homology to bacterial and eukaryotic glutaredoxins, including a CPYC motif. There is an N-terminal domain which has even more distant homology to glutaredoxins. The name "glutaredoxin" may be inappropriate in the sense of working in tandem with glutathione and glutathione reductase which may not be present in the archaea. The overall domain structure appears to be related to bacterial alkylhydroperoxide reductases, but the homology may be distant enough that the function of this family is wholly different.
Probab=99.39 E-value=4.5e-12 Score=142.88 Aligned_cols=186 Identities=13% Similarity=0.184 Sum_probs=124.5
Q ss_pred CCcEEEEEEc---CCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccc-cccCCC
Q psy12972 873 TTPHLILFYS---DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTS-FFKEPS 948 (1578)
Q Consensus 873 ~~~~LV~Fya---pwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~-~y~~G~ 948 (1578)
+...++.|++ +||++|+.+.|.++++++.+.+..+.++.+|.+++++++++|+|.+ +||+++|++|+.. ..+.|.
T Consensus 19 ~~~~i~~f~~~~a~wC~~C~~~~p~l~~la~~~~~~~i~~v~vd~~~~~~l~~~~~V~~-~Pt~~~f~~g~~~~~~~~G~ 97 (215)
T TIGR02187 19 NPVEIVVFTDNDKEGCQYCKETEQLLEELSEVSPKLKLEIYDFDTPEDKEEAEKYGVER-VPTTIILEEGKDGGIRYTGI 97 (215)
T ss_pred CCeEEEEEcCCCCCCCCchHHHHHHHHHHHhhCCCceEEEEecCCcccHHHHHHcCCCc-cCEEEEEeCCeeeEEEEeec
Confidence 4555777988 9999999999999999999864336677777779999999999998 9999999999876 356688
Q ss_pred CCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcEEEEEe-c---cCCchHHHHHHHHhhcCCCeEEEEEEccc
Q psy12972 949 FSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKVHALLF-Q---RSLPVRLRYLINAFKHRTTIVFGVIVYDQ 1023 (1578)
Q Consensus 949 ~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~~VlfF-~---~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~ 1023 (1578)
.+.+++.+|+...+.- .....++.++.+.+.+.. +.+.+.+| . .........+.......+.+.|..++ .
T Consensus 98 ~~~~~l~~~i~~~~~~~~~~~~L~~~~~~~l~~~~---~pv~I~~F~a~~C~~C~~~~~~l~~l~~~~~~i~~~~vD--~ 172 (215)
T TIGR02187 98 PAGYEFAALIEDIVRVSQGEPGLSEKTVELLQSLD---EPVRIEVFVTPTCPYCPYAVLMAHKFALANDKILGEMIE--A 172 (215)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHhcC---CCcEEEEEECCCCCCcHHHHHHHHHHHHhcCceEEEEEe--C
Confidence 8889999999866421 112334444444444322 33344434 2 22222222222222224567777664 4
Q ss_pred CCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 1024 EDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 1024 ~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
..++++.++|+|.+ .||+++++++.. ..+..+...+.+|+.
T Consensus 173 ~~~~~~~~~~~V~~-vPtl~i~~~~~~------~~G~~~~~~l~~~l~ 213 (215)
T TIGR02187 173 NENPDLAEKYGVMS-VPKIVINKGVEE------FVGAYPEEQFLEYIL 213 (215)
T ss_pred CCCHHHHHHhCCcc-CCEEEEecCCEE------EECCCCHHHHHHHHH
Confidence 47888999999987 679999865421 123334455666654
No 87
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.39 E-value=3.1e-13 Score=164.84 Aligned_cols=69 Identities=45% Similarity=0.864 Sum_probs=65.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+|+++||||+++ ++.|+++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~ 72 (397)
T PRK14281 3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAG 72 (397)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchh
Confidence 69999999999999999999999999999999997 4678899999999999999999999999998753
No 88
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.39 E-value=3.7e-13 Score=162.76 Aligned_cols=69 Identities=46% Similarity=0.840 Sum_probs=64.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+|+++||||+++. ..|.++|++|++||++|+|+.+|+.||.+|..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~ 73 (365)
T PRK14290 3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVD 73 (365)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcc
Confidence 699999999999999999999999999999999974 268899999999999999999999999999764
No 89
>smart00090 RIO RIO-like kinase.
Probab=99.38 E-value=1.5e-12 Score=148.86 Aligned_cols=154 Identities=22% Similarity=0.186 Sum_probs=98.1
Q ss_pred cccccccceEEEEEE--ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAV--TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~--l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
++||.|++|+||+|+ ..+|++||||+.+++.......+. +. ......-....+.... .+..+..|
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~---------~~~~~~~E 100 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--YV--DGDFRFKYRKINPRKL---------VRLWAEKE 100 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--hc--ccchhhccCCCCHHHH---------HHHHHHHH
Confidence 589999999999998 679999999999986532111110 00 0000000000011111 12346889
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHH---HHHHHHHHHHHHHHHcC-cc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLAD---VDRKLFTAFAEQIFQTG-FV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~---v~~~l~~~~l~~i~~~G-~v 562 (1578)
++|+.++... .+.+|+++.. ++.+|||||++|..+.... +.....+... ++..++. .+.++|..| ++
T Consensus 101 ~~~L~~L~~~-----~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~-~~~~~~~~~~~~~i~~qi~~-~l~~LH~~g~ii 171 (237)
T smart00090 101 FRNLQRLYEA-----GVPVPKPIAW--RRNVLVMEFIGGDGLPAPR-LKDVEPEEEEEFELYDDILE-EMRKLYKEGELV 171 (237)
T ss_pred HHHHHHHHhc-----CCCCCeeeEe--cCceEEEEEecCCcccccc-cccCCcchHHHHHHHHHHHH-HHHHHHhcCCEE
Confidence 9999999742 5778888853 4679999999998876542 1222333332 3333333 277899999 99
Q ss_pred ccCCCCCCCCCC--eeEEecCCch
Q psy12972 563 HADPHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~--~v~liDfG~~ 584 (1578)
|+|+||+||++. .++++|||..
T Consensus 172 H~Dikp~NIli~~~~i~LiDFg~a 195 (237)
T smart00090 172 HGDLSEYNILVHDGKVVIIDVSQS 195 (237)
T ss_pred eCCCChhhEEEECCCEEEEEChhh
Confidence 999999999963 5777777754
No 90
>cd02948 TRX_NDPK TRX domain, TRX and NDP-kinase (NDPK) fusion protein family; most members of this group are fusion proteins which contain one redox active TRX domain containing a CXXC motif and three NDPK domains, and are characterized as intermediate chains (ICs) of axonemal outer arm dynein. Dyneins are molecular motors that generate force against microtubules to produce cellular movement, and are divided into two classes: axonemal and cytoplasmic. They are supramolecular complexes consisting of three protein groups classified according to size: dynein heavy, intermediate and light chains. Axonemal dyneins form two structures, the inner and outer arms, which are attached to doublet microtubules throughout the cilia and flagella. The human homolog is the sperm-specific Sptrx-2, presumed to be a component of the human sperm axoneme architecture. Included in this group is another human protein, TRX-like protein 2, a smaller fusion protein containing one TRX and one NDPK domain, which
Probab=99.38 E-value=6.5e-13 Score=131.76 Aligned_cols=97 Identities=18% Similarity=0.249 Sum_probs=84.1
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
-|.++|++.+ +.+++++|.|||+||++|+.+.|.++++++.+++..+.|+.+|++ +.+++++|+|++ +||+++|+
T Consensus 5 ~~~~~~~~~i---~~~~~vvv~F~a~wC~~Ck~~~p~l~~~~~~~~~~~~~~~~vd~d-~~~~~~~~~v~~-~Pt~~~~~ 79 (102)
T cd02948 5 NNQEEWEELL---SNKGLTVVDVYQEWCGPCKAVVSLFKKIKNELGDDLLHFATAEAD-TIDTLKRYRGKC-EPTFLFYK 79 (102)
T ss_pred cCHHHHHHHH---ccCCeEEEEEECCcCHhHHHHhHHHHHHHHHcCCCcEEEEEEeCC-CHHHHHHcCCCc-CcEEEEEE
Confidence 3567788865 347899999999999999999999999999997655899999999 778999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHh
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
+|+......| .+.+.|.++|.+
T Consensus 80 ~g~~~~~~~G-~~~~~~~~~i~~ 101 (102)
T cd02948 80 NGELVAVIRG-ANAPLLNKTITE 101 (102)
T ss_pred CCEEEEEEec-CChHHHHHHHhh
Confidence 9998877767 477888888864
No 91
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.38 E-value=3.9e-13 Score=163.09 Aligned_cols=69 Identities=43% Similarity=0.850 Sum_probs=66.1
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++||.+|||+|||+++++||||+++++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g 71 (374)
T PRK14293 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAG 71 (374)
T ss_pred CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccc
Confidence 699999999999999999999999999999999988889999999999999999999999999998753
No 92
>KOG0716|consensus
Probab=99.37 E-value=2.8e-13 Score=149.45 Aligned_cols=73 Identities=45% Similarity=0.867 Sum_probs=68.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|.|++||++++|+.++|||+||+|++++|||++++ |++.++|++||+||+||+||.+|..||.+|..+
T Consensus 27 ~~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~ 100 (279)
T KOG0716|consen 27 DVIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELG 100 (279)
T ss_pred ccchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHH
Confidence 3446789999999999999999999999999999999986 899999999999999999999999999998874
No 93
>PLN02309 5'-adenylylsulfate reductase
Probab=99.37 E-value=7.3e-13 Score=161.96 Aligned_cols=107 Identities=20% Similarity=0.422 Sum_probs=93.3
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHh-HcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLAR-RLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~-k~gV~~~~P 931 (1578)
.++++|.+||++.+...+.+++++|.||||||++|+.+.|.|+++|+.+.+.++.|++|||+ .+..+|+ +|+|++ ||
T Consensus 346 ~Vv~Lt~~nfe~ll~~~~~~k~vlV~FyApWC~~Cq~m~p~~e~LA~~~~~~~V~f~kVD~d~~~~~la~~~~~I~~-~P 424 (457)
T PLN02309 346 NVVALSRAGIENLLKLENRKEPWLVVLYAPWCPFCQAMEASYEELAEKLAGSGVKVAKFRADGDQKEFAKQELQLGS-FP 424 (457)
T ss_pred CcEECCHHHHHHHHHhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCeEEEEEECCCcchHHHHhhCCCce-ee
Confidence 45789999999987544568999999999999999999999999999998777999999999 8889997 699997 99
Q ss_pred cEEEEcCCc--cccccCCCCCHHHHHHHHHhh
Q psy12972 932 QIALLTDGR--TSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 932 Tl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
||++|++|. .+.|.+|.++.++|++||+..
T Consensus 425 Til~f~~g~~~~v~Y~~~~R~~~~L~~fv~~~ 456 (457)
T PLN02309 425 TILLFPKNSSRPIKYPSEKRDVDSLLSFVNSL 456 (457)
T ss_pred EEEEEeCCCCCeeecCCCCcCHHHHHHHHHHh
Confidence 999998775 345555689999999999753
No 94
>cd02998 PDI_a_ERp38 PDIa family, endoplasmic reticulum protein 38 (ERp38) subfamily; composed of proteins similar to the P5-like protein first isolated from alfalfa, which contains two redox active TRX (a) domains at the N-terminus, like human P5, and a C-terminal domain with homology to the C-terminal domain of ERp29, unlike human P5. The cDNA clone of this protein (named G1) was isolated from an alfalfa cDNA library by screening with human protein disulfide isomerase (PDI) cDNA. The G1 protein is constitutively expressed in all major organs of the plant and its expression is induced by treatment with tunicamycin, indicating that it may be a glucose-regulated protein. The G1 homolog in the eukaryotic social amoeba Dictyostelium discoideum is also described as a P5-like protein, which is located in the endoplasmic reticulum (ER) despite the absence of an ER-retrieval signal. G1 homologs from Aspergillus niger and Neurospora crassa have also been characterized, and are named TIGA and ER
Probab=99.37 E-value=1.5e-12 Score=128.86 Aligned_cols=100 Identities=24% Similarity=0.461 Sum_probs=86.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECcc-chhhHhHcCccccCCcE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHN-EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~-~~~L~~k~gV~~~~PTl 933 (1578)
.+++.++|++.+... +++++|.||++||++|+.+.|.|.++++.++.. ++.++.+||+. ++.+|++++|.+ +|++
T Consensus 3 ~~l~~~~~~~~~~~~--~~~~~v~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~i~~-~P~~ 79 (105)
T cd02998 3 VELTDSNFDKVVGDD--KKDVLVEFYAPWCGHCKNLAPEYEKLAAVFANEDDVVIAKVDADEANKDLAKKYGVSG-FPTL 79 (105)
T ss_pred EEcchhcHHHHhcCC--CCcEEEEEECCCCHHHHhhChHHHHHHHHhCCCCCEEEEEEECCCcchhhHHhCCCCC-cCEE
Confidence 568889999866433 569999999999999999999999999999732 49999999999 899999999998 9999
Q ss_pred EEEcCC-ccccccCCCCCHHHHHHHH
Q psy12972 934 ALLTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 934 ~lf~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
++|.+| .....+.|.++.++|.+|+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~l~~~i 105 (105)
T cd02998 80 KFFPKGSTEPVKYEGGRDLEDLVKFV 105 (105)
T ss_pred EEEeCCCCCccccCCccCHHHHHhhC
Confidence 999877 4555566889999999885
No 95
>KOG0721|consensus
Probab=99.36 E-value=8.5e-13 Score=141.08 Aligned_cols=94 Identities=33% Similarity=0.615 Sum_probs=80.4
Q ss_pred cchhhhHHHHHHhhhhhhh----hccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHH
Q psy12972 613 MNFNLIMLWYTFLLNVLFI----NCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYN 687 (1578)
Q Consensus 613 ~~~~l~~lw~~~~l~~~~~----~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~ 687 (1578)
.+.-++.+|..+++...-+ ......|||+|||+++++|..|||+|||+|+.++||||++. .+.++.|..|++||+
T Consensus 71 ~~i~lv~~W~v~~fL~y~i~~~~~~~~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~ 150 (230)
T KOG0721|consen 71 RKVFLVVGWAVIAFLIYKIMNSRRERQKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQ 150 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHH
Confidence 4455567887777666433 23445799999999999999999999999999999999987 667788999999999
Q ss_pred HcCCHHHHHhccccCCCCC
Q psy12972 688 ILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 688 ~L~d~~~R~~yD~~~~~~~ 706 (1578)
.|+|+..|..|..+|+.++
T Consensus 151 aLTD~~sreN~ekYG~PDG 169 (230)
T KOG0721|consen 151 ALTDKKSRENWEKYGNPDG 169 (230)
T ss_pred HhcchhhHHHHHHhCCCCC
Confidence 9999999999999999975
No 96
>cd03000 PDI_a_TMX3 PDIa family, TMX3 subfamily; composed of eukaryotic proteins similar to human TMX3, a TRX related transmembrane protein containing one redox active TRX domain at the N-terminus and a classical ER retrieval sequence for type I transmembrane proteins at the C-terminus. The TMX3 transcript is found in a variety of tissues with the highest levels detected in skeletal muscle and the heart. In vitro, TMX3 showed oxidase activity albeit slightly lower than that of protein disulfide isomerase.
Probab=99.36 E-value=1.6e-12 Score=129.33 Aligned_cols=95 Identities=23% Similarity=0.359 Sum_probs=81.7
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
++|++. ..+++++|.||++||++|+.+.|.|+++++.+++. ++.++.+||+.++.+|++++|.+ +||+++|++
T Consensus 7 ~~~~~~----~~~~~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~I~~-~Pt~~l~~~ 81 (104)
T cd03000 7 DSFKDV----RKEDIWLVDFYAPWCGHCKKLEPVWNEVGAELKSSGSPVRVGKLDATAYSSIASEFGVRG-YPTIKLLKG 81 (104)
T ss_pred hhhhhh----ccCCeEEEEEECCCCHHHHhhChHHHHHHHHHHhcCCcEEEEEEECccCHhHHhhcCCcc-ccEEEEEcC
Confidence 566663 34679999999999999999999999999999643 38999999999999999999998 999999987
Q ss_pred CccccccCCCCCHHHHHHHHHhh
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|.... +.|..+.+.|.+|+++.
T Consensus 82 ~~~~~-~~G~~~~~~l~~~~~~~ 103 (104)
T cd03000 82 DLAYN-YRGPRTKDDIVEFANRV 103 (104)
T ss_pred CCcee-ecCCCCHHHHHHHHHhh
Confidence 75544 56889999999999763
No 97
>KOG0624|consensus
Probab=99.36 E-value=9e-13 Score=148.25 Aligned_cols=72 Identities=42% Similarity=0.672 Sum_probs=65.9
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
-+..+|||+||||.++|+..||-||||++|.+||||...++ .|+.+|.-|..|-++|+||++|+.+|+.-.+
T Consensus 390 qs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDnGeDP 465 (504)
T KOG0624|consen 390 QSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDNGEDP 465 (504)
T ss_pred HhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccCCCCC
Confidence 56689999999999999999999999999999999988763 4889999999999999999999999986554
No 98
>PRK10996 thioredoxin 2; Provisional
Probab=99.36 E-value=1.2e-12 Score=137.32 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=92.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++..+|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.+++||++++++++++|+|.+ +||++
T Consensus 37 ~i~~~~~~~~~~i---~~~k~vvv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~V~~-~Ptli 111 (139)
T PRK10996 37 VINATGETLDKLL---QDDLPVVIDFWAPWCGPCRNFAPIFEDVAAERSGK-VRFVKVNTEAERELSARFRIRS-IPTIM 111 (139)
T ss_pred CEEcCHHHHHHHH---hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEeCCCCHHHHHhcCCCc-cCEEE
Confidence 3457888898866 44789999999999999999999999999998765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+......|..+.+.|.+|+.+.
T Consensus 112 i~~~G~~v~~~~G~~~~e~l~~~l~~~ 138 (139)
T PRK10996 112 IFKNGQVVDMLNGAVPKAPFDSWLNEA 138 (139)
T ss_pred EEECCEEEEEEcCCCCHHHHHHHHHHh
Confidence 999999887778999999999999865
No 99
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=99.36 E-value=8.5e-13 Score=131.95 Aligned_cols=91 Identities=13% Similarity=0.322 Sum_probs=77.0
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
++|++.+.. +.+++++|.|||+||++|+.+.|.++++|.++.+. +.|++||++++++++++|+|.+ .||+++|++|+
T Consensus 3 ~~~~~~i~~-~~~~~vVV~F~A~WCgpCk~m~P~le~la~~~~~~-v~f~kVDvD~~~~la~~~~V~~-iPTf~~fk~G~ 79 (114)
T cd02954 3 WAVDQAILS-EEEKVVVIRFGRDWDPVCMQMDEVLAKIAEDVSNF-AVIYLVDIDEVPDFNKMYELYD-PPTVMFFFRNK 79 (114)
T ss_pred HHHHHHHhc-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHcCCCC-CCEEEEEECCE
Confidence 345555532 24789999999999999999999999999999876 8999999999999999999998 99999999999
Q ss_pred cccccCCCCCHHHH
Q psy12972 941 TSFFKEPSFSVQKM 954 (1578)
Q Consensus 941 ~~~y~~G~~s~~~L 954 (1578)
.+....|..+...|
T Consensus 80 ~v~~~~G~~~~~~~ 93 (114)
T cd02954 80 HMKIDLGTGNNNKI 93 (114)
T ss_pred EEEEEcCCCCCceE
Confidence 87666665554433
No 100
>TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent. This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis.
Probab=99.36 E-value=9.3e-13 Score=161.02 Aligned_cols=106 Identities=21% Similarity=0.401 Sum_probs=90.9
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-hhH-hHcCccccCC
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-GLA-RRLGVGSQLP 931 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-~L~-~k~gV~~~~P 931 (1578)
.+++||.+||++.+...+.+++++|.||||||++|+.+.|.|+++|+.+++.++.|++|||+.+. .++ ++|+|.+ ||
T Consensus 352 ~Vv~L~~~nf~~~v~~~~~~k~VLV~FyApWC~~Ck~m~P~~eelA~~~~~~~v~~~kVdvD~~~~~~~~~~~~I~~-~P 430 (463)
T TIGR00424 352 NVVSLSRPGIENLLKLEERKEAWLVVLYAPWCPFCQAMEASYLELAEKLAGSGVKVAKFRADGDQKEFAKQELQLGS-FP 430 (463)
T ss_pred CeEECCHHHHHHHHhhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCcEEEEEECCCCccHHHHHHcCCCc-cc
Confidence 56789999999987434568899999999999999999999999999998767999999999764 454 7899997 99
Q ss_pred cEEEEcCCc--cccccCCCCCHHHHHHHHHh
Q psy12972 932 QIALLTDGR--TSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 932 Tl~lf~~G~--~~~y~~G~~s~~~L~~fi~~ 960 (1578)
||++|++|. .+.|..|.++.++|+.||+.
T Consensus 431 Tii~Fk~g~~~~~~Y~~g~R~~e~L~~Fv~~ 461 (463)
T TIGR00424 431 TILFFPKHSSRPIKYPSEKRDVDSLMSFVNL 461 (463)
T ss_pred eEEEEECCCCCceeCCCCCCCHHHHHHHHHh
Confidence 999999885 34555568999999999964
No 101
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.35 E-value=1.4e-12 Score=143.15 Aligned_cols=142 Identities=22% Similarity=0.306 Sum_probs=92.6
Q ss_pred EEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCC------CCCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q psy12972 419 VFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYP------KFDFQWVINELKVPLEQELDFLNEGRNAER 492 (1578)
Q Consensus 419 VhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~------~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r 492 (1578)
||.|...+|++||||+-+.+... ++. ..+....-.. ..+...+.. .--++|++|+.+
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~-Fk~-------~~~y~~~~~r~~~~~~~~~~~~~~~---------~~~~~E~~~L~~ 64 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTS-FKR-------RKKYRDYDYRFKKYRHKSSWRYLIR---------EWAKKEFRNLKR 64 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---S-S-H-------HHHHTTTSTTSTTC--G--CHHHHH---------HHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceE-EEE-------eeeeecccchhcccccccCHHHHHH---------HHHHHHHHHHHH
Confidence 89999999999999999987543 221 1122221111 011222222 344789999999
Q ss_pred HHHhhCCCCCeeecEEeeCCCCceEEEEeccC--CCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCC
Q psy12972 493 CSKDLAHLPYVYIPRILWDKSSTRVLTTEFID--GVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570 (1578)
Q Consensus 493 ~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~--G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGN 570 (1578)
+.+ .++.||+|+ ..++++||||||+ |.++..+.........+.++...+++.+..+++..|++|+||++.|
T Consensus 65 l~~-----~Gv~vP~p~--~~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~N 137 (188)
T PF01163_consen 65 LYE-----AGVPVPKPY--DYNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYN 137 (188)
T ss_dssp CCC-----TT-SS--EE--EEETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTS
T ss_pred HHH-----CCccCCcEE--EEeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhh
Confidence 864 358899999 4579999999999 9999887554322456788888888888889999999999999999
Q ss_pred CCCC--eeEEecCCch
Q psy12972 571 DVNT--WLYPVDLGDK 584 (1578)
Q Consensus 571 ilv~--~v~liDfG~~ 584 (1578)
||++ ++++||||..
T Consensus 138 Ilv~~~~~~iIDf~qa 153 (188)
T PF01163_consen 138 ILVDDGKVYIIDFGQA 153 (188)
T ss_dssp EEEETTCEEE--GTTE
T ss_pred EEeecceEEEEecCcc
Confidence 9964 5888888854
No 102
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.35 E-value=4.2e-12 Score=139.30 Aligned_cols=153 Identities=21% Similarity=0.201 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+|++|+||+|+..+|++||||+.+|+.......+...+ ....... ...++..+. .+....|.+
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~---------~~~~~~e~~ 69 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGR-KKSNWRYLS---------RLWAEKEFR 69 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhcc-CCcchhhhh---------hHHHHHHHH
Confidence 579999999999999889999999999987544322221111 0111100 011111111 122356667
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCc-----CCchhhHhhcCCCHHHHHHHHHHHHHHHHHH-cCcc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVK-----ISDKEGLLEKGFSLADVDRKLFTAFAEQIFQ-TGFV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~-----l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~-~G~v 562 (1578)
++.++... .+.+|+++. +...+|||||++|.. +.+... . .....++..++.+ +..+|. .|++
T Consensus 70 ~l~~l~~~-----~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~---~-~~~~~~~~~~~~~-l~~lh~~~~iv 137 (187)
T cd05119 70 NLKRLYEA-----GVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRL---L-EDPEELYDQILEL-MRKLYREAGLV 137 (187)
T ss_pred HHHHHHHc-----CCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhh---c-ccHHHHHHHHHHH-HHHHhhccCcC
Confidence 77777542 366888874 456799999999943 333211 0 2233444444443 567787 9999
Q ss_pred ccCCCCCCCCCC--eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|+|+||+||++. .++++|||...+
T Consensus 138 H~Dl~p~Nili~~~~~~liDfg~a~~ 163 (187)
T cd05119 138 HGDLSEYNILVDDGKVYIIDVPQAVE 163 (187)
T ss_pred cCCCChhhEEEECCcEEEEECccccc
Confidence 999999999964 477788876643
No 103
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.35 E-value=5.3e-13 Score=120.74 Aligned_cols=62 Identities=56% Similarity=0.989 Sum_probs=58.9
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh--HHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT--AQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
|||++|||+++++.++||++|+++++++|||+++... +.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 5899999999999999999999999999999987655 8899999999999999999999998
No 104
>TIGR01068 thioredoxin thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model.
Probab=99.34 E-value=2.2e-12 Score=126.48 Aligned_cols=100 Identities=23% Similarity=0.493 Sum_probs=87.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.|||+.+..++++|+|.+ +||+++|++
T Consensus 2 ~~~~~~~~~~~--~~~~vvi~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~P~~~~~~~ 77 (101)
T TIGR01068 2 TDANFDETIAS--SDKPVLVDFWAPWCGPCKMIAPILEELAKEYEGK-VKFVKLNVDENPDIAAKYGIRS-IPTLLLFKN 77 (101)
T ss_pred CHHHHHHHHhh--cCCcEEEEEECCCCHHHHHhCHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCc-CCEEEEEeC
Confidence 55677776643 3679999999999999999999999999998765 9999999999999999999997 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+......|..+.+.|.+|+++.+
T Consensus 78 g~~~~~~~g~~~~~~l~~~l~~~~ 101 (101)
T TIGR01068 78 GKEVDRSVGALPKAALKQLINKNL 101 (101)
T ss_pred CcEeeeecCCCCHHHHHHHHHhhC
Confidence 987777778899999999998653
No 105
>KOG0595|consensus
Probab=99.34 E-value=2.3e-12 Score=149.77 Aligned_cols=134 Identities=22% Similarity=0.233 Sum_probs=85.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||+||+|.||+|+++ +|..||||-..-. .+..+..+.+..|+-.
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~~-----------------------------~l~~k~~e~L~~Ei~i---- 62 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAKK-----------------------------KLNKKLVELLLSEIKI---- 62 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehhh-----------------------------ccCHHHHHHHHHHHHH----
Confidence 33999999999999976 7899999954211 1112223334344333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHH---HHHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA---FAEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~---~l~~i~~~G~vH~ 564 (1578)
++.+. |...|.+-.+.+. .+.-+|||||++|+.|+++. ...+.-++..++...+. .++.++..++|||
T Consensus 63 --Lkel~----H~nIV~l~d~~~~-~~~i~lVMEyC~gGDLs~yi--~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHR 133 (429)
T KOG0595|consen 63 --LKELK----HPNIVRLLDCIED-DDFIYLVMEYCNGGDLSDYI--RRRGRLPEATARHFMQQLASALQFLHENNIIHR 133 (429)
T ss_pred --HHhcC----CcceeeEEEEEec-CCeEEEEEEeCCCCCHHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 33322 3334555555532 33457999999999999984 44433334444433322 2788999999999
Q ss_pred CCCCCCCCCCe---------eEEecCCch
Q psy12972 565 DPHSGNDVNTW---------LYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~~---------v~liDfG~~ 584 (1578)
|+||.|||+.. +++-|||.+
T Consensus 134 DLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 134 DLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred cCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999642 456666654
No 106
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.33 E-value=7.5e-13 Score=166.56 Aligned_cols=71 Identities=32% Similarity=0.550 Sum_probs=67.4
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
...++|++|||+++||..+||+|||+||++||||+++++.|..+|++|++||++|+||.+|+.||.+|..+
T Consensus 571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~G 641 (1136)
T PTZ00341 571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDG 641 (1136)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccc
Confidence 46799999999999999999999999999999999987788899999999999999999999999998875
No 107
>KOG0715|consensus
Probab=99.32 E-value=1.2e-12 Score=152.15 Aligned_cols=72 Identities=43% Similarity=0.808 Sum_probs=67.8
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
....|||++|||+++|+..|||+||++|+++||||.++++++.++|++|.+|||+|+|+++|..||.++..+
T Consensus 40 ~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~ 111 (288)
T KOG0715|consen 40 ISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQ 111 (288)
T ss_pred CCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhc
Confidence 334499999999999999999999999999999999999999999999999999999999999999988764
No 108
>cd02961 PDI_a_family Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI and PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5, PDIR, ERp46 and the transmembrane PDIs. PDI, ERp57, ERp72, P5, PDIR and ERp46 are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins usually contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and may also contain one or more redox inactive TRX-like (b) domains. Only one a domain is required for the oxidase function but multiple copies
Probab=99.32 E-value=2.2e-12 Score=125.83 Aligned_cols=98 Identities=28% Similarity=0.457 Sum_probs=84.8
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC-CCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS-PLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~-~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
+++.++|.+.+. ..++++|.||++||++|+.+.|.|.++++.++ +.++.++.|||+.+..+|++|+|.+ +||+++
T Consensus 2 ~l~~~~~~~~i~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~-~Pt~~~ 77 (101)
T cd02961 2 ELTDDNFDELVK---DSKDVLVEFYAPWCGHCKALAPEYEKLAKELKGDGKVVVAKVDCTANNDLCSEYGVRG-YPTIKL 77 (101)
T ss_pred cccHHHHHHHHh---CCCcEEEEEECCCCHHHHhhhHHHHHHHHHhccCCceEEEEeeccchHHHHHhCCCCC-CCEEEE
Confidence 477888888773 34499999999999999999999999999995 3349999999999999999999997 999999
Q ss_pred EcCC-ccccccCCCCCHHHHHHHH
Q psy12972 936 LTDG-RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 936 f~~G-~~~~y~~G~~s~~~L~~fi 958 (1578)
|.+| .....+.|..+.++|.+|+
T Consensus 78 ~~~~~~~~~~~~g~~~~~~i~~~~ 101 (101)
T cd02961 78 FPNGSKEPVKYEGPRTLESLVEFI 101 (101)
T ss_pred EcCCCcccccCCCCcCHHHHHhhC
Confidence 9887 5556666888999998874
No 109
>cd02965 HyaE HyaE family; HyaE is also called HupG and HoxO. They are proteins serving a critical role in the assembly of multimeric [NiFe] hydrogenases, the enzymes that catalyze the oxidation of molecular hydrogen to enable microorganisms to utilize hydrogen as the sole energy source. The E. coli HyaE protein is a chaperone that specifically interacts with the twin-arginine translocation (Tat) signal peptide of the [NiFe] hydrogenase-1 beta subunit precursor. Tat signal peptides target precursor proteins to the Tat protein export system, which facilitates the transport of fully folded proteins across the inner membrane. HyaE may be involved in regulating the traffic of [NiFe] hydrogenase-1 on the Tat transport pathway.
Probab=99.32 E-value=3.2e-12 Score=126.96 Aligned_cols=94 Identities=19% Similarity=0.173 Sum_probs=85.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++..||++.+ +.+++.+|.||++| |++|..+.|.++++|+++.+. +.|++||++.+++++.+|+|.+ .||++
T Consensus 14 ~~~~~~~~~~~---~~~~~~v~~f~~~~~~cp~c~~i~P~leela~e~~~~-v~f~kVdid~~~~la~~f~V~s-IPTli 88 (111)
T cd02965 14 RVDAATLDDWL---AAGGDLVLLLAGDPVRFPEVLDVAVVLPELLKAFPGR-FRAAVVGRADEQALAARFGVLR-TPALL 88 (111)
T ss_pred ccccccHHHHH---hCCCCEEEEecCCcccCcchhhhHhHHHHHHHHCCCc-EEEEEEECCCCHHHHHHcCCCc-CCEEE
Confidence 57889999776 55899999999997 999999999999999999876 8999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHH
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
+|++|+......|..+.+++.
T Consensus 89 ~fkdGk~v~~~~G~~~~~e~~ 109 (111)
T cd02965 89 FFRDGRYVGVLAGIRDWDEYV 109 (111)
T ss_pred EEECCEEEEEEeCccCHHHHh
Confidence 999999887777888877664
No 110
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.32 E-value=1.9e-12 Score=157.89 Aligned_cols=70 Identities=47% Similarity=0.869 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
..|+|++|||+++||.+|||+|||+||++||||+++ ++.++++|++|++||++|+||.+|+.||.+|..+
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~ 74 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAG 74 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccc
Confidence 479999999999999999999999999999999997 4678999999999999999999999999998753
No 111
>cd02985 TRX_CDSP32 TRX family, chloroplastic drought-induced stress protein of 32 kD (CDSP32); CDSP32 is composed of two TRX domains, a C-terminal TRX domain which contains a redox active CXXC motif and an N-terminal TRX-like domain which contains an SXXS sequence instead of the redox active motif. CDSP32 is a stress-inducible TRX, i.e., it acts as a TRX by reducing protein disulfides and is induced by environmental and oxidative stress conditions. It plays a critical role in plastid defense against oxidative damage, a role related to its function as a physiological electron donor to BAS1, a plastidic 2-cys peroxiredoxin. Plants lacking CDSP32 exhibit decreased photosystem II photochemical efficiencies and chlorophyll retention compared to WT controls, as well as an increased proportion of BAS1 in its overoxidized monomeric form.
Probab=99.31 E-value=2.8e-12 Score=127.42 Aligned_cols=96 Identities=15% Similarity=0.174 Sum_probs=80.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch---hhHhHcCccccCCcEEE
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ---GLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~---~L~~k~gV~~~~PTl~l 935 (1578)
|.++|++.+.+ ..+++++|.|||+||++|+.+.|.++++++.+. ++.|++||++++. +++++|+|++ +||+++
T Consensus 2 ~~~~~~~~i~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~d~~~~~~~l~~~~~V~~-~Pt~~~ 77 (103)
T cd02985 2 SVEELDEALKK-AKGRLVVLEFALKHSGPSVKIYPTMVKLSRTCN--DVVFLLVNGDENDSTMELCRREKIIE-VPHFLF 77 (103)
T ss_pred CHHHHHHHHHH-cCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CCEEEEEECCCChHHHHHHHHcCCCc-CCEEEE
Confidence 34567776643 347899999999999999999999999999993 3899999998874 8999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHH
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|++|+....+.| ...++|.+-+.
T Consensus 78 ~~~G~~v~~~~G-~~~~~l~~~~~ 100 (103)
T cd02985 78 YKDGEKIHEEEG-IGPDELIGDVL 100 (103)
T ss_pred EeCCeEEEEEeC-CCHHHHHHHHH
Confidence 999998877767 55677776654
No 112
>KOG0574|consensus
Probab=99.31 E-value=5.6e-13 Score=147.52 Aligned_cols=139 Identities=19% Similarity=0.236 Sum_probs=107.3
Q ss_pred HHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCH
Q psy12972 388 DQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDF 466 (1578)
Q Consensus 388 ~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~ 466 (1578)
.++=+..|.++++|+|.-.+ -+|.||+|.||+|..+ +|+.||||-.. + ..|+
T Consensus 20 ~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V-------------------~sDL 72 (502)
T KOG0574|consen 20 FKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------V-------------------DTDL 72 (502)
T ss_pred cccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------c-------------------cchH
Confidence 34446788999999999984 5999999999999976 79999999432 2 2344
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 467 QWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 467 ~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
+.++.|++ + ++++. .-+|-+.|..| .|+-++||||+-..+++|+..+++..++..++
T Consensus 73 QEIIKEIS--I------------MQQC~-------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EI 131 (502)
T KOG0574|consen 73 QEIIKEIS--I------------MQQCK-------SKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEI 131 (502)
T ss_pred HHHHHHHH--H------------HHHcC-------CchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHH
Confidence 55555543 2 22221 22344555544 35678999999999999999999899999999
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT 574 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~ 574 (1578)
+..+-..+ ++.+|...-+|||++.||||+.
T Consensus 132 s~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN 163 (502)
T KOG0574|consen 132 SAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN 163 (502)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhhcccccEEEc
Confidence 99888887 8999999999999999999954
No 113
>KOG0691|consensus
Probab=99.30 E-value=1.5e-12 Score=149.53 Aligned_cols=71 Identities=44% Similarity=0.771 Sum_probs=67.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
..|||.+|||+.++|.++|++|||+.+++||||||| +|.|.++|+.+.+||++|+|+..|..||.++..+-
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~ 75 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS 75 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc
Confidence 679999999999999999999999999999999998 69999999999999999999999999999988753
No 114
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.30 E-value=1.3e-11 Score=137.25 Aligned_cols=150 Identities=17% Similarity=0.166 Sum_probs=96.5
Q ss_pred CcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.++|+.|++|+||+|..++|+.||||+.+++..... ......+... .. ..... .-..+.++..|.
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~-----~~~~~~~~~~---~~-~~~~~------~~~~~~~~~~E~ 84 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFR-----KVKRKRDYLG---DR-KHASW------LYLSRLAAQKEF 84 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhh-----hhcchHHHHh---cc-ccchh------HHHhHHHHHHHH
Confidence 378999999999999998999999999877542110 0000000000 00 00000 112233566777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPH 567 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpH 567 (1578)
..+..+... .+.+|.++. ....+|||||++|.++.++.. ......++..++.. +..+|..|++|+|+|
T Consensus 85 ~~l~~l~~~-----~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~----~~~~~~~~~~i~~~-l~~lh~~gi~H~Dl~ 152 (198)
T cd05144 85 AALKALYEE-----GFPVPKPID--WNRHAVVMEYIDGVELYRVRV----LEDPEEVLDEILEE-IVKAYKHGIIHGDLS 152 (198)
T ss_pred HHHHHHHHc-----CCCCCceee--cCCceEEEEEeCCcchhhccc----cccHHHHHHHHHHH-HHHHHHCCCCcCCCC
Confidence 777777542 356788875 356799999999999877532 12345566666554 467899999999999
Q ss_pred CCCCCCC---eeEEecCCch
Q psy12972 568 SGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~ 584 (1578)
|+||++. .++++|||..
T Consensus 153 p~Nill~~~~~~~liDfg~~ 172 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQM 172 (198)
T ss_pred cccEEEcCCCcEEEEECCcc
Confidence 9999964 3566666643
No 115
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=99.29 E-value=3e-12 Score=129.47 Aligned_cols=89 Identities=15% Similarity=0.173 Sum_probs=78.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.++|.++|.+.+...+.+++++|.||+|||++|+.+.|.++++|+.+.+ +.|++||++++ .++++|+|.+ +||++
T Consensus 6 v~~i~~~~f~~~i~~~~~~~~vvv~F~a~~c~~C~~l~~~l~~la~~~~~--v~f~~vd~~~~-~l~~~~~i~~-~Pt~~ 81 (113)
T cd02957 6 VREISSKEFLEEVTKASKGTRVVVHFYEPGFPRCKILDSHLEELAAKYPE--TKFVKINAEKA-FLVNYLDIKV-LPTLL 81 (113)
T ss_pred EEEEcHHHHHHHHHccCCCCEEEEEEeCCCCCcHHHHHHHHHHHHHHCCC--cEEEEEEchhh-HHHHhcCCCc-CCEEE
Confidence 45688899999886554458999999999999999999999999999864 79999999998 9999999997 99999
Q ss_pred EEcCCccccccCC
Q psy12972 935 LLTDGRTSFFKEP 947 (1578)
Q Consensus 935 lf~~G~~~~y~~G 947 (1578)
+|++|+.+....|
T Consensus 82 ~f~~G~~v~~~~G 94 (113)
T cd02957 82 VYKNGELIDNIVG 94 (113)
T ss_pred EEECCEEEEEEec
Confidence 9999987765545
No 116
>cd02962 TMX2 TMX2 family; composed of proteins similar to human TMX2, a 372-amino acid TRX-related transmembrane protein, identified and characterized through the cloning of its cDNA from a human fetal library. It contains a TRX domain but the redox active CXXC motif is replaced with SXXC. Sequence analysis predicts that TMX2 may be a Type I membrane protein, with its C-terminal half protruding on the luminal side of the endoplasmic reticulum (ER). In addition to the TRX domain, transmembrane region and ER-retention signal, TMX2 also contains a Myb DNA-binding domain repeat signature and a dileucine motif in the tail.
Probab=99.29 E-value=3.7e-12 Score=134.75 Aligned_cols=92 Identities=20% Similarity=0.339 Sum_probs=79.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc-----c
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-----Q 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~-----~ 929 (1578)
+.+++.++|++.+.. +.+++++|.||+|||++|+.+.|.|+++++.+.+.++.|++|||++++++|++|+|++ +
T Consensus 30 v~~l~~~~f~~~l~~-~~~~~vvV~Fya~wC~~Ck~l~p~l~~la~~~~~~~v~f~~VDvd~~~~la~~~~V~~~~~v~~ 108 (152)
T cd02962 30 IKYFTPKTLEEELER-DKRVTWLVEFFTTWSPECVNFAPVFAELSLKYNNNNLKFGKIDIGRFPNVAEKFRVSTSPLSKQ 108 (152)
T ss_pred cEEcCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCeEEEEEECCCCHHHHHHcCceecCCcCC
Confidence 456888999986643 3467999999999999999999999999999976569999999999999999999972 1
Q ss_pred CCcEEEEcCCccccccCC
Q psy12972 930 LPQIALLTDGRTSFFKEP 947 (1578)
Q Consensus 930 ~PTl~lf~~G~~~~y~~G 947 (1578)
+||+++|++|+.+....|
T Consensus 109 ~PT~ilf~~Gk~v~r~~G 126 (152)
T cd02962 109 LPTIILFQGGKEVARRPY 126 (152)
T ss_pred CCEEEEEECCEEEEEEec
Confidence 899999999997765554
No 117
>KOG1731|consensus
Probab=99.28 E-value=4.5e-12 Score=152.23 Aligned_cols=222 Identities=16% Similarity=0.248 Sum_probs=131.4
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECc--cchhhHhHcCcccc
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVH--NEQGLARRLGVGSQ 929 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~--~~~~L~~k~gV~~~ 929 (1578)
.+++|+.++|...|..+ .+.++|+||++|||||.+++|.|+++|+.+++.. +.++.|||. .|..+|++|+|++
T Consensus 40 ~ii~Ld~~tf~~~v~~~--~~~~lVEFy~swCGhCr~FAPtfk~~A~dl~~W~~vv~vaaVdCA~~~N~~lCRef~V~~- 116 (606)
T KOG1731|consen 40 PIIELDVDTFNAAVFGS--RKAKLVEFYNSWCGHCRAFAPTFKKFAKDLEKWRPVVRVAAVDCADEENVKLCREFSVSG- 116 (606)
T ss_pred CeEEeehhhhHHHhccc--chhHHHHHHHhhhhhhhhcchHHHHHHHHHhcccceeEEEEeeccchhhhhhHhhcCCCC-
Confidence 36789999999999765 4789999999999999999999999999998765 899999996 4678999999998
Q ss_pred CCcEEEEcCCccc----cccCCCCCHHHHHHHHHhhC---------C--CccccccccccHHHHhhcccCCCcEEEEEec
Q psy12972 930 LPQIALLTDGRTS----FFKEPSFSVQKMVEFFRLKL---------P--YKLIVPLSATNVDAFLDNWREDNKVHALLFQ 994 (1578)
Q Consensus 930 ~PTl~lf~~G~~~----~y~~G~~s~~~L~~fi~~~l---------p--~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~ 994 (1578)
||||.+|+.+... ....|.....++.+.+.+.+ | |..-.......+.+.-++-.+....+.++|.
T Consensus 117 ~Ptlryf~~~~~~~~~G~~~~~~~~~~ei~~~l~~~la~~~~~~~~~~WP~f~pl~~~~~~~~l~~~~~~~~~yvAiv~e 196 (606)
T KOG1731|consen 117 YPTLRYFPPDSQNKTDGSDVSGPVIPSEIRDQLIRTLAEEDAQNRYPSWPNFDPLKDTTTLEELDEGISTTANYVAIVFE 196 (606)
T ss_pred CceeeecCCccccCcCCCcccCCcchhhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcchHHHHhcccccccceeEEEEe
Confidence 9999999654221 22235455666766665443 1 1111111222233222221011335566664
Q ss_pred cCCc-hHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccc-cCCCCchhhhhhhhc
Q psy12972 995 RSLP-VRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASIT-MNSIPVPTLQDITDN 1072 (1578)
Q Consensus 995 ~~~~-~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~-~~~l~~~~L~~fI~~ 1072 (1578)
..+. ..+..++....+ ..+....+.. .+.-.+++ +++ .+.|..++|+.+...+....+ ..+.....|.+++..
T Consensus 197 ~~~s~lg~~~~l~~l~~-~~v~vr~~~d--~q~~~~~~-l~~-~~~~~~llfrnG~~q~l~~~~~s~~~y~~~I~~~lg~ 271 (606)
T KOG1731|consen 197 TEPSDLGWANLLNDLPS-KQVGVRARLD--TQNFPLFG-LKP-DNFPLALLFRNGEQQPLWPSSSSRSAYVKKIDDLLGD 271 (606)
T ss_pred cCCcccHHHHHHhhccC-CCcceEEEec--chhccccc-cCC-CCchhhhhhcCCcccccccccccHHHHHHHHHHHhcC
Confidence 4333 333333333322 3333334411 12222222 333 346788889776665443221 111223456666654
Q ss_pred C---CCCCCcccCc
Q psy12972 1073 N---PYLTLPRISS 1083 (1578)
Q Consensus 1073 n---k~p~vpeLts 1083 (1578)
. ..|+++..+.
T Consensus 272 ~~~a~~pt~~p~~~ 285 (606)
T KOG1731|consen 272 KNEASGPTLHPITA 285 (606)
T ss_pred ccccCCCCcCcccc
Confidence 4 4566665553
No 118
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.27 E-value=2.3e-11 Score=136.08 Aligned_cols=138 Identities=17% Similarity=0.265 Sum_probs=98.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|+.|.||+|+. +|+.|+||+..|.....-..| . ......+.+|++
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~------------------------~-----~~~~~~~~~E~~ 51 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELD------------------------E-----RIRRERTRREAR 51 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHH------------------------H-----HHHHHHHHHHHH
Confidence 5789999999999986 888999999876432211111 0 011234577888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
++.++.. +.+.+|.++....+..+|+|||++|.+|.+.... .......++..+.. .+.++|..|++|+|+||
T Consensus 52 ~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~--~~~~~~~i~~~i~~-~l~~lH~~~i~H~Dl~p 123 (211)
T PRK14879 52 IMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINS--NGMEELELSREIGR-LVGKLHSAGIIHGDLTT 123 (211)
T ss_pred HHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHh--ccHHHHHHHHHHHH-HHHHHHhCCcccCCCCc
Confidence 8887753 3578888886666788999999999999887431 11122344444443 37789999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
+|||+. .++++|||..
T Consensus 124 ~Nil~~~~~~~liDf~~a 141 (211)
T PRK14879 124 SNMILSGGKIYLIDFGLA 141 (211)
T ss_pred ccEEEECCCEEEEECCcc
Confidence 999963 4777888754
No 119
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=3e-11 Score=133.10 Aligned_cols=150 Identities=18% Similarity=0.174 Sum_probs=101.6
Q ss_pred cccccccceEEEEEEecC-------CCEEEEEEecchhhhhHHHHHHHHHHHHHHH--h-hh---CCCCCHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------GVEVAVKVQYIDLRERFVGDIATVQTLLRIA--G-FL---YPKFDFQWVINELKV 475 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~--~-~~---~~~~~~~~~~~e~~~ 475 (1578)
-+|++|--|-||.|.-.+ |..|||||-+...... +. ..+.+ . ++ ..+.+...++..+.
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F-k~-------~~~y~~~~~rf~~~~~k~~~~~~~~~wa- 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF-KN-------RDKYIKDDYRFKDRFSKLNPRKIIRMWA- 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE-cC-------hhhhccCCcccccCcCCCCHHHHHHHHH-
Confidence 479999999999998653 5899999999765432 11 11111 0 01 01134455555554
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCH---HHHHHHHHHHH
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSL---ADVDRKLFTAF 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~---~~v~~~l~~~~ 552 (1578)
+.|++|+.++++. ++.||+|+. ..+++|||||+.|..+... .+.+...+. ..+...++..+
T Consensus 74 --------~kE~r~L~rl~~~-----Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 74 --------EKEMHNLKRMQKA-----GIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred --------HHHHHHHHHHHHc-----CCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHHH
Confidence 7899999999864 588999994 5899999999987433211 122222332 34455666666
Q ss_pred HHHHHHcCccccCCCCCCCCC--CeeEEecCCc
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN--TWLYPVDLGD 583 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv--~~v~liDfG~ 583 (1578)
..++|..|++|+||+|.|||+ +.+++||||-
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~~~~v~iIDF~q 170 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWHDGKVWFIDVSQ 170 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEECCcEEEEECCC
Confidence 666799999999999999996 4688888883
No 120
>KOG0718|consensus
Probab=99.25 E-value=4.6e-12 Score=147.70 Aligned_cols=72 Identities=40% Similarity=0.745 Sum_probs=66.6
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGF 707 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~ 707 (1578)
..|+|.+|+++++||.+|||+|||++++.+||||..+| .|+++|+.|.+|||+|+||.+|+.||.+|..+..
T Consensus 8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 34899999999999999999999999999999998653 5889999999999999999999999999998764
No 121
>cd02992 PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QSOX) subfamily; QSOX is a eukaryotic protein containing an N-terminal redox active TRX domain, similar to that of PDI, and a small C-terminal flavin adenine dinucleotide (FAD)-binding domain homologous to the yeast ERV1p protein. QSOX oxidizes thiol groups to disulfides like PDI, however, unlike PDI, this oxidation is accompanied by the reduction of oxygen to hydrogen peroxide. QSOX is localized in high concentrations in cells with heavy secretory load and prefers peptides and proteins as substrates, not monothiols like glutathione. Inside the cell, QSOX is found in the endoplasmic reticulum and Golgi. The flow of reducing equivalents in a QSOX-catalyzed reaction goes from the dithiol substrate - dithiol of the QSOX TRX domain - dithiols of the QSOX ERV1p domain - FAD - oxygen.
Probab=99.24 E-value=1.5e-11 Score=124.56 Aligned_cols=84 Identities=23% Similarity=0.433 Sum_probs=73.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECcc--chhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHN--EQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~--~~~L~~k~gV~~~~ 930 (1578)
+++++.++|++.+... +++++|.||++||++|+.+.|.|+++++.+++. .+.++.|||+. ++++|++|+|++ +
T Consensus 3 v~~l~~~~f~~~i~~~--~~~vvV~f~a~wC~~C~~~~~~~~~la~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i~~-~ 79 (114)
T cd02992 3 VIVLDAASFNSALLGS--PSAWLVEFYASWCGHCRAFAPTWKKLARDLRKWRPVVRVAAVDCADEENVALCRDFGVTG-Y 79 (114)
T ss_pred eEECCHHhHHHHHhcC--CCeEEEEEECCCCHHHHHHhHHHHHHHHHHHhcCCceEEEEEeccchhhHHHHHhCCCCC-C
Confidence 4678999999988644 579999999999999999999999999998642 28999999964 678999999997 9
Q ss_pred CcEEEEcCCcc
Q psy12972 931 PQIALLTDGRT 941 (1578)
Q Consensus 931 PTl~lf~~G~~ 941 (1578)
||+++|++|..
T Consensus 80 Pt~~lf~~~~~ 90 (114)
T cd02992 80 PTLRYFPPFSK 90 (114)
T ss_pred CEEEEECCCCc
Confidence 99999988863
No 122
>cd02984 TRX_PICOT TRX domain, PICOT (for PKC-interacting cousin of TRX) subfamily; PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT contains an N-terminal TRX-like domain, which does not contain the catalytic CXXC motif, followed by one to three glutaredoxin domains. The TRX-like domain is required for interaction with PKC theta. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli.
Probab=99.21 E-value=1.8e-11 Score=119.78 Aligned_cols=95 Identities=15% Similarity=0.349 Sum_probs=79.8
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
.++|++.+.... +++++|.||++||++|+.+.|.++++++.+.. .+.++++|++++++++++|+|.+ +||+++|++|
T Consensus 2 ~~~~~~~~~~~~-~~~v~v~f~~~~C~~C~~~~~~l~~l~~~~~~-~i~~~~vd~~~~~~~~~~~~i~~-~Pt~~~~~~g 78 (97)
T cd02984 2 EEEFEELLKSDA-SKLLVLHFWAPWAEPCKQMNQVFEELAKEAFP-SVLFLSIEAEELPEISEKFEITA-VPTFVFFRNG 78 (97)
T ss_pred HHHHHHHHhhCC-CCEEEEEEECCCCHHHHHHhHHHHHHHHHhCC-ceEEEEEccccCHHHHHhcCCcc-ccEEEEEECC
Confidence 456666554332 68999999999999999999999999999743 49999999999999999999998 9999999999
Q ss_pred ccccccCCCCCHHHHHHHH
Q psy12972 940 RTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 940 ~~~~y~~G~~s~~~L~~fi 958 (1578)
+......| .+.++|.+.|
T Consensus 79 ~~~~~~~g-~~~~~l~~~~ 96 (97)
T cd02984 79 TIVDRVSG-ADPKELAKKV 96 (97)
T ss_pred EEEEEEeC-CCHHHHHHhh
Confidence 88776656 5667777654
No 123
>KOG0907|consensus
Probab=99.20 E-value=3.6e-11 Score=119.44 Aligned_cols=85 Identities=20% Similarity=0.389 Sum_probs=74.9
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSV 951 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~ 951 (1578)
.+++++|.|||+|||+|+.+.|.+.++|.++.+ +.|.+||+++..++|++++|+. .||+++|++|+......|. +.
T Consensus 20 ~~kliVvdF~a~wCgPCk~i~P~~~~La~~y~~--v~Flkvdvde~~~~~~~~~V~~-~PTf~f~k~g~~~~~~vGa-~~ 95 (106)
T KOG0907|consen 20 GDKLVVVDFYATWCGPCKAIAPKFEKLAEKYPD--VVFLKVDVDELEEVAKEFNVKA-MPTFVFYKGGEEVDEVVGA-NK 95 (106)
T ss_pred CCCeEEEEEECCCCcchhhhhhHHHHHHHHCCC--CEEEEEecccCHhHHHhcCceE-eeEEEEEECCEEEEEEecC-CH
Confidence 368999999999999999999999999999986 8999999999999999999998 9999999999987766663 44
Q ss_pred HHHHHHHHh
Q psy12972 952 QKMVEFFRL 960 (1578)
Q Consensus 952 ~~L~~fi~~ 960 (1578)
+.+.+.+.+
T Consensus 96 ~~l~~~i~~ 104 (106)
T KOG0907|consen 96 AELEKKIAK 104 (106)
T ss_pred HHHHHHHHh
Confidence 577666643
No 124
>PLN00410 U5 snRNP protein, DIM1 family; Provisional
Probab=99.20 E-value=2.8e-11 Score=125.71 Aligned_cols=100 Identities=9% Similarity=0.231 Sum_probs=80.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE-EEc
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA-LLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~-lf~ 937 (1578)
+..+|++.+... .+++++|.|||+||++|+.+.|.++++|+++.+. +.|++||++++++++++|+|.+ .||++ +|+
T Consensus 10 s~~e~d~~I~~~-~~~lVVvdF~A~WCgpCk~m~p~l~~la~~~~~~-~~~~kVDVDe~~dla~~y~I~~-~~t~~~ffk 86 (142)
T PLN00410 10 SGWAVDQAILAE-EERLVVIRFGHDWDETCMQMDEVLASVAETIKNF-AVIYLVDITEVPDFNTMYELYD-PCTVMFFFR 86 (142)
T ss_pred CHHHHHHHHHhc-CCCEEEEEEECCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCCCHHHHHHcCccC-CCcEEEEEE
Confidence 456677766533 5789999999999999999999999999999876 8899999999999999999996 77766 889
Q ss_pred CCc-cccccCC--------CCCHHHHHHHHHhh
Q psy12972 938 DGR-TSFFKEP--------SFSVQKMVEFFRLK 961 (1578)
Q Consensus 938 ~G~-~~~y~~G--------~~s~~~L~~fi~~~ 961 (1578)
+|+ .+.+..| ..+.++|++-+...
T Consensus 87 ~g~~~vd~~tG~~~k~~~~~~~k~~l~~~i~~~ 119 (142)
T PLN00410 87 NKHIMIDLGTGNNNKINWALKDKQEFIDIVETV 119 (142)
T ss_pred CCeEEEEEecccccccccccCCHHHHHHHHHHH
Confidence 998 5555556 45556666555433
No 125
>cd02953 DsbDgamma DsbD gamma family; DsbD gamma is the C-terminal periplasmic domain of the bacterial protein DsbD. It contains a CXXC motif in a TRX fold and shuttles the reducing potential from the membrane domain (DsbD beta) to the N-terminal periplasmic domain (DsbD alpha). DsbD beta, a transmembrane domain comprising of eight helices, acquires its reducing potential from the cytoplasmic thioredoxin. DsbD alpha transfers the acquired reducing potential from DsbD gamma to target proteins such as the periplasmic protein disulphide isomerases, DsbC and DsbG. This flow of reducing potential from the cytoplasm through DsbD allows DsbC and DsbG to act as isomerases in the oxidizing environment of the bacterial periplasm. DsbD also transfers reducing potential from the cytoplasm to specific reductases in the periplasm which are involved in the maturation of cytochromes.
Probab=99.19 E-value=2.3e-11 Score=120.95 Aligned_cols=87 Identities=17% Similarity=0.324 Sum_probs=76.7
Q ss_pred CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECcc----chhhHhHcCccccCCcEEEEc--CCcc
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHN----EQGLARRLGVGSQLPQIALLT--DGRT 941 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~----~~~L~~k~gV~~~~PTl~lf~--~G~~ 941 (1578)
+.+++++|.||++||++|+.+.|.+ .++++.+.+ ++.++.||+++ ..+++++|+|.+ +||+++|. +|+.
T Consensus 9 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~~~~~i~~-~Pti~~~~~~~g~~ 86 (104)
T cd02953 9 AQGKPVFVDFTADWCVTCKVNEKVVFSDPEVQAALKK-DVVLLRADWTKNDPEITALLKRFGVFG-PPTYLFYGPGGEPE 86 (104)
T ss_pred HcCCeEEEEEEcchhHHHHHHHHHhcCCHHHHHHHhC-CeEEEEEecCCCCHHHHHHHHHcCCCC-CCEEEEECCCCCCC
Confidence 4578999999999999999999988 688888876 59999999987 578999999998 99999998 6887
Q ss_pred ccccCCCCCHHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~ 959 (1578)
.....|..+.++|.++++
T Consensus 87 ~~~~~G~~~~~~l~~~l~ 104 (104)
T cd02953 87 PLRLPGFLTADEFLEALE 104 (104)
T ss_pred CcccccccCHHHHHHHhC
Confidence 777789999999988863
No 126
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.19 E-value=1.7e-10 Score=128.56 Aligned_cols=152 Identities=20% Similarity=0.137 Sum_probs=105.8
Q ss_pred ccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhh-CCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFL-YPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~-~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+|.+|--|-||+|...+|+.|||||++.........+ ....--.++ ....+...++..|. +.|.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~-----~Yi~gd~Rf~~~~~~rr~lv~~W~---------~kEf~ 120 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIR-----RYIQGDPRFRNSRSNRRKLVFAWA---------RKEFR 120 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHH-----HHHhcChhhhcCCCCHHHHHHHHH---------HHHHH
Confidence 8999999999999999999999999998765432211 111000011 01236666777776 78999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCC---HHHHHHHHHHHHHHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFS---LADVDRKLFTAFAEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~---~~~v~~~l~~~~l~~i~~~G~vH~D 565 (1578)
|+.|+.+. +|.||+|+ ..-++|||||||... -.-...+...++. ...+...+++-+-.|....|+||+|
T Consensus 121 NL~R~~eA-----GVrvP~Pi--~~~~nVLvMEfIg~~-g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgD 192 (268)
T COG1718 121 NLKRAYEA-----GVRVPEPI--AFRNNVLVMEFIGDD-GLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGD 192 (268)
T ss_pred HHHHHHHc-----CCCCCCce--eecCCeEEEEeccCC-CCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCccccc
Confidence 99999864 59999999 566899999999322 2111223333333 3445555666556666679999999
Q ss_pred CCCCCCCCC--eeEEecCCc
Q psy12972 566 PHSGNDVNT--WLYPVDLGD 583 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~ 583 (1578)
+..-|||+. .+++||+|-
T Consensus 193 LSEyNiL~~~~~p~iID~~Q 212 (268)
T COG1718 193 LSEYNILVHDGEPYIIDVSQ 212 (268)
T ss_pred chhhheEEECCeEEEEECcc
Confidence 999999965 689999983
No 127
>KOG0661|consensus
Probab=99.18 E-value=2.3e-11 Score=143.41 Aligned_cols=139 Identities=19% Similarity=0.274 Sum_probs=98.5
Q ss_pred ccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-||.|++|.||+|+- .+|..||||-.+ ..+.. + +|+-=.+|.+
T Consensus 17 klGDGTfGsV~la~~~~~~~~VAIK~MK---------------------~Kf~s---~------------ee~~nLREvk 60 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKETGELVAIKKMK---------------------KKFYS---W------------EECMNLREVK 60 (538)
T ss_pred HhcCCcceeEEEeeecCCCceeeHHHHH---------------------hhhcc---H------------HHHHHHHHHH
Confidence 479999999999995 489999999321 11110 1 1222245555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. .|...|.+=+|+.+--..-.+||||++ ..|..+..-++.-++...+-..+.+++ +..||++||||||+
T Consensus 61 sL~kln---~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDl 136 (538)
T KOG0661|consen 61 SLRKLN---PHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDL 136 (538)
T ss_pred HHHhcC---CCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence 555543 233345556666655445579999994 577777655556677788888888888 89999999999999
Q ss_pred CCCCCCCC---eeEEecCCchhhhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~l~ 588 (1578)
||.|||+. -+++-|||.++.+.
T Consensus 137 KPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 137 KPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred ChhheEecccceeEecccccccccc
Confidence 99999987 38999999886653
No 128
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=99.18 E-value=3.3e-11 Score=121.87 Aligned_cols=85 Identities=18% Similarity=0.241 Sum_probs=74.0
Q ss_pred eecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.++. ++|.+.+ +.+++++|.||+|||++|+.+.|.++++++.+.+ +.|++||++++++++++|+|.+ .||+++
T Consensus 8 ~i~~~~~~~~~i---~~~~~vvV~f~a~~c~~C~~~~p~l~~la~~~~~--i~f~~Vd~~~~~~l~~~~~v~~-vPt~l~ 81 (113)
T cd02989 8 EVSDEKEFFEIV---KSSERVVCHFYHPEFFRCKIMDKHLEILAKKHLE--TKFIKVNAEKAPFLVEKLNIKV-LPTVIL 81 (113)
T ss_pred EeCCHHHHHHHH---hCCCcEEEEEECCCCccHHHHHHHHHHHHHHcCC--CEEEEEEcccCHHHHHHCCCcc-CCEEEE
Confidence 4555 7888877 4468999999999999999999999999998864 8999999999999999999997 999999
Q ss_pred EcCCccccccCC
Q psy12972 936 LTDGRTSFFKEP 947 (1578)
Q Consensus 936 f~~G~~~~y~~G 947 (1578)
|++|+.+....|
T Consensus 82 fk~G~~v~~~~g 93 (113)
T cd02989 82 FKNGKTVDRIVG 93 (113)
T ss_pred EECCEEEEEEEC
Confidence 999986644433
No 129
>PF13848 Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_B 3BOA_A 2B5E_A 1BJX_A 2K18_A 3UEM_A 3BJ5_A 2BJX_A 2R2J_A 2L4C_A ....
Probab=99.18 E-value=6.1e-10 Score=121.89 Aligned_cols=182 Identities=18% Similarity=0.307 Sum_probs=134.7
Q ss_pred eccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 993 FQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 993 F~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
|.+........+..++ .+++.+.|+.+ .+.++++++++.. |++++|+...+.+..+-.. .++...|..||.
T Consensus 1 F~~~~~~~~~~f~~~A~~~~~~~~F~~~-----~~~~~~~~~~~~~--p~i~~~k~~~~~~~~y~~~-~~~~~~l~~fI~ 72 (184)
T PF13848_consen 1 FPDKDSELFEIFEEAAEKLKGDYQFGVT-----FNEELAKKYGIKE--PTIVVYKKFDEKPVVYDGD-KFTPEELKKFIK 72 (184)
T ss_dssp ESTTTSHHHHHHHHHHHHHTTTSEEEEE-----E-HHHHHHCTCSS--SEEEEEECTTTSEEEESSS-TTSHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHhCcCCcEEEEE-----cHHHHHHHhCCCC--CcEEEeccCCCCceecccc-cCCHHHHHHHHH
Confidence 3445556666666555 67778999999 6888999999976 8999998754544443222 367889999999
Q ss_pred cCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCC
Q psy12972 1072 NNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPE 1150 (1578)
Q Consensus 1072 ~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~ 1150 (1578)
.+++|.++++|..++....-...+.+++++.. +....+.....++++|++ ++++ +.|+|+|++..+++++.|....
T Consensus 73 ~~~~P~v~~~t~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~--~~~~-~~f~~~d~~~~~~~~~~~~i~~ 149 (184)
T PF13848_consen 73 KNSFPLVPELTPENFEKLFSSPKPPVLILFDNKDNESTEAFKKELQDIAKK--FKGK-INFVYVDADDFPRLLKYFGIDE 149 (184)
T ss_dssp HHSSTSCEEESTTHHHHHHSTSSEEEEEEEETTTHHHHHHHHHHHHHHHHC--TTTT-SEEEEEETTTTHHHHHHTTTTT
T ss_pred HhccccccccchhhHHHHhcCCCceEEEEEEcCCchhHHHHHHHHHHHHHh--cCCe-EEEEEeehHHhHHHHHHcCCCC
Confidence 99999999999988776664222446666654 445667888899999999 8876 8999999998899999883332
Q ss_pred CCCccccceeEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhh
Q psy12972 1151 DSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRS 1199 (1578)
Q Consensus 1151 ~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ 1199 (1578)
.++|.+++.+..+.+|.++..+ ..|.+.|..||++
T Consensus 150 ------~~~P~~vi~~~~~~~~~~~~~~--------~~~~~~i~~Fl~d 184 (184)
T PF13848_consen 150 ------DDLPALVIFDSNKGKYYYLPEG--------EITPESIEKFLND 184 (184)
T ss_dssp ------SSSSEEEEEETTTSEEEE--SS--------CGCHHHHHHHHHH
T ss_pred ------ccCCEEEEEECCCCcEEcCCCC--------CCCHHHHHHHhcC
Confidence 5889999899777555544432 4688899999873
No 130
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.17 E-value=1.2e-10 Score=129.15 Aligned_cols=133 Identities=21% Similarity=0.219 Sum_probs=93.2
Q ss_pred cccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNA 490 (1578)
Q Consensus 411 lasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~ 490 (1578)
||.|++|.||+|. .+|++|+||+..+.....-..| + ......+.+|.+++
T Consensus 2 ig~G~~~~vy~~~-~~~~~~viK~~~~~~~~~~~~~---------------------~--------~~~~~~~~~E~~~l 51 (199)
T TIGR03724 2 IAKGAEAIIYLGD-FLGLKAVIKERVPKSYRHPELD---------------------E--------RIRRERTRNEARLL 51 (199)
T ss_pred CCCCceEEEEEee-cCCccEEEEEecCCcCcCchHH---------------------H--------HHHHHHHHHHHHHH
Confidence 7899999999998 5789999998665321110000 0 01112356788888
Q ss_pred HHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCCCC
Q psy12972 491 ERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHSGN 570 (1578)
Q Consensus 491 ~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHPGN 570 (1578)
.+++. ..+.+|.++.......+|||||++|.++.+... ..+ ..++..+... +..+|..|++|+|+||+|
T Consensus 52 ~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~--~~~---~~~~~~i~~~-l~~lH~~gi~H~Dl~~~N 120 (199)
T TIGR03724 52 SRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIE--EGN---DELLREIGRL-VGKLHKAGIVHGDLTTSN 120 (199)
T ss_pred HHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHh--hcH---HHHHHHHHHH-HHHHHHCCeecCCCCcce
Confidence 88764 347788888766677799999999999987632 111 1455554443 668999999999999999
Q ss_pred CCC--CeeEEecCCch
Q psy12972 571 DVN--TWLYPVDLGDK 584 (1578)
Q Consensus 571 ilv--~~v~liDfG~~ 584 (1578)
||+ +.++++|||..
T Consensus 121 il~~~~~~~liDfg~a 136 (199)
T TIGR03724 121 IIVRDDKLYLIDFGLG 136 (199)
T ss_pred EEEECCcEEEEECCCC
Confidence 996 35777887754
No 131
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.15 E-value=3e-11 Score=107.76 Aligned_cols=57 Identities=56% Similarity=0.948 Sum_probs=53.7
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC--ChhHHHHHHHHHHHHHHcCCHH
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN--DPTAQEKFLQLTEAYNILSDAE 693 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~a~~~f~~i~~Ay~~L~d~~ 693 (1578)
.|+|++|||+++++.++||++|+++++++|||+++ .+.+.+.|++|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5788999999999999999974
No 132
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.14 E-value=4.6e-11 Score=104.52 Aligned_cols=54 Identities=56% Similarity=0.976 Sum_probs=51.6
Q ss_pred CCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-hhHHHHHHHHHHHHHHcCC
Q psy12972 638 DPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-PTAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 638 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d 691 (1578)
|||++|||+++++.++||++|+++++++|||+++. +.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 68999999999999999999999999999999986 7789999999999999986
No 133
>KOG1731|consensus
Probab=99.14 E-value=3.3e-11 Score=144.89 Aligned_cols=192 Identities=18% Similarity=0.154 Sum_probs=119.3
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQD 819 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~ 819 (1578)
.+.++.-+|...+.+ +.+.+||+||++|||||++++|+|+++|+.+.+. .+.+++|.... +|+..++.++
T Consensus 41 ii~Ld~~tf~~~v~~--~~~~~lVEFy~swCGhCr~FAPtfk~~A~dl~~W~~vv~vaaVdCA~~~N~~lCRef~V~~~- 117 (606)
T KOG1731|consen 41 IIELDVDTFNAAVFG--SRKAKLVEFYNSWCGHCRAFAPTFKKFAKDLEKWRPVVRVAAVDCADEENVKLCREFSVSGY- 117 (606)
T ss_pred eEEeehhhhHHHhcc--cchhHHHHHHHhhhhhhhhcchHHHHHHHHHhcccceeEEEEeeccchhhhhhHhhcCCCCC-
Confidence 345666689999976 4488999999999999999999999999999987 35677775543 7887777766
Q ss_pred cccccccccccCccccccccccccCccCcccceeEE---------------------------Eeeccccccceeccc--
Q psy12972 820 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHK---------------------------LSTTHWNFEKNYIPK-- 870 (1578)
Q Consensus 820 ~~~~~~~~i~~~Ptiklf~~~~~~~~~~~~i~~~~v---------------------------i~Lt~~nF~~~vl~~-- 870 (1578)
|++++|+.+......++++..-.. .-+.+.+-...+-+.
T Consensus 118 ------------Ptlryf~~~~~~~~~G~~~~~~~~~~ei~~~l~~~la~~~~~~~~~~WP~f~pl~~~~~~~~l~~~~~ 185 (606)
T KOG1731|consen 118 ------------PTLRYFPPDSQNKTDGSDVSGPVIPSEIRDQLIRTLAEEDAQNRYPSWPNFDPLKDTTTLEELDEGIS 185 (606)
T ss_pred ------------ceeeecCCccccCcCCCcccCCcchhhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcchHHHHhcccc
Confidence 888888865432222222211000 011111111111111
Q ss_pred CCCCcEEEEE-EcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 871 SYTTPHLILF-YSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 871 s~~~~~LV~F-yapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
+....+.|.| -.+. .=.|+.+-..+...++.+..+-+++.-.+.+ ++++. +|+..+|++|+.........
T Consensus 186 ~~~~yvAiv~e~~~s-------~lg~~~~l~~l~~~~v~vr~~~d~q~~~~~~-l~~~~-~~~~llfrnG~~q~l~~~~~ 256 (606)
T KOG1731|consen 186 TTANYVAIVFETEPS-------DLGWANLLNDLPSKQVGVRARLDTQNFPLFG-LKPDN-FPLALLFRNGEQQPLWPSSS 256 (606)
T ss_pred cccceeEEEEecCCc-------ccHHHHHHhhccCCCcceEEEecchhccccc-cCCCC-chhhhhhcCCcccccccccc
Confidence 1111233333 2332 2257777777765557777777777777777 89986 99999999998664444444
Q ss_pred CHHHHHHHHHhhC
Q psy12972 950 SVQKMVEFFRLKL 962 (1578)
Q Consensus 950 s~~~L~~fi~~~l 962 (1578)
+.+..++.|.+.+
T Consensus 257 s~~~y~~~I~~~l 269 (606)
T KOG1731|consen 257 SRSAYVKKIDDLL 269 (606)
T ss_pred cHHHHHHHHHHHh
Confidence 4444444444443
No 134
>cd02949 TRX_NTR TRX domain, novel NADPH thioredoxin reductase (NTR) family; composed of fusion proteins found only in oxygenic photosynthetic organisms containing both TRX and NTR domains. The TRX domain functions as a protein disulfide reductase via the reversible oxidation of an active center dithiol present in a CXXC motif, while the NTR domain functions as a reductant to oxidized TRX. The fusion protein is bifunctional, showing both TRX and NTR activities, but it is not an independent NTR/TRX system. In plants, the protein is found exclusively in shoots and mature leaves and is localized in the chloroplast. It is involved in plant protection against oxidative stress.
Probab=99.14 E-value=1.1e-10 Score=114.67 Aligned_cols=86 Identities=22% Similarity=0.368 Sum_probs=79.1
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSV 951 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~ 951 (1578)
.+++++|.||++||+.|+.+.|.++++++.+.+. +.++.+|++++++++++++|.+ +||+++|++|+......|..+.
T Consensus 12 ~~~~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~-v~~~~id~d~~~~l~~~~~v~~-vPt~~i~~~g~~v~~~~g~~~~ 89 (97)
T cd02949 12 SDRLILVLYTSPTCGPCRTLKPILNKVIDEFDGA-VHFVEIDIDEDQEIAEAAGIMG-TPTVQFFKDKELVKEISGVKMK 89 (97)
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCCCHHHHHHCCCee-ccEEEEEECCeEEEEEeCCccH
Confidence 4789999999999999999999999999999764 9999999999999999999997 9999999999988777798999
Q ss_pred HHHHHHHH
Q psy12972 952 QKMVEFFR 959 (1578)
Q Consensus 952 ~~L~~fi~ 959 (1578)
++|.+|++
T Consensus 90 ~~~~~~l~ 97 (97)
T cd02949 90 SEYREFIE 97 (97)
T ss_pred HHHHHhhC
Confidence 99988873
No 135
>KOG4236|consensus
Probab=99.13 E-value=9.1e-11 Score=138.23 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=103.8
Q ss_pred CChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++..+|+-|-++.+|||-||.||-|.. ++|++|||||.-. .++ |
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK--------------------lrF-p------------- 603 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK--------------------LRF-P------------- 603 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeec--------------------ccC-C-------------
Confidence 3578899999999999999999999996 4999999998731 011 1
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHHHH--
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFTAF-- 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~~~-- 552 (1578)
-.+|-.+|+|.+-++.+. +|+|.--....|-..+-+.|||-+.|--|.-+..-+...++ +.+-. .+.+++
T Consensus 604 -~kqesqlR~EVaILq~l~-----HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~-er~TkFlvtQIL~A 676 (888)
T KOG4236|consen 604 -TKQESQLRNEVAILQNLH-----HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLP-ERITKFLVTQILVA 676 (888)
T ss_pred -CchHHHHHHHHHHHHhcC-----CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccch-HHHHHHHHHHHHHH
Confidence 123444577777776653 55555555554444444589999999877665544434443 43333 233333
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCch
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDK 584 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~ 584 (1578)
++.+|..|++|||+||.|||.. +++++|||-+
T Consensus 677 Lr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 677 LRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred HHHhhhcceeeccCCchheeeccCCCCCceeeccccce
Confidence 8889999999999999999954 6888888865
No 136
>cd02950 TxlA TRX-like protein A (TxlA) family; TxlA was originally isolated from the cyanobacterium Synechococcus. It is found only in oxygenic photosynthetic organisms. TRX is a small enzyme that participate in redox reactions, via the reversible oxidation of an active site dithiol present in a CXXC motif. Disruption of the txlA gene suggests that the protein is involved in the redox regulation of the structure and function of photosynthetic apparatus. The plant homolog (designated as HCF164) is localized in the chloroplast and is involved in the assembly of the cytochrome b6f complex, which takes a central position in photosynthetic electron transport.
Probab=99.13 E-value=1.1e-10 Score=122.95 Aligned_cols=97 Identities=24% Similarity=0.364 Sum_probs=81.4
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc--hhhHhHcCccccCCcEEEE-c
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE--QGLARRLGVGSQLPQIALL-T 937 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~--~~L~~k~gV~~~~PTl~lf-~ 937 (1578)
.+|++.+ ..+++++|.|||+||++|+.+.|.+.++++.+.+. +.|+.||++.+ ..++++|+|.+ +||+++| +
T Consensus 11 ~~~~~a~---~~gk~vvV~F~A~WC~~C~~~~p~l~~l~~~~~~~-~~~v~v~vd~~~~~~~~~~~~V~~-iPt~v~~~~ 85 (142)
T cd02950 11 TPPEVAL---SNGKPTLVEFYADWCTVCQEMAPDVAKLKQKYGDQ-VNFVMLNVDNPKWLPEIDRYRVDG-IPHFVFLDR 85 (142)
T ss_pred CCHHHHH---hCCCEEEEEEECCcCHHHHHhHHHHHHHHHHhccC-eeEEEEEcCCcccHHHHHHcCCCC-CCEEEEECC
Confidence 3455443 45789999999999999999999999999999765 77887777654 58999999998 9999999 5
Q ss_pred CCccccccCCCCCHHHHHHHHHhhC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+......|..+.+.|.+++.+.+
T Consensus 86 ~G~~v~~~~G~~~~~~l~~~l~~l~ 110 (142)
T cd02950 86 EGNEEGQSIGLQPKQVLAQNLDALV 110 (142)
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 8988877779888899999998766
No 137
>KOG0912|consensus
Probab=99.12 E-value=1.1e-10 Score=129.98 Aligned_cols=212 Identities=16% Similarity=0.146 Sum_probs=125.1
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCc--ceeeeeecccCccccccCCccccccccccccC
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV--GFFTVHYDLFGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~v--g~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
|++..+ .+...+||.|||+||..++.|+|+|+++|..++..-- .++ .|++||-+.-++..+ +.+..|
T Consensus 5 N~~~il---~s~elvfv~FyAdWCrFSq~L~piF~EAa~~~~~e~P~~kvv------wg~VDcd~e~~ia~k--y~I~Ky 73 (375)
T KOG0912|consen 5 NIDSIL---DSNELVFVNFYADWCRFSQMLKPIFEEAAAKFKQEFPEGKVV------WGKVDCDKEDDIADK--YHINKY 73 (375)
T ss_pred cHHHhh---ccceEEeeeeehhhchHHHHHhHHHHHHHHHHHHhCCCcceE------EEEcccchhhHHhhh--hccccC
Confidence 444444 3578899999999999999999999999999986521 122 233444444333333 445566
Q ss_pred ccccccccccccCccCcccce------eEEEeec--cc------cccceecccCCCCcEEEEEEcCCCcccccccHHHHH
Q psy12972 832 PFDDVFSEGFNFPFEEHDISL------FHKLSTT--HW------NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKK 897 (1578)
Q Consensus 832 Ptiklf~~~~~~~~~~~~i~~------~~vi~Lt--~~------nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~ 897 (1578)
||+++|..|+-..+++++... +....++ -+ ++.+... .+++.++-.|-...... ...+.+
T Consensus 74 PTlKvfrnG~~~~rEYRg~RsVeaL~efi~kq~s~~i~Ef~sl~~l~n~~~--p~K~~vIgyF~~kdspe----y~~~~k 147 (375)
T KOG0912|consen 74 PTLKVFRNGEMMKREYRGQRSVEALIEFIEKQLSDPINEFESLDQLQNLDI--PSKRTVIGYFPSKDSPE----YDNLRK 147 (375)
T ss_pred ceeeeeeccchhhhhhccchhHHHHHHHHHHHhccHHHHHHhHHHHHhhhc--cccceEEEEeccCCCch----HHHHHH
Confidence 999999988765555543322 2221111 11 2222221 12344444443232221 235678
Q ss_pred HHHHhCCCc-eEEEEEECccchhhHhHcCccccCCc--EEEEcCCccc---cccCCCCCHHHHHHHHHhhCCCccccccc
Q psy12972 898 LMDELSPLG-VGFFTVHVHNEQGLARRLGVGSQLPQ--IALLTDGRTS---FFKEPSFSVQKMVEFFRLKLPYKLIVPLS 971 (1578)
Q Consensus 898 lA~~l~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PT--l~lf~~G~~~---~y~~G~~s~~~L~~fi~~~lp~~vv~~it 971 (1578)
+|..+++.- +-++.-|. .+-.. .|. +++|..+... .|.+...+.+.+..||.+..-| +|..+|
T Consensus 148 va~~lr~dc~f~V~~gD~---------~~~~~-~~~~~~~~f~pd~~~~~~~f~G~~~nf~el~~Wi~dKcvp-LVREiT 216 (375)
T KOG0912|consen 148 VASLLRDDCVFLVGFGDL---------LKPHE-PPGKNILVFDPDHSEPNHEFLGSMTNFDELKQWIQDKCVP-LVREIT 216 (375)
T ss_pred HHHHHhhccEEEeecccc---------ccCCC-CCCCceEEeCCCcCCcCcccccccccHHHHHHHHHhcchh-hhhhhh
Confidence 888887652 11111111 11121 333 4555544433 2443456688999999887743 688999
Q ss_pred cccHHHHhhcccCCCcEEEEEeccCC
Q psy12972 972 ATNVDAFLDNWREDNKVHALLFQRSL 997 (1578)
Q Consensus 972 ~~~~~~fl~~~~~~~~~~VlfF~~~~ 997 (1578)
-+|.+++.+. ..|++++|.++.
T Consensus 217 FeN~EELtEE----GlPflILf~~kd 238 (375)
T KOG0912|consen 217 FENAEELTEE----GLPFLILFRKKD 238 (375)
T ss_pred hccHHHHhhc----CCceEEEEecCC
Confidence 9999998876 789999985544
No 138
>cd02987 Phd_like_Phd Phosducin (Phd)-like family, Phd subfamily; Phd is a cytosolic regulator of G protein functions. It specifically binds G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane. This impedes the formation of a functional G protein trimer (G protein alphabetagamma), thereby inhibiting G protein-mediated signal transduction. Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=99.12 E-value=1.2e-10 Score=126.78 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=75.7
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+++. ++|.+.|...+.+.+++|.||+|||++|+.+.|.++++|..+.. +.|++||+++. .++.+|+|.+ .||+
T Consensus 64 v~ei~~~~~f~~~v~~~~~~~~VVV~Fya~wc~~Ck~m~~~l~~LA~~~~~--vkF~kVd~d~~-~l~~~f~v~~-vPTl 139 (175)
T cd02987 64 VYELDSGEQFLDAIDKEGKDTTVVVHIYEPGIPGCAALNSSLLCLAAEYPA--VKFCKIRASAT-GASDEFDTDA-LPAL 139 (175)
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCchHHHHHHHHHHHHHHCCC--eEEEEEeccch-hhHHhCCCCC-CCEE
Confidence 446777 89998886554556999999999999999999999999999853 89999999987 8999999997 9999
Q ss_pred EEEcCCcccccc
Q psy12972 934 ALLTDGRTSFFK 945 (1578)
Q Consensus 934 ~lf~~G~~~~y~ 945 (1578)
++|++|+.+...
T Consensus 140 llyk~G~~v~~~ 151 (175)
T cd02987 140 LVYKGGELIGNF 151 (175)
T ss_pred EEEECCEEEEEE
Confidence 999999866433
No 139
>KOG4250|consensus
Probab=99.11 E-value=8.6e-11 Score=144.62 Aligned_cols=129 Identities=21% Similarity=0.269 Sum_probs=85.5
Q ss_pred ccccCCcccccccceEEEEEEe-cCCCEEEEEEecchh----hhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDL----RERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i----~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+...+-+|.|++|+||+|+. .+|+.||||+-++-. ++....++.+|+.+ +
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-----------n------------ 69 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-----------N------------ 69 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-----------C------------
Confidence 4556668899999999999995 589999999877532 11111222222111 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEee-C-CCCceEEEEeccCCCcCCchhhH--hhcCCCHHHHHHHHHHHH-
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILW-D-KSSTRVLTTEFIDGVKISDKEGL--LEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~-~-~~t~~VLVME~i~G~~l~d~~~l--~~~~~~~~~v~~~l~~~~- 552 (1578)
..|+-. .+.||..-. - -+...||||||+.|++|.....- ...|++..++...+.++.
T Consensus 70 ---------h~NIVk---------~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~ 131 (732)
T KOG4250|consen 70 ---------HPNIVK---------LFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVS 131 (732)
T ss_pred ---------chhhhh---------hcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHH
Confidence 111111 122333221 1 14457999999999999876331 246888888877776655
Q ss_pred -HHHHHHcCccccCCCCCCCC
Q psy12972 553 -AEQIFQTGFVHADPHSGNDV 572 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNil 572 (1578)
+..++++|++|||+||||||
T Consensus 132 al~~LrEn~IvHRDlKP~NIv 152 (732)
T KOG4250|consen 132 ALRHLRENGIVHRDLKPGNIV 152 (732)
T ss_pred HHHHHHHcCceeccCCCCcEE
Confidence 78899999999999999999
No 140
>cd02983 P5_C P5 family, C-terminal redox inactive TRX-like domain; P5 is a protein disulfide isomerase (PDI)-related protein with a domain structure of aa'b (where a and a' are redox active TRX domains and b is a redox inactive TRX-like domain). Like PDI, P5 is located in the endoplasmic reticulum (ER) and displays both isomerase and chaperone activities, which are independent of each other. Compared to PDI, the isomerase and chaperone activities of P5 are lower. The first cysteine in the CXXC motif of both redox active domains in P5 is necessary for isomerase activity. The P5 gene was first isolated as an amplified gene from a hydroxyurea-resistant hamster cell line. The zebrafish P5 homolog has been implicated to play a critical role in establishing left/right asymmetries in the embryonic midline. The C-terminal domain is likely involved in substrate binding, similar to the b and b' domains of PDI.
Probab=99.11 E-value=4.1e-10 Score=116.53 Aligned_cols=114 Identities=19% Similarity=0.349 Sum_probs=97.7
Q ss_pred CCCcccCchhhhhhcCCCCceEEEEEecCC-----cchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCC
Q psy12972 1076 LTLPRISSQSMLDAVCPVKKLCVVLFSEDS-----PEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPE 1150 (1578)
Q Consensus 1076 p~vpeLts~~~~~~~c~~~~lcVll~~~~~-----~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~ 1150 (1578)
|.+.+||+++.++..|..+++|||++.++. ++.+...+.|+++|++ |+++++.|+|+|++.|..+++.|..+.
T Consensus 2 ~~~~~l~~~~~~~~~C~~~~~C~i~~l~~~~d~~~e~~~~~~~~l~~vAk~--~kgk~i~Fv~vd~~~~~~~~~~fgl~~ 79 (130)
T cd02983 2 PEIIELTSEDVFEETCEEKQLCIIAFLPHILDCQASCRNKYLEILKSVAEK--FKKKPWGWLWTEAGAQLDLEEALNIGG 79 (130)
T ss_pred CceEEecCHHHHHhhccCCCeEEEEEcCccccCCHHHHHHHHHHHHHHHHH--hcCCcEEEEEEeCcccHHHHHHcCCCc
Confidence 578899999999999977799999998643 3457788999999999 999989999999999999999983222
Q ss_pred CCCccccceeEEEEEcCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1151 DSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1151 ~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
.++|++++.|.++.+|..+.++ +|.++|.+|++.+++|...
T Consensus 80 ------~~~P~v~i~~~~~~KY~~~~~~---------~t~e~i~~Fv~~~l~Gkl~ 120 (130)
T cd02983 80 ------FGYPAMVAINFRKMKFATLKGS---------FSEDGINEFLRELSYGRGP 120 (130)
T ss_pred ------cCCCEEEEEecccCccccccCc---------cCHHHHHHHHHHHHcCCcc
Confidence 4789999999876799877664 7889999999999999986
No 141
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.11 E-value=8e-11 Score=145.81 Aligned_cols=69 Identities=39% Similarity=0.754 Sum_probs=65.8
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|||++|||+++|+.++||+|||+|+++||||+++.+.+.++|++|++||++|+|+.+|+.||.+|..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 599999999999999999999999999999999988888899999999999999999999999988754
No 142
>PTZ00051 thioredoxin; Provisional
Probab=99.10 E-value=9.1e-11 Score=115.08 Aligned_cols=89 Identities=19% Similarity=0.414 Sum_probs=75.7
Q ss_pred cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
.++|.+.+ +.+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++++..++++|+|.+ +||+++|++|
T Consensus 8 ~~~~~~~~---~~~~~vli~f~~~~C~~C~~~~~~l~~l~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~g 81 (98)
T PTZ00051 8 QAEFESTL---SQNELVIVDFYAEWCGPCKRIAPFYEECSKEYTK--MVFVKVDVDELSEVAEKENITS-MPTFKVFKNG 81 (98)
T ss_pred HHHHHHHH---hcCCeEEEEEECCCCHHHHHHhHHHHHHHHHcCC--cEEEEEECcchHHHHHHCCCce-eeEEEEEeCC
Confidence 34566644 3478999999999999999999999999998754 8999999999999999999998 9999999999
Q ss_pred ccccccCCCCCHHHHH
Q psy12972 940 RTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 940 ~~~~y~~G~~s~~~L~ 955 (1578)
+......|. ..++|.
T Consensus 82 ~~~~~~~G~-~~~~~~ 96 (98)
T PTZ00051 82 SVVDTLLGA-NDEALK 96 (98)
T ss_pred eEEEEEeCC-CHHHhh
Confidence 988777674 555554
No 143
>PHA03102 Small T antigen; Reviewed
Probab=99.10 E-value=6.3e-11 Score=123.95 Aligned_cols=67 Identities=30% Similarity=0.466 Sum_probs=61.4
Q ss_pred CCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 637 LDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 637 ~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
...|++|||+++| |.++||+|||++++++||||+++ .++|++|++||++|+|+..|..||.+|....
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 4578999999999 99999999999999999999754 5799999999999999999999999987653
No 144
>KOG0581|consensus
Probab=99.10 E-value=3e-10 Score=131.57 Aligned_cols=136 Identities=18% Similarity=0.209 Sum_probs=92.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||+|+=|.|++++++ +|+-.|+|+.+-++.. ++++++.+||+..++.
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~------------------------------~~~~Qi~rEl~il~~~ 134 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP------------------------------ALQKQILRELEILRSC 134 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH------------------------------HHHHHHHHHHHHHhhC
Confidence 46999999999999986 7899999998544332 3344455555543332
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~ 561 (1578)
..+ +|-+.|.-+.. .-.|+|||+||.+|+++.. ....++...++....+++ +..+|. +++
T Consensus 135 -----------~sp--yIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k-~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I 200 (364)
T KOG0581|consen 135 -----------QSP--YIVGFYGAFYSNGEEISICMEYMDGGSLDDILK-RVGRIPEPVLGKIARAVLRGLSYLHEERKI 200 (364)
T ss_pred -----------CCC--CeeeEeEEEEeCCceEEeehhhcCCCCHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhccCe
Confidence 122 22233332222 2459999999999998743 123455444444444444 778884 999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
+|||+||.|||++ +|++.|||-.+.++
T Consensus 201 IHRDIKPsNlLvNskGeVKicDFGVS~~lv 230 (364)
T KOG0581|consen 201 IHRDIKPSNLLVNSKGEVKICDFGVSGILV 230 (364)
T ss_pred eeccCCHHHeeeccCCCEEeccccccHHhh
Confidence 9999999999975 69999999887664
No 145
>KOG0605|consensus
Probab=99.09 E-value=3.6e-10 Score=135.65 Aligned_cols=132 Identities=17% Similarity=0.196 Sum_probs=83.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||-|++|+||.|+-+ +|.-.|+|+++.. +|.- +.+.
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS-------~M~~----------------------------------~~Qv 185 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKS-------EMLK----------------------------------KNQV 185 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHH-------HHHh----------------------------------hhhH
Confidence 79999999999999976 7999999998632 2111 1111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++...=|..+.....-.|-+.|-.+-.. -+|||||++|+.+..+. ...+ ++...+---+.+++ ++.||++|++
T Consensus 186 ~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL--~~~~~L~e~~arfYiaE~vlAI~~iH~~gyI 263 (550)
T KOG0605|consen 186 EHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLL--MRKDTLTEDWARFYIAETVLAIESIHQLGYI 263 (550)
T ss_pred HHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHH--HhcCcCchHHHHHHHHHHHHHHHHHHHcCcc
Confidence 1111112222211222344555444333 36999999999988763 3333 33333333455555 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~ 583 (1578)
|||+||.|+|+. .+++.|||+
T Consensus 264 HRDIKPdNlLiD~~GHiKLSDFGL 287 (550)
T KOG0605|consen 264 HRDIKPDNLLIDAKGHIKLSDFGL 287 (550)
T ss_pred cccCChhheeecCCCCEeeccccc
Confidence 999999999954 355555553
No 146
>cd02986 DLP Dim1 family, Dim1-like protein (DLP) subfamily; DLP is a novel protein which shares 38% sequence identity to Dim1. Like Dim1, it is also implicated in pre-mRNA splicing and cell cycle progression. DLP is located in the nucleus and has been shown to interact with the U5 small nuclear ribonucleoprotein particle (snRNP)-specific 102kD protein (or Prp6). Dim1 protein, also known as U5 snRNP-specific 15kD protein is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif.
Probab=99.09 E-value=1e-10 Score=116.15 Aligned_cols=79 Identities=16% Similarity=0.278 Sum_probs=69.8
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
+.|++.+... .+++++|.|+|+||++|+.+.|.++++|.++++. +.|++||.++.+++++.|+|.. .||+++|++|+
T Consensus 3 ~~~d~~i~~~-~~klVVVdF~a~WC~pCk~mdp~l~ela~~~~~~-~~f~kVDVDev~dva~~y~I~a-mPtfvffkngk 79 (114)
T cd02986 3 KEVDQAIKST-AEKVLVLRFGRDEDAVCLQLDDILSKTSHDLSKM-ASIYLVDVDKVPVYTQYFDISY-IPSTIFFFNGQ 79 (114)
T ss_pred HHHHHHHHhc-CCCEEEEEEeCCCChhHHHHHHHHHHHHHHccCc-eEEEEEeccccHHHHHhcCcee-CcEEEEEECCc
Confidence 3455555433 5899999999999999999999999999999865 8999999999999999999997 99999999998
Q ss_pred cc
Q psy12972 941 TS 942 (1578)
Q Consensus 941 ~~ 942 (1578)
..
T Consensus 80 h~ 81 (114)
T cd02986 80 HM 81 (114)
T ss_pred EE
Confidence 55
No 147
>cd02947 TRX_family TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functio
Probab=99.08 E-value=2.7e-10 Score=108.75 Aligned_cols=91 Identities=26% Similarity=0.543 Sum_probs=78.6
Q ss_pred cccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc
Q psy12972 862 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT 941 (1578)
Q Consensus 862 nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~ 941 (1578)
+|.+.+ ..+++++|.||++||++|..+.|.++++++. .+ ++.++.+|++.+.++++++++.+ +||+++|.+|+.
T Consensus 2 ~~~~~~---~~~~~~ll~~~~~~C~~C~~~~~~~~~~~~~-~~-~~~~~~i~~~~~~~~~~~~~v~~-~P~~~~~~~g~~ 75 (93)
T cd02947 2 EFEELI---KSAKPVVVDFWAPWCGPCKAIAPVLEELAEE-YP-KVKFVKVDVDENPELAEEYGVRS-IPTFLFFKNGKE 75 (93)
T ss_pred chHHHH---hcCCcEEEEEECCCChhHHHhhHHHHHHHHH-CC-CceEEEEECCCChhHHHhcCccc-ccEEEEEECCEE
Confidence 445444 2348999999999999999999999999988 33 49999999999999999999997 999999999987
Q ss_pred ccccCCCCCHHHHHHHH
Q psy12972 942 SFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi 958 (1578)
...+.|..+.+.|.+|+
T Consensus 76 ~~~~~g~~~~~~l~~~i 92 (93)
T cd02947 76 VDRVVGADPKEELEEFL 92 (93)
T ss_pred EEEEecCCCHHHHHHHh
Confidence 76677888888998887
No 148
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.07 E-value=4.4e-10 Score=121.09 Aligned_cols=124 Identities=18% Similarity=0.221 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+|++.|..++||+++.. |+.|+||+..++.. ...++..|++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--------------------------------------~~~~~~~E~~ 44 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--------------------------------------LLINRENEAE 44 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--------------------------------------cccCHHHHHH
Confidence 78999999999999864 78999998765421 0135678888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC-----ccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG-----FVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G-----~vH 563 (1578)
+++.+.+. ..+|+++....+..++||||++|.++.+... .+ ......+.++ +..+|..+ ++|
T Consensus 45 ~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~l~~~-l~~LH~~~~~~~~~~H 111 (170)
T cd05151 45 NSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEKIAKL-LKKLHSSPLPDLVPCH 111 (170)
T ss_pred HHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHHHHHH-HHHHhCCCCCCceeec
Confidence 88888753 2378888776667899999999999876411 11 2233444443 55678777 599
Q ss_pred cCCCCCCCCCC--eeEEecCCch
Q psy12972 564 ADPHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~--~v~liDfG~~ 584 (1578)
+|+||+|||+. ++++||||..
T Consensus 112 gD~~~~Nil~~~~~~~liDf~~a 134 (170)
T cd05151 112 NDLLPGNFLLDDGRLWLIDWEYA 134 (170)
T ss_pred CCCCcCcEEEECCeEEEEecccc
Confidence 99999999963 5778888754
No 149
>KOG0615|consensus
Probab=99.06 E-value=4.4e-10 Score=130.83 Aligned_cols=140 Identities=20% Similarity=0.267 Sum_probs=92.0
Q ss_pred CcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+-+|+|.+|-|-.|.- ++|+.||||+....--. + . ++....+.|-++|
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~----~-------------~-------------s~~~~~~~~v~~E 226 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKST----G-------------C-------------SRAIAKTRDVQNE 226 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcc----c-------------c-------------cccccchhhhHHH
Confidence 36899999999999985 58999999998642110 0 0 0001123445777
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVH 563 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH 563 (1578)
+.-+.++. |...|.+-..+.+ ...-+||||||+|+.|-|.. .+++.-.++..+.++..+ +..+|..|+.|
T Consensus 227 ieILkkL~----HP~IV~~~d~f~~-~ds~YmVlE~v~GGeLfd~v--v~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H 299 (475)
T KOG0615|consen 227 IEILKKLS----HPNIVRIKDFFEV-PDSSYMVLEYVEGGELFDKV--VANKYLREDLGKLLFKQLLTAVKYLHSQGIIH 299 (475)
T ss_pred HHHHHhcC----CCCEEEEeeeeec-CCceEEEEEEecCccHHHHH--HhccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence 77777764 3333555555432 22338999999999998753 333333333333332222 67899999999
Q ss_pred cCCCCCCCCCC------eeEEecCCch
Q psy12972 564 ADPHSGNDVNT------WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~------~v~liDfG~~ 584 (1578)
||+||.|||+. .+++.|||++
T Consensus 300 RDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 300 RDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred ccCCcceEEeccCCcceEEEecccchh
Confidence 99999999965 2777788864
No 150
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.05 E-value=9.1e-10 Score=125.88 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=95.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|++|.||+|...+++.||+|+.++..... .+.++.+|++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~------------------------------------~~~~~~~e~~ 44 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE------------------------------------LKIKFLSEAR 44 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH------------------------------------HHHHHHHHHH
Confidence 4689999999999998899999999876543211 1124566666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+...+.+...+ ......+|||||++|.++.+........++...+...+.++. +..+|..|++|+|+
T Consensus 45 ~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl 119 (250)
T cd05085 45 ILKQY----DHPNIVKLIGVC-TQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDL 119 (250)
T ss_pred HHHhC----CCCCcCeEEEEE-ecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccc
Confidence 66654 222223333333 233467899999999999876433233456666666555554 67889999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 120 ~p~nili~~~~~~~l~d~g~~~ 141 (250)
T cd05085 120 AARNCLVGENNVLKISDFGMSR 141 (250)
T ss_pred ChheEEEcCCCeEEECCCccce
Confidence 99999975 48999999763
No 151
>cd03006 PDI_a_EFP1_N PDIa family, N-terminal EFP1 subfamily; EFP1 is a binding partner protein of thyroid oxidase (ThOX), also called Duox. ThOX proteins are responsible for the generation of hydrogen peroxide, a crucial substrate of thyroperoxidase, which functions to iodinate thyroglobulin and synthesize thyroid hormones. EFP1 was isolated through a yeast two-hybrid method using the EF-hand fragment of dog Duox1 as a bait. It could be one of the partners in the assembly of a multiprotein complex constituting the thyroid hydrogen peroxide generating system. EFP1 contains two TRX domains related to the redox active TRX domains of protein disulfide isomerase (PDI). This subfamily is composed of the N-terminal TRX domain of EFP1, which contains a CXXS sequence in place of the typical CXXC motif, similar to ERp44. The CXXS motif allows the formation of stable mixed disulfides, crucial for the ER-retention function of ERp44.
Probab=99.05 E-value=4.2e-11 Score=120.75 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=60.9
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cC-ccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FG-TTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~-~~~~i~g~~~~~~ 823 (1578)
.+.++..||++.+.-.++++++||+||||||+||+.++|.|+++|+.+++. .++.++|..+. +| ....+.+
T Consensus 11 v~~l~~~~f~~~~~v~~~~~~vlV~FyA~WC~~Ck~l~p~~~~la~~~~~~v~~~~Vd~d~~~~l~~~~~~I~~------ 84 (113)
T cd03006 11 VLDFYKGQLDYAEELRTDAEVSLVMYYAPWDAQSQAARQEFEQVAQKLSDQVLFVAINCWWPQGKCRKQKHFFY------ 84 (113)
T ss_pred eEEechhhhHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCChHHHHHhcCCcc------
Confidence 457778899987544568899999999999999999999999999999864 34444543322 44 2344444
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
+||+.+|..|-
T Consensus 85 -------~PTl~lf~~g~ 95 (113)
T cd03006 85 -------FPVIHLYYRSR 95 (113)
T ss_pred -------cCEEEEEECCc
Confidence 49999997653
No 152
>KOG0722|consensus
Probab=99.05 E-value=1.1e-10 Score=126.59 Aligned_cols=70 Identities=40% Similarity=0.676 Sum_probs=65.3
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
....|+|++|||+++++.+||.+|||+||+++|||+++++.+.+.|..|..||++|.|.+.|..||-.-.
T Consensus 30 CG~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyald 99 (329)
T KOG0722|consen 30 CGAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALD 99 (329)
T ss_pred ccchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence 3457999999999999999999999999999999999999989999999999999999999999997443
No 153
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.04 E-value=1.1e-09 Score=121.21 Aligned_cols=95 Identities=26% Similarity=0.443 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHH-hhCCC--CCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcC
Q psy12972 484 LNEGRNAERCSK-DLAHL--PYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~-~~~~~--~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G 560 (1578)
.++..|+.+++. .+... +.+.+-+-.+.+++..+|+||||||.++.|...+. +.++..+.+ .+.++|.+|
T Consensus 83 ~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~~-~ikqlH~~G 155 (229)
T PF06176_consen 83 SRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------EDLAEKIVE-AIKQLHKHG 155 (229)
T ss_pred HHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchhcC------HHHHHHHHH-HHHHHHHcC
Confidence 445556666654 23322 23444455667888999999999999999875432 235555554 579999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~~~ 585 (1578)
++|+||||||++++ .+++||+++..
T Consensus 156 ~~HGD~hpgNFlv~~~~i~iID~~~k~ 182 (229)
T PF06176_consen 156 FYHGDPHPGNFLVSNNGIRIIDTQGKR 182 (229)
T ss_pred CccCCCCcCcEEEECCcEEEEECcccc
Confidence 99999999999965 59999998763
No 154
>cd02982 PDI_b'_family Protein Disulfide Isomerase (PDIb') family, redox inactive TRX-like domain b'; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI, calsequestrin and other PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5 and PDIR. PDI, ERp57, ERp72, P5 and PDIR are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and one or more redox inactive TRX-like (b) domains. The molecular structure of PDI is abb'a'. Also included in this family is the PDI-related protein ERp27, w
Probab=99.04 E-value=5.3e-10 Score=110.61 Aligned_cols=87 Identities=21% Similarity=0.326 Sum_probs=78.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCcc--ccCCcEEEEcC--CccccccCCC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG--SQLPQIALLTD--GRTSFFKEPS 948 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~--~~~PTl~lf~~--G~~~~y~~G~ 948 (1578)
++++++.|+++||++|+.+.|.++++|+++++. +.|+.||+++++.+++.+||. + +|+++++++ |....+..|.
T Consensus 12 ~~~~~~~f~~~~~~~~~~~~~~~~~vA~~~~~~-v~f~~vd~~~~~~~~~~~~i~~~~-~P~~~~~~~~~~~k~~~~~~~ 89 (103)
T cd02982 12 GKPLLVLFYNKDDSESEELRERFKEVAKKFKGK-LLFVVVDADDFGRHLEYFGLKEED-LPVIAIINLSDGKKYLMPEEE 89 (103)
T ss_pred CCCEEEEEEcCChhhHHHHHHHHHHHHHHhCCe-EEEEEEchHhhHHHHHHcCCChhh-CCEEEEEecccccccCCCccc
Confidence 579999999999999999999999999999987 999999999999999999999 7 999999988 6666666566
Q ss_pred CCHHHHHHHHHhh
Q psy12972 949 FSVQKMVEFFRLK 961 (1578)
Q Consensus 949 ~s~~~L~~fi~~~ 961 (1578)
.+.++|.+|+.+.
T Consensus 90 ~~~~~l~~fi~~~ 102 (103)
T cd02982 90 LTAESLEEFVEDF 102 (103)
T ss_pred cCHHHHHHHHHhh
Confidence 6899999999764
No 155
>KOG0667|consensus
Probab=99.03 E-value=6.7e-10 Score=136.71 Aligned_cols=136 Identities=21% Similarity=0.146 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.||||||-||.. ++|+.|||||.+-.-+-. .++ ..|.
T Consensus 192 e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~-----------------------------------~Q~---~~Ei 233 (586)
T KOG0667|consen 192 EVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFL-----------------------------------RQA---QIEI 233 (586)
T ss_pred EEecccccceeEEEEecCCCcEEEEEeeccChHHH-----------------------------------HHH---HHHH
Confidence 7899999999999995 589999999986432210 000 2344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+-++++++.- ......+-+.+..+ -..-.||.|.+ +..|.++..- .-.|++...+-..+.+++ |..+++.|+|
T Consensus 234 ~iL~~ln~~d-~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~II 311 (586)
T KOG0667|consen 234 RILELLNKHD-PDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGII 311 (586)
T ss_pred HHHHHHhccC-CCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5555555311 11223333444333 35568999999 7788887432 224677665544444444 7788999999
Q ss_pred ccCCCCCCCCCC-----eeEEecCCch
Q psy12972 563 HADPHSGNDVNT-----WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~-----~v~liDfG~~ 584 (1578)
||||||.|||+- .|++||||..
T Consensus 312 HcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 312 HCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eccCChhheeeccCCcCceeEEecccc
Confidence 999999999943 5999999976
No 156
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.03 E-value=8e-10 Score=133.24 Aligned_cols=130 Identities=15% Similarity=0.065 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|+||+|..+ +|+.||||+..+..... ..+ .....|.+|
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-~~~-------------------------------~~~~~~~~E 71 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-SKP-------------------------------LARHLAARE 71 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-ccH-------------------------------HHHHHHHHH
Confidence 67999999999999865 68889999875331100 000 011236788
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP 566 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp 566 (1578)
++.+.++++ +.+ ||.++. ....+|||||++|.+|... ... ....+...+++ .+..+|..|++|||+
T Consensus 72 ~~iL~~L~h-----~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~---~~~--~~~~~~~~i~~-aL~~lH~~gIiHrDL 137 (365)
T PRK09188 72 IRALKTVRG-----IGV-VPQLLA--TGKDGLVRGWTEGVPLHLA---RPH--GDPAWFRSAHR-ALRDLHRAGITHNDL 137 (365)
T ss_pred HHHHHhccC-----CCC-CcEEEE--cCCcEEEEEccCCCCHHHh---Ccc--chHHHHHHHHH-HHHHHHHCCCeeCCC
Confidence 888887742 222 566664 3567999999999888632 111 12334444443 377899999999999
Q ss_pred -CCCCCCCC---eeEEecCCch
Q psy12972 567 -HSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 567 -HPGNilv~---~v~liDfG~~ 584 (1578)
||+|||+. .++++|||..
T Consensus 138 ~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 138 AKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred CCcceEEEcCCCCEEEEECccc
Confidence 89999963 4777777754
No 157
>KOG0908|consensus
Probab=98.99 E-value=6.8e-10 Score=121.12 Aligned_cols=101 Identities=19% Similarity=0.330 Sum_probs=87.4
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
++++|...+. ....+.++|.|||.|||+|+.++|.|..+|.+|.+ ..|.+||.++.+..|..+||.. .||+++|++
T Consensus 8 ~d~df~~~ls-~ag~k~v~Vdfta~wCGPCk~IaP~Fs~lankYp~--aVFlkVdVd~c~~taa~~gV~a-mPTFiff~n 83 (288)
T KOG0908|consen 8 SDSDFQRELS-AAGGKLVVVDFTASWCGPCKRIAPIFSDLANKYPG--AVFLKVDVDECRGTAATNGVNA-MPTFIFFRN 83 (288)
T ss_pred CcHHHHHhhh-ccCceEEEEEEEecccchHHhhhhHHHHhhhhCcc--cEEEEEeHHHhhchhhhcCccc-CceEEEEec
Confidence 4556777653 23467999999999999999999999999999975 6899999999999999999997 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|..+....| .++..|.+-+.+++..
T Consensus 84 g~kid~~qG-Ad~~gLe~kv~~~~st 108 (288)
T KOG0908|consen 84 GVKIDQIQG-ADASGLEEKVAKYAST 108 (288)
T ss_pred CeEeeeecC-CCHHHHHHHHHHHhcc
Confidence 999888877 6778888888887643
No 158
>KOG0192|consensus
Probab=98.98 E-value=2.4e-09 Score=129.16 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=104.3
Q ss_pred cccccceEEEEEEecCCCE-EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTKEGVE-VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~~G~~-VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
+|+|++|+||+|..+ |+. ||||+..+.-... .. +-+|++|+.-
T Consensus 49 iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~------------------------~~-----------~~~f~~E~~i 92 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDD------------------------ES-----------RKAFRREASL 92 (362)
T ss_pred cccCCceeEEEEEeC-CceeEEEEEecchhcCh------------------------HH-----------HHHHHHHHHH
Confidence 999999999999875 555 9999886542210 00 3467899998
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcC-ccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTG-FVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G-~vH~D 565 (1578)
+.++ .|...|.+..+..+-...-.|||||++|++|.++..- ....++...+...+.++. ++.+|..+ +||+|
T Consensus 93 l~~l----~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrD 168 (362)
T KOG0192|consen 93 LSRL----RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRD 168 (362)
T ss_pred HHhC----CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecc
Confidence 8884 3455566666664332235799999999999998654 356788888888887776 78899999 99999
Q ss_pred CCCCCCCCC----eeEEecCCchhhhh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKFRLV 588 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~~l~ 588 (1578)
+||.|||+. .+++.|||......
T Consensus 169 LK~~NiLv~~~~~~~KI~DFGlsr~~~ 195 (362)
T KOG0192|consen 169 LKSDNILVDLKGKTLKIADFGLSREKV 195 (362)
T ss_pred cChhhEEEcCCCCEEEECCCccceeec
Confidence 999999954 48999999874433
No 159
>KOG0583|consensus
Probab=98.98 E-value=3e-09 Score=129.21 Aligned_cols=154 Identities=19% Similarity=0.144 Sum_probs=98.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+||+|.|+.|+. .+|+.||||+....... ... ....+.+. +|.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~--------------------~~~------~~~~~~i~------rEi 70 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVS--------------------SKS------QKLDELIK------REI 70 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhccc--------------------ccc------cccchhhH------HHH
Confidence 6899999999999985 48999999976532000 000 00111111 455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH~ 564 (1578)
.++++++. +...+.+-+++. ..++-++||||+.|+.|-+...- ...+.. ..++.+++-+ ++++|..|++||
T Consensus 71 ~~~~~~~~---HpnI~~l~ev~~-t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 71 SILRRLRS---HPNIIRLLEVFA-TPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred HHHHHhcc---CCCEeEEEEEEe-cCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 66666641 223345555553 34557899999999888776432 334444 4444444433 788999999999
Q ss_pred CCCCCCCCC----CeeEEecCCchhhhhhhhhcccCCCCCCCCCC
Q psy12972 565 DPHSGNDVN----TWLYPVDLGDKFRLVLATTLREDGYPDSGEWN 605 (1578)
Q Consensus 565 DpHPGNilv----~~v~liDfG~~~~l~l~~~~~~~g~~D~G~~~ 605 (1578)
|+||.|||+ +.++++|||.+.... ...+++...+.+
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~-----~~~~~l~t~cGs 184 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISP-----GEDGLLKTFCGS 184 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccC-----CCCCcccCCCCC
Confidence 999999993 469999999874331 234455555554
No 160
>cd02988 Phd_like_VIAF Phosducin (Phd)-like family, Viral inhibitor of apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF is a Phd-like protein that functions in caspase activation during apoptosis. It was identified as an IAP binding protein through a screen of a human B-cell library using a prototype IAP. VIAF lacks a consensus IAP binding motif and while it does not function as an IAP antagonist, it still plays a regulatory role in the complete activation of caspases. VIAF itself is a substrate for IAP-mediated ubiquitination, suggesting that it may be a target of IAPs in the prevention of cell death. The similarity of VIAF to Phd points to a potential role distinct from apoptosis regulation. Phd functions as a cytosolic regulator of G protein by specifically binding to G protein betagamma (Gbg)-subunits. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Probab=98.97 E-value=7.6e-10 Score=122.01 Aligned_cols=98 Identities=11% Similarity=0.114 Sum_probs=79.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|..+|...|...+.+.+++|.||++||++|+.+.|.++++|..+.. ++|++||++.. +..|+|.+ .||++
T Consensus 84 v~eis~~~f~~eV~~as~~~~VVV~Fya~wc~~C~~m~~~l~~LA~k~~~--vkFvkI~ad~~---~~~~~i~~-lPTll 157 (192)
T cd02988 84 VYEISKPDYVREVTEASKDTWVVVHLYKDGIPLCRLLNQHLSELARKFPD--TKFVKIISTQC---IPNYPDKN-LPTIL 157 (192)
T ss_pred EEEeCHHHHHHHHHhcCCCCEEEEEEECCCCchHHHHHHHHHHHHHHCCC--CEEEEEEhHHh---HhhCCCCC-CCEEE
Confidence 45678899998887665567999999999999999999999999999853 89999999753 68999997 99999
Q ss_pred EEcCCccccccCC-------CCCHHHHHHHH
Q psy12972 935 LLTDGRTSFFKEP-------SFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y~~G-------~~s~~~L~~fi 958 (1578)
+|++|+.+....| ..+.++|..++
T Consensus 158 iyk~G~~v~~ivG~~~~gg~~~~~~~lE~~L 188 (192)
T cd02988 158 VYRNGDIVKQFIGLLEFGGMNTTMEDLEWLL 188 (192)
T ss_pred EEECCEEEEEEeCchhhCCCCCCHHHHHHHH
Confidence 9999987654444 34445555444
No 161
>cd02975 PfPDO_like_N Pyrococcus furiosus protein disulfide oxidoreductase (PfPDO)-like family, N-terminal TRX-fold subdomain; composed of proteins with similarity to PfPDO, a redox active thermostable protein believed to be the archaeal counterpart of bacterial DsbA and eukaryotic protein disulfide isomerase (PDI), which are both involved in oxidative protein folding. PfPDO contains two redox active CXXC motifs in two contiguous TRX-fold subdomains. The active site in the N-terminal TRX-fold subdomain is required for isomerase but not for reductase activity of PfPDO. The exclusive presence of PfPDO-like proteins in extremophiles may suggest that they have a special role in adaptation to extreme conditions.
Probab=98.97 E-value=8.9e-10 Score=111.47 Aligned_cols=89 Identities=11% Similarity=0.130 Sum_probs=74.8
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcccc--ccCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSF--FKEPS 948 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~--y~~G~ 948 (1578)
..+..++|.||++||++|+.+.|.+++++..+ +. +.+..||.+++++++++|+|.+ .||+++|++|.... .+.|.
T Consensus 20 ~~~~~vvv~f~a~wC~~C~~~~~~l~~la~~~-~~-i~~~~vd~d~~~~l~~~~~v~~-vPt~~i~~~g~~~~~~~~~G~ 96 (113)
T cd02975 20 KNPVDLVVFSSKEGCQYCEVTKQLLEELSELS-DK-LKLEIYDFDEDKEKAEKYGVER-VPTTIFLQDGGKDGGIRYYGL 96 (113)
T ss_pred CCCeEEEEEeCCCCCCChHHHHHHHHHHHHhc-Cc-eEEEEEeCCcCHHHHHHcCCCc-CCEEEEEeCCeecceEEEEec
Confidence 34567889999999999999999999999886 43 8999999999999999999998 99999998764321 34487
Q ss_pred CCHHHHHHHHHhhC
Q psy12972 949 FSVQKMVEFFRLKL 962 (1578)
Q Consensus 949 ~s~~~L~~fi~~~l 962 (1578)
.+..++.+|+...+
T Consensus 97 ~~~~el~~~i~~i~ 110 (113)
T cd02975 97 PAGYEFASLIEDIV 110 (113)
T ss_pred CchHHHHHHHHHHH
Confidence 88889999887543
No 162
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=98.97 E-value=3.1e-09 Score=121.79 Aligned_cols=136 Identities=18% Similarity=0.169 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+-+|.+|.
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~------------------------------------~~~~~~~e~ 44 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD------------------------------------LKAKFLQEA 44 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH------------------------------------HHHHHHHHH
Confidence 46899999999999975 89999999865432211 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++ .+..-+.+-.+. ......+|||||++|.++.++.......++...+...+.++. +..+|..|++|+|
T Consensus 45 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 45 RILKQY----SHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred HHHHhC----CCCCcceEEEEE-cCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 555443 222222222222 223456899999999999876432223456666665555555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|||++ .++++|||...
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~ 142 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSR 142 (252)
T ss_pred cchheEEEcCCCcEEECccccCc
Confidence 999999965 48999999764
No 163
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=98.96 E-value=3e-09 Score=127.79 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+......... ...-.+..|.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------~~~~~~~~e~ 52 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKL----------------------------------NEVRHVLTER 52 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------------------------------hHHHHHHHHH
Confidence 57999999999999976 699999999864321100 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~~~----h~~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 126 (333)
T cd05600 53 DILTTTK----SEWLVKLLYAF-QDDEYLYLAMEYVPGGDFRTLLN-NLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126 (333)
T ss_pred HHHHhCC----CCCCccEEEEE-EcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 4444432 22222222222 22345679999999999988743 223455555554444544 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 127 lkp~Nil~~~~~~~kL~Dfg~a~~ 150 (333)
T cd05600 127 LKPENFLIDASGHIKLTDFGLSKG 150 (333)
T ss_pred CCHHHEEECCCCCEEEEeCcCCcc
Confidence 999999965 599999997643
No 164
>KOG0593|consensus
Probab=98.94 E-value=2.2e-09 Score=120.59 Aligned_cols=130 Identities=18% Similarity=0.173 Sum_probs=88.7
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEec-----chhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQY-----IDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~-----P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
-+|.||+|.|++++.+ +|+-||||.-. |.+.+..-++++.++.+ ..
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-----------kH----------------- 60 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-----------KH----------------- 60 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-----------cc-----------------
Confidence 4799999999999987 69999999754 22222211222111111 00
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.|+-.+-+.|+... +--||.||||-.-|.+++. -.+|++.+.+-..+.+++ +...|.+++
T Consensus 61 ----~NLVnLiEVFrrkr-------------klhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~ 122 (396)
T KOG0593|consen 61 ----ENLVNLIEVFRRKR-------------KLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKNNC 122 (396)
T ss_pred ----chHHHHHHHHHhcc-------------eeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhcCe
Confidence 12222222222211 2249999999888877654 457899888888777776 677899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|||+||.|||++ .++++|||-++
T Consensus 123 IHRDIKPENILit~~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 123 IHRDIKPENILITQNGVVKLCDFGFAR 149 (396)
T ss_pred ecccCChhheEEecCCcEEeccchhhH
Confidence 9999999999976 49999999764
No 165
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=1e-09 Score=123.45 Aligned_cols=68 Identities=54% Similarity=0.916 Sum_probs=63.3
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh--HHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT--AQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~--a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
...++|++|||+++|+..||++|||++++++|||+++... +.++|+.|++||++|+|+..|..||..+
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~ 73 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIG 73 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhc
Confidence 3579999999999999999999999999999999998543 8999999999999999999999999864
No 166
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=98.93 E-value=4.2e-09 Score=126.04 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=89.0
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||||+.++..... . . ....+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~-------------------------~-------~~~~~~~e~~ 47 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA--K-------------------------D-------EVAHTLTESR 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh--h-------------------------H-------HHHHHHHHHH
Confidence 5899999999999864 79999999986432100 0 0 0012234555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+|+
T Consensus 48 ~l~~l~----hp~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDl 121 (323)
T cd05571 48 VLQNTR----HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDL 121 (323)
T ss_pred HHHhCC----CCCCCCEEEEE-EcCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 554442 22222222222 22345679999999999876532 223455555555445544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 122 kp~NIll~~~~~~kl~DfG~a~ 143 (323)
T cd05571 122 KLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CHHHEEECCCCCEEEeeCCCCc
Confidence 99999975 58999999753
No 167
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.93 E-value=5.1e-09 Score=125.67 Aligned_cols=140 Identities=15% Similarity=0.108 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +|+.||||+.......... ...-.+.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 52 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKA---------------------------------KTVEHTR 52 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhh---------------------------------hHHHHHH
Confidence 57999999999999853 6899999998643110000 0001234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|.+.+.+++ +++.+....-.......-+|||||++|..+.+... ....++...+...+.+++ +..+|..|++
T Consensus 53 ~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 127 (332)
T cd05614 53 TERNVLEHVR----QSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY-QRDNFSEDEVRFYSGEIILALEHLHKLGIV 127 (332)
T ss_pred HHHHHHHhcc----CCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 4554444442 33332222112222344579999999999877632 234566666655555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 128 HrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 128 YRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred ecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 999999999975 599999997643
No 168
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=98.93 E-value=4.7e-09 Score=126.05 Aligned_cols=135 Identities=14% Similarity=0.105 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+..... . + ....+.+|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~--~-------------------------~-------~~~~~~~E~~ 47 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA--K-------------------------D-------EVAHTLTESR 47 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h-------------------------h-------HHHHHHHHHH
Confidence 5899999999999964 79999999987532110 0 0 0012344555
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. ++.+ .+-..+ ......+|||||++|..+.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~l~-----hp~iv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 48 VLKNTR-----HPFLTSLKYSF-QTKDRLCFVMEYVNGGELFFHLS-RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred HHHhCC-----CCCCcceEEEE-EcCCEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 554432 2322 222222 22345689999999999876532 223456665555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~ 143 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCK 143 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCc
Confidence 999999975 58999999753
No 169
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=98.93 E-value=5e-09 Score=123.92 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEecC-----------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||+|++|.||+|+..+ +..||||+.++.....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 569999999999997532 3479999988754221
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--------------- 536 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--------------- 536 (1578)
...+|.+|.+.+.+++ +...+.+-..+. .....+|+|||++|.+|.++.....
T Consensus 62 -------~~~~~~~E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (304)
T cd05096 62 -------ARNDFLKEVKILSRLK----DPNIIRLLGVCV-DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPA 129 (304)
T ss_pred -------HHHHHHHHHHHHhhcC----CCCeeEEEEEEe-cCCceEEEEecCCCCcHHHHHHhccccccccccccccccc
Confidence 0123556666666553 222233323322 2345689999999999987643211
Q ss_pred ---cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 537 ---KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 537 ---~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..++...+...+.++. +..+|..|++|+|++|.||++. .+++.|||....
T Consensus 130 ~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~ 187 (304)
T cd05096 130 HCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRN 187 (304)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCcccee
Confidence 1123334444444444 7789999999999999999965 489999997643
No 170
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.92 E-value=5.7e-09 Score=124.97 Aligned_cols=137 Identities=17% Similarity=0.108 Sum_probs=87.0
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+........- . .+..+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------~------~~~~~~~e~~ 47 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNR----------------------------K------EQKHIMAERN 47 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------------------------h------HHHHHHHHHH
Confidence 5899999999999864 799999999865321100 0 0001111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +.+.+.+...+.+-..+ ......+|||||++|..+.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 V---LLKNVKHPFLVGLHYSF-QTTEKLYFVLDFVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred H---HHHhCCCCCCccEEEEE-ecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 1 11222332223332332 22345689999999999866532 233456655555554544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.|||+. .++++|||...
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~ 144 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCK 144 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcc
Confidence 99999975 58999999753
No 171
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=98.92 E-value=5e-09 Score=125.30 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=87.8
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+.++..... + ... -.+..|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~------------------------~~~-------~~~~~e~~ 47 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---D------------------------DDV-------ECTMTEKR 47 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---c------------------------cHH-------HHHHHHHH
Confidence 5899999999999975 68999999987542110 0 000 01122322
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+... .+++. +.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~~----~~h~~iv~~~~~~-~~~~~~~iv~Ey~~~g~L~~~i~-~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~d 121 (320)
T cd05590 48 ILSLA----RNHPFLTQLYCCF-QTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEITSALMFLHDKGIIYRD 121 (320)
T ss_pred HHHhc----cCCCchhceeeEE-EcCCEEEEEEcCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 22222 12232 2222222 22345679999999999876532 234566666655555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~NIli~~~~~~kL~DfG~~~ 144 (320)
T cd05590 122 LKLDNVLLDHEGHCKLADFGMCK 144 (320)
T ss_pred CCHHHeEECCCCcEEEeeCCCCe
Confidence 999999975 58999999753
No 172
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=98.92 E-value=5.8e-09 Score=124.67 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=87.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+........ ..+ . -.+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------~------~~~~~e~~ 47 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-DDD---------------------------V------DCTMTEKR 47 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-hhH---------------------------H------HHHHHHHH
Confidence 5899999999999975 68999999986542110 000 0 01123333
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+... .+++.| .+-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~----~~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 121 (321)
T cd05591 48 ILALA----AKHPFLTALHCCF-QTKDRLFFVMEYVNGGDLMFQIQ-RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRD 121 (321)
T ss_pred HHHhc----cCCCCccceeeEE-EcCCeEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 33222 223322 222222 12344579999999998876532 233456555555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 ikp~Nill~~~~~~kL~Dfg~~~ 144 (321)
T cd05591 122 LKLDNILLDAEGHCKLADFGMCK 144 (321)
T ss_pred CCHHHeEECCCCCEEEeecccce
Confidence 999999965 58999999753
No 173
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.91 E-value=6e-09 Score=127.75 Aligned_cols=136 Identities=13% Similarity=0.032 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .+ ..-.+.+|.
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~--~--------------------------~~------~~~~~~~E~ 52 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL--N--------------------------RN------QVAHVKAER 52 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h--------------------------hH------HHHHHHHHH
Confidence 56999999999999864 7899999998632100 0 00 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. -....+|||||++|..|.++.. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 53 ~il~~l~----h~~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 126 (381)
T cd05626 53 DILAEAD----NEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLLI-RMEVFPEVLARFYIAELTLAIESVHKMGFIHRD 126 (381)
T ss_pred HHHHhcC----CCCeeeeEEEEe-cCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 4444432 222222223332 2345689999999999877632 223344444433444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 127 lKp~Nili~~~~~~kL~DFGl~ 148 (381)
T cd05626 127 IKPDNILIDLDGHIKLTDFGLC 148 (381)
T ss_pred CcHHHEEECCCCCEEEeeCcCC
Confidence 999999964 5888898864
No 174
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=98.91 E-value=7.2e-09 Score=124.11 Aligned_cols=134 Identities=14% Similarity=0.113 Sum_probs=87.9
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+..... . .....+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~--~--------------------------------~~~~~~~~e~~ 47 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA--K--------------------------------DEVAHTLTENR 47 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------------hHHHHHHHHHH
Confidence 5899999999999854 89999999986532110 0 00012234554
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
.+.++. ++.| .+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|. .|++|+
T Consensus 48 ~l~~~~-----hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 48 VLQNSR-----HPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred HHHhCC-----CCCCCceEEEE-EcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 444432 2322 222222 23345689999999998876532 233466666655555555 778896 799999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|.|||+. .++++|||..
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~ 143 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLC 143 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCC
Confidence 9999999975 5899999965
No 175
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.91 E-value=3.8e-09 Score=128.36 Aligned_cols=135 Identities=16% Similarity=0.130 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-... .+... .++.|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~------~~~~e~ 52 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----------------------------KEQVA------HIRAER 52 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----------------------------hhhHH------HHHHHH
Confidence 67999999999999975 79999999986421100 00001 123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+ +. +++.+..+ ....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~l----~~-~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~~L~~lH~~givH 124 (360)
T cd05627 53 DILVEA----DG-AW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLM-KKDTLSEEATQFYIAETVLAIDAIHQLGFIH 124 (360)
T ss_pred HHHHhC----CC-CC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEc
Confidence 444333 22 22 33333222 234589999999999987642 233456555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 rDLkp~NIli~~~~~vkL~DfG~~~ 149 (360)
T cd05627 125 RDIKPDNLLLDAKGHVKLSDFGLCT 149 (360)
T ss_pred cCCCHHHEEECCCCCEEEeeccCCc
Confidence 99999999964 58999999754
No 176
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.90 E-value=6.4e-09 Score=126.62 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+... .++.|.
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~~~~------~~~~E~ 52 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLE----------------------------KEQVG------HIRAER 52 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----------------------------hhHHH------HHHHHH
Confidence 57999999999999865 79999999986321100 00001 123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+ + .|++.+..+ ....+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|
T Consensus 53 ~il~~~----~~-~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~givH 124 (363)
T cd05628 53 DILVEA----DS-L--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLM-KKDTLTEEETQFYIAETVLAIDSIHQLGFIH 124 (363)
T ss_pred HHHHhC----CC-C--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 444333 22 2 233333222 234579999999999887643 234566666655555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 rDlKp~NILi~~~~~vkL~DFGla~ 149 (363)
T cd05628 125 RDIKPDNLLLDSKGHVKLSDFGLCT 149 (363)
T ss_pred cCCCHHHeEECCCCCEEEeeccCcc
Confidence 99999999974 58999999754
No 177
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.90 E-value=7e-09 Score=126.82 Aligned_cols=135 Identities=14% Similarity=0.072 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. . .+ ..-.+.+|+
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~----------------~------------~~------~~~~~~~E~ 52 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL----------------M------------RN------QAAHVKAER 52 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH----------------h------------hh------hHHHHHHHH
Confidence 67999999999999964 7999999987532100 0 00 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+-..+. ....-+|||||++|..|.++. ...+ ++...+...+.+++ +..+|..|++|+
T Consensus 53 ~il~~l~----h~~iv~~~~~~~-~~~~~~lv~E~~~~g~L~~~i--~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHr 125 (376)
T cd05598 53 DILAEAD----NEWVVKLYYSFQ-DKDNLYFVMDYIPGGDMMSLL--IRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125 (376)
T ss_pred HHHHhCC----CCCcceEEEEEE-cCCEEEEEEeCCCCCcHHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 4444432 222222222222 234568999999999998874 2333 44444333344443 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|||++ .++++|||..
T Consensus 126 Dlkp~Nill~~~~~ikL~DFG~a 148 (376)
T cd05598 126 DIKPDNILIDRDGHIKLTDFGLC 148 (376)
T ss_pred CCCHHHEEECCCCCEEEEeCCCC
Confidence 9999999965 5899999975
No 178
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.90 E-value=8.4e-09 Score=110.33 Aligned_cols=135 Identities=19% Similarity=0.257 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.+++.|.-|-++.+-. -|.+++||..-|-- +..+.+=..++ .| --++||+
T Consensus 2 ~~i~~GAEa~i~~~~~-~g~~av~K~Ri~K~------------------------YR~p~LD~klr----r~-Rt~~Ear 51 (204)
T COG3642 2 DLIKQGAEAIIYLTDF-LGLPAVVKERIPKR------------------------YRHPELDEKLR----RE-RTRREAR 51 (204)
T ss_pred chhhCCcceeEEeeec-cCcceEEEeecCcc------------------------cCChHHHHHHH----HH-HHHHHHH
Confidence 4678899999998855 45679999764432 22222211111 11 1278999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.+++.. +|.+|.+|.-....-.||||||+|..+.|... .. ...+.+.+-.. .--||..|++|+||-+
T Consensus 52 il~~a~~~-----GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~--~~---~~~~~r~vG~~-vg~lH~~givHGDLTt 120 (204)
T COG3642 52 ILAKAREA-----GVPVPIVYDVDPDNGLIVMEYIEGELLKDALE--EA---RPDLLREVGRL-VGKLHKAGIVHGDLTT 120 (204)
T ss_pred HHHHHHHc-----CCCCCeEEEEcCCCCEEEEEEeCChhHHHHHH--hc---chHHHHHHHHH-HHHHHhcCeecCCCcc
Confidence 99999864 68899999877777889999999999987633 22 23456665554 4457999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
.||+++ ++++||||++
T Consensus 121 sNiIl~~~~i~~IDfGLg 138 (204)
T COG3642 121 SNIILSGGRIYFIDFGLG 138 (204)
T ss_pred ceEEEeCCcEEEEECCcc
Confidence 999965 4999999975
No 179
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=98.90 E-value=7.2e-09 Score=124.10 Aligned_cols=137 Identities=18% Similarity=0.078 Sum_probs=84.8
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||+|+........- ..+.++..|..
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------~~~~~~~~e~~ 47 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----------------------------------KEEKHIMSERN 47 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh----------------------------------hHHHHHHHHHH
Confidence 5899999999999965 688999999864211000 00111112211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +...+.+...+.+-..+ ......+|||||++|..+.+... ....+....+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~h~~Iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 V---LLKNVKHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred H---HHHhCCCCCCCceeEEE-EcCCeEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 1 11222222222222222 22345689999999999877643 223344444444444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||+|||+. .++++|||...
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~ 144 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCK 144 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCc
Confidence 99999974 58999999764
No 180
>KOG0577|consensus
Probab=98.90 E-value=2e-09 Score=128.82 Aligned_cols=146 Identities=20% Similarity=0.204 Sum_probs=101.5
Q ss_pred CCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEe-cchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQ-YIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq-~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
..+++.+|..+ +-||-||||-||-|+. ++.+.||||-. +-|- ...+.|
T Consensus 21 k~DPEklf~dL--rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK----------------------------Qs~EKW 70 (948)
T KOG0577|consen 21 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK----------------------------QSNEKW 70 (948)
T ss_pred cCCHHHHHHHH--HHhcCCccceeEEeeccCccceeeeeecccccc----------------------------ccHHHH
Confidence 44688888877 5699999999999995 57889999843 1111 111222
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
. |...|.+-+.+++ +...|---..|-. -+.-+||||||=| +.+|+......++...+|+.+...++
T Consensus 71 q-------DIlKEVrFL~~l~----HPntieYkgCyLr-e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~ 137 (948)
T KOG0577|consen 71 Q-------DILKEVRFLRQLR----HPNTIEYKGCYLR-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQ 137 (948)
T ss_pred H-------HHHHHHHHHHhcc----CCCcccccceeec-cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 2 2223333344432 2222222222311 1345899999977 67788777788888888988887777
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+..+|.++.+|+|++.||||++ .|++-|||.+
T Consensus 138 gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 138 GLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHhhHHhhhccccceEecCCCeeeeccccch
Confidence 8999999999999999999975 5899999975
No 181
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.90 E-value=7.4e-09 Score=123.90 Aligned_cols=137 Identities=16% Similarity=0.088 Sum_probs=86.3
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+.....- .+ ..++..|..
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---------------------------~~-------~~~~~~e~~ 47 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK---------------------------KE-------QKHIMAERN 47 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh---------------------------hH-------HHHHHHHHH
Confidence 5899999999999975 799999999864321000 00 001111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +.+.+.+..-+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~~~~l~hp~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~di 122 (323)
T cd05575 48 V---LLKNVKHPFLVGLHYSFQ-TADKLYFVLDYVNGGELFFHLQ-RERSFPEPRARFYAAEIASALGYLHSLNIIYRDL 122 (323)
T ss_pred H---HHhhCCCCCCCCeeEEEE-eCCEEEEEEcCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence 1 112222322233323322 2345689999999999876532 223455555554444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~ 144 (323)
T cd05575 123 KPENILLDSQGHVVLTDFGLCK 144 (323)
T ss_pred CHHHeEECCCCcEEEeccCCCc
Confidence 99999965 58999999753
No 182
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.89 E-value=7.6e-09 Score=116.49 Aligned_cols=148 Identities=20% Similarity=0.253 Sum_probs=104.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||.|--+-||.|...+|.+||||.-|-|.. ++ +.+.+....+...-...|+.-. + +.-.+|.+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sF-------rkvk~~R~y~~~~~h~sWl~~s---R----l~A~rEf~ 161 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SF-------RKVKRNRDYLADKEHGSWLYVS---R----LAAEREFE 161 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hh-------hhhcchhhhhccccCcchhhhH---H----HHHHHHHH
Confidence 78999999999999999999999999998833 22 2222222222222233343211 1 12255666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.++.. .++.||+|+ -.+++++|||+|+|.+|..+.. ..-+++++...+++.+-.. ...|+||||+.+
T Consensus 162 ~L~~L~~-----~G~~VP~P~--~~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~-~~~GiVHGDlSe 230 (304)
T COG0478 162 ALQRLYP-----EGVKVPKPI--AWNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKA-YRRGIVHGDLSE 230 (304)
T ss_pred HHHHhhh-----cCCCCCCcc--ccccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHH-HHcCccccCCch
Confidence 6766652 358999998 4578999999999999988631 2345678888888765544 499999999999
Q ss_pred CCCCCC---eeEEecCC
Q psy12972 569 GNDVNT---WLYPVDLG 582 (1578)
Q Consensus 569 GNilv~---~v~liDfG 582 (1578)
-||+++ .+++|||.
T Consensus 231 fNIlV~~dg~~~vIDwP 247 (304)
T COG0478 231 FNILVTEDGDIVVIDWP 247 (304)
T ss_pred heEEEecCCCEEEEeCc
Confidence 999965 46777766
No 183
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.89 E-value=4.4e-09 Score=126.39 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .. ..-.|..|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~--------------------------~~------~~~~~~~e~ 52 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML--K--------------------------RA------ETACFREER 52 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh--h--------------------------hh------hHHHHHHHH
Confidence 57999999999999965 7999999998632100 0 00 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+..+ . ++. |+.++.. .....+|||||++|..|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~----~-~~~--i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 53 DVLVNG----D-RRW--ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHhC----C-CCC--CCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 333332 1 222 2222221 22346899999999999887542234566555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~ 151 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLR 151 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceee
Confidence 99999999975 589999997543
No 184
>TIGR01295 PedC_BrcD bacteriocin transport accessory protein, putative. This model describes a small family of proteins believed to aid in the export of various class II bacteriocins, which are ribosomally-synthesized, non-lantibiotic bacterial peptide antibiotics. Members of this family are found in operons for pediocin PA-1 from Pediococcus acidilactici and brochocin-C from Brochothrix campestris.
Probab=98.89 E-value=2.1e-09 Score=110.14 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=76.9
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-----------hhHhHcC
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-----------GLARRLG 925 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-----------~L~~k~g 925 (1578)
.+|.++|.+.+ ..++..+|+|+++||++|+.+.|.+++++++.+ +.+..||.+.+. ++.++++
T Consensus 10 ~it~~~~~~~i---~~~~~~iv~f~~~~Cp~C~~~~P~l~~~~~~~~---~~~y~vdvd~~~~~~~~~~~~~~~~~~~~~ 83 (122)
T TIGR01295 10 VTTVVRALEAL---DKKETATFFIGRKTCPYCRKFSGTLSGVVAQTK---APIYYIDSENNGSFEMSSLNDLTAFRSRFG 83 (122)
T ss_pred ecCHHHHHHHH---HcCCcEEEEEECCCChhHHHHhHHHHHHHHhcC---CcEEEEECCCccCcCcccHHHHHHHHHHcC
Confidence 56777888877 457789999999999999999999999999832 678888887543 4556654
Q ss_pred ----ccccCCcEEEEcCCccccccCC-CCCHHHHHHHHH
Q psy12972 926 ----VGSQLPQIALLTDGRTSFFKEP-SFSVQKMVEFFR 959 (1578)
Q Consensus 926 ----V~~~~PTl~lf~~G~~~~y~~G-~~s~~~L~~fi~ 959 (1578)
|.+ .||+++|++|+.+....| ..+.++|.+|+.
T Consensus 84 i~~~i~~-~PT~v~~k~Gk~v~~~~G~~~~~~~l~~~~~ 121 (122)
T TIGR01295 84 IPTSFMG-TPTFVHITDGKQVSVRCGSSTTAQELQDIAA 121 (122)
T ss_pred CcccCCC-CCEEEEEeCCeEEEEEeCCCCCHHHHHHHhh
Confidence 555 999999999998877667 566889988863
No 185
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.89 E-value=6.9e-09 Score=125.80 Aligned_cols=132 Identities=17% Similarity=0.153 Sum_probs=87.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... .-.+.+|+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 123 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTV------------------------------------RRQICREI 123 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHH------------------------------------HHHHHHHH
Confidence 57999999999999965 799999999854321110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ +......+||||++|.+|.+... .+...+...+.+++ +..+|..|++|+|
T Consensus 124 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 193 (353)
T PLN00034 124 EILRDVN----HPNVVKCHDMF-DHNGEIQVLLEFMDGGSLEGTHI-----ADEQFLADVARQILSGIAYLHRRHIVHRD 193 (353)
T ss_pred HHHHhCC----CCCcceeeeEe-ccCCeEEEEEecCCCCccccccc-----CCHHHHHHHHHHHHHHHHHHHHCCEeecC
Confidence 5555543 22223333333 23345679999999998875421 22233333333333 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 194 lkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 194 IKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred CCHHHEEEcCCCCEEEccccccee
Confidence 999999975 599999997643
No 186
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=98.88 E-value=8.5e-09 Score=123.11 Aligned_cols=136 Identities=15% Similarity=0.082 Sum_probs=86.3
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||||+.+...... ..+. . .+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~--------------------------~-------~~~~e~~ 47 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDV--------------------------E-------CTMVERR 47 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhH--------------------------H-------HHHHHHH
Confidence 5899999999999965 68999999987543210 0000 0 0011211
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.. ..+++. +.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~l~~----~~~hp~i~~~~~~~~-~~~~~~lv~e~~~gg~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~d 121 (316)
T cd05592 48 VLAL----AWEHPFLTHLFCTFQ-TKEHLFFVMEYLNGGDLMFHIQ-SSGRFDEARARFYAAEIICGLQFLHKKGIIYRD 121 (316)
T ss_pred HHHh----ccCCCCccceeeEEE-cCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 1111 112332 22222221 2234579999999999876532 233466666555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nill~~~~~~kL~Dfg~a~ 144 (316)
T cd05592 122 LKLDNVLLDKDGHIKIADFGMCK 144 (316)
T ss_pred CCHHHeEECCCCCEEEccCcCCe
Confidence 999999975 59999999764
No 187
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=98.88 E-value=5.9e-09 Score=125.35 Aligned_cols=138 Identities=14% Similarity=0.062 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+++.||||+...+.... ..-.
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 56 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATAS------------------------------------EHKA 56 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchH------------------------------------HHHH
Confidence 6799999999999974 246789999876432110 0012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------- 536 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------- 536 (1578)
+.+|.+.+.++. +++. +.+-..+......-+++|||++|.+|.+......
T Consensus 57 ~~~E~~~l~~l~----~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (338)
T cd05102 57 LMSELKILIHIG----NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSR 132 (338)
T ss_pred HHHHHHHHHHhc----cCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhc
Confidence 345555555553 2232 2222222222233579999999999987643111
Q ss_pred ------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---e
Q psy12972 537 ------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---W 575 (1578)
Q Consensus 537 ------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~ 575 (1578)
..++...+...+.++. +..+|..|++|+|+||.|||+. .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~ 212 (338)
T cd05102 133 VDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNV 212 (338)
T ss_pred cccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCc
Confidence 1233444444444544 7889999999999999999975 4
Q ss_pred eEEecCCchhh
Q psy12972 576 LYPVDLGDKFR 586 (1578)
Q Consensus 576 v~liDfG~~~~ 586 (1578)
++++|||....
T Consensus 213 ~kl~DfG~a~~ 223 (338)
T cd05102 213 VKICDFGLARD 223 (338)
T ss_pred EEEeecccccc
Confidence 89999997643
No 188
>KOG0594|consensus
Probab=98.88 E-value=7.1e-09 Score=120.19 Aligned_cols=143 Identities=18% Similarity=0.225 Sum_probs=91.5
Q ss_pred hhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+.|..++. +|.|++|.||+|+. .+|+.||+|.++-..++ +. .|.. .
T Consensus 11 ~~~~~~ek--lGeGtyg~Vykar~~~~g~~VALKkirl~~~~----------------EG-~P~t------------a-- 57 (323)
T KOG0594|consen 11 FDYEKVEK--LGEGTYGVVYKARSKRTGKFVALKKIRLEFEE----------------EG-VPST------------A-- 57 (323)
T ss_pred HHHHHHHH--hCCCCceEEEEEEEecCCCEEEEEEEeccccc----------------cC-CCch------------h--
Confidence 44555544 99999999999995 48999999998744331 00 1111 1
Q ss_pred HHhHHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLP-YVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFT 550 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~ 550 (1578)
.+|..-+++++ +.. .|..-.++...+. .-.||+||++- .+.+...... .|++...+-..+.+
T Consensus 58 ----iREisllk~L~----~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Q 128 (323)
T KOG0594|consen 58 ----IREISLLKRLS----HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQ 128 (323)
T ss_pred ----hHHHHHHHHhC----CCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHH
Confidence 22333333333 222 3455555543331 34589999953 4554433222 46776555555555
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++ +..+|.+|++|||+||.|||++ .++++|||.+.
T Consensus 129 ll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 129 LLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred HHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 55 7789999999999999999965 58999999875
No 189
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.88 E-value=9e-09 Score=122.98 Aligned_cols=137 Identities=16% Similarity=0.089 Sum_probs=84.9
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+........ . ..+.++..|..
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---~-------------------------------~~~~~~~~e~~ 47 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK---K-------------------------------KEQNHIMAERN 47 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---h-------------------------------hHHHHHHHHHH
Confidence 5899999999999975 78999999986432110 0 00011111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
. +...+.+...+.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~---~l~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 V---LLKNLKHPFLVGLHYSFQ-TAEKLYFVLDYVNGGELFFHLQ-RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred H---HHHhCCCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 1 111222222222222221 2345679999999999865432 223455555544444444 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~ 144 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCK 144 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCc
Confidence 99999964 59999999653
No 190
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=98.88 E-value=9.1e-09 Score=123.17 Aligned_cols=136 Identities=14% Similarity=0.052 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-DDD---------------------------------VECTMVEK 51 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 57999999999999965 68899999987543110 000 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+..+. +.+. ++..+. ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~~~----~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH 124 (324)
T cd05587 52 RVLALPG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIY 124 (324)
T ss_pred HHHHhcC----CCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4444332 2222 232222 12345679999999999876532 223355555555555554 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||.|||+. .++++|||...
T Consensus 125 ~dlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05587 125 RDLKLDNVMLDAEGHIKIADFGMCK 149 (324)
T ss_pred cCCCHHHeEEcCCCCEEEeecCcce
Confidence 99999999975 58999999753
No 191
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=98.88 E-value=8.5e-09 Score=123.10 Aligned_cols=135 Identities=17% Similarity=0.139 Sum_probs=87.7
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.+ +|+.||||+.++..... ..+.. ....|.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~---------------------------------~~~~e~~ 47 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-DDDVE---------------------------------CTMVEKR 47 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-cchHH---------------------------------HHHHHHH
Confidence 5899999999999976 79999999987643210 00000 0122333
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+... . +++ .+++++. .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 48 ~l~~~---~-~~~--~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 48 VLALA---W-ENP--FLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQ-DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred HHHhc---c-CCC--CccCeeEEEEeCCEEEEEECCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 33221 1 222 2233332 22344579999999998876532 223466666555555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCK 144 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCe
Confidence 9999999975 58999999754
No 192
>TIGR00411 redox_disulf_1 small redox-active disulfide protein 1. This protein is homologous to a family of proteins that includes thioredoxins, glutaredoxins, protein-disulfide isomerases, and others, some of which have several such domains. The sequence of this protein at the redox-active disufide site, CPYC, matches glutaredoxins rather than thioredoxins, although its overall sequence seems closer to thioredoxins. It is suggested to be a ribonucleotide-reducing system component distinct from thioredoxin or glutaredoxin.
Probab=98.88 E-value=6.6e-09 Score=98.32 Aligned_cols=80 Identities=19% Similarity=0.293 Sum_probs=69.9
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHH
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
.+..||++||++|+.+.|.++++++.++.. +.+..||+++++++++++|+.+ +||+++ +|+. ...|..+.++|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-vPt~~~--~g~~--~~~G~~~~~~l~ 75 (82)
T TIGR00411 2 KIELFTSPTCPYCPAAKRVVEEVAKEMGDA-VEVEYINVMENPQKAMEYGIMA-VPAIVI--NGDV--EFIGAPTKEELV 75 (82)
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCc-eEEEEEeCccCHHHHHHcCCcc-CCEEEE--CCEE--EEecCCCHHHHH
Confidence 367899999999999999999999998765 8999999999999999999998 999986 7753 345888899999
Q ss_pred HHHHhh
Q psy12972 956 EFFRLK 961 (1578)
Q Consensus 956 ~fi~~~ 961 (1578)
+++.+.
T Consensus 76 ~~l~~~ 81 (82)
T TIGR00411 76 EAIKKR 81 (82)
T ss_pred HHHHhh
Confidence 988764
No 193
>KOG1165|consensus
Probab=98.87 E-value=5.5e-09 Score=118.59 Aligned_cols=132 Identities=17% Similarity=0.181 Sum_probs=101.2
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.||||..+.|+ +-++++||||.-.-. .+.+.+ +.|.
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-------------------------S~APQL--------------rdEY 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-------------------------SEAPQL--------------RDEY 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEecccc-------------------------CCcchH--------------HHHH
Confidence 468999999999998 679999999964211 111112 3333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-CCC-ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-KSS-TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-~~t-~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+-.+ .+.+ ..-||.||.- -|+ .++||||.+ |.+|.|+..++.+.++.+.|+...++++ ++.+|.+.+|-
T Consensus 75 r~YK----lL~g--~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIY 147 (449)
T KOG1165|consen 75 RTYK----LLGG--TEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIY 147 (449)
T ss_pred HHHH----HHcC--CCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceee
Confidence 3333 3332 2457888731 233 479999999 9999999999999999999999888888 78899999999
Q ss_pred cCCCCCCCCCCe--------eEEecCCchhh
Q psy12972 564 ADPHSGNDVNTW--------LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~~--------v~liDfG~~~~ 586 (1578)
||+||.|+|+++ +++||||++-+
T Consensus 148 RDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 148 RDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred cccCccceeecCCCCCCCceEEEEeccchhh
Confidence 999999999873 89999998754
No 194
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=98.87 E-value=6.1e-09 Score=125.70 Aligned_cols=136 Identities=16% Similarity=0.176 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... . ...-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~--------------------------------~~~~~~~~e~ 52 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK--R--------------------------------NQIAHVRAER 52 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh--c--------------------------------cHHHHHHHHH
Confidence 56999999999999975 79999999986431100 0 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+..+. ++. +++++.. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH 124 (350)
T cd05573 53 DILADAD-----SPW--IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLI-RKDVFPEETARFYIAELVLALDSVHKLGFIH 124 (350)
T ss_pred HHHHhcC-----CCC--ccchhhheecCCeEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4444432 221 2222221 2344689999999999987643 224566666655555555 78999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 125 ~Dlkp~NIll~~~~~~kL~Dfg~~~~ 150 (350)
T cd05573 125 RDIKPDNILIDADGHIKLADFGLCKK 150 (350)
T ss_pred cCCCHHHeEECCCCCEEeecCCCCcc
Confidence 99999999965 589999997643
No 195
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.87 E-value=6.4e-09 Score=126.44 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-.. . .+.. -.+.+|.
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~--------------------------~~~~------~~~~~E~ 52 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML--E--------------------------KEQV------AHVRAER 52 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh--h--------------------------hhHH------HHHHHHH
Confidence 67999999999999975 7999999998632100 0 0000 1223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~il~~l~----h~~iv~~~~~~-~~~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~D 126 (364)
T cd05599 53 DILAEAD----NPWVVKLYYSF-QDENYLYLIMEYLPGGDMMTLLM-KKDTFTEEETRFYIAETILAIDSIHKLGYIHRD 126 (364)
T ss_pred HHHHhCC----CCCCcceEEEE-EcCCeEEEEECCCCCcHHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 4444432 22222222222 22345689999999999987643 233456666655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|||+. .++++|||....
T Consensus 127 lkp~NIl~~~~~~~kl~Dfg~~~~ 150 (364)
T cd05599 127 IKPDNLLLDAKGHIKLSDFGLCTG 150 (364)
T ss_pred CCHHHeEECCCCCEEEeeccccee
Confidence 999999965 589999997543
No 196
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=98.87 E-value=8.1e-09 Score=123.98 Aligned_cols=137 Identities=15% Similarity=0.024 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.+ +|+.||||+.+..-.. + . ...-++.+|+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~---~---------------------------~~~~~~~~E~ 69 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL----K---M---------------------------KQVQHVAQEK 69 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----h---h---------------------------hhHHHHHHHH
Confidence 68999999999999976 7999999998642100 0 0 0001234565
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 70 ~~l~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d 143 (329)
T PTZ00263 70 SILMELS----HPFIVNMMCSFQ-DENRVYFLLEFVVGGELFTHLR-KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRD 143 (329)
T ss_pred HHHHhCC----CCCCCcEEEEEE-cCCEEEEEEcCCCCChHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 5555543 222233323332 2345689999999999877532 223345444444444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 144 lkp~NIll~~~~~~kl~Dfg~~~ 166 (329)
T PTZ00263 144 LKPENLLLDNKGHVKVTDFGFAK 166 (329)
T ss_pred CCHHHEEECCCCCEEEeeccCce
Confidence 999999975 58999999764
No 197
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=98.87 E-value=8.8e-09 Score=123.34 Aligned_cols=136 Identities=13% Similarity=0.065 Sum_probs=89.4
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||+|+.+...... . .....+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~--------------------------------~~~~~~~~E~~ 47 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--K--------------------------------DEVAHTVTESR 47 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh--h--------------------------------HHHHHHHHHHH
Confidence 5899999999999964 79999999987532110 0 00012344555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~l~~l~----hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dl 121 (323)
T cd05595 48 VLQNTR----HPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 121 (323)
T ss_pred HHHhCC----CCCCcceeeEE-ecCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 554442 22222222222 22345689999999999866532 223456555555555554 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 122 kp~NIll~~~~~~kL~Dfg~~~ 143 (323)
T cd05595 122 KLENLMLDKDGHIKITDFGLCK 143 (323)
T ss_pred CHHHEEEcCCCCEEecccHHhc
Confidence 99999975 59999999653
No 198
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=98.87 E-value=1.2e-08 Score=122.50 Aligned_cols=136 Identities=17% Similarity=0.095 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... ..+ . -.+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------~------~~~~~e~ 46 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD-DED---------------------------I------DWVQTEK 46 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------H------HHHHHHH
Confidence 35899999999999965 78999999987542110 000 0 0123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +++. |+.++. ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 47 ~~~~~~~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ivH 119 (327)
T cd05617 47 HVFEQAS----SNPF--LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQ-RQRKLPEEHARFYAAEICIALNFLHERGIIY 119 (327)
T ss_pred HHHHhhc----CCCC--EeeEEEEEEeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 4443332 2332 233332 22345679999999999876532 234566666555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .++++|||...
T Consensus 120 rDlkp~Nili~~~~~~kl~Dfg~~~ 144 (327)
T cd05617 120 RDLKLDNVLLDADGHIKLTDYGMCK 144 (327)
T ss_pred cCCCHHHEEEeCCCCEEEeccccce
Confidence 99999999964 59999999653
No 199
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=98.87 E-value=1.3e-08 Score=121.31 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=88.8
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|+.. +|+.||||+........ . .....+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-~---------------------------------~~~~~~~~E~~~ 46 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS-R---------------------------------SEVTHTLAERTV 46 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-h---------------------------------hHHHHHHHHHHH
Confidence 689999999999975 68999999876321100 0 001123445555
Q ss_pred HHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.++. ++. +.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDl 119 (312)
T cd05585 47 LAQVN-----CPFIVPLKFSF-QSPEKLYLVLAFINGGELFHHLQ-REGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119 (312)
T ss_pred HHhCC-----CCcEeceeeEE-ecCCeEEEEEcCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 55442 232 2222222 22345689999999999977643 233466666655555544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 120 kp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 120 KPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred CHHHeEECCCCcEEEEECcccc
Confidence 99999964 59999999753
No 200
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.86 E-value=1.2e-08 Score=122.73 Aligned_cols=139 Identities=13% Similarity=0.075 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-... . .....+..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~---------------------------------~~~~~~~~e~ 52 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLK-R---------------------------------AETACFREER 52 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHh-h---------------------------------HHHHHHHHHH
Confidence 57999999999999965 78999999875311000 0 0001123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+... +++.+....-+..-....+|||||++|..|.++..-....++...+...+.+++ ++.+|..|++|+|
T Consensus 53 ~~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrD 127 (331)
T cd05624 53 NVLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRD 127 (331)
T ss_pred HHHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 322222 223222111111223446799999999999887543234556555544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 128 lkp~Nill~~~~~~kl~DfG~a~~ 151 (331)
T cd05624 128 IKPDNVLLDMNGHIRLADFGSCLK 151 (331)
T ss_pred CchHHEEEcCCCCEEEEeccceee
Confidence 999999975 589999997543
No 201
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.86 E-value=1e-08 Score=122.88 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|..+ +|+.||||+.+...... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDD---------------------------------VECTMVEK 51 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 67999999999999865 79999999986432100 000 01123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+... .+.+. ++.++. ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~~----~~~~~--i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 124 (323)
T cd05615 52 RVLALQ----DKPPF--LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEISVGLFFLHRRGIIY 124 (323)
T ss_pred HHHHhc----cCCCc--hhheeeEEecCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 433322 22332 222221 12234579999999999876532 223466666666555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|+|||+. .++++|||...
T Consensus 125 rDikp~Nill~~~~~ikL~Dfg~~~ 149 (323)
T cd05615 125 RDLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred cCCCHHHeEECCCCCEEEecccccc
Confidence 99999999965 58999999754
No 202
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=98.86 E-value=1.2e-08 Score=122.09 Aligned_cols=137 Identities=14% Similarity=0.064 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ..+ ...+..|.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~ 51 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-DDD---------------------------------VECTMVEK 51 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------------HHHHHHHH
Confidence 56999999999999865 68899999987542110 000 00112233
Q ss_pred HHHHHHHHhhCCCCCee-ecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVY-IPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~-vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+... .+++.+. +-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 52 ~~l~~~----~~~~~i~~~~~~~-~~~~~~~lv~E~~~~g~L~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 125 (323)
T cd05616 52 RVLALS----GKPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYQIQ-QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYR 125 (323)
T ss_pred HHHHhc----cCCCeEeeEEEEE-ecCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 333222 2333322 21222 22234579999999999876532 223466666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 126 Dlkp~Nill~~~~~~kL~DfG~~~ 149 (323)
T cd05616 126 DLKLDNVMLDSEGHIKIADFGMCK 149 (323)
T ss_pred CCCHHHeEECCCCcEEEccCCCce
Confidence 9999999975 58999999653
No 203
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.86 E-value=6.3e-09 Score=125.46 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=88.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|.. .+|+.||||+.......... .-.+.+|.
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------------------------~~~~~~E~ 65 (343)
T cd07878 21 TPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIH-----------------------------------ARRTYREL 65 (343)
T ss_pred eecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHH-----------------------------------HHHHHHHH
Confidence 6899999999999986 47899999987643211100 00122344
Q ss_pred HHHHHHHHhhCCCCCeeecEEe-----eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRIL-----WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~-----~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+..++ .+.....+++||+. |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 66 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 66 RLLKHMK----HENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIV--KCQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred HHHHhcC----CCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4444432 11112222111 11223457999998 66776653 344577776666665555 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 167 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCcccee
Confidence 99999999999965 599999997643
No 204
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.86 E-value=1.2e-08 Score=117.81 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=93.7
Q ss_pred cccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 411 IAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 411 lasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
||.|++|.||+|+.+ +|..||||+..+...... .-+|.+|+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~------------------------------------~~~~~~E~ 46 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSV------------------------------------RDEMMREA 46 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHH------------------------------------HHHHHHHH
Confidence 899999999999864 466799998865432110 01245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+-++++ .+...+.+..+.. ....++||||++|.+|.+........++...+...+.++. +..+|..|++|+|
T Consensus 47 ~~l~~l----~h~~ii~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 120 (257)
T cd05115 47 EIMHQL----DNPYIVRMIGVCE--AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRD 120 (257)
T ss_pred HHHHhc----CCCCeEEEEEEEc--CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecc
Confidence 656554 2333344444432 2456899999999999887543344567777766666655 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 121 lkp~nil~~~~~~~kl~dfg~~~~ 144 (257)
T cd05115 121 LAARNVLLVNQHYAKISDFGLSKA 144 (257)
T ss_pred cchheEEEcCCCcEEeccCCcccc
Confidence 999999965 488999997643
No 205
>KOG0550|consensus
Probab=98.85 E-value=2.2e-09 Score=124.76 Aligned_cols=72 Identities=40% Similarity=0.587 Sum_probs=65.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
-+...|+|.|||+++.++..|||+|||++++.||||++.. .+++.+|+++.+||.+|+||.+|..||..-..
T Consensus 369 kSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~dsg~dl 442 (486)
T KOG0550|consen 369 KSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDSGQDL 442 (486)
T ss_pred HhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhcccccch
Confidence 3456899999999999999999999999999999999874 57888999999999999999999999986554
No 206
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=98.85 E-value=1.2e-08 Score=122.37 Aligned_cols=137 Identities=18% Similarity=0.136 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .+-.+..|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------~~------~~~~~~~e~ 52 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----------------------------QE------TVSFFEEER 52 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------hh------HHHHHHHHH
Confidence 57999999999999965 79999999986432100 00 001123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+. +++. +.+-..+. .....+|||||++|..|.++..-....++...+...+.+++ ++.+|..|++|+
T Consensus 53 ~i~~~~-----~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~ 126 (330)
T cd05601 53 DILSIS-----NSPWIPQLQYAFQ-DKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126 (330)
T ss_pred HHHHhC-----CCCCCcceeeEEe-cCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 333332 2222 22222222 23456899999999999887543324566655555554444 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 127 Dlkp~NIll~~~~~~kL~Dfg~a~ 150 (330)
T cd05601 127 DIKPENVLIDRTGHIKLADFGSAA 150 (330)
T ss_pred cCchHheEECCCCCEEeccCCCCe
Confidence 9999999965 58999999764
No 207
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=98.85 E-value=1.4e-08 Score=119.13 Aligned_cols=139 Identities=16% Similarity=0.064 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|.. .+|+.||||+........ ...+..+.+|.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 51 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh----------------------------------hhhHHHHHHHH
Confidence 5799999999999996 589999999875432110 00112344566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. ....-++||||++|.+|.+..... ..+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~ 126 (285)
T cd05631 52 RILEKVN----SRFVVSLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYR 126 (285)
T ss_pred HHHHhcC----CCcEEEEEEEEc-cCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 6666553 222233333332 234567999999999997653221 23466666655555554 778999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 127 dikp~Nill~~~~~~kl~Dfg~~~~ 151 (285)
T cd05631 127 DLKPENILLDDRGHIRISDLGLAVQ 151 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCcEE
Confidence 9999999975 589999997643
No 208
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.85 E-value=1.6e-08 Score=110.51 Aligned_cols=132 Identities=19% Similarity=0.183 Sum_probs=93.7
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
|++|+.|+||+++.. +|++++||+.++..... .+-.+.+|.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------------------------------~~~~~~~e~~~ 44 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------------------------------LLEELLREIEI 44 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------------------------------HHHHHHHHHHH
Confidence 689999999999976 49999999987664321 11234566666
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
++++.. ..+|+++... .+..+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 45 ~~~l~~-------~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~d 117 (215)
T cd00180 45 LKKLNH-------PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117 (215)
T ss_pred HHhcCC-------CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 666543 3445554333 3478899999999999887432212566666555555544 6889999999999
Q ss_pred CCCCCCCCC----eeEEecCCchh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 118 l~~~ni~~~~~~~~~~l~d~~~~~ 141 (215)
T cd00180 118 LKPENILLDSDNGKVKLADFGLSK 141 (215)
T ss_pred CCHhhEEEeCCCCcEEEecCCceE
Confidence 999999954 37888888653
No 209
>cd03003 PDI_a_ERdj5_N PDIa family, N-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is comprised of the first TRX domain of ERdj5 located after the DnaJ domain at the N-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation.
Probab=98.85 E-value=6.8e-10 Score=109.74 Aligned_cols=78 Identities=19% Similarity=0.381 Sum_probs=57.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~ 825 (1578)
..++..+|+..+. ..++|+|.||||||+||+++.|.|+++|+.+++. .++.++|..+. +|+..++.
T Consensus 4 ~~l~~~~f~~~v~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~vd~~~~~~~~~~~~v~--------- 71 (101)
T cd03003 4 VTLDRGDFDAAVN---SGEIWFVNFYSPRCSHCHDLAPTWREFAKEMDGVIRIGAVNCGDDRMLCRSQGVN--------- 71 (101)
T ss_pred EEcCHhhHHHHhc---CCCeEEEEEECCCChHHHHhHHHHHHHHHHhcCceEEEEEeCCccHHHHHHcCCC---------
Confidence 3456778888773 3489999999999999999999999999999865 44555554322 44444444
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
.+||+.+|+.|.
T Consensus 72 ----~~Pt~~~~~~g~ 83 (101)
T cd03003 72 ----SYPSLYVFPSGM 83 (101)
T ss_pred ----ccCEEEEEcCCC
Confidence 449988888664
No 210
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=98.85 E-value=1.2e-08 Score=122.43 Aligned_cols=137 Identities=16% Similarity=0.090 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... .+ .. .+..|.
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------~~------~~~~E~ 46 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-ED---------------------------ID------WVQTEK 46 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-hH---------------------------HH------HHHHHH
Confidence 36899999999999965 789999999865321100 00 00 112333
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+. .+++. +.+-..+ ...+..+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~l~~~----~~hp~iv~~~~~~-~~~~~~~lv~E~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 47 HVFEQA----SNHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred HHHHhc----CCCCcCCceeeEE-EeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 322222 12332 2222222 22356789999999998876532 234566665555555544 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~ 144 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCK 144 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccc
Confidence 9999999975 59999999753
No 211
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=98.85 E-value=1.4e-08 Score=121.92 Aligned_cols=136 Identities=17% Similarity=0.086 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.+ +|+.||||+.+...... ..+ .+ .+..|..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------~~------~~~~e~~ 47 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-DED---------------------------ID------WVQTEKH 47 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhH---------------------------HH------HHHHHHH
Confidence 5899999999999965 78999999987532110 000 00 1223333
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+++. +.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~----~~hp~Iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~d 121 (329)
T cd05588 48 VFETA----SNHPFLVGLHSCF-QTESRLFFVIEFVSGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNFLHERGIIYRD 121 (329)
T ss_pred HHHhc----cCCCCCCceEEEE-EcCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 33332 22332 2222222 22345689999999999876532 234566666655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nili~~~~~~kL~Dfg~~~ 144 (329)
T cd05588 122 LKLDNVLLDAEGHIKLTDYGMCK 144 (329)
T ss_pred CCHHHeEECCCCCEEECcCcccc
Confidence 999999975 58999999653
No 212
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=98.85 E-value=9e-09 Score=121.24 Aligned_cols=136 Identities=21% Similarity=0.202 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-... ....-.+.+|.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~E~ 52 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----------------------------------LKQEQHVHNEK 52 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----------------------------------hHHHHHHHHHH
Confidence 67999999999999975 79999999875321000 00011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. + +. |.+++... ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~l~----h-p~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 124 (291)
T cd05612 53 RVLKEVS----H-PF--IIRLFWTEHDQRFLYMLMEYVPGGELFSYLR-NSGRFSNSTGLFYASEIVCALEYLHSKEIVY 124 (291)
T ss_pred HHHHhCC----C-Cc--HhhhHhhhccCCeEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4444432 1 21 22222211 234579999999999987643 223455555555555544 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 125 ~dlkp~NIli~~~~~~kl~Dfg~~~~ 150 (291)
T cd05612 125 RDLKPENILLDKEGHIKLTDFGFAKK 150 (291)
T ss_pred cCCCHHHeEECCCCCEEEEecCcchh
Confidence 99999999965 599999997643
No 213
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.85 E-value=7.8e-09 Score=121.96 Aligned_cols=148 Identities=18% Similarity=0.138 Sum_probs=96.4
Q ss_pred HhCCChhhhccccCC-------cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCC
Q psy12972 394 DFGCTHSQLFRSFDE-------NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFD 465 (1578)
Q Consensus 394 ~lG~~~~~iF~~fd~-------~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~ 465 (1578)
++|.+.+-++...++ ..||.|++|+||+|+.. +|+.||||+..-...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------------------------- 58 (292)
T cd06657 4 QFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ------------------------- 58 (292)
T ss_pred HhhhhceEeecCCChHHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-------------------------
Confidence 344444444444444 45999999999999875 899999997532110
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHH
Q psy12972 466 FQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVD 545 (1578)
Q Consensus 466 ~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~ 545 (1578)
..+-.+.+|...+.++. +..-+.....+.. ....++||||++|.++.++. .....+...+.
T Consensus 59 ------------~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~ 119 (292)
T cd06657 59 ------------QRRELLFNEVVIMRDYQ----HENVVEMYNSYLV-GDELWVVMEFLEGGALTDIV--THTRMNEEQIA 119 (292)
T ss_pred ------------hHHHHHHHHHHHHHhcC----CcchhheeeEEEe-CCEEEEEEecCCCCcHHHHH--hcCCCCHHHHH
Confidence 01112344544444432 2222333333322 34578999999999998763 33455666665
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+.+++ ++.+|..|++|+|++|.||+++ .++++|||...
T Consensus 120 ~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~ 164 (292)
T cd06657 120 AVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 164 (292)
T ss_pred HHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccce
Confidence 5555555 7889999999999999999975 58999999654
No 214
>KOG0720|consensus
Probab=98.85 E-value=2.4e-09 Score=125.83 Aligned_cols=69 Identities=39% Similarity=0.669 Sum_probs=65.7
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|.+|||+.++|.++|||.||++|...|||||..+.|++.|+.++.||++|+|+++|+.||.....
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~~k 302 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLELKK 302 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999999999975443
No 215
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.85 E-value=1.3e-08 Score=124.67 Aligned_cols=136 Identities=13% Similarity=0.023 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . .+ ..-.+..|.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~-------~---------------------~~------~~~~~~~E~ 52 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL-------L---------------------RN------QVAHVKAER 52 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh-------h---------------------HH------HHHHHHHHH
Confidence 57999999999999964 7899999987532100 0 00 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. -....+|||||++|..|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~il~~~~----h~~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrD 126 (382)
T cd05625 53 DILAEAD----NEWVVRLYYSFQ-DKDNLYFVMDYIPGGDMMSLLI-RMGIFPEDLARFYIAELTCAVESVHKMGFIHRD 126 (382)
T ss_pred HHHHhCC----CCcCCeEEEEEE-eCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 5444432 222222222222 1234689999999998877632 222344444433444443 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 127 lKp~NILl~~~g~~kL~DFGla 148 (382)
T cd05625 127 IKPDNILIDRDGHIKLTDFGLC 148 (382)
T ss_pred CCHHHEEECCCCCEEEeECCCC
Confidence 999999964 5899999975
No 216
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.85 E-value=8.8e-09 Score=121.91 Aligned_cols=135 Identities=21% Similarity=0.224 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ....+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 54 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------------------------------TPFTAIREA 54 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------------------------------cchhHHHHH
Confidence 67999999999999976 79999999875321100 001223455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+..++.+ ....++||||++|. +.+.......+++.+.+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 128 (303)
T cd07869 55 SLLKGL----KHANIVLLHDIIHT-KETLTLVFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD 128 (303)
T ss_pred HHHhhC----CCCCcCeEEEEEec-CCeEEEEEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 555444 23333444444432 34568999999763 3333222224567777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 129 lkp~Nill~~~~~~kl~Dfg~~~ 151 (303)
T cd07869 129 LKPQNLLISDTGELKLADFGLAR 151 (303)
T ss_pred CCHHHEEECCCCCEEECCCCcce
Confidence 999999965 58999999753
No 217
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=98.84 E-value=1.5e-08 Score=121.40 Aligned_cols=138 Identities=17% Similarity=0.082 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... + ......+.
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~---~------------------------------~~~~~~~~ 48 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR---N------------------------------QKDTAHTK 48 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh---h------------------------------hhhHHHHH
Confidence 4689999999999985 368999999986421100 0 00112345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|.+.++++. +...+.+-..+. .....+|||||++|.+|.+... ....+....+...+.+++ +..+|..|++
T Consensus 49 ~E~~il~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 49 AERNILEAVK----HPFIVDLIYAFQ-TGGKLYLILEYLSGGELFMHLE-REGIFMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHHHHHHhCC----CCchhceeeEEe-cCCeEEEEEeCCCCchHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5666665553 222222222222 2345689999999999977532 222344444444444444 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 123 H~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 123 YRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred cCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 999999999975 59999999753
No 218
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=98.84 E-value=2e-08 Score=117.58 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=89.6
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|..+ +|+.||||+......... ...-.+..|.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~----------------------------------~~~~~~~~E~~i 46 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR----------------------------------KGYEGAMVEKRI 46 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhh----------------------------------HHHHHHHHHHHH
Confidence 689999999999865 899999998753211000 000123456665
Q ss_pred HHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 490 AERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 490 ~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++. ++. +.+-..+ ......+|||||++|.+|.+.... ....++...+...+.+++ +..+|..|++|
T Consensus 47 l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 47 LAKVH-----SRFIVSLAYAF-QTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred HHhCC-----CCcEeeeeEEE-cCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 55542 232 2222222 223456899999999999765321 123456666655555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~ 146 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVE 146 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCcccee
Confidence 99999999975 489999997643
No 219
>PTZ00062 glutaredoxin; Provisional
Probab=98.83 E-value=1.9e-08 Score=111.34 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=77.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.+.|.+.+. +..+..+++|+|+||++|+.+.|.+.++++++.. +.|+.||++ |+|.+ +||+++|++
T Consensus 5 ~~ee~~~~i~--~~~g~~vl~f~a~w~~~C~~m~~vl~~l~~~~~~--~~F~~V~~d--------~~V~~-vPtfv~~~~ 71 (204)
T PTZ00062 5 KKEEKDKLIE--SNTGKLVLYVKSSKEPEYEQLMDVCNALVEDFPS--LEFYVVNLA--------DANNE-YGVFEFYQN 71 (204)
T ss_pred CHHHHHHHHh--cCCCcEEEEEeCCCCcchHHHHHHHHHHHHHCCC--cEEEEEccc--------cCccc-ceEEEEEEC
Confidence 3445555552 2247889999999999999999999999999864 899999986 99998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+.+....| .++..|.+++.+....
T Consensus 72 g~~i~r~~G-~~~~~~~~~~~~~~~~ 96 (204)
T PTZ00062 72 SQLINSLEG-CNTSTLVSFIRGWAQK 96 (204)
T ss_pred CEEEeeeeC-CCHHHHHHHHHHHcCC
Confidence 998887766 5789999999988754
No 220
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.82 E-value=2.4e-08 Score=119.87 Aligned_cols=136 Identities=20% Similarity=0.179 Sum_probs=85.9
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|+.+ +|+.||||+...... ... .+. ..+..|...
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~---~~~------------------------~~~-------~~~~~e~~~ 46 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI---VAK------------------------KEV-------AHTIGERNI 46 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHH---hhh------------------------hHH-------HHHHHHHHH
Confidence 689999999999965 799999999742110 000 000 001112222
Q ss_pred HHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.. +.+++. ++.++. +..+..+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~~~--~~~~p~--i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrD 121 (330)
T cd05586 47 LVRTL--LDESPF--IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQ-KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRD 121 (330)
T ss_pred HHHhc--cCCCCc--CcceEEEEecCCeEEEEEcCCCCChHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 22111 112332 233322 22345689999999999876532 234466666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 122 lkp~Nili~~~~~~kl~Dfg~a~ 144 (330)
T cd05586 122 LKPENILLDATGHIALCDFGLSK 144 (330)
T ss_pred CCHHHeEECCCCCEEEecCCcCc
Confidence 999999965 58999999753
No 221
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=98.82 E-value=2.1e-08 Score=122.76 Aligned_cols=135 Identities=18% Similarity=0.163 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-. ...+ .. -.+.+|.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~--------------------------~~------~~~~~E~ 52 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKD--------------------------QL------AHVKAER 52 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhH--------------------------HH------HHHHHHH
Confidence 67999999999999864 899999998753210 0000 00 1134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++. |++++.. -....+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|
T Consensus 53 ~il~~l~-----hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~ql~~aL~~LH~~givH 124 (377)
T cd05629 53 DVLAESD-----SPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI-KYDTFSEDVTRFYMAECVLAIEAVHKLGFIH 124 (377)
T ss_pred HHHHhCC-----CCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5444432 222 3333322 2345689999999999987642 223455554444444444 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||++ .++++|||...
T Consensus 125 rDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 125 RDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred cCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999964 58888998653
No 222
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.82 E-value=1.1e-08 Score=130.85 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=93.7
Q ss_pred cCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 406 FDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 406 fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
...+.||.|++|.||+|.. .++.+++|+..+.....- + +... ...-.+.+
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~--~--------------------------~~~~-~~~~~~~~ 385 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHP--E--------------------------LDER-LRTERTRA 385 (535)
T ss_pred CccceeccCCcEEEEEEee-cCccceeEEEecccccch--h--------------------------HHHH-HHHHHHHH
Confidence 3457899999999999986 455677776543211100 0 0000 11124678
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccC
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHAD 565 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~D 565 (1578)
|++.+.+++. +.+.+|.++.......+|||||++|.+|.+... ....++..+.+. +..+|..|++|+|
T Consensus 386 E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~-L~~lH~~giiHrD 453 (535)
T PRK09605 386 EARLLSEARR-----AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVGEI-VAKLHKAGIVHGD 453 (535)
T ss_pred HHHHHHhhcc-----cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHHHH-HHHHHhCCCccCC
Confidence 8888888753 456677777655567899999999999987642 123455555543 6789999999999
Q ss_pred CCCCCCCCC--eeEEecCCch
Q psy12972 566 PHSGNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~ 584 (1578)
+||+|||+. .++++|||..
T Consensus 454 lkp~NILl~~~~~~liDFGla 474 (535)
T PRK09605 454 LTTSNFIVRDDRLYLIDFGLG 474 (535)
T ss_pred CChHHEEEECCcEEEEeCccc
Confidence 999999963 4777777754
No 223
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=98.82 E-value=1.6e-08 Score=118.89 Aligned_cols=135 Identities=18% Similarity=0.166 Sum_probs=86.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... ...+.+|.
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 54 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------------------------------PCTAIREV 54 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc------------------------------------chhHHHHH
Confidence 57999999999999965 789999998753211000 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....-++||||++| .+.+........++...+...+.++. +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~d 128 (288)
T cd07871 55 SLLKNLK----HANIVTLHDIIH-TERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRD 128 (288)
T ss_pred HHHHhCC----CCCEeeEEEEEc-CCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554442 222233222321 22335799999987 66554322222345555554444444 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 129 lkp~Nil~~~~~~~kl~DfG~~~ 151 (288)
T cd07871 129 LKPQNLLINEKGELKLADFGLAR 151 (288)
T ss_pred CCHHHEEECCCCCEEECcCccee
Confidence 999999975 59999999764
No 224
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=98.82 E-value=1.1e-08 Score=119.11 Aligned_cols=143 Identities=16% Similarity=0.145 Sum_probs=93.0
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+.|..+ +.||+|++|.||+|... +|+.||||+.........
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~----------------------------------- 45 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDE----------------------------------- 45 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHH-----------------------------------
Confidence 3445544 56999999999999865 689999998753221100
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-++.+|++.+.++. +..-+.+...+ ......+|||||++|.++.+.. ....++...+...+.++. +..+
T Consensus 46 -~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~i~~~l~~l 117 (277)
T cd06642 46 -IEDIQQEITVLSQCD----SPYITRYYGSY-LKGTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYL 117 (277)
T ss_pred -HHHHHHHHHHHHcCC----CCccHhhhccc-ccCCceEEEEEccCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 013455555555442 11111111122 1234568999999999987763 344556565555555544 6788
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|..|++|+|++|.||++. .+++.|||....+
T Consensus 118 H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06642 118 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred hcCCeeccCCChheEEEeCCCCEEEccccccccc
Confidence 999999999999999965 4899999976443
No 225
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=98.81 E-value=1.9e-08 Score=119.17 Aligned_cols=134 Identities=16% Similarity=0.131 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|+.|++|.||+|+.. +|+.||||+..+..... . . ..-++..|.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~--------------------------~-------~~~~~~~e~ 52 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL-R--------------------------N-------QIQQVFVER 52 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh-H--------------------------H-------HHHHHHHHH
Confidence 67999999999999975 68999999875432100 0 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCce--EEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTR--VLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~--VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++ .|++++..++++. +|||||++|.+|.++..- ...++...+...+.+++ +..+|..|++|
T Consensus 53 ~~l~~~~-----~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 53 DILTFAE-----NP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHhCC-----CC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4444332 22 3455665444444 899999999999877431 22344444444444443 68899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+|+||+||+++ .++++|||..
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~ 148 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLS 148 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCc
Confidence 99999999976 5899999965
No 226
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=98.81 E-value=1.7e-08 Score=120.91 Aligned_cols=139 Identities=16% Similarity=0.067 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++..... .+ + . -.+..|.
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~--~~-------------------------~-~------~~l~~e~ 50 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA--RD-------------------------E-V------ESLMCEK 50 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh--hh-------------------------H-H------HHHHHHH
Confidence 56899999999999865 79999999987542100 00 0 0 0122233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+-++.++ .+.+...+.+-..+ ......+|||||++|..|... +....++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~~~~~~-~l~hp~i~~~~~~~-~~~~~~~lv~E~~~~~~L~~~--~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 51 RIFETAN-SERHPFLVNLFACF-QTEDHVCFVMEYAAGGDLMMH--IHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred HHHHhcc-ccCCCChhceeeEE-EcCCEEEEEEcCCCCCcHHHH--hhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 3332222 12222223333333 223456899999999988654 3344567666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCc
Confidence 999999975 59999999653
No 227
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.81 E-value=2.1e-08 Score=122.65 Aligned_cols=137 Identities=14% Similarity=0.078 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-... . ...-.+..|.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~---------------------------------~~~~~~~~e~ 94 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-R---------------------------------SDSAFFWEER 94 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-h---------------------------------hhHHHHHHHH
Confidence 67999999999999975 79999999985321000 0 0001133444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+. +...+.+...+ ......+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+|
T Consensus 95 ~il~~~~----h~~iv~~~~~~-~~~~~~~lv~Ey~~gg~L~~~l--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (370)
T cd05596 95 DIMAHAN----SEWIVQLHYAF-QDDKYLYMVMEYMPGGDLVNLM--SNYDIPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (370)
T ss_pred HHHHhCC----CCCcceEEEEE-ecCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 4443332 22223333332 2234468999999999998763 444566655555444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 Lkp~NILl~~~~~~kL~DfG~~~~ 191 (370)
T cd05596 168 VKPDNMLLDKSGHLKLADFGTCMK 191 (370)
T ss_pred CCHHHEEEcCCCCEEEEeccceee
Confidence 999999975 599999997643
No 228
>cd02963 TRX_DnaJ TRX domain, DnaJ domain containing protein family; composed of uncharacterized proteins of about 500-800 amino acids, containing an N-terminal DnaJ domain followed by one redox active TRX domain. DnaJ is a member of the 40 kDa heat-shock protein (Hsp40) family of molecular chaperones, which regulate the activity of Hsp70s. TRX is involved in the redox regulation of many protein substrates through the reduction of disulfide bonds. TRX has been implicated to catalyse the reduction of Hsp33, a chaperone holdase that binds to unfolded protein intermediates. The presence of DnaJ and TRX domains in members of this family suggests that they could be involved in a redox-regulated chaperone network.
Probab=98.81 E-value=1.3e-09 Score=109.82 Aligned_cols=80 Identities=38% Similarity=0.705 Sum_probs=58.6
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec---ccCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD---LFGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~---~~~~~~~i~g~~~~~~~ 824 (1578)
.+++..+|.+.++..+.+++|+|.||||||++|+.+.|.|+++++.+.+.++.+..++++ .++...++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~d~~~~l~~~~~V~~------- 79 (111)
T cd02963 7 YSLTFSQYENEIVPKSFKKPYLIKITSDWCFSCIHIEPVWKEVIQELEPLGVGIATVNAGHERRLARKLGAHS------- 79 (111)
T ss_pred heeeHHHHHHhhccccCCCeEEEEEECCccHhHHHhhHHHHHHHHHHHhcCceEEEEeccccHHHHHHcCCcc-------
Confidence 345667888888777788999999999999999999999999999998654433333322 2444444443
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
+||+.+|..|
T Consensus 80 ------~Pt~~i~~~g 89 (111)
T cd02963 80 ------VPAIVGIING 89 (111)
T ss_pred ------CCEEEEEECC
Confidence 4888887755
No 229
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.81 E-value=2.1e-08 Score=122.54 Aligned_cols=137 Identities=13% Similarity=0.047 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+....-... .. ..-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~---------------------------------~~~~~~~e~ 94 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-RS---------------------------------DSAFFWEER 94 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hh---------------------------------hHHHHHHHH
Confidence 56999999999999976 68999999875311000 00 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+ ......+|||||++|..|.++. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 95 ~i~~~~----~hp~iv~~~~~~-~~~~~~~lv~Ey~~gg~L~~~l--~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrD 167 (370)
T cd05621 95 DIMAFA----NSPWVVQLFCAF-QDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRD 167 (370)
T ss_pred HHHHhC----CCCCEeeEEEEE-EcCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 333332 222222222222 2234468999999999998864 344566555555444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 LKp~NILl~~~~~~kL~DFG~a~~ 191 (370)
T cd05621 168 VKPDNMLLDKHGHLKLADFGTCMK 191 (370)
T ss_pred CCHHHEEECCCCCEEEEeccccee
Confidence 999999975 599999997643
No 230
>KOG0663|consensus
Probab=98.80 E-value=1.3e-08 Score=116.01 Aligned_cols=138 Identities=17% Similarity=0.214 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-|+.||+|.||||+.+ +++-||+|-.+++-++. .|.+.. .+|.
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~--------------------GFPIts---------------LREI 126 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE--------------------GFPITS---------------LREI 126 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC--------------------CCcchh---------------HHHH
Confidence 56899999999999965 89999999776654221 122111 2333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.-+.+++ |...|.|-+|+-.-. .+-+|||||++- .|..+..--...+...++--.+.+++ ++.+|.+.++||
T Consensus 127 niLl~~~----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHR 201 (419)
T KOG0663|consen 127 NILLKAR----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHR 201 (419)
T ss_pred HHHHhcC----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEec
Confidence 3444443 445577777764433 234699999964 33333222234567777777777776 889999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|+|.. -+++.|||.++.
T Consensus 202 DLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 202 DLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ccchhheeeccCCcEEecccchhhh
Confidence 9999999954 477788886643
No 231
>PRK12274 serine/threonine protein kinase; Provisional
Probab=98.80 E-value=1.5e-08 Score=112.17 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.+++++||.|+.+.- +|++|+.+.. .. + .|.++.+... =|++|++
T Consensus 8 ~~l~~~~f~~v~~~~~-~~~k~~~~~l----~~----~--------------------~~~~~~~~~~-----l~~rE~~ 53 (218)
T PRK12274 8 EPLKSDTFGRILLVRG-GERKFVRRDL----SA----A--------------------PWWLRGVAWW-----LARREAL 53 (218)
T ss_pred eeecCCCcceEEEeec-CCceeeeccc----cc----c--------------------hhhhhhHHHH-----HHHHHHH
Confidence 6799999999997755 6777765522 11 0 0111111111 2478888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC-C
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP-H 567 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp-H 567 (1578)
.++++.. ...+|+++.- ....++|||++|.+|..... . ....+...+.+ .++++|..|++|+|+ +
T Consensus 54 iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~--~---~~~~~~~qi~~-~L~~lH~~GIvHrDL~k 119 (218)
T PRK12274 54 ALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPP--R---GDLAYFRAARR-LLQQLHRCGVAHNDLAK 119 (218)
T ss_pred HHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhh--h---hhHHHHHHHHH-HHHHHHHCcCccCCCCC
Confidence 8887742 2457888742 56799999999999865321 1 11233444443 477899999999999 6
Q ss_pred CCCCCCC---eeEEecCCch
Q psy12972 568 SGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~ 584 (1578)
|+|||++ .+++||||..
T Consensus 120 p~NILv~~~g~i~LIDFG~A 139 (218)
T PRK12274 120 EANWLVQEDGSPAVIDFQLA 139 (218)
T ss_pred cceEEEcCCCCEEEEECCCc
Confidence 9999964 4777777754
No 232
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.80 E-value=4e-08 Score=117.23 Aligned_cols=152 Identities=20% Similarity=0.193 Sum_probs=101.7
Q ss_pred HHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHH
Q psy12972 391 FLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWV 469 (1578)
Q Consensus 391 ~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 469 (1578)
...-++.++++.|... +.||.|++|+||+|+.. +|+.||||+....-...
T Consensus 15 ~~~~~~~~~~~~f~~~--~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~--------------------------- 65 (317)
T cd06635 15 AELFFKEDPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS--------------------------- 65 (317)
T ss_pred HHHhcCCCchhhhhhh--heeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc---------------------------
Confidence 3456778888888865 67999999999999965 78999999875321100
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH
Q psy12972 470 INELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF 549 (1578)
Q Consensus 470 ~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~ 549 (1578)
. ....++..|++.+.++. +...+.+...+. .....+|||||+.| ++.+........++...+...+.
T Consensus 66 -~------~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~ 132 (317)
T cd06635 66 -N------EKWQDIIKEVKFLQRIK----HPNSIEYKGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITH 132 (317)
T ss_pred -h------HHHHHHHHHHHHHHhCC----CCCEEEEEEEEe-eCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHH
Confidence 0 01123455655555442 222233333332 23457899999987 55555433344566666666555
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+++ +..+|..|++|+|++|+||++. .++++|||..
T Consensus 133 ~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 133 GALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred HHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 555 6788999999999999999965 4899999965
No 233
>KOG0658|consensus
Probab=98.80 E-value=3.9e-09 Score=122.22 Aligned_cols=136 Identities=21% Similarity=0.217 Sum_probs=85.8
Q ss_pred CCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 407 DENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.+-+|+||||.||+|.+. ++++||||=..|+-+-. .+
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-----------------------------------------nr 66 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-----------------------------------------NR 66 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-----------------------------------------cH
Confidence 4478999999999999976 67999999665543211 11
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCc-eE---EEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSST-RV---LTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~V---LVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
|..-+. .+.|...|..=.-+..-++. .+ |||||+ ..+|.+.... .+..++.-++--...++| +..+
T Consensus 67 El~im~----~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL 141 (364)
T KOG0658|consen 67 ELQIMR----KLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL 141 (364)
T ss_pred HHHHHH----hcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH
Confidence 222222 11222223332223222222 33 899999 4566655331 123444444444444555 7789
Q ss_pred HHcCccccCCCCCCCCCC----eeEEecCCchhhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT----WLYPVDLGDKFRLV 588 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~----~v~liDfG~~~~l~ 588 (1578)
|.+|++|||+||.|||+. .+++.|||++.+++
T Consensus 142 h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 142 HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV 177 (364)
T ss_pred HhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence 999999999999999964 59999999986554
No 234
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.80 E-value=5.8e-09 Score=112.04 Aligned_cols=66 Identities=30% Similarity=0.494 Sum_probs=57.0
Q ss_pred CCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCChh----HHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 637 LDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 637 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
.|+|++||+++. ++..+|+++||++++++|||+..... +...+..||+||++|+||.+|+.|+..-
T Consensus 2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l 73 (166)
T PRK01356 2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL 73 (166)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence 589999999985 78999999999999999999986432 2245789999999999999999998543
No 235
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.79 E-value=2.5e-08 Score=122.01 Aligned_cols=137 Identities=15% Similarity=0.057 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+....-... ..+ .-.+..|.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~-~~~---------------------------------~~~~~~e~ 94 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSD---------------------------------SAFFWEER 94 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh-hHH---------------------------------HHHHHHHH
Confidence 67999999999999976 78999999975311000 000 01123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+. -....+|||||++|.+|.++. ....++...+...+.+++ ++.+|..|++|+|
T Consensus 95 ~i~~~~----~hp~iv~~~~~~~-~~~~~~lv~Ey~~gg~L~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 167 (371)
T cd05622 95 DIMAFA----NSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 167 (371)
T ss_pred HHHHhC----CCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence 433332 2222222222221 223467999999999998763 445566655554444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 168 Lkp~NIll~~~~~ikL~DfG~a~~ 191 (371)
T cd05622 168 VKPDNMLLDKSGHLKLADFGTCMK 191 (371)
T ss_pred CCHHHEEECCCCCEEEEeCCceeE
Confidence 999999975 599999997643
No 236
>cd02951 SoxW SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation. Sulfur bacteria oxidize sulfur compounds to provide reducing equivalents for carbon dioxide fixation during autotrophic growth and the respiratory electron transport chain. It is unclear what the role of SoxW is, since it has been found to be dispensable in the oxidation of thiosulfate to sulfate. SoxW is specifically kept in the reduced state by SoxV, which is essential in thiosulfate oxidation.
Probab=98.79 E-value=1e-08 Score=105.47 Aligned_cols=89 Identities=15% Similarity=0.253 Sum_probs=73.6
Q ss_pred CC-CcEEEEEEcCCCcccccccHHHH---HHHHHhCCCceEEEEEECccc-------------hhhHhHcCccccCCcEE
Q psy12972 872 YT-TPHLILFYSDWCFACLQVEPIFK---KLMDELSPLGVGFFTVHVHNE-------------QGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 872 ~~-~~~LV~FyapwCg~Ck~l~p~~~---~lA~~l~~~~v~~a~VDc~~~-------------~~L~~k~gV~~~~PTl~ 934 (1578)
.. ++++|.||++||++|+.+.|.+. .+...+++ ++.+..||.+.+ .+++++|+|.+ +||++
T Consensus 12 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~i~~d~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~ 89 (125)
T cd02951 12 DGKKPLLLLFSQPGCPYCDKLKRDYLNDPAVQAYIRA-HFVVVYINIDGDKEVTDFDGEALSEKELARKYRVRF-TPTVI 89 (125)
T ss_pred cCCCcEEEEEeCCCCHHHHHHHHHhcCcHHHHHHHHh-heEEEEEEccCCceeeccCCCCccHHHHHHHcCCcc-ccEEE
Confidence 45 89999999999999999999885 56666654 388899998764 68999999998 99999
Q ss_pred EEcC--CccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTD--GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~--G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ |+......|..+.+.+.+++...+
T Consensus 90 ~~~~~gg~~~~~~~G~~~~~~~~~~l~~~~ 119 (125)
T cd02951 90 FLDPEGGKEIARLPGYLPPDEFLAYLEYVQ 119 (125)
T ss_pred EEcCCCCceeEEecCCCCHHHHHHHHHHHH
Confidence 9975 477767778888888888887654
No 237
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.79 E-value=5.9e-09 Score=112.68 Aligned_cols=64 Identities=27% Similarity=0.503 Sum_probs=56.7
Q ss_pred CCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 637 LDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 637 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
.|||++|||++. ++..+|+++||++++++|||+.... .+.+.+..||+||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999985 7889999999999999999997532 245689999999999999999999985
No 238
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=98.79 E-value=2.7e-08 Score=115.95 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=96.4
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
++.|..+ +.||+|++|+||+|+.. +|+.||||+....... .
T Consensus 3 ~~~y~~~--~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~------------------------------------~ 44 (277)
T cd06640 3 EELFTKL--ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE------------------------------------D 44 (277)
T ss_pred HHhhhhh--hhcccCCCeEEEEEEEccCCEEEEEEEEeccccH------------------------------------H
Confidence 3444444 56999999999999975 6899999987421100 0
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
..-++.+|++.+.++. +...+.+...+.+ ....+|||||++|.+|.+.. ....++...+...+.+++ +..+
T Consensus 45 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~i--~~~~l~~~~~~~~~~~l~~~l~~l 117 (277)
T cd06640 45 EIEDIQQEITVLSQCD----SPYVTKYYGSYLK-GTKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYL 117 (277)
T ss_pred HHHHHHHHHHHHHhCC----CCCEeeEEEEEEE-CCEEEEEEecCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1123455655554442 2222333333322 34678999999999998763 345566666666555555 6788
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|..|++|+|++|+||++. .++++|||....+
T Consensus 118 h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 118 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred HhCCccCcCCChhhEEEcCCCCEEEcccccceec
Confidence 999999999999999965 4899999976443
No 239
>KOG0575|consensus
Probab=98.79 E-value=2.3e-08 Score=122.11 Aligned_cols=139 Identities=18% Similarity=0.145 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||-|++|+||+|+. .+|+.||+||.....- . .. ..+..+.+|+
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l---~-----------------k~--------~~reKv~~EI------ 69 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLL---K-----------------KP--------KQREKVLNEI------ 69 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHh---c-----------------Cc--------chHHHHHHHH------
Confidence 5699999999999996 7999999999742110 0 00 0011121221
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+...++|...|.+-.-+. -++.-+||.|.++-.+|..+.. ++..++..++...+.+++ +..+|.+|++|||
T Consensus 70 ----eIHr~L~HpnIV~f~~~FE-Ds~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 70 ----EIHRSLKHPNIVQFYHFFE-DSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred ----HHHHhcCCCcEEeeeeEee-cCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 2233344444344433332 2334459999999999988765 456677777777777776 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++-|||++. .|++-|||.+.++
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~l 168 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQL 168 (592)
T ss_pred cchhheeecCcCcEEecccceeeee
Confidence 999999976 4888888876554
No 240
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.79 E-value=2.9e-08 Score=113.93 Aligned_cols=134 Identities=19% Similarity=0.148 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...+|+.||||+...+... +-+|..|.+
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS--------------------------------------EEDFIEEAQ 51 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC--------------------------------------HHHHHHHHH
Confidence 679999999999999888899999987543210 123456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ ...+..+++|||++|..|.+........++.+.+...+.+++ +..+|..|++|+|+
T Consensus 52 ~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl 126 (256)
T cd05112 52 VMMKLS----HPKLVQLYGVC-TERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDL 126 (256)
T ss_pred HHHhCC----CCCeeeEEEEE-ccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 666653 22212222222 233567899999999999876432223355555555444444 67789999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 127 ~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 127 AARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred ccceEEEcCCCeEEECCCccee
Confidence 99999975 48899999754
No 241
>KOG0582|consensus
Probab=98.78 E-value=2.3e-08 Score=117.74 Aligned_cols=130 Identities=21% Similarity=0.236 Sum_probs=94.1
Q ss_pred cccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|.-|+||+|+ .+.|+.||||+.. +++ ...|+. ..+.|.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~in--LEk-c~~~ld---------------------------------~l~kE~ 75 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIIN--LEK-CNNDLD---------------------------------ALRKEV 75 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEee--hhh-hhhhHH---------------------------------HHHHHH
Confidence 457888889999999 5588999999763 111 111111 135666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.++..+. +| .++..+| ..-++||-|+.|+++.|+.. .-..|++...++..+.+++ +..+|.+
T Consensus 76 ~~msl~~-----HP-----NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~ 145 (516)
T KOG0582|consen 76 QTMSLID-----HP-----NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN 145 (516)
T ss_pred HHhhhcC-----CC-----CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 6766553 23 2222222 34479999999999999754 3356888888888887777 8999999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|.+|||+|+||||++ .|++-|||..
T Consensus 146 G~IHRdvKAgnILi~~dG~VkLadFgvs 173 (516)
T KOG0582|consen 146 GHIHRDVKAGNILIDSDGTVKLADFGVS 173 (516)
T ss_pred CceecccccccEEEcCCCcEEEcCceee
Confidence 999999999999964 6999999965
No 242
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=98.78 E-value=3e-08 Score=118.33 Aligned_cols=136 Identities=17% Similarity=0.131 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+++. .+|+.||||+.+...... .....+.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------~~~~~~~ 46 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-----------------------------------RDRVRTK 46 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-----------------------------------hhHHHHH
Confidence 4689999999999874 368999999986421100 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|++.+.++. +..-+.+-..+ ......+|||||++|..|.+... ....++...+...+.+++ +..+|..|++
T Consensus 47 ~E~~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 120 (318)
T cd05582 47 MERDILAEVN----HPFIVKLHYAF-QTEGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELALALDHLHSLGII 120 (318)
T ss_pred HHHHHHHhCC----CCCcccEEEEE-EcCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5666555542 22222222222 12345679999999998876532 233466666665555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 121 H~dlkp~Nil~~~~~~~kL~Dfg~~~ 146 (318)
T cd05582 121 YRDLKPENILLDEEGHIKLTDFGLSK 146 (318)
T ss_pred cCCCCHHHeEECCCCcEEEeeccCCc
Confidence 999999999975 58999999754
No 243
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.77 E-value=3.2e-08 Score=118.90 Aligned_cols=136 Identities=13% Similarity=0.151 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|..||+|+.+...... .. -.+.+|.
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~------------------------------~~------~~~~~E~ 54 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPA------------------------------IR------NQIIREL 54 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHH------------------------------HH------HHHHHHH
Confidence 56999999999999976 79999999986543211 00 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++. +..-+.+-..+.. ....+|||||++|.+|.++.. ....++...+...+.++. +..+|. +|++|+
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~ 128 (331)
T cd06649 55 QVLHECN----SPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 128 (331)
T ss_pred HHHHHCC----CCCCCeEEEEEEE-CCEEEEEeecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcC
Confidence 5555542 2222333333322 345689999999999988743 223455555555444444 566776 479999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 129 dlkp~Nil~~~~~~~kl~Dfg~~~~ 153 (331)
T cd06649 129 DVKPSNILVNSRGEIKLCDFGVSGQ 153 (331)
T ss_pred CCChhhEEEcCCCcEEEccCccccc
Confidence 9999999965 589999997643
No 244
>KOG0032|consensus
Probab=98.77 E-value=2.6e-08 Score=121.16 Aligned_cols=138 Identities=20% Similarity=0.146 Sum_probs=101.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|.+|+||+++.+ +|+++|+|+........-. ..-+.++|.
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------------------------------~~~~v~~Ev 86 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------------------------------DREDVRREV 86 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------------------------------cHHHHHHHH
Confidence 67999999999999977 5999999998532211000 223567788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++.. +...|.++.+|.. .+.-.||||+++|..|-|...-. +.+..+.+..+.++. ++++|..|++|+|
T Consensus 87 ~il~~l~~---hpniv~l~~~~e~-~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrD 160 (382)
T KOG0032|consen 87 AILQQLSG---HPNIVQLKDAFED-PDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRD 160 (382)
T ss_pred HHHHhccC---CCCEEEEEEEEEc-CCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceecc
Confidence 88877753 4455788888743 34568999999999998864322 477666666555555 7899999999999
Q ss_pred CCCCCCCCC-------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-------~v~liDfG~~~~ 586 (1578)
++|.|+|.. .++++|||....
T Consensus 161 lKpEN~L~~~~~~~~~~ik~~DFGla~~ 188 (382)
T KOG0032|consen 161 LKPENLLLASKDEGSGRIKLIDFGLAKF 188 (382)
T ss_pred CCHHHeeeccccCCCCcEEEeeCCCceE
Confidence 999999932 589999997643
No 245
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.77 E-value=3e-08 Score=119.87 Aligned_cols=137 Identities=18% Similarity=0.024 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEecC--CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE--GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~--G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.++ +..||||+........ . ...-.+.+|
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~----------------------------~------~~~~~~~~E 81 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK----------------------------Q------KQVDHVFSE 81 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh----------------------------h------hhHHHHHHH
Confidence 689999999999998653 4689999875321000 0 000123456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
++.+.++. +...+.+-..+. .....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 82 ~~~l~~l~----hp~Iv~~~~~~~-~~~~~~lv~Ey~~~g~L~~~i~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 155 (340)
T PTZ00426 82 RKILNYIN----HPFCVNLYGSFK-DESYLYLVLEFVIGGEFFTFLR-RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYR 155 (340)
T ss_pred HHHHHhCC----CCCCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcc
Confidence 65555543 222233323322 2244679999999999987643 233455555444444443 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|||+. .++++|||...
T Consensus 156 DLkp~NILl~~~~~ikL~DFG~a~ 179 (340)
T PTZ00426 156 DLKPENLLLDKDGFIKMTDFGFAK 179 (340)
T ss_pred CCCHHHEEECCCCCEEEecCCCCe
Confidence 9999999975 48999999764
No 246
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.77 E-value=3.2e-08 Score=115.04 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+...... + .-++..|.
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD---D---------------------------------VSDIQREV 50 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCch---h---------------------------------HHHHHHHH
Confidence 5799999999999996 589999999876432210 0 01234566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++.. ..++. +.+...+ .-.+..+|||||++|.+|.++. ....++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~~--~~~~~vi~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~ 125 (277)
T cd06917 51 ALLSQLRQ--SQPPNITKYYGSY-LKGPRLWIIMEYAEGGSVRTLM--KAGPIAEKYISVIIREVLVALKYIHKVGVIHR 125 (277)
T ss_pred HHHHHhcc--CCCCCeeeEeeee-eeCCEEEEEEecCCCCcHHHHH--HccCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 66666643 12332 2232322 2235568999999999998763 334566555555444444 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||+++ .++++|||....
T Consensus 126 dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06917 126 DIKAANILVTNTGNVKLCDFGVAAL 150 (277)
T ss_pred CcCHHHEEEcCCCCEEEccCCceee
Confidence 9999999965 588999996543
No 247
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.77 E-value=2.2e-08 Score=118.89 Aligned_cols=135 Identities=18% Similarity=0.158 Sum_probs=87.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... +..+.+|+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc------------------------------------chhHHHHH
Confidence 67999999999999965 789999998754321100 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....+|||||++| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~d 129 (309)
T cd07872 56 SLLKDLK----HANIVTLHDIVH-TDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRD 129 (309)
T ss_pred HHHHhCC----CCCcceEEEEEe-eCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555542 333333333332 23456899999987 45443221222345555544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 130 lkp~Nill~~~~~~kl~Dfg~~~ 152 (309)
T cd07872 130 LKPQNLLINERGELKLADFGLAR 152 (309)
T ss_pred CCHHHEEECCCCCEEECccccce
Confidence 999999975 48999999764
No 248
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=98.77 E-value=3.7e-08 Score=115.32 Aligned_cols=138 Identities=15% Similarity=0.053 Sum_probs=92.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~------------------------------------~~~~ 53 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH------------------------------------IADL 53 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHH------------------------------------HHHH
Confidence 4589999999999974 3688999998875432110 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|.+.++++ .+...+.+.....+. ....+|||||++|.+|.++..-....++...+...+.++. +..+|..|
T Consensus 54 ~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 54 KKEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555555554 233334444443332 1235799999999999887432222356666666555555 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccc
Confidence 99999999999964 488889986643
No 249
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=98.77 E-value=2.9e-08 Score=115.06 Aligned_cols=135 Identities=13% Similarity=0.140 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+++ .+..||+|+.+.+.... .+.+|.
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~------------------------------------~~~~~~ 54 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK------------------------------------QRRGFL 54 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH------------------------------------HHHHHH
Confidence 56999999999999864 46799999876542110 012345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++ .+..-+.+-..+. .....+|||||++|..|.++.......++...+...+.+++ +..+|..|++
T Consensus 55 ~e~~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ii 129 (266)
T cd05064 55 AEALTLGQF----DHSNIVRLEGVIT-RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYV 129 (266)
T ss_pred HHHHHHhcC----CCCCcCeEEEEEe-cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 566555543 2333344433332 23456899999999999887543233466666665555554 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .+++.|||..
T Consensus 130 H~dikp~nili~~~~~~~l~dfg~~ 154 (266)
T cd05064 130 HKGLAAHKVLVNSDLVCKISGFRRL 154 (266)
T ss_pred eccccHhhEEEcCCCcEEECCCccc
Confidence 999999999965 3788899864
No 250
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.77 E-value=3.5e-08 Score=111.94 Aligned_cols=135 Identities=22% Similarity=0.300 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|... +|+.|++|+.++.... ..-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------------~~~~~~~e~ 48 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE-------------------------------------KKEKIINEI 48 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh-------------------------------------HHHHHHHHH
Confidence 68999999999999976 7999999998764321 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. ++. ++.++. ......+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 49 ~~l~~l~-----~~~--i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h 121 (253)
T cd05122 49 QILKKCK-----HPN--IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIH 121 (253)
T ss_pred HHHHhCC-----CCC--EeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEec
Confidence 5444443 222 233332 123567899999999999887543324677777776666665 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|++|+||++. .++++|||....+
T Consensus 122 ~dl~p~ni~i~~~~~~~l~d~~~~~~~ 148 (253)
T cd05122 122 RDIKAANILLTSDGEVKLIDFGLSAQL 148 (253)
T ss_pred CCCCHHHEEEccCCeEEEeeccccccc
Confidence 99999999965 5899999976443
No 251
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=98.76 E-value=2.6e-08 Score=122.01 Aligned_cols=138 Identities=13% Similarity=0.051 Sum_probs=89.4
Q ss_pred CcccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
.+.||.|++|.||+|+. .++..||||+.++..... .+-
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~------------------------------------~~~ 83 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLT------------------------------------ERE 83 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcH------------------------------------HHH
Confidence 37899999999999973 246789999987542210 001
Q ss_pred hHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------------------------
Q psy12972 482 DFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------ 536 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------ 536 (1578)
.+.+|.+.+..+. .++. +.+-... ......+|||||++|.+|.+...-..
T Consensus 84 ~~~~Ei~il~~l~----~HpnIv~l~~~~-~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (375)
T cd05104 84 ALMSELKVLSYLG----NHINIVNLLGAC-TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQR 158 (375)
T ss_pred HHHHHHHHHHHhc----CCcceeeeeeee-ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhh
Confidence 2345666666552 2232 2222222 22355789999999998876532110
Q ss_pred --------------------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 537 --------------------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 537 --------------------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++...+...+.++. +..+|..|++|+
T Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 238 (375)
T cd05104 159 EMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHR 238 (375)
T ss_pred cccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 1234444444444444 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .+++.|||....
T Consensus 239 Dlkp~Nill~~~~~~kl~DfG~a~~ 263 (375)
T cd05104 239 DLAARNILLTHGRITKICDFGLARD 263 (375)
T ss_pred CCchhhEEEECCCcEEEecCcccee
Confidence 9999999965 478999997643
No 252
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=98.76 E-value=4.1e-08 Score=115.22 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... -..+..+.+|+
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK----------------------------------RKGESMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh----------------------------------hhHHHHHHHHH
Confidence 56999999999999864 79999999875432110 00112235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+. .....+++|||++|..+.+..... ..+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~ 126 (285)
T cd05632 52 QILEKVN----SQFVVNLAYAYE-TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYR 126 (285)
T ss_pred HHHHHcC----CcCceeEEEEEe-cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 6666553 222233333332 223467999999999987664322 23567777666666655 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+||++. .++++|||...
T Consensus 127 dikp~Nili~~~~~~kl~Dfg~~~ 150 (285)
T cd05632 127 DLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEecCCcce
Confidence 9999999975 48999999764
No 253
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=98.76 E-value=4.5e-08 Score=114.10 Aligned_cols=142 Identities=17% Similarity=0.188 Sum_probs=97.2
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
++++|..+ +.||+|++|.||+|+.. +|+.||||+.......
T Consensus 2 ~~~~~~~~--~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~------------------------------------ 43 (277)
T cd06641 2 PEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE------------------------------------ 43 (277)
T ss_pred HHHhhhhh--eeEeecCCeEEEEEEECCCCcEEEEEEeccccch------------------------------------
Confidence 35666666 46999999999999864 7899999986421100
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
...-++.+|...+.++. +..-+.+...+. .....+|||||++|.++.++ +....++...+...+.+++ +..
T Consensus 44 ~~~~~~~~e~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~--i~~~~~~~~~~~~~~~~l~~~l~~ 116 (277)
T cd06641 44 DEIEDIQQEITVLSQCD----SPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDL--LEPGPLDETQIATILREILKGLDY 116 (277)
T ss_pred HHHHHHHHHHHHHHhcC----CCCEeEEEEEEE-eCCeEEEEEEeCCCCcHHHH--HhcCCCCHHHHHHHHHHHHHHHHH
Confidence 00123456666665543 222233333332 23457899999999988776 3345567776666666555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|++|+||++. .++++|||...
T Consensus 117 lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred HccCCeecCCCCHHhEEECCCCCEEEeecccce
Confidence 8999999999999999965 48899999754
No 254
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.75 E-value=3e-08 Score=114.38 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|+.|.||+|...+++.||||..+++-.. +-+|.+|.+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD--------------------------------------PKDFLAEAQ 53 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc--------------------------------------HHHHHHHHH
Confidence 689999999999999888899999987653110 112455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +..-+.+-..+ ......+++|||++|.+|.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 128 (261)
T cd05068 54 IMKKLR----HPKLIQLYAVC-TLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRD 128 (261)
T ss_pred HHHHCC----CCCccceeEEE-ecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 666653 22222222222 22345689999999999988743211 2466666666666555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||+++ .++++|||....
T Consensus 129 l~p~Nil~~~~~~~~l~dfg~~~~ 152 (261)
T cd05068 129 LAARNVLVGENNICKVADFGLARV 152 (261)
T ss_pred CCcceEEEcCCCCEEECCcceEEE
Confidence 999999965 589999997643
No 255
>KOG1166|consensus
Probab=98.75 E-value=6.7e-09 Score=135.60 Aligned_cols=139 Identities=19% Similarity=0.140 Sum_probs=92.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+-+|-||.|+||+|+..+|+.|||||++|-.. ++.-+ ..++..+|. ..+..
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~----WEfYI--------------------~~q~~~RLk-----~~~~~ 754 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNP----WEFYI--------------------CLQVMERLK-----PQMLP 754 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCc----eeeee--------------------hHHHHHhhc-----hhhhc
Confidence 56899999999999988999999999999653 22111 111111111 00000
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
-...+... + + +.+.-||||||.+=++|-|+.. .....+..-++-..++++ ++++|..|+||||+
T Consensus 755 ~~~~~~~a-------~---~---~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDi 820 (974)
T KOG1166|consen 755 SIMHISSA-------H---V---FQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDI 820 (974)
T ss_pred chHHHHHH-------H---c---cCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccC
Confidence 00011100 0 1 3456789999999888888755 233444444555556655 89999999999999
Q ss_pred CCCCCCCC----------eeEEecCCchhhhhhh
Q psy12972 567 HSGNDVNT----------WLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 567 HPGNilv~----------~v~liDfG~~~~l~l~ 590 (1578)
||.|+|++ .+++||||..-.+.|.
T Consensus 821 KPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf 854 (974)
T KOG1166|consen 821 KPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF 854 (974)
T ss_pred CcceeEeecccCCCCcccceEEEecccceeeeEc
Confidence 99999966 3899999987666665
No 256
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.75 E-value=3.1e-08 Score=119.11 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +++.||||+...... .. .. ....|..|.
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~--------------------------~~------~~~~~~~e~ 52 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LK--------------------------RA------ETACFREER 52 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HH--------------------------hh------HHHHHHHHH
Confidence 57999999999999976 688999998742100 00 00 001123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+..+ +++. ++.++. ......+|||||++|.+|.++..-....++...+...+.++. +..+|..|++|
T Consensus 53 ~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 53 DVLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 333222 2222 223322 223456899999999999887542233455554444444444 67899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .++++|||...
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~ 150 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCL 150 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchhe
Confidence 99999999975 58999999754
No 257
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.75 E-value=4.6e-08 Score=112.46 Aligned_cols=135 Identities=16% Similarity=0.143 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.+++..||+|....+-. .+-+|.+|++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------------------------------~~~~~~~e~~ 51 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------------------------------SEEDFIEEAK 51 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc--------------------------------------cHHHHHHHHH
Confidence 56999999999999999988999997643210 0124556666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
-++++. +..-+.+...+ +.....++||||++|.+|.+........++...+...+.++. +..+|..|++|+|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 126 (256)
T cd05114 52 VMMKLS----HPKLVQLYGVC-TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDL 126 (256)
T ss_pred HHHHCC----CCCceeEEEEE-ccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 666653 22223333333 233456899999999999876432222355555555544444 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+||++. .+++.|||....
T Consensus 127 ~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 127 AARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred CcceEEEcCCCeEEECCCCCccc
Confidence 99999965 488999997643
No 258
>cd02952 TRP14_like Human TRX-related protein 14 (TRP14)-like family; composed of proteins similar to TRP14, a 14kD cytosolic protein that shows disulfide reductase activity in vitro with a different substrate specificity compared with another human cytosolic protein, TRX1. TRP14 catalyzes the reduction of small disulfide-containing peptides but does not reduce disulfides of ribonucleotide reductase, peroxiredoxin and methionine sulfoxide reductase, which are TRX1 substrates. TRP14 also plays a role in tumor necrosis factor (TNF)-alpha signaling pathways, distinct from that of TRX1. Its depletion promoted TNF-alpha induced activation of c-Jun N-terminal kinase and mitogen-activated protein kinases.
Probab=98.75 E-value=1.3e-08 Score=103.18 Aligned_cols=81 Identities=19% Similarity=0.363 Sum_probs=67.4
Q ss_pred cccccceecccCCCCcEEEEEEc-------CCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------chhhHhHcC
Q psy12972 860 HWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------EQGLARRLG 925 (1578)
Q Consensus 860 ~~nF~~~vl~~s~~~~~LV~Fya-------pwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------~~~L~~k~g 925 (1578)
.++|.+.+.. ..+++++|.||| +||++|+.+.|.+++++..+.+. +.|++||++. +.+++.+++
T Consensus 9 ~~~f~~~i~~-~~~~~vvV~F~A~~~~~~~~WC~pCr~~~P~l~~l~~~~~~~-v~fv~Vdvd~~~~w~d~~~~~~~~~~ 86 (119)
T cd02952 9 YEEFLKLLKS-HEGKPIFILFYGDKDPDGQSWCPDCVKAEPVVREALKAAPED-CVFIYCDVGDRPYWRDPNNPFRTDPK 86 (119)
T ss_pred HHHHHHHHHh-cCCCeEEEEEEccCCCCCCCCCHhHHhhchhHHHHHHHCCCC-CEEEEEEcCCcccccCcchhhHhccC
Confidence 3556665543 236799999999 99999999999999999999754 8999999976 458999999
Q ss_pred cc-ccCCcEEEEcCCcccc
Q psy12972 926 VG-SQLPQIALLTDGRTSF 943 (1578)
Q Consensus 926 V~-~~~PTl~lf~~G~~~~ 943 (1578)
|. + .||+++|++|+...
T Consensus 87 I~~~-iPT~~~~~~~~~l~ 104 (119)
T cd02952 87 LTTG-VPTLLRWKTPQRLV 104 (119)
T ss_pred cccC-CCEEEEEcCCceec
Confidence 98 8 99999998876544
No 259
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=98.75 E-value=5e-08 Score=111.59 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+|+.||||+....... + ..-.|.+|.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~------------------------------~------~~~~~~~e~~ 44 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP------------------------------D------LKRKFLQEAE 44 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH------------------------------H------HHHHHHHHHH
Confidence 468999999999999877999999976532211 0 0112345555
Q ss_pred HHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.++++ . ++.+ .+-..+ .-....++||||++|.++.+...-.....+...+...+.++. +..+|..|++|+|
T Consensus 45 ~l~~l----~-~~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 45 ILKQY----D-HPNIVKLIGVC-VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred HHHhC----C-CCCeEEEEEEE-ecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 44443 2 2322 222222 234567899999999999876432233456555555555544 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~ 142 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSRE 142 (251)
T ss_pred cCcceEEEcCCCcEEEeecccccc
Confidence 999999975 599999997643
No 260
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.75 E-value=1.2e-08 Score=118.54 Aligned_cols=92 Identities=34% Similarity=0.623 Sum_probs=76.4
Q ss_pred hhhhHHHHHHhhhhhhh-----hccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC------hhHHHHHHHHH
Q psy12972 615 FNLIMLWYTFLLNVLFI-----NCAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND------PTAQEKFLQLT 683 (1578)
Q Consensus 615 ~~l~~lw~~~~l~~~~~-----~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~------~~a~~~f~~i~ 683 (1578)
.-.+..|.++.+...-+ ..-...|||+|||++.+++..+||++||+|+.++||||.+. ..-++.+.+|+
T Consensus 71 If~ivgWl~i~~L~~~I~~~k~~~~~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~It 150 (610)
T COG5407 71 IFTIVGWLVISYLISNIRTLKIEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTIT 150 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHH
Confidence 33456787666444322 23445799999999999999999999999999999999764 34678899999
Q ss_pred HHHHHcCCHHHHHhccccCCCCC
Q psy12972 684 EAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 684 ~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
+||+.|+|...|..|-.+|+.++
T Consensus 151 kAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 151 KAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred HHHHhhhhHHHHHHHHhcCCCCC
Confidence 99999999999999999999875
No 261
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.75 E-value=4.6e-08 Score=111.87 Aligned_cols=138 Identities=22% Similarity=0.244 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|...+ +..||||+.++..... ..-++.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~ 44 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE------------------------------------ERKDFL 44 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh------------------------------------HHHHHH
Confidence 468999999999999763 8899999987653221 011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--HH
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.|++.+.++. +...+.+-..+.+ ...-.|+|||++|.+|.+...-. ...++...+...+.+++ +.
T Consensus 45 ~e~~~l~~~~----~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 45 KEARVMKKLG----HPNVVRLLGVCTE-EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred HHHHHHhhcC----CCChheeeeeecC-CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 5555555553 2222222222222 34567999999999999875432 24567777766666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.||++. .+++.|||....+
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEccccccccc
Confidence 89999999999999999965 4899999976543
No 262
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=98.75 E-value=5.5e-08 Score=112.78 Aligned_cols=150 Identities=16% Similarity=0.076 Sum_probs=94.1
Q ss_pred ccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 403 FRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 403 F~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
|.++..++||.|++|+||+|... +|+.||||..+.........+ ....+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~---------------------~~~~~~~~------ 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHD---------------------SRQKDMVK------ 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccc---------------------hHHHHHHH------
Confidence 45667789999999999999864 799999997753322110000 00000011
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+..|+..+.++. +...+.+.... +.....+|||||++|.+|.+...- ...++...+...+.+++ +..+|..
T Consensus 54 ~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~ 127 (272)
T cd06629 54 ALRSEIETLKDLD----HLNIVQYLGFE-TTEEYLSIFLEYVPGGSIGSCLRT-YGRFEEQLVRFFTEQVLEGLAYLHSK 127 (272)
T ss_pred HHHHHHHHHHhcC----CCCcceEEEEe-ccCCceEEEEecCCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 2345555555442 22222332222 223456899999999999876431 13355444444433333 6789999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .+++.|||...
T Consensus 128 ~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 128 GILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred CeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999965 58999999753
No 263
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=98.74 E-value=4.9e-08 Score=114.58 Aligned_cols=138 Identities=15% Similarity=0.069 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||||+........ -..+..+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~~~~~~~~E~ 51 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 51 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh----------------------------------hhhHHHHHHHH
Confidence 56899999999999964 79999999875422110 01123345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. .....+|||||++|..|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 52 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 126 (285)
T cd05605 52 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYR 126 (285)
T ss_pred HHHHhcC----CCCEeeeeeeec-CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEec
Confidence 6665553 222233333322 223468999999999998764322 23466666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 127 dlkp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05605 127 DLKPENILLDDYGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEeeCCCce
Confidence 9999999975 48999999764
No 264
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=98.74 E-value=4.9e-08 Score=116.65 Aligned_cols=137 Identities=16% Similarity=0.065 Sum_probs=87.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|.||+|+.. +|+.||||+.++..... ..+ . -.+..|.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~--------------------------~-------~~~~~e~~ 47 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-DDD--------------------------V-------ECTMVEKR 47 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-cch--------------------------H-------HHHHHHHH
Confidence 5899999999999975 68999999987653210 000 0 01122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.. .+.+...+.+-..+. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|+
T Consensus 48 ~l~~---~~~hp~iv~~~~~~~-~~~~~~lv~ey~~~g~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdi 122 (316)
T cd05619 48 VLSL---AWEHPFLTHLYCTFQ-TKENLFFVMEYLNGGDLMFHIQ-SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDL 122 (316)
T ss_pred HHHh---ccCCCcCcceEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCC
Confidence 2222 122222222222222 2234579999999999977632 223456655555544544 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 123 kp~Nil~~~~~~~kl~Dfg~~~ 144 (316)
T cd05619 123 KLDNILLDTDGHIKIADFGMCK 144 (316)
T ss_pred CHHHEEECCCCCEEEccCCcce
Confidence 99999975 48999999754
No 265
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=98.74 E-value=5.6e-08 Score=113.60 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=87.3
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|+||+|+.+ +|+.||+|+........ . ..+-.+..|...
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---~-------------------------------~~~~~~~~E~~i 46 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---K-------------------------------SGEKMALLEKEI 46 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---c-------------------------------hhhHHHHHHHHH
Confidence 689999999999965 79999999874321100 0 000111234444
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.++. +...+.+-..+ +.....+|||||++|.+|.+.... ...+++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~----hp~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~di 121 (277)
T cd05607 47 LEKVN----SPFIVNLAYAF-ESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDM 121 (277)
T ss_pred HHhcC----CCcEEEEEEEE-ecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccC
Confidence 44432 22222222222 223456899999999999765422 123466665555444444 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.||+++ .++++|||....
T Consensus 122 kp~Nili~~~~~~~l~Dfg~~~~ 144 (277)
T cd05607 122 KPENVLLDDQGNCRLSDLGLAVE 144 (277)
T ss_pred ChHhEEEcCCCCEEEeeceeeee
Confidence 99999975 489999997543
No 266
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.73 E-value=3.2e-08 Score=116.01 Aligned_cols=140 Identities=19% Similarity=0.198 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... . ....+.+|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~--------------------~---------------~~~~~~~e 51 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--------------------G---------------MPLSTIRE 51 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC--------------------C---------------chHHHHHH
Confidence 56999999999999863 57899999876432110 0 00112334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee----CCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW----DKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~----~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
...+.++.. +.+..-+.+-.++. +..+.-+|||||++| .+.+.... ...+++...+...+.+++ +..+|..
T Consensus 52 ~~~l~~l~~-~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 129 (290)
T cd07862 52 VAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 129 (290)
T ss_pred HHHHHhhcc-cCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 333333321 22322233333332 123446899999986 55554321 223466666666665555 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 130 ~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 130 RVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 999999999999965 58999999753
No 267
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.73 E-value=7.3e-08 Score=111.28 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...+|+.||||+.......... . . ...-.+.+|+.
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~------------------------~-~------~~~~~~~~e~~ 54 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA------------------------A-E------KEYEKLQEEVD 54 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhh------------------------H-H------HHHHHHHHHHH
Confidence 579999999999999889999999987543211000 0 0 00113455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.++++. +...+.+.....+ ....+++|||++|.+|.++.. ....++...+...+.++. +..+|..|++|+|+
T Consensus 55 ~l~~l~----~~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 128 (265)
T cd06631 55 LLKSLK----HVNIVQYLGTCLD-DNTISIFMEFVPGGSISSILN-RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDI 128 (265)
T ss_pred HHHhcC----CCCEeeEeeEeec-CCeEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence 555553 2222233332222 245689999999999988743 223345555544444444 67889999999999
Q ss_pred CCCCCCCC---eeEEecCCchhhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~l 587 (1578)
+|.||++. .++++|||....+
T Consensus 129 ~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 129 KGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CHHhEEECCCCeEEeccchhhHhh
Confidence 99999965 5899999976544
No 268
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.73 E-value=4.3e-08 Score=129.00 Aligned_cols=140 Identities=20% Similarity=0.171 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... ... .-.|.+|+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~----------------------------e~~------~~rflrEi 53 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN----------------------------PLL------KKRFLREA 53 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC----------------------------HHH------HHHHHHHH
Confidence 57999999999999965 79999999986543211 000 11245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh----------hcCCCHHHHHHHHHHHH--HHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL----------EKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~----------~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+.+.++. +..-+.+-.++. -....++||||++|.+|.++..-. ..+.+...+...+.++. +..
T Consensus 54 ~ILs~L~----HPNIVkl~~v~~-d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~y 128 (932)
T PRK13184 54 KIAADLI----HPGIVPVYSICS-DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEY 128 (932)
T ss_pred HHHHhCC----CcCcCeEEEEEe-eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHH
Confidence 6555543 322233333332 234568999999999998764311 11223333444444443 778
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|..|++|+|++|.|||++ .++++|||....+
T Consensus 129 LHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i 163 (932)
T PRK13184 129 VHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK 163 (932)
T ss_pred HHHCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence 9999999999999999965 5899999976543
No 269
>KOG1164|consensus
Probab=98.73 E-value=3e-08 Score=118.98 Aligned_cols=139 Identities=22% Similarity=0.237 Sum_probs=99.6
Q ss_pred CcccccccceEEEEEEecCC--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEG--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
...||.|++|+||.+...+. ..+|+|+........- + . +..
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~------------------~-------------~------l~~ 65 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP------------------S-------------V------LKI 65 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC------------------c-------------c------chh
Confidence 36899999999999996543 5899999865322110 0 0 122
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCC-CCc--eEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDK-SST--RVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~--~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
|...+..+.. ....-.+|.+++.. .+. +++||+.+ |.+|.|+..... ..++...+++..++++ ++.||..
T Consensus 66 E~~vl~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~ 141 (322)
T KOG1164|consen 66 EIQVLKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK 141 (322)
T ss_pred HHHHHHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence 2223333322 12335678888766 233 68999999 999999764333 5678888888888877 8999999
Q ss_pred CccccCCCCCCCCCC--------eeEEecCCchhhh
Q psy12972 560 GFVHADPHSGNDVNT--------WLYPVDLGDKFRL 587 (1578)
Q Consensus 560 G~vH~DpHPGNilv~--------~v~liDfG~~~~l 587 (1578)
||+|||+||+|++++ .++++|||.+.+.
T Consensus 142 G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 142 GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred CcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 999999999999964 3899999998743
No 270
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.73 E-value=1.3e-08 Score=109.69 Aligned_cols=67 Identities=28% Similarity=0.427 Sum_probs=58.9
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhcccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDLF 701 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~ 701 (1578)
...|||++||+++. .+..+|+++||++++++|||+.... .+.+.+..||+||++|+||.+|+.|+..
T Consensus 2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~ 76 (173)
T PRK00294 2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLA 76 (173)
T ss_pred CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 46799999999985 6789999999999999999997542 2556799999999999999999999953
No 271
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=98.73 E-value=4.2e-08 Score=118.51 Aligned_cols=138 Identities=17% Similarity=0.102 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... . .-+
T Consensus 13 ~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~ 56 (343)
T cd05103 13 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS---E---------------------------------HRA 56 (343)
T ss_pred ccccCCccceEEEEeeccCCccccceeEEEEEeccCCChH---H---------------------------------HHH
Confidence 6799999999999973 468999999986543210 0 012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------------------------- 536 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------------------------- 536 (1578)
+.+|...+.++. +++. +.+-..+......-+|+|||++|.+|.++.....
T Consensus 57 ~~~E~~~l~~l~----~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (343)
T cd05103 57 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISE 132 (343)
T ss_pred HHHHHHHHHhcc----CCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhh
Confidence 344555555542 2222 2222222222234579999999999987643110
Q ss_pred -----------------------------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCC
Q psy12972 537 -----------------------------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVN 573 (1578)
Q Consensus 537 -----------------------------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv 573 (1578)
..++...+...+.++. +..+|..|++|+|++|.|||+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~ 212 (343)
T cd05103 133 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL 212 (343)
T ss_pred hhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE
Confidence 1123333333444444 678899999999999999997
Q ss_pred C---eeEEecCCchhh
Q psy12972 574 T---WLYPVDLGDKFR 586 (1578)
Q Consensus 574 ~---~v~liDfG~~~~ 586 (1578)
. .++++|||....
T Consensus 213 ~~~~~~kl~dfg~~~~ 228 (343)
T cd05103 213 SENNVVKICDFGLARD 228 (343)
T ss_pred cCCCcEEEEecccccc
Confidence 5 589999997644
No 272
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.73 E-value=9e-08 Score=110.91 Aligned_cols=135 Identities=12% Similarity=0.106 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEecC-------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
+.||.|++|+||+|++.+ +.+||||+..+.....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~--------------------------------- 47 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDI--------------------------------- 47 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhH---------------------------------
Confidence 358999999999998642 2369999876532210
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
...|..|+..+..+ .+..-+.+..... -....+|+|||++|.++..........++...+...+.++. +
T Consensus 48 ----~~~~~~~~~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 48 ----SLAFFETASMMRQV----SHKHIVLLYGVCV-RDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred ----HHHHHHHHHHHHhC----CCCCEeeEEEEEe-cCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 01134444444433 2322233333322 23457899999999998766432223456666555555555 7
Q ss_pred HHHHHcCccccCCCCCCCCCC----------eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT----------WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~----------~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.|||+. .+++.|||...
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 788999999999999999974 17888999754
No 273
>KOG0600|consensus
Probab=98.72 E-value=4e-08 Score=117.36 Aligned_cols=146 Identities=22% Similarity=0.288 Sum_probs=94.1
Q ss_pred HhCCChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 394 DFGCTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 394 ~lG~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
.++..-.+.|+.+ +-||.|.+||||+|+ +.+|+.||+|=.+=+..+. .
T Consensus 110 ~w~~r~~~~feki--~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~--------------------~--------- 158 (560)
T KOG0600|consen 110 GWGPRRADSFEKI--EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE--------------------G--------- 158 (560)
T ss_pred cccccchHHHHHH--HHhcCcchhheeEeeecccCcEEEEEEeecccCCC--------------------c---------
Confidence 4555566778877 459999999999999 5689999999665332110 0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhhc---CCCHHHHHHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLEK---GFSLADVDRKL 548 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~~---~~~~~~v~~~l 548 (1578)
+-..+ .+|..-++++. |...|..-.++.+ +++.-+||.||++- |+..+... .++..+|--.+
T Consensus 159 ~~~t~------~REI~ILr~l~----HpNIikL~eivt~~~~~siYlVFeYMdh----DL~GLl~~p~vkft~~qIKc~m 224 (560)
T KOG0600|consen 159 FPITA------IREIKILRRLD----HPNIIKLEEIVTSKLSGSIYLVFEYMDH----DLSGLLSSPGVKFTEPQIKCYM 224 (560)
T ss_pred chHHH------HHHHHHHHhcC----CCcccceeeEEEecCCceEEEEEecccc----hhhhhhcCCCcccChHHHHHHH
Confidence 00111 23333444432 2223333343332 35667899999963 33333322 45667777666
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
.+++ ++.+|..|++|||+|..|||+. .+++-|||++
T Consensus 225 kQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLA 265 (560)
T KOG0600|consen 225 KQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLA 265 (560)
T ss_pred HHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccce
Confidence 6666 8899999999999999999954 4666677754
No 274
>PRK10345 hypothetical protein; Provisional
Probab=98.72 E-value=2.6e-08 Score=111.70 Aligned_cols=135 Identities=11% Similarity=0.162 Sum_probs=86.5
Q ss_pred CCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 407 DENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.++||+||++.||. ...++.. +|||.+++-.. .+-++++|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~-------------------------------------~~~~~~rE 46 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDG-------------------------------------GDKEIRRE 46 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccc-------------------------------------hHHHHHHH
Confidence 347999999999995 3346666 69998764210 00124566
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCce---E---EEEec--cCCCcCCchhhHhhcCCCHH-HHHHHHHHHHHHHHH
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTR---V---LTTEF--IDGVKISDKEGLLEKGFSLA-DVDRKLFTAFAEQIF 557 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~---V---LVME~--i~G~~l~d~~~l~~~~~~~~-~v~~~l~~~~l~~i~ 557 (1578)
.+-+.++.+.-.. .-.||++|..+.|.. . +|||| ..|.+|.++. .+..++.. .....++..+.+.+|
T Consensus 47 i~~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l--~~~~~~e~~~~~~~~L~~l~~yLh 122 (210)
T PRK10345 47 LKYYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFA--EQCRYEEDVAQLRQLLKKLKRYLL 122 (210)
T ss_pred HHHHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHH--HcccccHhHHHHHHHHHHHHHHHH
Confidence 6666666432112 234677765554442 2 78999 4467888764 33333332 234455556678999
Q ss_pred HcCccccCCCCCCCCCC-------eeEEecCCch
Q psy12972 558 QTGFVHADPHSGNDVNT-------WLYPVDLGDK 584 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~-------~v~liDfG~~ 584 (1578)
.+|++|+|++|.|||++ .++++|+++.
T Consensus 123 ~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 123 DNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999974 4888885544
No 275
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.72 E-value=5e-08 Score=111.85 Aligned_cols=136 Identities=20% Similarity=0.239 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||+|+....-...-. . .....|+
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-----------------------------~------~~~~~e~ 49 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-----------------------------R------EENIREI 49 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-----------------------------H------HHHHHHH
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-----------------------------c------chhhhhh
Confidence 57999999999999976 6789999998764322100 0 0012266
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+++++ +..-+.+-.++.. ...-+++|||++|.++.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 50 ~~~~~l~----~~~i~~~~~~~~~-~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d 123 (260)
T PF00069_consen 50 KILRRLR----HPNIVQILDVFQD-DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRD 123 (260)
T ss_dssp HHHHHHT----BTTBCHEEEEEEE-SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred hcccccc----ccccccccccccc-ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence 6666663 2222333333322 455679999999998887644 356677777777666666 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 124 ikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 124 IKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp BSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccccccc
Confidence 999999965 58999999764
No 276
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=98.72 E-value=6.3e-08 Score=112.02 Aligned_cols=138 Identities=20% Similarity=0.237 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.+ +...||||+.+++..... .-+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~------------------------------------~~~~~ 53 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQ------------------------------------RLDFL 53 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHH------------------------------------HHHHH
Confidence 67999999999999975 246899998875432110 11344
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++. +...+.+...+. .....+++|||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 54 ~e~~~l~~l~----h~~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 128 (266)
T cd05033 54 TEASIMGQFD----HPNIIRLEGVVT-KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV 128 (266)
T ss_pred HHHHHHHhCC----CCCcceEeEEEe-cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5555555442 222233333332 23456899999999999887543333466666666665555 6889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|+|++|.||+++ .++++|||....+
T Consensus 129 H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 129 HRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred cCCCCcceEEEcCCCCEEECccchhhcc
Confidence 999999999975 4899999976544
No 277
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=98.72 E-value=5.5e-08 Score=112.53 Aligned_cols=138 Identities=20% Similarity=0.206 Sum_probs=92.4
Q ss_pred CcccccccceEEEEEEec-CCC---EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGV---EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~---~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
.+.||.|++|+||+|+++ +|+ .||||+.+++..... .-+|
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~~~~ 53 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQ------------------------------------RQDF 53 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHH------------------------------------HHHH
Confidence 367999999999999975 443 799998765432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++ .+...+.+...+.. ....+|||||++|.+|.+........++...+...+.+++ +..+|..|+
T Consensus 54 ~~e~~~l~~l----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 128 (268)
T cd05063 54 LSEASIMGQF----SHHNIIRLEGVVTK-FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY 128 (268)
T ss_pred HHHHHHHhcC----CCCCeeEEEEEEcc-CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4555544443 23333333333332 2456899999999999877432223456666665555544 688999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.||+++ .+++.|||....
T Consensus 129 ~H~dlkp~Nili~~~~~~kl~dfg~~~~ 156 (268)
T cd05063 129 VHRDLAARNILVNSNLECKVSDFGLSRV 156 (268)
T ss_pred eccccchhhEEEcCCCcEEECCCcccee
Confidence 9999999999975 488999997643
No 278
>KOG0198|consensus
Probab=98.72 E-value=4.4e-08 Score=115.22 Aligned_cols=136 Identities=22% Similarity=0.164 Sum_probs=85.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.||+|.||.|..+ +|+..|||...-. + .. . .+.+ .+|.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~-------~------------------~~-~-----~~~l------~~Ei 65 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELE-------D------------------SP-T-----SESL------EREI 65 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecc-------c------------------ch-h-----HHHH------HHHH
Confidence 56899999999999976 5999999964211 0 00 0 1112 3334
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+-+.++. ++.| -+.+....+ .--|.|||+.|.+|.+...-...+++...+.....++. +..||.+||
T Consensus 66 ~iL~~l~-----~p~I--V~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 66 RILSRLN-----HPNI--VQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHhCC-----CCCE--EeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4444433 1211 111211111 23589999999999998432211355444444333433 888999999
Q ss_pred cccCCCCCCCCC----CeeEEecCCchhhhh
Q psy12972 562 VHADPHSGNDVN----TWLYPVDLGDKFRLV 588 (1578)
Q Consensus 562 vH~DpHPGNilv----~~v~liDfG~~~~l~ 588 (1578)
+|||+||.|||+ +.+++.|||...+..
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999996 358999999766554
No 279
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.72 E-value=5.3e-08 Score=113.69 Aligned_cols=71 Identities=13% Similarity=0.037 Sum_probs=54.2
Q ss_pred CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----------eeEEecC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----------WLYPVDL 581 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----------~v~liDf 581 (1578)
...+|||||++|.++.++.......++...+...+.++. ++.+|..|++|+|++|.|||+. .+++.||
T Consensus 89 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~ 168 (274)
T cd05076 89 SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDP 168 (274)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCC
Confidence 467899999999999776433334466666665555555 7889999999999999999964 2678888
Q ss_pred Cch
Q psy12972 582 GDK 584 (1578)
Q Consensus 582 G~~ 584 (1578)
|..
T Consensus 169 g~~ 171 (274)
T cd05076 169 GVS 171 (274)
T ss_pred ccc
Confidence 865
No 280
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=98.72 E-value=4e-08 Score=128.96 Aligned_cols=137 Identities=15% Similarity=0.119 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. + ..... .+..|.
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~----~------------------------~~~~~------~~~~E~ 55 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI----N------------------------KNMVH------QVQAER 55 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc----C------------------------HHHHH------HHHHHH
Confidence 67999999999999976 7999999998632100 0 00001 123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+ ......+|||||++|..|.++... ...++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l----~hp~Iv~~~~~~-~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrD 129 (669)
T cd05610 56 DALALS----KSPFIVHLYYSL-QSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRD 129 (669)
T ss_pred HHHHhc----CCCCcCeEEEEE-EECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCC
Confidence 333332 222222222222 223456899999999999887432 22345554544444444 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 130 LKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 130 LKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred ccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999974 58999999763
No 281
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.71 E-value=6.2e-08 Score=112.02 Aligned_cols=136 Identities=16% Similarity=0.166 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+....... ..+.+|+
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~-------------------------------------~~~~~e~ 57 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDF-------------------------------------SLIQQEI 57 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccchH-------------------------------------HHHHHHH
Confidence 6789999999999996 5899999999864321110 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. .....++||||++|.+|.++.. ....++...+...+.++. +..+|..|++|+|
T Consensus 58 ~~l~~~~----h~~ii~~~~~~~-~~~~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (267)
T cd06646 58 FMVKECK----HCNIVAYFGSYL-SREKLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRD 131 (267)
T ss_pred HHHHhcC----CCCeeeeeEEEE-eCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 5554432 222222222221 2245679999999999987642 233456555555544444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||...++
T Consensus 132 l~p~nill~~~~~~~l~dfg~~~~~ 156 (267)
T cd06646 132 IKGANILLTDNGDVKLADFGVAAKI 156 (267)
T ss_pred CCHHHEEECCCCCEEECcCccceee
Confidence 999999975 4899999987544
No 282
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.71 E-value=6.2e-08 Score=111.53 Aligned_cols=132 Identities=15% Similarity=0.102 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+..++... .-++..|..
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccC--------------------------------------HHHHHHHHH
Confidence 679999999999999888899999987653210 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
.++++. + + .+++++.. .....+++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|
T Consensus 54 ~l~~l~----h-~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h 126 (261)
T cd05034 54 IMKKLR----H-D--KLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIH 126 (261)
T ss_pred HHhhCC----C-C--CEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 555543 2 2 23333322 224578999999999998764321 12355665555554444 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||+++ .++++|||...
T Consensus 127 ~di~p~nili~~~~~~~l~d~g~~~ 151 (261)
T cd05034 127 RDLAARNILVGENLVCKIADFGLAR 151 (261)
T ss_pred CCcchheEEEcCCCCEEECccccce
Confidence 99999999975 58899999754
No 283
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=98.71 E-value=7.5e-08 Score=110.86 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|++||||+.+...... + . ..+-.++.+|+
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~---~----------------------~-------~~~~~~~~~e~ 55 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSP---E----------------------T-------KKEVNALECEI 55 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccch---h----------------------h-------HHHHHHHHHHH
Confidence 68999999999999864 79999999876432110 0 0 00002346666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+...+ .......+||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~d 129 (263)
T cd06625 56 QLLKNLQ----HERIVQYYGCL-RDDETLSIFMEYMPGGSVKDQLK-AYGALTETVTRKYTRQILEGVEYLHSNMIVHRD 129 (263)
T ss_pred HHHHhCC----CCCeeeeEEEE-ccCCeEEEEEEECCCCcHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 6665543 22223332332 23345679999999999987643 122344444443333333 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||...++
T Consensus 130 l~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 130 IKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred CCHHHEEEcCCCCEEEeecccceec
Confidence 999999965 5899999976543
No 284
>KOG0578|consensus
Probab=98.71 E-value=2.5e-08 Score=121.05 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=91.0
Q ss_pred CChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++...|..| +-||.|+-|-||.|+ ..+++.||||... ++.+-+.++ +++
T Consensus 269 ~dP~~~y~~~--~kigqgaSG~vy~A~~~~~~~~VaiK~m~--l~~Q~~keL---------------------iln---- 319 (550)
T KOG0578|consen 269 GDPRSKYTDF--KKIGQGATGGVYVARKISTKQEVAIKRMD--LRKQPKKEL---------------------LLN---- 319 (550)
T ss_pred CChhhhhcch--hhhccccccceeeeeeccCCceEEEEEEE--eccCCchhh---------------------hHH----
Confidence 3456666766 559999999999998 4589999999752 222212221 111
Q ss_pred HHHHHHhHHH--HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 476 PLEQELDFLN--EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 476 ~l~~ElDf~~--Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
|+.-.+ .-.|+.+|-+.+- ...+-+.||||++|..|+|+. ....++...++..+-+++
T Consensus 320 ----Ei~Vm~~~~H~NiVnfl~Syl-------------v~deLWVVMEym~ggsLTDvV--t~~~~~E~qIA~Icre~l~ 380 (550)
T KOG0578|consen 320 ----EILVMRDLHHPNIVNFLDSYL-------------VGDELWVVMEYMEGGSLTDVV--TKTRMTEGQIAAICREILQ 380 (550)
T ss_pred ----HHHHHHhccchHHHHHHHHhc-------------ccceeEEEEeecCCCchhhhh--hcccccHHHHHHHHHHHHH
Confidence 111111 1234444433321 114456899999999999984 345567777777766666
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCc
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~ 583 (1578)
++.+|..|++|+|++..|||.+ .+++.|||-
T Consensus 381 aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGF 415 (550)
T KOG0578|consen 381 GLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGF 415 (550)
T ss_pred HHHHHHhcceeeeccccceeEeccCCcEEEeeeee
Confidence 8899999999999999999944 355555553
No 285
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=98.70 E-value=9e-08 Score=115.22 Aligned_cols=136 Identities=13% Similarity=0.153 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+.+....... .-++.+|+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------------~~~~~~E~ 54 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAI------------------------------------RNQIIREL 54 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHH------------------------------------HHHHHHHH
Confidence 56899999999999976 789999998765432110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++. +..-+.+...+.+ ....+|||||++|.+|.++... ...++...+...+.++. +..+|. .|++|+
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~ 128 (333)
T cd06650 55 QVLHECN----SPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 128 (333)
T ss_pred HHHHHCC----CCcccceeEEEEE-CCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 6666553 2223333344433 3457899999999999887431 22344444444444443 566775 589999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 129 dlkp~Nili~~~~~~kL~Dfg~~~~ 153 (333)
T cd06650 129 DVKPSNILVNSRGEIKLCDFGVSGQ 153 (333)
T ss_pred CCChhhEEEcCCCCEEEeeCCcchh
Confidence 9999999975 489999997644
No 286
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.70 E-value=7.2e-08 Score=110.84 Aligned_cols=134 Identities=18% Similarity=0.139 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|.. .|+.||+|+.+.+.. .-+|.+|+.
T Consensus 12 ~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~~---------------------------------------~~~~~~e~~ 51 (256)
T cd05082 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT---------------------------------------AQAFLAEAS 51 (256)
T ss_pred eeecccCCCeEEEEEE-cCCcEEEEEeCCCch---------------------------------------HHHHHHHHH
Confidence 5699999999999976 488999998642210 012456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+.+..+..+++|||++|.+|.+....... .++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 127 (256)
T cd05082 52 VMTQLR----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRD 127 (256)
T ss_pred HHHhCC----CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence 666543 333333333333333456899999999999886432111 245555555555544 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||+++ .++++|||....
T Consensus 128 lkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 128 LAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred cchheEEEcCCCcEEecCCcccee
Confidence 999999964 589999997643
No 287
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.70 E-value=1.7e-08 Score=109.42 Aligned_cols=66 Identities=24% Similarity=0.402 Sum_probs=56.9
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCC-hhH-----HHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNND-PTA-----QEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~-~~a-----~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
...|||++|||++. ++..+|+++||++++++|||+.+. +.+ .+.+..||+||++|+||.+|..|+.
T Consensus 4 ~~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 4 LKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 45799999999984 689999999999999999999863 332 3346899999999999999999995
No 288
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.70 E-value=9.2e-08 Score=110.33 Aligned_cols=133 Identities=16% Similarity=0.096 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
..||.|++|+||+|+..++..||+|+.+++-.. +-+|.+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM--------------------------------------PEAFLQEAQ 53 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc--------------------------------------HHHHHHHHH
Confidence 469999999999999888888999987653210 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+...+. ....+++|||++|.+|.+...-.. ..++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l----~h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d 127 (260)
T cd05069 54 IMKKL----RHDKLVPLYAVVS--EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD 127 (260)
T ss_pred HHHhC----CCCCeeeEEEEEc--CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecc
Confidence 55554 3333344444442 245689999999999987643211 2245554444444443 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .++++|||...
T Consensus 128 l~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 128 LRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred cCcceEEEcCCCeEEECCCccce
Confidence 999999975 48899999764
No 289
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.70 E-value=9.8e-08 Score=111.76 Aligned_cols=138 Identities=15% Similarity=0.104 Sum_probs=87.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||+|++|.||+|+.. +|+.||||+.++.....-..+ ..+..|..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~----------------------------------~~~~~~~~ 46 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE----------------------------------TLALNERI 46 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHH----------------------------------HHHHHHHH
Confidence 4799999999999965 799999999875422110000 00111211
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
-+ ++... .+++. ++..+.. .....++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~-~~~~~-~~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~-~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~ 121 (279)
T cd05633 47 ML-SLVST-GDCPF--IVCMTYAFHTPDKLCFILDLMNGGDLHYHLS-QHGVFSEKEMRFYATEIILGLEHMHNRFVVYR 121 (279)
T ss_pred HH-HHHhh-CCCCc--EeEEEEEEecCCeEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCC
Confidence 11 11111 12232 2333322 2345679999999999976532 223456666655555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+|||+. .++++|||....
T Consensus 122 dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 122 DLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred CCCHHHEEECCCCCEEEccCCccee
Confidence 9999999974 589999997643
No 290
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=98.69 E-value=8.2e-08 Score=114.72 Aligned_cols=135 Identities=16% Similarity=0.105 Sum_probs=88.2
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-||.|++|.||+|+.+ +|+.||||+.+...... ..+ .-.+..|.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~---------------------------------~~~~~~e~~ 47 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-DDD---------------------------------VECTMTEKR 47 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhH---------------------------------HHHHHHHHH
Confidence 4899999999999976 68999999987542110 000 001233444
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+..+. +++. +.+-.++. ....-++||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 il~~~~----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~d 121 (318)
T cd05570 48 VLALAG----KHPFLTQLHSCFQ-TKDRLFFVMEYVNGGDLMFHIQ-RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRD 121 (318)
T ss_pred HHHhcc----CCCCccceeeEEE-cCCEEEEEEcCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccC
Confidence 333332 2332 22223322 2344689999999998876532 223566666666555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
++|.||+++ .++++|||..
T Consensus 122 lkp~Nill~~~~~~kl~Dfg~~ 143 (318)
T cd05570 122 LKLDNVLLDSEGHIKIADFGMC 143 (318)
T ss_pred CCHHHeEECCCCcEEecccCCC
Confidence 999999975 5899999965
No 291
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=98.69 E-value=4.1e-08 Score=114.93 Aligned_cols=137 Identities=16% Similarity=0.134 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ +... .+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------~~~~------~~~~E~ 51 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----------------------------EVKE------TTLREL 51 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----------------------------cchh------hHHHHH
Confidence 57899999999999976 78999999876431100 0000 112344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+..++. .....+|||||++|..+..+.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 125 (287)
T cd07848 52 KMLRTLK----QENIVELKEAFR-RRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRD 125 (287)
T ss_pred HHHHhCC----CccccchhhhEe-cCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 4444332 222222222221 2245679999999976654422 224566666666666555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||+++ .+++.|||....
T Consensus 126 lkp~Nill~~~~~~kl~Dfg~~~~ 149 (287)
T cd07848 126 IKPENLLISHNDVLKLCDFGFARN 149 (287)
T ss_pred CCHHHEEEcCCCcEEEeeccCccc
Confidence 999999965 489999997644
No 292
>cd02993 PDI_a_APS_reductase PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS reductase catalyzes the reduction of activated sulfate to sulfite, a key step in the biosynthesis of sulfur-containing metabolites. Sulfate is first activated by ATP sulfurylase, forming APS, which can be phosphorylated to 3'-phosphoadenosine-5'-phosphosulfate (PAPS). Depending on the organism, either APS or PAPS can be used for sulfate reduction. Prokaryotes and fungi use PAPS, whereas plants use both APS and PAPS. Since plant-type APS reductase uses glutathione (GSH) as its electron donor, the C-terminal domain may function like glutaredoxin, a GSH-dependent member of the TRX superfamily. The flow of reducing equivalents goes from GSH - C-terminal TRX domain - N-terminal reductase domain - APS. Plant-type APS red
Probab=98.69 E-value=6.4e-09 Score=104.48 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=56.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCcccccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNH 828 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i 828 (1578)
.++..+|+..+...+++++|||.||||||+||++++|.|+++|+.+++.++.+..++++.- ..+.+. ....+
T Consensus 5 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~la~~~~~~~~~~~~vd~d~~-------~~~~~~-~~~~v 76 (109)
T cd02993 5 TLSRAEIEALAKGERRNQSTLVVLYAPWCPFCQAMEASYEELAEKLAGSNVKVAKFNADGE-------QREFAK-EELQL 76 (109)
T ss_pred eccHHHHHHHHhhhhcCCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECCcc-------chhhHH-hhcCC
Confidence 3455678877766667899999999999999999999999999999865443333322220 001111 11234
Q ss_pred ccCccccccccc
Q psy12972 829 MYNPFDDVFSEG 840 (1578)
Q Consensus 829 ~~~Ptiklf~~~ 840 (1578)
..+||+.+|+.+
T Consensus 77 ~~~Pti~~f~~~ 88 (109)
T cd02993 77 KSFPTILFFPKN 88 (109)
T ss_pred CcCCEEEEEcCC
Confidence 455999888764
No 293
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.69 E-value=8.5e-08 Score=110.57 Aligned_cols=134 Identities=16% Similarity=0.110 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||.|...++..||||..+++-.. +-+|.+|.+
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 51 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc--------------------------------------HHHHHHHHH
Confidence 468999999999998887788999976532110 112455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+...+. .....+|+|||+.|..+.+........++...+...+.++. +..+|..|++|+|+
T Consensus 52 ~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 126 (256)
T cd05113 52 VMMKLS----HEKLVQLYGVCT-KQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDL 126 (256)
T ss_pred HHhcCC----CCCeeeEEEEEc-cCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccc
Confidence 555542 222233333221 22345899999999998876432223466666666655555 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|+||++. .++++|||...
T Consensus 127 ~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 127 AARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred CcceEEEcCCCCEEECCCccce
Confidence 99999965 48999999754
No 294
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.69 E-value=7.2e-08 Score=111.14 Aligned_cols=134 Identities=14% Similarity=0.113 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|..++|+.||||+.+..... .-+|.+|..
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS--------------------------------------PEAFLAEAN 53 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCc--------------------------------------HHHHHHHHH
Confidence 569999999999999999999999987543210 013455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+. ....+++|||++|.+|.+..... ...++...+...+.+++ ++.+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~d 127 (260)
T cd05067 54 LMKQLQ----HPRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRD 127 (260)
T ss_pred HHHhcC----CcCeeeEEEEEc--cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccc
Confidence 555543 222233333331 23468999999999998764321 22456566655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 128 l~p~ni~i~~~~~~~l~dfg~~~~ 151 (260)
T cd05067 128 LRAANILVSETLCCKIADFGLARL 151 (260)
T ss_pred ccHHhEEEcCCCCEEEccCcceee
Confidence 999999975 489999997643
No 295
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.69 E-value=9.8e-08 Score=115.98 Aligned_cols=134 Identities=17% Similarity=0.184 Sum_probs=86.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... ....+.+|.
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~ 71 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT-----------------------------------HAKRAYREL 71 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchh-----------------------------------HHHHHHHHH
Confidence 68999999999999864 799999998753321100 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+..+ .+...+.+..++..-. ...++||||++|..... ....++...+...+.+++ +..+|..|
T Consensus 72 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~~ 143 (359)
T cd07876 72 VLLKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQV----IHMELDHERMSYLLYQMLCGIKHLHSAG 143 (359)
T ss_pred HHHHhC----CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHH----HhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 444333 2333334444332111 23579999998743222 123466666665555555 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 144 ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 144 IIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred cccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 99999999999965 59999999764
No 296
>KOG0660|consensus
Probab=98.69 E-value=1.7e-08 Score=116.71 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=85.0
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-+|||.|+.|.|..|+.+ +|+.||||=..--.. ...+.+ +. .+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~---------------------~~~~ak--------Rt------lRE 71 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE---------------------NQIDAK--------RT------LRE 71 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhh---------------------chHHHH--------HH------HHH
Confidence 489999999999999965 899999983321011 001111 11 123
Q ss_pred HHHHHHHHH-hhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSK-DLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~-~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.+-++++++ |.-....|..|....++ ..-++|+|++ +..|..+. .... ++.+-+-..+.+++ ++.||..|++
T Consensus 72 lklLr~~~HeNIi~l~di~~p~~~~~f-~DvYiV~elM-etDL~~ii--k~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 72 LKLLRHLRHENIIGLLDIFRPPSRDKF-NDVYLVFELM-ETDLHQII--KSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred HHHHHHhcCCCcceEEeeccccccccc-ceeEEehhHH-hhHHHHHH--HcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 334444431 11112234444222211 3346999999 55565552 2222 55444444555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|||+||+|+++. .+++.|||.+.
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred ccccchhheeeccCCCEEecccccee
Confidence 999999999976 59999999874
No 297
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=98.69 E-value=6.3e-08 Score=116.15 Aligned_cols=136 Identities=18% Similarity=0.143 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+........ .....+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~E~ 50 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV-----------------------------------SDATRILREI 50 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc-----------------------------------hhHHHHHHHH
Confidence 56899999999999964 79999999875321100 0011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+..++.... ..-+|||||++| .+.+... ....++...+...+.++. +..+|..|+
T Consensus 51 ~~l~~l~----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 124 (338)
T cd07859 51 KLLRLLR----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIK-ANDDLTPEHHQFFLYQLLRALKYIHTANV 124 (338)
T ss_pred HHHHhCC----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 322233333332111 235899999965 5555422 223466666655555554 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 125 vH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 125 FHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred ecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999999999965 58999999764
No 298
>KOG0587|consensus
Probab=98.69 E-value=3.6e-08 Score=124.04 Aligned_cols=148 Identities=18% Similarity=0.144 Sum_probs=101.8
Q ss_pred CChhhhccccCCcccccccceEEEEEE-ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAV-TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~-l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++++.|.-+ +-||-|-.|+||+++ .++|+.+||||+.|+....-+..
T Consensus 15 pdp~d~~ei~--evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE----------------------------- 63 (953)
T KOG0587|consen 15 PDPADIFEII--EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIE----------------------------- 63 (953)
T ss_pred CCCCCccEEE--EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHH-----------------------------
Confidence 3455666555 568999999999998 56899999999999865431111
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeec-EEee----CCCCceEEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHH
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIP-RILW----DKSSTRVLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLF 549 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP-~v~~----~~~t~~VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~ 549 (1578)
.|. |+-++ +.+++.+..= .++- .-...-+||||||.|++++|+.. +....++.+.++.++.
T Consensus 64 ---------~ey-nil~~---~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~r 130 (953)
T KOG0587|consen 64 ---------LEY-NMLKK---YSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILR 130 (953)
T ss_pred ---------HHH-HHHHh---ccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHH
Confidence 011 22222 2344432111 1110 11234579999999999999854 3344566677888888
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
+++ +..+|..-++|+|++--|||.+ .|+++|||...++.
T Consensus 131 e~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 131 EILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred HHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 887 7778899999999999999965 69999999887764
No 299
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.69 E-value=1.1e-07 Score=111.12 Aligned_cols=137 Identities=16% Similarity=0.043 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|.||+|..+ +|+.||||+........ .-+|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~ 52 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH-------------------------------------LRDF 52 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 57999999999999743 68999999875432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++ .+..-+.+........ ...+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 53 ~~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~ 128 (284)
T cd05081 53 EREIEILKSL----QHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128 (284)
T ss_pred HHHHHHHHhC----CCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4555555444 2222233222221122 235799999999999887432223356665555555544 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 129 i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 129 YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 99999999999975 588899997643
No 300
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=98.69 E-value=8.2e-08 Score=109.83 Aligned_cols=138 Identities=22% Similarity=0.250 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEecC-----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+..+ ++.||+|+.+++.... ..-++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 48 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ------------------------------------QIEEF 48 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH------------------------------------HHHHH
Confidence 679999999999999753 4899999987653211 11123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..|.+.+.++. +...+.+-..+. .....+++|||++|.+|.+........ ++...+...+.+++ +..+|..|
T Consensus 49 ~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~ 123 (258)
T smart00219 49 LREARIMRKLD----HPNIVKLLGVCT-EEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN 123 (258)
T ss_pred HHHHHHHHhcC----CCchheEEEEEc-CCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 44555554441 222122222221 224578999999999998874422222 67666666555554 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+|++|+||++. .++++|||.....
T Consensus 124 ~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 124 FIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred eeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999999965 5899999976443
No 301
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.68 E-value=1e-07 Score=109.85 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+++.||||...+.-.. .-++..|+.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS--------------------------------------VQAFLEEAN 53 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh--------------------------------------HHHHHHHHH
Confidence 579999999999999888999999987643110 002345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +..-+.+-..+ .-....+|+|||++|.+|.+..... ....+...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~d 128 (261)
T cd05072 54 LMKTLQ----HDKLVRLYAVV-TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRD 128 (261)
T ss_pred HHHhCC----CCCeeeEEEEE-cCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 555542 22222222222 2234568999999999998864322 23355555555554544 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .+++.|||....
T Consensus 129 l~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 129 LRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred cchhhEEecCCCcEEECCCcccee
Confidence 999999965 478899997643
No 302
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.68 E-value=9.1e-08 Score=109.86 Aligned_cols=137 Identities=18% Similarity=0.122 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEecC--C--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE--G--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~--G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||+|+.|.||+|...+ | ..||||+.+++... ...-+|.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~~~~~ 44 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------------------------------------DIMDDFL 44 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------------------------------------HHHHHHH
Confidence 368999999999998653 3 36999988764331 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+|.+.+.+++ +...+.+...+.+ ....+||||++|.+|.+...-.. ..++...+...+.++. +..+|..|+
T Consensus 45 ~e~~~l~~l~----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 45 KEAAIMHSLD----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred HHHHHHhhcC----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5555555543 3333444444433 56689999999999987643211 2355555555555544 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred cccccCcccEEEecCCEEEeccccccccc
Confidence 9999999999975 5899999976443
No 303
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=98.68 E-value=1e-07 Score=112.07 Aligned_cols=144 Identities=17% Similarity=0.214 Sum_probs=96.1
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|+-. +.||.|++|.||+|+.. +|+.||+|+........
T Consensus 10 ~~~~y~i~--~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~----------------------------------- 52 (292)
T cd06644 10 PNEVWEII--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE----------------------------------- 52 (292)
T ss_pred cchhhhhh--heecCCCCeEEEEEEECCCCceEEEEEeccCCHHH-----------------------------------
Confidence 34555544 45999999999999975 68999999975432110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-++..|.+.+.++. +..-+.+-..+ ...+.-+|||||++|..+.....-...+++...+...+.+++ +..
T Consensus 53 --~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~ 125 (292)
T cd06644 53 --LEDYMVEIEILATCN----HPYIVKLLGAF-YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQY 125 (292)
T ss_pred --HHHHHHHHHHHHhCC----CCcEeeeEEEE-EeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 012345555555442 22222222222 234567899999999998765332234567666666655555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.||++. .++++|||....
T Consensus 126 lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 126 LHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred HhcCCeeecCCCcceEEEcCCCCEEEccCcccee
Confidence 8999999999999999975 599999997543
No 304
>cd03004 PDI_a_ERdj5_C PDIa family, C-terminal ERdj5 subfamily; ERdj5, also known as JPDI and macrothioredoxin, is a protein containing an N-terminal DnaJ domain and four redox active TRX domains. This subfamily is composed of the three TRX domains located at the C-terminal half of the protein. ERdj5 is a ubiquitous protein localized in the endoplasmic reticulum (ER) and is abundant in secretory cells. It's transcription is induced during ER stress. It interacts with BiP through its DnaJ domain in an ATP-dependent manner. BiP, an ER-resident member of the Hsp70 chaperone family, functions in ER-associated degradation and protein translocation. Also included in the alignment is the single complete TRX domain of an uncharacterized protein from Tetraodon nigroviridis, which also contains a DnaJ domain at its N-terminus.
Probab=98.68 E-value=4.3e-09 Score=104.50 Aligned_cols=77 Identities=19% Similarity=0.322 Sum_probs=55.8
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~ 826 (1578)
.++..||++.+.. ++++++|.||||||++|+++.|.|+++++.+++. .++.++|.... +|+..++.
T Consensus 5 ~l~~~~f~~~i~~--~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~i~---------- 72 (104)
T cd03004 5 TLTPEDFPELVLN--RKEPWLVDFYAPWCGPCQALLPELRKAARALKGKVKVGSVDCQKYESLCQQANIR---------- 72 (104)
T ss_pred EcCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECCchHHHHHHcCCC----------
Confidence 4556688887753 4569999999999999999999999999998654 34444443221 44444443
Q ss_pred ccccCccccccccc
Q psy12972 827 NHMYNPFDDVFSEG 840 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~ 840 (1578)
.+||+.+|..+
T Consensus 73 ---~~Pt~~~~~~g 83 (104)
T cd03004 73 ---AYPTIRLYPGN 83 (104)
T ss_pred ---cccEEEEEcCC
Confidence 44998888875
No 305
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.68 E-value=1e-07 Score=109.81 Aligned_cols=133 Identities=16% Similarity=0.122 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|...++..||+|..+++... +-+|.+|+.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~E~~ 53 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS--------------------------------------PESFLEEAQ 53 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 469999999999999888999999998764211 012455555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+.++ .+...+.+..... ....+++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l----~~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~d 127 (260)
T cd05070 54 IMKKL----RHDKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 127 (260)
T ss_pred HHHhc----CCCceEEEEeEEC--CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 55444 2333344444442 34578999999999998764311 12356555555555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||+++ .++++|||...
T Consensus 128 i~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 128 LRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CccceEEEeCCceEEeCCceeee
Confidence 999999965 47889999764
No 306
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=98.68 E-value=1e-07 Score=111.14 Aligned_cols=136 Identities=21% Similarity=0.252 Sum_probs=93.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........ .-+|..|+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------------~~~~~~e~ 53 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE-------------------------------------LEDFMVEI 53 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH-------------------------------------HHHHHHHH
Confidence 45899999999999975 79999999986432111 01345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. ......|||||++|..+.++..-....++...+...+.++. +..+|..|++|+|
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d 128 (280)
T cd06611 54 DILSECK----HPNIVGLYEAYF-YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRD 128 (280)
T ss_pred HHHHhCC----CCceeEEEEEEe-cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 5555543 222233333332 23446799999999999887443334566666666666555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 129 l~p~nili~~~~~~~l~d~g~~~~ 152 (280)
T cd06611 129 LKAGNILLTLDGDVKLADFGVSAK 152 (280)
T ss_pred CChhhEEECCCCCEEEccCccchh
Confidence 999999965 589999997543
No 307
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=98.68 E-value=5.1e-08 Score=112.93 Aligned_cols=144 Identities=17% Similarity=0.120 Sum_probs=93.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
++++|... +.||.|++|+||+|... +|+.||||+....-.
T Consensus 4 ~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------------------------------------- 44 (272)
T cd06637 4 PAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------------------------------------- 44 (272)
T ss_pred hhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-------------------------------------
Confidence 45556554 56999999999999965 689999998742110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTA 551 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~ 551 (1578)
.+.++.+|...+.++. .+..-+.+...+... ....+++|||+.|.++.++.... ...++...+...+.++
T Consensus 45 -~~~~~~~e~~~l~~~~---~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi 120 (272)
T cd06637 45 -EEEEIKQEINMLKKYS---HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 120 (272)
T ss_pred -cHHHHHHHHHHHHHhc---CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 0112334444444432 122223333333211 12357999999999998864321 1235555555554454
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|+||+||++. .++++|||...
T Consensus 121 ~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 121 LRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred HHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence 4 6789999999999999999965 48999999764
No 308
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=98.68 E-value=7.9e-08 Score=111.87 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+..+ ++.||||+........ .+-+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~ 54 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASND------------------------------------ARKD 54 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHH------------------------------------HHHH
Confidence 568999999999998743 4899999875322110 1124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------------hcCCCHHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------EKGFSLADVDRKLF 549 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------~~~~~~~~v~~~l~ 549 (1578)
|.+|++.++++. +...+.+.... ......++||||++|.+|.+...-. ...++...+...+.
T Consensus 55 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 129 (280)
T cd05049 55 FEREAELLTNFQ----HENIVKFYGVC-TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAV 129 (280)
T ss_pred HHHHHHHHHhcC----CCCchheeeEE-ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHH
Confidence 566777666653 22222222222 2235678999999999998764311 11233344444444
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+++ +..+|..|++|+|++|+||+++ .++++|||...
T Consensus 130 ~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~ 170 (280)
T cd05049 130 QIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR 170 (280)
T ss_pred HHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccce
Confidence 444 6788999999999999999975 58999999764
No 309
>KOG1187|consensus
Probab=98.68 E-value=7.3e-08 Score=116.94 Aligned_cols=138 Identities=21% Similarity=0.205 Sum_probs=93.7
Q ss_pred ccCC-cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 405 SFDE-NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 405 ~fd~-~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
.|++ +-||.|++|.||+|.+.+|+.||||...++...+ +-+|
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------------------------------~~eF 118 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------------------------------EREF 118 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------------------------------hhHH
Confidence 4554 6899999999999999999999999665443210 2236
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+|...+.++++ ..-|..=....+ .+ .++||-||++.++|.|....... .++-..-.++.+.+. ++.+|..
T Consensus 119 ~~Ei~~ls~l~H----~Nlv~LlGyC~e-~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~ 193 (361)
T KOG1187|consen 119 LNEVEILSRLRH----PNLVKLLGYCLE-GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG 193 (361)
T ss_pred HHHHHHHhcCCC----cCcccEEEEEec-CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 777777777652 222333221111 23 48999999998899887443222 344443333333333 7788875
Q ss_pred C---ccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 G---FVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G---~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
. ++|+|++|.|||+. ..++.|||..
T Consensus 194 ~~~~iiHrDiKssNILLD~~~~aKlsDFGLa 224 (361)
T KOG1187|consen 194 CPPPIIHRDIKSSNILLDEDFNAKLSDFGLA 224 (361)
T ss_pred CCCCEecCCCCHHHeeECCCCCEEccCccCc
Confidence 5 99999999999965 4788999986
No 310
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.67 E-value=1e-07 Score=113.65 Aligned_cols=137 Identities=15% Similarity=0.079 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|+||+|+.. +|+ .||||+..+..... ..-++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 56 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 56 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH------------------------------------HHHHH
Confidence 68999999999999854 454 48999875432110 01123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..|+..+..+ .+...+.+-... ......++|||++|.++.+...-....++...+...+.++. ++.+|..|+
T Consensus 57 ~~e~~~l~~l----~h~niv~~~g~~--~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 57 LDEAYVMASV----DNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred HHHHHHHHhC----CCCCCCeEEEEE--cCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 4455544443 222223332222 23456799999999998876432233456665655555555 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.|||++ .++++|||....+
T Consensus 131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 131 VHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eccccchhheEecCCCcEEEccccccccc
Confidence 9999999999975 4899999977543
No 311
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.67 E-value=1e-07 Score=111.38 Aligned_cols=135 Identities=14% Similarity=0.045 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||.++. .+|+.||||+.+...... .+-.|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 53 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ------------------------------------NTSGW 53 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH------------------------------------HHHHH
Confidence 5689999999988652 378899999886542210 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++. +..-+.+...+.... ...+|+|||++|.++.+.. ....++...+...+.+++ +..+|..|
T Consensus 54 ~~E~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~l~~~~~~~i~~~l~~~l~~lH~~~ 127 (283)
T cd05080 54 KKEINILKTLY----HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNLAQLLLFAQQICEGMAYLHSQH 127 (283)
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHH--HHcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 55665555542 222222222222221 2357999999999998763 345677777776666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .+++.|||...
T Consensus 128 i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 128 YIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred eeccccChheEEEcCCCcEEEeeccccc
Confidence 99999999999975 48899999754
No 312
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.67 E-value=4.8e-08 Score=118.01 Aligned_cols=136 Identities=17% Similarity=0.228 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+....... + ... -.+.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~-------------------------~~~------~~~~~E~ 65 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS----E-------------------------LFA------KRAYREL 65 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccc----h-------------------------HHH------HHHHHHH
Confidence 68999999999999854 8999999987532110 0 000 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +..-+.+..++.. .+...+|||||+ |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 66 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~--~~~~l~~~~~~~i~~qi~~al~~LH~~g 138 (343)
T cd07880 66 RLLKHMK----HENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLM--KHEKLSEDRIQFLVYQMLKGLKYIHAAG 138 (343)
T ss_pred HHHHhcC----CCCccceeeeecCCccccccceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555543 2222333333321 123458999999 76776653 334566665555555554 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||+++ .++++|||....
T Consensus 139 i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 167 (343)
T cd07880 139 IIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred eecCCCCHHHEEEcCCCCEEEeecccccc
Confidence 99999999999965 489999997643
No 313
>KOG0659|consensus
Probab=98.67 E-value=7.6e-08 Score=107.02 Aligned_cols=133 Identities=18% Similarity=0.154 Sum_probs=86.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-+|.|.+|.||+|+. .+|+.||||-.+.+-.. ..++ .+..+|+-+.+|.
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k--------------------dGi~---------~talREIK~Lqel 58 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK--------------------DGIN---------RTALREIKLLQEL 58 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeeccccc--------------------cCcc---------HHHHHHHHHHHHc
Confidence 4589999999999994 58999999977655211 1111 1222333333333
Q ss_pred H--HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 R--NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~--n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+ |.-.+... +... +.-.||.||++- .|..+..-...-+++..+-..+..++ ++.+|.+.++|
T Consensus 59 ~h~nIi~LiD~------------F~~~-~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH 124 (318)
T KOG0659|consen 59 KHPNIIELIDV------------FPHK-SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH 124 (318)
T ss_pred cCcchhhhhhh------------ccCC-CceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 2 22233322 2222 233589999953 44444333344567788877777766 88899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|+|++ .+++-|||..
T Consensus 125 RDlKPnNLLis~~g~lKiADFGLA 148 (318)
T KOG0659|consen 125 RDLKPNNLLISSDGQLKIADFGLA 148 (318)
T ss_pred ccCCccceEEcCCCcEEeecccch
Confidence 99999999965 5888888865
No 314
>cd03007 PDI_a_ERp29_N PDIa family, endoplasmic reticulum protein 29 (ERp29) subfamily; ERp29 is a ubiquitous ER-resident protein expressed in high levels in secretory cells. It forms homodimers and higher oligomers in vitro and in vivo. It contains a redox inactive TRX-like domain at the N-terminus, which is homologous to the redox active TRX (a) domains of PDI, and a C-terminal helical domain similar to the C-terminal domain of P5. The expression profile of ERp29 suggests a role in secretory protein production distinct from that of PDI. It has also been identified as a member of the thyroglobulin folding complex. The Drosophila homolog, Wind, is the product of windbeutel, an essential gene in the development of dorsal-ventral patterning. Wind is required for correct targeting of Pipe, a Golgi-resident type II transmembrane protein with homology to 2-O-sulfotransferase.
Probab=98.67 E-value=3.1e-09 Score=106.91 Aligned_cols=76 Identities=16% Similarity=0.080 Sum_probs=55.4
Q ss_pred cccccccccccccCCccCccceecccc--cccc---ccccchHHHHHHHHHhcCCCcceeeeee------cccCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYS--DWCF---ACLQVEPIFKKLMDELSPLGVGFFTVHY------DLFGTTDGFS 816 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYA--pwCg---hCk~LaP~weklA~~Lk~~~vg~v~~~~------~~~~~~~~i~ 816 (1578)
+.|+..||++.| ++++.+||+||| |||+ ||++|+|+|.++|+. ..++-|+|+. ..+|+.++++
T Consensus 4 v~L~~~nF~~~v---~~~~~vlV~F~A~~Pwc~k~~~~~~LA~e~~~aa~~---v~lakVd~~d~~~~~~~~L~~~y~I~ 77 (116)
T cd03007 4 VDLDTVTFYKVI---PKFKYSLVKFDTAYPYGEKHEAFTRLAESSASATDD---LLVAEVGIKDYGEKLNMELGERYKLD 77 (116)
T ss_pred eECChhhHHHHH---hcCCcEEEEEeCCCCCCCChHHHHHHHHHHHhhcCc---eEEEEEecccccchhhHHHHHHhCCC
Confidence 567888999988 467889999999 9999 999999999998875 2344444421 1255555555
Q ss_pred CCccccccccccccCccccccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~~~ 840 (1578)
. ..|||+++|..+
T Consensus 78 ~-----------~gyPTl~lF~~g 90 (116)
T cd03007 78 K-----------ESYPVIYLFHGG 90 (116)
T ss_pred c-----------CCCCEEEEEeCC
Confidence 0 034999999976
No 315
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.67 E-value=1.1e-07 Score=98.99 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=87.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++++.|+.+.||+++..+ +.++||+..+... +.++..|..
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---------------------------------------~~~~~~e~~ 43 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---------------------------------------GADREREVA 43 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc---------------------------------------hhHHHHHHH
Confidence 679999999999999754 7899998765421 124567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC--CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHH---cCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS--STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQ---TGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~--t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~---~G~vH 563 (1578)
.++++++. ...+|+++.... +..+++|||++|.++... . ......+...+.+. +..+|. .|++|
T Consensus 44 ~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-~----~~~~~~~~~~~~~~-l~~lh~~~~~~i~H 112 (155)
T cd05120 44 ILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEV-S----EEEKEDIAEQLAEL-LAKLHQLPLLVLCH 112 (155)
T ss_pred HHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccC-C----HHHHHHHHHHHHHH-HHHHhCCCceEEEe
Confidence 77777653 356788775443 358999999999988764 0 01122333343333 556665 48999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+|+||+|||+. .++++|||..
T Consensus 113 ~Dl~~~Nil~~~~~~~~l~Df~~~ 136 (155)
T cd05120 113 GDLHPGNILVDDGKILGIIDWEYA 136 (155)
T ss_pred cCCCcceEEEECCcEEEEEecccc
Confidence 99999999964 4777777754
No 316
>KOG0610|consensus
Probab=98.67 E-value=6.9e-08 Score=113.13 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|.+|.||.|+++ ++..-|+||.-...-.. -+.+.+ . ..|.
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~-------rkKl~R----a-----------------------~tE~ 128 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS-------RKKLKR----A-----------------------QTER 128 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh-------hhHHHH----H-----------------------HHHH
Confidence 57899999999999987 46899999984321110 000000 0 1122
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceE--EEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHH--HHHHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRV--LTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFT--AFAEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~V--LVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~--~~l~~i~~~G~v 562 (1578)
.-+..+ ++ --+|..|-.+.|+++ |||||+.|..|..+..-+..+.=.+..++ -+.+ +.++.+|-.|||
T Consensus 129 eIL~~l-----DH--PFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGiv 201 (459)
T KOG0610|consen 129 EILSLL-----DH--PFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIV 201 (459)
T ss_pred HHHHhc-----CC--CccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhcee
Confidence 222222 22 357899988888875 99999999999876443222221222222 2222 238999999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
-||+||.|||++ .|-+.||....+.
T Consensus 202 YRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 202 YRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred eccCCcceeEEecCCcEEeeeccccccC
Confidence 999999999976 4788888866544
No 317
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.67 E-value=9.9e-08 Score=109.48 Aligned_cols=134 Identities=13% Similarity=0.117 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEecCCC-----------EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGV-----------EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~-----------~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.||.|++|.||+|+.++.. .|++|+..+....
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~------------------------------------ 44 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD------------------------------------ 44 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh------------------------------------
Confidence 35899999999999987432 4777765433110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+..|.+|+..+.++ .+...+.+...... ...+|||||++|.+|.+........++...+...+.+++ +..
T Consensus 45 --~~~~~~e~~~l~~l----~h~~i~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 45 --SLAFFETASLMSQL----SHKHLVKLYGVCVR--DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred --HHHHHHHHHHHHcC----CCcchhheeeEEec--CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 12334454444433 23222333333322 567999999999999887543333466666655555554 688
Q ss_pred HHHcCccccCCCCCCCCCC----------eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT----------WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~----------~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.|||+. .+++.|||....
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 9999999999999999954 388999997654
No 318
>KOG0714|consensus
Probab=98.66 E-value=1.8e-08 Score=118.81 Aligned_cols=68 Identities=46% Similarity=0.881 Sum_probs=63.8
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh--hHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--TAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|+|++|||.+.|+.++|++||++++++||||+++.+ .+..+|.++.+||++|+|+.+|..||.+|.
T Consensus 2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~ 71 (306)
T KOG0714|consen 2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE 71 (306)
T ss_pred cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc
Confidence 46999999999999999999999999999999998876 566689999999999999999999999998
No 319
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=98.66 E-value=3e-07 Score=106.20 Aligned_cols=137 Identities=19% Similarity=0.149 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecch-hhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYID-LRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~-i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|+||+|+. .+|+.||||..... ... .....+|.+|
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------------~~~~~~~~~e 52 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMD-----------------------------------AKARADCIKE 52 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhh-----------------------------------HHHHHHHHHH
Confidence 5799999999999995 58999999965421 000 0111244556
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+-+.++. +..-+.+-..+.+ ....+++|||++|.++.++... . ...++...+...+.+++ +..+|..|+
T Consensus 53 ~~~l~~~~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 127 (267)
T cd08229 53 IDLLKQLN----HPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV 127 (267)
T ss_pred HHHHHHcc----CCchhhhhheeEe-CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 55555442 2221222222211 1345799999999999886431 1 12345555555555554 688999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .+++.|||...
T Consensus 128 ~H~dl~p~nili~~~~~~~l~dfg~~~ 154 (267)
T cd08229 128 MHRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred ecCCCCHHHEEEcCCCCEEECcchhhh
Confidence 9999999999965 58999999754
No 320
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=98.66 E-value=1.4e-07 Score=109.35 Aligned_cols=134 Identities=15% Similarity=0.112 Sum_probs=86.6
Q ss_pred ccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.||.|++|.||+|... ++..||+|..+.... ...+.+|.+|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------------------------------------~~~~~~~~~E 45 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------------------------------------VQEQMKFLEE 45 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------------------------------------hHHHHHHHHH
Confidence 5899999999999865 346799997643211 0122356677
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----cCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----KGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+..+.++. +...+.+-... ...+..+|||||++|.+|.++..-.. ...+...+...+.++. +..+|..|
T Consensus 46 ~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 120 (269)
T cd05087 46 AQPYRSLQ----HSNLLQCLGQC-TEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120 (269)
T ss_pred HHHHHhCC----CCCEeeEEEEE-cCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 77666653 22222222222 22345689999999999987643211 1223333333333333 67889999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
++|+|++|.||++. .++++|||..
T Consensus 121 i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 121 FIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred EeccccCcceEEEcCCCcEEECCcccc
Confidence 99999999999976 4899999965
No 321
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.66 E-value=9.9e-08 Score=109.82 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|..++++.+|||+..++... +-+|..|..
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 51 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS--------------------------------------EDDFIEEAK 51 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 568999999999999888889999987543210 012334444
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++. ++. +++.+. ......++||||++|.+|.+........++...+...+.++. +..+|..|++|+
T Consensus 52 ~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 124 (256)
T cd05059 52 VMMKLS-----HPN--LVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHR 124 (256)
T ss_pred HHHhCC-----CCC--EEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 444432 232 233332 233456899999999999886432223355555555554444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 125 dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 125 DLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred cccHhhEEECCCCcEEECCcccce
Confidence 9999999964 48999999753
No 322
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=98.66 E-value=1.5e-07 Score=108.46 Aligned_cols=138 Identities=17% Similarity=0.112 Sum_probs=87.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|+.|++|+||+|+.. +|+.||||+.+..-.. .- . ...++..|.
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~-------~~--------------------~-------~~~~~~~e~ 47 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI-------AK--------------------N-------QVTNVKAER 47 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh-------HH--------------------H-------HHHHHHHHH
Confidence 57999999999999865 7999999987532100 00 0 000112221
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+. ....+...+.+...+. ....-+|+|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 48 ~~~~---~~~~~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~d 122 (260)
T cd05611 48 AIMM---IQGESPYVAKLYYSFQ-SKDYLYLVMEYLNGGDCASLIK-TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRD 122 (260)
T ss_pred HHHh---hcCCCCCeeeeeeeEE-cCCeEEEEEeccCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 1111 1112222233333322 1234689999999999988743 223456666666555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 123 l~p~nil~~~~~~~~l~dfg~~~ 145 (260)
T cd05611 123 IKPENLLIDQTGHLKLTDFGLSR 145 (260)
T ss_pred CCHHHeEECCCCcEEEeecccce
Confidence 999999965 58999999654
No 323
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.66 E-value=6.6e-08 Score=117.23 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=84.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+......... ...++.+|.
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 67 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 67 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChH-----------------------------------HHHHHHHHH
Confidence 68999999999999864 789999998754321100 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+..+ .+..-+.+..++.. .....+|||||++|. +.+. ....++...+...+.+++ +..+|..|
T Consensus 68 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~g 139 (355)
T cd07874 68 VLMKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_pred HHHHHh----CCCchhceeeeeeccccccccceeEEEhhhhccc-HHHH---HhhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 333333 22222333333321 112357999999874 3222 123456666555555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+||++. .++++|||...
T Consensus 140 ivHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 140 IIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cccCCCChHHEEECCCCCEEEeeCcccc
Confidence 99999999999975 58999999764
No 324
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.66 E-value=8.1e-08 Score=113.48 Aligned_cols=136 Identities=17% Similarity=0.169 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|..+....... ..++.+|.
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 55 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 55 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------------------------------hhHHHHHH
Confidence 67999999999999865 789999998754321110 00123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-..+. .....+|||||++| .+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----h~nI~~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~d 129 (301)
T cd07873 56 SLLKDLK----HANIVTLHDIIH-TEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRD 129 (301)
T ss_pred HHHHhcC----CCCcceEEEEEe-cCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 4444442 322233333332 22346799999986 55444222233456666655555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 130 lkp~Nil~~~~~~~kl~dfg~~~~ 153 (301)
T cd07873 130 LKPQNLLINERGELKLADFGLARA 153 (301)
T ss_pred CCHHHEEECCCCcEEECcCcchhc
Confidence 999999975 589999997643
No 325
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=98.66 E-value=8.3e-08 Score=113.08 Aligned_cols=137 Identities=18% Similarity=0.186 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEecC-------------C--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-------------G--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-------------G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
+.||.|++|.||+|+... | ..||||+.+++.....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------ 60 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA------------------------------ 60 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH------------------------------
Confidence 569999999999997542 2 3489999887543210
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------cCCCHH
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------KGFSLA 542 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------~~~~~~ 542 (1578)
.-+|.+|.+.+.++. +...+.+-..+. .....+|||||++|.+|.+...... ...+..
T Consensus 61 ------~~~~~~ei~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~ 129 (295)
T cd05097 61 ------RNDFLKEIKIMSRLK----NPNIIRLLGVCV-SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIA 129 (295)
T ss_pred ------HHHHHHHHHHHHhCC----CCCcCeEEEEEc-CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHH
Confidence 113456666666653 222233323222 2355689999999999988643211 013444
Q ss_pred HHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 543 DVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 543 ~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+...+.+++ +..+|..|++|+|++|+||+++ .++++|||....
T Consensus 130 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~ 178 (295)
T cd05097 130 NLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRN 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccc
Confidence 5555555544 6788999999999999999975 489999997643
No 326
>PTZ00284 protein kinase; Provisional
Probab=98.66 E-value=8.3e-08 Score=121.04 Aligned_cols=136 Identities=15% Similarity=0.121 Sum_probs=84.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+.... ..+. +..|.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--------------------------------~~~~------~~~e~ 176 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--------------------------------YTRD------AKIEI 176 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecchh--------------------------------hHHH------HHHHH
Confidence 57999999999999965 689999999752100 0001 12233
Q ss_pred HHHHHHHHh--hCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcc
Q psy12972 488 RNAERCSKD--LAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~--~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~v 562 (1578)
+.+++++.. ..+...+.+...+..-...-+||||+. |..+.+... ....++...+...+.+++ +..+|. .|++
T Consensus 177 ~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIi 254 (467)
T PTZ00284 177 QFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVALDYFHTELHLM 254 (467)
T ss_pred HHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcCCee
Confidence 333333221 011122333344433334568999998 556655432 223466666666665555 788897 5999
Q ss_pred ccCCCCCCCCCC-------------------eeEEecCCch
Q psy12972 563 HADPHSGNDVNT-------------------WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~-------------------~v~liDfG~~ 584 (1578)
|||+||.|||+. .++++|||..
T Consensus 255 HrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~ 295 (467)
T PTZ00284 255 HTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGC 295 (467)
T ss_pred cCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCcc
Confidence 999999999974 3788999954
No 327
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.66 E-value=1.3e-07 Score=110.42 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+.+ +|+ .||+|+....... .....+
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~------------------------------------~~~~~~ 56 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP------------------------------------KANKEI 56 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH------------------------------------HHHHHH
Confidence 68999999999999965 454 6899977543210 011235
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|+..+.++. +..-+.+..... ++..++||||++|.++.+........++...+...+.++. +..+|..|+
T Consensus 57 ~~e~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 130 (279)
T cd05057 57 LDEAYVMASVD----HPHVVRLLGICL--SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL 130 (279)
T ss_pred HHHHHHHHhCC----CCCcceEEEEEe--cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 66777776653 333344444443 3677899999999999886433233466777766666655 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .+++.|||....
T Consensus 131 ~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 131 VHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EecccCcceEEEcCCCeEEECCCccccc
Confidence 9999999999964 589999997643
No 328
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.66 E-value=1.2e-07 Score=108.68 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+++|.|++|+||+|+.+ +|+.||||......... . ..-.+.+|.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-------------------------~----------~~~~~~~e~ 50 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-------------------------R----------ERKAAEQEA 50 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-------------------------H----------HHHHHHHHH
Confidence 57899999999999965 68999999864221100 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+.......+|+|||++|.++.+...-. ...++...+...+.++. +..+|..|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~ 126 (257)
T cd08223 51 QLLSQLK----HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHR 126 (257)
T ss_pred HHHHhCC----CCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence 5444442 2222333333322223357999999999987764321 22356666666655555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 127 di~p~nil~~~~~~~~l~df~~~~ 150 (257)
T cd08223 127 DLKTQNVFLTRTNIIKVGDLGIAR 150 (257)
T ss_pred CCCchhEEEecCCcEEEecccceE
Confidence 9999999965 58999999754
No 329
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.66 E-value=6.7e-08 Score=113.08 Aligned_cols=140 Identities=17% Similarity=0.161 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .. ..++..|.
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~--------------------~~---------------~~~~~~e~ 50 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED--------------------GL---------------PLSTVREV 50 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC--------------------CC---------------chHHHHHH
Confidence 46899999999999965 79999999876432110 00 00112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+-+.+++. +.+...+.+-.++... ...-+++|||++| .+.+.... ...+++...+...+.+++ +..+|..|
T Consensus 51 ~~l~~l~~-~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 128 (288)
T cd07863 51 ALLKRLEA-FDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC 128 (288)
T ss_pred HHHHHhhh-cCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444332 1222222222222211 1234799999987 45444221 123466666666666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 129 ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 129 IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eecCCCCHHHEEECCCCCEEECccCccc
Confidence 99999999999965 48999999753
No 330
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.66 E-value=6.2e-08 Score=112.39 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|+.. +|+.||+|+..+..-..- ..+-.+..|+
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~ 52 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE----------------------------------KKVKYVKIEK 52 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccch----------------------------------HHHHHHHHHH
Confidence 57999999999999976 799999999764211000 0011223344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. .++ .+++++.- ..+..++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 53 ~~~~~l~----~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H 125 (280)
T cd05581 53 EVLTRLN----GHP--GIIKLYYTFQDEENLYFVLEYAPNGELLQYIR-KYGSLDEKCTRFYAAEILLALEYLHSKGIIH 125 (280)
T ss_pred HHHHhcc----cCC--CchhHHHHhcCCceEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4443332 111 12222211 2245679999999999987643 223566666666655555 67899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||+++ .++++|||...
T Consensus 126 ~dl~~~ni~i~~~~~~~l~df~~~~ 150 (280)
T cd05581 126 RDLKPENILLDKDMHIKITDFGTAK 150 (280)
T ss_pred cCCCHHHeEECCCCCEEecCCcccc
Confidence 99999999975 58999999764
No 331
>KOG0608|consensus
Probab=98.66 E-value=2.8e-08 Score=120.07 Aligned_cols=138 Identities=19% Similarity=0.313 Sum_probs=91.4
Q ss_pred hhccccCCcccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
..|..+ ++||.|.||.|-.++--| ....|.|-+| +.|+ +.+.=...+..
T Consensus 629 SmFvki--k~iGvGAFGeV~Lv~KvDT~~lYAmKTLr-------KaDV---------------------l~rnQvaHVKA 678 (1034)
T KOG0608|consen 629 SMFVKI--KTIGVGAFGEVCLVRKVDTRALYAMKTLR-------KADV---------------------LMRNQVAHVKA 678 (1034)
T ss_pred cceEEE--eeecccccceeEEEeecchhhHHHHhhhH-------HHHH---------------------Hhhhhhhhhhh
Confidence 356666 899999999999887433 2233444322 1121 11222345667
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHH---HHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFT---AFAE 554 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~---~~l~ 554 (1578)
|-|...||.|- + |-+.|..+-.+ -+.|||||+|+.+-.+ |.+.|+=++++++-.+. ...+
T Consensus 679 ERDILAEADn~-----------W--VVrLyySFQDkdnLYFVMdYIPGGDmMSL--LIrmgIFeE~LARFYIAEltcAie 743 (1034)
T KOG0608|consen 679 ERDILAEADNE-----------W--VVRLYYSFQDKDNLYFVMDYIPGGDMMSL--LIRMGIFEEDLARFYIAELTCAIE 743 (1034)
T ss_pred hhhhHhhcCCc-----------c--eEEEEEEeccCCceEEEEeccCCccHHHH--HHHhccCHHHHHHHHHHHHHHHHH
Confidence 77777777552 3 33555444333 3689999999988766 56788888888884432 2378
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCc
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~ 583 (1578)
.+|..||+|||+||.|||+. .+++.|||+
T Consensus 744 sVHkmGFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 744 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred HHHhccceecccCccceEEccCCceeeeeccc
Confidence 99999999999999999953 366666663
No 332
>KOG0585|consensus
Probab=98.65 E-value=8.8e-08 Score=113.54 Aligned_cols=147 Identities=18% Similarity=0.116 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||+|++|.|-+|+. -+|+-|||||....-.. ..+.++.-- ...+..--+-++|.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~---------------~~~~~~~~~--------a~~~~~~ekv~~EI 159 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELR---------------RQYGFPRQP--------AMKLMPIEKVRREI 159 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhh---------------hhccccccc--------ccccCcHHHHHHHH
Confidence 4589999999999995 48999999998532100 011111000 00000011346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCc-eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH-HHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSST-RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF-TAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~-~~~--l~~i~~~G~vH 563 (1578)
..+.++. |..-|..-+|+.+-.++ -+||.||+.+..+....... .-++. .-++..+ ++. ++.+|.+|++|
T Consensus 160 ailKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~-~els~-~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 160 AILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDK-PELSE-QQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCc-ccccH-HHHHHHHHHHHHHHHHHHhcCeec
Confidence 7777765 34456777777766544 56999999998887642211 11222 2333333 333 89999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|+|++ .+++-|||-.
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred cccchhheEEcCCCcEEeecccee
Confidence 99999999965 6999999954
No 333
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.65 E-value=1.1e-07 Score=113.08 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=86.6
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+...||.|++|.||+|+.+ +++.||||+....-.. .+.
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~---------------------------------------~~~ 45 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS---------------------------------------MSA 45 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc---------------------------------------HHH
Confidence 3467999999999999865 5689999976431100 012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc-eEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSST-RVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~-~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~-- 552 (1578)
.+|++.+.++. +...+.+-..+...... -+|+|||++| .+.++.... ...++...+...+.+++
T Consensus 46 ~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a 120 (317)
T cd07868 46 CREIALLRELK----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 120 (317)
T ss_pred HHHHHHHHhcC----CCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHH
Confidence 34555555542 33334444544333333 4699999976 444432211 11244444544445544
Q ss_pred HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 121 l~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred HHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 788999999999999999997 259999999764
No 334
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=98.65 E-value=1.5e-07 Score=107.77 Aligned_cols=137 Identities=16% Similarity=0.123 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.|++|+....-... ...-++.+|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~e~ 50 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR-----------------------------------REREEAIDEA 50 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH-----------------------------------HHHHHHHHHH
Confidence 57999999999999975 79999999764211000 0112345556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+...+ ......+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~ 125 (256)
T cd08529 51 RVLAKLD----SSYIIRYYESF-LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHR 125 (256)
T ss_pred HHHHhcC----CCCeehheeee-ccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5555443 22212222222 1224568999999999998874322 23456666655555544 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .+++.|||...
T Consensus 126 dl~~~nili~~~~~~~l~df~~~~ 149 (256)
T cd08529 126 DIKSLNLFLDAYDNVKIGDLGVAK 149 (256)
T ss_pred CCCcceEEEeCCCCEEEcccccce
Confidence 9999999965 58999999654
No 335
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.65 E-value=1.3e-07 Score=109.05 Aligned_cols=133 Identities=18% Similarity=0.102 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...++..||||+.+++-.. .-+|.+|++
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~--------------------------------------~~~~~~e~~ 53 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 53 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH--------------------------------------HHHHHHHHH
Confidence 679999999999999888889999987653210 012455655
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.++++. +...+.+...+.+ ...+++|||++|.++.+...-. ....+...+...+.++. +..+|..|++|+|
T Consensus 54 ~l~~l~----~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d 127 (260)
T cd05073 54 VMKTLQ----HDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 127 (260)
T ss_pred HHHhcC----CCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 555443 3334555555543 5568999999999998764321 12244444444444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .+++.|||...
T Consensus 128 l~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 128 LRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred cCcceEEEcCCCcEEECCCccee
Confidence 999999965 48889999654
No 336
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=98.64 E-value=1.8e-07 Score=107.18 Aligned_cols=134 Identities=19% Similarity=0.243 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|++|++|+||+|+..+ |+.||+|+...... .-++.+|.
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------------------------------~~~~~~e~ 49 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---------------------------------------LQEIIKEI 49 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---------------------------------------HHHHHHHH
Confidence 468999999999999774 89999998743210 01344555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+...+.+ ....+++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 50 ~~~~~l----~~~~i~~~~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~d 124 (256)
T cd06612 50 SILKQC----DSPYIVKYYGSYFK-NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRD 124 (256)
T ss_pred HHHHhC----CCCcEeeeeeeeec-CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 555554 22222333333322 2445799999999999987544445566666666555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .+++.|||....
T Consensus 125 l~~~ni~~~~~~~~~l~dfg~~~~ 148 (256)
T cd06612 125 IKAGNILLNEEGQAKLADFGVSGQ 148 (256)
T ss_pred CCcceEEECCCCcEEEcccccchh
Confidence 999999965 588999997644
No 337
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=98.64 E-value=1.4e-07 Score=116.51 Aligned_cols=46 Identities=17% Similarity=0.090 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+...+...+.++. +..+|..|++|+|++|.|||++ .++++|||...
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~ 285 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR 285 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcce
Confidence 3333444444443 6789999999999999999965 48999999764
No 338
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.64 E-value=1.4e-07 Score=109.06 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..++..||||+.++.... +-+|.+|++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~--------------------------------------~~~~~~E~~ 53 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 53 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC--------------------------------------HHHHHHHHH
Confidence 358999999999999877778999987642110 013456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+. ....++||||++|.++.++.... ...++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~l~~l~----~~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~d 127 (262)
T cd05071 54 VMKKLR----HEKLVQLYAVVS--EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 127 (262)
T ss_pred HHHhCC----CCCcceEEEEEC--CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 666653 222233333332 23468999999999998764321 12345555555554444 6779999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+||++. .++++|||....
T Consensus 128 l~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 128 LRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred cCcccEEEcCCCcEEeccCCceee
Confidence 999999965 488999997643
No 339
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.64 E-value=9.8e-08 Score=116.21 Aligned_cols=134 Identities=15% Similarity=0.156 Sum_probs=84.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|... +|+.||||+........- ..-++.+|.
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 74 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 74 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCch-----------------------------------hHHHHHHHH
Confidence 67999999999999864 789999998753321100 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..++.+ .+...+.+..++.. .....++||||++|. +.+. ....++...+...+.+++ +..+|..|
T Consensus 75 ~~l~~l----~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~ 146 (364)
T cd07875 75 VLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 146 (364)
T ss_pred HHHHhc----CCCCccccceeecccccccccCeEEEEEeCCCCC-HHHH---HHhcCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 333333 22222222222221 112357999999873 3332 123456665555555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 147 ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 147 IIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred eecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 99999999999975 59999999764
No 340
>KOG0611|consensus
Probab=98.64 E-value=5.9e-08 Score=112.12 Aligned_cols=135 Identities=19% Similarity=0.186 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-+|.|.+|.|-+|.. +.|+.||||..+.+--+. +.||--+ ++|.
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-eqDlvhI---------------------------------RREI 104 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-EQDLVHI---------------------------------RREI 104 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-HHHHHHH---------------------------------HHHH
Confidence 5689999999999996 689999999776442110 1222222 3333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH---HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF---AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~---l~~i~~~G~vH~ 564 (1578)
+-+..+ .+...|.|-.|+. -..+-||||||..|+.|.|+.. +...++..+ ++.+++.+ ....|.++++|+
T Consensus 105 eIMSsL----NHPhII~IyEVFE-NkdKIvivMEYaS~GeLYDYiS-er~~LsErE-aRhfFRQIvSAVhYCHknrVvHR 177 (668)
T KOG0611|consen 105 EIMSSL----NHPHIIQIYEVFE-NKDKIVIVMEYASGGELYDYIS-ERGSLSERE-ARHFFRQIVSAVHYCHKNRVVHR 177 (668)
T ss_pred HHHhhc----CCCceeehhhhhc-CCceEEEEEEecCCccHHHHHH-HhccccHHH-HHHHHHHHHHHHHHHhhccceec
Confidence 333222 2233355555553 3567799999999999999854 233344333 33333333 567899999999
Q ss_pred CCCCCCCCCC---eeEEecCCch
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++-.|||+. .+++.|||..
T Consensus 178 DLKLENILLD~N~NiKIADFGLS 200 (668)
T KOG0611|consen 178 DLKLENILLDQNNNIKIADFGLS 200 (668)
T ss_pred ccchhheeecCCCCeeeeccchh
Confidence 9999999964 4899999975
No 341
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=98.64 E-value=1.5e-07 Score=109.15 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEec-CC---CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EG---VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G---~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+-||.|++|.||+|+.+ +| ..||||+......... .-+|.
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 53 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQ------------------------------------RRDFL 53 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHH------------------------------------HHHHH
Confidence 56899999999999975 34 3699998764321100 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|+..+.++. +...+.+...+ .-....++||||++|.+|.+........++...+...+.+++ +..+|..|++
T Consensus 54 ~e~~~l~~l~----h~ni~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~ 128 (269)
T cd05065 54 SEASIMGQFD----HPNIIHLEGVV-TKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYV 128 (269)
T ss_pred HHHHHHHhCC----CcCcceEEEEE-CCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5655555442 22223333333 223456899999999999876543334466666666555544 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .+++.|||..
T Consensus 129 H~dl~p~nili~~~~~~kl~dfg~~ 153 (269)
T cd05065 129 HRDLAARNILVNSNLVCKVSDFGLS 153 (269)
T ss_pred ecccChheEEEcCCCcEEECCCccc
Confidence 999999999964 4888999965
No 342
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=98.64 E-value=9.3e-08 Score=110.21 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|..+ +|+.||+|+........ .+-++.+|.
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~e~ 50 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA------------------------------------IQKQILREL 50 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH------------------------------------HHHHHHHHH
Confidence 57899999999999976 79999999876543211 011223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
..+.++. +..-+.+...+. ....-+|+|||++|.+|.++.......++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~ 125 (265)
T cd06605 51 DILHKCN----SPYIVGFYGAFY-NNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHR 125 (265)
T ss_pred HHHHHCC----CCchhhhheeee-cCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecC
Confidence 4444332 111122222221 12456799999999999887543224456666555555554 678899 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|+||++. .++++|||....+
T Consensus 126 dl~~~ni~~~~~~~~~l~d~g~~~~~ 151 (265)
T cd06605 126 DVKPSNILVNSRGQIKLCDFGVSGQL 151 (265)
T ss_pred CCCHHHEEECCCCCEEEeecccchhh
Confidence 9999999965 5899999976544
No 343
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.64 E-value=2e-07 Score=108.75 Aligned_cols=135 Identities=19% Similarity=0.162 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+ +||||+.+...... .+-++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~------------------------------------~~~~~ 56 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK------------------------------------ANKEI 56 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH------------------------------------HHHHH
Confidence 6799999999999985 4665 48999875432110 01123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|+..+.++. ++.+ ++++. .......++|||++|.++.+...-....++...+...+.++. +..+|..|
T Consensus 57 ~~e~~~l~~~~-----~~~i--~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 129 (279)
T cd05109 57 LDEAYVMAGVG-----SPYV--CRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129 (279)
T ss_pred HHHHHHHHhcC-----CCCC--ceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44554444432 2222 22221 123456799999999998776432223466666666666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 130 iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 130 LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred eeccccccceEEEcCCCcEEECCCCceee
Confidence 99999999999975 489999997643
No 344
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.63 E-value=1.2e-07 Score=110.44 Aligned_cols=136 Identities=18% Similarity=0.188 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..|++|++|+||+|+.+ +|+.||+|+........ . . +-.+..|+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--------------------~---------~------~~~~~~e~ 51 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP--------------------V---------I------KKIALREI 51 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc--------------------c---------c------cHHHHHHH
Confidence 46899999999999976 69999999875321100 0 0 00124455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+. .....++||||++|..+..+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~~~----h~~i~~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~d 125 (286)
T cd07847 52 RMLKQLK----HPNLVNLIEVFR-RKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRD 125 (286)
T ss_pred HHHHhCC----CCCEeeeeeEEe-eCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 5444442 222233333332 2345679999999987766532 223466666666666665 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .+++.|||...
T Consensus 126 l~p~nil~~~~~~~~l~dfg~~~ 148 (286)
T cd07847 126 VKPENILITKQGQIKLCDFGFAR 148 (286)
T ss_pred CChhhEEEcCCCcEEECccccce
Confidence 999999965 48888998764
No 345
>cd02999 PDI_a_ERp44_like PDIa family, endoplasmic reticulum protein 44 (ERp44)-like subfamily; composed of uncharacterized PDI-like eukaryotic proteins containing only one redox active TRX (a) domain with a CXXS motif, similar to ERp44. CXXS is still a redox active motif; however, the mixed disulfide formed with the substrate is more stable than those formed by CXXC motif proteins. PDI-related proteins are usually involved in the oxidative protein folding in the ER by acting as catalysts and folding assistants. ERp44 is involved in thiol-mediated retention in the ER.
Probab=98.63 E-value=1e-08 Score=101.41 Aligned_cols=63 Identities=16% Similarity=0.296 Sum_probs=46.4
Q ss_pred ccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec-c---cCccccccCCccccccccccccCccccccc
Q psy12972 763 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD-L---FGTTDGFSGQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 763 ~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~-~---~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
..+++++|.||||||+||++++|.|+++++.+.+..+ +.++.+ . +++. .++..+||+.+|.
T Consensus 16 ~~g~~vlV~F~a~WC~~C~~~~p~l~~la~~~~~~~~--~~vd~~~~~~~l~~~-------------~~V~~~PT~~lf~ 80 (100)
T cd02999 16 NREDYTAVLFYASWCPFSASFRPHFNALSSMFPQIRH--LAIEESSIKPSLLSR-------------YGVVGFPTILLFN 80 (100)
T ss_pred cCCCEEEEEEECCCCHHHHhHhHHHHHHHHHhccCce--EEEECCCCCHHHHHh-------------cCCeecCEEEEEc
Confidence 4678999999999999999999999999999976433 333222 1 2222 3345559999988
Q ss_pred cc
Q psy12972 839 EG 840 (1578)
Q Consensus 839 ~~ 840 (1578)
.+
T Consensus 81 ~g 82 (100)
T cd02999 81 ST 82 (100)
T ss_pred CC
Confidence 76
No 346
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.63 E-value=1.2e-07 Score=118.63 Aligned_cols=148 Identities=17% Similarity=0.143 Sum_probs=89.1
Q ss_pred HHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHH
Q psy12972 392 LEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVI 470 (1578)
Q Consensus 392 ~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~ 470 (1578)
..+.+.....-|.-. +.||.|++|.||+|+.. +|+.||||+...+...
T Consensus 57 ~~~~~~~~~~~y~~~--~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~----------------------------- 105 (440)
T PTZ00036 57 DNDINRSPNKSYKLG--NIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY----------------------------- 105 (440)
T ss_pred hhhhccCcCCeEEEe--EEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch-----------------------------
Confidence 333333333334433 67999999999999975 7899999976321100
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC-----Cc--eEEEEeccCCCcCCchhh-H--hhcCCC
Q psy12972 471 NELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS-----ST--RVLTTEFIDGVKISDKEG-L--LEKGFS 540 (1578)
Q Consensus 471 ~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~--~VLVME~i~G~~l~d~~~-l--~~~~~~ 540 (1578)
..+|...+.++ .+...|.+...+..-+ .. -+|||||++| .+.+... . ....++
T Consensus 106 ------------~~~Ei~il~~l----~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~ 168 (440)
T PTZ00036 106 ------------KNRELLIMKNL----NHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALP 168 (440)
T ss_pred ------------HHHHHHHHHhc----CCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCC
Confidence 01244444433 2333343333332111 11 2489999987 3433321 1 123455
Q ss_pred HHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchhhh
Q psy12972 541 LADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKFRL 587 (1578)
Q Consensus 541 ~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~~l 587 (1578)
...+...+.+++ +..+|..|++|||++|.|||+. .++++|||....+
T Consensus 169 ~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~ 221 (440)
T PTZ00036 169 LFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL 221 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence 555544444444 7889999999999999999974 3899999987543
No 347
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.63 E-value=1.7e-07 Score=109.49 Aligned_cols=138 Identities=17% Similarity=0.095 Sum_probs=87.5
Q ss_pred ccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.||.|++|+||+|+.. +|+.||||+..+........ +.-+..|..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~----------------------------------~~~~~~~~~ 46 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------------------------------ETLALNERI 46 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh----------------------------------HHHHHHHHH
Confidence 3799999999999864 79999999876431110000 001122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.++..+. . +++. ++..+..+ ....++||||+.|..|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 47 ~~~~~~~-~-~~~~--i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 121 (278)
T cd05606 47 MLSLVST-G-DCPF--IVCMSYAFHTPDKLSFILDLMNGGDLHYHLS-QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYR 121 (278)
T ss_pred HHHHHHh-C-CCCc--EeeeeeeeecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcC
Confidence 2322222 1 2232 23333222 234579999999999977542 223456666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 122 di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 122 DLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred CCCHHHEEECCCCCEEEccCcCccc
Confidence 9999999965 589999997643
No 348
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=98.63 E-value=1.5e-07 Score=109.01 Aligned_cols=137 Identities=20% Similarity=0.211 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-C---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.+ + +..||||..++..... ..-+|.
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~ 53 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK------------------------------------QRRDFL 53 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH------------------------------------HHHHHH
Confidence 57899999999999864 3 3479999876542110 011345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.|...+.++ .+...+.+...+. .....+|||||++|.+|.+........++...+...+.++. +..+|..|++
T Consensus 54 ~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 128 (267)
T cd05066 54 SEASIMGQF----DHPNIIHLEGVVT-KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYV 128 (267)
T ss_pred HHHHHHHhC----CCCCcceEEEEEe-cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 555555544 2333344444443 23456899999999999887543333456666666555544 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 129 h~dlkp~nili~~~~~~~l~dfg~~~~ 155 (267)
T cd05066 129 HRDLAARNILVNSNLVCKVSDFGLSRV 155 (267)
T ss_pred ehhhchhcEEECCCCeEEeCCCCcccc
Confidence 999999999965 488999997643
No 349
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.63 E-value=2.1e-08 Score=99.75 Aligned_cols=55 Identities=27% Similarity=0.373 Sum_probs=48.8
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILS 690 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~ 690 (1578)
.+...++|++|||++++|.+|||++||++++++|||+++ ..+.|++|++||++|.
T Consensus 61 ~Ms~~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG---s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 61 PMSKSEAYKILNISPTASKERIREAHKQLMLRNHPDNGG---STYIASKVNEAKDLLL 115 (116)
T ss_pred CCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHh
Confidence 344569999999999999999999999999999999864 3678999999999985
No 350
>KOG0592|consensus
Probab=98.62 E-value=1.3e-07 Score=114.01 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=84.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH-HHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF-LNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf-~~E 486 (1578)
+-||-||+.+|++|+. .+|+++||||.-.. . |++|= -.+| .+|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~----------~-------------------Iike~------KvkYV~~E 123 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKR----------Y-------------------IIKEK------KVKYVTRE 123 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHH----------H-------------------HHhhc------ccchhhHH
Confidence 4599999999999995 48999999987311 0 00100 0111 233
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcC-CCHHH---HHHHHHHHHHHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKG-FSLAD---VDRKLFTAFAEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~---v~~~l~~~~l~~i~~~G 560 (1578)
-..+.++. ++|+|. +.|..+ ...-+.|+||.+++.|-++. ...| ++... -+..++.+ ++.||..|
T Consensus 124 k~~l~~L~----~hPgiv--kLy~TFQD~~sLYFvLe~A~nGdll~~i--~K~Gsfde~caR~YAAeIldA-leylH~~G 194 (604)
T KOG0592|consen 124 KEALTQLS----GHPGIV--KLYFTFQDEESLYFVLEYAPNGDLLDLI--KKYGSFDETCARFYAAEILDA-LEYLHSNG 194 (604)
T ss_pred HHHHHHhh----CCCCeE--EEEEEeecccceEEEEEecCCCcHHHHH--HHhCcchHHHHHHHHHHHHHH-HHHHHhcC
Confidence 33444443 444432 333222 23457999999999988764 3333 33211 22233332 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+||||+||.|||+. .+.+.|||.+-
T Consensus 195 IIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 195 IIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred ceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999954 69999999763
No 351
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.62 E-value=1.4e-07 Score=111.36 Aligned_cols=133 Identities=16% Similarity=0.129 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .-.+.+|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK-------------------------------------KELIINEI 67 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccch-------------------------------------HHHHHHHH
Confidence 5799999999999996 489999999764321100 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+...+ ......++||||++|.++.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~d 140 (297)
T cd06656 68 LVMREN----KNPNIVNYLDSY-LVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALDFLHSNQVIHRD 140 (297)
T ss_pred HHHHhC----CCCCEeeEEEEE-ecCCEEEEeecccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444332 222222222222 2345678999999999998863 344566666666555554 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 141 L~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 141 IKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred CCHHHEEECCCCCEEECcCccce
Confidence 999999965 58999999653
No 352
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.62 E-value=1.6e-07 Score=107.24 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|+||+|+.. +|+.||||........ +... -++..|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~~~------~~~~~e~ 50 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----------------------------EEAL------KSIMQEI 50 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----------------------------HHHH------HHHHHHH
Confidence 68999999999999865 7899999988643211 0000 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+..... .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~d 124 (254)
T cd06627 51 DLLKNLK----HPNIVKYIGSIE-TSDSLYIILEYAENGSLRQIIK-KFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRD 124 (254)
T ss_pred HHHHhCC----CCCccEEEEEEE-eCCEEEEEEecCCCCcHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 5555543 222222222222 2345689999999999987643 224566666655555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .+++.|||....+
T Consensus 125 l~p~ni~i~~~~~~~l~d~~~~~~~ 149 (254)
T cd06627 125 IKAANILTTKDGVVKLADFGVATKL 149 (254)
T ss_pred CCHHHEEECCCCCEEEeccccceec
Confidence 999999965 4899999976443
No 353
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=98.62 E-value=1.6e-07 Score=109.47 Aligned_cols=137 Identities=18% Similarity=0.169 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|...+ +..||+|........ ..+.+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~------------------------------------~~~~~ 55 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE------------------------------------QDESD 55 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH------------------------------------HHHHH
Confidence 579999999999999753 578899976432211 12335
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
|.+|...+.++. +..-+.+-... .-....+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 56 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 130 (277)
T cd05036 56 FLMEALIMSKFN----HQNIVRLIGVS-FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCK 130 (277)
T ss_pred HHHHHHHHHhCC----CCCEeeEEEEE-ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 566666665543 22222222222 22345689999999999988643211 1355556656555555 68
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.||++. .++++|||....
T Consensus 131 ~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 131 YLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred HHHHCCEeecccchheEEEeccCCCcceEeccCccccc
Confidence 89999999999999999974 278899997643
No 354
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.62 E-value=1.8e-07 Score=109.93 Aligned_cols=138 Identities=20% Similarity=0.142 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++.-... ....-.+.+|+
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~~~~~~~e~ 52 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----------------------------------LKQVEHVLNEK 52 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----------------------------------hhHHHHHHHHH
Confidence 67999999999999965 79999999886421100 00112245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+.+ ....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~d 126 (290)
T cd05580 53 RILQSIR----HPFLVNLYGSFQD-DSNLYLVMEYVPGGELFSHLR-KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRD 126 (290)
T ss_pred HHHHhCC----CCCccceeeEEEc-CCeEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 6665553 2222334343322 345689999999999987643 224566666655555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 127 l~p~nili~~~~~~kl~dfg~~~~ 150 (290)
T cd05580 127 LKPENLLLDSDGYIKITDFGFAKR 150 (290)
T ss_pred CCHHHEEECCCCCEEEeeCCCccc
Confidence 999999965 589999997543
No 355
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.62 E-value=2e-07 Score=109.34 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|++|++|.||+|+.. +|+.||||+..+.-.. .-++..|.
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--------------------------------------~~~~~~e~ 69 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV--------------------------------------DEEIEAEY 69 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccccH--------------------------------------HHHHHHHH
Confidence 57999999999999974 7999999987542100 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. .+..-+.+...+... ....+|||||++|.+|.++... ....++...+...+.+++ ++.+|.
T Consensus 70 ~~l~~l~---~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 146 (291)
T cd06639 70 NILQSLP---NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146 (291)
T ss_pred HHHHHhc---CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4444442 122223333332211 2356899999999999876431 123355555555555544 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|+||++. .++++|||....+
T Consensus 147 ~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 147 NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 9999999999999965 4899999976443
No 356
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.61 E-value=8.3e-08 Score=116.71 Aligned_cols=128 Identities=13% Similarity=0.077 Sum_probs=85.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +++.||+|+...+.. ..|+
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~-------------------------------------------~~E~ 108 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT-------------------------------------------LIEA 108 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-------------------------------------------HHHH
Confidence 68999999999999975 688999998543211 1233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+...+.+...+. .....++|||++.| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 109 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrD 182 (357)
T PHA03209 109 MLLQNV----NHPSVIRMKDTLV-SGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRD 182 (357)
T ss_pred HHHHhC----CCCCCcChhheEE-eCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333333 2222233322222 12346799999976 44444322234566666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 183 lkp~Nill~~~~~~kl~DfG~a~ 205 (357)
T PHA03209 183 VKTENIFINDVDQVCIGDLGAAQ 205 (357)
T ss_pred CCHHHEEECCCCCEEEecCcccc
Confidence 999999965 58999999763
No 357
>cd02996 PDI_a_ERp44 PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. The CXFS motif in the N-terminal domain allows ERp44 to form stable reversible mixed disulfides with its substrates. Through this activity, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. It also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol.
Probab=98.61 E-value=1.1e-08 Score=102.34 Aligned_cols=77 Identities=22% Similarity=0.356 Sum_probs=54.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-----Cc--ceeeeeec-ccCccccccCCcc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GV--GFFTVHYD-LFGTTDGFSGQDS 820 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-----~v--g~v~~~~~-~~~~~~~i~g~~~ 820 (1578)
.++..||+..+ +++++++|.||||||++|+++.|.|+++|+.+++. .+ +.++|..+ .+|+..++.++
T Consensus 5 ~l~~~~f~~~i---~~~~~vlv~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~-- 79 (108)
T cd02996 5 SLTSGNIDDIL---QSAELVLVNFYADWCRFSQMLHPIFEEAAAKIKEEFPDAGKVVWGKVDCDKESDIADRYRINKY-- 79 (108)
T ss_pred EcCHhhHHHHH---hcCCEEEEEEECCCCHHHHhhHHHHHHHHHHHhhccCCCCcEEEEEEECCCCHHHHHhCCCCcC--
Confidence 45667888765 34678999999999999999999999999988642 12 33333221 14444455444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|+.|.
T Consensus 80 -----------Ptl~~~~~g~ 89 (108)
T cd02996 80 -----------PTLKLFRNGM 89 (108)
T ss_pred -----------CEEEEEeCCc
Confidence 9998888764
No 358
>cd02994 PDI_a_TMX PDIa family, TMX subfamily; composed of proteins similar to the TRX-related human transmembrane protein, TMX. TMX is a type I integral membrane protein; the N-terminal redox active TRX domain is present in the endoplasmic reticulum (ER) lumen while the C-terminus is oriented towards the cytoplasm. It is expressed in many cell types and its active site motif (CPAC) is unique. In vitro, TMX reduces interchain disulfides of insulin and renatures inactive RNase containing incorrect disulfide bonds. The C. elegans homolog, DPY-11, is expressed only in the hypodermis and resides in the cytoplasm. It is required for body and sensory organ morphogeneis. Another uncharacterized TRX-related transmembrane protein, human TMX4, is included in the alignment. The active site sequence of TMX4 is CPSC.
Probab=98.61 E-value=1.4e-08 Score=100.31 Aligned_cols=75 Identities=23% Similarity=0.345 Sum_probs=51.4
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|+..+ + +.|+|.||||||++|+++.|.|+++++.+++.++.+...+++. +|+.
T Consensus 4 ~~l~~~~f~~~~-~----~~~lv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~------------ 66 (101)
T cd02994 4 VELTDSNWTLVL-E----GEWMIEFYAPWCPACQQLQPEWEEFADWSDDLGINVAKVDVTQEPGLSGR------------ 66 (101)
T ss_pred EEcChhhHHHHh-C----CCEEEEEECCCCHHHHHHhHHHHHHHHhhccCCeEEEEEEccCCHhHHHH------------
Confidence 345677888755 2 2389999999999999999999999998875544333332221 2223
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
..+..+||+.++.+|
T Consensus 67 -~~i~~~Pt~~~~~~g 81 (101)
T cd02994 67 -FFVTALPTIYHAKDG 81 (101)
T ss_pred -cCCcccCEEEEeCCC
Confidence 334455888777655
No 359
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.61 E-value=1.7e-07 Score=109.89 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||+|+.+......- .... -.+.
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~---------------------------~~~~------~~~~ 52 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK---------------------------AKTT------EHTR 52 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc---------------------------chHH------HHHH
Confidence 5689999999999986 3799999999754311000 0000 1123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.|.+.+.++. +++. |+.++. +......|||||++|.++.+... ....++...+...+.+++ +..+|..|
T Consensus 53 ~e~~~l~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ 125 (290)
T cd05613 53 TERQVLEHIR----QSPF--LVTLHYAFQTDTKLHLILDYINGGELFTHLS-QRERFKEQEVQIYSGEIVLALEHLHKLG 125 (290)
T ss_pred HHHHHHHhcc----cCCC--hhceeeEeecCCeEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4444444443 2232 222222 12234569999999999987643 223456666555544444 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||++ .++++|||....
T Consensus 126 i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 126 IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999975 589999997644
No 360
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.61 E-value=1.4e-07 Score=119.42 Aligned_cols=136 Identities=15% Similarity=0.141 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-C-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|... + ++.||+|.....-.. ....++.|
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~-------------------------------------~~~~~~~E 115 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER-------------------------------------QAAYARSE 115 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH-------------------------------------HHHHHHHH
Confidence 67999999999999854 4 688999965221100 00123456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh--Hh-hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG--LL-EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~--l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
++.+.++. +...|.+-..+ ......+|||||++|.+|.+... +. ...++..++...+.++. +..+|..|+
T Consensus 116 ~~~l~~l~----Hpniv~~~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i 190 (478)
T PTZ00267 116 LHCLAACD----HFGIVKHFDDF-KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM 190 (478)
T ss_pred HHHHHhCC----CCCEeEEEEEE-EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 55555442 22222222222 22345789999999999987532 11 12355555555554544 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||++ .++++|||....
T Consensus 191 vHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 191 MHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 9999999999965 599999997643
No 361
>KOG4721|consensus
Probab=98.61 E-value=9e-08 Score=114.66 Aligned_cols=138 Identities=15% Similarity=0.118 Sum_probs=93.8
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
+.+-.|+++| .++ +=||||+-|-|++|+++ ++.||||-. ++.-+.|++-|
T Consensus 117 e~WeiPFe~I-sEL--eWlGSGaQGAVF~Grl~-netVAVKKV----~elkETdIKHL---------------------- 166 (904)
T KOG4721|consen 117 ELWEIPFEEI-SEL--EWLGSGAQGAVFLGRLH-NETVAVKKV----RELKETDIKHL---------------------- 166 (904)
T ss_pred hhccCCHHHh-hhh--hhhccCcccceeeeecc-CceehhHHH----hhhhhhhHHHH----------------------
Confidence 4445555554 222 56999999999999986 679999932 23333343333
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCce---EEEEeccCCCcCCchhhHhhcCCCHHHHHHHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTR---VLTTEFIDGVKISDKEGLLEKGFSLADVDRKLF 549 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~---VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~ 549 (1578)
+.+ ++...|.+-.| ||.- .|+|||+.-..|..+.. ..+.+.+..++....
T Consensus 167 ------------------RkL----kH~NII~FkGV----CtqsPcyCIiMEfCa~GqL~~VLk-a~~~itp~llv~Wsk 219 (904)
T KOG4721|consen 167 ------------------RKL----KHPNIITFKGV----CTQSPCYCIIMEFCAQGQLYEVLK-AGRPITPSLLVDWSK 219 (904)
T ss_pred ------------------Hhc----cCcceeeEeee----ecCCceeEEeeeccccccHHHHHh-ccCccCHHHHHHHHH
Confidence 222 22222333222 3332 59999999888888743 345677887777666
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+. +..+|.|.++|||+|.-|||++ .|++.|||....+
T Consensus 220 ~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 220 GIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL 262 (904)
T ss_pred HhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence 655 7889999999999999999986 4899999976443
No 362
>KOG0616|consensus
Probab=98.60 E-value=2.1e-07 Score=104.91 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=82.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.-||.||+|.||..+.+ +|.-.|+||+..+- +++ +.+.---.+|-
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-------------vVk---------------------lKQveH~~nEk 95 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-------------VVK---------------------LKQVEHTHNEK 95 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHH-------------HHH---------------------HHHHHHHhhHH
Confidence 58999999999999976 78999999874221 000 00001112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHH---HHHHHHHHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDR---KLFTAFAEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~---~l~~~~l~~i~~~G~v 562 (1578)
+-+.+.. +|. +-+.++.+ .+.-.|||||++|+.|-.+.. ....++.. .++ .-+-..++.||..+++
T Consensus 96 ~vL~~v~-----~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lr-k~~rF~e~-~arFYAAeivlAleylH~~~ii 166 (355)
T KOG0616|consen 96 RVLKAVS-----HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLR-KSGRFSEP-HARFYAAEIVLALEYLHSLDII 166 (355)
T ss_pred HHHhhcc-----Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHH-hcCCCCch-hHHHHHHHHHHHHHHHHhcCee
Confidence 3333322 111 11222111 234479999999999987643 11233322 222 1122348999999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||+||.|||+. .++++|||-+-+
T Consensus 167 YRDLKPENiLlD~~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 167 YRDLKPENLLLDQNGHIKITDFGFAKR 193 (355)
T ss_pred eccCChHHeeeccCCcEEEEeccceEE
Confidence 999999999965 489999996533
No 363
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=98.60 E-value=2.2e-07 Score=108.57 Aligned_cols=138 Identities=19% Similarity=0.172 Sum_probs=87.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.... .-++..|.
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--------------------------------------~~~~~~e~ 65 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--------------------------------------DEEIEAEY 65 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch--------------------------------------HHHHHHHH
Confidence 57999999999999865 7899999987542110 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC----CCCceEEEEeccCCCcCCchhhH--h-hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD----KSSTRVLTTEFIDGVKISDKEGL--L-EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~----~~t~~VLVME~i~G~~l~d~~~l--~-~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
..+.++. .+..-+.+...+.. -....+|||||++|.+|.++..- . ...++...+...+.++. +..+|.
T Consensus 66 ~~l~~l~---~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 142 (286)
T cd06638 66 NILKALS---DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142 (286)
T ss_pred HHHHHHh---cCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh
Confidence 4444443 12222333332211 12335899999999999876321 1 12344444444443333 678899
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|+||++. .++++|||....+
T Consensus 143 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred CCccccCCCHHhEEECCCCCEEEccCCceeec
Confidence 9999999999999965 4889999976443
No 364
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=98.60 E-value=2.1e-07 Score=107.32 Aligned_cols=138 Identities=17% Similarity=0.115 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||||+.++.-.. + . ...-++.+|.
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~------------------------~------~~~~~~~~ei 53 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM----D------------------------A------KARQDCLKEI 53 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeeccccc----c------------------------h------hhHHHHHHHH
Confidence 57999999999999976 8999999987531100 0 0 0011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.++++. +...+.+...+. ......++|||++|.+|.++..- . ...++...+...+.+++ +..+|..|++
T Consensus 54 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~ 128 (267)
T cd08224 54 DLLKQLD----HPNVIKYLASFI-ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIM 128 (267)
T ss_pred HHHHhCC----CCCeeeeeeeee-cCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444442 222222222222 22345799999999999876421 1 12345566666555555 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||+++ .++++|||...
T Consensus 129 h~dl~p~nil~~~~~~~~l~d~~~~~ 154 (267)
T cd08224 129 HRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred cCCcChhhEEECCCCcEEEeccceee
Confidence 999999999975 48899999753
No 365
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.60 E-value=1.8e-07 Score=109.33 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+. .+++.||||..++..... ..-+|
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~ 54 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQ------------------------------------QWGEF 54 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHH------------------------------------HHHHH
Confidence 5689999999999984 256899999875321110 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------------cCCCHHHHHHH
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------------KGFSLADVDRK 547 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------------~~~~~~~v~~~ 547 (1578)
.+|++.+++++ +..-+.+...+. .....+|||||++|.+|.++..... ..++...+...
T Consensus 55 ~~E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 129 (283)
T cd05090 55 QQEASLMAELH----HPNIVCLLGVVT-QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129 (283)
T ss_pred HHHHHHHhhCC----CCCeeeEEEEEe-cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHH
Confidence 55666555553 222233333222 2345689999999999987643211 12344444444
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+.++. +..+|..|++|+|++|.|||+. .+++.|||....+
T Consensus 130 ~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (283)
T cd05090 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREI 174 (283)
T ss_pred HHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccc
Confidence 44444 7889999999999999999965 4899999976543
No 366
>KOG1095|consensus
Probab=98.60 E-value=1.8e-07 Score=122.44 Aligned_cols=139 Identities=18% Similarity=0.175 Sum_probs=107.7
Q ss_pred cccccccceEEEEEEec--CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK--EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
++||.|.||.||+|... +|. .||||..++... ..++.|
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~------------------------------------~~~~~~ 741 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS------------------------------------EQEVSD 741 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC------------------------------------HHHHHH
Confidence 68999999999999976 454 488887765432 245678
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh------hcCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL------EKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~------~~~~~~~~v~~~l~~~~--l~ 554 (1578)
|.+||.+|..|. |..-|..=.|-.+ .+...|++||++|..|..+..-. ...++..++....+++. .+
T Consensus 742 Fl~Ea~~m~~f~----HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~ 816 (1025)
T KOG1095|consen 742 FLKEALLMSKFD----HPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMN 816 (1025)
T ss_pred HHHHHHHHhcCC----CcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhH
Confidence 999999998875 3333444444434 66788999999999998875533 45677888888888877 78
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchhhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLV 588 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~ 588 (1578)
.+...+|||||+-.-|.|+. .+++-|||++..|.
T Consensus 817 YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 817 YLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred HHHhCCCcCcchhhhheeecccCcEEEcccchhHhhh
Confidence 89999999999999999965 48999999986443
No 367
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=98.60 E-value=1.8e-07 Score=107.07 Aligned_cols=141 Identities=14% Similarity=0.061 Sum_probs=88.9
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|+||+|+.. +|+.|++|+....-..... .+..+ .+.+|
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------~~~~~------~~~~e 52 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTG--------------------------QEAVK------QLEQE 52 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccc--------------------------hHHHH------HHHHH
Confidence 367999999999999976 8999999987643211100 00011 12334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+-+.++ .+...+.+..... .....+++|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 53 ~~~l~~~----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 126 (258)
T cd06632 53 IALLSKL----QHPNIVQYLGTER-EEDNLYIFLELVPGGSLAKLLK-KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHR 126 (258)
T ss_pred HHHHHhc----CCCCchheeeeEe-cCCeEEEEEEecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 4333333 2222223332221 2245689999999999987643 122355555544444443 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .++++|||....
T Consensus 127 dl~~~ni~~~~~~~~kl~d~~~~~~ 151 (258)
T cd06632 127 DIKGANILVDTNGVVKLADFGMAKQ 151 (258)
T ss_pred CCCHHHEEECCCCCEEEccCcccee
Confidence 9999999964 589999996543
No 368
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=98.60 E-value=2e-07 Score=109.43 Aligned_cols=138 Identities=17% Similarity=0.063 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|..+ +|+.||||...+...... + .+-.+.+|.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~----------------------------~------~~~~~~~E~ 51 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------------------------K------GESMALNEK 51 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccch----------------------------H------HHHHHHHHH
Confidence 56899999999999865 799999998754321100 0 000123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...+.+...+. ......+||||++|.+|.+.... ...+++...+...+.+++ +..+|..|++|+
T Consensus 52 ~il~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~ 126 (285)
T cd05630 52 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYR 126 (285)
T ss_pred HHHHhCC----CCCeeeeeEEEe-cCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 5554442 222222322222 22446799999999999876432 223466666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 127 dikp~Nil~~~~~~~~l~Dfg~~~ 150 (285)
T cd05630 127 DLKPENILLDDHGHIRISDLGLAV 150 (285)
T ss_pred CCCHHHEEECCCCCEEEeecccee
Confidence 9999999965 58999999753
No 369
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.60 E-value=2.4e-07 Score=103.42 Aligned_cols=137 Identities=23% Similarity=0.215 Sum_probs=92.2
Q ss_pred cccccccceEEEEEEecC-CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|++|++|+||+|...+ |+.||||+.+..... ...-++.+|+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------------------------------~~~~~~~~e~ 48 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------------------------------------KQREEFLREI 48 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------------------------------------HHHHHHHHHH
Confidence 689999999999999875 899999998754321 0112345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+...+ .......++|||++|.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 49 ~~~~~~~----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 123 (225)
T smart00221 49 RILKKLK----HPNIVKLYGVF-EDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRD 123 (225)
T ss_pred HHHHhCC----CCChhhheeee-ecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 6665552 21112222221 223567899999999988876432211156555555555444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 124 i~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 124 LKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred CCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999965 588999996543
No 370
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.60 E-value=1.6e-07 Score=119.15 Aligned_cols=139 Identities=14% Similarity=0.105 Sum_probs=86.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... .+. ..+.+|.
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~--~~~---------------------------------~~~~~Ei 82 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE--ADK---------------------------------NRAQAEV 82 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH--HHH---------------------------------HHHHHHH
Confidence 6799999999999985 489999999875431100 000 0112333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-------CCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-------KSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-------~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..+..+ .+...+..-..+.. ....-.|||||++|.+|.+...-. ...++...+...+.+++ +..
T Consensus 83 ~~l~~~----~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 83 CCLLNC----DFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred HHHhcC----CCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 322221 11111111111100 001135999999999998764311 12355566666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.|||+. .++++|||....
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~ 192 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKM 192 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCee
Confidence 9999999999999999975 599999997643
No 371
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.59 E-value=1.5e-07 Score=109.95 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=87.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.+|.|++|+||+|+.. +|+.||+|+....-.. .-++..|.
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~e~ 63 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE--------------------------------------EEEIKLEI 63 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH--------------------------------------HHHHHHHH
Confidence 57999999999999974 7899999987422100 01123444
Q ss_pred HHHHHHHHhhCCCCCe-eecEEee-----CCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYV-YIPRILW-----DKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v-~vP~v~~-----~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +++.+ .+...+. ......+++|||+.|.++.++..... ..++...+...+.++. +..+|.
T Consensus 64 ~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 139 (282)
T cd06636 64 NMLKKYS----HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA 139 (282)
T ss_pred HHHHHhc----CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4444442 22222 2211111 11234579999999999988754322 2345444444444433 678899
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.||+++ .++++|||....+
T Consensus 140 ~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 140 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 171 (282)
T ss_pred CCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence 9999999999999976 5899999976543
No 372
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.59 E-value=1.8e-07 Score=112.90 Aligned_cols=49 Identities=18% Similarity=0.156 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 539 FSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 539 ~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++...+...+.++. +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 170 l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 170 LTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 44455555555555 7889999999999999999965 4899999987543
No 373
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=98.59 E-value=2.7e-07 Score=106.57 Aligned_cols=145 Identities=14% Similarity=0.069 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|... +|+.||||+........-. ..--.++. -++..|+
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~----------------------~~~~~~~~------~~~~~e~ 57 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASS----------------------KDRKRSML------DALAREI 57 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccch----------------------hHHHHHHH------HHHHHHH
Confidence 57899999999999864 7899999987543211000 00001111 1345555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+..... ......++|||++|.+|.++... ...++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~d 131 (267)
T cd06628 58 ALLKELQ----HENIVQYLGSSL-DADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRD 131 (267)
T ss_pred HHHHhcC----CCCeeeEEEEEE-eCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 5555553 322233333322 23456899999999998876431 23345444444444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 132 i~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 132 IKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred CCHHHEEEcCCCCEEecccCCCccc
Confidence 999999965 4899999976443
No 374
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=98.59 E-value=3.2e-07 Score=107.18 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|..|++|+........ .-+|.+|+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~~e~ 53 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE-------------------------------------LEDYMVEI 53 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH-------------------------------------HHHHHHHH
Confidence 56999999999999976 68889999874332110 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+..+ .+..-+.+...+. .....++||||++|..+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~l----~h~~ii~~~~~~~-~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~d 128 (282)
T cd06643 54 DILASC----DHPNIVKLLDAFY-YENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRD 128 (282)
T ss_pred HHHHHC----CCCCeeeEEEEEe-eCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecC
Confidence 444443 2222233333332 23456899999999998775332234566666666665555 6889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||...+
T Consensus 129 lkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 129 LKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred CCcccEEEccCCCEEEcccccccc
Confidence 999999965 599999997644
No 375
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.59 E-value=2.8e-07 Score=108.19 Aligned_cols=136 Identities=17% Similarity=0.168 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|..+ .+..||||+...... ...+.+
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------------------------------------~~~~~~ 55 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------------------------------------LRERIE 55 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------------------------------------HHHHHH
Confidence 67999999999999754 356899997642211 011223
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
+.+|...+.++. +..-+.+...+ ......+|||||++|.+|.+...-.. ...+...+...+.+++
T Consensus 56 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (288)
T cd05061 56 FLNEASVMKGFT----CHHVVRLLGVV-SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130 (288)
T ss_pred HHHHHHHHHhCC----CCCeeeEEEEE-cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHH
Confidence 455655555543 22222222232 22356799999999999998753211 1112334444444443
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~ 167 (288)
T cd05061 131 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 167 (288)
T ss_pred HHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccc
Confidence 6788999999999999999965 48899999754
No 376
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.59 E-value=2.5e-07 Score=107.12 Aligned_cols=139 Identities=15% Similarity=0.149 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEecC-CC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-GV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+..+ ++ .||||......... . .--+|..
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~--~---------------------------------~~~~~~~ 49 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR--S---------------------------------EMEDFLS 49 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH--H---------------------------------HHHHHHH
Confidence 468999999999999764 43 69999875432110 0 0013456
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--H
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~--l 553 (1578)
|++.+.++. +...+.+...... .....+++|||++|.++.+...... ..++...+...+.++. +
T Consensus 50 E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 125 (272)
T cd05075 50 EAVCMKEFD----HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGM 125 (272)
T ss_pred HHHHHHhCC----CCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHH
Confidence 666665553 2222333322211 1234689999999999877542211 2245555555555544 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+|..|++|+|++|.|||++ .++++|||....
T Consensus 126 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 126 EYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred HHHHHCCeeccccchhheEEcCCCCEEECCCCcccc
Confidence 889999999999999999975 489999997643
No 377
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.59 E-value=1.3e-07 Score=118.52 Aligned_cols=128 Identities=18% Similarity=0.156 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +|+.||||..... .+.+|+
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~-------------------------------------------~~~~E~ 211 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA-------------------------------------------SSVHEA 211 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc-------------------------------------------CHHHHH
Confidence 67999999999999975 6899999942100 113466
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...|.+-.... .....+||||++.| .+.+........++...+...+.++. +..+|..|++|+|
T Consensus 212 ~iL~~L~----HpnIv~l~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD 285 (461)
T PHA03211 212 RLLRRLS----HPAVLALLDVRV-VGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRD 285 (461)
T ss_pred HHHHHCC----CCCCCcEEEEEE-ECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECc
Confidence 5555543 322233333222 23456899999976 44443221223467777776666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 286 LKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 286 IKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred CCHHHEEECCCCCEEEcccCCce
Confidence 999999975 48999999763
No 378
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.59 E-value=2.1e-07 Score=108.77 Aligned_cols=132 Identities=15% Similarity=0.163 Sum_probs=86.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+. .+|+.||||+...+.... .+-.+.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~E~ 50 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE------------------------------------LQKQIMSEL 50 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChH------------------------------------HHHHHHHHH
Confidence 5799999999999985 489999999875432110 011244555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+...+. ......|||||++|..+.... .++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 120 (279)
T cd06619 51 EILYKCD----SPYIIGFYGAFF-VENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRD 120 (279)
T ss_pred HHHHhCC----CCCeeeEEEEEE-ECCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCC
Confidence 5554442 222222222222 224467999999999886432 233444444444443 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 121 lkp~Nill~~~~~~~l~dfg~~~~ 144 (279)
T cd06619 121 VKPSNMLVNTRGQVKLCDFGVSTQ 144 (279)
T ss_pred CCHHHEEECCCCCEEEeeCCccee
Confidence 999999965 599999997644
No 379
>KOG0201|consensus
Probab=98.59 E-value=1.9e-08 Score=118.60 Aligned_cols=146 Identities=18% Similarity=0.212 Sum_probs=92.0
Q ss_pred ChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
++...|..+ +-||.||+|.||||.. ++++.||+||..=+..+.-- ++
T Consensus 10 ~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deI--------------------------ed---- 57 (467)
T KOG0201|consen 10 DPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEI--------------------------ED---- 57 (467)
T ss_pred Ccccccccc--hhccccccceeeeeeeccccceEEEEEechhhcchhh--------------------------HH----
Confidence 456667777 6699999999999995 58999999998532221100 11
Q ss_pred HHHHHhHHHHH--HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC-CHHHHHHHHHHHH-
Q psy12972 477 LEQELDFLNEG--RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF-SLADVDRKLFTAF- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea--~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~-~~~~v~~~l~~~~- 552 (1578)
+.+|+-+..+- .|..+.. .-. + ..+.-.++|||+.|.++.++. +..++ +...++-.+.++.
T Consensus 58 iqqei~~Ls~~~~~~it~yy----------gsy-l--~g~~LwiiMey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~ 122 (467)
T KOG0201|consen 58 IQQEISVLSQCDSPNITEYY----------GSY-L--KGTKLWIIMEYCGGGSVLDLL--KSGNILDEFEIAVILREVLK 122 (467)
T ss_pred HHHHHHHHHhcCcchHHhhh----------hhe-e--ecccHHHHHHHhcCcchhhhh--ccCCCCccceeeeehHHHHH
Confidence 11222221111 1111111 000 1 123456899999999999874 33444 5555555444444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhhhhh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRLVLA 590 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l~l~ 590 (1578)
+..+|.++.+|+|+++.||++. .+++.|||-..++...
T Consensus 123 ~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 123 GLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 8899999999999999999954 5788888876665443
No 380
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.59 E-value=2.5e-07 Score=106.27 Aligned_cols=131 Identities=17% Similarity=0.115 Sum_probs=88.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|. .+|+.||||+.+..... -.|.+|..
T Consensus 12 ~~lg~g~~g~v~~~~-~~~~~~~iK~~~~~~~~---------------------------------------~~~~~e~~ 51 (254)
T cd05083 12 EIIGEGEFGAVLQGE-YTGQKVAVKNIKCDVTA---------------------------------------QAFLEETA 51 (254)
T ss_pred eeeccCCCCceEecc-cCCCceEEEeecCcchH---------------------------------------HHHHHHHH
Confidence 678999999999996 47889999986432110 02344544
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+..... ....+++|||++|.++.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~l~~~----~~~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~d 125 (254)
T cd05083 52 VMTKL----HHKNLVRLLGVIL--HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRD 125 (254)
T ss_pred HHHhC----CCCCcCeEEEEEc--CCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 44443 2333344444442 234689999999999988743222 2355555544444443 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||+++ .++++|||...
T Consensus 126 l~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 126 LAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred cCcceEEEcCCCcEEECCCccce
Confidence 999999965 58999999754
No 381
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.59 E-value=1.4e-07 Score=115.28 Aligned_cols=136 Identities=18% Similarity=0.180 Sum_probs=84.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... ... .-.+.+|+
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~------------------------------~~~~~~E~ 50 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-----LVS------------------------------CKRVFREL 50 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-----hHH------------------------------HHHHHHHH
Confidence 5799999999999996 48999999976421110 000 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+..++ +...+.+-.++..- ....++||||+.| .+.+.. .....++...+...+.+++ +..+|..|+
T Consensus 51 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~-~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 124 (372)
T cd07853 51 KMLCFFK----HDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKII-VSPQPLSSDHVKVFLYQILRGLKYLHSAGI 124 (372)
T ss_pred HHHHhCC----CCCcCCHhheecCCCccccceEEEEeecccc-CHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 5554443 22222222222111 1245799999975 443332 1233466666655555554 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 125 vH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 125 LHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred eCCCCChHHEEECCCCCEEecccccee
Confidence 9999999999975 58999999764
No 382
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=98.59 E-value=2.4e-07 Score=108.03 Aligned_cols=136 Identities=14% Similarity=0.138 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|.... ++.||||+.+....... .-+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~------------------------------------~~~ 54 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKV------------------------------------QQE 54 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHH------------------------------------HHH
Confidence 568999999999998642 26899998764321100 012
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRK 547 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~ 547 (1578)
|.+|.+.+.++. +...+.+-..+ .......++|||++|.+|.+...... ..++...+...
T Consensus 55 ~~~ei~~l~~l~----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 129 (283)
T cd05048 55 FRQEAELMSDLQ----HPNIVCLLGVC-TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI 129 (283)
T ss_pred HHHHHHHHHhcC----CcccceEEEEE-cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHH
Confidence 455666555543 22222222222 22345679999999999887643211 23455555555
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+.++. +..+|..|++|+|++|.||+++ .++++|||...
T Consensus 130 ~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~ 172 (283)
T cd05048 130 AIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSR 172 (283)
T ss_pred HHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCccee
Confidence 55544 6889999999999999999975 48899999764
No 383
>KOG0597|consensus
Probab=98.58 E-value=1.7e-07 Score=112.59 Aligned_cols=226 Identities=17% Similarity=0.201 Sum_probs=122.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||-||+|.||||+.+ +++-||+|+.-.- .+-+.|+..++...++.+.+- .
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~--gr~~k~l~~l~~ev~i~r~lk----H--------------------- 60 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKS--GRNEKELKNLRQEVRILRSLK----H--------------------- 60 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhc--CCchHHHHHHHHHHHHHHhcC----C---------------------
Confidence 45899999999999976 7899999987321 122344444444444333220 0
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.|.-.|.+-| |-+++-++|.||+.| .|..+.. .+..++.+.+-+...+.. +..+|.+++.|||
T Consensus 61 pniv~m~esf-------------Et~~~~~vVte~a~g-~L~~il~-~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd 125 (808)
T KOG0597|consen 61 PNIVEMLESF-------------ETSAHLWVVTEYAVG-DLFTILE-QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRD 125 (808)
T ss_pred cchhhHHHhh-------------cccceEEEEehhhhh-hHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 0111222211 123445799999999 6666532 223344333333333333 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhhhhhh----hcc-cCCCCCCCCCCccccCcccchhh-hHHHHHHhhhhhhhhcccc
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRLVLAT----TLR-EDGYPDSGEWNPLEESPRMNFNL-IMLWYTFLLNVLFINCAVS 636 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l~l~~----~~~-~~g~~D~G~~~~l~~~~r~~~~l-~~lw~~~~l~~~~~~~~~~ 636 (1578)
++|.|||+. .+++.|||.+..+..-+ +.. ..-|+-.-++... .+.. ..||- +++++......
T Consensus 126 ~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~------pyd~~sDlWs---lGcilYE~~~G 196 (808)
T KOG0597|consen 126 MKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQ------PYDHTSDLWS---LGCILYELYVG 196 (808)
T ss_pred CCcceeeecCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCC------CccchhhHHH---HHHHHHHHhcC
Confidence 999999965 58999999765433211 111 1113333333321 1111 24672 23333223333
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
+-||- -....+|++..|-|-.+ .+.+..-|..+-+.. +.+||.+|..+-
T Consensus 197 ~PPF~-------------a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gL-L~kdP~~RltW~ 246 (808)
T KOG0597|consen 197 QPPFY-------------ARSITQLVKSILKDPVKPPSTASSSFVNFLQGL-LIKDPAQRLTWT 246 (808)
T ss_pred CCCch-------------HHHHHHHHHHHhcCCCCCcccccHHHHHHHHHH-hhcChhhcccHH
Confidence 33331 22334555555555433 235666676665543 457888887654
No 384
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=98.58 E-value=1.7e-07 Score=108.35 Aligned_cols=137 Identities=21% Similarity=0.172 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|+.|+||+|..+ +|+.|++|+..+.... +-++..|.
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--------------------------------------~~~~~~e~ 53 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE--------------------------------------EEEIKEEY 53 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchh--------------------------------------HHHHHHHH
Confidence 78999999999999975 7899999998643210 11234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
..+.++.. +...+.+...+.+. .....|||||++|.+|.++.... ...++...+...+.+++ +..+|
T Consensus 54 ~~l~~~~~---h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH 130 (275)
T cd06608 54 NILRKYSN---HPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH 130 (275)
T ss_pred HHHHHhcC---CCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 55555421 22222332222211 12247999999999998875422 23456655555554444 67889
Q ss_pred HcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..|++|+|++|.||+++ .++++|||....
T Consensus 131 ~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~ 162 (275)
T cd06608 131 ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQ 162 (275)
T ss_pred cCCcccCCCCHHHEEEccCCeEEECCCcccee
Confidence 99999999999999975 489999997543
No 385
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.58 E-value=1.7e-07 Score=109.31 Aligned_cols=137 Identities=21% Similarity=0.196 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . .+-++..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~------~~~~~~~e~ 50 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------------------------G------IPNQALREI 50 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------------------------h------hhHHHHHHH
Confidence 56899999999999964 79999999875432100 0 011344555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..++++. +..-+.+...+. .....++||||+ |.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 124 (286)
T cd07832 51 KALQACQ----HPYVVKLLDVFP-HGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRD 124 (286)
T ss_pred HHHHhCC----CCCCcceeeEEe-cCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555543 222233333332 234568999999 9999876443334566666665555554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 125 l~p~ni~~~~~~~~~l~dfg~~~~ 148 (286)
T cd07832 125 LKPANLLISADGVLKIADFGLARL 148 (286)
T ss_pred cCHHHEEEcCCCcEEEeeeeeccc
Confidence 999999965 488999997543
No 386
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.58 E-value=1.2e-07 Score=112.41 Aligned_cols=138 Identities=20% Similarity=0.185 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||+|+.+...... . ....+.+|+
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--------------------~---------------~~~~~~~E~ 57 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--------------------G---------------IPISSLREI 57 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--------------------C---------------CcchhhHHH
Confidence 46899999999999975 79999999875432110 0 001223455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+...+.+..++.+-. ...+|||||++| .+.++.......++...+...+.+++ +..+|..|++|+
T Consensus 58 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~ 132 (309)
T cd07845 58 TLLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHR 132 (309)
T ss_pred HHHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 555444 3333445555553322 346899999976 55554332224456666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .++++|||....
T Consensus 133 dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 133 DLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred CCCHHHEEECCCCCEEECccceeee
Confidence 9999999965 589999997643
No 387
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.58 E-value=2.1e-07 Score=110.01 Aligned_cols=134 Identities=16% Similarity=0.137 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|+. .+|+.||||+........ .-.+.+|+
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-------------------------------------~~~~~~e~ 68 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-------------------------------------KELIINEI 68 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch-------------------------------------HHHHHHHH
Confidence 5699999999999985 479999999764321110 01134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+...+. .....+|||||++|.++.++. .....+..++...+.++. +..+|..|++|+|
T Consensus 69 ~~l~~~----~h~~v~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~d 141 (296)
T cd06654 69 LVMREN----KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (296)
T ss_pred HHHHhC----CCCCEeeEEEEEE-eCCEEEEeecccCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444433 2222222222222 234678999999999998863 334456666666555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 142 Lkp~Nill~~~~~~kl~dfg~~~~ 165 (296)
T cd06654 142 IKSDNILLGMDGSVKLTDFGFCAQ 165 (296)
T ss_pred CCHHHEEEcCCCCEEECccccchh
Confidence 999999975 489999997543
No 388
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.58 E-value=2.4e-07 Score=109.65 Aligned_cols=139 Identities=19% Similarity=0.181 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe--------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
++||.|++|.||+|+. .++..||+|+........ + .
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~---~---------------------------------~ 64 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 64 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH---H---------------------------------H
Confidence 7899999999999974 245689999886432211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++..|...+.++. .+..-+.+...+. ......|+|||++|.+|.++..... ..++...+.
T Consensus 65 ~~~~~E~~~l~~l~---~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (304)
T cd05101 65 SDLVSEMEMMKMIG---KHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLV 140 (304)
T ss_pred HHHHHHHHHHHhhc---cCCCchheeEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHH
Confidence 12344554454442 1222233333332 2244579999999999887643211 123444454
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
..+.+++ +..+|..|++|+|++|.||+++ .++++|||....+
T Consensus 141 ~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~ 187 (304)
T cd05101 141 SCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDV 187 (304)
T ss_pred HHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceec
Confidence 4444444 6889999999999999999975 4899999976543
No 389
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=98.58 E-value=2.4e-07 Score=107.15 Aligned_cols=136 Identities=18% Similarity=0.182 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+....... ..+.+|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------------~~~~~e~ 57 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF-------------------------------------AVVQQEI 57 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH-------------------------------------HHHHHHH
Confidence 56899999999999864 799999999865422110 0122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+..-+.+...+. .....+++|||++|..|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~~~~l----~h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 131 (267)
T cd06645 58 IMMKDC----KHSNIVAYFGSYL-RRDKLWICMEFCGGGSLQDIYH-VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRD 131 (267)
T ss_pred HHHHhC----CCCCeeeEEEEEE-eCCEEEEEEeccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333332 2222233333322 1234579999999999988643 233466666666655555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||....+
T Consensus 132 lkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 132 IKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred CCHHHEEECCCCCEEECcceeeeEc
Confidence 999999965 4899999976433
No 390
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=98.58 E-value=2.7e-07 Score=106.05 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|+.. +|+.||||+..+..... ..-++..|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~------------------------------------~~~~~~~e~ 50 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE------------------------------------FRKQLLREL 50 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchH------------------------------------HHHHHHHHH
Confidence 68999999999999976 69999999886543210 011245556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.+++ +..-+.+...+. ......|||||++|.+|.+.... ...++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~ 124 (264)
T cd06623 51 KTLRSCE----SPYVVKCYGAFY-KEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKRHIIHR 124 (264)
T ss_pred HHHHhcC----CCCeeeEEEEEc-cCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 6665554 222233333322 23556899999999999887432 24567666666665555 678999 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .++++|||....+
T Consensus 125 ~l~~~ni~~~~~~~~~l~df~~~~~~ 150 (264)
T cd06623 125 DIKPSNLLINSKGEVKIADFGISKVL 150 (264)
T ss_pred CCCHHHEEECCCCCEEEccCccceec
Confidence 9999999975 5899999976433
No 391
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=98.57 E-value=3.1e-07 Score=107.03 Aligned_cols=136 Identities=17% Similarity=0.160 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|+||+|+.. +++.||||+........ ...+
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~------------------------------------~~~~ 55 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR------------------------------------ERIE 55 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH------------------------------------HHHH
Confidence 56899999999999753 36789999864321100 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
|.+|+.-+.++ .+...+.+-..+ ...+..++||||++|.+|.++..-.. ...+...+...+.+++
T Consensus 56 ~~~e~~~l~~l----~~~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 130 (277)
T cd05062 56 FLNEASVMKEF----NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIAD 130 (277)
T ss_pred HHHHHHHHHhC----CCCCeeeEEEEE-cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHH
Confidence 44555444433 222223333332 23356789999999999987643111 1123344444444444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~ 167 (277)
T cd05062 131 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 167 (277)
T ss_pred HHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcc
Confidence 6789999999999999999976 48899999754
No 392
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=98.57 E-value=2.9e-07 Score=106.63 Aligned_cols=136 Identities=13% Similarity=-0.018 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +|+.||||......... .-++.+|+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~-------------------------------------~~~~~~e~ 56 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY-------------------------------------VQPLHEEI 56 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH-------------------------------------HHHHHHHH
Confidence 57999999999999955 78899999765432110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC--CHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF--SLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~--~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.+++ +..-+.+-... ......+++|||++|.+|.+...-..... +...+...+.++. +..+|..|++|
T Consensus 57 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h 131 (268)
T cd06624 57 ALHSYLK----HRNIVQYLGSD-SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131 (268)
T ss_pred HHHHhcC----CCCeeeeeeee-ccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6665543 22222222211 12244679999999999988643221223 4444444444444 67889999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
+|++|.||++. .+++.|||....
T Consensus 132 ~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 132 RDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred cCCCHHHEEEcCCCCeEEEecchhhee
Confidence 99999999974 589999997643
No 393
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.57 E-value=1.7e-07 Score=109.84 Aligned_cols=135 Identities=21% Similarity=0.231 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|+.|.||+|+.+ +|+.||||..+....... . ..+.+|.
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~---------------------~---------------~~~~~E~ 54 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA---------------------P---------------FTAIREA 54 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC---------------------c---------------hhHHHHH
Confidence 68999999999999976 789999998765332100 0 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+..++. .....++||||++| .+.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~d 128 (291)
T cd07844 55 SLLKDLK----HANIVTLHDIIH-TKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRD 128 (291)
T ss_pred HHHhhCC----CcceeeEEEEEe-cCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence 5555543 222233333332 22346899999987 66654322223466666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 129 l~p~nil~~~~~~~kl~dfg~~~ 151 (291)
T cd07844 129 LKPQNLLISERGELKLADFGLAR 151 (291)
T ss_pred CCHHHEEEcCCCCEEECcccccc
Confidence 999999965 48999999754
No 394
>KOG0588|consensus
Probab=98.57 E-value=1.6e-07 Score=115.30 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchh------hhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDL------RERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i------~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
+-||.||-|.|-.|+.. +|+.+||||..... ...|+.++.+|+
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMk------------------------------ 67 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMK------------------------------ 67 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHH------------------------------
Confidence 46899999999999964 89999999985331 112222222222
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+.|.+-+..-.| |+-.+.-+||.||++|+.|-|.. +...++...+.++-+.+++ +...|..
T Consensus 68 --------------Li~HpnVl~LydV-we~~~~lylvlEyv~gGELFdyl-v~kG~l~e~eaa~ff~QIi~gv~yCH~~ 131 (786)
T KOG0588|consen 68 --------------LIEHPNVLRLYDV-WENKQHLYLVLEYVPGGELFDYL-VRKGPLPEREAAHFFRQILDGVSYCHAF 131 (786)
T ss_pred --------------HhcCCCeeeeeee-eccCceEEEEEEecCCchhHHHH-HhhCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 1233333333333 34445668999999999998874 3556677778887777766 7788999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
+++|+|++|.|+|+. .+++-|||++
T Consensus 132 ~icHRDLKpENlLLd~~~nIKIADFGMA 159 (786)
T KOG0588|consen 132 NICHRDLKPENLLLDVKNNIKIADFGMA 159 (786)
T ss_pred cceeccCCchhhhhhcccCEeeecccee
Confidence 999999999999953 5999999986
No 395
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.57 E-value=2.3e-07 Score=108.70 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+. .+|+.||||+.+...... . ....-.+.
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---~------------------------------~~~~~~~~ 52 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---K------------------------------AKTAEHTR 52 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---h------------------------------hhHHHHHH
Confidence 5799999999999984 368899999876321100 0 00011234
Q ss_pred HHHHHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 485 NEGRNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+|.+.+.++. +++.+ .+...+ ......+|||||++|.++.+... ....++...+...+.++. +..+|..|+
T Consensus 53 ~E~~~l~~~~----~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~~ 126 (288)
T cd05583 53 TERQVLEAVR----RCPFLVTLHYAF-QTDTKLHLILDYVNGGELFTHLY-QREHFTESEVRVYIAEIVLALDHLHQLGI 126 (288)
T ss_pred HHHHHHHhcc----CCcchhhhheee-ecCCEEEEEEecCCCCcHHHHHh-hcCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 5555555543 22222 111122 22334579999999998876532 223455565555554444 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .++++|||...
T Consensus 127 ~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 127 IYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred eccCCCHHHeEECCCCCEEEEECcccc
Confidence 9999999999965 58999999753
No 396
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.57 E-value=3.1e-07 Score=104.59 Aligned_cols=139 Identities=19% Similarity=0.135 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++|+.|++|.||+|+.. +|+.|+||+........ . ..-.+..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~e~ 50 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSE-----------------------------E------ELEALEREI 50 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccch-----------------------------H------HHHHHHHHH
Confidence 68999999999999976 79999999986543210 0 001224444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++++. +..-+.+.....+.. ...+++|||++|.+|.++..- ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~ 125 (260)
T cd06606 51 RILSSLQ----HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKK-FGKLPEPVIRKYTRQILEGLAYLHSNGIVHR 125 (260)
T ss_pred HHHHHcC----CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 4555443 222222222322211 456899999999999887432 22566666666555555 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .++++|||....+
T Consensus 126 dl~p~ni~i~~~~~~~l~d~~~~~~~ 151 (260)
T cd06606 126 DIKGANILVDSDGVVKLADFGCAKRL 151 (260)
T ss_pred CCCHHHEEEcCCCCEEEcccccEEec
Confidence 9999999965 5899999975433
No 397
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=98.57 E-value=3.2e-07 Score=107.02 Aligned_cols=137 Identities=18% Similarity=0.092 Sum_probs=90.3
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|.||+|... +|+.||||+........ -..+-.+..|.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~~~~~~e~~~ 46 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK----------------------------------RKGEQMALNEKKI 46 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh----------------------------------hhhhHHHHHHHHH
Confidence 689999999999854 79999999876421110 0011233456666
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
+.+++ +..-+.+...+. .....+|||||++|.+|.+...-.. ..++...+...+.+++ +..+|..|++|+|+
T Consensus 47 l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di 121 (277)
T cd05577 47 LEKVS----SRFIVSLAYAFE-TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDL 121 (277)
T ss_pred HHhCC----CCCEeeeeeEEe-cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 65553 222233333332 2345689999999999987643211 2466555555544544 67899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.||++. .++++|||....
T Consensus 122 ~p~Nil~~~~~~~~l~dfg~~~~ 144 (277)
T cd05577 122 KPENVLLDDHGNVRISDLGLAVE 144 (277)
T ss_pred CHHHEEECCCCCEEEccCcchhh
Confidence 99999975 589999997643
No 398
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.57 E-value=2.6e-07 Score=106.62 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=94.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.++...... .+ ....-++.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~-~~------------------------------~~~~~~~~~e~ 54 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSS-EQ------------------------------EEVVEALRKEI 54 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCch-hH------------------------------HHHHHHHHHHH
Confidence 5689999999999985 5899999999764321100 00 00112346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-+.+...+. ......++|||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~~iv~~~~~~~-~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~ 128 (268)
T cd06630 55 RLMARLN----HPHIIRMLGATC-EDSHFNLFVEWMAGGSVSHLLS-KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRD 128 (268)
T ss_pred HHHHHcC----CCceehhhceec-cCCeEEEEEeccCCCcHHHHHH-HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 7776653 222233333322 2234579999999999988743 223456566555555555 6889999999999
Q ss_pred CCCCCCCCC----eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||...++
T Consensus 129 i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 129 VKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred CCHHHEEEcCCCCEEEEccccccccc
Confidence 999999963 4899999976544
No 399
>cd03002 PDI_a_MPD1_like PDI family, MPD1-like subfamily; composed of eukaryotic proteins similar to Saccharomyces cerevisiae MPD1 protein, which contains a single redox active TRX domain located at the N-terminus, and an ER retention signal at the C-terminus indicative of an ER-resident protein. MPD1 has been shown to suppress the maturation defect of carboxypeptidase Y caused by deletion of the yeast PDI1 gene. Other characterized members of this subfamily include the Aspergillus niger prpA protein and Giardia PDI-1. PrpA is non-essential to strain viability, however, its transcript level is induced by heterologous protein expression suggesting a possible role in oxidative protein folding during high protein production. Giardia PDI-1 has the ability to refold scrambled RNase and exhibits transglutaminase activity.
Probab=98.57 E-value=1.6e-08 Score=101.11 Aligned_cols=78 Identities=27% Similarity=0.344 Sum_probs=57.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec---ccCccccccCCcccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD---LFGTTDGFSGQDSASRN 824 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~---~~~~~~~i~g~~~~~~~ 824 (1578)
.++..+|+..+.+ ++++++|.||||||++|+++.|.|+++|+.+.+. .+..++|..+ .+|...++
T Consensus 4 ~l~~~~~~~~i~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~a~~~~~~~~~~~v~~~~~~~~~~~~~~~i--------- 72 (109)
T cd03002 4 ELTPKNFDKVVHN--TNYTTLVEFYAPWCGHCKNLKPEYAKAAKELDGLVQVAAVDCDEDKNKPLCGKYGV--------- 72 (109)
T ss_pred EcchhhHHHHHhc--CCCeEEEEEECCCCHHHHhhChHHHHHHHHhcCCceEEEEecCccccHHHHHHcCC---------
Confidence 4566788888753 5778999999999999999999999999999864 4455555432 13444444
Q ss_pred ccccccCcccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~~ 841 (1578)
..+|++.+|..+-
T Consensus 73 ----~~~Pt~~~~~~~~ 85 (109)
T cd03002 73 ----QGFPTLKVFRPPK 85 (109)
T ss_pred ----CcCCEEEEEeCCC
Confidence 3448988888663
No 400
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.57 E-value=1.8e-07 Score=115.21 Aligned_cols=127 Identities=10% Similarity=0.070 Sum_probs=85.7
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.... .+.+|+
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~-------------------------------------------~~~~E~ 134 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQRG-------------------------------------------GTATEA 134 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhhh-------------------------------------------hhHHHH
Confidence 6799999999999996 47999999953100 013455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-|.+-..+. .....++|||++.| .+.+... ...+++..++...+.+++ +..+|..|++|+|
T Consensus 135 ~il~~l~----HpnIv~~~~~~~-~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrD 207 (391)
T PHA03212 135 HILRAIN----HPSIIQLKGTFT-YNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAIQYLHENRIIHRD 207 (391)
T ss_pred HHHHhCC----CCCCCCEeEEEE-ECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5555543 333333333332 23456899999965 4433321 234566666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||+|||+. .++++|||...
T Consensus 208 iKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 208 IKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred CChHhEEEcCCCCEEEEeCCccc
Confidence 999999974 59999999763
No 401
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.57 E-value=2.5e-07 Score=107.91 Aligned_cols=134 Identities=16% Similarity=0.146 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... . .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------~--------------~~~~~~E~ 49 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG----------------------T--------------PSTAIREI 49 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEeccccccc----------------------c--------------hHHHHHHH
Confidence 67899999999999975 79999999886432110 0 00123466
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.++. + +. +++++.. .....+|||||++| .+.+...... ..++...+...+.+++ +..+|..|+
T Consensus 50 ~~l~~l~----h-~~--i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (284)
T cd07836 50 SLMKELK----H-EN--IVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV 121 (284)
T ss_pred HHHHhhc----C-CC--EeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 2 22 3333322 23456899999987 5555422111 2356666666665555 678999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .+++.|||....
T Consensus 122 ~h~dl~p~ni~~~~~~~~~l~d~g~~~~ 149 (284)
T cd07836 122 LHRDLKPQNLLINKRGELKLADFGLARA 149 (284)
T ss_pred eeCCCCHHHEEECCCCcEEEeecchhhh
Confidence 9999999999975 589999997643
No 402
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=98.57 E-value=3.7e-07 Score=108.22 Aligned_cols=135 Identities=19% Similarity=0.150 Sum_probs=86.5
Q ss_pred cccccccceEEEEEEec-CCCEE--EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV--AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V--AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.+ +|..+ |+|......... ..-++.+
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~ 56 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 56 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHH------------------------------------HHHHHHH
Confidence 67999999999999965 67655 555433211100 0112345
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKL 548 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l 548 (1578)
|...+.++. +++. |++++. ......+|+|||++|.+|.++..-.. ..++...+...+
T Consensus 57 Ei~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 57 ELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred HHHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 555555552 2232 233332 23345689999999999887643111 124555555555
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.++. ++.+|..|++|+|++|.|||++ .++++|||...
T Consensus 131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~ 172 (303)
T cd05088 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 172 (303)
T ss_pred HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCc
Confidence 5544 6788999999999999999975 48999999763
No 403
>PTZ00443 Thioredoxin domain-containing protein; Provisional
Probab=98.56 E-value=1.3e-08 Score=114.64 Aligned_cols=82 Identities=23% Similarity=0.356 Sum_probs=57.6
Q ss_pred ccccccccccccccCC--ccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCcccc
Q psy12972 747 KLSTTHWNFEKNYIPK--SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSAS 822 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~--~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~ 822 (1578)
...+++.||++.+..+ ..+++|+|+||||||+||++++|+|+++|+.+++. .++.++|.... +|+..
T Consensus 32 Vv~Lt~~nF~~~v~~~~~~~~~~vlV~FyApWC~~Ck~~~P~~e~la~~~~~~v~~~~VD~~~~~~l~~~~--------- 102 (224)
T PTZ00443 32 LVLLNDKNFEKLTQASTGATTGPWFVKFYAPWCSHCRKMAPAWERLAKALKGQVNVADLDATRALNLAKRF--------- 102 (224)
T ss_pred cEECCHHHHHHHHhhhcccCCCCEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEecCcccHHHHHHc---------
Confidence 4566778999877543 24689999999999999999999999999999864 33333332111 33333
Q ss_pred ccccccccCcccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~ 841 (1578)
.+..+||+.+|.+|.
T Consensus 103 ----~I~~~PTl~~f~~G~ 117 (224)
T PTZ00443 103 ----AIKGYPTLLLFDKGK 117 (224)
T ss_pred ----CCCcCCEEEEEECCE
Confidence 344559988887653
No 404
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.56 E-value=3.3e-07 Score=108.77 Aligned_cols=138 Identities=17% Similarity=0.154 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
++||.|++|.||+|+.. +++.||+|+..+..... + .
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~---------------------------------~ 67 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK---D---------------------------------L 67 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH---H---------------------------------H
Confidence 68999999999999742 34679999987653210 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++..|...+.++. .+..-+.+...+. .....+|||||++|.+|.++..... ..++...+.
T Consensus 68 ~~~~~e~~~l~~l~---~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 143 (307)
T cd05098 68 SDLISEMEMMKMIG---KHKNIINLLGACT-QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLV 143 (307)
T ss_pred HHHHHHHHHHHHhc---CCCCEeeEEEEEe-cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence 12344555555442 1222233333332 2345789999999999987743211 124555566
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+.+++ ++.+|..|++|+|++|.||+++ .++++|||....
T Consensus 144 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~ 189 (307)
T cd05098 144 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARD 189 (307)
T ss_pred HHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccc
Confidence 6555555 7889999999999999999965 489999997643
No 405
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=98.56 E-value=2e-07 Score=108.78 Aligned_cols=136 Identities=18% Similarity=0.154 Sum_probs=87.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 50 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----------------------------GV------PSTAIREI 50 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC-----------------------------Cc------hHHHHHHH
Confidence 57899999999999975 79999999875321110 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +..-+.+...+.+ ....++||||++| .+.+...... ..++...+...+.+++ +..+|..|++|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H 124 (285)
T cd07861 51 SLLKELQ----HPNIVCLQDVLMQ-ESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLH 124 (285)
T ss_pred HHHHhcC----CCCEeeeEEEEee-CCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 5555543 2222333333322 3456899999986 4544422111 3456666665555555 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .+++.|||...
T Consensus 125 ~dl~p~nil~~~~~~~~l~dfg~~~ 149 (285)
T cd07861 125 RDLKPQNLLIDNKGVIKLADFGLAR 149 (285)
T ss_pred cCCCHHHEEEcCCCcEEECccccee
Confidence 99999999964 58999999764
No 406
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.56 E-value=2.6e-07 Score=107.49 Aligned_cols=139 Identities=16% Similarity=0.073 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.... ..+-+|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------------------------------------~~~~~~ 53 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------------------------------------QHRSDF 53 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------------------------------------HHHHHH
Confidence 67899999999999864 4789999998654321 011234
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|.+.+.++. +..-+.+....... ....+|+|||++|.++.+...-....++...+...+.++. +..+|..|
T Consensus 54 ~~ei~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 129 (284)
T cd05038 54 EREIEILRTLD----HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129 (284)
T ss_pred HHHHHHHHhCC----CCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55555444432 22112222222111 1245899999999999887432222366666666555554 67899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+|++|.||++. .+++.|||....+
T Consensus 130 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 130 YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999964 4888999876443
No 407
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.56 E-value=4.1e-07 Score=104.47 Aligned_cols=135 Identities=19% Similarity=0.148 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|... |+.||||+...... ..-.+..|..
T Consensus 12 ~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--------------------------------------~~~~~~~e~~ 52 (256)
T cd05039 12 ATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--------------------------------------AAQAFLAEAS 52 (256)
T ss_pred eeeecCCCceEEEEEec-CcEEEEEEeccchh--------------------------------------HHHHHHHHHH
Confidence 67999999999999864 89999998753321 0011234444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+...+.+ .+...+||||++|.++.+...... ..++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~l~~l~----~~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~d 127 (256)
T cd05039 53 VMTTLR----HPNLVQLLGVVLQ-GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRD 127 (256)
T ss_pred HHHhcC----CcceeeeEEEEcC-CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchh
Confidence 444442 2222333333322 566789999999999988643221 1356666655555554 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .++++|||.....
T Consensus 128 i~p~Nili~~~~~~~l~d~g~~~~~ 152 (256)
T cd05039 128 LAARNVLVSEDLVAKVSDFGLAKEA 152 (256)
T ss_pred cccceEEEeCCCCEEEccccccccc
Confidence 999999965 4899999976543
No 408
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=98.56 E-value=3.6e-07 Score=106.97 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=97.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
..+.|... ++++.|++|+||+|... +|+.||+|+......
T Consensus 17 ~~~~~~~~--~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------------------------------------- 57 (286)
T cd06614 17 PRELYKNL--EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------------------------------------- 57 (286)
T ss_pred ccccchHh--HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-------------------------------------
Confidence 34445444 68999999999999976 799999999864321
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.+-.+..|.+.+.++. +...+.+...+. .....+++|||++|.+|.++.......++...+...+.+++ +..
T Consensus 58 -~~~~~~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~ 131 (286)
T cd06614 58 -NKELIINEILIMKDCK----HPNIVDYYDSYL-VGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEY 131 (286)
T ss_pred -hHHHHHHHHHHHHHCC----CCCeeEEEEEEE-ECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 0011233444443332 222233333332 23567899999999999987543222567666666665555 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|+|++|.||++. .++++|||....
T Consensus 132 lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~ 165 (286)
T cd06614 132 LHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQ 165 (286)
T ss_pred HHhCCeeeCCCChhhEEEcCCCCEEECccchhhh
Confidence 8999999999999999965 589999996543
No 409
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.56 E-value=4.1e-07 Score=104.76 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=88.0
Q ss_pred ccccccceEEEEEEe---cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVT---KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l---~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-||.|++|.||+|.. .+++.||||+........ . ..-++..|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------~----------~~~~~~~e 46 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP-------------------------A----------LKDELLRE 46 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH-------------------------H----------HHHHHHHH
Confidence 479999999999975 368899999875332110 0 00123444
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..-+.++ .+...+.+-.... ....+|||||++|.+|.++.. ....++...+...+.++. ++.+|..|++|+
T Consensus 47 ~~~l~~l----~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~ 119 (257)
T cd05116 47 ANVMQQL----DNPYIVRMIGICE--AESWMLVMELAELGPLNKFLQ-KNKHVTEKNITELVHQVSMGMKYLEETNFVHR 119 (257)
T ss_pred HHHHHhC----CCCCcceEEEEEc--CCCcEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeec
Confidence 4444443 2222222222221 234579999999999987643 223456666666555555 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.||++. .+++.|||....
T Consensus 120 dlkp~nill~~~~~~kl~Dfg~~~~ 144 (257)
T cd05116 120 DLAARNVLLVTQHYAKISDFGLSKA 144 (257)
T ss_pred ccchhhEEEcCCCeEEECCCccccc
Confidence 9999999965 488999997643
No 410
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.56 E-value=1.8e-07 Score=110.33 Aligned_cols=141 Identities=20% Similarity=0.189 Sum_probs=90.9
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+.+..+ ..||.|++|.||+|... +|+.||||+..-.....
T Consensus 21 ~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------ 62 (292)
T cd06658 21 REYLDSF--IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR------------------------------------ 62 (292)
T ss_pred HHHHhhh--hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHH------------------------------------
Confidence 3444554 56999999999999964 78999999763211100
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-.+.+|...+..+. +..-+.+...+. .....++||||++|..+.++. ....++...+...+.+++ +..+
T Consensus 63 -~~~~~~e~~~l~~l~----h~~ii~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~~~~qi~~~l~~L 134 (292)
T cd06658 63 -RELLFNEVVIMRDYH----HENVVDMYNSYL-VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYL 134 (292)
T ss_pred -HHHHHHHHHHHHhCC----CCcHHHHHHhee-cCCeEEEEEeCCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 001233333333321 111111111111 224568999999999998763 344566666666665555 7889
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|..|++|+|++|.||++. .++++|||....
T Consensus 135 H~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 135 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred HHCCEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 999999999999999975 599999997643
No 411
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.55 E-value=3.3e-07 Score=106.24 Aligned_cols=134 Identities=16% Similarity=0.105 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEecCC----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKEG----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+..++ ..||||+.+...... ..-.|.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------~~~~~~ 55 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPS------------------------------------VREKFL 55 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHH------------------------------------HHHHHH
Confidence 6799999999999997543 468999765433110 001234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+..++. .....++|||++|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 56 ~e~~~l~~~----~h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ 129 (270)
T cd05056 56 QEAYIMRQF----DHPHIVKLIGVIT--ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFV 129 (270)
T ss_pred HHHHHHHhC----CCCchhceeEEEc--CCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 555555554 2322333333332 2456799999999999887432223456555555444444 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|++|.||++. .++++|||..
T Consensus 130 H~dl~p~nili~~~~~~~l~d~g~~ 154 (270)
T cd05056 130 HRDIAARNVLVSSPDCVKLGDFGLS 154 (270)
T ss_pred ccccChheEEEecCCCeEEccCcee
Confidence 999999999975 4899999965
No 412
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.55 E-value=1.9e-07 Score=109.91 Aligned_cols=139 Identities=18% Similarity=0.164 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||||+.+......-. ++ .+-.+..|+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~--------------------------~~------~~~~~~~e~ 53 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK--------------------------DG------INFTALREI 53 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEecccccccc--------------------------ch------hhHHHHHHH
Confidence 46899999999999965 7999999988654321000 00 011224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+...+.+ ....++||||+ |..|.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~~~----h~~i~~~~~~~~~-~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~d 127 (298)
T cd07841 54 KLLQELK----HPNIIGLLDVFGH-KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRD 127 (298)
T ss_pred HHHhhcC----CCCChhhhheeec-CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecC
Confidence 5555543 2222333333332 34568999999 7787766321111367666666665555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 128 l~p~nill~~~~~~~l~dfg~~~ 150 (298)
T cd07841 128 LKPNNLLIASDGVLKLADFGLAR 150 (298)
T ss_pred CChhhEEEcCCCCEEEccceeee
Confidence 999999965 48889999764
No 413
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=98.55 E-value=2.4e-07 Score=113.54 Aligned_cols=48 Identities=19% Similarity=0.090 Sum_probs=36.5
Q ss_pred CCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 539 FSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 539 ~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++...+...+.++. +..+|..|++|+|++|.|||++ .+++.|||....
T Consensus 209 l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~ 261 (374)
T cd05106 209 LDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARD 261 (374)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeee
Confidence 34444555555544 7889999999999999999965 489999997643
No 414
>cd02992 PDI_a_QSOX PDIa family, Quiescin-sulfhydryl oxidase (QSOX) subfamily; QSOX is a eukaryotic protein containing an N-terminal redox active TRX domain, similar to that of PDI, and a small C-terminal flavin adenine dinucleotide (FAD)-binding domain homologous to the yeast ERV1p protein. QSOX oxidizes thiol groups to disulfides like PDI, however, unlike PDI, this oxidation is accompanied by the reduction of oxygen to hydrogen peroxide. QSOX is localized in high concentrations in cells with heavy secretory load and prefers peptides and proteins as substrates, not monothiols like glutathione. Inside the cell, QSOX is found in the endoplasmic reticulum and Golgi. The flow of reducing equivalents in a QSOX-catalyzed reaction goes from the dithiol substrate - dithiol of the QSOX TRX domain - dithiols of the QSOX ERV1p domain - FAD - oxygen.
Probab=98.55 E-value=2.1e-08 Score=101.64 Aligned_cols=79 Identities=20% Similarity=0.304 Sum_probs=56.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~~ 820 (1578)
..++..+|.+.+.. ++++++|.||||||++|+.+.|.|+++++.+++. .++.++|..+. +|+..++
T Consensus 4 ~~l~~~~f~~~i~~--~~~~vvV~f~a~wC~~C~~~~~~~~~la~~~~~~~~~v~~~~vd~~~~~~~~~~~~~~i----- 76 (114)
T cd02992 4 IVLDAASFNSALLG--SPSAWLVEFYASWCGHCRAFAPTWKKLARDLRKWRPVVRVAAVDCADEENVALCRDFGV----- 76 (114)
T ss_pred EECCHHhHHHHHhc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHHHhcCCceEEEEEeccchhhHHHHHhCCC-----
Confidence 35566788888754 4489999999999999999999999999999753 23344443221 3444444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
..+|++.+|+.+.
T Consensus 77 --------~~~Pt~~lf~~~~ 89 (114)
T cd02992 77 --------TGYPTLRYFPPFS 89 (114)
T ss_pred --------CCCCEEEEECCCC
Confidence 4449998988765
No 415
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.55 E-value=5.5e-07 Score=105.72 Aligned_cols=133 Identities=19% Similarity=0.150 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+..-..... .+ .+.+|+
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~-------------------------------~~------~~~~e~ 67 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR-------------------------------RE------LLFNEV 67 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhH-------------------------------HH------HHHHHH
Confidence 7999999999999995 479999999753110000 00 123343
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.-+.++ .+..-+.+...+ ......+++|||++|.+|.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~~----~h~~vv~~~~~~-~~~~~~~~v~e~~~~~~L~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 140 (285)
T cd06648 68 VIMRDY----QHPNIVEMYSSY-LVGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140 (285)
T ss_pred HHHHHc----CCCChheEEEEE-EcCCeEEEEEeccCCCCHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 333333 222223333322 2345678999999999998763 335566666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 141 l~p~Nil~~~~~~~~l~d~g~~~ 163 (285)
T cd06648 141 IKSDSILLTSDGRVKLSDFGFCA 163 (285)
T ss_pred CChhhEEEcCCCcEEEcccccch
Confidence 999999965 58999999654
No 416
>PHA02125 thioredoxin-like protein
Probab=98.55 E-value=1.2e-07 Score=88.63 Aligned_cols=69 Identities=22% Similarity=0.408 Sum_probs=54.1
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCC-CCCHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEP-SFSVQKMV 955 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G-~~s~~~L~ 955 (1578)
+|.||++||++|+.+.|.+++++ +.+++||++.+.+++++|+|.+ +||++ +|+......| ..+..+|.
T Consensus 2 iv~f~a~wC~~Ck~~~~~l~~~~-------~~~~~vd~~~~~~l~~~~~v~~-~PT~~---~g~~~~~~~G~~~~~~~l~ 70 (75)
T PHA02125 2 IYLFGAEWCANCKMVKPMLANVE-------YTYVDVDTDEGVELTAKHHIRS-LPTLV---NTSTLDRFTGVPRNVAELK 70 (75)
T ss_pred EEEEECCCCHhHHHHHHHHHHHh-------heEEeeeCCCCHHHHHHcCCce-eCeEE---CCEEEEEEeCCCCcHHHHH
Confidence 68999999999999999987653 4688999999999999999998 99987 5655444445 23434444
Q ss_pred H
Q psy12972 956 E 956 (1578)
Q Consensus 956 ~ 956 (1578)
+
T Consensus 71 ~ 71 (75)
T PHA02125 71 E 71 (75)
T ss_pred H
Confidence 3
No 417
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.55 E-value=1.6e-07 Score=109.63 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... +.. -.+.+|.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------------------------~~~------~~~~~e~ 51 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------------------------DVK------KTALREV 51 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------------------------cch------hHHHHHH
Confidence 57999999999999976 68999999875432100 000 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+..++.. ....++||||++|..+..+.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l~----~~~i~~~~~~~~~-~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 125 (288)
T cd07833 52 KVLRQLR----HENIVNLKEAFRR-KGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRD 125 (288)
T ss_pred HHHHhcC----CCCeeehhheEEE-CCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555543 2222333333322 244689999999866654422 234567766666665555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 126 l~~~ni~~~~~~~~kl~d~g~~~~~ 150 (288)
T cd07833 126 IKPENILVSESGVLKLCDFGFARAL 150 (288)
T ss_pred CCHHHeEECCCCCEEEEeeeccccc
Confidence 999999964 5889999975443
No 418
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.55 E-value=4.9e-07 Score=107.79 Aligned_cols=149 Identities=19% Similarity=0.189 Sum_probs=97.0
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
++..++++|..+. -||.|++|.||+|+.. +|+.||||+........-
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~------------------------------ 62 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTN------------------------------ 62 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCch------------------------------
Confidence 4567788887774 4999999999999964 789999998753211100
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
....++..|.+.+++++ +...+.+..++.+ ....+|||||+.| .+.+........++...+...+.+++
T Consensus 63 ----~~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~ 132 (313)
T cd06633 63 ----EKWQDIIKEVKFLQQLK----HPNTIEYKGCYLK-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQ 132 (313)
T ss_pred ----HHHHHHHHHHHHHHhCC----CCCCccEEEEEEe-CCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 00012344555555543 3333444444332 2456899999976 44444322233456666555554444
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 133 al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~ 169 (313)
T cd06633 133 GLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSAS 169 (313)
T ss_pred HHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCc
Confidence 6888999999999999999965 58999999753
No 419
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=98.55 E-value=3.4e-07 Score=105.75 Aligned_cols=138 Identities=17% Similarity=0.120 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+-... + ...+.+|.+|.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------~-----------~~~~~~~~~e~ 53 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM-----------------------D-----------AKARQDCVKEI 53 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC-----------------------C-----------HHHHHHHHHHH
Confidence 56899999999999965 8999999976431100 0 01123455566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+...+.+ .....++|||++|.++.++.... ...++...+...+.++. +..+|..|++
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 128 (267)
T cd08228 54 DLLKQLN----HPNVIKYLDSFIE-DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVM 128 (267)
T ss_pred HHHHhCC----CcceeeeeeeEEE-CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 5555543 2222222222221 23457999999999988764321 12245555555554444 6788999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||+++ .+.++|||...
T Consensus 129 H~dl~~~nil~~~~~~~~l~d~g~~~ 154 (267)
T cd08228 129 HRDIKPANVFITATGVVKLGDLGLGR 154 (267)
T ss_pred CCCCCHHHEEEcCCCCEEECccccce
Confidence 999999999976 48999999654
No 420
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.55 E-value=2.9e-07 Score=108.03 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=85.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... +..+.+|+
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~------------------------------------~~~~~~e~ 54 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGV------------------------------------PFTAIREA 54 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCC------------------------------------cHHHHHHH
Confidence 67999999999999864 799999998753321100 11224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+-.... .....++||||++| .+.+.............+...+.++. +..+|..|++|+|
T Consensus 55 ~~l~~l~----h~ni~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 128 (291)
T cd07870 55 SLLKGLK----HANIVLLHDIIH-TKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRD 128 (291)
T ss_pred HHHHhcC----CCCEeEEEEEEe-cCCeEEEEEecccC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554442 222233333322 23457899999975 44333221223345555554444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||+++ .++++|||...
T Consensus 129 lkp~Nil~~~~~~~~l~Dfg~~~ 151 (291)
T cd07870 129 LKPQNLLISYLGELKLADFGLAR 151 (291)
T ss_pred CChHHEEEcCCCcEEEecccccc
Confidence 999999965 58999999653
No 421
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=98.54 E-value=3.5e-07 Score=108.43 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=92.8
Q ss_pred CcccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQEL 481 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~El 481 (1578)
.+.||.|++|+||+|+.. ++..||||+.+....... .-
T Consensus 40 ~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~ 83 (302)
T cd05055 40 GKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSE------------------------------------RE 83 (302)
T ss_pred cceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHH------------------------------------HH
Confidence 368999999999999742 456899998764322100 01
Q ss_pred hHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 482 DFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 482 Df~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
++.+|.+.+.++. .+..-+.+...+ ......+|+|||+.|.+|.++..... ..++...+.....++. +..+|.
T Consensus 84 ~~~~E~~~l~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 159 (302)
T cd05055 84 ALMSELKIMSHLG---NHENIVNLLGAC-TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS 159 (302)
T ss_pred HHHHHHHHHHhcc---CCCCcceEEEEE-ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666652 122223333332 22345789999999999987643211 1256666666555554 678999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.|||++ .++++|||....+
T Consensus 160 ~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 160 KNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 9999999999999975 4788999976433
No 422
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.54 E-value=2.3e-07 Score=108.09 Aligned_cols=139 Identities=18% Similarity=0.212 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|+||+|+.. +|+.||||+.+...... ....++..|+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~-----------------------------------~~~~~~~~e~ 49 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE-----------------------------------GFPITAIREI 49 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc-----------------------------------cchHHHHHHH
Confidence 56899999999999966 68999999987543100 0012345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+..++.+- ....+|||||++| ++.++..-....++...+...+.++. +..+|..|++|+
T Consensus 50 ~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 50 KLLQKLR----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred HHHHhcc----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 6665553 22223333343322 2567899999986 55554321223566666555555544 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .+++.|||....+
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeec
Confidence 9999999976 5889999976433
No 423
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=98.54 E-value=5e-07 Score=103.71 Aligned_cols=136 Identities=16% Similarity=0.113 Sum_probs=88.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||+|+.+-..... . .-++..|+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~---~---------------------------------~~~~~~e~ 49 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS---A---------------------------------VEDSRKEA 49 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH---H---------------------------------HHHHHHHH
Confidence 67999999999999865 79999999874211100 0 01223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++ .+..-+.+...+ +.....+++|||++|.++.+.... ....++...+...+.++. +..+|..|++|+
T Consensus 50 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 124 (255)
T cd08219 50 VLLAKM----KHPNIVAFKESF-EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHR 124 (255)
T ss_pred HHHHhC----CCCCcceEEEEE-EECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccC
Confidence 444433 232223333333 233456899999999988775432 122355555555555544 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 125 dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 125 DIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred CCCcceEEECCCCcEEEcccCcce
Confidence 9999999975 48899999764
No 424
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.54 E-value=4.4e-07 Score=105.16 Aligned_cols=135 Identities=17% Similarity=0.043 Sum_probs=83.7
Q ss_pred ccccccceEEEEEEecC---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 410 PIAAASLAQVFRAVTKE---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
-||.|++|+||+|...+ ...||||..+...... .+..|.+|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~e 45 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD------------------------------------EQLLFLQE 45 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChH------------------------------------HHHHHHHH
Confidence 38999999999998654 3578888654322110 11234555
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc----CCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK----GFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~----~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
++.+..+ .+..-+.+-... ......+|||||++|.+|.++..-... ..+...+...+.++. +..+|..|
T Consensus 46 ~~~~~~l----~h~nii~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 120 (269)
T cd05042 46 VQPYREL----NHPNVLQCLGQC-IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120 (269)
T ss_pred HHHHHhC----CCCCcceEEEEE-CCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 5544433 222222222222 123456899999999999886432111 112233333333333 67899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||.||++. .++++|||...
T Consensus 121 ivH~dlkp~Nill~~~~~~kl~dfg~~~ 148 (269)
T cd05042 121 FIHSDLALRNCQLTADLSVKIGDYGLAL 148 (269)
T ss_pred EecccccHhheEecCCCcEEEecccccc
Confidence 99999999999965 58999999753
No 425
>PHA02988 hypothetical protein; Provisional
Probab=98.54 E-value=4.4e-07 Score=106.67 Aligned_cols=142 Identities=14% Similarity=0.042 Sum_probs=93.9
Q ss_pred cccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 404 RSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 404 ~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
...+...++.|+.+.||+|.. +|+.||||+.+...... ..++ -+|
T Consensus 21 ~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~------------------------~~~~----------~~~ 65 (283)
T PHA02988 21 DKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGH------------------------KVLI----------DIT 65 (283)
T ss_pred CCCCCeEEeeCCceEEEEEEE-CCEEEEEEecccccccc------------------------HHHH----------HHH
Confidence 344456899999999999987 79999999876431110 0000 124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
.+|++.+.+++ +..-+.+-..+.+ -....+|||||++|.+|.++.. ....++.......+.++. +..+|.
T Consensus 66 ~~E~~~l~~l~----h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~-~~~~~~~~~~~~i~~~i~~~l~~lH~ 140 (283)
T PHA02988 66 ENEIKNLRRID----SNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLD-KEKDLSFKTKLDMAIDCCKGLYNLYK 140 (283)
T ss_pred HHHHHHHHhcC----CCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHh-hCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 66777777764 2222222222222 1234579999999999988743 223455555555555544 667887
Q ss_pred -cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 -TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 -~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|.+|+|++|.||++. .++++|||...
T Consensus 141 ~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~ 171 (283)
T PHA02988 141 YTNKPYKNLTSVSFLVTENYKLKIICHGLEK 171 (283)
T ss_pred cCCCCCCcCChhhEEECCCCcEEEcccchHh
Confidence 5999999999999965 58999999764
No 426
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.53 E-value=2.6e-07 Score=111.60 Aligned_cols=135 Identities=16% Similarity=0.187 Sum_probs=85.6
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.++||.|++|.||+|+.. +|+.||||+.+...... .+. .++..|
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~e 64 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-----------------------------IFA------KRAYRE 64 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------------------------cch------hHHHHH
Confidence 479999999999999964 79999999875321100 000 012334
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.+.+.++. +..-+.+..++.. .....++||||+.+ .+.+ .....++...+...+.+++ +..+|..
T Consensus 65 ~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 136 (342)
T cd07879 65 LTLLKHMQ----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQK---IMGHPLSEDKVQYLVYQMLCGLKYIHSA 136 (342)
T ss_pred HHHHHhcC----CCCccchhheecccccCCCCceEEEEeccccc-CHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 43333332 2222223332221 11345799999964 3332 2334566666666655555 7789999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .++++|||...
T Consensus 137 ~i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 137 GIIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 999999999999965 58999999754
No 427
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=98.53 E-value=3.4e-07 Score=105.03 Aligned_cols=133 Identities=17% Similarity=0.135 Sum_probs=86.2
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||+|++|+||+|+.. +|+.||+|+........ .... -.+.+|.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~----------------------------~~~~------~~~~~e~~~ 46 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----------------------------KNQV------DQVLTERDI 46 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh----------------------------hhHH------HHHHHHHHH
Confidence 588999999999986 59999999875432110 0000 112333333
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+++ +.. +++++... ....+++|||++|.+|.++..- ...++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~~~----h~~---i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~d 118 (265)
T cd05579 47 LSQAQ----SPY---VVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN-VGSLDEDVARIYIAEIVLALEYLHSNGIIHRD 118 (265)
T ss_pred HHhCC----Ccc---hhHHHHheecCcEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCC
Confidence 33332 111 22222222 2345799999999999876432 13456666655555555 6789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 119 i~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 119 LKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred CCHHHeEEcCCCCEEEEecccch
Confidence 999999965 58999999754
No 428
>KOG1989|consensus
Probab=98.53 E-value=2e-07 Score=118.68 Aligned_cols=136 Identities=19% Similarity=0.249 Sum_probs=92.5
Q ss_pred CcccccccceEEEEEEecCC-CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEG-VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G-~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
++-||.|+||+||.|....| .++|+|-+.-. .+ .++.. +.+|+|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de---~~L~~---------------------------v~~EI~---- 86 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DE---EALNA---------------------------VKREID---- 86 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecC-CH---HHHHH---------------------------HHHHHH----
Confidence 36899999999999998765 99999976533 11 11111 222333
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee-CC---CCce-----EEEEeccCCCcCCchhh-HhhcCCCHHHHHHHHHHHH--HH
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW-DK---SSTR-----VLTTEFIDGVKISDKEG-LLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~-~~---~t~~-----VLVME~i~G~~l~d~~~-l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-|+.+ ++++.|. ..+. .. .+.+ .|-||||.|..|-|+.. ....+++..+|.+++.+++ +.
T Consensus 87 --~MK~L----~gh~nIV--~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa 158 (738)
T KOG1989|consen 87 --IMKLL----SGHKNIV--SYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVA 158 (738)
T ss_pred --HHHHh----cCCCcee--eEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHH
Confidence 33333 3333221 1111 00 1111 48899999999988754 2345688999999888877 77
Q ss_pred HHHHcC--ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 555 QIFQTG--FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G--~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.||... ++|||||-.|||+. ..+|+|||.+..
T Consensus 159 ~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 159 AMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred HHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 889888 99999999999965 599999997643
No 429
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=98.53 E-value=5.8e-07 Score=103.31 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|... +++.||+|+........ . -.+..|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----~---------------------------------~~~~~e~ 51 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD----F---------------------------------EIIQQEI 51 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh----H---------------------------------HHHHHHH
Confidence 67999999999999965 68899999986432110 0 0123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +..-+.+...+. ....-+|+|||++|..|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~~~----h~~i~~~~~~~~-~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~d 126 (262)
T cd06613 52 SMLKECR----HPNIVAYFGSYL-RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRD 126 (262)
T ss_pred HHHHhCC----CCChhceEEEEE-eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Confidence 4444432 222233322221 23445799999999999887543335677777666666555 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .+++.|||....+
T Consensus 127 l~p~ni~i~~~~~~~l~d~g~~~~~ 151 (262)
T cd06613 127 IKGANILLTEDGDVKLADFGVSAQL 151 (262)
T ss_pred CChhhEEECCCCCEEECccccchhh
Confidence 999999965 5899999976544
No 430
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=98.53 E-value=3.3e-07 Score=108.07 Aligned_cols=137 Identities=18% Similarity=0.138 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-----------------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-----------------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----------------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||.|++|.||+|..+ ++..||||+.+......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~----------------------------- 61 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN----------------------------- 61 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH-----------------------------
Confidence 57999999999998532 34579999886542211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------cCCCH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------KGFSL 541 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------~~~~~ 541 (1578)
..-+|.+|++.+.++. +...+.+-..+ ......+++|||++|.+|.++..... ..++.
T Consensus 62 -------~~~~~~~E~~~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (296)
T cd05095 62 -------ARNDFLKEIKIMSRLK----DPNIIRLLAVC-ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISY 129 (296)
T ss_pred -------HHHHHHHHHHHHHhCC----CCCcceEEEEE-ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCH
Confidence 0124556666655543 22222222222 12345689999999999987643211 11333
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+...+.++. +..+|..|++|+|++|.||++. .++++|||....
T Consensus 130 ~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05095 130 STLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCccccc
Confidence 44555444444 7889999999999999999975 489999997644
No 431
>KOG0910|consensus
Probab=98.53 E-value=2.4e-08 Score=103.10 Aligned_cols=78 Identities=24% Similarity=0.420 Sum_probs=57.4
Q ss_pred cccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccC
Q psy12972 752 HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 752 ~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
...|+..|.+ ++.|++|+|||+|||+|+.|.|..+++++++++. +.+..++.| ...++..+ +.+.+.
T Consensus 50 ~~~~~~~Vi~--S~~PVlVdF~A~WCgPCk~l~P~l~~~~~~~~g~-~k~~kvdtD--------~~~ela~~--Y~I~av 116 (150)
T KOG0910|consen 50 DSEFDDKVIN--SDVPVLVDFHAEWCGPCKMLGPILEELVSEYAGK-FKLYKVDTD--------EHPELAED--YEISAV 116 (150)
T ss_pred HHHHHHHHHc--cCCCEEEEEecCcCccHhHhhHHHHHHHHhhcCe-EEEEEEccc--------cccchHhh--cceeee
Confidence 3478888864 8999999999999999999999999999999654 233333322 23333332 556667
Q ss_pred ccccccccccc
Q psy12972 832 PFDDVFSEGFN 842 (1578)
Q Consensus 832 Ptiklf~~~~~ 842 (1578)
||+.+|++|-.
T Consensus 117 PtvlvfknGe~ 127 (150)
T KOG0910|consen 117 PTVLVFKNGEK 127 (150)
T ss_pred eEEEEEECCEE
Confidence 99999987753
No 432
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=98.53 E-value=6.3e-07 Score=104.08 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=87.5
Q ss_pred cccccccceEEEEEEec-CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+++ +|+ .||+|+........ ..-++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------~~~~~~~ 44 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 44 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHH------------------------------------HHHHHHH
Confidence 36899999999999975 455 46777665322110 0113456
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLF 549 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~ 549 (1578)
|.+.+.++. +++. +.+-.... .....+|||||++|.+|.++..-.. ..++...+...+.
T Consensus 45 E~~~l~~l~----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 119 (270)
T cd05047 45 ELEVLCKLG----HHPNIINLLGACE-HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 119 (270)
T ss_pred HHHHHHhhc----cCCCeeeEEEEEe-cCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHH
Confidence 666666553 2332 22222222 2344689999999999887642110 1244555555555
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
++. ++.+|..|++|+|++|.||++. .++++|||..
T Consensus 120 ~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 120 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred HHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 554 6889999999999999999975 4889999975
No 433
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=98.52 E-value=4.7e-07 Score=107.37 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=93.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+++.|... +-||.|++|.||+|+.. +|+.||+|+........ .
T Consensus 12 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----------------------------~----- 56 (307)
T cd06607 12 DPEKLFTDL--REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----------------------------N----- 56 (307)
T ss_pred Ccchhhhhh--eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----------------------------H-----
Confidence 345555554 56999999999999975 79999999874221100 0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
...-++.+|...+.++ .+...+.+...+.+ ....+|||||++|. +.+........++...+...+.++. +.
T Consensus 57 -~~~~~~~~Ei~~l~~l----~h~niv~~~~~~~~-~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~ 129 (307)
T cd06607 57 -EKWQDIIKEVRFLQQL----RHPNTIEYKGCYLR-EHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLA 129 (307)
T ss_pred -HHHHHHHHHHHHHHhC----CCCCEEEEEEEEEe-CCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHH
Confidence 0011234555544443 23333444444432 34568999999874 4343322234566666655554544 68
Q ss_pred HHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|+||++. .+++.|||...
T Consensus 130 ~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~ 163 (307)
T cd06607 130 YLHSHERIHRDIKAGNILLTEPGTVKLADFGSAS 163 (307)
T ss_pred HHHHCCceecCCCcccEEECCCCCEEEeecCcce
Confidence 89999999999999999965 58999999753
No 434
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.52 E-value=4.1e-07 Score=108.09 Aligned_cols=135 Identities=13% Similarity=0.093 Sum_probs=85.2
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+...||.|++|.||+|+.+ +++.||||+....-. ...+
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------------------------------~~~~ 45 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------------------------------SMSA 45 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------------------------------cHHH
Confidence 3457999999999999975 457899997653210 0012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHh--------hcCCCHHHHHHHHHHHH--
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLL--------EKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~--------~~~~~~~~v~~~l~~~~-- 552 (1578)
.+|++.+.++ .+...+.+..++.... ..-+|+|||++| .+.+..... ...++...+...+.+++
T Consensus 46 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a 120 (317)
T cd07867 46 CREIALLREL----KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG 120 (317)
T ss_pred HHHHHHHHhC----CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH
Confidence 3455555444 2333344545443322 334799999976 443332111 11244444444444544
Q ss_pred HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 121 L~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred HHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 778999999999999999996 258999999764
No 435
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=98.52 E-value=3.1e-07 Score=106.31 Aligned_cols=137 Identities=20% Similarity=0.165 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+-||.|++|.||+|+++ .+..|+||+..+..... ..-+|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~------------------------------------~~~~~ 48 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE------------------------------------EEEEF 48 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH------------------------------------HHHHH
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc------------------------------------cceee
Confidence 45899999999999987 36789999996643221 12245
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +..-+.+=.+.. ....-.+||||+++.+|.+...-. ...++...+...+.++. +..+|..|
T Consensus 49 ~~e~~~l~~l~----h~ni~~~~g~~~-~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ 123 (259)
T PF07714_consen 49 LNEIQILRKLR----HPNIVKLYGFCI-ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN 123 (259)
T ss_dssp HHHHHHHHTHS----BTTBE-EEEEEE-SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeccccccccc----cccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 56666666552 233333333333 334568999999999999875433 34677777777777666 77899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .+++.|||....
T Consensus 124 iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 124 IIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred ccccccccccccccccccccccccccccc
Confidence 99999999999964 589999997643
No 436
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=98.52 E-value=5.6e-08 Score=112.54 Aligned_cols=57 Identities=35% Similarity=0.592 Sum_probs=51.2
Q ss_pred ccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--------hhHHHHHHHHHHHHHHcCC
Q psy12972 635 VSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--------PTAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--------~~a~~~f~~i~~Ay~~L~d 691 (1578)
...|+|++|||++++|.++||++||+|+++||||+... +.++++|++|++||++|+.
T Consensus 198 ~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 198 TLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred cHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 34699999999999999999999999999999999632 3588999999999999975
No 437
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.52 E-value=2.3e-07 Score=109.40 Aligned_cols=138 Identities=20% Similarity=0.178 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... . .+.++.+|.
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--------------------~---------------~~~~~~~e~ 57 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--------------------G---------------FPITAIREI 57 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--------------------C---------------chHHHHHHH
Confidence 57899999999999976 69999999886542210 0 011234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+.+.+++ +...+.+...+.+. .+.-.|||||++| .+.+...-....++...+...+.+++ +..+
T Consensus 58 ~~~~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 132 (302)
T cd07864 58 KILRQLN----HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC 132 (302)
T ss_pred HHHHhCC----CCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5554442 22222222222111 1245799999988 44333211123466666666666655 6789
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|..|++|+|++|+||++. .+++.|||....
T Consensus 133 H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred HhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 999999999999999965 488999997643
No 438
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=98.52 E-value=6.5e-07 Score=103.10 Aligned_cols=138 Identities=19% Similarity=0.188 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|... +|+.||||+........ + .-++..|+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------------------~~~~~~e~ 50 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT---S---------------------------------VDELRKEV 50 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch---H---------------------------------HHHHHHHH
Confidence 67999999999999954 78999999874321110 0 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
..+.++. +...+.+...+ ......+++|||++|.++.+..... ...++...+...+.+++ +..+|..|++|
T Consensus 51 ~~l~~l~----~~~i~~~~~~~-~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h 125 (267)
T cd06610 51 QAMSQCN----HPNVVKYYTSF-VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIH 125 (267)
T ss_pred HHHHhcC----CCCEEEEEEEE-eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 5444432 22222222222 2234568999999999998874322 12456555555555554 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|++|.||+++ .++++|||....+
T Consensus 126 ~~l~p~ni~~~~~~~~~l~df~~~~~~ 152 (267)
T cd06610 126 RDIKAGNILLGEDGSVKIADFGVSASL 152 (267)
T ss_pred CCCCHHhEEEcCCCCEEEcccchHHHh
Confidence 99999999965 5899999976443
No 439
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.52 E-value=1.2e-06 Score=104.42 Aligned_cols=138 Identities=18% Similarity=0.174 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. ++..||+|+.+...... . .
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---~---------------------------------~ 61 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK---D---------------------------------L 61 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH---H---------------------------------H
Confidence 68999999999999742 35679999876432210 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~ 545 (1578)
-++..|.+-+.++. .+...+.+...+. .....+|+|||++|.+|.++.... ...++...+.
T Consensus 62 ~~~~~E~~~l~~l~---~h~~iv~~~~~~~-~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 137 (314)
T cd05099 62 ADLISEMELMKLIG---KHKNIINLLGVCT-QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLV 137 (314)
T ss_pred HHHHHHHHHHHhcc---CCCCeeeEEEEEc-cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHH
Confidence 12344444333331 1222233333332 234467999999999998764321 1224555555
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+.++. +..+|..|++|+|++|.|||++ .++++|||....
T Consensus 138 ~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~ 183 (314)
T cd05099 138 SCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARG 183 (314)
T ss_pred HHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccc
Confidence 5444444 6789999999999999999976 489999997643
No 440
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.52 E-value=4.6e-07 Score=107.65 Aligned_cols=136 Identities=12% Similarity=0.140 Sum_probs=90.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+........ . ..++.+|+
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~------------------------------~------~~~~~~E~ 50 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA------------------------------I------RNQIIREL 50 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH------------------------------H------HHHHHHHH
Confidence 56899999999999865 78999999875432211 0 11234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++ .+...+.+...+.+ .....|||||++|.+|.++... ...++...+...+.+++ +..+|. .|++|+
T Consensus 51 ~~l~~l----~h~~iv~~~~~~~~-~~~~~lv~ey~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 124 (308)
T cd06615 51 KVLHEC----NSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHR 124 (308)
T ss_pred HHHHhC----CCCCCCeEEEEEee-CCEEEEEeeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEEC
Confidence 555554 23333444444432 3456799999999999887432 23345554444444444 667786 699999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 125 dl~p~nil~~~~~~~~l~dfg~~~~ 149 (308)
T cd06615 125 DVKPSNILVNSRGEIKLCDFGVSGQ 149 (308)
T ss_pred CCChHHEEEecCCcEEEccCCCccc
Confidence 9999999965 488999997643
No 441
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.52 E-value=4.5e-07 Score=104.31 Aligned_cols=138 Identities=17% Similarity=0.140 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+.+..... ..+ .-.+..|.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~---------------------------------~~~~~~e~ 50 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND--PKT---------------------------------IKEIADEM 50 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc--hHH---------------------------------HHHHHHHH
Confidence 68999999999999965 7999999997644221 000 01223444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.+++ +..-+.+-... .......+||||++|.+|.++..- ....+...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~~~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~d 124 (264)
T cd06626 51 KVLELLK----HPNLVKYYGVE-VHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRD 124 (264)
T ss_pred HHHHhCC----CCChhheeeeE-ecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 4444442 21111111111 123456799999999999887431 12245555554444444 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|+||++. .+++.|||....+
T Consensus 125 l~~~nil~~~~~~~kl~d~g~~~~~ 149 (264)
T cd06626 125 IKPANIFLDHNGVIKLGDFGCAVKL 149 (264)
T ss_pred CCHHHEEECCCCCEEEccccccccc
Confidence 999999975 4899999976544
No 442
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=98.52 E-value=3.6e-07 Score=106.14 Aligned_cols=136 Identities=20% Similarity=0.168 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||||+....... . ..-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~---------------------------------~~~~~~~e~ 50 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE---D---------------------------------EIEDIQQEI 50 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc---h---------------------------------HHHHHHHHH
Confidence 56899999999999965 7999999987422100 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++.+. +...+.+-..+. ......+||||++|.+|.+... ...++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~d 123 (274)
T cd06609 51 QFLSQCR----SPYITKYYGSFL-KGSKLWIIMEYCGGGSCLDLLK--PGKLDETYIAFILREVLLGLEYLHEEGKIHRD 123 (274)
T ss_pred HHHHHcC----CCCeeeeeEEEE-ECCeEEEEEEeeCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 5554443 222222222222 2345679999999999987643 33566666666665555 5678999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||++. .++++|||....+
T Consensus 124 l~p~ni~i~~~~~~~l~d~g~~~~~ 148 (274)
T cd06609 124 IKAANILLSEEGDVKLADFGVSGQL 148 (274)
T ss_pred CCHHHEEECCCCCEEEcccccceee
Confidence 999999965 5899999976544
No 443
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.52 E-value=4.9e-07 Score=106.69 Aligned_cols=137 Identities=16% Similarity=0.101 Sum_probs=88.4
Q ss_pred cccccccceEEEEEEec-CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.. +|. .|++|+.+...... ..-+|.+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~~~~~~ 51 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEN------------------------------------DHRDFAG 51 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHH------------------------------------HHHHHHH
Confidence 57999999999999976 454 47888664221110 0113566
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLFT 550 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~~ 550 (1578)
|...+.++.. +...+.+..... .....+++|||++|.+|.++..-.. ..++...+...+.+
T Consensus 52 E~~~l~~l~~---hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 127 (297)
T cd05089 52 ELEVLCKLGH---HPNIINLLGACE-NRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASD 127 (297)
T ss_pred HHHHHHhhcC---CCchhheEEEEc-cCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHH
Confidence 7666666531 112222222221 2244679999999999987642110 12445555555555
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+. ++.+|..|++|+|++|.|||+. .++++|||...
T Consensus 128 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~ 167 (297)
T cd05089 128 VATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR 167 (297)
T ss_pred HHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCc
Confidence 54 7889999999999999999975 58999999753
No 444
>PF00085 Thioredoxin: Thioredoxin; InterPro: IPR013766 Thioredoxins [, , , ] are small disulphide-containing redox proteins that have been found in all the kingdoms of living organisms. Thioredoxin serves as a general protein disulphide oxidoreductase. It interacts with a broad range of proteins by a redox mechanism based on reversible oxidation of two cysteine thiol groups to a disulphide, accompanied by the transfer of two electrons and two protons. The net result is the covalent interconversion of a disulphide and a dithiol. In the NADPH-dependent protein disulphide reduction, thioredoxin reductase (TR) catalyses the reduction of oxidised thioredoxin (trx) by NADPH using FAD and its redox-active disulphide; reduced thioredoxin then directly reduces the disulphide in the substrate protein []. Thioredoxin is present in prokaryotes and eukaryotes and the sequence around the redox-active disulphide bond is well conserved. All thioredoxins contain a cis-proline located in a loop preceding beta-strand 4, which makes contact with the active site cysteines, and is important for stability and function []. Thioredoxin belongs to a structural family that includes glutaredoxin, glutathione peroxidase, bacterial protein disulphide isomerase DsbA, and the N-terminal domain of glutathione transferase []. Thioredoxins have a beta-alpha unit preceding the motif common to all these proteins. A number of eukaryotic proteins contain domains evolutionary related to thioredoxin, most of them are protein disulphide isomerases (PDI). PDI (5.3.4.1 from EC) [, , ] is an endoplasmic reticulum multi-functional enzyme that catalyses the formation and rearrangement of disulphide bonds during protein folding []. All PDI contains two or three (ERp72) copies of the thioredoxin domain, each of which contributes to disulphide isomerase activity, but which are functionally non-equivalent []. Moreover, PDI exhibits chaperone-like activity towards proteins that contain no disulphide bonds, i.e. behaving independently of its disulphide isomerase activity []. The various forms of PDI which are currently known are: PDI major isozyme; a multifunctional protein that also function as the beta subunit of prolyl 4-hydroxylase (1.14.11.2 from EC), as a component of oligosaccharyl transferase (2.4.1.119 from EC), as thyroxine deiodinase (3.8.1.4 from EC), as glutathione-insulin transhydrogenase (1.8.4.2 from EC) and as a thyroid hormone-binding protein ERp60 (ER-60; 58 Kd microsomal protein). ERp60 was originally thought to be a phosphoinositide-specific phospholipase C isozyme and later to be a protease. ERp72. ERp5. Bacterial proteins that act as thiol:disulphide interchange proteins that allows disulphide bond formation in some periplasmic proteins also contain a thioredoxin domain. These proteins include: Escherichia coli DsbA (or PrfA) and its orthologs in Vibrio cholerae (TtcpG) and Haemophilus influenzae (Por). E. coli DsbC (or XpRA) and its orthologues in Erwinia chrysanthemi and H. influenzae. E. coli DsbD (or DipZ) and its H. influenzae orthologue. E. coli DsbE (or CcmG) and orthologues in H. influenzae. Rhodobacter capsulatus (Rhodopseudomonas capsulata) (HelX), Rhiziobiacae (CycY and TlpA). This entry represents the thioredoxin domain.; GO: 0045454 cell redox homeostasis; PDB: 3ED3_B 1EP7_A 1EP8_B 1TOF_A 2OE3_B 2OE1_B 2OE0_B 1V98_A 3H79_A 3CXG_A ....
Probab=98.52 E-value=2.8e-08 Score=97.73 Aligned_cols=77 Identities=31% Similarity=0.488 Sum_probs=57.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.+++.+|++.+.. ++++++|.||+|||++|+.+.|.|+++++.+++ ++.+..++.+. +|+..++.+
T Consensus 3 ~lt~~~f~~~i~~--~~~~vvv~f~~~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~-------- 71 (103)
T PF00085_consen 3 VLTDENFEKFINE--SDKPVVVYFYAPWCPPCKAFKPILEKLAKEYKD-NVKFAKVDCDENKELCKKYGVKS-------- 71 (103)
T ss_dssp EESTTTHHHHHTT--TSSEEEEEEESTTSHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTSHHHHHHTTCSS--------
T ss_pred ECCHHHHHHHHHc--cCCCEEEEEeCCCCCccccccceeccccccccc-ccccchhhhhccchhhhccCCCC--------
Confidence 3566788888854 679999999999999999999999999999996 44444333332 455545444
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
+|++.++..|-
T Consensus 72 -----~Pt~~~~~~g~ 82 (103)
T PF00085_consen 72 -----VPTIIFFKNGK 82 (103)
T ss_dssp -----SSEEEEEETTE
T ss_pred -----CCEEEEEECCc
Confidence 49988888664
No 445
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.52 E-value=4.3e-07 Score=105.87 Aligned_cols=137 Identities=12% Similarity=0.072 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+........ .+.++..|.
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~e~ 50 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ------------------------------------EQKRLLMDL 50 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH------------------------------------HHHHHHHHH
Confidence 56899999999999975 79999999876543211 011122222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHHHc-Cc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIFQT-GF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~~~-G~ 561 (1578)
..+.+ ...+...+.+...+. -.....|+|||++| .+.++.. . ....++...+...+.++. +..+|.. |+
T Consensus 51 ~~~~~---~~~~~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i 125 (283)
T cd06617 51 DISMR---SVDCPYTVTFYGALF-REGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV 125 (283)
T ss_pred HHHHH---HcCCCCeeeeeEEEe-cCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 22222 122222233444332 23457899999986 4444321 1 112456666666666655 6788887 99
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|+||++. .++++|||....
T Consensus 126 ~h~dlkp~nil~~~~~~~kl~dfg~~~~ 153 (283)
T cd06617 126 IHRDVKPSNVLINRNGQVKLCDFGISGY 153 (283)
T ss_pred ecCCCCHHHEEECCCCCEEEeecccccc
Confidence 9999999999975 589999997654
No 446
>PHA02624 large T antigen; Provisional
Probab=98.51 E-value=5.9e-08 Score=120.27 Aligned_cols=64 Identities=33% Similarity=0.520 Sum_probs=58.5
Q ss_pred ccccCCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 633 CAVSLDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
.....++|++|||+++| +.++||+|||+++++||||++++ .++|++|++||++|+|+.+|..|+
T Consensus 7 ree~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd---eekfk~Ln~AYevL~d~~k~~r~~ 72 (647)
T PHA02624 7 REESKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD---EEKMKRLNSLYKKLQEGVKSARQS 72 (647)
T ss_pred hHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc---HHHHHHHHHHHHHHhcHHHhhhcc
Confidence 44567899999999999 99999999999999999999754 689999999999999999999993
No 447
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=98.51 E-value=5e-07 Score=105.92 Aligned_cols=136 Identities=17% Similarity=0.081 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
..||.|++|+||+|... ++..||||+.+.+.... .+-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~ 54 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD------------------------------------MQAD 54 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH------------------------------------HHHH
Confidence 57899999999999863 57899999876432211 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------------cCCCH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------------KGFSL 541 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------------~~~~~ 541 (1578)
|.+|+..+.++. +...+.+...+. ......++|||++|.+|.+...... ..++.
T Consensus 55 ~~~ei~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (288)
T cd05050 55 FQREAALMAEFD----HPNIVKLLGVCA-VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC 129 (288)
T ss_pred HHHHHHHHHhcC----CCchheEEEEEc-CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCH
Confidence 445555555442 222233333332 2235689999999998877643110 12344
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 130 ~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 178 (288)
T cd05050 130 TEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 178 (288)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccce
Confidence 44455555544 6789999999999999999965 48899999764
No 448
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.51 E-value=4.2e-07 Score=106.42 Aligned_cols=136 Identities=14% Similarity=0.120 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|... +|+.||+|+......... . -++.+|.
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~------------------------------~------~~~~~E~ 54 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSV------------------------------R------KQILREL 54 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchH------------------------------H------HHHHHHH
Confidence 56899999999999965 799999999764321110 0 1234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+..+ .+..-+.+-... ......+|||||++|.++.++.. ....++...+...+.++. +..+|. +|++|+
T Consensus 55 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~ 128 (284)
T cd06620 55 QIMHEC----RSPYIVSFYGAF-LNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHR 128 (284)
T ss_pred HHHHHc----CCCCcceEeeeE-ecCCEEEEEEecCCCCCHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 444443 222222222222 22356789999999999987632 122345444444444433 556775 799999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 129 dl~p~nil~~~~~~~~l~d~gl~~~ 153 (284)
T cd06620 129 DIKPSNILVNSRGQIKLCDFGVSGE 153 (284)
T ss_pred CCCHHHEEECCCCcEEEccCCcccc
Confidence 9999999965 489999997643
No 449
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.51 E-value=4.6e-07 Score=104.34 Aligned_cols=136 Identities=15% Similarity=0.092 Sum_probs=84.6
Q ss_pred ccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 410 PIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
.||.|++|+||+|... ++..||||......... ..-.+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~~ 45 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLE------------------------------------EVEQFLK 45 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHH------------------------------------HHHHHHH
Confidence 5899999999999864 24679999753211000 0012233
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|...+..+ .+..-+.+-.......+..+++|||..|.++.+...-.....+...+...+.++. +..+|..|++|
T Consensus 46 e~~~l~~l----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 121 (262)
T cd05058 46 EGIIMKDF----SHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH 121 (262)
T ss_pred HHHHHccC----CCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 43333322 2222233333332233456899999999999887432222344455544444444 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.|||+. .+++.|||...
T Consensus 122 ~dlk~~nili~~~~~~kl~dfg~~~ 146 (262)
T cd05058 122 RDLAARNCMLDESFTVKVADFGLAR 146 (262)
T ss_pred cccCcceEEEcCCCcEEECCccccc
Confidence 99999999965 58899999764
No 450
>KOG0193|consensus
Probab=98.51 E-value=2.1e-07 Score=113.50 Aligned_cols=131 Identities=18% Similarity=0.195 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+||+|.||||+.+ | +||||+..-.--. +.-+ --|++|..
T Consensus 398 ~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt-------------------------~~ql----------qaFKnEVa 440 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPT-------------------------PEQL----------QAFKNEVA 440 (678)
T ss_pred ceeccccccceeecccc-c-ceEEEEEecCCCC-------------------------HHHH----------HHHHHHHH
Confidence 68999999999999876 3 7999998522110 0000 12788999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCc--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSST--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
|++.-|+.- .+ .+..++++ ..+|+.|++|-+|.......+..++...+..+.-++. +..+|..+++|+
T Consensus 441 ~lkkTRH~N----Il----LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHr 512 (678)
T KOG0193|consen 441 VLKKTRHEN----IL----LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHR 512 (678)
T ss_pred HHhhcchhh----he----eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 998887531 11 12333332 2589999999999987665555666554444443333 677999999999
Q ss_pred CCCCCCCCC---CeeEEecCCch
Q psy12972 565 DPHSGNDVN---TWLYPVDLGDK 584 (1578)
Q Consensus 565 DpHPGNilv---~~v~liDfG~~ 584 (1578)
|++.-||++ +.|++-|||+.
T Consensus 513 DLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 513 DLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred hccccceEEccCCcEEEecccce
Confidence 999999994 46999999964
No 451
>cd02995 PDI_a_PDI_a'_C PDIa family, C-terminal TRX domain (a') subfamily; composed of the C-terminal redox active a' domains of PDI, ERp72, ERp57 (or ERp60) and EFP1. PDI, ERp72 and ERp57 are endoplasmic reticulum (ER)-resident eukaryotic proteins involved in oxidative protein folding. They are oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. PDI and ERp57 have the abb'a' domain structure (where a and a' are redox active TRX domains while b and b' are redox inactive TRX-like domains). PDI also contains an acidic region (c domain) after the a' domain that is absent in ERp57. ERp72 has an additional a domain at the N-terminus (a"abb'a' domain structure). ERp57 interacts with the lectin chaperones, calnexin and calreticu
Probab=98.51 E-value=3.6e-08 Score=97.34 Aligned_cols=78 Identities=21% Similarity=0.274 Sum_probs=54.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Cc--ceeeeeecccCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GV--GFFTVHYDLFGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~v--g~v~~~~~~~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|++.+.. ++++++|.||||||++|+.+.|.|+++++.+++. .+ +.++|..+..+....
T Consensus 4 ~l~~~~f~~~i~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~----------- 70 (104)
T cd02995 4 VVVGKNFDEVVLD--SDKDVLVEFYAPWCGHCKALAPIYEELAEKLKGDDNVVIAKMDATANDVPSEFV----------- 70 (104)
T ss_pred EEchhhhHHHHhC--CCCcEEEEEECCCCHHHHHHhhHHHHHHHHhcCCCCEEEEEEeCcchhhhhhcc-----------
Confidence 4556678777744 3578999999999999999999999999999873 34 334443222222222
Q ss_pred cccccCcccccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~ 841 (1578)
+..+|++.+|..+-
T Consensus 71 --~~~~Pt~~~~~~~~ 84 (104)
T cd02995 71 --VDGFPTILFFPAGD 84 (104)
T ss_pred --CCCCCEEEEEcCCC
Confidence 24459988887654
No 452
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.51 E-value=5.6e-07 Score=103.34 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=88.5
Q ss_pred cccc-cccceEEEEEEecCCCEEEEEEec-chhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIA-AASLAQVFRAVTKEGVEVAVKVQY-IDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~Pla-saSiaQVhrA~l~~G~~VAVKVq~-P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
..|| +|+.|.||+... +|+.+|||.-. +++-..+..+ .+.+ .....-.+.+|
T Consensus 37 ~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~----------------~~~~---------~~~~~~r~~rE 90 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKD----------------RYLF---------TGLERTRAFAE 90 (239)
T ss_pred ceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhh----------------cccc---------cchhhhHHHHH
Confidence 4676 888888998876 47889999764 3332111111 0000 00112235678
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCC------CCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDK------SSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~------~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~ 559 (1578)
++.+.++.+ ..+.+|+++... ..+.+|||||++| .++.++. ....++. +....+.+ .+..+|..
T Consensus 91 ~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l--~~~~l~~-~~~~~i~~-~l~~lH~~ 161 (239)
T PRK01723 91 FRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALL--QEAPLSE-EQWQAIGQ-LIARFHDA 161 (239)
T ss_pred HHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHH--hcCCCCH-HHHHHHHH-HHHHHHHC
Confidence 888888864 346677776421 1133699999998 5676652 2333343 33344443 47899999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|+||+|||+. .+++||||..
T Consensus 162 GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 162 GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 999999999999974 4888888854
No 453
>PF13848 Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_B 3BOA_A 2B5E_A 1BJX_A 2K18_A 3UEM_A 3BJ5_A 2BJX_A 2R2J_A 2L4C_A ....
Probab=98.51 E-value=3.4e-06 Score=92.32 Aligned_cols=169 Identities=17% Similarity=0.254 Sum_probs=119.9
Q ss_pred cccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc-cccccCCC-CCHHHHHHHHHhhCCCccc
Q psy12972 890 QVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR-TSFFKEPS-FSVQKMVEFFRLKLPYKLI 967 (1578)
Q Consensus 890 ~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~-~~~y~~G~-~s~~~L~~fi~~~lp~~vv 967 (1578)
.....|.++|+.+.+. +.|+.+. +.++|+++++.. |++++|+++. ....|.|. .+.++|.+||....-| .+
T Consensus 7 ~~~~~f~~~A~~~~~~-~~F~~~~---~~~~~~~~~~~~--p~i~~~k~~~~~~~~y~~~~~~~~~l~~fI~~~~~P-~v 79 (184)
T PF13848_consen 7 ELFEIFEEAAEKLKGD-YQFGVTF---NEELAKKYGIKE--PTIVVYKKFDEKPVVYDGDKFTPEELKKFIKKNSFP-LV 79 (184)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEE----HHHHHHCTCSS--SEEEEEECTTTSEEEESSSTTSHHHHHHHHHHHSST-SC
T ss_pred HHHHHHHHHHHhCcCC-cEEEEEc---HHHHHHHhCCCC--CcEEEeccCCCCceecccccCCHHHHHHHHHHhccc-cc
Confidence 3456899999999976 8999765 678999999974 9999998843 23344476 8999999999876533 37
Q ss_pred cccccccHHHHhhcccCCCcEEEEEeccCCchHHHHH-----HHHhhcCCCeEEEEEEcccCCChhHHhhcCCC-CCCcE
Q psy12972 968 VPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL-----INAFKHRTTIVFGVIVYDQEDSSSVFQRFKVP-GDKDS 1041 (1578)
Q Consensus 968 ~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~-----~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~-~~~Pt 1041 (1578)
..+|.+++..+.... ..+++++|..+........ ..|.++++++.|++++.+ ..+.+++.+++. ...|+
T Consensus 80 ~~~t~~n~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~f~~~d~~--~~~~~~~~~~i~~~~~P~ 154 (184)
T PF13848_consen 80 PELTPENFEKLFSSP---KPPVLILFDNKDNESTEAFKKELQDIAKKFKGKINFVYVDAD--DFPRLLKYFGIDEDDLPA 154 (184)
T ss_dssp EEESTTHHHHHHSTS---SEEEEEEEETTTHHHHHHHHHHHHHHHHCTTTTSEEEEEETT--TTHHHHHHTTTTTSSSSE
T ss_pred cccchhhHHHHhcCC---CceEEEEEEcCCchhHHHHHHHHHHHHHhcCCeEEEEEeehH--HhHHHHHHcCCCCccCCE
Confidence 888999999998773 3446666654433322222 234467888999999665 667899999998 46799
Q ss_pred EEEeccCCCCCccccccCCCCchhhhhhhh
Q psy12972 1042 LLIFKEDKDRPSASITMNSIPVPTLQDITD 1071 (1578)
Q Consensus 1042 llvfk~~~~~~~~~l~~~~l~~~~L~~fI~ 1071 (1578)
+++++..... ..+...+.++...|..|++
T Consensus 155 ~vi~~~~~~~-~~~~~~~~~~~~~i~~Fl~ 183 (184)
T PF13848_consen 155 LVIFDSNKGK-YYYLPEGEITPESIEKFLN 183 (184)
T ss_dssp EEEEETTTSE-EEE--SSCGCHHHHHHHHH
T ss_pred EEEEECCCCc-EEcCCCCCCCHHHHHHHhc
Confidence 9999644332 2222356677788888875
No 454
>TIGR00412 redox_disulf_2 small redox-active disulfide protein 2. This small protein is found in three archaeal species so far (Methanococcus jannaschii, Archeoglobus fulgidus, and Methanobacterium thermoautotrophicum) as well as in Anabaena PCC7120. It is homologous to thioredoxins, glutaredoxins, and protein disulfide isomerases, and shares with them a redox-active disulfide. The redox active disulfide region CXXC motif resembles neither thioredoxin nor glutaredoxin. A closely related protein found in the same three Archaea, described by redox_disulf_1, has a glutaredoxin-like CP[YH]C sequence; it has been characterized in functional assays as redox-active but unlikely to be a thioredoxin or glutaredoxin.
Probab=98.50 E-value=1.8e-07 Score=87.72 Aligned_cols=72 Identities=26% Similarity=0.331 Sum_probs=58.0
Q ss_pred EEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCC-CCHHHHHH
Q psy12972 878 ILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPS-FSVQKMVE 956 (1578)
Q Consensus 878 V~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~-~s~~~L~~ 956 (1578)
|.||++||++|+.+.|.++++++++... +.+.+|| +.+.+.++|+.+ .||+++ +|+.. ..|. .+.+.|.+
T Consensus 3 i~~~a~~C~~C~~~~~~~~~~~~e~~~~-~~~~~v~---~~~~a~~~~v~~-vPti~i--~G~~~--~~G~~~~~~~l~~ 73 (76)
T TIGR00412 3 IQIYGTGCANCQMTEKNVKKAVEELGID-AEFEKVT---DMNEILEAGVTA-TPGVAV--DGELV--IMGKIPSKEEIKE 73 (76)
T ss_pred EEEECCCCcCHHHHHHHHHHHHHHcCCC-eEEEEeC---CHHHHHHcCCCc-CCEEEE--CCEEE--EEeccCCHHHHHH
Confidence 7899999999999999999999998654 8888887 345588999998 999998 88766 3364 34467776
Q ss_pred HH
Q psy12972 957 FF 958 (1578)
Q Consensus 957 fi 958 (1578)
++
T Consensus 74 ~l 75 (76)
T TIGR00412 74 IL 75 (76)
T ss_pred Hh
Confidence 65
No 455
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.50 E-value=6.2e-07 Score=103.15 Aligned_cols=134 Identities=18% Similarity=0.133 Sum_probs=90.4
Q ss_pred ccccccceEEEEEEec--C--CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 410 PIAAASLAQVFRAVTK--E--GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~--~--G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
-||.|++|+||+|+.. + +..||+|+.+..... ..+-++..
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------------------------------------~~~~~~~~ 45 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------------------------------------AGKKEFLR 45 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch------------------------------------HHHHHHHH
Confidence 3799999999999853 3 378999987644221 01123445
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|.+.+.++ .+..-+.+...+ .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|
T Consensus 46 e~~~l~~l----~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 46 EASVMAQL----DHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLK-KRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred HHHHHHhc----CCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 55555444 232334443333 2345689999999999987643 122466666666666655 67889999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~ 144 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRA 144 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccce
Confidence 99999999965 489999997643
No 456
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.50 E-value=3.9e-07 Score=107.01 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||.|++|.||+|+.. +|+.||||+.+...... + ..-++.+|.
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~---~--------------------------------~~~~~~~E~ 51 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE---G--------------------------------IPPTALREI 51 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc---C--------------------------------CchHHHHHH
Confidence 46899999999999965 79999999875322110 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHhh----cCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLLE----KGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~~----~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
..+.++.+ +...+.+..+...... .-++||||++| .+.+...... ..++...+...+.+++ +..+|
T Consensus 52 ~~l~~l~~---~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 52 SLLQMLSE---SIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHccC---CCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55554432 1122233333221111 14799999998 5655432111 2356666666555555 78899
Q ss_pred HcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
..|++|+|++|.||+++ .+++.|||....
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 99999999999999965 378899997643
No 457
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.50 E-value=2.2e-07 Score=108.45 Aligned_cols=136 Identities=18% Similarity=0.119 Sum_probs=85.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+.+...... . .+.++..|.
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~--------------------~---------------~~~~~~~ei 50 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--------------------G---------------VPSSALREI 50 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc--------------------c---------------CccchhHHH
Confidence 56899999999999975 79999999875321110 0 001123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+-..+. -....+++|||++| ++.+........++...+...+.+++ +..+|..|++|+|
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~d 124 (284)
T cd07839 51 CLLKELK----HKNIVRLYDVLH-SDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRD 124 (284)
T ss_pred HHHHhcC----CCCeeeHHHHhc-cCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 4444432 111111111211 23456799999986 45443221233466666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+||++. .+++.|||...
T Consensus 125 l~~~nil~~~~~~~~l~dfg~~~ 147 (284)
T cd07839 125 LKPQNLLINKNGELKLADFGLAR 147 (284)
T ss_pred CCHHHEEEcCCCcEEECccchhh
Confidence 999999965 58999999764
No 458
>KOG0612|consensus
Probab=98.50 E-value=2.1e-07 Score=119.81 Aligned_cols=136 Identities=16% Similarity=0.223 Sum_probs=85.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhH-HHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERF-VGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~-~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+-||.|.||-||.-+.+ +++..|.|+.... +.+ +.|-+.++--.+++.. -+-.||+
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~--eMlKr~~tA~F~EERDimv~----~ns~Wiv---------------- 138 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKW--EMLKRAETACFREERDIMVF----GNSEWIV---------------- 138 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHH--HHhhchhHHHHHHHhHHHHc----CCcHHHH----------------
Confidence 68999999999999976 6778888876421 011 1222222222222111 1223332
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcC-CCHHHHHH-HHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKG-FSLADVDR-KLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~-~~~~~v~~-~l~~~~--l~~i~~~G~v 562 (1578)
.+.-.|.+...+ +|||||++|+.|-.+.. ..+ ++ ++.++ .+.++. +..||..|+|
T Consensus 139 -----~LhyAFQD~~~L-------------YlVMdY~pGGDlltLlS--k~~~~p-E~~ArFY~aEiVlAldslH~mgyV 197 (1317)
T KOG0612|consen 139 -----QLHYAFQDERYL-------------YLVMDYMPGGDLLTLLS--KFDRLP-EDWARFYTAEIVLALDSLHSMGYV 197 (1317)
T ss_pred -----HHHHHhcCccce-------------EEEEecccCchHHHHHh--hcCCCh-HHHHHHHHHHHHHHHHHHHhccce
Confidence 233345555443 48999999999887743 334 43 44443 333333 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|||+||.|||+. .+++.|||.-.++
T Consensus 198 HRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 198 HRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred eccCCcceeEecccCcEeeccchhHHhc
Confidence 999999999954 6999999965443
No 459
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.50 E-value=6.8e-07 Score=105.02 Aligned_cols=137 Identities=18% Similarity=0.125 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEecC-----------------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-----------------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-----------------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
+.||.|++|.||+|+..+ +..||+|+...+....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~----------------------------- 61 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDN----------------------------- 61 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHH-----------------------------
Confidence 568999999999998642 3568999876543211
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh----------cCCCH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE----------KGFSL 541 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~----------~~~~~ 541 (1578)
..-+|..|++.+.++. +...+.+...+. .....+++|||++|.+|.+...-.. ..++.
T Consensus 62 -------~~~~~~~e~~~l~~l~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~ 129 (296)
T cd05051 62 -------AREDFLKEVKILSRLS----DPNIARLLGVCT-VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSF 129 (296)
T ss_pred -------HHHHHHHHHHHHHhcC----CCCEeEEEEEEe-cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCH
Confidence 0113455555555543 222233333332 2245789999999999887643111 13555
Q ss_pred HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 542 ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 542 ~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+...+.++. +..+|..|++|+|++|.||+++ .+++.|||....
T Consensus 130 ~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 179 (296)
T cd05051 130 STLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRN 179 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceee
Confidence 66666555555 6789999999999999999975 488899997643
No 460
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.50 E-value=6.4e-07 Score=103.60 Aligned_cols=138 Identities=14% Similarity=0.181 Sum_probs=87.6
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|++.. +..||||+.+...... .+ .-.+.
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~---------------------------------~~~~~ 49 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTY--SE---------------------------------IEEFL 49 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCH--HH---------------------------------HHHHH
Confidence 578999999999999752 4789999875432110 00 01234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~-- 552 (1578)
.|...+.++ .+..-+.+.....+.. ...+++|||++|.++.+...... ..++...+...+.++.
T Consensus 50 ~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~a 125 (273)
T cd05035 50 SEAACMKDF----DHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALG 125 (273)
T ss_pred HHHHHHHhC----CCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHH
Confidence 454444433 2222222222222111 12589999999999887643221 2355555555555555
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 126 L~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 126 MEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred HHHHHhCCeeccccchheEEECCCCeEEECCcccee
Confidence 7889999999999999999965 58999999754
No 461
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.49 E-value=6.9e-07 Score=106.17 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=95.5
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
...++..|... +.||.|++|+||+|+.. +|+.||||.....-... + .
T Consensus 10 ~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~---~---------------------~------ 57 (308)
T cd06634 10 KDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS---N---------------------E------ 57 (308)
T ss_pred cCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC---h---------------------H------
Confidence 34455566654 67999999999999965 78999999775321100 0 0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..-++..|++.++++. +...+.+...+. -....+|||||+.| ++.+........++...+...+.+++
T Consensus 58 ----~~~~~~~e~~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~ 127 (308)
T cd06634 58 ----KWQDIIKEVRFLQKLR----HPNTIQYRGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQG 127 (308)
T ss_pred ----HHHHHHHHHHHHHhCC----CCCcccEEEEEE-cCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 0112344555555543 222233333332 23456899999986 56554333334466666666655554
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .+++.|||...
T Consensus 128 l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 163 (308)
T cd06634 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163 (308)
T ss_pred HHHHHhCCcccCCCCHHhEEECCCCcEEECCcccce
Confidence 6889999999999999999965 48999999754
No 462
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.49 E-value=5.3e-07 Score=106.60 Aligned_cols=135 Identities=18% Similarity=0.174 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||...-..... .-.+.+|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------~~~~~~e~ 67 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK-------------------------------------KELIINEI 67 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch-------------------------------------HHHHHHHH
Confidence 5799999999999985 589999999763210000 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+..+ .+...+.+-..+. .....++||||++|.++.+.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~d 140 (296)
T cd06655 68 LVMKEL----KNPNIVNFLDSFL-VGDELFVVMEYLAGGSLTDVV--TETCMDEAQIAAVCRECLQALEFLHANQVIHRD 140 (296)
T ss_pred HHHHhc----CCCceeeeeeeEe-cCceEEEEEEecCCCcHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 444433 2222222222221 234568999999999998763 344567777666655554 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|.||+++ .++++|||....+
T Consensus 141 L~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 141 IKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred CCHHHEEECCCCCEEEccCccchhc
Confidence 999999975 5899999976443
No 463
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.49 E-value=6e-07 Score=105.36 Aligned_cols=139 Identities=16% Similarity=0.123 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|.||+|... +++.||+|+..+.... ..+-++.+|.
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------------~~~~~~~~e~ 50 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP------------------------------------DLQKQILREL 50 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch------------------------------------HHHHHHHHHH
Confidence 67999999999999975 6899999987543211 0112345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhH-h--hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGL-L--EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l-~--~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +..-+.+...+.+. ....+|||||++|.+|.++... . ...++...+...+.+++ +..+|..|+
T Consensus 51 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i 126 (287)
T cd06621 51 EINKSCK----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI 126 (287)
T ss_pred HHHHhCC----CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 6665543 22223333333222 2345799999999999875331 1 12345555555555544 678899999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 127 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 127 IHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred ccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 9999999999965 5899999976443
No 464
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=98.49 E-value=6.1e-07 Score=103.74 Aligned_cols=134 Identities=19% Similarity=0.142 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+...+-.. .-++.+|.
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~--------------------------------------~~~~~~e~ 53 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 53 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH--------------------------------------HHHHHHHH
Confidence 56899999999999965 6899999987532110 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+...+.+...+. .....+++|||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~ 128 (263)
T cd05052 54 AVMKEI----KHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 128 (263)
T ss_pred HHHHhC----CCCChhheEEEEc-CCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeec
Confidence 544443 2222233333332 234567999999999998864321 12355555555455544 678999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 129 dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 129 DLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred ccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999975 58999999754
No 465
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=98.49 E-value=5.8e-07 Score=106.91 Aligned_cols=136 Identities=16% Similarity=0.117 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... + . ..-.+..|.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---~-------------------------~------~~~~~~~e~ 52 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---R-------------------------N------KVKRVLTEQ 52 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch---H-------------------------H------HHHHHHHHH
Confidence 57999999999999976 59999999886532110 0 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. + + .+++++.. .....+|+|||++|.+|.++.... ...++...+...+.+++ +..+|..|++
T Consensus 53 ~~l~~l~----~-~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~ 125 (316)
T cd05574 53 EILATLD----H-P--FLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125 (316)
T ss_pred HHHHhCC----C-C--CchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5555543 2 2 23333332 234568999999999998874321 12355555544444444 6789999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|+||.||++. .+++.|||...
T Consensus 126 H~dlkp~Nili~~~~~~~l~dfg~~~ 151 (316)
T cd05574 126 YRDLKPENILLHESGHIMLSDFDLSK 151 (316)
T ss_pred ccCCChHHeEEcCCCCEEEeecchhh
Confidence 999999999965 58889998653
No 466
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.49 E-value=6.3e-07 Score=106.16 Aligned_cols=137 Identities=16% Similarity=0.132 Sum_probs=89.5
Q ss_pred cccccccceEEEEEEec-CCC----EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGV----EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~----~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||+|++|+||+|+.. +|+ .||+|+..+..... ....+
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 56 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK------------------------------------ANVEF 56 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH------------------------------------HHHHH
Confidence 67999999999999854 565 57888775432211 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|+..+.++ .+..-+.+...+. .....++|||++|..+.+........++...+...+.++. +..+|..|+
T Consensus 57 ~~e~~~~~~l----~h~niv~~~~~~~--~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (303)
T cd05110 57 MDEALIMASM----DHPHLVRLLGVCL--SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL 130 (303)
T ss_pred HHHHHHHHhC----CCCCcccEEEEEc--CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence 4555555443 2323344433332 2346799999999888876432222355555555444444 678999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+|+|++|.||++. .++++|||....+
T Consensus 131 vH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 131 VHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eccccccceeeecCCCceEEccccccccc
Confidence 9999999999974 5899999977543
No 467
>KOG0580|consensus
Probab=98.49 E-value=1.2e-07 Score=104.23 Aligned_cols=162 Identities=17% Similarity=0.108 Sum_probs=94.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH--
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN-- 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~-- 485 (1578)
+|+|-|-||+||.|+.+ ++--||+||.... + +.. ......+++|+.-..
T Consensus 28 r~LgkgkFG~vYlarekks~~IvalKVlfKs---q----i~~---------------------~~v~~qlrREiEIqs~L 79 (281)
T KOG0580|consen 28 RPLGKGKFGNVYLAREKKSLFIVALKVLFKS---Q----ILK---------------------TQVEHQLRREIEIQSHL 79 (281)
T ss_pred ccccCCccccEeEeeeccCCcEEEEeeeeHH---H----HHH---------------------hcchhhhhheeEeeccc
Confidence 69999999999999965 7899999998421 1 000 011122222211100
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCch-hhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDK-EGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~-~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
---|+-|+...|-+ ..+-+|++||..+..+-.. ..-....++....+..+.++. +..+|..+++
T Consensus 80 ~hpnilrlY~~fhd-------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VI 146 (281)
T KOG0580|consen 80 RHPNILRLYGYFHD-------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVI 146 (281)
T ss_pred CCccHHhhhhheec-------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcc
Confidence 00122222222211 2334599999976665543 211122344443444343333 6678999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCc------hhhhhhhhhcccCCCCCCCCCCccccCcccc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD------KFRLVLATTLREDGYPDSGEWNPLEESPRMN 614 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~------~~~l~l~~~~~~~g~~D~G~~~~l~~~~r~~ 614 (1578)
|||++|.|+|.+ .+++.|||- +.|-.++ +..-|++.-|+...+.+..++
T Consensus 147 hRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlc---gt~dyl~pEmv~~~~hd~~Vd 204 (281)
T KOG0580|consen 147 HRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLC---GTLDYLPPEMVEGRGHDKFVD 204 (281)
T ss_pred cCCCCHHHhccCCCCCeeccCCCceeecCCCCceeee---cccccCCHhhcCCCCccchhh
Confidence 999999999966 589999993 3344444 223377888888766555544
No 468
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.49 E-value=5.2e-07 Score=119.48 Aligned_cols=139 Identities=13% Similarity=-0.001 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|.||+|+.. +++.||+|+........ . ..-.|..|+
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-----------------------------~------~~~~~~~EI 63 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-----------------------------R------EKSQLVIEV 63 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-----------------------------H------HHHHHHHHH
Confidence 67999999999999965 68899999875321100 0 001234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc--
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT-- 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~-- 559 (1578)
..+.++. +...|.+-..+.+-. ..-+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..
T Consensus 64 ~IL~~L~----HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~ 139 (1021)
T PTZ00266 64 NVMRELK----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKD 139 (1021)
T ss_pred HHHHHcC----CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhccc
Confidence 5555543 333344434332222 2346999999999998864321 13466666666666655 6777874
Q ss_pred -----CccccCCCCCCCCCCe--------------------eEEecCCchhh
Q psy12972 560 -----GFVHADPHSGNDVNTW--------------------LYPVDLGDKFR 586 (1578)
Q Consensus 560 -----G~vH~DpHPGNilv~~--------------------v~liDfG~~~~ 586 (1578)
+++|+|++|.|||+.. ++++|||....
T Consensus 140 ~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~ 191 (1021)
T PTZ00266 140 GPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN 191 (1021)
T ss_pred ccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence 4999999999999731 78899997643
No 469
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=98.49 E-value=7.1e-07 Score=110.38 Aligned_cols=33 Identities=21% Similarity=0.130 Sum_probs=29.0
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 252 L~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~ 287 (401)
T cd05107 252 MEFLASKNCVHRDLAARNVLICEGKLVKICDFGLAR 287 (401)
T ss_pred HHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcce
Confidence 6789999999999999999965 48899999764
No 470
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.48 E-value=4.9e-07 Score=104.04 Aligned_cols=136 Identities=15% Similarity=0.102 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||+|+....-... .-++..|.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~-------------------------------------~~~~~~e~~ 54 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK-------------------------------------QQDFQKEVQ 54 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhh-------------------------------------HHHHHHHHH
Confidence 5689999999999999889999999875321100 002334444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+.... .....-.++|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 55 ~l~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~d 129 (261)
T cd05148 55 ALKRLR----HKHLISLFAVC-SVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRD 129 (261)
T ss_pred HHhcCC----CcchhheeeeE-ecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 444332 11112222222 2234457999999999998874321 22355555555555544 6788999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||+++ .+++.|||....
T Consensus 130 l~~~nilv~~~~~~kl~d~g~~~~ 153 (261)
T cd05148 130 LAARNILVGEDLVCKVADFGLARL 153 (261)
T ss_pred cCcceEEEcCCceEEEccccchhh
Confidence 999999975 588999997644
No 471
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.48 E-value=4.4e-07 Score=106.65 Aligned_cols=138 Identities=17% Similarity=0.211 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||..+...... .+ ..++.+|.
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~------~~~~~~e~ 55 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-----------------------------GF------PITSLREI 55 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-----------------------------cc------hhhHHHHH
Confidence 67899999999999976 79999999875332110 00 11234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+++ +...+.+...+..- ....+|+|||++| .+.++.......++...+...+.+++ +..+|..|++|+
T Consensus 56 ~~l~~l~----h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~ 130 (293)
T cd07843 56 NILLKLQ----HPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHR 130 (293)
T ss_pred HHHHhcC----CCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 5555553 22223332222211 1567899999986 66665432233467777777666665 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 131 dl~p~nili~~~~~~~l~d~g~~~~ 155 (293)
T cd07843 131 DLKTSNLLLNNRGILKICDFGLARE 155 (293)
T ss_pred cCCHHHEEECCCCcEEEeecCceee
Confidence 9999999965 488999996643
No 472
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.48 E-value=6.8e-07 Score=103.37 Aligned_cols=142 Identities=17% Similarity=0.119 Sum_probs=91.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+...+...... -...-++.+|+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------------------------------~~~~~~~~~ei 55 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--------------------------------SKEVNALECEI 55 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--------------------------------hHHHHHHHHHH
Confidence 57999999999999964 7999999986432211000 00112356666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+++++ +..-+.+...+.+. ...-+++|||++|.+|.+... ....++...+...+.++. +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~-~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~ 130 (264)
T cd06653 56 QLLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK-AYGALTENVTRRYTRQILQGVSYLHSNMIVHR 130 (264)
T ss_pred HHHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 6666553 22223333333222 233579999999999987643 122345554444433333 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|+||++. .+++.|||...++
T Consensus 131 dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 131 DIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred CCCHHHEEEcCCCCEEECcccccccc
Confidence 9999999965 5889999976543
No 473
>KOG0197|consensus
Probab=98.48 E-value=3.7e-07 Score=110.77 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=101.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+-||+|-||.||.|......+||||.+.++.. .+-||.+||+
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------------------------------~~~~f~~Ea~ 253 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------------------------------SPEAFLREAQ 253 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------------------------------ChhHHHHHHH
Confidence 34799999999999987777999999988621 1236778999
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
-+.++++ ..-|..=.|...- ..-.|||||+.-++|.+...- ....++..+++....+++ ++.+-..++||||
T Consensus 254 iMk~L~H----~~lV~l~gV~~~~-~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRD 328 (468)
T KOG0197|consen 254 IMKKLRH----EKLVKLYGVCTKQ-EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRD 328 (468)
T ss_pred HHHhCcc----cCeEEEEEEEecC-CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchh
Confidence 9988763 3334444443211 124799999999999888543 235567777877777777 6778899999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
|-.-||||+ .+++-|||+..
T Consensus 329 LAARNiLV~~~~~vKIsDFGLAr 351 (468)
T KOG0197|consen 329 LAARNILVDEDLVVKISDFGLAR 351 (468)
T ss_pred hhhhheeeccCceEEEccccccc
Confidence 999999987 48888999875
No 474
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.48 E-value=5e-07 Score=106.84 Aligned_cols=141 Identities=19% Similarity=0.164 Sum_probs=89.4
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+...|..+ ..||.|++|+||+|+.. +|+.||||+........
T Consensus 19 ~~~~~~~~--~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------- 61 (297)
T cd06659 19 PRSLLENY--IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR----------------------------------- 61 (297)
T ss_pred chhhHHhh--hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccch-----------------------------------
Confidence 33444444 46999999999999965 79999999874321110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
+-.+.+|...+..+ .+...+.+-..+. .....+++|||++|.++.+.. ....++...+...+.+++ +..
T Consensus 62 --~~~~~~e~~~l~~l----~hp~i~~~~~~~~-~~~~~~iv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~L~~ 132 (297)
T cd06659 62 --RELLFNEVVIMRDY----QHQNVVEMYKSYL-VGEELWVLMEFLQGGALTDIV--SQTRLNEEQIATVCESVLQALCY 132 (297)
T ss_pred --HHHHHHHHHHHHhC----CCCchhhhhhhee-eCCeEEEEEecCCCCCHHHHH--hhcCCCHHHHHHHHHHHHHHHHH
Confidence 00112233222222 1111111111111 124568999999999887753 334566666655555554 678
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|++|+||++. .++++|||...
T Consensus 133 LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~ 165 (297)
T cd06659 133 LHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 165 (297)
T ss_pred HHhCCeecCCCCHHHeEEccCCcEEEeechhHh
Confidence 9999999999999999965 58999999754
No 475
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=98.48 E-value=7.1e-07 Score=103.16 Aligned_cols=141 Identities=17% Similarity=0.101 Sum_probs=90.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-|+.|++|.||+|... +|+.||||+.+...... .... .--.+.+|+
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~----------------------~~~~----------~~~~~~~E~ 55 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP----------------------ETSK----------EVNALECEI 55 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc----------------------ccHH----------HHHHHHHHH
Confidence 56899999999999975 69999999875321110 0000 001346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+...+.+- ....+++|||++|.+|.+... ....++...+...+.++. +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 130 (265)
T cd06652 56 QLLKNLL----HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK-SYGALTENVTRKYTRQILEGVSYLHSNMIVHR 130 (265)
T ss_pred HHHHhcC----CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecC
Confidence 7776663 22222222222111 123458999999999987643 122345555444444444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||+++ .++++|||....
T Consensus 131 dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 131 DIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred CCCHHHEEecCCCCEEECcCccccc
Confidence 9999999975 589999997654
No 476
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.47 E-value=2.9e-07 Score=106.18 Aligned_cols=82 Identities=9% Similarity=-0.017 Sum_probs=56.7
Q ss_pred eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC------
Q psy12972 503 VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT------ 574 (1578)
Q Consensus 503 v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~------ 574 (1578)
+.+...+.. ....++||||++|.+|.++.......++...+...+.++. +..+|..|++|+|++|.||+++
T Consensus 62 v~~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~ 140 (258)
T cd05078 62 VLNYGVCVC-GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK 140 (258)
T ss_pred hheeeEEEe-CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc
Confidence 444444332 2456899999999999876432223356555555444444 6788999999999999999963
Q ss_pred -----eeEEecCCchh
Q psy12972 575 -----WLYPVDLGDKF 585 (1578)
Q Consensus 575 -----~v~liDfG~~~ 585 (1578)
.+++.|||...
T Consensus 141 ~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 141 TGNPPFIKLSDPGISI 156 (258)
T ss_pred cCCCceEEeccccccc
Confidence 16788998653
No 477
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=98.47 E-value=7.8e-07 Score=102.57 Aligned_cols=137 Identities=16% Similarity=0.097 Sum_probs=90.1
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|+.|.||+|+.. +|+.||||+..+..... -..+-.+.+|.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~~e~~~ 46 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE----------------------------------TGQQEHIFSEKEI 46 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh----------------------------------hhHHHHHHHHHHH
Confidence 689999999999975 69999999886431100 0011234556655
Q ss_pred HHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPH 567 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpH 567 (1578)
+.++. +...+.+...+. .....+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|++
T Consensus 47 l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 47 LEECN----HPFIVKLYRTFK-DKKYIYMLMEYCLGGELWTILR-DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred HHhCC----CCCEeeeeeeEE-cCCccEEEEecCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 54442 222222222221 2345689999999999987643 123355555555544444 788999999999999
Q ss_pred CCCCCCC---eeEEecCCchhhh
Q psy12972 568 SGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 568 PGNilv~---~v~liDfG~~~~l 587 (1578)
|.||++. .++++|||....+
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~ 143 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKL 143 (262)
T ss_pred HHHEEEcCCCCEEEeeCCccccc
Confidence 9999965 5899999976443
No 478
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=98.47 E-value=8.4e-07 Score=101.82 Aligned_cols=137 Identities=18% Similarity=0.103 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+|+.++.. +|+.|++|.....-... ...-++.+|.
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------~~~~~~~~e~ 50 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-----------------------------------KERRDALNEI 50 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccch-----------------------------------hHHHHHHHHH
Confidence 67999999999999854 79999999753210000 0011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.++++. +...+.+...+.+ ....+++|||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~~~----h~~i~~~~~~~~~-~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~ 125 (256)
T cd08221 51 VILSLLQ----HPNIIAYYNHFMD-DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHR 125 (256)
T ss_pred HHHHhCC----CCCeeEEEeEEec-CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 6666552 3333444444433 35568999999999998864322 22356666665555544 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .+++.|||...
T Consensus 126 dl~p~ni~~~~~~~~kl~d~~~~~ 149 (256)
T cd08221 126 DIKTLNIFLTKAGLIKLGDFGISK 149 (256)
T ss_pred CCChHhEEEeCCCCEEECcCcceE
Confidence 9999999965 58999999653
No 479
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=98.47 E-value=2.1e-07 Score=119.19 Aligned_cols=99 Identities=17% Similarity=0.324 Sum_probs=78.9
Q ss_pred cccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECccc----hhhHhHcCccccCC
Q psy12972 860 HWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNE----QGLARRLGVGSQLP 931 (1578)
Q Consensus 860 ~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~----~~L~~k~gV~~~~P 931 (1578)
.+++++.+... ..+++++|+|||+||++|+.+++.. .++.+.+++ +.+.++|++++ .+++++|+|.+ +|
T Consensus 460 ~~~l~~~l~~a~~~gK~VlVdF~A~WC~~Ck~~e~~~~~~~~v~~~l~~--~~~v~vDvt~~~~~~~~l~~~~~v~g-~P 536 (571)
T PRK00293 460 VAELDQALAEAKGKGKPVMLDLYADWCVACKEFEKYTFSDPQVQQALAD--TVLLQADVTANNAEDVALLKHYNVLG-LP 536 (571)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEECCcCHhHHHHHHHhcCCHHHHHHhcC--CEEEEEECCCCChhhHHHHHHcCCCC-CC
Confidence 45555555432 3468999999999999999998875 677777763 78999999853 68999999998 99
Q ss_pred cEEEEc-CCccc--cccCCCCCHHHHHHHHHhh
Q psy12972 932 QIALLT-DGRTS--FFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 932 Tl~lf~-~G~~~--~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+++|. +|+.. ....|..+.+++.+++++.
T Consensus 537 t~~~~~~~G~~i~~~r~~G~~~~~~f~~~L~~~ 569 (571)
T PRK00293 537 TILFFDAQGQEIPDARVTGFMDAAAFAAHLRQL 569 (571)
T ss_pred EEEEECCCCCCcccccccCCCCHHHHHHHHHHh
Confidence 999995 78763 4566889999999999764
No 480
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.46 E-value=7.8e-07 Score=101.49 Aligned_cols=137 Identities=18% Similarity=0.143 Sum_probs=91.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.|+.|++|.||+|... +|++||||+....... .+-. -.+..|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------~~~~------~~~~~e~ 50 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-----------------------------EKER------EDALNEV 50 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-----------------------------hHHH------HHHHHHH
Confidence 57899999999999965 7999999987532211 0000 1123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.+++ +...+.+...+. .....+|+|||++|.+|.+...-. ...++...+...+.+++ +..+|..|++
T Consensus 51 ~~l~~l~----~~~~~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~ 125 (258)
T cd08215 51 KILKKLN----HPNIIKYYESFE-EKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKIL 125 (258)
T ss_pred HHHHhcC----CCChhheEEEEe-cCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444443 222222222222 225678999999999998764322 24567777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 126 H~dl~~~nil~~~~~~~~l~d~~~~~ 151 (258)
T cd08215 126 HRDIKPQNIFLTSNGLVKLGDFGISK 151 (258)
T ss_pred cccCChHHeEEcCCCcEEECCcccee
Confidence 999999999965 48889999653
No 481
>TIGR00424 APS_reduc 5'-adenylylsulfate reductase, thioredoxin-independent. This enzyme, involved in the assimilation of inorganic sulfate, is closely related to the thioredoxin-dependent PAPS reductase of Bacteria (CysH) and Saccharomyces cerevisiae. However, it has its own C-terminal thioredoxin-like domain and is not thioredoxin-dependent. Also, it has a substrate preference for 5'-adenylylsulfate (APS) over 3'-phosphoadenylylsulfate (PAPS) so the pathway does not require an APS kinase (CysC) to convert APS to PAPS. Arabidopsis thaliana appears to have three isozymes, all able to complement E. coli CysH mutants (even in backgrounds lacking thioredoxin or APS kinase) but likely localized to different compartments in Arabidopsis.
Probab=98.46 E-value=5.3e-08 Score=119.79 Aligned_cols=83 Identities=20% Similarity=0.303 Sum_probs=61.3
Q ss_pred hccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcce--eeeeecc--cC-ccccccCCcc
Q psy12972 746 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGF--FTVHYDL--FG-TTDGFSGQDS 820 (1578)
Q Consensus 746 ~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~--v~~~~~~--~~-~~~~i~g~~~ 820 (1578)
..+.++..||+..+...+.+++|||.||||||+||+.+.|.|+++|+++++.++.+ ++|+.+. ++ +...+
T Consensus 352 ~Vv~L~~~nf~~~v~~~~~~k~VLV~FyApWC~~Ck~m~P~~eelA~~~~~~~v~~~kVdvD~~~~~~~~~~~~I----- 426 (463)
T TIGR00424 352 NVVSLSRPGIENLLKLEERKEAWLVVLYAPWCPFCQAMEASYLELAEKLAGSGVKVAKFRADGDQKEFAKQELQL----- 426 (463)
T ss_pred CeEECCHHHHHHHHhhhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHhccCCcEEEEEECCCCccHHHHHHcCC-----
Confidence 34567788999988545788999999999999999999999999999998754433 4443221 11 23333
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
..+||+.+|+++.
T Consensus 427 --------~~~PTii~Fk~g~ 439 (463)
T TIGR00424 427 --------GSFPTILFFPKHS 439 (463)
T ss_pred --------CccceEEEEECCC
Confidence 3449999998764
No 482
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.46 E-value=4.7e-07 Score=109.79 Aligned_cols=135 Identities=16% Similarity=0.172 Sum_probs=85.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||||+..-..... . ....+.+|+
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------~----------~~~~~~~E~ 66 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-------------------------T----------HAKRAYREL 66 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-------------------------h----------HHHHHHHHH
Confidence 68999999999999964 89999999763111000 0 001123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-----CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-----KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-----~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+.++. +..-+.+...+.. .....+|||||++| .+.+.. ...++...+...+.+++ +..+|..|
T Consensus 67 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 67 VLMKLVN----HKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVI---QMDLDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred HHHHhcC----CCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHH---hhcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555442 2222222222211 11235899999977 444432 22366666655555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+||++. .++++|||....
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 167 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLART 167 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCcccee
Confidence 99999999999965 589999997643
No 483
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.46 E-value=4.5e-07 Score=104.30 Aligned_cols=135 Identities=15% Similarity=0.143 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+.. +|+.||+|+......... ...-++..|.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------~~~~~~~~e~ 51 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----------------------------------GSVRNVLNER 51 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch----------------------------------hHHHHHHHHH
Confidence 68999999999999976 699999998863211000 0011234444
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++++. ++. +++++. .-....++||||++|.+|.+.... ...++...+...+.+++ +..+|..|++|
T Consensus 52 ~~l~~l~-----h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h 123 (258)
T cd05578 52 RILQELN-----HPF--LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ-KVKFSEEQVKFWICEIVLALEYLHSKGIIH 123 (258)
T ss_pred HHHHhCC-----CCC--hHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 4444432 121 222221 122346899999999999876432 23567767766666655 77899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 124 ~dl~~~nil~~~~~~~~l~d~~~~~ 148 (258)
T cd05578 124 RDIKPDNILLDEQGHVHITDFNIAT 148 (258)
T ss_pred cCCCHHHeEEcCCCCEEEeeccccc
Confidence 99999999965 58999999754
No 484
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.46 E-value=4.8e-07 Score=116.31 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=48.8
Q ss_pred CceEEEEeccCCCcCCchhhHhhcCC-----------------C--HHHHHHHHHHHH--HHHHHHcCccccCCCCCCCC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLEKGF-----------------S--LADVDRKLFTAF--AEQIFQTGFVHADPHSGNDV 572 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~~~~-----------------~--~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNil 572 (1578)
...+|||||++|.+|.++........ . ...+...+.+++ +..+|..|++|||+||.|||
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL 287 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII 287 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence 35679999999999877643111000 0 011112222222 77899999999999999999
Q ss_pred CC----eeEEecCCchhh
Q psy12972 573 NT----WLYPVDLGDKFR 586 (1578)
Q Consensus 573 v~----~v~liDfG~~~~ 586 (1578)
+. .++++|||....
T Consensus 288 l~~~~~~~KL~DFGlA~~ 305 (566)
T PLN03225 288 FSEGSGSFKIIDLGAAAD 305 (566)
T ss_pred EeCCCCcEEEEeCCCccc
Confidence 64 489999998743
No 485
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.46 E-value=9.1e-07 Score=102.43 Aligned_cols=142 Identities=16% Similarity=0.128 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +|+.||+|+........- ....-..+.+|+
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~--------------------------------~~~~~~~~~~e~ 55 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPE--------------------------------TSKEVSALECEI 55 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCch--------------------------------hHHHHHHHHHHH
Confidence 67999999999999865 699999998754321100 000111346666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.+++ +..-+.+...+.+.. ...+++|||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 56 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~ 130 (266)
T cd06651 56 QLLKNLQ----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLK-AYGALTESVTRKYTRQILEGMSYLHSNMIVHR 130 (266)
T ss_pred HHHHHcC----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 6665553 222233334433222 33579999999999987643 122355555555444444 678899999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
|++|.||++. .+++.|||....+
T Consensus 131 ~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 131 DIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred CCCHHHEEECCCCCEEEccCCCcccc
Confidence 9999999965 5899999976443
No 486
>PHA02278 thioredoxin-like protein
Probab=98.45 E-value=5.7e-08 Score=96.50 Aligned_cols=72 Identities=7% Similarity=0.076 Sum_probs=49.9
Q ss_pred cccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec-----ccCccccccCCccccccccc
Q psy12972 754 NFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD-----LFGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 754 nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~-----~~~~~~~i~g~~~~~~~~~~ 827 (1578)
+|...+ +++++++|.|||||||+|+.++|.++++++.+... .+..++++.+ .++....+.
T Consensus 6 ~~~~~i---~~~~~vvV~F~A~WCgpCk~m~p~l~~l~~~~~~~~~~~~vdvd~~~~d~~~l~~~~~I~----------- 71 (103)
T PHA02278 6 DLNTAI---RQKKDVIVMITQDNCGKCEILKSVIPMFQESGDIKKPILTLNLDAEDVDREKAVKLFDIM----------- 71 (103)
T ss_pred HHHHHH---hCCCcEEEEEECCCCHHHHhHHHHHHHHHhhhcCCceEEEEECCccccccHHHHHHCCCc-----------
Confidence 445555 36889999999999999999999999999886543 3444444322 133333333
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
..||+.+|++|-
T Consensus 72 --~iPT~i~fk~G~ 83 (103)
T PHA02278 72 --STPVLIGYKDGQ 83 (103)
T ss_pred --cccEEEEEECCE
Confidence 349998888764
No 487
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.45 E-value=5e-07 Score=105.72 Aligned_cols=137 Identities=13% Similarity=0.167 Sum_probs=85.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+.+...... +. -.+.+|+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~---~~---------------------------------~~~~~e~ 50 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES---KF---------------------------------NQIIMEL 50 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH---HH---------------------------------HHHHHHH
Confidence 46899999999999976 89999999875322110 00 0123333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHH-cCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQ-TGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~-~G~v 562 (1578)
..+.++. +..-+.+...+. .....+|||||++|.++..+.... ...++...+...+.+++ +..+|. .|++
T Consensus 51 ~~l~~~~----~~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~ 125 (286)
T cd06622 51 DILHKAV----SPYIVDFYGAFF-IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNII 125 (286)
T ss_pred HHHHhcC----CCcHHhhhhhee-cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEe
Confidence 3333322 111111111111 123457999999999997653211 12566655555555544 567775 6999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.||++. .++++|||....
T Consensus 126 H~dl~p~nil~~~~~~~~l~dfg~~~~ 152 (286)
T cd06622 126 HRDVKPTNVLVNGNGQVKLCDFGVSGN 152 (286)
T ss_pred eCCCCHHHEEECCCCCEEEeecCCccc
Confidence 999999999975 589999997644
No 488
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.45 E-value=7.2e-07 Score=101.78 Aligned_cols=134 Identities=19% Similarity=0.160 Sum_probs=88.0
Q ss_pred cccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 411 IAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 411 lasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
||.|++|+||+|+.. +|+.||||+.+......- .....+..|...
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------------------------------~~~~~~~~e~~~ 46 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR----------------------------------KEVEHTLTERNI 46 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch----------------------------------HHHHHHHHHHHH
Confidence 689999999999975 699999998865432110 001123344444
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
++++. + + .++.++..+ ....++||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 47 l~~l~----h-~--~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~ 118 (250)
T cd05123 47 LSRIN----H-P--FIVKLHYAFQTEEKLYLVLEYAPGGELFSHLS-KEGRFSEERARFYAAEIVLALEYLHSLGIIYRD 118 (250)
T ss_pred HHHcC----C-C--cHHHHHHHeecCCeeEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 43332 1 1 122222222 234579999999999877643 122466666666655555 7789999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 119 l~p~ni~~~~~~~~~l~d~~~~~~ 142 (250)
T cd05123 119 LKPENILLDADGHIKLTDFGLAKE 142 (250)
T ss_pred CCcceEEEcCCCcEEEeecCccee
Confidence 999999965 589999997643
No 489
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.45 E-value=5.9e-07 Score=113.14 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=49.6
Q ss_pred CceEEEEeccCCCcCCchhhHhh-----------------------cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCC
Q psy12972 514 STRVLTTEFIDGVKISDKEGLLE-----------------------KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHS 568 (1578)
Q Consensus 514 t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHP 568 (1578)
...+|||||++|.+|.++..-.. ...+...+...+.++. +..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 34689999999999987643110 0112222333333333 6789999999999999
Q ss_pred CCCCCC---eeEEecCCchh
Q psy12972 569 GNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 569 GNilv~---~v~liDfG~~~ 585 (1578)
.|||+. .++++|||...
T Consensus 338 ~NILl~~~~~~kL~DFGla~ 357 (507)
T PLN03224 338 ENLLVTVDGQVKIIDFGAAV 357 (507)
T ss_pred HhEEECCCCcEEEEeCcCcc
Confidence 999965 58999999763
No 490
>KOG0913|consensus
Probab=98.45 E-value=6.1e-08 Score=105.78 Aligned_cols=101 Identities=23% Similarity=0.360 Sum_probs=91.5
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
.+..++.+|+...+ .+-|+++|+||||+.|+.+.|.|+..|.--.+.+|.+++||.+.++.|..+|-|.. .|||
T Consensus 25 ~~~~~~eenw~~~l-----~gewmi~~~ap~~psc~~~~~~~~~~a~~s~dL~v~va~VDvt~npgLsGRF~vta-LptI 98 (248)
T KOG0913|consen 25 KLTRIDEENWKELL-----TGEWMIEFGAPWCPSCSDLIPHLENFATVSLDLGVKVAKVDVTTNPGLSGRFLVTA-LPTI 98 (248)
T ss_pred eeEEecccchhhhh-----chHHHHHhcCCCCccccchHHHHhccCCccCCCceeEEEEEEEeccccceeeEEEe-cceE
Confidence 45678999999976 67799999999999999999999999998888899999999999999999999997 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
.-.++|....| .|.|+.+++++|+..+
T Consensus 99 YHvkDGeFrry-sgaRdk~dfisf~~~r 125 (248)
T KOG0913|consen 99 YHVKDGEFRRY-SGARDKNDFISFEEHR 125 (248)
T ss_pred EEeeccccccc-cCcccchhHHHHHHhh
Confidence 99999976655 5999999999999643
No 491
>KOG2270|consensus
Probab=98.45 E-value=7.7e-07 Score=103.47 Aligned_cols=157 Identities=20% Similarity=0.221 Sum_probs=108.4
Q ss_pred hhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHh--hhC----CCCCHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAG--FLY----PKFDFQWVINELK 474 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~--~~~----~~~~~~~~~~e~~ 474 (1578)
.++.+++ -.|..|--|-||.|+-.+|..+||||-+..|--.-.+| +.+. +-| -..+...++.-|+
T Consensus 143 G~i~~in-GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRd--------RYV~GEfRFRhgyck~NPRKMVk~WA 213 (520)
T KOG2270|consen 143 GVIVEIN-GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRD--------RYVSGEFRFRHGYCKHNPRKMVKTWA 213 (520)
T ss_pred Ceeeecc-cccccCccceeEeeecCCCceEEEEEEeeeEEEEechh--------hhccceeeeecccccCCcHHHHHHHH
Confidence 3455664 47899999999999999999999999987664433333 2211 111 1235567788777
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHH---HHHHHHHH
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLAD---VDRKLFTA 551 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~---v~~~l~~~ 551 (1578)
..|.+|+.|++.. +|.+|+|+ +-..+||||+|+- ..-.-...|....+++.+ +...++..
T Consensus 214 ---------EKE~RNLkRl~~a-----GIP~PePI--lLk~hVLVM~FlG-rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~ 276 (520)
T KOG2270|consen 214 ---------EKEMRNLKRLNNA-----GIPCPEPI--LLKNHVLVMEFLG-RDGWAAPKLKDASLSTSKARELYQQCVRI 276 (520)
T ss_pred ---------HHHHHHHHHHHhc-----CCCCCCce--eeecceEeeeecc-CCCCcCcccccccCChHHHHHHHHHHHHH
Confidence 6899999999853 57888888 6678999999993 221112224445555433 33344444
Q ss_pred HHHHHHHcCccccCCCCCCCC--CCeeEEecCCc
Q psy12972 552 FAEQIFQTGFVHADPHSGNDV--NTWLYPVDLGD 583 (1578)
Q Consensus 552 ~l~~i~~~G~vH~DpHPGNil--v~~v~liDfG~ 583 (1578)
.=.+....++|||||.--|+| .+.+++||-+-
T Consensus 277 MR~lY~~c~LVHADLSEfN~LyhdG~lyiIDVSQ 310 (520)
T KOG2270|consen 277 MRRLYQKCRLVHADLSEFNLLYHDGKLYIIDVSQ 310 (520)
T ss_pred HHHHHHHhceeccchhhhhheEECCEEEEEEccc
Confidence 444556899999999999999 46799999773
No 492
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.44 E-value=6.1e-07 Score=108.55 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||+|++|.||+|.. .+|+.||||+......... .+..+.+|+
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~Ei 67 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII-----------------------------------HAKRTYREL 67 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhH-----------------------------------HHHHHHHHH
Confidence 6899999999999985 5899999998864321100 011234466
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-----CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-----DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-----~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
..+.+++ +...+.+..++. ......+++|++. |..+.++. ....++...+...+.+++ +..+|..|
T Consensus 68 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 68 RLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred HHHHHcC----CCcccceeeeeeecccccccccEEEEehhc-ccCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6666553 222233333321 1113357889987 66776653 334566666555555544 68899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~ 168 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLAR 168 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccc
Confidence 99999999999965 58999999754
No 493
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=98.44 E-value=8.1e-07 Score=101.72 Aligned_cols=138 Identities=12% Similarity=0.050 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|... +++.||||+....--. ....-.+.+|+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------------------------------~~~~~~~~~e~ 50 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-----------------------------------KDERLAAQNEC 50 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc-----------------------------------cHHHHHHHHHH
Confidence 67999999999999864 7899999987532100 00011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.++++. +..-+.+...+ ......+|||||++|.+|.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~~~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~ 125 (256)
T cd08220 51 QVLKLLS----HPNIIEYYENF-LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHR 125 (256)
T ss_pred HHHhhCC----CCchhheeeeE-ecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 6555553 21112222222 1234568999999999998875322 12356666666555554 678899999999
Q ss_pred CCCCCCCCCC----eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
|++|+||++. .+++.|||....
T Consensus 126 dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 126 DLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred CCCHHHEEEcCCCCEEEEccCCCcee
Confidence 9999999975 368899997644
No 494
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.44 E-value=6.1e-07 Score=105.97 Aligned_cols=139 Identities=19% Similarity=0.202 Sum_probs=89.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|+.. +|+.||||+........ .. ...+.+|+
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--------------------~~---------------~~~~~~e~ 62 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE--------------------GF---------------PITALREI 62 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC--------------------Cc---------------hhHHHHHH
Confidence 67999999999999965 79999999764321100 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC-------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD-------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~-------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.++++. +...+.+..++.. ..+..+|||||+.| .+.+...-....++...+...+.+++ +..+|.
T Consensus 63 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 137 (310)
T cd07865 63 KILQLLK----HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137 (310)
T ss_pred HHHHhCC----CCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555443 2223333333221 22345899999976 44443221222567777766666665 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.|++|+|++|.||+++ .+++.|||....+
T Consensus 138 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 138 NKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 9999999999999976 4888999976433
No 495
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.44 E-value=5.5e-07 Score=105.10 Aligned_cols=137 Identities=17% Similarity=0.164 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|+.|+||+|+.+ +|+.||||+........ ... -++.+|.
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~~~------~~~~~E~ 49 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-----------------------------GVP------STAIREI 49 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-----------------------------cch------hHHHHHH
Confidence 56899999999999965 89999999876432110 000 0123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..++++. +..-+.+...+.+ ....+++|||++| ++.+...... ..++...+...+.+++ +..+|..|++|+
T Consensus 50 ~~l~~l~----~~~iv~~~~~~~~-~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~ 123 (283)
T cd07835 50 SLLKELN----HPNIVRLLDVVHS-ENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHR 123 (283)
T ss_pred HHHHhcC----CCCccCHhheecc-CCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCC
Confidence 4444443 2222333333322 2456899999964 6665532111 2466666666555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|+||++. .+++.|||....
T Consensus 124 dl~p~nil~~~~~~~~l~df~~~~~ 148 (283)
T cd07835 124 DLKPQNLLIDREGALKLADFGLARA 148 (283)
T ss_pred CCCHHHEEEcCCCcEEEeecccccc
Confidence 9999999975 589999997643
No 496
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.44 E-value=4.3e-07 Score=106.06 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|+.. +|+.||||+.+...... + .+-.+.+|+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~------~~~~~~~E~ 50 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------G------VPSTAIREI 50 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc-----------------------------c------cchHHHHHH
Confidence 67999999999999865 79999999875322100 0 001234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+-..+. .....++||||+.| .+.+..... ...++...+...+.+++ +..+|..|++|+
T Consensus 51 ~~l~~l~----h~~i~~~~~~~~-~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~ 124 (284)
T cd07860 51 SLLKELN----HPNIVKLLDVIH-TENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 124 (284)
T ss_pred HHHHhcC----CCCCcchhhhcc-cCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5555553 222222222222 23456899999965 555543221 23456666666655555 688999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+||++. .+++.|||...
T Consensus 125 ~l~p~nill~~~~~~~l~dfg~~~ 148 (284)
T cd07860 125 DLKPQNLLINTEGAIKLADFGLAR 148 (284)
T ss_pred CCCHHHEEECCCCCEEEeeccchh
Confidence 9999999965 58999999754
No 497
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=98.44 E-value=5.4e-08 Score=98.48 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=55.2
Q ss_pred cccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeec--ccCccccccCCccccccccc
Q psy12972 750 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYD--LFGTTDGFSGQDSASRNFHN 827 (1578)
Q Consensus 750 l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~--~~~~~~~i~g~~~~~~~~~~ 827 (1578)
+++.+|.+.+...+.+++++|.||||||++|+.+.|.++++|+.+.+.. ++.++.+ .+++..+
T Consensus 9 i~~~~f~~~i~~~~~~~~vvv~F~a~~c~~C~~l~~~l~~la~~~~~v~--f~~vd~~~~~l~~~~~------------- 73 (113)
T cd02957 9 ISSKEFLEEVTKASKGTRVVVHFYEPGFPRCKILDSHLEELAAKYPETK--FVKINAEKAFLVNYLD------------- 73 (113)
T ss_pred EcHHHHHHHHHccCCCCEEEEEEeCCCCCcHHHHHHHHHHHHHHCCCcE--EEEEEchhhHHHHhcC-------------
Confidence 4556788888654456899999999999999999999999999987543 3333333 2333333
Q ss_pred cccCcccccccccc
Q psy12972 828 HMYNPFDDVFSEGF 841 (1578)
Q Consensus 828 i~~~Ptiklf~~~~ 841 (1578)
+...||+.+|.+|-
T Consensus 74 i~~~Pt~~~f~~G~ 87 (113)
T cd02957 74 IKVLPTLLVYKNGE 87 (113)
T ss_pred CCcCCEEEEEECCE
Confidence 33449998888664
No 498
>KOG0598|consensus
Probab=98.44 E-value=5.5e-07 Score=104.90 Aligned_cols=134 Identities=19% Similarity=0.164 Sum_probs=84.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+-||-||+|+|+..+-+ +|+-.|+||.+... +++. .+ .+.+ ..|.
T Consensus 31 kviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~----------------iv~~-----------~e-~~~~------~~Er 76 (357)
T KOG0598|consen 31 KVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK----------------IVEK-----------KE-VRHT------KAER 76 (357)
T ss_pred eeeeccCCceEEEEEEcccCceeehhhhhhhH----------------hhhh-----------hh-HHHH------HHHH
Confidence 68999999999999865 68999999885321 1110 00 0111 2233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHH-HHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDR-KLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~-~l~~~~--l~~i~~~G~vH 563 (1578)
.-+.++ ++| ..|.-.|.--+ ++-+||+||+.|+.|--. +.+.|.=.+..++ -+.++. +..+|..|+||
T Consensus 77 ~IL~~v-----~hP-Fiv~l~ysFQt~~kLylVld~~~GGeLf~h--L~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 77 NILSKI-----KHP-FIVKLIYSFQTEEKLYLVLDYLNGGELFYH--LQREGRFSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHhC-----CCC-cEeeeEEecccCCeEEEEEeccCCccHHHH--HHhcCCcchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 333332 223 33444443333 345899999999888543 3433332333333 334433 78999999999
Q ss_pred cCCCCCCCCCC---eeEEecCCch
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~ 584 (1578)
||+||.|||++ .+++.|||..
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~ 172 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLC 172 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccc
Confidence 99999999954 4788888864
No 499
>cd02954 DIM1 Dim1 family; Dim1 is also referred to as U5 small nuclear ribonucleoprotein particle (snRNP)-specific 15kD protein. It is a component of U5 snRNP, which pre-assembles with U4/U6 snRNPs to form a [U4/U6:U5] tri-snRNP complex required for pre-mRNA splicing. Dim1 interacts with multiple splicing-associated proteins, suggesting that it functions at multiple control points in the splicing of pre-mRNA as part of a large spliceosomal complex involving many protein-protein interactions. U5 snRNP contains seven core proteins (common to all snRNPs) and nine U5-specific proteins, one of which is Dim1. Dim1 adopts a thioredoxin fold but does not contain the redox active CXXC motif. It is essential for G2/M phase transition, as a consequence to its role in pre-mRNA splicing.
Probab=98.43 E-value=9.2e-08 Score=96.07 Aligned_cols=73 Identities=18% Similarity=0.330 Sum_probs=52.3
Q ss_pred ccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccccC
Q psy12972 755 FEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 755 f~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
|+..+. .+++++++|.|||+|||+|+.++|.++++|+++.+. +.++.++.+. ++...++.+-
T Consensus 5 ~~~~i~-~~~~~~vVV~F~A~WCgpCk~m~P~le~la~~~~~~-v~f~kVDvD~~~~la~~~~V~~i------------- 69 (114)
T cd02954 5 VDQAIL-SEEEKVVVIRFGRDWDPVCMQMDEVLAKIAEDVSNF-AVIYLVDIDEVPDFNKMYELYDP------------- 69 (114)
T ss_pred HHHHHh-ccCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHcCCCCC-------------
Confidence 344442 246789999999999999999999999999999765 3444555444 3344444443
Q ss_pred ccccccccccc
Q psy12972 832 PFDDVFSEGFN 842 (1578)
Q Consensus 832 Ptiklf~~~~~ 842 (1578)
||+.+|++|-.
T Consensus 70 PTf~~fk~G~~ 80 (114)
T cd02954 70 PTVMFFFRNKH 80 (114)
T ss_pred CEEEEEECCEE
Confidence 99989987643
No 500
>cd03005 PDI_a_ERp46 PDIa family, endoplasmic reticulum protein 46 (ERp46) subfamily; ERp46 is an ER-resident protein containing three redox active TRX domains. Yeast complementation studies show that ERp46 can substitute for protein disulfide isomerase (PDI) function in vivo. It has been detected in many tissues, however, transcript and protein levels do not correlate in all tissues, suggesting regulation at a posttranscriptional level. An identical protein, named endoPDI, has been identified as an endothelial PDI that is highly expressed in the endothelium of tumors and hypoxic lesions. It has a protective effect on cells exposed to hypoxia.
Probab=98.43 E-value=7e-08 Score=95.13 Aligned_cols=76 Identities=20% Similarity=0.357 Sum_probs=52.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.++..+|+..+.+ ++++|.||||||++|++++|.|+++|+.+++. .+.+..++++. .|+..+
T Consensus 4 ~l~~~~f~~~~~~----~~~lv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~--------- 70 (102)
T cd03005 4 ELTEDNFDHHIAE----GNHFVKFFAPWCGHCKRLAPTWEQLAKKFNNENPSVKIAKVDCTQHRELCSEFQ--------- 70 (102)
T ss_pred ECCHHHHHHHhhc----CCEEEEEECCCCHHHHHhCHHHHHHHHHHhccCCcEEEEEEECCCChhhHhhcC---------
Confidence 4566678888732 35999999999999999999999999999872 33333332221 333333
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
+...|++.+|..+.
T Consensus 71 ----v~~~Pt~~~~~~g~ 84 (102)
T cd03005 71 ----VRGYPTLLLFKDGE 84 (102)
T ss_pred ----CCcCCEEEEEeCCC
Confidence 34458888887653
Done!