Query psy12972
Match_columns 1578
No_of_seqs 1109 out of 8268
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 15:52:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 7.4E-43 2.5E-47 461.7 31.6 523 633-1203 17-768 (780)
2 3us3_A Calsequestrin-1; calciu 100.0 6.4E-32 2.2E-36 326.2 25.9 321 855-1206 15-352 (367)
3 1sji_A Calsequestrin 2, calseq 100.0 1.4E-30 4.9E-35 312.4 28.8 318 855-1205 13-349 (350)
4 2r2j_A Thioredoxin domain-cont 100.0 9.5E-30 3.2E-34 308.9 22.9 329 855-1225 7-344 (382)
5 3f8u_A Protein disulfide-isome 100.0 1.3E-28 4.6E-33 307.7 28.1 395 855-1367 3-414 (481)
6 3apq_A DNAJ homolog subfamily 100.0 1.3E-29 4.6E-34 282.0 13.3 204 637-967 2-206 (210)
7 2b5e_A Protein disulfide-isome 99.9 3.4E-27 1.1E-31 296.8 22.5 316 855-1206 16-344 (504)
8 3apo_A DNAJ homolog subfamily 99.9 5.7E-25 1.9E-29 290.8 17.5 296 749-1073 444-765 (780)
9 3idv_A Protein disulfide-isome 99.9 1.8E-24 6E-29 244.5 8.1 197 748-965 18-239 (241)
10 3ed3_A Protein disulfide-isome 99.9 1.6E-22 5.5E-27 237.0 18.3 226 855-1088 19-282 (298)
11 3f8u_A Protein disulfide-isome 99.9 5.6E-22 1.9E-26 247.7 24.2 404 748-1206 4-465 (481)
12 3us3_A Calsequestrin-1; calciu 99.8 2.7E-20 9.4E-25 224.6 16.6 296 747-1073 15-346 (367)
13 1a8l_A Protein disulfide oxido 99.8 8.6E-22 3E-26 220.7 3.3 182 764-962 21-225 (226)
14 1sji_A Calsequestrin 2, calseq 99.8 6.1E-20 2.1E-24 220.1 18.0 294 747-1073 13-344 (350)
15 2ywm_A Glutaredoxin-like prote 99.8 2.7E-20 9.2E-25 209.3 5.0 176 765-962 20-219 (229)
16 3uem_A Protein disulfide-isome 99.8 3.6E-20 1.2E-24 222.7 5.8 195 751-963 123-357 (361)
17 2y7j_A Phosphorylase B kinase 99.8 3.2E-19 1.1E-23 214.9 11.0 225 283-587 14-250 (365)
18 2b5e_A Protein disulfide-isome 99.8 1.1E-18 3.9E-23 219.2 16.3 397 747-1206 16-471 (504)
19 3idv_A Protein disulfide-isome 99.8 2.5E-18 8.4E-23 194.1 17.0 205 855-1075 17-237 (241)
20 2r2j_A Thioredoxin domain-cont 99.8 1.2E-18 4.3E-23 211.2 15.4 289 747-1073 7-327 (382)
21 3q6o_A Sulfhydryl oxidase 1; p 99.7 2.3E-17 7.8E-22 187.5 17.9 184 855-1048 14-215 (244)
22 2hls_A Protein disulfide oxido 99.7 9.6E-18 3.3E-22 190.8 5.7 179 764-964 24-227 (243)
23 3t58_A Sulfhydryl oxidase 1; o 99.7 2.3E-16 7.7E-21 197.5 16.3 186 855-1049 14-216 (519)
24 3uem_A Protein disulfide-isome 99.6 6E-16 2.1E-20 185.9 15.8 279 764-1074 34-356 (361)
25 3zzx_A Thioredoxin; oxidoreduc 99.6 8.5E-16 2.9E-20 151.7 7.3 98 859-961 7-104 (105)
26 1bq0_A DNAJ, HSP40; chaperone, 99.6 6E-16 2E-20 152.2 5.6 71 636-706 2-73 (103)
27 3h79_A Thioredoxin-like protei 99.6 2.3E-15 7.8E-20 153.1 9.4 104 855-961 17-126 (127)
28 2ctp_A DNAJ homolog subfamily 99.6 1.8E-15 6.2E-20 141.1 6.9 73 633-705 3-75 (78)
29 1hdj_A Human HSP40, HDJ-1; mol 99.6 2.4E-15 8.2E-20 139.9 7.2 69 637-705 3-71 (77)
30 3ec3_A Protein disulfide-isome 99.6 6.8E-14 2.3E-18 159.7 20.0 225 962-1224 4-242 (250)
31 2ctr_A DNAJ homolog subfamily 99.5 1.7E-15 5.7E-20 144.6 4.4 73 633-705 3-75 (88)
32 2h8l_A Protein disulfide-isome 99.5 8.1E-14 2.8E-18 159.2 18.9 217 961-1206 3-234 (252)
33 2ywm_A Glutaredoxin-like prote 99.5 3.7E-14 1.3E-18 159.1 15.6 186 873-1072 20-217 (229)
34 2dn9_A DNAJ homolog subfamily 99.5 4.2E-15 1.4E-19 138.9 6.3 73 633-705 3-76 (79)
35 2qsi_A Putative hydrogenase ex 99.5 5.2E-15 1.8E-19 151.7 6.8 103 856-962 18-122 (137)
36 2cug_A Mkiaa0962 protein; DNAJ 99.5 4.8E-15 1.6E-19 141.5 6.0 72 634-705 14-85 (88)
37 1a8l_A Protein disulfide oxido 99.5 2.6E-14 8.8E-19 159.9 12.4 187 872-1072 21-223 (226)
38 2voc_A Thioredoxin; electron t 99.5 1.7E-14 5.8E-19 143.3 9.5 105 855-965 3-107 (112)
39 2ej7_A HCG3 gene; HCG3 protein 99.5 8.2E-15 2.8E-19 138.0 6.3 73 633-705 5-79 (82)
40 2dmx_A DNAJ homolog subfamily 99.5 8.8E-15 3E-19 140.9 5.8 73 633-705 5-79 (92)
41 3gnj_A Thioredoxin domain prot 99.5 1.4E-14 4.9E-19 142.7 7.4 104 855-962 6-109 (111)
42 2qgv_A Hydrogenase-1 operon pr 99.5 6.8E-15 2.3E-19 151.3 4.2 103 857-963 21-125 (140)
43 2trx_A Thioredoxin; electron t 99.5 3.3E-14 1.1E-18 139.5 8.8 104 855-962 4-107 (108)
44 1x5d_A Protein disulfide-isome 99.5 2.6E-14 8.9E-19 145.7 8.3 104 855-962 9-116 (133)
45 1mek_A Protein disulfide isome 99.5 3E-14 1E-18 142.0 8.4 107 855-965 9-119 (120)
46 4f9z_D Endoplasmic reticulum r 99.5 5.1E-13 1.8E-17 150.1 19.5 211 966-1204 11-227 (227)
47 3die_A Thioredoxin, TRX; elect 99.5 4.3E-14 1.5E-18 137.9 8.9 102 855-962 5-106 (106)
48 4euy_A Uncharacterized protein 99.5 2.8E-14 9.5E-19 140.0 7.6 98 859-962 7-104 (105)
49 2och_A Hypothetical protein DN 99.5 1.9E-14 6.6E-19 132.3 5.9 66 636-703 7-72 (73)
50 3ed3_A Protein disulfide-isome 99.5 8.2E-15 2.8E-19 171.6 4.2 202 747-972 19-277 (298)
51 3uvt_A Thioredoxin domain-cont 99.5 4.1E-14 1.4E-18 139.2 8.5 102 855-961 7-110 (111)
52 3c4z_A Rhodopsin kinase; Ser/T 99.5 4E-14 1.4E-18 178.7 10.4 224 309-586 73-338 (543)
53 2dj1_A Protein disulfide-isome 99.5 4.5E-14 1.5E-18 145.6 8.8 106 855-965 19-126 (140)
54 2i4a_A Thioredoxin; acidophIle 99.5 6E-14 2E-18 137.1 9.2 103 855-961 4-106 (107)
55 2dml_A Protein disulfide-isome 99.5 7.8E-14 2.7E-18 141.9 10.4 104 855-962 19-123 (130)
56 3tco_A Thioredoxin (TRXA-1); d 99.5 3.8E-14 1.3E-18 138.8 7.6 103 855-962 6-108 (109)
57 3ga4_A Dolichyl-diphosphooligo 99.5 5.7E-14 1.9E-18 150.8 9.5 108 855-965 20-155 (178)
58 3qou_A Protein YBBN; thioredox 99.5 4.8E-14 1.6E-18 163.7 9.7 107 855-964 9-115 (287)
59 1t00_A Thioredoxin, TRX; redox 99.5 5E-14 1.7E-18 139.3 8.3 105 855-963 7-111 (112)
60 1thx_A Thioredoxin, thioredoxi 99.5 7.3E-14 2.5E-18 138.3 9.4 105 855-963 9-113 (115)
61 1nsw_A Thioredoxin, TRX; therm 99.5 5.1E-14 1.8E-18 137.4 8.2 103 855-962 2-104 (105)
62 2av4_A Thioredoxin-like protei 99.5 2.8E-14 9.6E-19 148.4 6.5 101 859-962 28-138 (160)
63 3hz4_A Thioredoxin; NYSGXRC, P 99.5 4.3E-14 1.5E-18 146.4 7.8 106 855-964 8-113 (140)
64 1x5e_A Thioredoxin domain cont 99.5 6.1E-14 2.1E-18 142.1 8.3 103 855-964 9-111 (126)
65 1dby_A Chloroplast thioredoxin 99.5 7.2E-14 2.5E-18 136.8 8.5 104 855-962 3-106 (107)
66 2yua_A Williams-beuren syndrom 99.5 1.8E-14 6.2E-19 140.5 4.1 71 634-704 14-85 (99)
67 2lgw_A DNAJ homolog subfamily 99.5 2E-14 6.9E-19 139.9 4.3 69 637-705 2-72 (99)
68 1wjz_A 1700030A21RIK protein; 99.5 3.1E-14 1.1E-18 137.6 5.6 71 634-704 13-90 (94)
69 3lz8_A Putative chaperone DNAJ 99.5 5.1E-15 1.7E-19 174.1 0.0 102 633-735 24-127 (329)
70 3qfa_C Thioredoxin; protein-pr 99.5 4.5E-14 1.5E-18 141.4 6.8 101 857-962 16-116 (116)
71 2o8v_B Thioredoxin 1; disulfid 99.5 7.3E-14 2.5E-18 142.6 8.4 104 855-962 24-127 (128)
72 1w4v_A Thioredoxin, mitochondr 99.5 8.1E-14 2.8E-18 140.1 8.3 104 855-962 15-118 (119)
73 2ppt_A Thioredoxin-2; thiredox 99.5 7.7E-14 2.6E-18 147.5 8.4 105 855-964 49-153 (155)
74 2yzu_A Thioredoxin; redox prot 99.4 7.4E-14 2.5E-18 136.6 7.5 105 855-964 3-107 (109)
75 1fb6_A Thioredoxin M; electron 99.4 1.1E-13 3.7E-18 134.8 8.5 102 856-961 3-104 (105)
76 2ctq_A DNAJ homolog subfamily 99.4 3.2E-14 1.1E-18 141.9 4.7 73 633-705 16-89 (112)
77 4gyi_A RIO2 kinase; protein ki 99.4 1.3E-13 4.6E-18 165.4 10.9 147 409-582 101-260 (397)
78 2l5l_A Thioredoxin; structural 99.4 1.2E-13 4.2E-18 142.2 9.2 107 855-964 11-127 (136)
79 2e0q_A Thioredoxin; electron t 99.4 7.4E-14 2.5E-18 135.2 7.0 102 856-963 2-103 (104)
80 2ctw_A DNAJ homolog subfamily 99.4 6E-14 2E-18 139.2 6.3 72 633-704 13-85 (109)
81 3p2a_A Thioredoxin 2, putative 99.4 1.3E-13 4.6E-18 143.9 8.9 105 854-963 39-143 (148)
82 3d6i_A Monothiol glutaredoxin- 99.4 1.3E-13 4.4E-18 136.5 8.1 106 855-962 2-108 (112)
83 2i1u_A Thioredoxin, TRX, MPT46 99.4 1.4E-13 4.8E-18 137.9 8.2 106 855-964 14-119 (121)
84 2djj_A PDI, protein disulfide- 99.4 3.2E-13 1.1E-17 135.4 10.3 104 855-964 9-118 (121)
85 3hxs_A Thioredoxin, TRXP; elec 99.4 1.9E-13 6.6E-18 141.1 9.0 106 855-963 24-139 (141)
86 1oaz_A Thioredoxin 1; immune s 99.4 1.2E-13 4E-18 140.2 6.6 104 855-962 5-122 (123)
87 2dj0_A Thioredoxin-related tra 99.4 3.4E-14 1.2E-18 146.5 2.4 105 855-961 9-119 (137)
88 2dj3_A Protein disulfide-isome 99.4 2E-13 7E-18 139.3 7.6 107 855-964 9-119 (133)
89 2o37_A Protein SIS1; HSP40, J- 99.4 3.9E-14 1.3E-18 136.2 2.1 67 636-704 7-73 (92)
90 3aps_A DNAJ homolog subfamily 99.4 1.6E-13 5.4E-18 138.0 6.6 104 856-963 6-113 (122)
91 3f3q_A Thioredoxin-1; His TAG, 99.4 2.5E-13 8.4E-18 134.4 7.7 98 857-961 11-108 (109)
92 4b9d_A Serine/threonine-protei 99.4 4.9E-13 1.7E-17 159.4 11.6 137 409-585 30-173 (350)
93 1r26_A Thioredoxin; redox-acti 99.4 1.9E-13 6.6E-18 139.0 7.0 102 855-963 21-123 (125)
94 4fih_A Serine/threonine-protei 99.4 3.6E-13 1.2E-17 160.2 10.4 142 399-586 72-219 (346)
95 1gh2_A Thioredoxin-like protei 99.4 2.9E-13 9.8E-18 132.9 7.8 99 859-962 8-106 (107)
96 3dxb_A Thioredoxin N-terminall 99.4 3.4E-13 1.2E-17 151.0 9.4 105 856-964 15-119 (222)
97 1zth_A RIO1 serine protein kin 99.4 6.6E-13 2.3E-17 152.1 11.8 155 409-584 53-216 (258)
98 1xwb_A Thioredoxin; dimerizati 99.4 3.7E-13 1.3E-17 131.2 8.3 102 856-961 3-105 (106)
99 3ul3_B Thioredoxin, thioredoxi 99.4 3.3E-13 1.1E-17 137.3 8.2 88 871-960 40-127 (128)
100 3fpq_A Serine/threonine-protei 99.4 3.3E-13 1.1E-17 157.2 9.2 150 395-585 19-180 (290)
101 2c30_A Serine/threonine-protei 99.4 4.6E-13 1.6E-17 158.1 10.5 157 384-585 27-189 (321)
102 3m9j_A Thioredoxin; oxidoreduc 99.4 3.3E-13 1.1E-17 131.5 7.3 99 859-962 7-105 (105)
103 4fie_A Serine/threonine-protei 99.4 6.9E-13 2.4E-17 161.7 11.5 142 399-586 149-296 (423)
104 2xc2_A Thioredoxinn; oxidoredu 99.4 4.1E-13 1.4E-17 134.1 7.9 102 855-962 15-117 (117)
105 1ep7_A Thioredoxin CH1, H-type 99.4 3.5E-13 1.2E-17 133.0 7.2 104 856-962 5-110 (112)
106 2pu9_C TRX-F, thioredoxin F-ty 99.4 6.7E-13 2.3E-17 131.2 9.2 102 855-961 7-109 (111)
107 2qsa_A DNAJ homolog DNJ-2; J-d 99.4 1.1E-13 3.8E-18 137.4 3.6 70 635-704 13-87 (109)
108 2l6c_A Thioredoxin; oxidoreduc 99.4 3.8E-13 1.3E-17 133.3 7.3 101 857-964 7-107 (110)
109 2wz9_A Glutaredoxin-3; protein 99.4 4.4E-13 1.5E-17 141.1 8.1 120 856-980 15-141 (153)
110 1v98_A Thioredoxin; oxidoreduc 99.4 6.2E-13 2.1E-17 137.4 8.9 104 855-963 35-138 (140)
111 2es7_A Q8ZP25_salty, putative 99.4 3.5E-13 1.2E-17 140.4 6.7 105 855-965 19-127 (142)
112 3evi_A Phosducin-like protein 99.4 4.8E-13 1.6E-17 134.8 7.2 99 856-960 6-111 (118)
113 2vlu_A Thioredoxin, thioredoxi 99.4 5.5E-13 1.9E-17 134.0 7.6 104 856-963 16-120 (122)
114 1syr_A Thioredoxin; SGPP, stru 99.4 4.7E-13 1.6E-17 132.7 6.6 100 856-962 12-111 (112)
115 4asz_A BDNF/NT-3 growth factor 99.4 1.1E-12 3.9E-17 153.4 10.9 137 409-587 19-178 (299)
116 3omv_A RAF proto-oncogene seri 99.4 1.2E-12 4E-17 153.7 10.7 134 409-585 42-180 (307)
117 3gix_A Thioredoxin-like protei 99.4 5.3E-13 1.8E-17 140.2 7.0 102 858-962 9-120 (149)
118 2vim_A Thioredoxin, TRX; thior 99.4 7.9E-13 2.7E-17 128.4 7.5 100 857-961 3-103 (104)
119 4g3f_A NF-kappa-beta-inducing 99.3 6.1E-13 2.1E-17 157.8 7.8 129 409-585 64-199 (336)
120 4aw0_A HPDK1, 3-phosphoinositi 99.3 2.1E-12 7.3E-17 151.4 11.6 138 409-586 38-181 (311)
121 4gt4_A Tyrosine-protein kinase 99.3 1.6E-12 5.5E-17 152.8 10.5 138 409-587 32-195 (308)
122 1faa_A Thioredoxin F; electron 99.3 1.5E-12 5.1E-17 131.4 8.7 103 855-962 20-123 (124)
123 2l57_A Uncharacterized protein 99.3 2E-12 6.8E-17 130.9 9.6 92 871-964 24-118 (126)
124 2ys8_A RAB-related GTP-binding 99.3 2.8E-13 9.5E-18 129.7 3.0 62 636-697 26-87 (90)
125 2j23_A Thioredoxin; immune pro 99.3 5.1E-13 1.7E-17 134.7 5.1 99 859-962 22-120 (121)
126 3emx_A Thioredoxin; structural 99.3 6.4E-13 2.2E-17 136.8 5.8 101 855-964 18-127 (135)
127 2c0g_A ERP29 homolog, windbeut 99.3 2.2E-12 7.4E-17 146.3 10.6 100 855-963 18-132 (248)
128 4aoj_A High affinity nerve gro 99.3 2.2E-12 7.5E-17 153.1 11.0 137 409-587 47-208 (329)
129 1xfl_A Thioredoxin H1; AT3G510 99.3 1.1E-12 3.7E-17 133.1 7.0 103 856-962 19-123 (124)
130 3hyh_A Carbon catabolite-derep 99.3 2.9E-12 1E-16 148.0 11.5 137 409-586 19-161 (275)
131 2yj7_A LPBCA thioredoxin; oxid 99.0 1.4E-13 4.8E-18 133.8 0.0 103 855-961 3-105 (106)
132 2oe3_A Thioredoxin-3; electron 99.3 1.5E-12 5E-17 130.1 7.0 93 861-960 21-113 (114)
133 3hmm_A TGF-beta receptor type- 99.3 1.8E-12 6.1E-17 152.2 8.6 132 409-585 9-156 (303)
134 3q6o_A Sulfhydryl oxidase 1; p 99.3 9.6E-13 3.3E-17 149.3 6.1 188 748-960 15-237 (244)
135 4g31_A Eukaryotic translation 99.3 3.7E-12 1.3E-16 149.1 10.2 137 409-587 11-168 (299)
136 1qgv_A Spliceosomal protein U5 99.3 1.7E-12 6E-17 135.0 6.6 101 859-962 10-120 (142)
137 1zma_A Bacterocin transport ac 99.3 8.6E-13 2.9E-17 132.1 4.0 98 857-959 16-117 (118)
138 1gh6_A Large T antigen; tumor 99.3 5E-13 1.7E-17 132.9 2.0 66 636-704 7-74 (114)
139 2l6l_A DNAJ homolog subfamily 99.3 1E-12 3.6E-17 138.8 3.8 72 633-704 6-84 (155)
140 2qc7_A ERP31, ERP28, endoplasm 99.3 4.2E-12 1.4E-16 143.4 8.9 100 855-962 7-118 (240)
141 1ti3_A Thioredoxin H, PTTRXH1; 99.3 2.4E-12 8.3E-17 127.0 6.1 103 856-962 7-111 (113)
142 3cxg_A Putative thioredoxin; m 99.3 3.4E-12 1.2E-16 131.1 7.3 104 854-963 21-129 (133)
143 2dbc_A PDCL2, unnamed protein 99.3 2.4E-12 8.1E-17 132.7 6.1 100 856-961 13-119 (135)
144 2pf4_E Small T antigen; PP2A, 99.3 3.9E-13 1.3E-17 142.5 -0.1 69 633-704 7-77 (174)
145 2vm1_A Thioredoxin, thioredoxi 99.3 3.5E-12 1.2E-16 126.9 6.8 105 856-964 9-115 (118)
146 3ubd_A Ribosomal protein S6 ki 99.3 1.1E-12 3.7E-17 153.7 2.7 137 409-586 30-175 (304)
147 4ase_A Vascular endothelial gr 99.3 1.1E-11 3.7E-16 148.5 11.1 138 409-586 70-234 (353)
148 1faf_A Large T antigen; J doma 99.3 1.4E-12 4.7E-17 121.6 2.5 63 634-699 8-72 (79)
149 3d22_A TRXH4, thioredoxin H-ty 99.2 2.5E-12 8.6E-17 132.5 4.7 101 859-963 31-132 (139)
150 1mqb_A Ephrin type-A receptor 99.2 1.5E-11 5E-16 145.9 11.6 161 385-586 16-196 (333)
151 2f51_A Thioredoxin; electron t 99.2 5.1E-12 1.7E-16 126.9 5.9 100 859-964 11-114 (118)
152 1zar_A RIO2 kinase; serine kin 99.2 2.1E-11 7.1E-16 141.6 11.7 142 409-584 96-239 (282)
153 4b99_A Mitogen-activated prote 99.2 1.8E-11 6.1E-16 149.0 11.0 138 409-587 60-208 (398)
154 2trc_P Phosducin, MEKA, PP33; 99.2 4.2E-12 1.4E-16 141.7 4.9 103 855-961 101-211 (217)
155 4f9c_A Cell division cycle 7-r 99.2 2.1E-11 7.3E-16 146.5 11.3 138 399-585 19-166 (361)
156 3byv_A Rhoptry kinase; malaria 99.2 1.1E-12 3.7E-17 158.4 -1.1 209 312-585 16-254 (377)
157 3hho_A CO-chaperone protein HS 99.2 5.2E-12 1.8E-16 135.5 4.2 68 635-702 2-77 (174)
158 1iur_A KIAA0730 protein; DNAJ 99.2 2.8E-12 9.7E-17 121.6 1.8 60 636-695 15-76 (88)
159 1fo5_A Thioredoxin; disulfide 99.2 3.1E-11 1.1E-15 112.7 8.3 83 874-962 3-85 (85)
160 2x4f_A Myosin light chain kina 99.2 3.5E-11 1.2E-15 145.2 11.0 146 399-586 85-238 (373)
161 2kuc_A Putative disulphide-iso 99.2 7.2E-12 2.5E-16 127.3 3.7 106 857-964 10-122 (130)
162 3qcp_A QSOX from trypanosoma b 99.2 9.6E-12 3.3E-16 152.1 4.9 107 855-964 25-140 (470)
163 1a0r_P Phosducin, MEKA, PP33; 99.2 1.5E-11 5.1E-16 139.3 5.9 103 855-961 114-224 (245)
164 1wmj_A Thioredoxin H-type; str 99.2 6.9E-12 2.4E-16 127.2 2.6 102 859-964 21-123 (130)
165 2hls_A Protein disulfide oxido 99.2 1.7E-10 5.7E-15 131.1 14.1 185 872-1073 24-224 (243)
166 3e7e_A HBUB1, BUB1A, mitotic c 99.2 4.5E-11 1.5E-15 143.4 9.7 137 409-587 71-233 (365)
167 3com_A Serine/threonine-protei 99.1 5.2E-11 1.8E-15 139.3 9.9 147 393-585 21-173 (314)
168 1fpo_A HSC20, chaperone protei 99.1 1E-11 3.5E-16 132.8 3.5 67 637-703 1-75 (171)
169 1nho_A Probable thioredoxin; b 99.1 4.4E-11 1.5E-15 111.7 7.4 82 875-962 3-84 (85)
170 3qd2_B Eukaryotic translation 99.1 6.8E-11 2.3E-15 138.9 10.6 71 516-586 136-213 (332)
171 2fwh_A Thiol:disulfide interch 99.1 3E-11 1E-15 124.0 6.6 102 859-964 18-129 (134)
172 3kn6_A Ribosomal protein S6 ki 99.1 1.3E-10 4.5E-15 137.3 13.0 133 407-585 15-157 (325)
173 2vuw_A Serine/threonine-protei 99.1 8.1E-11 2.8E-15 139.4 11.2 71 513-585 134-230 (336)
174 4hcu_A Tyrosine-protein kinase 99.1 8.8E-11 3E-15 134.2 11.1 134 409-585 16-154 (269)
175 1n4c_A Auxilin; four helix bun 99.1 1.2E-11 4.2E-16 131.8 3.6 62 637-698 117-182 (182)
176 4f9z_D Endoplasmic reticulum r 99.1 2.1E-10 7.1E-15 128.8 13.8 196 859-1072 16-222 (227)
177 3sxs_A Cytoplasmic tyrosine-pr 99.1 1.1E-10 3.7E-15 133.3 11.4 134 409-585 14-152 (268)
178 3t58_A Sulfhydryl oxidase 1; o 99.1 2.2E-11 7.4E-16 152.6 5.8 188 748-960 15-237 (519)
179 3gen_A Tyrosine-protein kinase 99.1 1.1E-10 3.6E-15 134.5 11.2 134 409-585 30-168 (283)
180 3fk8_A Disulphide isomerase; A 99.1 4.5E-11 1.5E-15 122.1 7.1 88 872-961 28-131 (133)
181 2zv2_A Calcium/calmodulin-depe 99.1 1.1E-10 3.8E-15 135.6 11.2 161 409-586 19-186 (298)
182 3fe3_A MAP/microtubule affinit 99.1 2E-10 6.7E-15 136.2 13.2 138 409-587 21-164 (328)
183 3v5w_A G-protein coupled recep 99.1 7.5E-11 2.6E-15 150.3 10.1 149 397-586 186-341 (689)
184 3kul_A Ephrin type-A receptor 99.1 1E-10 3.5E-15 138.3 10.6 136 409-585 55-199 (325)
185 2qwo_B Putative tyrosine-prote 99.1 1.2E-11 4.2E-16 117.6 2.1 55 637-691 33-91 (92)
186 2psq_A Fibroblast growth facto 99.1 4E-10 1.4E-14 135.8 15.6 137 409-586 87-252 (370)
187 2qol_A Ephrin receptor; recept 99.1 1.1E-10 3.6E-15 141.0 9.8 137 409-586 51-196 (373)
188 3bvo_A CO-chaperone protein HS 99.1 2.7E-11 9.1E-16 133.2 4.0 66 635-700 41-114 (207)
189 3cbl_A C-FES, proto-oncogene t 99.1 1E-10 3.5E-15 141.3 9.4 136 409-585 120-261 (377)
190 3ag7_A Putative uncharacterize 99.1 2.9E-11 9.9E-16 118.8 2.9 57 636-693 40-104 (106)
191 3txo_A PKC-L, NPKC-ETA, protei 99.1 4E-10 1.4E-14 135.1 13.4 137 409-585 29-172 (353)
192 2qkw_B Protein kinase; three-h 99.1 2.2E-10 7.7E-15 134.6 10.9 135 409-585 45-187 (321)
193 4eqm_A Protein kinase; transfe 99.1 2.3E-10 8E-15 133.0 10.7 149 396-586 6-160 (294)
194 1wou_A Thioredoxin -related pr 99.1 1.1E-10 3.7E-15 118.0 6.8 101 856-960 8-122 (123)
195 3s95_A LIMK-1, LIM domain kina 99.1 3.2E-10 1.1E-14 132.5 11.7 135 409-585 16-156 (310)
196 2djk_A PDI, protein disulfide- 99.1 9.8E-11 3.4E-15 120.2 6.4 101 856-962 9-114 (133)
197 3fxz_A Serine/threonine-protei 99.1 4.5E-10 1.5E-14 130.9 12.5 133 409-585 26-164 (297)
198 2izr_A Casein kinase I isoform 99.1 2.3E-10 7.8E-15 135.2 9.8 132 409-586 15-159 (330)
199 3t9t_A Tyrosine-protein kinase 99.1 4.2E-10 1.4E-14 128.1 11.6 134 409-585 14-152 (267)
200 1luf_A Muscle-specific tyrosin 99.1 3.7E-10 1.3E-14 133.6 11.6 138 409-587 53-224 (343)
201 3niz_A Rhodanese family protei 99.1 3.5E-10 1.2E-14 132.7 11.3 145 398-585 18-167 (311)
202 1x8b_A WEE1HU, WEE1-like prote 99.1 4E-10 1.4E-14 129.2 11.5 138 409-585 17-182 (289)
203 4azs_A Methyltransferase WBDD; 99.1 6.4E-11 2.2E-15 150.7 5.2 140 410-584 241-386 (569)
204 3uo3_A J-type CO-chaperone JAC 99.1 3.8E-11 1.3E-15 129.3 2.6 69 632-702 6-81 (181)
205 2guz_A Mitochondrial import in 99.0 1.6E-11 5.3E-16 112.2 -0.4 58 635-695 12-70 (71)
206 4e5w_A Tyrosine-protein kinase 99.0 3.5E-10 1.2E-14 131.3 10.9 137 409-585 27-174 (302)
207 3uzp_A CKI-delta, CKID, casein 99.0 3.6E-10 1.2E-14 130.6 10.9 134 409-586 15-157 (296)
208 3a8x_A Protein kinase C IOTA t 99.0 9.1E-10 3.1E-14 131.4 14.6 137 409-585 15-158 (345)
209 3a62_A Ribosomal protein S6 ki 99.0 5.1E-10 1.7E-14 132.4 12.2 139 409-586 23-170 (327)
210 4euu_A Serine/threonine-protei 99.0 6.8E-10 2.3E-14 130.4 13.1 137 409-585 15-164 (319)
211 3tki_A Serine/threonine-protei 99.0 3.9E-10 1.3E-14 133.2 11.1 135 409-585 13-153 (323)
212 1fmk_A C-SRC, P60-SRC, tyrosin 99.0 3.6E-10 1.2E-14 139.9 11.2 134 409-586 190-329 (452)
213 3a7i_A MST3 kinase, serine/thr 99.0 2.8E-10 9.7E-15 132.4 9.6 146 396-586 17-168 (303)
214 3dtc_A Mitogen-activated prote 99.0 4.7E-10 1.6E-14 128.1 11.3 137 409-586 13-165 (271)
215 1csn_A Casein kinase-1; phosph 99.0 3.4E-10 1.2E-14 131.0 10.1 132 409-586 16-160 (298)
216 3l9p_A Anaplastic lymphoma kin 99.0 3.5E-10 1.2E-14 136.0 10.6 138 409-587 77-234 (367)
217 1o6l_A RAC-beta serine/threoni 99.0 5.4E-10 1.8E-14 133.0 12.0 137 409-585 11-153 (337)
218 1qcf_A Haematopoetic cell kina 99.0 3.3E-10 1.1E-14 140.3 10.6 134 409-586 194-333 (454)
219 3zgw_A Maternal embryonic leuc 99.0 3.3E-10 1.1E-14 135.5 10.2 135 409-585 16-156 (347)
220 3uto_A Twitchin; kinase, muscl 99.0 2.7E-10 9.1E-15 145.1 9.9 136 409-586 163-306 (573)
221 4hgt_A Casein kinase I isoform 99.0 4.2E-10 1.4E-14 130.0 10.5 134 409-586 15-157 (296)
222 3p1a_A MYT1 kinase, membrane-a 99.0 6.3E-10 2.1E-14 130.5 12.0 137 409-585 63-205 (311)
223 1tki_A Titin; serine kinase, m 99.0 4.2E-10 1.5E-14 132.8 10.5 134 409-585 11-152 (321)
224 1kob_A Twitchin; kinase, intra 99.0 4.1E-10 1.4E-14 136.6 10.7 136 409-586 57-200 (387)
225 3op5_A Serine/threonine-protei 99.0 2.2E-10 7.5E-15 137.5 8.2 144 409-586 41-203 (364)
226 1mp8_A Focal adhesion kinase 1 99.0 4.8E-10 1.7E-14 129.1 10.8 136 409-586 21-165 (281)
227 3ork_A Serine/threonine protei 99.0 2.9E-10 9.8E-15 133.2 9.0 139 409-586 18-165 (311)
228 3uim_A Brassinosteroid insensi 99.0 2.9E-10 1E-14 133.7 9.1 136 409-585 36-182 (326)
229 1rdq_E PKA C-alpha, CAMP-depen 99.0 4.3E-10 1.5E-14 134.5 10.6 137 409-585 47-189 (350)
230 3sv0_A Casein kinase I-like; t 99.0 4E-10 1.4E-14 140.7 10.6 134 409-586 13-155 (483)
231 1ob3_A PFPK5, cell division co 99.0 3.1E-10 1E-14 131.3 9.0 137 409-586 8-149 (288)
232 3nsz_A CK II alpha, casein kin 99.0 7.3E-10 2.5E-14 130.4 12.3 130 409-585 42-179 (330)
233 1qpc_A LCK kinase; alpha beta 99.0 5.7E-10 2E-14 128.1 11.1 133 409-585 19-157 (279)
234 3p86_A Serine/threonine-protei 99.0 7.2E-10 2.5E-14 130.1 11.9 136 409-585 43-187 (309)
235 1u59_A Tyrosine-protein kinase 99.0 5.7E-10 1.9E-14 128.9 10.8 136 409-586 16-159 (287)
236 2vd5_A DMPK protein; serine/th 99.0 6.3E-10 2.1E-14 136.1 11.7 138 409-586 67-211 (412)
237 3kp8_A Vkorc1/thioredoxin doma 99.0 7.6E-11 2.6E-15 116.4 2.9 77 873-962 12-94 (106)
238 1k9a_A Carboxyl-terminal SRC k 99.0 6E-10 2.1E-14 137.8 11.7 133 409-585 199-337 (450)
239 4f0f_A Serine/threonine-protei 99.0 1.7E-10 5.7E-15 133.1 6.3 140 409-585 25-177 (287)
240 3ugc_A Tyrosine-protein kinase 99.0 4.2E-10 1.4E-14 130.4 9.7 137 409-586 16-163 (295)
241 2i0e_A Protein kinase C-beta I 99.0 5.6E-10 1.9E-14 133.8 10.9 137 409-585 26-169 (353)
242 2h8h_A Proto-oncogene tyrosine 99.0 5E-10 1.7E-14 141.7 10.9 134 409-586 273-412 (535)
243 3lxp_A Non-receptor tyrosine-p 99.0 6.6E-10 2.3E-14 130.6 11.2 135 409-585 37-182 (318)
244 1t46_A HOMO sapiens V-KIT hard 99.0 8.3E-10 2.8E-14 128.7 11.8 137 409-586 29-194 (313)
245 3tt0_A Basic fibroblast growth 99.0 9.7E-10 3.3E-14 132.8 12.7 137 409-585 75-239 (382)
246 1fot_A TPK1 delta, CAMP-depend 99.0 6.4E-10 2.2E-14 131.2 10.8 137 409-585 12-154 (318)
247 3vhe_A Vascular endothelial gr 99.0 5.7E-10 1.9E-14 133.0 10.4 137 409-585 28-241 (359)
248 1xjd_A Protein kinase C, theta 99.0 9.7E-10 3.3E-14 131.3 12.4 137 409-585 23-166 (345)
249 3uqc_A Probable conserved tran 99.0 5.5E-10 1.9E-14 129.7 9.9 129 402-574 32-163 (286)
250 3kk8_A Calcium/calmodulin depe 99.0 1.2E-09 4.2E-14 125.5 12.7 136 409-585 12-156 (284)
251 1rjb_A FL cytokine receptor; k 99.0 7E-10 2.4E-14 131.5 11.0 137 409-586 51-221 (344)
252 4fl3_A Tyrosine-protein kinase 99.0 2.4E-09 8.1E-14 138.2 16.7 138 407-586 373-518 (635)
253 2bdw_A Hypothetical protein K1 99.0 9E-10 3.1E-14 132.3 12.0 146 398-586 26-180 (362)
254 3uc3_A Serine/threonine-protei 99.0 7.9E-10 2.7E-14 132.7 11.5 133 409-585 26-166 (361)
255 4aw2_A Serine/threonine-protei 99.0 6E-10 2.1E-14 137.3 10.6 137 409-585 80-223 (437)
256 3v8s_A RHO-associated protein 99.0 6.1E-10 2.1E-14 136.2 10.4 136 409-585 75-216 (410)
257 2ozo_A Tyrosine-protein kinase 99.0 1.3E-09 4.3E-14 140.2 13.9 136 409-586 342-485 (613)
258 2h6d_A 5'-AMP-activated protei 99.0 8.5E-10 2.9E-14 126.3 11.0 137 409-585 17-159 (276)
259 3lxl_A Tyrosine-protein kinase 99.0 8E-10 2.7E-14 130.2 11.1 136 409-585 29-175 (327)
260 2j7t_A Serine/threonine-protei 99.0 9.2E-10 3.2E-14 127.7 11.5 145 397-585 15-165 (302)
261 1vzo_A Ribosomal protein S6 ki 99.0 6.2E-10 2.1E-14 133.2 10.2 139 409-585 60-207 (355)
262 1u5q_A Serine/threonine protei 99.0 1E-09 3.6E-14 131.0 12.2 149 395-585 48-202 (348)
263 3f66_A Hepatocyte growth facto 99.0 7.7E-10 2.6E-14 128.2 10.7 137 409-585 31-176 (298)
264 2nru_A Interleukin-1 receptor- 99.0 1.6E-09 5.4E-14 126.2 13.4 140 407-585 35-181 (307)
265 2qr7_A Ribosomal protein S6 ki 99.0 7.7E-10 2.6E-14 131.9 10.9 139 399-585 20-168 (342)
266 3cc6_A Protein tyrosine kinase 99.0 1.6E-09 5.6E-14 124.5 13.2 135 409-585 18-161 (281)
267 3fdn_A Serine/threonine-protei 99.0 7E-10 2.4E-14 127.5 10.1 136 409-584 15-156 (279)
268 3q4u_A Activin receptor type-1 99.0 5.8E-10 2E-14 129.2 9.5 131 409-584 14-160 (301)
269 3soa_A Calcium/calmodulin-depe 99.0 1.1E-09 3.6E-14 135.5 12.3 144 399-585 9-161 (444)
270 2jii_A Serine/threonine-protei 99.0 5.2E-10 1.8E-14 133.4 9.3 143 409-586 48-210 (352)
271 2xir_A Vascular endothelial gr 99.0 6.8E-10 2.3E-14 129.6 10.0 137 409-585 33-196 (316)
272 2y0a_A Death-associated protei 99.0 1.1E-09 3.7E-14 129.5 11.7 148 400-586 10-167 (326)
273 2lst_A Thioredoxin; structural 98.5 4.7E-11 1.6E-15 121.3 0.0 91 871-963 17-116 (130)
274 4dc2_A Protein kinase C IOTA t 99.0 1E-09 3.5E-14 133.6 11.7 137 409-585 58-201 (396)
275 2w4o_A Calcium/calmodulin-depe 99.0 7E-10 2.4E-14 132.5 10.1 132 409-585 59-199 (349)
276 1xbb_A Tyrosine-protein kinase 99.0 2.1E-09 7.2E-14 124.3 13.8 136 408-585 22-165 (291)
277 2pvf_A Fibroblast growth facto 99.0 1.4E-09 4.7E-14 128.7 12.4 137 409-586 41-206 (334)
278 1cm8_A Phosphorylated MAP kina 99.0 8E-10 2.7E-14 133.0 10.5 135 409-585 31-176 (367)
279 2yex_A Serine/threonine-protei 99.0 1.1E-09 3.6E-14 125.3 11.0 135 409-585 13-153 (276)
280 3c0i_A Peripheral plasma membr 99.0 1.1E-09 3.8E-14 130.8 11.6 148 399-585 22-181 (351)
281 3llt_A Serine/threonine kinase 99.0 8.3E-10 2.8E-14 131.8 10.4 126 409-574 41-171 (360)
282 2ycf_A Serine/threonine-protei 99.0 1.1E-09 3.9E-14 128.6 11.4 141 409-585 16-165 (322)
283 3en9_A Glycoprotease, O-sialog 99.0 4.9E-10 1.7E-14 141.8 8.8 139 404-584 337-476 (540)
284 4fvq_A Tyrosine-protein kinase 99.0 1.2E-09 4.1E-14 125.9 11.3 135 409-585 14-169 (289)
285 3is5_A Calcium-dependent prote 99.0 1.2E-09 4.2E-14 126.1 11.4 144 399-585 20-175 (285)
286 3f3z_A Calcium/calmodulin-depe 99.0 1.3E-09 4.4E-14 124.9 11.5 134 409-585 15-157 (277)
287 3cok_A Serine/threonine-protei 99.0 1.9E-09 6.7E-14 123.5 12.8 149 395-585 6-160 (278)
288 4eut_A Serine/threonine-protei 99.0 1.2E-09 4.2E-14 132.7 11.7 137 409-585 15-164 (396)
289 1phk_A Phosphorylase kinase; g 99.0 1.9E-09 6.4E-14 124.9 12.7 143 409-585 23-172 (298)
290 3g33_A Cell division protein k 99.0 1.8E-09 6.2E-14 126.0 12.7 143 409-585 15-168 (308)
291 3o0g_A Cell division protein k 99.0 6.4E-10 2.2E-14 128.8 8.7 136 409-585 8-149 (292)
292 3eqc_A Dual specificity mitoge 99.0 8.1E-10 2.8E-14 132.0 9.8 149 395-587 27-182 (360)
293 3dbq_A Dual specificity protei 99.0 1.8E-09 6.3E-14 128.3 12.7 136 409-586 15-156 (343)
294 3n9x_A Phosphotransferase; mal 99.0 1E-09 3.6E-14 134.9 10.9 137 409-586 32-178 (432)
295 2w1i_A JAK2; chromosomal rearr 99.0 1.6E-09 5.3E-14 127.8 11.9 136 409-585 47-193 (326)
296 1wak_A Serine/threonine-protei 99.0 7.7E-10 2.6E-14 133.4 9.4 128 409-574 43-181 (397)
297 2ac3_A MAP kinase-interacting 99.0 2E-09 6.7E-14 125.9 12.5 138 408-587 18-164 (316)
298 3iv4_A Putative oxidoreductase 99.0 2.1E-10 7.2E-15 113.1 3.6 94 859-958 13-111 (112)
299 3an0_A Dual specificity mitoge 99.0 1.7E-09 5.9E-14 128.0 12.2 137 409-586 57-203 (340)
300 3kfa_A Tyrosine-protein kinase 99.0 1.2E-09 4E-14 125.9 10.4 134 409-585 19-159 (288)
301 1ilo_A Conserved hypothetical 99.0 1E-09 3.5E-14 100.7 7.9 73 877-958 3-76 (77)
302 1byg_A CSK, protein (C-termina 99.0 7.3E-10 2.5E-14 127.2 8.6 134 409-586 27-166 (278)
303 3h4j_B AMPK kdaid, SNF1-like p 99.0 8.8E-10 3E-14 131.2 9.5 136 409-585 15-156 (336)
304 2yab_A Death-associated protei 99.0 1.4E-09 4.9E-14 130.6 11.3 149 398-585 9-167 (361)
305 3qup_A Tyrosine-protein kinase 99.0 1.4E-09 4.7E-14 127.8 11.0 139 409-586 29-186 (323)
306 1nxk_A MAP kinase-activated pr 99.0 1.1E-09 3.7E-14 133.4 10.4 132 409-585 68-212 (400)
307 4agu_A Cyclin-dependent kinase 98.9 1.3E-09 4.5E-14 127.1 10.5 136 409-585 9-150 (311)
308 2zmd_A Dual specificity protei 98.9 1.8E-09 6.2E-14 131.0 12.1 136 409-586 62-203 (390)
309 2r5t_A Serine/threonine-protei 98.9 9.5E-10 3.2E-14 132.8 9.5 138 409-586 44-188 (373)
310 2x7f_A TRAF2 and NCK-interacti 98.9 1.9E-09 6.5E-14 126.6 11.9 136 409-586 30-178 (326)
311 1p4o_A Insulin-like growth fac 98.9 1.3E-09 4.5E-14 127.7 10.4 138 409-587 31-188 (322)
312 3qyz_A Mitogen-activated prote 98.9 1.9E-09 6.4E-14 129.3 11.9 134 409-585 33-176 (364)
313 3dml_A Putative uncharacterize 98.9 2.3E-10 8E-15 114.2 3.3 87 872-962 17-109 (116)
314 2a2a_A Death-associated protei 98.9 1.7E-09 5.9E-14 127.1 11.4 148 399-585 10-167 (321)
315 3i6u_A CDS1, serine/threonine- 98.9 1.5E-09 5.2E-14 132.9 11.3 141 409-585 141-290 (419)
316 2eu9_A Dual specificity protei 98.9 1.9E-09 6.4E-14 127.8 11.7 146 399-585 17-190 (355)
317 1opk_A P150, C-ABL, proto-onco 98.9 1.2E-09 4.2E-14 136.8 10.5 134 409-585 226-366 (495)
318 3c1x_A Hepatocyte growth facto 98.9 6.3E-10 2.1E-14 134.3 7.6 138 409-586 95-241 (373)
319 2yfx_A Tyrosine-protein kinase 98.9 1.4E-09 4.8E-14 128.2 10.4 138 409-587 36-193 (327)
320 2a19_B Interferon-induced, dou 98.9 1.4E-09 4.7E-14 124.8 10.0 132 409-585 17-170 (284)
321 3fhr_A MAP kinase-activated pr 98.9 1.6E-09 5.6E-14 128.5 10.9 132 409-585 35-179 (336)
322 2ivs_A Proto-oncogene tyrosine 98.9 1.6E-09 5.3E-14 126.4 10.5 136 409-585 29-198 (314)
323 2y94_A 5'-AMP-activated protei 98.9 1.5E-09 5E-14 135.3 10.8 137 409-585 22-164 (476)
324 4aaa_A Cyclin-dependent kinase 98.9 1.3E-09 4.6E-14 128.7 9.9 137 409-586 31-173 (331)
325 3mdy_A Bone morphogenetic prot 98.9 1.5E-09 5E-14 128.0 10.2 132 409-585 43-190 (337)
326 3f9u_A Putative exported cytoc 98.9 3.5E-10 1.2E-14 120.9 4.5 104 857-962 30-165 (172)
327 2acx_A G protein-coupled recep 98.9 1.9E-09 6.4E-14 136.8 11.8 138 409-585 190-334 (576)
328 4fr4_A YANK1, serine/threonine 98.9 1.4E-09 4.9E-14 131.7 10.3 137 409-585 21-163 (384)
329 1b6c_B TGF-B superfamily recep 98.9 2E-09 6.7E-14 127.3 11.1 132 409-585 48-195 (342)
330 2b9h_A MAP kinase FUS3, mitoge 98.9 2.1E-09 7.3E-14 127.7 11.5 135 409-586 17-161 (353)
331 3bhy_A Death-associated protei 98.9 2.9E-09 1E-13 122.3 12.1 140 409-585 11-160 (283)
332 3mwu_A Calmodulin-domain prote 98.9 2E-09 6.8E-14 134.4 11.3 142 401-585 22-172 (486)
333 3pfq_A PKC-B, PKC-beta, protei 98.9 2.4E-09 8.2E-14 139.1 12.5 138 409-585 347-490 (674)
334 1zy4_A Serine/threonine-protei 98.9 2.5E-09 8.5E-14 123.6 11.3 135 409-585 12-164 (303)
335 3oz6_A Mitogen-activated prote 98.9 2.8E-09 9.5E-14 129.0 12.2 136 409-585 15-157 (388)
336 3g2f_A Bone morphogenetic prot 98.9 1.8E-09 6.2E-14 127.4 10.4 132 409-585 19-168 (336)
337 3gni_B Strad alpha; kinase fol 98.9 2.4E-09 8.1E-14 129.5 11.5 136 409-584 31-175 (389)
338 4ejn_A RAC-alpha serine/threon 98.9 9.9E-10 3.4E-14 135.6 8.3 137 409-585 154-297 (446)
339 3pls_A Macrophage-stimulating 98.9 2.2E-09 7.4E-14 124.2 10.5 138 409-586 27-173 (298)
340 3lm5_A Serine/threonine-protei 98.9 2.3E-09 7.9E-14 126.5 11.0 138 408-585 34-182 (327)
341 2xrw_A Mitogen-activated prote 98.9 4E-09 1.4E-13 126.9 13.2 135 409-586 31-176 (371)
342 3ttj_A Mitogen-activated prote 98.9 3.8E-09 1.3E-13 131.2 13.2 135 409-586 68-213 (464)
343 2owb_A Serine/threonine-protei 98.9 3.1E-09 1.1E-13 125.9 11.9 138 409-586 47-190 (335)
344 3coi_A Mitogen-activated prote 98.9 3.8E-09 1.3E-13 125.9 12.7 135 409-586 30-175 (353)
345 2jam_A Calcium/calmodulin-depe 98.9 3.5E-09 1.2E-13 123.3 12.2 133 409-584 15-156 (304)
346 3pg1_A Mitogen-activated prote 98.9 2.2E-09 7.6E-14 128.2 10.7 146 409-585 28-182 (362)
347 2pzi_A Probable serine/threoni 98.9 1.2E-09 4.3E-14 142.1 9.1 135 409-586 86-230 (681)
348 2vgo_A Serine/threonine-protei 98.9 2.3E-09 7.8E-14 123.5 10.3 136 409-584 20-161 (284)
349 4exu_A Mitogen-activated prote 98.9 3.5E-09 1.2E-13 127.4 12.3 135 409-586 48-193 (371)
350 3soc_A Activin receptor type-2 98.9 2E-09 6.9E-14 126.8 10.1 132 409-585 30-179 (322)
351 1ua2_A CAK, cell division prot 98.9 1.3E-09 4.3E-14 129.9 8.3 140 409-586 16-161 (346)
352 2pmi_A Negative RE, cyclin-dep 98.9 2E-09 6.7E-14 126.6 9.9 136 409-586 11-157 (317)
353 1blx_A Cyclin-dependent kinase 98.9 2.3E-09 7.9E-14 125.8 10.4 140 409-585 17-168 (326)
354 2rku_A Serine/threonine-protei 98.9 3.8E-09 1.3E-13 122.3 12.1 138 409-586 21-164 (294)
355 3rp9_A Mitogen-activated prote 98.9 2.4E-09 8.2E-14 132.5 11.0 136 409-585 59-204 (458)
356 2i1m_A Macrophage colony-stimu 98.9 3.8E-09 1.3E-13 124.6 12.2 137 409-586 52-213 (333)
357 3m2w_A MAP kinase-activated pr 98.9 2.9E-09 1E-13 123.8 11.0 131 409-584 24-167 (299)
358 3lij_A Calcium/calmodulin depe 98.9 2.4E-09 8.1E-14 134.0 10.9 145 398-585 34-187 (494)
359 1z57_A Dual specificity protei 98.9 5E-09 1.7E-13 123.1 13.0 137 409-585 20-185 (339)
360 3hko_A Calcium/calmodulin-depe 98.9 1.3E-09 4.5E-14 129.1 8.1 142 409-587 32-220 (345)
361 1lu4_A Soluble secreted antige 98.9 4.2E-09 1.5E-13 106.8 10.7 87 872-962 23-135 (136)
362 2wei_A Calmodulin-domain prote 98.9 3.1E-09 1.1E-13 122.7 11.0 136 409-585 28-172 (287)
363 2eva_A TAK1 kinase - TAB1 chim 98.9 2.1E-09 7.2E-14 125.7 9.6 131 409-586 14-155 (307)
364 3lb7_A RAF proto-oncogene seri 98.9 3.3E-09 1.1E-13 124.2 11.3 134 409-585 42-180 (307)
365 2wqm_A Serine/threonine-protei 98.9 3.2E-09 1.1E-13 123.8 11.2 138 409-585 38-184 (310)
366 3rgf_A Cyclin-dependent kinase 98.9 3.5E-09 1.2E-13 128.9 11.9 146 396-586 15-181 (405)
367 2eue_A Carbon catabolite derep 98.9 2.3E-09 7.9E-14 122.8 9.8 136 409-585 19-160 (275)
368 3q60_A ROP5B; pseudokinase, tr 98.9 1.6E-09 5.6E-14 130.2 8.8 140 409-585 68-242 (371)
369 2wtk_C Serine/threonine-protei 98.9 3.6E-09 1.2E-13 122.9 11.2 139 409-585 11-157 (305)
370 3erw_A Sporulation thiol-disul 98.9 3.3E-09 1.1E-13 108.7 9.6 86 872-958 33-144 (145)
371 3kvw_A DYRK2, dual specificity 98.9 3.6E-09 1.2E-13 130.1 11.6 136 409-584 103-249 (429)
372 3mtl_A Cell division protein k 98.9 7.6E-10 2.6E-14 130.5 5.4 135 409-585 8-148 (324)
373 3mi9_A Cell division protein k 98.9 1.6E-09 5.5E-14 128.9 8.3 138 409-586 23-173 (351)
374 2fst_X Mitogen-activated prote 98.9 3.3E-09 1.1E-13 127.6 11.1 136 409-586 35-181 (367)
375 1u46_A ACK-1, activated CDC42 98.9 3.3E-09 1.1E-13 122.3 10.5 137 409-585 24-169 (291)
376 2buj_A Serine/threonine-protei 98.9 5.2E-09 1.8E-13 122.4 12.3 135 409-584 35-181 (317)
377 2h34_A Serine/threonine-protei 98.9 5.5E-09 1.9E-13 122.2 12.4 137 409-585 40-182 (309)
378 2r3i_A Cell division protein k 98.9 2.3E-09 8E-14 124.1 9.0 137 409-586 9-152 (299)
379 3brb_A Proto-oncogene tyrosine 98.9 2.6E-09 8.9E-14 124.8 9.3 140 409-587 40-197 (313)
380 3kex_A Receptor tyrosine-prote 98.9 1.6E-09 5.6E-14 127.6 7.5 136 409-586 19-164 (325)
381 2ju5_A Thioredoxin disulfide i 98.9 1.8E-09 6E-14 113.7 7.0 89 872-963 46-152 (154)
382 3og7_A AKAP9-BRAF fusion prote 98.9 2.1E-09 7.1E-14 124.4 8.2 133 409-585 30-168 (289)
383 1zzo_A RV1677; thioredoxin fol 98.9 5.3E-09 1.8E-13 105.8 10.3 87 872-962 24-134 (136)
384 3nyv_A Calmodulin-domain prote 98.9 2.3E-09 7.8E-14 133.7 9.1 146 398-585 23-177 (484)
385 3fme_A Dual specificity mitoge 98.9 6.5E-09 2.2E-13 119.7 12.2 137 409-586 13-159 (290)
386 2i6l_A Mitogen-activated prote 98.9 4.2E-09 1.4E-13 122.8 10.7 141 399-585 9-169 (320)
387 3gxj_A TGF-beta receptor type- 98.9 5.3E-10 1.8E-14 129.6 3.0 131 409-584 9-155 (303)
388 2pml_X PFPK7, Ser/Thr protein 98.9 3E-09 1E-13 126.2 9.5 151 409-585 37-200 (348)
389 3q5i_A Protein kinase; CDPK, m 98.9 5.5E-09 1.9E-13 131.1 12.4 154 398-585 33-197 (504)
390 3poz_A Epidermal growth factor 98.9 3.6E-09 1.2E-13 124.9 9.9 136 409-586 21-166 (327)
391 3gbz_A Kinase, CMGC CDK; ssgci 98.9 2E-09 6.8E-14 127.2 7.4 137 409-587 40-187 (329)
392 2w5a_A Serine/threonine-protei 98.9 5.5E-09 1.9E-13 119.7 10.8 138 409-585 12-164 (279)
393 1t4h_A Serine/threonine-protei 98.8 7.3E-09 2.5E-13 119.6 11.6 136 409-584 32-179 (290)
394 3cek_A Dual specificity protei 98.8 8E-09 2.7E-13 120.8 12.1 137 409-586 34-175 (313)
395 1sen_A Thioredoxin-like protei 98.8 8.7E-10 3E-14 117.4 3.3 89 872-962 45-147 (164)
396 2iwi_A Serine/threonine-protei 98.8 2.8E-09 9.7E-14 124.5 7.6 144 409-585 37-188 (312)
397 2v62_A Serine/threonine-protei 98.8 2.3E-09 8E-14 127.5 7.0 146 409-586 43-202 (345)
398 2vx3_A Dual specificity tyrosi 98.8 6E-09 2E-13 125.8 10.7 138 409-586 60-210 (382)
399 3or5_A Thiol:disulfide interch 98.8 8.5E-09 2.9E-13 108.5 10.4 91 872-963 33-151 (165)
400 2f9s_A Thiol-disulfide oxidore 98.8 7.5E-09 2.6E-13 107.6 9.5 91 873-964 26-139 (151)
401 2vwi_A Serine/threonine-protei 98.8 1.8E-09 6.3E-14 125.0 5.4 136 409-585 21-169 (303)
402 2b5x_A YKUV protein, TRXY; thi 98.8 6.6E-09 2.2E-13 106.9 8.9 90 872-963 28-145 (148)
403 3eb0_A Putative uncharacterize 98.8 4E-09 1.4E-13 127.4 8.3 70 516-586 113-191 (383)
404 1fvr_A Tyrosine-protein kinase 98.8 4.8E-09 1.6E-13 123.6 8.7 136 409-585 31-190 (327)
405 2lja_A Putative thiol-disulfid 98.8 1.5E-08 5.3E-13 105.1 11.6 91 873-964 30-144 (152)
406 1q8y_A SR protein kinase; tran 98.8 7.1E-09 2.4E-13 124.0 10.2 138 409-585 25-186 (373)
407 3raz_A Thioredoxin-related pro 98.8 7.7E-09 2.6E-13 107.7 9.2 90 873-963 24-140 (151)
408 2clq_A Mitogen-activated prote 98.8 6.4E-09 2.2E-13 120.0 9.4 135 409-585 28-171 (295)
409 3dls_A PAS domain-containing s 98.8 4.6E-09 1.6E-13 124.7 8.2 148 401-585 24-178 (335)
410 3ll6_A Cyclin G-associated kin 98.8 1.7E-08 5.9E-13 118.5 12.3 136 409-585 34-186 (337)
411 2rio_A Serine/threonine-protei 98.8 8.9E-09 3E-13 126.7 9.7 128 408-585 20-176 (434)
412 3lzb_A Epidermal growth factor 98.8 7.6E-09 2.6E-13 122.2 8.5 136 409-586 21-166 (327)
413 2j0j_A Focal adhesion kinase 1 98.8 1.8E-08 6.2E-13 130.4 12.7 135 409-585 396-539 (656)
414 1nd4_A Aminoglycoside 3'-phosp 98.8 8.2E-09 2.8E-13 116.7 8.2 88 397-529 13-103 (264)
415 3hcz_A Possible thiol-disulfid 98.8 1.4E-08 4.9E-13 104.5 9.0 88 873-961 31-144 (148)
416 2dyl_A Dual specificity mitoge 98.7 2.6E-08 8.9E-13 116.2 12.1 137 409-586 31-174 (318)
417 2h30_A Thioredoxin, peptide me 98.7 4.8E-09 1.6E-13 110.4 5.2 91 872-963 37-156 (164)
418 3p23_A Serine/threonine-protei 98.7 6E-09 2.1E-13 128.3 6.8 131 409-586 30-172 (432)
419 3kmu_A ILK, integrin-linked ki 98.7 9.8E-09 3.3E-13 116.7 8.1 135 409-583 16-159 (271)
420 3a99_A Proto-oncogene serine/t 98.7 4.1E-09 1.4E-13 124.0 5.0 150 398-585 40-198 (320)
421 3aln_A Dual specificity mitoge 98.7 2E-08 7E-13 118.1 10.8 137 409-586 28-175 (327)
422 3fkf_A Thiol-disulfide oxidore 98.7 2.1E-08 7.3E-13 103.2 9.5 86 873-962 33-145 (148)
423 1j1b_A Glycogen synthase kinas 98.7 9.7E-09 3.3E-13 125.8 7.9 132 409-586 60-206 (420)
424 3qa8_A MGC80376 protein; kinas 98.7 5E-09 1.7E-13 134.4 5.4 137 409-585 20-172 (676)
425 3ph9_A Anterior gradient prote 98.7 3.4E-09 1.2E-13 111.3 3.1 90 872-962 43-144 (151)
426 2l5o_A Putative thioredoxin; s 98.7 1.9E-08 6.6E-13 104.5 8.2 89 873-962 28-140 (153)
427 3gl3_A Putative thiol:disulfid 98.7 4.2E-08 1.4E-12 101.8 10.2 92 872-964 27-143 (152)
428 3e3p_A Protein kinase, putativ 98.7 2.6E-08 9E-13 118.6 9.8 135 409-585 29-180 (360)
429 3lor_A Thiol-disulfide isomera 98.7 3E-08 1E-12 103.8 8.6 90 873-963 30-155 (160)
430 3h79_A Thioredoxin-like protei 98.7 3.5E-09 1.2E-13 107.2 1.3 79 748-841 18-103 (127)
431 2lrn_A Thiol:disulfide interch 98.7 4.7E-08 1.6E-12 101.8 10.0 87 873-963 29-141 (152)
432 3eyt_A Uncharacterized protein 98.7 3.7E-08 1.3E-12 103.0 8.8 90 873-963 28-152 (158)
433 3ia1_A THIO-disulfide isomeras 98.7 4.4E-08 1.5E-12 102.0 9.1 87 874-964 31-145 (154)
434 4evm_A Thioredoxin family prot 98.7 5.4E-08 1.9E-12 98.1 9.5 88 872-961 21-137 (138)
435 4e7w_A Glycogen synthase kinas 98.6 2.5E-08 8.4E-13 121.1 8.2 132 409-585 46-190 (394)
436 2h8l_A Protein disulfide-isome 98.6 4.3E-07 1.5E-11 103.4 17.1 195 856-1073 9-228 (252)
437 2fgx_A Putative thioredoxin; N 98.6 2.8E-08 9.6E-13 97.9 6.0 78 874-958 29-106 (107)
438 3d1u_A Putative fructosamine-3 98.6 7.5E-08 2.6E-12 112.0 10.5 95 386-529 4-98 (288)
439 2y4i_B KSR2, HKSR2, kinase sup 98.6 8E-09 2.7E-13 120.8 2.1 135 409-585 39-177 (319)
440 3evi_A Phosducin-like protein 98.6 1.3E-08 4.3E-13 102.5 3.1 78 749-841 7-84 (118)
441 3zzx_A Thioredoxin; oxidoreduc 98.6 5.1E-09 1.7E-13 103.1 0.1 73 753-841 9-84 (105)
442 2b1k_A Thiol:disulfide interch 98.6 4.8E-08 1.6E-12 103.5 7.1 86 872-962 50-159 (168)
443 3ira_A Conserved protein; meth 98.6 2.8E-08 9.7E-13 106.5 5.3 79 859-942 28-118 (173)
444 1z6n_A Hypothetical protein PA 98.6 3E-08 1E-12 106.0 5.0 83 872-959 53-139 (167)
445 1ttz_A Conserved hypothetical 98.6 4.1E-08 1.4E-12 93.2 5.3 74 877-962 3-76 (87)
446 3ec3_A Protein disulfide-isome 98.6 7.4E-07 2.5E-11 101.4 16.7 191 861-1073 15-226 (250)
447 3kp9_A Vkorc1/thioredoxin doma 98.6 2.1E-08 7.3E-13 115.8 3.6 74 876-962 200-279 (291)
448 3dzo_A Rhoptry kinase domain; 98.6 5.4E-08 1.8E-12 119.0 7.4 69 516-585 180-259 (413)
449 2djj_A PDI, protein disulfide- 98.6 3E-08 1E-12 98.9 4.2 75 749-840 11-91 (121)
450 3tm0_A Aminoglycoside 3'-phosp 98.6 8.4E-08 2.9E-12 109.2 8.4 78 410-531 21-100 (263)
451 3ewl_A Uncharacterized conserv 98.5 1E-07 3.5E-12 97.8 8.1 86 873-962 27-140 (142)
452 3lwa_A Secreted thiol-disulfid 98.5 1.4E-07 4.7E-12 101.6 9.3 89 873-962 59-180 (183)
453 3hdc_A Thioredoxin family prot 98.5 1.9E-07 6.5E-12 97.9 10.1 89 873-962 41-151 (158)
454 3kcm_A Thioredoxin family prot 98.5 1.6E-07 5.3E-12 97.7 9.3 91 872-963 27-143 (154)
455 3ha9_A Uncharacterized thiored 98.5 1.6E-07 5.4E-12 99.1 9.3 85 873-962 37-163 (165)
456 2av4_A Thioredoxin-like protei 98.5 1.4E-08 4.8E-13 105.8 1.1 74 753-841 30-106 (160)
457 3eur_A Uncharacterized protein 98.5 1.7E-07 6E-12 96.3 8.6 83 873-959 31-141 (142)
458 2lrt_A Uncharacterized protein 98.5 1.7E-07 5.9E-12 97.9 8.5 85 873-958 35-143 (152)
459 3qou_A Protein YBBN; thioredox 98.5 3.1E-08 1.1E-12 114.7 2.8 79 747-840 9-90 (287)
460 2y7j_A Phosphorylase B kinase 98.5 4E-08 1.4E-12 117.9 3.8 120 83-203 15-156 (365)
461 4euy_A Uncharacterized protein 98.5 3E-08 1E-12 96.7 2.1 72 753-840 9-81 (105)
462 2dj3_A Protein disulfide-isome 98.5 6.8E-08 2.3E-12 98.1 4.7 77 749-840 11-91 (133)
463 1kng_A Thiol:disulfide interch 98.5 1.3E-07 4.3E-12 98.5 6.4 86 873-962 42-151 (156)
464 2dj0_A Thioredoxin-related tra 98.5 4.4E-08 1.5E-12 100.6 2.7 84 749-840 11-97 (137)
465 2dml_A Protein disulfide-isome 98.4 8E-08 2.7E-12 97.2 3.9 76 749-840 21-99 (130)
466 1i5g_A Tryparedoxin II; electr 98.4 3.4E-07 1.2E-11 94.2 8.7 71 873-944 28-125 (144)
467 2dbc_A PDCL2, unnamed protein 98.4 5.4E-08 1.9E-12 100.0 2.5 76 750-840 15-90 (135)
468 2ywi_A Hypothetical conserved 98.4 2.2E-07 7.6E-12 100.9 7.3 88 874-962 47-173 (196)
469 3fw2_A Thiol-disulfide oxidore 98.4 5.7E-07 1.9E-11 93.3 9.6 86 873-962 33-147 (150)
470 1o8x_A Tryparedoxin, TRYX, TXN 98.4 4.4E-07 1.5E-11 93.7 8.6 70 873-943 28-124 (146)
471 2hyx_A Protein DIPZ; thioredox 98.4 2.9E-07 1E-11 109.7 8.2 89 873-962 82-198 (352)
472 2voc_A Thioredoxin; electron t 98.4 9E-08 3.1E-12 94.5 2.8 74 749-840 5-81 (112)
473 1jfu_A Thiol:disulfide interch 98.4 7.1E-07 2.4E-11 96.1 10.1 91 873-964 60-181 (186)
474 1o73_A Tryparedoxin; electron 98.4 4E-07 1.4E-11 93.5 7.6 71 873-944 28-125 (144)
475 3s9f_A Tryparedoxin; thioredox 98.4 4.7E-07 1.6E-11 96.2 8.0 70 873-943 48-144 (165)
476 3d6i_A Monothiol glutaredoxin- 98.4 6.9E-08 2.4E-12 95.0 1.4 75 753-840 9-86 (112)
477 3bj5_A Protein disulfide-isome 98.4 1.4E-06 4.7E-11 91.0 11.3 131 1070-1226 8-143 (147)
478 3hxs_A Thioredoxin, TRXP; elec 98.4 1E-07 3.5E-12 97.9 2.4 76 749-838 26-113 (141)
479 3die_A Thioredoxin, TRX; elect 98.3 9.9E-08 3.4E-12 92.4 1.6 74 749-840 7-83 (106)
480 4fo5_A Thioredoxin-like protei 98.3 8.6E-07 2.9E-11 91.2 8.6 83 873-959 32-141 (143)
481 2cvb_A Probable thiol-disulfid 98.3 9.3E-07 3.2E-11 95.5 9.3 89 873-963 33-159 (188)
482 3gnj_A Thioredoxin domain prot 98.3 8.8E-08 3E-12 93.7 1.0 77 748-840 7-86 (111)
483 1x5d_A Protein disulfide-isome 98.3 8.3E-08 2.8E-12 97.3 0.8 77 749-840 11-93 (133)
484 2dj1_A Protein disulfide-isome 98.3 1.3E-07 4.4E-12 97.0 2.1 77 748-840 20-101 (140)
485 3aps_A DNAJ homolog subfamily 98.3 9.2E-08 3.2E-12 95.6 0.9 76 749-840 7-85 (122)
486 3kh7_A Thiol:disulfide interch 98.3 5.8E-07 2E-11 96.4 7.2 85 873-962 58-166 (176)
487 1mek_A Protein disulfide isome 98.3 1.6E-07 5.3E-12 93.0 2.5 76 749-840 11-91 (120)
488 3ga4_A Dolichyl-diphosphooligo 98.3 1E-07 3.4E-12 102.4 1.2 81 747-841 20-114 (178)
489 1gh2_A Thioredoxin-like protei 98.3 6.7E-08 2.3E-12 94.4 -0.5 72 753-840 10-84 (107)
490 3f3q_A Thioredoxin-1; His TAG, 98.3 7.3E-08 2.5E-12 94.8 -0.2 72 753-840 15-87 (109)
491 3uvt_A Thioredoxin domain-cont 98.3 8.7E-08 3E-12 93.7 0.2 76 748-840 8-88 (111)
492 2o8v_B Thioredoxin 1; disulfid 98.3 2.3E-07 8E-12 94.2 3.3 76 749-840 26-104 (128)
493 3f7w_A Putative fructosamine-3 98.3 1.3E-06 4.4E-11 101.2 9.4 96 386-530 4-99 (288)
494 2qsi_A Putative hydrogenase ex 98.3 1.4E-07 4.7E-12 96.8 1.0 77 749-841 19-100 (137)
495 2qgv_A Hydrogenase-1 operon pr 98.3 1.1E-07 3.7E-12 97.9 0.2 77 749-841 21-102 (140)
496 1x5e_A Thioredoxin domain cont 98.3 1.5E-07 5.2E-12 94.8 1.2 75 748-840 10-87 (126)
497 2l5l_A Thioredoxin; structural 98.3 1.7E-07 5.9E-12 96.0 1.5 75 749-837 13-99 (136)
498 1t00_A Thioredoxin, TRX; redox 98.3 2E-07 6.8E-12 91.5 1.9 76 749-840 9-87 (112)
499 3dxb_A Thioredoxin N-terminall 98.3 2.5E-07 8.5E-12 103.3 2.8 76 749-840 16-94 (222)
500 2trx_A Thioredoxin; electron t 98.3 2.1E-07 7E-12 90.7 1.8 76 749-840 6-84 (108)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=7.4e-43 Score=461.74 Aligned_cols=523 Identities=17% Similarity=0.183 Sum_probs=327.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQD 711 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~ 711 (1578)
.....|+|++|||+++||.++||+|||+++++|||||++ ++.+.++|++|++||++|+||.+|+.||++|..+...+.
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~- 95 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ- 95 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC-
Confidence 344679999999999999999999999999999999995 678899999999999999999999999999976543221
Q ss_pred CCCcccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHHH
Q psy12972 712 SASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLM 791 (1578)
Q Consensus 712 ~~~~~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA 791 (1578)
+. .++.|. +|...||.-..+. ....++..||++.+ .++++|+|+||||||+||++++|+|+++|
T Consensus 96 --~~-----~~~~~~-~~~~~fg~~~~~~-----~v~~l~~~~f~~~i---~~~~~~lv~Fya~wC~~C~~~~p~~~~~a 159 (780)
T 3apo_A 96 --GG-----QYESWS-YYRYDFGIYDDDP-----EIITLERREFDAAV---NSGELWFVNFYSPGSSHSHDLAPTWREFA 159 (780)
T ss_dssp ----------------CCSSSSSTTTTCT-----TEEECCHHHHHHHH---TSSSCEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred --CC-----Cccccc-ccchhhcccCCCc-----ceeeechHhHHhhh---cCCCcEEEEEeCCCCcchhHhhHHHHHHH
Confidence 11 111111 2222333221111 34678888999998 56899999999999999999999999999
Q ss_pred HHhcCC-Ccceeeeeecc-cCccccccCCcccccccccc---c-------------------------------------
Q psy12972 792 DELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNH---M------------------------------------- 829 (1578)
Q Consensus 792 ~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i---~------------------------------------- 829 (1578)
+.+++. .++.++|..+. +|+..++.++++......+. .
T Consensus 160 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~ 239 (780)
T 3apo_A 160 KEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETA 239 (780)
T ss_dssp HHTTTTSEEEEEETTTCSSCC--------CEEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHH
T ss_pred HHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhh
Confidence 999874 44555554332 66666665554422100000 0
Q ss_pred ---cCcccccccc-cc----------------------------------------------cc-C-----------c--
Q psy12972 830 ---YNPFDDVFSE-GF----------------------------------------------NF-P-----------F-- 845 (1578)
Q Consensus 830 ---~~Ptiklf~~-~~----------------------------------------------~~-~-----------~-- 845 (1578)
..|.+.+|.+ .- .. . |
T Consensus 240 ~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g 319 (780)
T 3apo_A 240 FAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLN 319 (780)
T ss_dssp HHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEEC
T ss_pred hccCCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccc
Confidence 0000000000 00 00 0 0
Q ss_pred --------------------------c--------------C-----------------c-ccceeE-------------
Q psy12972 846 --------------------------E--------------E-----------------H-DISLFH------------- 854 (1578)
Q Consensus 846 --------------------------~--------------~-----------------~-~i~~~~------------- 854 (1578)
+ . . ....+.
T Consensus 320 ~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~ 399 (780)
T 3apo_A 320 SLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSD 399 (780)
T ss_dssp CCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHH
T ss_pred cccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhh
Confidence 0 0 0 000000
Q ss_pred ------------------------------------------EEeeccccccceecccCCCCcEEEEEEcCCCccccccc
Q psy12972 855 ------------------------------------------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE 892 (1578)
Q Consensus 855 ------------------------------------------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~ 892 (1578)
+.++|.++|.+. .+++++|.|||+||++|+.+.
T Consensus 400 ~~~~~p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~ 474 (780)
T 3apo_A 400 LYVFQPSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALL 474 (780)
T ss_dssp TTCCSCEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHH
T ss_pred ccccCChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHh
Confidence 123344444432 367999999999999999999
Q ss_pred HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCcccccccc
Q psy12972 893 PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSA 972 (1578)
Q Consensus 893 p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~ 972 (1578)
|.|+++|+.+++. +.|+.|||+.++.+|+.|||++ +||+++|++|+.. .+.|.++.++|.+|+.+.+.++ +..++.
T Consensus 475 p~~~~~a~~~~~~-v~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~g~~~-~~~g~~~~~~l~~fi~~~~~~~-v~~l~~ 550 (780)
T 3apo_A 475 PELRKASTLLYGQ-LKVGTLDCTIHEGLCNMYNIQA-YPTTVVFNQSSIH-EYEGHHSAEQILEFIEDLRNPS-VVSLTP 550 (780)
T ss_dssp HHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEEEETTEEE-EECSCSCHHHHHHHHHHHHSCS-EEECCH
T ss_pred HHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc-CCeEEEEcCCcee-eecCcccHHHHHHHHHhhcccc-eeecCc
Confidence 9999999999875 9999999999999999999998 9999999888774 4459999999999999988765 555678
Q ss_pred ccHHHHhhcccCCCcEEEEEeccCC---chHH-HHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccC
Q psy12972 973 TNVDAFLDNWREDNKVHALLFQRSL---PVRL-RYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKED 1048 (1578)
Q Consensus 973 ~~~~~fl~~~~~~~~~~VlfF~~~~---~~~~-~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~ 1048 (1578)
+++++++.....+..++|.||..-. .... .+...|..+++++.|+.+++ ..+..++++|+|.+ .|++++|+.+
T Consensus 551 ~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~--~~~~~l~~~~~v~~-~Pti~~~~~~ 627 (780)
T 3apo_A 551 STFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDC--GQYHSFCTQENVQR-YPEIRFYPQK 627 (780)
T ss_dssp HHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEET--TTTHHHHHHTTCCS-SSEEEEECCC
T ss_pred ccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEEC--cchHHHHHHcCCCC-CCeEEEEcCC
Confidence 8999988763122345666663321 1111 22223445667899998854 46788999999987 5799999764
Q ss_pred CCCCcccc-ccC-CCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEe-cCCcchHHHHHHHHHHHhhccCC
Q psy12972 1049 KDRPSASI-TMN-SIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFV 1125 (1578)
Q Consensus 1049 ~~~~~~~l-~~~-~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~-~~~~~~~~~~~~lr~vA~~~~~~ 1125 (1578)
......+. ..+ ..+...|.+|+.....+.+.+++..++.+.++..++.++|.|. +...........+.++|++ ++
T Consensus 628 ~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~--~~ 705 (780)
T 3apo_A 628 SSKAYQYHSYNGWNRDAYSLRSWGLGFLPQASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARM--IK 705 (780)
T ss_dssp SSSCCSCEECCCSCCSHHHHHHHHHTTSCCCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHH--HT
T ss_pred CcCccchhhcCCCCCCHHHHHHHHhhhcccccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHH--hc
Confidence 33211111 233 4567789999999998889999988887766655666666664 4445677788899999999 76
Q ss_pred CCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCc--ceEeeccCCcccccccccccHHHHHHHhhhhhcC
Q psy12972 1126 HNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKK--IKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVND 1203 (1578)
Q Consensus 1126 ~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~--~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g 1203 (1578)
++ +.|++||.+..+++++.+ +. .++|.+++....+ .+|.=.. ....+.+.|..+|++.+..
T Consensus 706 ~~-~~~~~vd~~~~~~~~~~~-------~v-~~~Pt~~~~~~g~~~~~~~G~~--------~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 706 GK-VRAGKVDCQAYPQTCQKA-------GI-KAYPSVKLYQYERAKKSIWEEQ--------INSRDAKTIAALIYGKLET 768 (780)
T ss_dssp TT-CEEEEEETTTCHHHHHHT-------TC-CSSSEEEEEEEETTTTEEEEEE--------ECCCCHHHHHHHHHHHTTC
T ss_pred CC-ceEEEEECCCCHHHHHhc-------CC-CcCCEEEEEcCCCccccccCcc--------cCCcCHHHHHHHHHHHHHH
Confidence 65 999999999999999887 32 4677766553322 2232110 0124678899999988753
No 2
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=6.4e-32 Score=326.17 Aligned_cols=321 Identities=15% Similarity=0.185 Sum_probs=253.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCccccc---cc---HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQ---VE---PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS 928 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~---l~---p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~ 928 (1578)
+++||.+||++.+ +.+++++|.||||||+||+. +. |.|+++|+.+++.++.+++|||++++++|++|+|++
T Consensus 15 v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 15 VINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 5679999999977 34789999999999999733 22 699999999987679999999999999999999998
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhh-cccCCCcEEEEEeccCCchHHHHHHH-
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD-NWREDNKVHALLFQRSLPVRLRYLIN- 1006 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~-~~~~~~~~~VlfF~~~~~~~~~~~~~- 1006 (1578)
|||+++|++|+... |.|.++.+.|++|+.+++++++..+.+.+++++|++ +. +.++|+||.+..++....+..
T Consensus 92 -~PTl~~f~~G~~~~-y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~---~~~vv~ff~~~~~~~~~~f~~~ 166 (367)
T 3us3_A 92 -EDSIYVFKEDEVIE-YDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIED---EIKLIGYFKNKDSEHYKAFKEA 166 (367)
T ss_dssp -TTEEEEEETTEEEE-CCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCS---SCEEEEECSCTTCHHHHHHHHH
T ss_pred -CceEEEEECCcEEE-eCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCC---CcEEEEEECCCCchHHHHHHHH
Confidence 99999999998764 559999999999999999887666667788999997 43 678888888766666555544
Q ss_pred HhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1007 AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1007 a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
|..+++.+.|+.+ .+..++++|+++. |+|++|+...+.+..+ ..+..+...|.+||..+.+|+++++|.+++
T Consensus 167 A~~~~~~~~F~~~-----~~~~~~~~~~v~~--p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~~p~v~elt~~~~ 238 (367)
T 3us3_A 167 AEEFHPYIPFFAT-----FDSKVAKKLTLKL--NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHRRSTLRKLKPESM 238 (367)
T ss_dssp HHHHTTTSCEEEE-----CCHHHHHHHTCCT--TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTCSCSEEECCGGGH
T ss_pred HHhhcCCcEEEEE-----CCHHHHHHcCCCC--CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcCccceeecChhhH
Confidence 4467789999999 6788999999974 8999998755555444 222367788999999999999999999998
Q ss_pred hhhcCC-CCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcchHHH----HhccCCCCCCccccce
Q psy12972 1087 LDAVCP-VKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQPEFV----NALTSPEDSSEISLHI 1159 (1578)
Q Consensus 1087 ~~~~c~-~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~~~~----~~f~~~~~~~~~~~~l 1159 (1578)
.+..+. .++.+++++.+ +.++.+...+.|+++|++ |+++ .+.|+|+|++.++..+ +.| ++..++
T Consensus 239 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~--~~~~~ki~F~~id~~~~~~~l~~~~~~f-------gl~~~~ 309 (367)
T 3us3_A 239 YETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQD--NTDNPDLSIIWIDPDDFPLLVPYWEKTF-------DIDLSA 309 (367)
T ss_dssp HHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHH--TTTCTTCCEEEECGGGCTTTHHHHHHHH-------TCCTTS
T ss_pred HHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHH--cCCCCceEEEEECCccchhHHHHHHHhc-------CCCCCC
Confidence 776542 23344555554 444567888899999999 9885 5999999998887544 346 222468
Q ss_pred eEEEEEcCCcc--eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1160 AAMWRMDYKKI--KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1160 p~l~~~n~~~~--kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
|++++.|.++. +|..+++. ...+|.+.|..||+.+++|...
T Consensus 310 P~~~i~~~~~~~~~~y~~~~~------~~~~t~~~i~~F~~~~~~Gkl~ 352 (367)
T 3us3_A 310 PQIGVVNVTDADSVWMEMDDE------EDLPSAEELEDWLEDVLEGEIN 352 (367)
T ss_dssp CEEEEEETTTCCEEECCCCTT------SCCCCHHHHHHHHHHHHHTSSC
T ss_pred CeEEEEecccccceeecCCcc------cccCCHHHHHHHHHHHHcCCcC
Confidence 88888887764 33334331 1257999999999999999988
No 3
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.97 E-value=1.4e-30 Score=312.44 Aligned_cols=318 Identities=16% Similarity=0.179 Sum_probs=254.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHH-------HHHHHHHhCCCceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-------FKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~-------~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++++|.+||++.+ ..+++++|.||||||+ |+.++|. |+++|+.+++.++.+++|||+.++++|++|+|+
T Consensus 13 v~~l~~~~f~~~i---~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 13 VVSLTEKNFKQVL---KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CEEECHHHHHHHH---TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 4579999999977 4478999999999999 9999999 999999998766999999999999999999999
Q ss_pred ccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhh-cccCCCcEEEEEeccCCchHHHHHHH
Q psy12972 928 SQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLD-NWREDNKVHALLFQRSLPVRLRYLIN 1006 (1578)
Q Consensus 928 ~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~-~~~~~~~~~VlfF~~~~~~~~~~~~~ 1006 (1578)
+ +||+++|++|+.. .+.|.++.+.|++|+.+.+++++..+.+.++++++++ +. +.++|+||.+..++....+..
T Consensus 89 ~-~Pt~~~~~~g~~~-~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~---~~~vv~ff~~~~~~~~~~~~~ 163 (350)
T 1sji_A 89 E-EGSLYVLKGDRTI-EFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIED---QIKLIGFFKSEESEYYKAFEE 163 (350)
T ss_dssp S-TTEEEEEETTEEE-EECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCS---SCEEEEECSCTTSHHHHHHHH
T ss_pred c-cceEEEEECCcEE-EecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCC---CcEEEEEECCCCcHHHHHHHH
Confidence 8 9999999999854 4569999999999999999887666657788999987 54 667888887766665555544
Q ss_pred -HhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCC-CCchhhhhhhhcCCCCCCcccCch
Q psy12972 1007 -AFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-IPVPTLQDITDNNPYLTLPRISSQ 1084 (1578)
Q Consensus 1007 -a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~-l~~~~L~~fI~~nk~p~vpeLts~ 1084 (1578)
|..+++++.|+.+ .+++++++++++ .|++++|+...+.+..+ .++ .+...|.+|++.+.+|.++++|.+
T Consensus 164 ~A~~~~~~~~f~~~-----~~~~~~~~~~v~--~p~i~~~~~~~~~~~~y--~g~~~~~~~l~~fi~~~~~p~v~elt~~ 234 (350)
T 1sji_A 164 AAEHFQPYIKFFAT-----FDKGVAKKLSLK--MNEVDFYEPFMDEPIAI--PDKPYTEEELVEFVKEHQRPTLRRLRPE 234 (350)
T ss_dssp HHHHTTTTSEEEEE-----CCHHHHHHHTCC--TTCEEEECTTCSSCEEC--SSSSCCHHHHHHHHHHHCCCSEEECCTT
T ss_pred HHHhhccCcEEEEE-----CCHHHHHHcCCC--CCcEEEEeCCCCCceec--CCCCCCHHHHHHHHHHcCccchhhcChh
Confidence 4467789999999 678899999997 58999997654555433 333 677889999999999999999999
Q ss_pred hhhhhcCCC-CceEEEEEecC-CcchHHHHHHHHHHHhhccCCC-CcEEEEEEecCcchHHH----HhccCCCCCCcccc
Q psy12972 1085 SMLDAVCPV-KKLCVVLFSED-SPEHDASRHTLRRFAQESRFVH-NNIAFMYVFIEKQPEFV----NALTSPEDSSEISL 1157 (1578)
Q Consensus 1085 ~~~~~~c~~-~~lcVll~~~~-~~~~~~~~~~lr~vA~~~~~~~-~~v~F~~vd~~~q~~~~----~~f~~~~~~~~~~~ 1157 (1578)
+..+..-.. +++|++++... ..+.....+.|+++|++ +++ +.+.|+|+|++.++.++ +.| +...
T Consensus 235 ~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~--~~~~~~~~f~~id~~~~~~~~~~~~~~~-------gi~~ 305 (350)
T 1sji_A 235 DMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARD--NTDNPDLSIVWIDPDDFPLLVAYWEKTF-------KIDL 305 (350)
T ss_dssp THHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHH--GGGCSSCCEEEECGGGCHHHHHHHHHHC-------CSCT
T ss_pred hHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHH--hCCCCceEEEEECchhhHHHHHHHHhhc-------CCCc
Confidence 886643211 26788887643 23346788999999999 874 45999999999888877 666 2223
Q ss_pred ceeEEEEEcCCc-ceEee-ccCCcccccccccccHHHHHHHhhhhhcCCc
Q psy12972 1158 HIAAMWRMDYKK-IKYGW-LLGDAVDDWKDYNTTKDRLDAGLRSLVNDPY 1205 (1578)
Q Consensus 1158 ~lp~l~~~n~~~-~kY~~-l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~ 1205 (1578)
++|++++.|.++ .+|.. +.+. ....|.+.|..||+.+++|..
T Consensus 306 ~~P~~~i~~~~~~~~~~~~~~~~------~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 306 FKPQIGVVNVTDADSVWMEIPDD------DDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp TSCEEEEEESSSSCEEESCSSCC------SCCCCHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEecccccccccCCCcc------cccCCHHHHHHHHHHHhcCcc
Confidence 579998888755 47864 3321 235788999999999999974
No 4
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.97 E-value=9.5e-30 Score=308.94 Aligned_cols=329 Identities=13% Similarity=0.122 Sum_probs=230.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC-----CceEEEEEECccchhhHhHcCcccc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP-----LGVGFFTVHVHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-----~~v~~a~VDc~~~~~L~~k~gV~~~ 929 (1578)
++.||.++|++.+ ..+++++|.||||||+||+++.|.|+++|+.+++ .++.+++|||+.+.++|++|+|++
T Consensus 7 v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~- 82 (382)
T 2r2j_A 7 ITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK- 82 (382)
T ss_dssp -CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE-
T ss_pred eEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc-
Confidence 5679999999866 3468999999999999999999999999999952 239999999999999999999998
Q ss_pred CCcEEEEcCCcccc-ccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHH-H
Q psy12972 930 LPQIALLTDGRTSF-FKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-A 1007 (1578)
Q Consensus 930 ~PTl~lf~~G~~~~-y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~-a 1007 (1578)
+||+++|++|+... .+.|.++.+.|++|+.+.+++++..+.+.++++. +... ..++|+||.+...+....+.. |
T Consensus 83 ~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~---~~~~v~ff~~~~~~~~~~f~~~A 158 (382)
T 2r2j_A 83 YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRS---KRNIIGYFEQKDSDNYRVFERVA 158 (382)
T ss_dssp ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC----------------CCEEEEEESCSSSHHHHHHHHHH
T ss_pred CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCC---CCEEEEEECCCCChhHHHHHHHH
Confidence 99999999998764 3669999999999999999877655555667777 5443 667888998777776644444 4
Q ss_pred hhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCC-CchhhhhhhhcCCCCCCcccCchhh
Q psy12972 1008 FKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSI-PVPTLQDITDNNPYLTLPRISSQSM 1086 (1578)
Q Consensus 1008 ~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l-~~~~L~~fI~~nk~p~vpeLts~~~ 1086 (1578)
..+++++.|+.+.. ++.++++++. .| ++|+............+.+ +...|.+||+.+.+|.++++|.++.
T Consensus 159 ~~~~~~~~F~~~~~------~~~~~~~v~~-~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt~~~~ 229 (382)
T 2r2j_A 159 NILHDDCAFLSAFG------DVSKPERYSG-DN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREITFENG 229 (382)
T ss_dssp HHHTTTCEEEEEES------CC---------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECCHHHH
T ss_pred HHhhccceEEEEeh------hhHHhhCCCC-Cc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecChhhH
Confidence 56778899988832 4677788875 35 4554432222222334555 6778999999999999999999999
Q ss_pred hhhcCCCCceEEEEEecCC-cchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEE
Q psy12972 1087 LDAVCPVKKLCVVLFSEDS-PEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRM 1165 (1578)
Q Consensus 1087 ~~~~c~~~~lcVll~~~~~-~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~ 1165 (1578)
.+..|....+|++++..+. +..+...+.+.++|.+ ++++ +.|+|+|++.++.+++.|..+. .++|++++.
T Consensus 230 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~--~~~~-i~f~~id~~~~~~~~~~~gl~~------~~~P~i~i~ 300 (382)
T 2r2j_A 230 EELTEEGLPFLILFHMKEDTESLEIFQNEVARQLIS--EKGT-INFLHADCDKFRHPLLHIQKTP------ADCPVIAID 300 (382)
T ss_dssp HHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGG--GTTT-SEEEEEETTTTHHHHHHTTCCG------GGCSEEEEE
T ss_pred HHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHH--hCCe-eEEEEEchHHhHHHHHHcCCCc------cCCCEEEEE
Confidence 8888866678877776543 2234555667777777 7664 9999999999999999883322 367888888
Q ss_pred cCCcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhhh
Q psy12972 1166 DYKKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSL 1225 (1578)
Q Consensus 1166 n~~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~ 1225 (1578)
+..+ .|..... ...++.+.|..||+.+++|... |.+.+|..|..
T Consensus 301 ~~~~-~y~~~~~-------~~~~~~~~i~~F~~d~~~Gkl~--------p~~kse~~P~~ 344 (382)
T 2r2j_A 301 SFRH-MYVFGDF-------KDVLIPGKLKQFVFDLHSGKLH--------REFHHGPDPTD 344 (382)
T ss_dssp CSSC-EEECCCS-------GGGGSTTHHHHHHHHHHHTTTS--------SCC--------
T ss_pred cchh-cCCCCcc-------ccccCHHHHHHHHHHHHCCCcc--------ccccCCCCCCC
Confidence 8644 3532211 1134668899999999999998 66666655543
No 5
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.96 E-value=1.3e-28 Score=307.67 Aligned_cols=395 Identities=14% Similarity=0.215 Sum_probs=298.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.||.++|++.+...+.+++++|.||||||++|+++.|.|+++|+.+++. +.+++|||+.++++|++|+|++ +||++
T Consensus 3 v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Ptl~ 80 (481)
T 3f8u_A 3 VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTANTNTCNKYGVSG-YPTLK 80 (481)
T ss_dssp CEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTTCHHHHHHTTCCE-ESEEE
T ss_pred eEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHhcCCCC-CCEEE
Confidence 467999999998854444599999999999999999999999999999987 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHH-HhhcCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLIN-AFKHRTT 1013 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~-a~~~~~~ 1013 (1578)
+|++|+....+.|.++.+.|++|+.+++++++..+.+.++++++++.. +.++++||.+..+.....+.. |..++++
T Consensus 81 ~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~vv~~~~~~~~~~~~~f~~~a~~~~~~ 157 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDK---DASIVGFFDDSFSEAHSEFLKAASNLRDN 157 (481)
T ss_dssp EEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSS---SCEEEEEESCTTCHHHHHHHHHHHHHTTT
T ss_pred EEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcC---CcEEEEEECCCccchHHHHHHHHHHhccC
Confidence 999998777777999999999999999988877777888999999875 777888897666666555554 4467799
Q ss_pred eEEEEEEcccCCChhHHhhcCCCCCCcEEEEecc------CCCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhh
Q psy12972 1014 IVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKE------DKDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSML 1087 (1578)
Q Consensus 1014 v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~------~~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~ 1087 (1578)
+.|+.+ .+..++++|+++. +.+++|+. ..+.+..+ ..+.++...|.+||..+++|+++++|.++..
T Consensus 158 ~~F~~~-----~~~~~~~~~~v~~--~~i~~~~p~~~~~~~~~~~~~y-~~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~ 229 (481)
T 3f8u_A 158 YRFAHT-----NVESLVNEYDDNG--EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKD 229 (481)
T ss_dssp SCEEEE-----CCHHHHHHHCSSS--EEEEEECCGGGCBTTBCSEEEC-CCSSCCHHHHHHHHHHHTTTTSCEECTTTHH
T ss_pred ceEEEE-----CCHHHHHHhCCCC--CcEEEEecccccCccCCccccc-CCCCCCHHHHHHHHHHhCCCCccccChhHHH
Confidence 999999 7889999999975 45888872 12222222 2256677899999999999999999999876
Q ss_pred hhcCCCCceEEEEEecCCcch----HHHHHHHHHHHhhccCCCC--cEEEEEEecCcchHHHHhccCCCCCCccccceeE
Q psy12972 1088 DAVCPVKKLCVVLFSEDSPEH----DASRHTLRRFAQESRFVHN--NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAA 1161 (1578)
Q Consensus 1088 ~~~c~~~~lcVll~~~~~~~~----~~~~~~lr~vA~~~~~~~~--~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~ 1161 (1578)
... ...++++++..+.... +...+.++++|++ |+++ .+.|+|+|.+.....++.|.... ...++|.
T Consensus 230 ~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~--~~~k~~~i~F~~~D~~~~~~~l~~~gl~~----~~~~~P~ 301 (481)
T 3f8u_A 230 LIQ--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLES----TAGEIPV 301 (481)
T ss_dssp HHT--TSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCCC----CTTCSCE
T ss_pred Hhc--CCCceEEEEecccccchhhHHHHHHHHHHHHHH--hcCCCceEEEEEEcHHHHHHHHHHcCCCc----ccCCCcE
Confidence 654 3456666654332222 2357889999999 7654 39999999999999888884331 0136888
Q ss_pred EEEEcCCcceEeeccCCcccccccccccHH--HHHHHhhhhhcCCcccccccccccccccchhhhhHHHHHHHHHHHHHH
Q psy12972 1162 MWRMDYKKIKYGWLLGDAVDDWKDYNTTKD--RLDAGLRSLVNDPYNNLLYDTALKEISDEYIQSLGVRIFNRIFMHIEM 1239 (1578)
Q Consensus 1162 l~~~n~~~~kY~~l~~~~~~~~~~~~~t~e--~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~~~~R~~~~~~~~~~~ 1239 (1578)
+++.+.++.+|.+ ++ .+|.+ .|..|++.+++|... |.+.++..|..
T Consensus 302 ~~i~~~~~~ky~~-~~---------~~t~e~~~l~~f~~~~~~g~~~--------~~~~s~~~p~~-------------- 349 (481)
T 3f8u_A 302 VAIRTAKGEKFVM-QE---------EFSRDGKALERFLQDYFDGNLK--------RYLKSEPIPES-------------- 349 (481)
T ss_dssp EEEECSSSCEEEC-CS---------CCCTTSHHHHHHHHHHHHTCCC--------CCCCCCCCCSC--------------
T ss_pred EEEEcCCCcccCC-Cc---------ccCccHHHHHHHHHHHhcCCcc--------cccccCCCCCC--------------
Confidence 8888866678864 33 24556 899999999999988 55555555511
Q ss_pred HHHhhccccchhHHHHHHHHHHHHHHHHHHHHhcccccccCCCccccccccccccccccccccccceeeeeeccccccee
Q psy12972 1240 AQQSLSRQHILPAVSLIFTVIIIVVLAMIMNHYMKLEEEEIPSTTSSMRNHSVNKEKKHKETKQELKLHALRAETYNGLV 1319 (1578)
Q Consensus 1240 ~~~~~~~~~~l~~~s~~~~~~fi~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~y~~~~ 1319 (1578)
. .-.+..|++.+++..+
T Consensus 350 -------~--------------------------------------------------------~~~v~~~~~~~~~~~~ 366 (481)
T 3f8u_A 350 -------N--------------------------------------------------------DGPVKVVVAENFDEIV 366 (481)
T ss_dssp -------C--------------------------------------------------------CSSSEEECTTTHHHHH
T ss_pred -------C--------------------------------------------------------CCCeEEecccCHHHHh
Confidence 0 0026677777777766
Q ss_pred eecCCCceEEEEEE--cccchHHhHHHHhhceecccccceeeeEEEEecc
Q psy12972 1320 VLLKPGCRTLILFI--DNKSSRKLVSKFHAMVWPYRKNKSLMFGYLNIER 1367 (1578)
Q Consensus 1320 ~~lkpg~~~~vl~~--~~~s~~~ll~~f~~~v~~~~~~~~l~f~~l~~~k 1367 (1578)
. .+|.-.+|.+- .......+.+.+.+.---|.+...+.|..++.+.
T Consensus 367 ~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~ 414 (481)
T 3f8u_A 367 N--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA 414 (481)
T ss_dssp T--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS
T ss_pred h--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc
Confidence 3 34443333333 2335577777776665556666678888888877
No 6
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.96 E-value=1.3e-29 Score=282.02 Aligned_cols=204 Identities=26% Similarity=0.485 Sum_probs=165.2
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCCCCc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDSASR 715 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~~~~ 715 (1578)
.|+|++|||+++||.++||+|||+++++||||+++ ++.+.++|++|++||++|+||.+|+.||.+|..+.....
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~----- 76 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ----- 76 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC-----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc-----
Confidence 58999999999999999999999999999999996 678999999999999999999999999999876432111
Q ss_pred ccCCCCCCCcccccccCCCCCCcccccchhhccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhc
Q psy12972 716 NFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS 795 (1578)
Q Consensus 716 ~~~~~~~~~f~~~F~~~Fg~~f~~~~~~~~~k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk 795 (1578)
+..+..| .+|.+.||
T Consensus 77 ---~~~~~~~-~~~~~~fg------------------------------------------------------------- 91 (210)
T 3apq_A 77 ---GGQYESW-SYYRYDFG------------------------------------------------------------- 91 (210)
T ss_dssp ---SCCCCCH-HHHHHSSS-------------------------------------------------------------
T ss_pred ---ccccccc-cccccccc-------------------------------------------------------------
Confidence 0111111 11111110
Q ss_pred CCCcceeeeeecccCccccccCCccccccccccccCccccccccccccCccCcccceeEEEeeccccccceecccCCCCc
Q psy12972 796 PLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSEGFNFPFEEHDISLFHKLSTTHWNFEKNYIPKSYTTP 875 (1578)
Q Consensus 796 ~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~~~i~~~~vi~Lt~~nF~~~vl~~s~~~~ 875 (1578)
++.... .+..++.++|...+ ..+++
T Consensus 92 ----------------------------------------~~~~~~------------~v~~l~~~~f~~~~---~~~~~ 116 (210)
T 3apq_A 92 ----------------------------------------IYDDDP------------EIITLERREFDAAV---NSGEL 116 (210)
T ss_dssp ----------------------------------------TTTTCT------------TSEECCHHHHHHHH---HHSCC
T ss_pred ----------------------------------------ccCCCC------------ceEEecHHHHHHHH---ccCCc
Confidence 000000 02357788888876 34789
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHH
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMV 955 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~ 955 (1578)
++|.||++||++|+.+.|.|+++++.+.+. +.|+.|||+.++++|++|+|.+ +||+++|++|+....+.|.++.++|.
T Consensus 117 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~ 194 (210)
T 3apq_A 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGDDRMLCRMKGVNS-YPSLFIFRSGMAAVKYNGDRSKESLV 194 (210)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTTCHHHHHHTTCCS-SSEEEEECTTSCCEECCSCCCHHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCccHHHHHHcCCCc-CCeEEEEECCCceeEecCCCCHHHHH
Confidence 999999999999999999999999999875 9999999999999999999998 99999999999877778999999999
Q ss_pred HHHHhhCCCccc
Q psy12972 956 EFFRLKLPYKLI 967 (1578)
Q Consensus 956 ~fi~~~lp~~vv 967 (1578)
+|+.+.+++.+.
T Consensus 195 ~~i~~~l~~~~~ 206 (210)
T 3apq_A 195 AFAMQHVRSTVT 206 (210)
T ss_dssp HHHHHHHHCCSS
T ss_pred HHHHHhCcccce
Confidence 999998876543
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.95 E-value=3.4e-27 Score=296.82 Aligned_cols=316 Identities=13% Similarity=0.150 Sum_probs=242.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|++.+ +.+++++|.||||||+||+++.|.|+++|+.+++.++.+++|||+.++++|++|+|++ +||++
T Consensus 16 v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 91 (504)
T 2b5e_A 16 VVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG-FPSLK 91 (504)
T ss_dssp CEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCc-CCEEE
Confidence 5579999999976 4578999999999999999999999999999987669999999999999999999998 99999
Q ss_pred EEcCCcc--ccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCC--cEEEEEeccCCchHH-HHHHHHhh
Q psy12972 935 LLTDGRT--SFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDN--KVHALLFQRSLPVRL-RYLINAFK 1009 (1578)
Q Consensus 935 lf~~G~~--~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~--~~~VlfF~~~~~~~~-~~~~~a~~ 1009 (1578)
+|++|+. ...+.|.++.+.|.+|+.+.+++++.. ++. +++|++.. + .++|+||.+..+... .+...|..
T Consensus 92 ~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~-i~~--~~~~~~~~---~~~~~~v~~f~~~~~~~~~~f~~~A~~ 165 (504)
T 2b5e_A 92 IFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAV-VAD--LPAYLANE---TFVTPVIVQSGKIDADFNATFYSMANK 165 (504)
T ss_dssp EEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEE-CSC--HHHHHHHS---CCSSCEEEEEESCCHHHHHHHHHHHHH
T ss_pred EEeCCccccceeecCCCCHHHHHHHHHHhcCCccee-HHH--HHHHHhcC---CCceEEEEEeCCCCchHHHHHHHHHHH
Confidence 9999986 666679999999999999999876444 444 89999875 5 788999987554444 44445557
Q ss_pred cCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCC-C---CchhhhhhhhcCCCCCCcccCchh
Q psy12972 1010 HRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNS-I---PVPTLQDITDNNPYLTLPRISSQS 1085 (1578)
Q Consensus 1010 ~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~-l---~~~~L~~fI~~nk~p~vpeLts~~ 1085 (1578)
+++.+.|+++. +++++++++ +++|+... .+..+ .+. + +...|.+||..+.+|.++++|.++
T Consensus 166 ~~~~~~F~~~~-------~~~~~~~~~-----i~l~~~~~-~~~~~--~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~ 230 (504)
T 2b5e_A 166 HFNDYDFVSAE-------NADDDFKLS-----IYLPSAMD-EPVVY--NGKKADIADADVFEKWLQVEALPYFGEIDGSV 230 (504)
T ss_dssp TTTTCEEEEEE-------CTTSCCEEE-----EEETTEEE-EEEEC--CSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHH
T ss_pred hhcCcEEEEEH-------HHHHhcCCe-----EEecCCCC-ccccc--CCcccccCCHHHHHHHHHhcccCCcccCCHhH
Confidence 88999999983 466777763 77776532 22222 233 3 667899999999999999999988
Q ss_pred hhhhcCCCCceEEEEEecCCcchHHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEE
Q psy12972 1086 MLDAVCPVKKLCVVLFSEDSPEHDASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRM 1165 (1578)
Q Consensus 1086 ~~~~~c~~~~lcVll~~~~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~ 1165 (1578)
+..... .+...++++.......+.....++++|++ ++++ +.|+|+|.+.++++++.|.. . .++|.+++.
T Consensus 231 ~~~~~~-~~~~~~~l~~~~~~~~~~~~~~l~~~a~~--~~~~-i~F~~id~~~~~~~~~~~gl-~------~~~P~v~i~ 299 (504)
T 2b5e_A 231 FAQYVE-SGLPLGYLFYNDEEELEEYKPLFTELAKK--NRGL-MNFVSIDARKFGRHAGNLNM-K------EQFPLFAIH 299 (504)
T ss_dssp HHHHHH-TTSCEEEEEESSHHHHHHHHHHHHHHHHH--TTTT-CEEEEEEHHHHTTHHHHTTC-C------SCSSEEEEE
T ss_pred HHHHhc-CCCcEEEEEecCcccHHHHHHHHHHHHHh--cCCe-eEEEEEehhhhHHHHHHcCC-c------ccCCEEEEE
Confidence 765543 33333333333333446788899999999 8876 99999999999999998843 2 467888888
Q ss_pred cCCc-ceEeecc-CCcc--cccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1166 DYKK-IKYGWLL-GDAV--DDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1166 n~~~-~kY~~l~-~~~~--~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
+..+ .+|.+.. +++. ..-....+|.+.|..|++.++.|...
T Consensus 300 ~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~ 344 (504)
T 2b5e_A 300 DMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDAS 344 (504)
T ss_dssp ETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCC
T ss_pred eCCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCC
Confidence 8744 6786432 1100 00011236889999999999999887
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.92 E-value=5.7e-25 Score=290.83 Aligned_cols=296 Identities=14% Similarity=0.161 Sum_probs=210.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+.. .+++++|.||||||+||+++.|.|+++|+.+++. +.++.++.+. +|...++.+
T Consensus 444 ~l~~~~~~~~-----~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~~~~~~~~~~v~~-------- 509 (780)
T 3apo_A 444 TLGPQNFPAS-----DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTIHEGLCNMYNIQA-------- 509 (780)
T ss_dssp ECCTTTSCTT-----CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS--------
T ss_pred ecCHHHHHHc-----CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc--------
Confidence 4455566554 5789999999999999999999999999999753 3333333222 444444444
Q ss_pred cccccCccccccccccccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHH
Q psy12972 826 HNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI 894 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~ 894 (1578)
+|++.++..+....+.+ +.+..+ .+..++.++|++.+...+.+.+|+|.||+|||+||+++.|.
T Consensus 510 -----~Pt~~~~~~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~ 584 (780)
T 3apo_A 510 -----YPTTVVFNQSSIHEYEGHHSAEQILEFIEDLRNPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPE 584 (780)
T ss_dssp -----SSEEEEEETTEEEEECSCSCHHHHHHHHHHHHSCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHH
T ss_pred -----CCeEEEEcCCceeeecCcccHHHHHHHHHhhcccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHH
Confidence 48877776543222222 222221 34678899999988665557899999999999999999999
Q ss_pred HHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcc----ccccCC-CCCHHHHHHHHHhhCCCccccc
Q psy12972 895 FKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRT----SFFKEP-SFSVQKMVEFFRLKLPYKLIVP 969 (1578)
Q Consensus 895 ~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~----~~y~~G-~~s~~~L~~fi~~~lp~~vv~~ 969 (1578)
|+++|+.+++. +.|++|||+.+..+|++++|++ ||||++|+.|.. ...|.| .++.++|.+|+.+.+++. +..
T Consensus 585 ~~~lA~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~-v~~ 661 (780)
T 3apo_A 585 WKRMARTLTGL-INVGSVDCGQYHSFCTQENVQR-YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQA-SID 661 (780)
T ss_dssp HHHHHHHHTTT-SEEEEEETTTTHHHHHHTTCCS-SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCC-SEE
T ss_pred HHHHHHHhhCC-eEEEEEECcchHHHHHHcCCCC-CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccc-ccc
Confidence 99999999985 9999999999999999999998 999999987653 233468 899999999999998765 455
Q ss_pred cccccHHHHhhcccCCCcEEEEEeccCCchHHHH-----HHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEE
Q psy12972 970 LSATNVDAFLDNWREDNKVHALLFQRSLPVRLRY-----LINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLI 1044 (1578)
Q Consensus 970 it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~-----~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllv 1044 (1578)
++.+++++.+... ++++++.|.....++... ...+..+.+++.|+.+++ ..+..++++|+|.+ .|++++
T Consensus 662 l~~~~~~~~~~~~---~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~--~~~~~~~~~~~v~~-~Pt~~~ 735 (780)
T 3apo_A 662 LTPQTFNEKVLQG---KTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDC--QAYPQTCQKAGIKA-YPSVKL 735 (780)
T ss_dssp ECHHHHHHHTTTC---SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEET--TTCHHHHHHTTCCS-SSEEEE
T ss_pred CCHHHHHHHHhcC---CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEEC--CCCHHHHHhcCCCc-CCEEEE
Confidence 6778887655443 555666663333222211 122334556788888855 46788999999986 579999
Q ss_pred eccCCCCCcccccc--CCCCchhhhhhhhcC
Q psy12972 1045 FKEDKDRPSASITM--NSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1045 fk~~~~~~~~~l~~--~~l~~~~L~~fI~~n 1073 (1578)
|+++.... .+... +..+...+.+|++..
T Consensus 736 ~~~g~~~~-~~~G~~~g~~~~~~l~~~l~~~ 765 (780)
T 3apo_A 736 YQYERAKK-SIWEEQINSRDAKTIAALIYGK 765 (780)
T ss_dssp EEEETTTT-EEEEEEECCCCHHHHHHHHHHH
T ss_pred EcCCCccc-cccCcccCCcCHHHHHHHHHHH
Confidence 96543321 11111 245667788888765
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.90 E-value=1.8e-24 Score=244.54 Aligned_cols=197 Identities=22% Similarity=0.373 Sum_probs=153.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|+..+ .++++++|.||||||++|+++.|.|+++++.+++.+ +.++.++.+. +|+..++.+.
T Consensus 18 ~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~---- 90 (241)
T 3idv_A 18 LVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY---- 90 (241)
T ss_dssp EEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS----
T ss_pred EEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC----
Confidence 456667888776 346899999999999999999999999999998764 4444443332 4455555444
Q ss_pred ccccccccCccccccccccccCccC----cccce--------------eEEEeeccccccceecccCCCCcEEEEEEcCC
Q psy12972 823 RNFHNHMYNPFDDVFSEGFNFPFEE----HDISL--------------FHKLSTTHWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~--------------~~vi~Lt~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
||+.++..|-...+.+ ..+.. ..+..++.++|++.+ ..+++++|.||++|
T Consensus 91 ---------Pt~~~~~~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~f~a~w 158 (241)
T 3idv_A 91 ---------PTIKILKKGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVV---NDADIILVEFYAPW 158 (241)
T ss_dssp ---------SEEEEEETTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHH---HHCSEEEEEEECTT
T ss_pred ---------CEEEEEcCCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhh---ccCCeEEEEEECCC
Confidence 8877776543222222 11111 123468888998876 34679999999999
Q ss_pred CcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 885 CFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+.+.|.|.++|+.+.+.+ +.++.|||+.++++|++|+|.+ +||+++|++|+.+. +.|.++.++|.+|+.+++
T Consensus 159 C~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 159 CGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSG-YPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp CTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-SSEEEEEETTEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred CHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc-cCEEEEEECCeEEE-ecCCCCHHHHHHHHHhhh
Confidence 9999999999999999986543 9999999999999999999998 99999999998877 569999999999999988
Q ss_pred CCc
Q psy12972 963 PYK 965 (1578)
Q Consensus 963 p~~ 965 (1578)
.+.
T Consensus 237 ~~~ 239 (241)
T 3idv_A 237 GAA 239 (241)
T ss_dssp TCT
T ss_pred CCC
Confidence 653
No 10
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.6e-22 Score=237.01 Aligned_cols=226 Identities=17% Similarity=0.219 Sum_probs=181.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc--cchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~PT 932 (1578)
+++||.++|++.+.. .+++++|.|||+||++|+.+.|.|+++++.+.+. +.++.|||+ .+.++|++|+|.+ +||
T Consensus 19 vv~lt~~~f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~~~~~~l~~~~~I~~-~Pt 94 (298)
T 3ed3_A 19 ISELTPKSFDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDLNKNKALCAKYDVNG-FPT 94 (298)
T ss_dssp CEECCHHHHHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTSTTTHHHHHHTTCCB-SSE
T ss_pred eEEeCHHHHHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccCccCHHHHHhCCCCc-cce
Confidence 568999999998843 4789999999999999999999999999999876 999999998 6789999999998 999
Q ss_pred EEEEcCCc-----------------cccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEecc
Q psy12972 933 IALLTDGR-----------------TSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQR 995 (1578)
Q Consensus 933 l~lf~~G~-----------------~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~ 995 (1578)
+++|++|+ ....|.|.++.+.|++|+.+++++.+..+.+.+++++|++.. +.+.|++|++
T Consensus 95 ~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~---~~~~vi~fs~ 171 (298)
T 3ed3_A 95 LMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKS---PKLSVVLFSK 171 (298)
T ss_dssp EEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSC---SSEEEEEEES
T ss_pred EEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcC---CceEEEEEcC
Confidence 99999886 244567999999999999999988777766778899999875 6788888987
Q ss_pred CCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcC-----C------------CCCCcEEEEeccCCCCCcccccc
Q psy12972 996 SLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFK-----V------------PGDKDSLLIFKEDKDRPSASITM 1058 (1578)
Q Consensus 996 ~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~-----V------------~~~~Ptllvfk~~~~~~~~~l~~ 1058 (1578)
.......+...|..+++++.|+.+.........-.++++ | ....|+|++|+...+++..+-.
T Consensus 172 ~~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g- 250 (298)
T 3ed3_A 172 QDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEG- 250 (298)
T ss_dssp SSSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCC-
T ss_pred CCcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEecc-
Confidence 777677777778889999999999533221110002222 2 1347899999776566655432
Q ss_pred CCCCchhhhhhhh--cCCCCCCcccCchhhhh
Q psy12972 1059 NSIPVPTLQDITD--NNPYLTLPRISSQSMLD 1088 (1578)
Q Consensus 1059 ~~l~~~~L~~fI~--~nk~p~vpeLts~~~~~ 1088 (1578)
+.++...|.+||. .++.|.+++||.++.+.
T Consensus 251 ~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 251 NSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp SSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred ccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 5578889999999 89999999999866443
No 11
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.88 E-value=5.6e-22 Score=247.74 Aligned_cols=404 Identities=14% Similarity=0.165 Sum_probs=266.8
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc-cCccccccCCccccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL-FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~ 825 (1578)
..++..||++.+...+.+++|+|+||||||+||++++|+|+++|+.+++. .++.++|.... +|+..++.++
T Consensus 4 ~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~------- 76 (481)
T 3f8u_A 4 LELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGY------- 76 (481)
T ss_dssp EEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEE-------
T ss_pred EEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCC-------
Confidence 46778899999866556699999999999999999999999999999985 44555553332 5555555554
Q ss_pred cccccCcccccccccc-ccCccC----ccccee-------EEEee-ccccccceecccCCCCcEEEEEEcCCCccccccc
Q psy12972 826 HNHMYNPFDDVFSEGF-NFPFEE----HDISLF-------HKLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVE 892 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~~-~~~~~~----~~i~~~-------~vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~ 892 (1578)
||+.+|..|- ...+.+ +.+..+ .+..+ +.+++++.+ +.++.++|.||.++|..| .
T Consensus 77 ------Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~vv~~~~~~~~~~---~ 144 (481)
T 3f8u_A 77 ------PTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFI---SDKDASIVGFFDDSFSEA---H 144 (481)
T ss_dssp ------SEEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHT---TSSSCEEEEEESCTTCHH---H
T ss_pred ------CEEEEEeCCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHH---hcCCcEEEEEECCCccch---H
Confidence 8988888662 223333 222222 12344 455666655 447889999999987765 5
Q ss_pred HHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc--------CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 893 PIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT--------DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 893 p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~--------~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+.|.++|..+.+. +.|+.+ .+.+++++++++. .| +++|+ ++....|..|..+.++|.+||....-|
T Consensus 145 ~~f~~~a~~~~~~-~~F~~~---~~~~~~~~~~v~~-~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDN-YRFAHT---NVESLVNEYDDNG-EG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTT-SCEEEE---CCHHHHHHHCSSS-EE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccC-ceEEEE---CCHHHHHHhCCCC-Cc-EEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 7899999999775 888865 4678999999986 44 88887 334445544889999999999877643
Q ss_pred ccccccccccHHHHhhcccCCCcEEEEEeccC-CchH-----HH-HHHHHhhcCCC---eEEEEEEcccCCChhHHhhcC
Q psy12972 965 KLIVPLSATNVDAFLDNWREDNKVHALLFQRS-LPVR-----LR-YLINAFKHRTT---IVFGVIVYDQEDSSSVFQRFK 1034 (1578)
Q Consensus 965 ~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~-~~~~-----~~-~~~~a~~~~~~---v~Fg~v~~~~~~~~~l~~kf~ 1034 (1578)
++..+|.+++..+.+. ..++++++.+. .... .. ....|..++++ +.|++++ .......++.||
T Consensus 219 -~v~e~t~~n~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D--~~~~~~~l~~~g 291 (481)
T 3f8u_A 219 -ICPHMTEDNKDLIQGK----DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVAS--RKTFSHELSDFG 291 (481)
T ss_dssp -TSCEECTTTHHHHTTS----SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE--TTTTHHHHGGGT
T ss_pred -CccccChhHHHHhcCC----CceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEc--HHHHHHHHHHcC
Confidence 4777888998888744 33333332221 1221 11 12233355555 9999985 445677888999
Q ss_pred CCC---CCcEEEEeccCCCCCccccccCCCCch--hhhhhhhcC------------CC-----CCCcccCchhhhhhcCC
Q psy12972 1035 VPG---DKDSLLIFKEDKDRPSASITMNSIPVP--TLQDITDNN------------PY-----LTLPRISSQSMLDAVCP 1092 (1578)
Q Consensus 1035 V~~---~~Ptllvfk~~~~~~~~~l~~~~l~~~--~L~~fI~~n------------k~-----p~vpeLts~~~~~~~c~ 1092 (1578)
+.. ..|.++++..+.. .+...+.++.. .|.+|++.- .. ..+..++..++.+.+-.
T Consensus 292 l~~~~~~~P~~~i~~~~~~---ky~~~~~~t~e~~~l~~f~~~~~~g~~~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~ 368 (481)
T 3f8u_A 292 LESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNN 368 (481)
T ss_dssp CCCCTTCSCEEEEECSSSC---EEECCSCCCTTSHHHHHHHHHHHHTCCCCCCCCCCCCSCCCSSSEEECTTTHHHHHTC
T ss_pred CCcccCCCcEEEEEcCCCc---ccCCCcccCccHHHHHHHHHHHhcCCcccccccCCCCCCCCCCeEEecccCHHHHhhc
Confidence 972 4789999853221 12222455556 677776532 11 12334555565555543
Q ss_pred CCceEEEEEe-cCCcchHHHHHHHHHHHhhccCCCC-cEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcc
Q psy12972 1093 VKKLCVVLFS-EDSPEHDASRHTLRRFAQESRFVHN-NIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKI 1170 (1578)
Q Consensus 1093 ~~~lcVll~~-~~~~~~~~~~~~lr~vA~~~~~~~~-~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~ 1170 (1578)
.++.++|.|- +-...+......+.+++++ +.++ .+.|+.||.+.. ++...+ +. .++|.++..+..+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~--~~~~~~v~~~~id~~~~-~~~~~~-------~v-~~~Pt~~~~~~~~~ 437 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEK--LSKDPNIVIAKMDATAN-DVPSPY-------EV-RGFPTIYFSPANKK 437 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHH--TTTCSSEEEEEEETTSS-CCCTTC-------CC-CSSSEEEEECTTCT
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHH--hccCCCEEEEEEECCch-hhHhhC-------CC-cccCEEEEEeCCCe
Confidence 3466666664 4456678888899999999 7664 599999998765 443333 22 57888887775543
Q ss_pred -eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1171 -KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1171 -kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
.-..+.|. .+.+.+..+|++....+..
T Consensus 438 ~~~~~~~G~---------~~~~~l~~~l~~~~~~~~~ 465 (481)
T 3f8u_A 438 LNPKKYEGG---------RELSDFISYLQREATNPPV 465 (481)
T ss_dssp TSCEECCSC---------CSHHHHHHHHHHHCSSCCC
T ss_pred EeeeEeCCC---------CCHHHHHHHHHHhcCCccc
Confidence 22234443 5778899999988776554
No 12
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.83 E-value=2.7e-20 Score=224.56 Aligned_cols=296 Identities=14% Similarity=0.106 Sum_probs=196.5
Q ss_pred ccccccccccccccCCccCccceecccccccccc---ccch---HHHHHHHHHhcCCCcceeeeeecc---cCccccccC
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFAC---LQVE---PIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSG 817 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghC---k~La---P~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g 817 (1578)
.+.++..||++.+ .++++|||+||||||||| ++|+ |+|+++|+.+++.++.++.++++. +|+..++.+
T Consensus 15 v~~lt~~~f~~~i---~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~ 91 (367)
T 3us3_A 15 VINVNAKNYKNVF---KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTE 91 (367)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCS
T ss_pred cEECCHHHHHHHH---hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCc
Confidence 4567888999887 457899999999999996 3333 799999999987554443333322 566666655
Q ss_pred CccccccccccccCccccccccccccCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCCC
Q psy12972 818 QDSASRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDWC 885 (1578)
Q Consensus 818 ~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~FyapwC 885 (1578)
+ ||+.+|..|....|.+ ..+..+ .+..++ .+++++.+. ..+++++|.||++||
T Consensus 92 ~-------------PTl~~f~~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~--~~~~~~vv~ff~~~~ 156 (367)
T 3us3_A 92 E-------------DSIYVFKEDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFEN--IEDEIKLIGYFKNKD 156 (367)
T ss_dssp T-------------TEEEEEETTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHH--CCSSCEEEEECSCTT
T ss_pred C-------------ceEEEEECCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhc--cCCCcEEEEEECCCC
Confidence 5 9999988764333333 233322 223554 467776552 135889999999986
Q ss_pred cccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC--CccccccCC-CCCHHHHHHHHHhhC
Q psy12972 886 FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD--GRTSFFKEP-SFSVQKMVEFFRLKL 962 (1578)
Q Consensus 886 g~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~--G~~~~y~~G-~~s~~~L~~fi~~~l 962 (1578)
+ ...+.|.++|..+.+. +.|+.++ +.++|++|+|++ |+|++|+. +....| .| .++.++|.+||....
T Consensus 157 ~---~~~~~f~~~A~~~~~~-~~F~~~~---~~~~~~~~~v~~--p~i~lf~~~~~~~~~y-~g~~~~~~~l~~fi~~~~ 226 (367)
T 3us3_A 157 S---EHYKAFKEAAEEFHPY-IPFFATF---DSKVAKKLTLKL--NEIDFYEAFMEEPVTI-PDKPNSEEEIVNFVEEHR 226 (367)
T ss_dssp C---HHHHHHHHHHHHHTTT-SCEEEEC---CHHHHHHHTCCT--TCEEEECTTCSSCEEC-SSSSCCHHHHHHHHHHTC
T ss_pred c---hHHHHHHHHHHhhcCC-cEEEEEC---CHHHHHHcCCCC--CeEEEEcCCCCCCeec-CCCCCCHHHHHHHHHHcC
Confidence 6 4568999999999875 8899874 468999999974 99999987 334455 46 599999999998877
Q ss_pred CCccccccccccHHHHhhcccCCCcEEEEEeccCCchH----HHHHH-HHhhcCC--CeEEEEEEcccCCCh--hHHhhc
Q psy12972 963 PYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR----LRYLI-NAFKHRT--TIVFGVIVYDQEDSS--SVFQRF 1033 (1578)
Q Consensus 963 p~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~----~~~~~-~a~~~~~--~v~Fg~v~~~~~~~~--~l~~kf 1033 (1578)
.| ++..+|.+++.++..+. ...+.+++|-+...+. ...+. .|.+++. ++.|++++.+..... .+.+.|
T Consensus 227 ~p-~v~elt~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~f 303 (367)
T 3us3_A 227 RS-TLRKLKPESMYETWEDD--MDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTF 303 (367)
T ss_dssp SC-SEEECCGGGHHHHHHSC--BTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHH
T ss_pred cc-ceeecChhhHHHHHhhc--cCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhc
Confidence 54 57788888887776542 1334444454333221 22222 3345666 699999966542211 123568
Q ss_pred CCCCCCcEEEEeccCCCCCccc-ccc--CCCCchhhhhhhhcC
Q psy12972 1034 KVPGDKDSLLIFKEDKDRPSAS-ITM--NSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1034 ~V~~~~Ptllvfk~~~~~~~~~-l~~--~~l~~~~L~~fI~~n 1073 (1578)
++....|++++++........+ +.. +.++...|.+|++.-
T Consensus 304 gl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~ 346 (367)
T 3us3_A 304 DIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDV 346 (367)
T ss_dssp TCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHH
Confidence 9986679999996432211112 111 357778888887654
No 13
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.83 E-value=8.6e-22 Score=220.72 Aligned_cols=182 Identities=14% Similarity=0.178 Sum_probs=133.7
Q ss_pred cCccceeccccc-cccccccchHHHHHHHHHhcCCCcceeeeee--c-ccCccccccCCccccccccccccCcccccccc
Q psy12972 764 YTTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHY--D-LFGTTDGFSGQDSASRNFHNHMYNPFDDVFSE 839 (1578)
Q Consensus 764 ~~~~~lV~FYAp-wCghCk~LaP~weklA~~Lk~~~vg~v~~~~--~-~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~ 839 (1578)
.+.+++|.|||| ||+||+++.|.|+++|+......+..++|.. + .+|...++.+. ||+.+|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~-------------Pt~~~~~~ 87 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRA-------------PATTITQD 87 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSS-------------SEEEEEET
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcC-------------ceEEEEcC
Confidence 456778999999 9999999999999999753323444444432 1 14444455444 88888754
Q ss_pred ccc--cCccC----ccccee---------EEEeeccccccceecccCCCCcE-EEEEEcCCCcccccccHHHHHHHHHhC
Q psy12972 840 GFN--FPFEE----HDISLF---------HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMDELS 903 (1578)
Q Consensus 840 ~~~--~~~~~----~~i~~~---------~vi~Lt~~nF~~~vl~~s~~~~~-LV~FyapwCg~Ck~l~p~~~~lA~~l~ 903 (1578)
|-. ..+.+ .....+ ....++.++|+... ..++++ +|.||++||++|+.+.|.|++++..+.
T Consensus 88 g~~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 88 GKDFGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDETKQAIR---NIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp TBCCSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHT---TCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred CceeeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH---hcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 421 12222 111111 11346666666543 235566 999999999999999999999999986
Q ss_pred C---CceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 904 P---LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 904 ~---~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+ .++.++.||++.++++|++|+|.+ +||+++|++|+....+.|.++.++|.+|+.+.+
T Consensus 165 ~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 165 KAGKGKILGDMVEAIEYPEWADQYNVMA-VPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HTTCCCEEEEEEEGGGCHHHHHHTTCCS-SCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEcccCHHHHHhCCCcc-cCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 2 239999999999999999999998 999999999988777779999999999998653
No 14
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.82 E-value=6.1e-20 Score=220.10 Aligned_cols=294 Identities=14% Similarity=0.116 Sum_probs=194.9
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHH-------HHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPI-------FKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~-------weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
...++..||++.+. ++++|+|+||||||| |++++|+ |+++|+.+++.++.++.++++. +|+..++.
T Consensus 13 v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~ 88 (350)
T 1sji_A 13 VVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFD 88 (350)
T ss_dssp CEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCC
T ss_pred cEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCC
Confidence 34577788998773 478999999999999 9999999 9999999987544443333322 55555555
Q ss_pred CCccccccccccccCccccccccccccCccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCC
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFSEGFNFPFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~~~~~~~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
++ ||+.+|..|....+.+ +.+..+ .+..++ .+++++.+.. .+++++|.||++|
T Consensus 89 ~~-------------Pt~~~~~~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~--~~~~~vv~ff~~~ 153 (350)
T 1sji_A 89 EE-------------GSLYVLKGDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERI--EDQIKLIGFFKSE 153 (350)
T ss_dssp ST-------------TEEEEEETTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHC--CSSCEEEEECSCT
T ss_pred cc-------------ceEEEEECCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhcc--CCCcEEEEEECCC
Confidence 54 8888887654323333 222222 234453 4567665420 3568899999998
Q ss_pred CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC-ccccccCCC-CCHHHHHHHHHhhC
Q psy12972 885 CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG-RTSFFKEPS-FSVQKMVEFFRLKL 962 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G-~~~~y~~G~-~s~~~L~~fi~~~l 962 (1578)
|.. ..+.|.++|..+++. +.|+.++ ++++|++++|+ +|++++|+++ .....|.|. ++.++|.+|+....
T Consensus 154 ~~~---~~~~~~~~A~~~~~~-~~f~~~~---~~~~~~~~~v~--~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 224 (350)
T 1sji_A 154 ESE---YYKAFEEAAEHFQPY-IKFFATF---DKGVAKKLSLK--MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQ 224 (350)
T ss_dssp TSH---HHHHHHHHHHHTTTT-SEEEEEC---CHHHHHHHTCC--TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHC
T ss_pred CcH---HHHHHHHHHHhhccC-cEEEEEC---CHHHHHHcCCC--CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcC
Confidence 654 468999999999775 8999874 56799999996 8999999863 333344575 99999999998876
Q ss_pred CCccccccccccHHHHhhcccCCCcEEEEEeccCCchH----HHHHH-HHhhcCC--CeEEEEEEcccCCChhHH----h
Q psy12972 963 PYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVR----LRYLI-NAFKHRT--TIVFGVIVYDQEDSSSVF----Q 1031 (1578)
Q Consensus 963 p~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~----~~~~~-~a~~~~~--~v~Fg~v~~~~~~~~~l~----~ 1031 (1578)
-| .+..+|.+++..+.++. .+..++++ |.....+. ...+. .|.+++. ++.|++++.+ ....++ +
T Consensus 225 ~p-~v~elt~~~~~~~~~~~-~~~~~~l~-f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~--~~~~~~~~~~~ 299 (350)
T 1sji_A 225 RP-TLRRLRPEDMFETWEDD-LNGIHIVA-FAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD--DFPLLVAYWEK 299 (350)
T ss_dssp CC-SEEECCTTTHHHHHHSC-SSSEEEEE-ECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG--GCHHHHHHHHH
T ss_pred cc-chhhcChhhHHHHhcCC-CCCcEEEE-EEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch--hhHHHHHHHHh
Confidence 54 47788999998887652 11234444 54433321 22222 2335554 7889998644 455666 7
Q ss_pred hcCCCCCCcEEEEeccCCCCCccc-cc--cCCCCchhhhhhhhcC
Q psy12972 1032 RFKVPGDKDSLLIFKEDKDRPSAS-IT--MNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1032 kf~V~~~~Ptllvfk~~~~~~~~~-l~--~~~l~~~~L~~fI~~n 1073 (1578)
.|++....|++++++........+ +. .+.++...|.+|++.-
T Consensus 300 ~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~ 344 (350)
T 1sji_A 300 TFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDV 344 (350)
T ss_dssp HCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHH
T ss_pred hcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHH
Confidence 899985468999996522211111 11 2356667888887653
No 15
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.79 E-value=2.7e-20 Score=209.27 Aligned_cols=176 Identities=10% Similarity=0.071 Sum_probs=129.2
Q ss_pred Cccceeccc-----cccccccccchHHHHHHHHHhcC--C-Ccceeeeeecc-cCccccccCCccccccccccccCcccc
Q psy12972 765 TTPHLILFY-----SDWCFACLQVEPIFKKLMDELSP--L-GVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYNPFDD 835 (1578)
Q Consensus 765 ~~~~lV~FY-----ApwCghCk~LaP~weklA~~Lk~--~-~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~Ptik 835 (1578)
.++++|.|| +|||+||+++.|+|+++|+.+.+ . .++.++|..+. +|+..+++++ ||+.
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~-------------Ptl~ 86 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRV-------------PTIV 86 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBS-------------SEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcC-------------cEEE
Confidence 456666666 99999999999999999998843 2 33333333222 5555555555 8888
Q ss_pred ccccc-----cccCccCccccee---------EEEeeccccccceecccCCCCcE-EEEEEcCCCcccccccHHHHHHHH
Q psy12972 836 VFSEG-----FNFPFEEHDISLF---------HKLSTTHWNFEKNYIPKSYTTPH-LILFYSDWCFACLQVEPIFKKLMD 900 (1578)
Q Consensus 836 lf~~~-----~~~~~~~~~i~~~---------~vi~Lt~~nF~~~vl~~s~~~~~-LV~FyapwCg~Ck~l~p~~~~lA~ 900 (1578)
+|+.+ |.+......+..+ ....++.++|+..+ +.++++ +|.||++||++|+.+.|.|++++.
T Consensus 87 ~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~ 163 (229)
T 2ywm_A 87 IEGDKDYGIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQ---VVDIPIEIWVFVTTSCGYCPSAAVMAWDFAL 163 (229)
T ss_dssp EESSSCCCEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHT---TCCSCEEEEEEECTTCTTHHHHHHHHHHHHH
T ss_pred EECCCcccceecCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHH---hcCCCeEEEEEECCCCcchHHHHHHHHHHHH
Confidence 88643 1122222222111 12467778887754 234555 889999999999999999999999
Q ss_pred HhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 901 ELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 901 ~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
.+. ++.++.||++.++++|++|+|.+ +||+++ +|+ +..+.|.++.++|.+|+.+.+
T Consensus 164 ~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~--~G~-~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 164 AND--YITSKVIDASENQDLAEQFQVVG-VPKIVI--NKG-VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp HCT--TEEEEEEEGGGCHHHHHHTTCCS-SSEEEE--GGG-TEEEESCCCHHHHHHHHHHHH
T ss_pred HCC--CeEEEEEECCCCHHHHHHcCCcc-cCEEEE--CCE-EEEeeCCCCHHHHHHHHHHHh
Confidence 983 49999999999999999999998 999998 787 443569999999999998765
No 16
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.79 E-value=3.6e-20 Score=222.75 Aligned_cols=195 Identities=15% Similarity=0.185 Sum_probs=139.7
Q ss_pred ccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeee---ecccCccccccCCcccccccc
Q psy12972 751 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVH---YDLFGTTDGFSGQDSASRNFH 826 (1578)
Q Consensus 751 ~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~---~~~~~~~~~i~g~~~~~~~~~ 826 (1578)
+..||...+. +..++|+|.||++||++|+++.|.|+++|+.+++. .++.++|. ...+|...++.+.+
T Consensus 123 ~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~------- 193 (361)
T 3uem_A 123 TEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEE------- 193 (361)
T ss_dssp STTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTT-------
T ss_pred CcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccC-------
Confidence 3345554431 23457899999999999999999999999999875 44555554 11256666665511
Q ss_pred ccccCccccccccc-----cc---cCc---------------------cCccc----ceeEEEeeccccccceecccCCC
Q psy12972 827 NHMYNPFDDVFSEG-----FN---FPF---------------------EEHDI----SLFHKLSTTHWNFEKNYIPKSYT 873 (1578)
Q Consensus 827 ~i~~~Ptiklf~~~-----~~---~~~---------------------~~~~i----~~~~vi~Lt~~nF~~~vl~~s~~ 873 (1578)
.|++.++..+ |. +.+ ....+ ....+..++.++|++.+... +
T Consensus 194 ----~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~--~ 267 (361)
T 3uem_A 194 ----CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDE--K 267 (361)
T ss_dssp ----CSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCT--T
T ss_pred ----CccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccC--C
Confidence 1333332210 00 000 00000 11124568899999887543 7
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEEcCC--ccccccCCCCC
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG--RTSFFKEPSFS 950 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G--~~~~y~~G~~s 950 (1578)
++++|.||||||++|+++.|.|+++|+.+++. ++.+++|||+.+. |++|+|.+ +||+++|.+| +....+.|.++
T Consensus 268 k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~-~Pt~~~~~~~~~~~~~~~~G~~~ 344 (361)
T 3uem_A 268 KNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHS-FPTLKFFPASADRTVIDYNGERT 344 (361)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCS-SSEEEEECSSSSCCCEECCSCSS
T ss_pred CcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcc-cCeEEEEECCCCcceeEecCCCC
Confidence 89999999999999999999999999999875 4999999999886 89999998 9999999655 44556679999
Q ss_pred HHHHHHHHHhhCC
Q psy12972 951 VQKMVEFFRLKLP 963 (1578)
Q Consensus 951 ~~~L~~fi~~~lp 963 (1578)
.++|.+|+.++..
T Consensus 345 ~~~l~~~l~~~~~ 357 (361)
T 3uem_A 345 LDGFKKFLESGGQ 357 (361)
T ss_dssp HHHHHHHHTTTSC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999987653
No 17
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.77 E-value=3.2e-19 Score=214.90 Aligned_cols=225 Identities=14% Similarity=0.050 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCcchh-hHHHHHhcCCCCCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhcCccccccccc
Q psy12972 283 LASVHQRSANRILSMCLTNGGLYI-KLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSF 361 (1578)
Q Consensus 283 ~~~~h~r~a~~l~~~~~~~Gg~yi-KlGQ~lstr~dllP~~~~~~L~~Lqd~~p~~~~~~~~~~~~~~~g~~~~~~~~~f 361 (1578)
.++.|.+.|++..+.+..+|+..+ +++|.+...++.. ++++.++++|||.+||.++.++.+.
T Consensus 14 ~~~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------------- 76 (365)
T 2y7j_A 14 KFNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQS-ANLLAEAKKLNDAQPKGTENLYFQS---------------- 76 (365)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchHHHHHHHHHHhcCccchhcccccccccccCCCchh-HHHHHHHHhhhhcCCCCcccccccc----------------
Confidence 356677889999999999999998 8899888877755 4566789999999998665543322
Q ss_pred CCCchhHHHHHHHHHhhhhhhhhhhHHHHHHHHhCCChhhhccccCC-----cccccccceEEEEEEec-CCCEEEEEEe
Q psy12972 362 DENPIAAASLAQALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFDE-----NPIAAASLAQVFRAVTK-EGVEVAVKVQ 435 (1578)
Q Consensus 362 ~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~~~lG~~~~~iF~~fd~-----~PlasaSiaQVhrA~l~-~G~~VAVKVq 435 (1578)
++.++|.+..+.|..|+. ++||+|++|+||+|+.+ +|+.||||++
T Consensus 77 -----------------------------~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~ 127 (365)
T 2y7j_A 77 -----------------------------MGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIM 127 (365)
T ss_dssp ----------------------------------CBCHHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred -----------------------------CCchhhcccchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEE
Confidence 234455555555555555 89999999999999986 7999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCc
Q psy12972 436 YIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSST 515 (1578)
Q Consensus 436 ~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~ 515 (1578)
+++.......|+ +++.+.+ .+|...+.++. +++.|..+..+++.++.
T Consensus 128 ~~~~~~~~~~~~-----------------------~~~~~~~------~~E~~~l~~l~----~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 128 EVTAERLSPEQL-----------------------EEVREAT------RRETHILRQVA----GHPHIITLIDSYESSSF 174 (365)
T ss_dssp ETTSSCCCHHHH-----------------------HHHHHHH------HHHHHHHHHHT----TCTTBCCEEEEEEBSSE
T ss_pred EccccccCHHHH-----------------------HHHHHHH------HHHHHHHHHhc----CCCCEeEEEEEEeeCCE
Confidence 987643322221 2223333 34444454442 45667667777777888
Q ss_pred eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 516 RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+||||+|||+. .++++|||....+
T Consensus 175 ~~lv~e~~~g~~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLT-EKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 899999999999988754 334677776666666655 7889999999999999999964 5899999976543
No 18
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.77 E-value=1.1e-18 Score=219.24 Aligned_cols=397 Identities=10% Similarity=0.084 Sum_probs=245.2
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
...++..||++.+ .++++|+|+||||||+||++++|+|+++|+.+++.++.++.++++. +|+..++.++
T Consensus 16 v~~l~~~~f~~~~---~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~----- 87 (504)
T 2b5e_A 16 VVKLATDSFNEYI---QSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGF----- 87 (504)
T ss_dssp CEECCTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSS-----
T ss_pred cEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcC-----
Confidence 3456778899876 3578999999999999999999999999999987544343333222 5666666555
Q ss_pred cccccccCcccccccccc---ccCccC----ccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF---NFPFEE----HDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACL 889 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~---~~~~~~----~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck 889 (1578)
||+.+|..|. ...+.+ +.+..+ .+..++. +++.+ ..+.....+|.|+.+.++
T Consensus 88 --------Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~--~~~~~-~~~~~~~~~v~~f~~~~~--- 153 (504)
T 2b5e_A 88 --------PSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVAD--LPAYL-ANETFVTPVIVQSGKIDA--- 153 (504)
T ss_dssp --------SEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCSEEECSC--HHHHH-HHSCCSSCEEEEEESCCH---
T ss_pred --------CEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCcceeHHH--HHHHH-hcCCCceEEEEEeCCCCc---
Confidence 8888887654 223333 222221 1234444 44433 221112566667776544
Q ss_pred cccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCC-C---CHHHHHHHHHhhCCCc
Q psy12972 890 QVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPS-F---SVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 890 ~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~-~---s~~~L~~fi~~~lp~~ 965 (1578)
...+.|.++|..+.+. +.|+.++ +++++++++ +++|+.......+.|. . +.+.|.+||....-|
T Consensus 154 ~~~~~f~~~A~~~~~~-~~F~~~~-----~~~~~~~~~-----i~l~~~~~~~~~~~g~~~~~~~~~~l~~fi~~~~~p- 221 (504)
T 2b5e_A 154 DFNATFYSMANKHFND-YDFVSAE-----NADDDFKLS-----IYLPSAMDEPVVYNGKKADIADADVFEKWLQVEALP- 221 (504)
T ss_dssp HHHHHHHHHHHHTTTT-CEEEEEE-----CTTSCCEEE-----EEETTEEEEEEECCSCHHHHTSHHHHHHHHHHHSSC-
T ss_pred hHHHHHHHHHHHhhcC-cEEEEEH-----HHHHhcCCe-----EEecCCCCcccccCCcccccCCHHHHHHHHHhcccC-
Confidence 3467999999999765 8999887 577777663 6777652233334576 5 889999999776543
Q ss_pred cccccccccHHHHhhcccCCCcEEEEEeccCCch----HHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcE
Q psy12972 966 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPV----RLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDS 1041 (1578)
Q Consensus 966 vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~----~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Pt 1041 (1578)
++..+|.+++..+.+. ..+++++|...... .......+.+++.++.|++++.. ....+++.|++....|+
T Consensus 222 ~v~~~t~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~i~F~~id~~--~~~~~~~~~gl~~~~P~ 295 (504)
T 2b5e_A 222 YFGEIDGSVFAQYVES----GLPLGYLFYNDEEELEEYKPLFTELAKKNRGLMNFVSIDAR--KFGRHAGNLNMKEQFPL 295 (504)
T ss_dssp SSCBCCHHHHHHHHHT----TSCEEEEEESSHHHHHHHHHHHHHHHHHTTTTCEEEEEEHH--HHTTHHHHTTCCSCSSE
T ss_pred CcccCCHhHHHHHhcC----CCcEEEEEecCcccHHHHHHHHHHHHHhcCCeeEEEEEehh--hhHHHHHHcCCcccCCE
Confidence 4778888999888866 34555544322211 11222334467888999999755 34468899999545789
Q ss_pred EEEeccCCCCCcccccc--CC-----------CCchhhhhhhhcC----CC-------------CCCcccCchhhhhhcC
Q psy12972 1042 LLIFKEDKDRPSASITM--NS-----------IPVPTLQDITDNN----PY-------------LTLPRISSQSMLDAVC 1091 (1578)
Q Consensus 1042 llvfk~~~~~~~~~l~~--~~-----------l~~~~L~~fI~~n----k~-------------p~vpeLts~~~~~~~c 1091 (1578)
+++++.... ..+... ++ ++...+..|+..- .. ..+..++..++.+.+-
T Consensus 296 v~i~~~~~~--~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~ 373 (504)
T 2b5e_A 296 FAIHDMTED--LKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVN 373 (504)
T ss_dssp EEEEETTTT--EEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHH
T ss_pred EEEEeCCcC--cccCCCCCccchhhccccccccCHHHHHHHHHHHHcCCCChhhhcCCCCccccccceecccccHHHhhc
Confidence 999965221 111111 22 4555666665432 11 1233455666555443
Q ss_pred CCCceEEEEE-ecCCcchHHHHHHHHHHHhhccCC--CCcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCC
Q psy12972 1092 PVKKLCVVLF-SEDSPEHDASRHTLRRFAQESRFV--HNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYK 1168 (1578)
Q Consensus 1092 ~~~~lcVll~-~~~~~~~~~~~~~lr~vA~~~~~~--~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~ 1168 (1578)
..++.++|.| .+-...+......+.++|++ +. ...+.|+.+|.+..... . + +. .++|.++.....
T Consensus 374 ~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~--~~~~~~~v~~~~vd~~~~~~~-~-~-------~v-~~~Pt~~~~~~G 441 (504)
T 2b5e_A 374 DPKKDVLVLYYAPWCGHCKRLAPTYQELADT--YANATSDVLIAKLDHTENDVR-G-V-------VI-EGYPTIVLYPGG 441 (504)
T ss_dssp CTTCCEEEEEECTTCHHHHHHHHHHHHHHHH--HHHHCSSCEEEEEEGGGCCCS-S-C-------CC-SSSSEEEEECCT
T ss_pred cCCCCEEEEEECCCChhHHHHhHHHHHHHHH--hhccCCcEEEEEecCCccccc-c-C-------Cc-eecCeEEEEeCC
Confidence 2344555555 45556777888899999988 65 23588999998654321 2 3 22 467877766433
Q ss_pred cc-eEeeccCCcccccccccccHHHHHHHhhhhhcCCcc
Q psy12972 1169 KI-KYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1169 ~~-kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~ 1206 (1578)
+. .-..+.|. .+.+.|..+|++.+.....
T Consensus 442 ~~~~~~~~~G~---------~~~~~l~~~i~~~~~~~~~ 471 (504)
T 2b5e_A 442 KKSESVVYQGS---------RSLDSLFDFIKENGHFDVD 471 (504)
T ss_dssp TSCCCCBCCSC---------CCHHHHHHHHHHHCTTCCC
T ss_pred ceecceEecCC---------CCHHHHHHHHHhcCCCCCC
Confidence 22 11113332 4678899999987654443
No 19
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.77 E-value=2.5e-18 Score=194.09 Aligned_cols=205 Identities=20% Similarity=0.289 Sum_probs=158.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCc--eEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~--v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.|||+||++|+.+.|.|+++++.+++.+ +.++.|||+.++++|++|+|++ +||
T Consensus 17 v~~l~~~~~~~~~---~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-~Pt 92 (241)
T 3idv_A 17 VLVLNDANFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSG-YPT 92 (241)
T ss_dssp EEEECTTTHHHHH---TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred cEEecccCHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCc-CCE
Confidence 5679999999877 457899999999999999999999999999997654 9999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCC------ccccccccccHHHHhhcccCCCcEEEEEec-------cCCch
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY------KLIVPLSATNVDAFLDNWREDNKVHALLFQ-------RSLPV 999 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~------~vv~~it~~~~~~fl~~~~~~~~~~VlfF~-------~~~~~ 999 (1578)
+++|++|+.+. +.|.++.++|.+|+.+.+.+ ..+..++.+++++++... .++++.|. ....+
T Consensus 93 ~~~~~~g~~~~-~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~f~a~wC~~C~~~~p 167 (241)
T 3idv_A 93 IKILKKGQAVD-YEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDA----DIILVEFYAPWCGHCKKLAP 167 (241)
T ss_dssp EEEEETTEEEE-CCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHC----SEEEEEEECTTCTGGGGTHH
T ss_pred EEEEcCCCccc-ccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccC----CeEEEEEECCCCHHHHHhHH
Confidence 99999998775 55999999999999877533 245667889999998763 45555552 23334
Q ss_pred HHHHHHHHhhc-CCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcCCC
Q psy12972 1000 RLRYLINAFKH-RTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNNPY 1075 (1578)
Q Consensus 1000 ~~~~~~~a~~~-~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~nk~ 1075 (1578)
.+......... ...+.|+.++++ .+.+++++|+|.+ .||+++|+++. +.. ..+..+...|.+|+....-
T Consensus 168 ~~~~~a~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~g~--~~~--~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 168 EYEKAAKELSKRSPPIPLAKVDAT--AETDLAKRFDVSG-YPTLKIFRKGR--PYD--YNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHHHHHHTSSSCCCEEEEETT--TCHHHHHHTTCCS-SSEEEEEETTE--EEE--CCSCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCcEEEEEEECC--CCHHHHHHcCCcc-cCEEEEEECCe--EEE--ecCCCCHHHHHHHHHhhhC
Confidence 44433333322 234788887544 6789999999987 57999997542 222 2456677788888877643
No 20
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=211.24 Aligned_cols=289 Identities=13% Similarity=0.127 Sum_probs=172.5
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-----Ccceeeeeecc---cCccccccCC
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-----GVGFFTVHYDL---FGTTDGFSGQ 818 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-----~vg~v~~~~~~---~~~~~~i~g~ 818 (1578)
...++..||+..+ .++++|||+||||||+||++++|+|+++|+.+++. .+.++.++++. +|+..++.+
T Consensus 7 v~~l~~~~f~~~~---~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~- 82 (382)
T 2r2j_A 7 ITSLDTENIDEIL---NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISK- 82 (382)
T ss_dssp -CBCCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCE-
T ss_pred eEECCHHHHHHHH---hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCc-
Confidence 3456777888865 35689999999999999999999999999999642 23333332221 444444444
Q ss_pred ccccccccccccCcccccccccccc--CccC----ccccee-------EEEeec-cccccceecccCCCCcEEEEEEcCC
Q psy12972 819 DSASRNFHNHMYNPFDDVFSEGFNF--PFEE----HDISLF-------HKLSTT-HWNFEKNYIPKSYTTPHLILFYSDW 884 (1578)
Q Consensus 819 ~~~~~~~~~i~~~Ptiklf~~~~~~--~~~~----~~i~~~-------~vi~Lt-~~nF~~~vl~~s~~~~~LV~Fyapw 884 (1578)
+||+.+|..|... .+.+ +.+..+ .+..++ .++++. + ..+++++|.||+++
T Consensus 83 ------------~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l---~~~~~~~v~ff~~~ 146 (382)
T 2r2j_A 83 ------------YPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-L---DRSKRNIIGYFEQK 146 (382)
T ss_dssp ------------ESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC----------------CCEEEEEESCS
T ss_pred ------------CCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-h---cCCCCEEEEEECCC
Confidence 4888888765432 2333 222221 113443 345665 4 34678999999998
Q ss_pred CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc--cccccCCCC-CHHHHHHHHHhh
Q psy12972 885 CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR--TSFFKEPSF-SVQKMVEFFRLK 961 (1578)
Q Consensus 885 Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~--~~~y~~G~~-s~~~L~~fi~~~ 961 (1578)
|..+ .+.|.++|..+++. +.|+.+.+ +++++++|++ +| +++++.+. ....|.|.+ +.++|.+||...
T Consensus 147 ~~~~---~~~f~~~A~~~~~~-~~F~~~~~----~~~~~~~v~~-~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~ 216 (382)
T 2r2j_A 147 DSDN---YRVFERVANILHDD-CAFLSAFG----DVSKPERYSG-DN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDK 216 (382)
T ss_dssp SSHH---HHHHHHHHHHHTTT-CEEEEEES----CC---------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHH
T ss_pred CChh---HHHHHHHHHHhhcc-ceEEEEeh----hhHHhhCCCC-Cc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhc
Confidence 7654 56899999999876 88888776 4688899997 99 66665422 223345777 899999999876
Q ss_pred CCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHH----HH-HhhcCCCeEEEEEEcccCCChhHHhhcCCC
Q psy12972 962 LPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYL----IN-AFKHRTTIVFGVIVYDQEDSSSVFQRFKVP 1036 (1578)
Q Consensus 962 lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~----~~-a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~ 1036 (1578)
..| .+..+|.+++..++.+. ...+++|+..........+ .. +..++.++.|++++.+ ....+++.+++.
T Consensus 217 ~~p-~v~elt~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~ 290 (382)
T 2r2j_A 217 CVP-LVREITFENGEELTEEG---LPFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKT 290 (382)
T ss_dssp HSC-SSEECCHHHHHHHHTTC---CCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCC
T ss_pred ccC-ceEecChhhHHHHhcCC---CcEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCC
Confidence 543 47788888888887652 3344444443332222222 22 2356778999999644 567788999997
Q ss_pred C-CCcEEEEeccCCCCCccccc-cCCCCchhhhhhhhcC
Q psy12972 1037 G-DKDSLLIFKEDKDRPSASIT-MNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1037 ~-~~Ptllvfk~~~~~~~~~l~-~~~l~~~~L~~fI~~n 1073 (1578)
. ..|++++++.... ..+.. .+.++...|.+|++.-
T Consensus 291 ~~~~P~i~i~~~~~~--y~~~~~~~~~~~~~i~~F~~d~ 327 (382)
T 2r2j_A 291 PADCPVIAIDSFRHM--YVFGDFKDVLIPGKLKQFVFDL 327 (382)
T ss_dssp GGGCSEEEEECSSCE--EECCCSGGGGSTTHHHHHHHHH
T ss_pred ccCCCEEEEEcchhc--CCCCccccccCHHHHHHHHHHH
Confidence 3 4689888743211 11111 1222335677776644
No 21
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.74 E-value=2.3e-17 Score=187.55 Aligned_cols=184 Identities=13% Similarity=0.242 Sum_probs=146.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEEC--ccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHV--HNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc--~~~~~L~~k~gV~~~~ 930 (1578)
+..++.++|++.+... +++++|.|||+||++|+++.|.|+++++.+++ .++.++.||| +.+.++|++|+|.+ +
T Consensus 14 v~~l~~~~f~~~i~~~--~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~-~ 90 (244)
T 3q6o_A 14 LTLLQADTVRGAVLGS--RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG-F 90 (244)
T ss_dssp SEEECTTTHHHHHSSC--SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS-S
T ss_pred ceeCChhhHHHHHhhC--CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc-c
Confidence 4578999999988544 68999999999999999999999999999986 2499999999 66899999999998 9
Q ss_pred CcEEEEcCCccc-----cccCCCCCHHHHHHHHHhhCCCcc---------ccccccccHHHHhhcccCCCcEEEEEeccC
Q psy12972 931 PQIALLTDGRTS-----FFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLFQRS 996 (1578)
Q Consensus 931 PTl~lf~~G~~~-----~y~~G~~s~~~L~~fi~~~lp~~v---------v~~it~~~~~~fl~~~~~~~~~~VlfF~~~ 996 (1578)
||+++|.+|+.. .++.| ++.+.|.+++.+.++... ...++.++++.|+... +..+++++|.+.
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~--~~~~~al~f~~~ 167 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARN--NEEYLALIFEXG 167 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHC--CCSEEEEEEECT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcC--CCceEEEEEEEC
Confidence 999999875432 24545 799999999987764322 2445667888888763 467888888887
Q ss_pred CchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccC
Q psy12972 997 LPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKED 1048 (1578)
Q Consensus 997 ~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~ 1048 (1578)
.................+.++.+. ..+..++++|+|++ .|++++|+.+
T Consensus 168 ~~~~~~~~~~d~~~~~~i~v~~~~---~~~~~l~~~f~v~~-~Pslvl~~~~ 215 (244)
T 3q6o_A 168 GSYLAREVALDLSQHKGVAVRRVL---NTEANVVRKFGVTD-FPSCYLLFRN 215 (244)
T ss_dssp TCCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCC-SSEEEEEETT
T ss_pred CcchHHHHHHHhccCCceEEEEEe---CchHHHHHHcCCCC-CCeEEEEeCC
Confidence 777777777776666778888773 23589999999997 5799988654
No 22
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.69 E-value=9.6e-18 Score=190.78 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=125.4
Q ss_pred cCccceecccccc--ccccccchHHHHHHHHHhc---CCC-cceeeeeecc---cCccccccCCccccccccccccCccc
Q psy12972 764 YTTPHLILFYSDW--CFACLQVEPIFKKLMDELS---PLG-VGFFTVHYDL---FGTTDGFSGQDSASRNFHNHMYNPFD 834 (1578)
Q Consensus 764 ~~~~~lV~FYApw--CghCk~LaP~weklA~~Lk---~~~-vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~~~Pti 834 (1578)
-+++++|.||++| |++|+.+.|.++++|+... +.. +.++.++.+. .|...++.+. ||+
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~-------------Pt~ 90 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERV-------------PTV 90 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSS-------------SEE
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcC-------------CEE
Confidence 4578999999999 9999999999999998842 211 4343333222 4445555444 887
Q ss_pred cccccccccCccC----cccceeE---------EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHH
Q psy12972 835 DVFSEGFNFPFEE----HDISLFH---------KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDE 901 (1578)
Q Consensus 835 klf~~~~~~~~~~----~~i~~~~---------vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~ 901 (1578)
.+|+ + ...|.+ .....+. ...+++++++. +. .-.++++++.||||||++|+.+.|.|++++..
T Consensus 91 ~i~~-g-~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~-~~-~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~ 166 (243)
T 2hls_A 91 AFLG-G-EVRWTGIPAGEEIRALVEVIMRLSEDESGLEDATKEA-LK-SLKGRVHIETIITPSCPYCPYAVLLAHMFAYE 166 (243)
T ss_dssp EETT-T-TEEEESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHH-HH-HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHH
T ss_pred EEEC-C-ceeEcCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHH-HH-HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHH
Confidence 7773 2 222222 1111110 01233333322 11 11245778999999999999999999999999
Q ss_pred hC--C-CceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 902 LS--P-LGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 902 l~--~-~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+. + .+|.++.||++.+++++++|+|.+ +||+++ +|+.. +.|.++.++|.+|+.+.++.
T Consensus 167 ~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~-vPt~~i--~G~~~--~~G~~~~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 167 AWKQGNPVILSEAVEAYENPDIADKYGVMS-VPSIAI--NGYLV--FVGVPYEEDFLDYVKSAAEG 227 (243)
T ss_dssp HHHTTCCCEEEEEEETTTCHHHHHHTTCCS-SSEEEE--TTEEE--EESCCCHHHHHHHHHHHHTT
T ss_pred cccccCCcEEEEEEECccCHHHHHHcCCee-eCeEEE--CCEEE--EeCCCCHHHHHHHHHHHhhc
Confidence 82 1 349999999999999999999998 999988 78754 45999999999999988754
No 23
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.67 E-value=2.3e-16 Score=197.54 Aligned_cols=186 Identities=13% Similarity=0.256 Sum_probs=150.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC--CceEEEEEECc--cchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVH--NEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~--~~~~L~~k~gV~~~~ 930 (1578)
+.+++.++|++.+... +++++|.|||+||++|+++.|.|+++++.+++ .++.|++|||+ ++.++|++|+|.+ +
T Consensus 14 V~~Lt~~~f~~~v~~~--~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~-~ 90 (519)
T 3t58_A 14 LTLLDADSVRPTVLGS--SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG-F 90 (519)
T ss_dssp SEEECTTTHHHHHSSC--SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS-B
T ss_pred cEECChHHHHHHHHhC--CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc-c
Confidence 4578999999977543 68999999999999999999999999999986 24999999995 4889999999998 9
Q ss_pred CcEEEEcC----CccccccCCCCCHHHHHHHHHhhCCCcc---------ccccccccHHHHhhcccCCCcEEEEEeccCC
Q psy12972 931 PQIALLTD----GRTSFFKEPSFSVQKMVEFFRLKLPYKL---------IVPLSATNVDAFLDNWREDNKVHALLFQRSL 997 (1578)
Q Consensus 931 PTl~lf~~----G~~~~y~~G~~s~~~L~~fi~~~lp~~v---------v~~it~~~~~~fl~~~~~~~~~~VlfF~~~~ 997 (1578)
||+++|.+ |+....+.|.++.+.|.+++.+.++... +..++.+++++++... +..+++++|.+..
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~~~--~~~~vallF~~~~ 168 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFTRN--KADYLALVFERED 168 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGGSC--CCSEEEEEEECTT
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhccC--CCCeEEEEecCCc
Confidence 99999984 4444445577999999999988764322 3445667788888763 4678889998888
Q ss_pred chHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEeccCC
Q psy12972 998 PVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDK 1049 (1578)
Q Consensus 998 ~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~ 1049 (1578)
+...............+.++++. ..+..++++|+|+.. |++++|+.+.
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~---~~~~~l~~kfgV~~~-Pslvl~~~nG 216 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVL---NTESDLVNKFGVTDF-PSCYLLLRNG 216 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCS-SEEEEEETTS
T ss_pred hHHHHHHHHHhhccCCeeEEEec---CchHHHHHHcCCCCC-CeEEEEeCCC
Confidence 77777777777777778888873 346789999999975 7999996653
No 24
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.65 E-value=6e-16 Score=185.91 Aligned_cols=279 Identities=14% Similarity=0.137 Sum_probs=185.8
Q ss_pred cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccccCcccccccc---c
Q psy12972 764 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHMYNPFDDVFSE---G 840 (1578)
Q Consensus 764 ~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~~~Ptiklf~~---~ 840 (1578)
.+++++|-||.+-++.+ ...|.++|+.+.+. .+.......+|...++.+ |++.+|+. +
T Consensus 34 ~~~~~vvgff~~~~~~~---~~~f~~~A~~~~~~--~F~~t~~~~v~~~~~v~~--------------~~i~lfk~f~~~ 94 (361)
T 3uem_A 34 SSEVAVIGFFKDVESDS---AKQFLQAAEAIDDI--PFGITSNSDVFSKYQLDK--------------DGVVLFKKFDEG 94 (361)
T ss_dssp TSSEEEEEECSCTTSHH---HHHHHHHHHHCSSS--CEEEECCHHHHHHTTCSS--------------SEEEEEESSTTS
T ss_pred cCCcEEEEEEcCCCchH---HHHHHHHHhcCCCc--eEEEECcHHHHHHhCCCC--------------CeEEEEEecCCC
Confidence 46778999998766654 57999999999543 333232233444444332 34444432 1
Q ss_pred ---cccCccCccccee-------EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEE
Q psy12972 841 ---FNFPFEEHDISLF-------HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFF 910 (1578)
Q Consensus 841 ---~~~~~~~~~i~~~-------~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a 910 (1578)
|.+.++.+.+..| .+.++|.++|...+.. ..++++|.||++||++|+++.|.|+++|+.+++. +.|+
T Consensus 95 ~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~--~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~ 171 (361)
T 3uem_A 95 RNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGG--EIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFI 171 (361)
T ss_dssp EEECCSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSC--SCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEE
T ss_pred ccccCCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcC--CCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEE
Confidence 2222222233332 2468899999876632 2567899999999999999999999999999987 9999
Q ss_pred EEECc--cchhhHhHcCccc-cCCcEEEEcCCccc-ccc--CCCCCHHHHHHHHHhhCCC-----------------ccc
Q psy12972 911 TVHVH--NEQGLARRLGVGS-QLPQIALLTDGRTS-FFK--EPSFSVQKMVEFFRLKLPY-----------------KLI 967 (1578)
Q Consensus 911 ~VDc~--~~~~L~~k~gV~~-~~PTl~lf~~G~~~-~y~--~G~~s~~~L~~fi~~~lp~-----------------~vv 967 (1578)
.|||+ .++.+|+.|||++ ++|+++++..|... .|. .|.++.++|.+|+.+.+.. ..+
T Consensus 172 ~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v 251 (361)
T 3uem_A 172 FIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPV 251 (361)
T ss_dssp EECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSS
T ss_pred EecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCc
Confidence 99999 6899999999973 39999999875432 232 4789999999999876421 124
Q ss_pred cccccccHHHHhhcccCCCcEEEEEecc-------CCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCc
Q psy12972 968 VPLSATNVDAFLDNWREDNKVHALLFQR-------SLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKD 1040 (1578)
Q Consensus 968 ~~it~~~~~~fl~~~~~~~~~~VlfF~~-------~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~P 1040 (1578)
..++.+++++++... ++++++.|.. ...+.+..+.........+.|+.++.+... +++|+|.+ .|
T Consensus 252 ~~l~~~~f~~~~~~~---~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~----~~~~~v~~-~P 323 (361)
T 3uem_A 252 KVLVGKNFEDVAFDE---KKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE----VEAVKVHS-FP 323 (361)
T ss_dssp EEECTTTHHHHHTCT---TCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB----CSSCCCCS-SS
T ss_pred EEeecCchhhhcccC---CCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc----hhhcCCcc-cC
Confidence 455778888887543 5556555522 223334443333333345888888654332 67899987 57
Q ss_pred EEEEeccCCC-CCccccccCCCCchhhhhhhhcCC
Q psy12972 1041 SLLIFKEDKD-RPSASITMNSIPVPTLQDITDNNP 1074 (1578)
Q Consensus 1041 tllvfk~~~~-~~~~~l~~~~l~~~~L~~fI~~nk 1074 (1578)
|+++|+.+.. .+..+ .+..+...|.+||+.+.
T Consensus 324 t~~~~~~~~~~~~~~~--~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 324 TLKFFPASADRTVIDY--NGERTLDGFKKFLESGG 356 (361)
T ss_dssp EEEEECSSSSCCCEEC--CSCSSHHHHHHHHTTTS
T ss_pred eEEEEECCCCcceeEe--cCCCCHHHHHHHHHhcC
Confidence 9999965422 33322 45667788999998873
No 25
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.59 E-value=8.5e-16 Score=151.74 Aligned_cols=98 Identities=20% Similarity=0.389 Sum_probs=87.0
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.+ +.+++++|.|||+||++|+.+.|.|+++++.+.+ +.+++||+++++++|++|+|++ +||+++|++
T Consensus 7 ~~~~f~~~l~~-~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~~~~l~~~~~V~~-~PT~~~~~~ 82 (105)
T 3zzx_A 7 DQEDFTKQLNE-AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDECEDIAQDNQIAC-MPTFLFMKN 82 (105)
T ss_dssp SHHHHHHHHHH-TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEecccCHHHHHHcCCCe-ecEEEEEEC
Confidence 45688887643 3478999999999999999999999999998864 8999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhh
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+.+....| .+.++|.+||.++
T Consensus 83 G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 83 GQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEEeC-cCHHHHHHHHHhc
Confidence 998888878 6889999999764
No 26
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.59 E-value=6e-16 Score=152.17 Aligned_cols=71 Identities=46% Similarity=0.821 Sum_probs=66.4
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDG 706 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~ 706 (1578)
..|+|+||||++++|.++||+|||+++++||||+++ .+.++++|++|++||++|+||.+|+.||.++....
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 369999999999999999999999999999999997 47889999999999999999999999999998753
No 27
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.58 E-value=2.3e-15 Score=153.13 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=90.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC----CCceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~----~~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
++.++.++|++.+.+ .+++++|.|||+||++|+.+.|.|+++|+.+. ..++.+++|||++++++|++|+|.+ +
T Consensus 17 v~~l~~~~f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~-~ 93 (127)
T 3h79_A 17 VVELTDETFDSIVMD--PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG-F 93 (127)
T ss_dssp CEECCTTTHHHHHTC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS-S
T ss_pred eEECChhhHHHHHhC--CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc-C
Confidence 457899999998753 37899999999999999999999999998763 1239999999999999999999998 9
Q ss_pred CcEEEEcCCccc--cccCCCCCHHHHHHHHHhh
Q psy12972 931 PQIALLTDGRTS--FFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 931 PTl~lf~~G~~~--~y~~G~~s~~~L~~fi~~~ 961 (1578)
||+++|++|... ..+.|.++.++|.+|+.+.
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999988653 3566999999999999764
No 28
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.8e-15 Score=141.06 Aligned_cols=73 Identities=48% Similarity=0.797 Sum_probs=68.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||++++++|||+++.+.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 3 SGSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp CSCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3456799999999999999999999999999999999998899999999999999999999999999988764
No 29
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.57 E-value=2.4e-15 Score=139.89 Aligned_cols=69 Identities=45% Similarity=0.848 Sum_probs=66.2
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|+|++|||++++|.++||+|||++++++|||+++++.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 589999999999999999999999999999999998899999999999999999999999999998764
No 30
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.56 E-value=6.8e-14 Score=159.72 Aligned_cols=225 Identities=16% Similarity=0.080 Sum_probs=165.4
Q ss_pred CCCccccccccccHHHHhhc-ccCCCcEEEEEeccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCC
Q psy12972 962 LPYKLIVPLSATNVDAFLDN-WREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039 (1578)
Q Consensus 962 lp~~vv~~it~~~~~~fl~~-~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~ 1039 (1578)
.+|++..+.+.+++++|++. . +.++|+||.+..++....+..++ .+++.+.|+.+ .+++++++++++.
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~---~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t-----~~~~v~~~~~v~~-- 73 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGD---DVVILGVFQGVGDPGYLQYQDAANTLREDYKFHHT-----FSTEIAKFLKVSL-- 73 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCS---SCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEE-----CCHHHHHHHTCCS--
T ss_pred CCCCceecCCHHHHHHHHhcCC---CeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEE-----CcHHHHHHcCCCC--
Confidence 45555666677889999987 6 88999999888888887777766 56799999999 7889999999975
Q ss_pred cEEEEeccC------CCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecC-----Ccch
Q psy12972 1040 DSLLIFKED------KDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSED-----SPEH 1108 (1578)
Q Consensus 1040 Ptllvfk~~------~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~-----~~~~ 1108 (1578)
|+|++|+.+ .+....+-..+.++...|.+||..+.+|+++++|.++.....- .+.+|++++..+ .++.
T Consensus 74 p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~ 152 (250)
T 3ec3_A 74 GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTAT 152 (250)
T ss_dssp SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHH
T ss_pred CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc-cCccEEEEEecccccccchhH
Confidence 899999742 1222332111356778899999999999999999998876552 456787777533 2234
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecCcchHHHHhccCCCCCCccccce-eEEEEEcCCcceEeeccCCccccccccc
Q psy12972 1109 DASRHTLRRFAQESRFVHNNIAFMYVFIEKQPEFVNALTSPEDSSEISLHI-AAMWRMDYKKIKYGWLLGDAVDDWKDYN 1187 (1578)
Q Consensus 1109 ~~~~~~lr~vA~~~~~~~~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~l-p~l~~~n~~~~kY~~l~~~~~~~~~~~~ 1187 (1578)
+.+++.++++|++ |+ + +.|+|+|++.+...++.|..+. .+. |.+++.|..+.+|.+..+ .
T Consensus 153 ~~~~~~~~~vAk~--~k-k-i~F~~~d~~~~~~~l~~fgl~~------~~~~p~~~~~~~~~~ky~~~~~---------~ 213 (250)
T 3ec3_A 153 QFWRNKVLEVAKD--FP-E-YTFAIADEEDYATEVKDLGLSE------SGGDVNAAILDESGKKFAMEPE---------E 213 (250)
T ss_dssp HHHHHHHHHHHTT--CT-T-SEEEEEETTTTHHHHHHTTCSS------CSCSCEEEEECTTSCEEECCCC---------S
T ss_pred HHHHHHHHHHHHh--hc-c-eeEEEEcHHHHHHHHHHcCCCc------cCCCcEEEEEcCCCceecCCcc---------c
Confidence 6688999999999 88 4 9999999998888888883332 122 466677766789975432 3
Q ss_pred ccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1188 TTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1188 ~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
+|.+.|..|++.+++|... |.+.+|..|.
T Consensus 214 ~t~~~i~~Fv~~~~~Gkl~--------p~~kSepiPe 242 (250)
T 3ec3_A 214 FDSDALREFVMAFKKGKLK--------PVIKSQPVPK 242 (250)
T ss_dssp CCHHHHHHHHHHHHTTCCC--------CCC-------
T ss_pred CCHHHHHHHHHHHHCCCcc--------ceeecCCCCC
Confidence 6899999999999999988 6666665554
No 31
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.7e-15 Score=144.60 Aligned_cols=73 Identities=45% Similarity=0.818 Sum_probs=68.3
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||+++++||||+++.+.+.++|++|++||++|+||.+|+.||.++...
T Consensus 3 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 3 SGSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp SCCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3456799999999999999999999999999999999998899999999999999999999999999988753
No 32
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.54 E-value=8.1e-14 Score=159.22 Aligned_cols=217 Identities=12% Similarity=0.163 Sum_probs=162.1
Q ss_pred hCCCccccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHh-hcCCCeEEEEEEcccCCChhHHhhcCCCCCC
Q psy12972 961 KLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAF-KHRTTIVFGVIVYDQEDSSSVFQRFKVPGDK 1039 (1578)
Q Consensus 961 ~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~-~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~ 1039 (1578)
+++|++..+.+.++++.|++.. +.++|+||.+..++....+..++ .+++++.|+.+ .+.+++++|+++.
T Consensus 3 ~~gP~v~~l~s~~~~~~~l~~~---~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~-----~~~~v~~~~~~~~-- 72 (252)
T 2h8l_A 3 LGSPASVPLRTEEEFKKFISDK---DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHT-----NVESLVNEYDDNG-- 72 (252)
T ss_dssp ---CCEEECCSHHHHHHHHTSS---SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEE-----CCHHHHHHHCSSS--
T ss_pred cCCCCceeecCHHHHHHHhhcC---CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEE-----ChHHHHHHhCCCC--
Confidence 4556666655778899999875 77899999887777766666655 56799999999 6788999999974
Q ss_pred cEEEEeccC------CCCCccccccCCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEecCCc----chH
Q psy12972 1040 DSLLIFKED------KDRPSASITMNSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSEDSP----EHD 1109 (1578)
Q Consensus 1040 Ptllvfk~~------~~~~~~~l~~~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~~~~----~~~ 1109 (1578)
|++++|+.+ .+.+..+ ..++++...|.+||..+.+|+++++|..+.... . ...+|++++..+.. ..+
T Consensus 73 p~i~~fk~~~~~~kf~e~~~~y-~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~-~~~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 73 EGIILFRPSHLTNKFEDKTVAY-TEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI-Q-GKDLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp EEEEEECCGGGCCTTSCSEEEC-CCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-S-SSSEEEEEECCBTTTBHHHHH
T ss_pred CcEEEEcchhhccccccccccc-CCCCcCHHHHHHHHHhcccCCeeecccccHhhh-c-CCCeEEEEeecchhhcchhHH
Confidence 899999742 1222222 145567789999999999999999999998775 2 45788877753322 234
Q ss_pred HHHHHHHHHHhhccCCC--CcEEEEEEecCcchHHHHhccCCCCCCccccceeEEEEEcCCcceEeeccCCccccccccc
Q psy12972 1110 ASRHTLRRFAQESRFVH--NNIAFMYVFIEKQPEFVNALTSPEDSSEISLHIAAMWRMDYKKIKYGWLLGDAVDDWKDYN 1187 (1578)
Q Consensus 1110 ~~~~~lr~vA~~~~~~~--~~v~F~~vd~~~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~~kY~~l~~~~~~~~~~~~ 1187 (1578)
.+++.++++|++ |++ ..+.|+|+|++.++.+++.|.... + ..++|++.+.|..+.+|. +++ .
T Consensus 150 ~~~~~~~~vA~~--~~~k~~~~~F~~~d~~~~~~~~~~fgl~~---~-~~~~P~v~i~~~~~~ky~-~~~---------~ 213 (252)
T 2h8l_A 150 YWRNRVMMVAKK--FLDAGHKLNFAVASRKTFSHELSDFGLES---T-AGEIPVVAIRTAKGEKFV-MQE---------E 213 (252)
T ss_dssp HHHHHHHHHHHH--HHHTTCCCEEEEEETTTTHHHHGGGTCCC---C-SCSSCEEEEECTTSCEEE-CCS---------C
T ss_pred HHHHHHHHHHHH--ccccCceEEEEEEchHHHHHHHHHcCCCC---c-cCCCCEEEEEeCcCcEec-CCc---------c
Confidence 678899999999 764 359999999999999888884310 0 136888888887667886 343 2
Q ss_pred ccHHH--HHHHhhhhhcCCcc
Q psy12972 1188 TTKDR--LDAGLRSLVNDPYN 1206 (1578)
Q Consensus 1188 ~t~e~--l~~fL~~ll~g~~~ 1206 (1578)
+|.+. |..|++.++.|...
T Consensus 214 ~t~~~~~i~~F~~~~~~Gkl~ 234 (252)
T 2h8l_A 214 FSRDGKALERFLQDYFDGNLK 234 (252)
T ss_dssp CCTTSHHHHHHHHHHHHTCSC
T ss_pred cCcchHHHHHHHHHHHCCCcc
Confidence 55567 99999999999987
No 33
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.54 E-value=3.7e-14 Score=159.09 Aligned_cols=186 Identities=11% Similarity=0.064 Sum_probs=130.7
Q ss_pred CCcEEEEEE-----cCCCcccccccHHHHHHHHHh--CCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 873 TTPHLILFY-----SDWCFACLQVEPIFKKLMDEL--SPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 873 ~~~~LV~Fy-----apwCg~Ck~l~p~~~~lA~~l--~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
.++++|.|| +|||+||+.+.|.|+++|+.+ .+. +.+++|||++++++|++|+|++ +||+++|++|.....+
T Consensus 20 ~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 20 KEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDK-IKLDIYSPFTHKEETEKYGVDR-VPTIVIEGDKDYGIRY 97 (229)
T ss_dssp CSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTT-EEEEEECTTTCHHHHHHTTCCB-SSEEEEESSSCCCEEE
T ss_pred cCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCc-eEEEEecCcccHHHHHHcCCCc-CcEEEEECCCccccee
Confidence 567777777 899999999999999999888 444 9999999999999999999998 9999999877666666
Q ss_pred CCCCCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcEEEE-EeccCCc---hHHHHHHHHhhcCCCeEEEEEE
Q psy12972 946 EPSFSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKVHAL-LFQRSLP---VRLRYLINAFKHRTTIVFGVIV 1020 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~~Vl-fF~~~~~---~~~~~~~~a~~~~~~v~Fg~v~ 1020 (1578)
.|.++.+++.+|+.+.+.. ..+..+++++++.+.... ..+.++ |+..... .....+...+...+.+.|+.++
T Consensus 98 ~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~~vd 174 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVD---IPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSKVID 174 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCC---SCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred cCCccHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcC---CCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEEEEE
Confidence 6999999999999876421 114556778888877542 444344 4432221 1122222222222578888885
Q ss_pred cccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1021 YDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1021 ~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
++ .+.+++++|+|.+ .|++++ ++. ... ..+..+...+.+|++.
T Consensus 175 ~~--~~~~l~~~~~v~~-~Pt~~~--~G~--~~~--~~G~~~~~~l~~~l~~ 217 (229)
T 2ywm_A 175 AS--ENQDLAEQFQVVG-VPKIVI--NKG--VAE--FVGAQPENAFLGYIMA 217 (229)
T ss_dssp GG--GCHHHHHHTTCCS-SSEEEE--GGG--TEE--EESCCCHHHHHHHHHH
T ss_pred CC--CCHHHHHHcCCcc-cCEEEE--CCE--EEE--eeCCCCHHHHHHHHHH
Confidence 54 6788999999987 578887 221 211 2344555667777654
No 34
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=4.2e-15 Score=138.94 Aligned_cols=73 Identities=53% Similarity=0.860 Sum_probs=67.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||++||+++++||||+++ .+.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 3 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 3 SGSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SSCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 345679999999999999999999999999999999997 5788999999999999999999999999988764
No 35
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.53 E-value=5.2e-15 Score=151.69 Aligned_cols=103 Identities=15% Similarity=0.135 Sum_probs=94.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCC--cccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWC--FACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwC--g~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
..+|+++|++.+... +++++|.|||+|| ++|+.+.|.++++++++.+. +.|++||.+++++++.+|||.+ .||+
T Consensus 18 ~~vt~~~F~~~v~~~--~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe~~~la~~ygV~s-iPTl 93 (137)
T 2qsi_A 18 TLVDEATVDDFIAHS--GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEAERGLMARFGVAV-CPSL 93 (137)
T ss_dssp EEECTTTHHHHHHTS--SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGGHHHHHHHHTCCS-SSEE
T ss_pred cccCHhHHHHHHhcC--CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCcc-CCEE
Confidence 378999999988432 4599999999999 99999999999999999876 9999999999999999999997 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+.+....|..+.+.|.+++.+.+
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999999988889999999999998765
No 36
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=4.8e-15 Score=141.46 Aligned_cols=72 Identities=53% Similarity=1.016 Sum_probs=67.9
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
....|+|++|||+++++.++||+|||+++++||||+++++.+.++|++|++||++|+||.+|..||.+|...
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 446799999999999999999999999999999999998899999999999999999999999999988654
No 37
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.52 E-value=2.6e-14 Score=159.87 Aligned_cols=187 Identities=13% Similarity=0.136 Sum_probs=130.5
Q ss_pred CCCcEEEEEEcC-CCcccccccHHHHHHHHHhCCCceEEEEEECcc--chhhHhHcCccccCCcEEEEcCCccc-cccCC
Q psy12972 872 YTTPHLILFYSD-WCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN--EQGLARRLGVGSQLPQIALLTDGRTS-FFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~Fyap-wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~--~~~L~~k~gV~~~~PTl~lf~~G~~~-~y~~G 947 (1578)
.+..++|.||++ ||++|+.+.|.|+++|+. .+. +.+++|||+. ++++|++|||.+ +||+++|++|+.. ..+.|
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~-v~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~~~g~~~~~~~~G 97 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDK-LSYEIVDFDTPEGKELAKRYRIDR-APATTITQDGKDFGVRYFG 97 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTT-EEEEEEETTSHHHHHHHHHTTCCS-SSEEEEEETTBCCSEEEES
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCc-eEEEEEeCCCcccHHHHHHcCCCc-CceEEEEcCCceeeEEEec
Confidence 356678999999 999999999999999965 443 9999999999 999999999997 9999999988753 44558
Q ss_pred CCCHHHHHHHHHhhCCC-ccccccccccHHHHhhcccCCCcE-EEEEeccCC------chHHHHHHHHhhcC----CCeE
Q psy12972 948 SFSVQKMVEFFRLKLPY-KLIVPLSATNVDAFLDNWREDNKV-HALLFQRSL------PVRLRYLINAFKHR----TTIV 1015 (1578)
Q Consensus 948 ~~s~~~L~~fi~~~lp~-~vv~~it~~~~~~fl~~~~~~~~~-~VlfF~~~~------~~~~~~~~~a~~~~----~~v~ 1015 (1578)
.++.+++.+|+...+.. .-...++.++++.+.... ..+ ++.|+..-. .+.+..+. ..+. +.+.
T Consensus 98 ~~~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~---~~~~~v~F~a~wC~~C~~~~p~~~~l~--~~~~~~~~~~v~ 172 (226)
T 1a8l_A 98 LPAGHEFAAFLEDIVDVSREETNLMDETKQAIRNID---QDVRILVFVTPTCPYCPLAVRMAHKFA--IENTKAGKGKIL 172 (226)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCC---SCEEEEEEECSSCTTHHHHHHHHHHHH--HHHHHTTCCCEE
T ss_pred cCcHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcC---CCcEEEEEeCCCCCccHHHHHHHHHHH--HhcccccCCcEE
Confidence 88889999999775421 113345667777765442 444 444442211 22222222 2232 4788
Q ss_pred EEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1016 FGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1016 Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
|+.++++ .+..++++|+|.+ .||+++|+++... ....+..+...+.+|++.
T Consensus 173 ~~~vd~~--~~~~l~~~~~v~~-~Pt~~~~~~G~~~---~~~~G~~~~~~l~~~l~~ 223 (226)
T 1a8l_A 173 GDMVEAI--EYPEWADQYNVMA-VPKIVIQVNGEDR---VEFEGAYPEKMFLEKLLS 223 (226)
T ss_dssp EEEEEGG--GCHHHHHHTTCCS-SCEEEEEETTEEE---EEEESCCCHHHHHHHHHH
T ss_pred EEEEEcc--cCHHHHHhCCCcc-cCeEEEEeCCcee---EEEcCCCCHHHHHHHHHH
Confidence 8888554 6788999999987 5799999654221 122344455667777654
No 38
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.52 E-value=1.7e-14 Score=143.33 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=95.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+++. +.++.||++.++++|++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 76 (112)
T 2voc_A 3 IVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK-LKIVKIDVDENQETAGKYGVMS-IPTLL 76 (112)
T ss_dssp CEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT-CEEEEEETTTCCSHHHHTTCCS-BSEEE
T ss_pred eEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcCCCc-ccEEE
Confidence 3578999999877 3689999999999999999999999999999864 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+|++|+....+.|..+.++|.+|+.+.++++
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 77 VLKDGEVVETSVGFKPKEALQELVNKHLLEH 107 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTSCSC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHHHhh
Confidence 9999998777779999999999999988763
No 39
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=8.2e-15 Score=138.00 Aligned_cols=73 Identities=45% Similarity=0.836 Sum_probs=66.5
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+....|+|++|||+++++.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3446799999999999999999999999999999999975 367889999999999999999999999988654
No 40
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=8.8e-15 Score=140.89 Aligned_cols=73 Identities=42% Similarity=0.756 Sum_probs=66.8
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
+....|+|++|||+++++.++||++||+++++||||+++. +.++++|++|++||++|+||.+|+.||..+...
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 5 SSGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 3446799999999999999999999999999999999875 478899999999999999999999999988764
No 41
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.51 E-value=1.4e-14 Score=142.69 Aligned_cols=104 Identities=21% Similarity=0.336 Sum_probs=94.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 6 v~~l~~~~~~~~~~~~--~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 81 (111)
T 3gnj_A 6 LEKLDTNTFEQLIYDE--GKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEEEKTLFQRFSLKG-VPQIL 81 (111)
T ss_dssp SEECCHHHHHHHHTTS--CCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTCCS-SCEEE
T ss_pred ceecCHHHHHHHHHhc--CCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCcChhHHHhcCCCc-CCEEE
Confidence 4568999999987544 689999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 82 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 9999998877779999999999998765
No 42
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.49 E-value=6.8e-15 Score=151.34 Aligned_cols=103 Identities=11% Similarity=0.135 Sum_probs=94.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.+|+++|++.+. ++++++|.||++| |++|+.++|.++++|+++.+..+.|++||.+++++++.+|||.+ .||++
T Consensus 21 ~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~s-IPTli 96 (140)
T 2qgv_A 21 PVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFR-FPATL 96 (140)
T ss_dssp ECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCS-SSEEE
T ss_pred cCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCcc-CCEEE
Confidence 689999999882 4789999999999 99999999999999999976448999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+.+....|..+.+.|.+++.+.+.
T Consensus 97 lFk~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 99999998888899999999999987763
No 43
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.49 E-value=3.3e-14 Score=139.48 Aligned_cols=104 Identities=21% Similarity=0.475 Sum_probs=93.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 4 v~~l~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (108)
T 2trx_A 4 IIHLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 79 (108)
T ss_dssp EEECCTTTHHHHTTT--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTTCCS-SSEEE
T ss_pred ceecchhhHHHHHHh--cCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcCCcc-cCEEE
Confidence 457899999976643 4789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 80 LFKNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 9999998777779999999999998754
No 44
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=2.6e-14 Score=145.74 Aligned_cols=104 Identities=22% Similarity=0.364 Sum_probs=93.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhC----CCceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELS----PLGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~----~~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
++.++.++|.+.+... +++++|.||++||++|+.+.|.|+++++.++ +. +.++.|||+.+.++|++|+|.+ +
T Consensus 9 v~~l~~~~~~~~~~~~--~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~ 84 (133)
T 1x5d_A 9 VIELTDDSFDKNVLDS--EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGK-VKLAAVDATVNQVLASRYGIRG-F 84 (133)
T ss_dssp CEECCTTHHHHHTTTS--SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTS-EEEEEEETTTCCHHHHHHTCCS-S
T ss_pred CEEcCHhhHHHHHhcC--CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCc-EEEEEEECCCCHHHHHhCCCCe-e
Confidence 4578999999877543 6899999999999999999999999999986 44 9999999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
||+++|.+|+....+.|.++.++|.+|+.+.+
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999987777779999999999998765
No 45
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.49 E-value=3e-14 Score=141.95 Aligned_cols=107 Identities=21% Similarity=0.378 Sum_probs=94.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+++. .+.++.|||+.++++|++|+|.+ +||
T Consensus 9 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt 84 (120)
T 1mek_A 9 VLVLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG-YPT 84 (120)
T ss_dssp EEECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS-SSE
T ss_pred cEEechhhHHHHH---ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc-ccE
Confidence 4578999999866 34789999999999999999999999999998753 49999999999999999999998 999
Q ss_pred EEEEcCCccc--cccCCCCCHHHHHHHHHhhCCCc
Q psy12972 933 IALLTDGRTS--FFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 933 l~lf~~G~~~--~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+++|++|+.. ..+.|..+.++|.+|+.+.++++
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 9999999865 66679999999999999988653
No 46
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.49 E-value=5.1e-13 Score=150.12 Aligned_cols=211 Identities=13% Similarity=0.152 Sum_probs=161.7
Q ss_pred cccccccccHHHHhhcccCCCcEEEEEeccCCchHHHHHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCCCCcEEEEe
Q psy12972 966 LIVPLSATNVDAFLDNWREDNKVHALLFQRSLPVRLRYLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPGDKDSLLIF 1045 (1578)
Q Consensus 966 vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~~~~~~~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvf 1045 (1578)
.+.+.|.+++++|++++ +.++|+||.+..++....+..++...+.+.|+.+ .+++++++++++. |+|++|
T Consensus 11 ~~~l~s~~~~~~~l~~~---~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~~t-----~~~~v~~~~~v~~--p~i~lf 80 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKFPGVSFGIS-----TDSEVLTHYNITG--NTICLF 80 (227)
T ss_dssp CEECCSHHHHHHHHHTS---SEEEEEECSCSCSTHHHHHHHHTTTCTTSEEEEE-----CCHHHHHHTTCCS--SEEEEE
T ss_pred CeeeCCHHHHHHHHhcC---CeEEEEEecCCCchhHHHHHHHHHhCCCceEEEE-----CCHHHHHHcCCCC--CeEEEE
Confidence 35566778999999875 7888999988778888888877765578999998 6889999999974 899999
Q ss_pred ccCCCCCcccccc--CCCCchhhhhhhhcCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhc
Q psy12972 1046 KEDKDRPSASITM--NSIPVPTLQDITDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQES 1122 (1578)
Q Consensus 1046 k~~~~~~~~~l~~--~~l~~~~L~~fI~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~ 1122 (1578)
+...+.+..+... +..+...|.+||..+.+|+++++|..+..+..-...+++++++.+ ...+.+.....++++|++
T Consensus 81 k~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~- 159 (227)
T 4f9z_D 81 RLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKL- 159 (227)
T ss_dssp ETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHH-
T ss_pred EecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHH-
Confidence 8644444333211 246778899999999999999999988655442222567776754 456678889999999999
Q ss_pred cCCCCcEEEEEEecC--cchHHHHhccCCCCCCccccceeEEEEEcCCc-ceEeeccCCcccccccccccHHHHHHHhhh
Q psy12972 1123 RFVHNNIAFMYVFIE--KQPEFVNALTSPEDSSEISLHIAAMWRMDYKK-IKYGWLLGDAVDDWKDYNTTKDRLDAGLRS 1199 (1578)
Q Consensus 1123 ~~~~~~v~F~~vd~~--~q~~~~~~f~~~~~~~~~~~~lp~l~~~n~~~-~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ 1199 (1578)
|+++ +.|+|+|++ ..+..++.|.... .++|.+.+.+..+ .+|.+..+ ++|.+.|..|++.
T Consensus 160 -~k~~-i~F~~vd~~~~~~~~~l~~fgl~~------~~~P~~~i~~~~~~~ky~~~~~---------~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 160 -FQGK-ILFILVDSGMKENGKVISFFKLKE------SQLPALAIYQTLDDEWDTLPTA---------EVSVEHVQNFCDG 222 (227)
T ss_dssp -TTTT-CEEEEEETTSGGGHHHHHHTTCCG------GGCSEEEEEESSSCCEEEETTC---------CCCHHHHHHHHHH
T ss_pred -hhCC-EEEEEeCCccHhHHHHHHHcCCCc------ccCCEEEEEECCCCccccCCcC---------CCCHHHHHHHHHH
Confidence 9987 999999996 4667888873221 4789888888766 46765433 3689999999999
Q ss_pred hhcCC
Q psy12972 1200 LVNDP 1204 (1578)
Q Consensus 1200 ll~g~ 1204 (1578)
++.|.
T Consensus 223 ~~~Gk 227 (227)
T 4f9z_D 223 FLSGK 227 (227)
T ss_dssp HHTTC
T ss_pred HhCCC
Confidence 99984
No 47
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.49 E-value=4.3e-14 Score=137.85 Aligned_cols=102 Identities=17% Similarity=0.304 Sum_probs=93.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.+++.++|++.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 5 v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (106)
T 3die_A 5 IVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEVMS-IPTLI 78 (106)
T ss_dssp CEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-BSEEE
T ss_pred eEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCCcc-cCEEE
Confidence 4578999999977 3789999999999999999999999999999876 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 79 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 79 VFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred EEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 9999998877779999999999998653
No 48
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.49 E-value=2.8e-14 Score=139.95 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=78.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.++|++.+ +.+++++|.|||+||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 7 ~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~ 80 (105)
T 4euy_A 7 TIEELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQDMQEIAGRYAVFT-GPTVLLFYN 80 (105)
T ss_dssp ---CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECCC---------CC-CCEEEEEET
T ss_pred CHHHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 567888876 457999999999999999999999999999984 49999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|..+.++|.+++.+.+
T Consensus 81 G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 81 GKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CeEEEEEeCCcCHHHHHHHHHHhh
Confidence 998877779999999999998764
No 49
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.48 E-value=1.9e-14 Score=132.32 Aligned_cols=66 Identities=41% Similarity=0.750 Sum_probs=61.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
..|+|++|||+++++.++||++||++++++|||+++. +.++|++|++||++|+||.+|+.||.+|.
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 5799999999999999999999999999999999864 36899999999999999999999999875
No 50
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.48 E-value=8.2e-15 Score=171.63 Aligned_cols=202 Identities=16% Similarity=0.216 Sum_probs=133.3
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeec---ccCccccccCCcccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYD---LFGTTDGFSGQDSAS 822 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~---~~~~~~~i~g~~~~~ 822 (1578)
.+.++..||++.+. +++++++|+||||||+||++++|.|+++|+.+++. .++.++|..+ .+|+..++.++
T Consensus 19 vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~---- 92 (298)
T 3ed3_A 19 ISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF---- 92 (298)
T ss_dssp CEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS----
T ss_pred eEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc----
Confidence 46778889999884 46789999999999999999999999999999874 5566666432 25555555554
Q ss_pred ccccccccCcccccccccc------------------ccCccC----ccccee-------EEEee-ccccccceecccCC
Q psy12972 823 RNFHNHMYNPFDDVFSEGF------------------NFPFEE----HDISLF-------HKLST-THWNFEKNYIPKSY 872 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~~------------------~~~~~~----~~i~~~-------~vi~L-t~~nF~~~vl~~s~ 872 (1578)
||+.+|..+- ...|.+ +.+..+ .+..+ +.+++++.+.. .
T Consensus 93 ---------Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~--~ 161 (298)
T 3ed3_A 93 ---------PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK--S 161 (298)
T ss_dssp ---------SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS--C
T ss_pred ---------ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc--C
Confidence 8887877552 122332 222221 22344 44566665522 2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhH--hHcC-----c-------------cccCCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLA--RRLG-----V-------------GSQLPQ 932 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~--~k~g-----V-------------~~~~PT 932 (1578)
+.+.+|.| +.- ....+.|+++|..+.+. +.|+.++..+-..+. ++++ | .. .|+
T Consensus 162 ~~~~vi~f-s~~----~~~~~~f~~~A~~~~~~-~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~-~P~ 234 (298)
T 3ed3_A 162 PKLSVVLF-SKQ----DKISPVYKSIALDWLGK-FDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSD-KSK 234 (298)
T ss_dssp SSEEEEEE-ESS----SSCCHHHHHHHHHTBTT-EEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCS-SCE
T ss_pred CceEEEEE-cCC----CcchHHHHHHHHHhhcC-cEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccC-CCe
Confidence 46666666 332 34568999999999886 999999865433333 3333 3 54 899
Q ss_pred EEEEcC--CccccccCCCCCHHHHHHHHHhhCC-Ccccccccc
Q psy12972 933 IALLTD--GRTSFFKEPSFSVQKMVEFFRLKLP-YKLIVPLSA 972 (1578)
Q Consensus 933 l~lf~~--G~~~~y~~G~~s~~~L~~fi~~~lp-~~vv~~it~ 972 (1578)
|++|+. ++...|.++..+.++|.+||.++.. .+.+..+|.
T Consensus 235 lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~ 277 (298)
T 3ed3_A 235 LVVFDADKDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFSR 277 (298)
T ss_dssp EEEEETTTTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSH
T ss_pred EEEEcCCCCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCch
Confidence 999974 4455555457899999999984331 123444544
No 51
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.48 E-value=4.1e-14 Score=139.22 Aligned_cols=102 Identities=22% Similarity=0.401 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.+|.++|++.+. +++++|.||++||++|+.+.|.|+++++.+... ++.++.|||+.++++|++|+|.+ +||
T Consensus 7 v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~-~Pt 81 (111)
T 3uvt_A 7 VLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRG-YPT 81 (111)
T ss_dssp SEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred ceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCc-ccE
Confidence 35789999999874 679999999999999999999999999987633 49999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+++|++|+....+.|..+.++|.+|+.++
T Consensus 82 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999999887788999999999999875
No 52
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.48 E-value=4e-14 Score=178.73 Aligned_cols=224 Identities=13% Similarity=0.069 Sum_probs=135.4
Q ss_pred HHHHhcCCCCCCh----hHHHHHH---------------------HHhhhcCCCChHHHHHH----HhhhhcCccccccc
Q psy12972 309 GQGMVSLDHVLPR----QYPHTLR---------------------ALQDKCLLREKGEVDQL----FLEDFGCTHSQLFR 359 (1578)
Q Consensus 309 GQ~lstr~dllP~----~~~~~L~---------------------~Lqd~~p~~~~~~~~~~----~~~~~g~~~~~~~~ 359 (1578)
||+++|+.+++|+ +.++++. .+||++|+.+.+.+.++ ....++....+++.
T Consensus 73 ~~f~~t~~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v~~~~~~~l~~~~~~~~~~ 152 (543)
T 3c4z_A 73 QQFLRTHEQHGPALQLWKDIEDYDTADDALRPQKAQALRAAYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLA 152 (543)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHHHCC---CTTHHHHHHHHH
T ss_pred HHHHhcCCchhHHHHHHhhhhhhccCchhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhhhcCCCchhhHHHHHHHHH
Confidence 8999999999999 7888888 67788888777766655 12222212222222
Q ss_pred ccCCCchhHHHHHHHHHhhhhhhhhhhHHHHHH----HHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEE
Q psy12972 360 SFDENPIAAASLAQALQDKCLLREKGEVDQLFL----EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKV 434 (1578)
Q Consensus 360 ~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~~~----~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKV 434 (1578)
.+...|+.... ......+.+. +..+... +-|... +.||.|++|+||+|+.+ +|+.||||+
T Consensus 153 ~~~~~p~~~~~------------~~~~~~~~~~~~~~~~~~~~~-~~f~~~--~~LG~G~fG~Vy~a~~~~tg~~vAiK~ 217 (543)
T 3c4z_A 153 HLGQAPFQEFL------------DSLYFLRFLQWKWLEAQPMGE-DWFLDF--RVLGRGGFGEVFACQMKATGKLYACKK 217 (543)
T ss_dssp HHTTHHHHHHH------------TSHHHHHHHHHHHHHTSCCCG-GGEEEE--EEEEECSSSEEEEEEETTTCCEEEEEE
T ss_pred hhhcCchHhhh------------hhhhhhhhhhhhhhhcccCCh-hheEEE--EEEeeCCCeEEEEEEECCCCcEEEEEE
Confidence 22222221100 0000001111 1111111 223332 67999999999999975 799999999
Q ss_pred ecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCC
Q psy12972 435 QYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSS 514 (1578)
Q Consensus 435 q~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t 514 (1578)
........ ....-.+.+|.+.+.++. ++.|.-..-+....+
T Consensus 218 l~k~~~~~----------------------------------~~~~~~~~~E~~iL~~l~-----hp~Iv~l~~~~~~~~ 258 (543)
T 3c4z_A 218 LNKKRLKK----------------------------------RKGYQGAMVEKKILAKVH-----SRFIVSLAYAFETKT 258 (543)
T ss_dssp EEHHHHHH----------------------------------TTCHHHHHHHHHHHHHCC-----CTTBCCEEEEEECSS
T ss_pred EEhHHhhh----------------------------------hHHHHHHHHHHHHHHhcC-----CCCEeeEEEEEeeCC
Confidence 86432110 001123456776666652 343322222223345
Q ss_pred ceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 515 TRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 515 ~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
..+|||||++|.+|.+..... ..+++...+...+.+++ +..+|..|++|+|+||+|||+. .++++|||....
T Consensus 259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~ 338 (543)
T 3c4z_A 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE 338 (543)
T ss_dssp EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence 568999999999998763311 22467666665555555 7889999999999999999964 699999998643
No 53
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=4.5e-14 Score=145.59 Aligned_cols=106 Identities=21% Similarity=0.333 Sum_probs=94.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC--ceEEEEEECccchhhHhHcCccccCCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~--~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
++.++.++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. ++.++.|||+.+.++|++|+|.+ +||
T Consensus 19 v~~l~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt 94 (140)
T 2dj1_A 19 VWVLNDGNFDNFV---ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSG-YPT 94 (140)
T ss_dssp EEECCTTTHHHHH---TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCS-SSE
T ss_pred CEEcChHhHHHHH---hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCc-cCe
Confidence 5678999999876 34789999999999999999999999999999764 39999999999999999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
+++|++|+ ...+.|.++.++|.+|+.+.+.++
T Consensus 95 ~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 95 IKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp EEEEETTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred EEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 99999998 555669999999999999887654
No 54
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.48 E-value=6e-14 Score=137.11 Aligned_cols=103 Identities=17% Similarity=0.377 Sum_probs=93.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 4 v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (107)
T 2i4a_A 4 TLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK-VTVAKVNIDDNPETPNAYQVRS-IPTLM 79 (107)
T ss_dssp EEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS-EEEEEEETTTCCHHHHHTTCCS-SSEEE
T ss_pred eeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc-EEEEEEECCCCHHHHHhcCCCc-cCEEE
Confidence 46789999997764 34789999999999999999999999999999864 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.|..+.+.|.+|+.+.
T Consensus 80 ~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 80 LVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred EEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 999999877777999999999999765
No 55
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.48 E-value=7.8e-14 Score=141.86 Aligned_cols=104 Identities=23% Similarity=0.361 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|++.+.. .+++++|.||++||++|+.+.|.++++++.+++. +.++.|||+.+.++|++|+|.+ +||++
T Consensus 19 v~~l~~~~f~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 94 (130)
T 2dml_A 19 VIELTPSNFNREVIQ--SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGVQG-FPTIK 94 (130)
T ss_dssp SEECCTTTHHHHTTT--CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTCCS-SSEEE
T ss_pred cEECCHHHHHHHHhc--CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCCCc-cCEEE
Confidence 346889999986653 3789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCcc-ccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRT-SFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~-~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+|.. ...+.|.++.++|.+|+.+.+
T Consensus 95 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 95 IFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp EESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 9988765 556679999999999998765
No 56
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.47 E-value=3.8e-14 Score=138.81 Aligned_cols=103 Identities=20% Similarity=0.327 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 6 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~i~~-~Pt~~ 80 (109)
T 3tco_A 6 TLVLTEENFDEVI---RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDENQKIADKYSVLN-IPTTL 80 (109)
T ss_dssp CEECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred EEEecHHHHHHHH---hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEccccCHHHHHhcCccc-CCEEE
Confidence 3568999999877 34789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 81 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 9999998877779999999999998764
No 57
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.47 E-value=5.7e-14 Score=150.85 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=92.3
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc-------CCCcccccccHHHHHHHHHhC-----CCceEEEEEECccchhhHh
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELS-----PLGVGFFTVHVHNEQGLAR 922 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya-------pwCg~Ck~l~p~~~~lA~~l~-----~~~v~~a~VDc~~~~~L~~ 922 (1578)
++++|++||++.+. .+.+.+++|.||| +||++|+.+.|+|+++|+++. +. +.|++||+++++++++
T Consensus 20 vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~-v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 20 VITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSL-NLFFTVDVNEVPQLVK 97 (178)
T ss_dssp EEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCC-EEEEEEETTTCHHHHH
T ss_pred CEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCC-EEEEEEECccCHHHHH
Confidence 56899999998663 3346789999999 499999999999999999986 54 9999999999999999
Q ss_pred HcCccccCCcEEEEcCCcccc------------cc---CC-CCCHHHHHHHHHhhCCCc
Q psy12972 923 RLGVGSQLPQIALLTDGRTSF------------FK---EP-SFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 923 k~gV~~~~PTl~lf~~G~~~~------------y~---~G-~~s~~~L~~fi~~~lp~~ 965 (1578)
+|||++ +|||++|++|.... .| .| .++++.|.+||.+.++..
T Consensus 98 ~~~I~s-iPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~ 155 (178)
T 3ga4_A 98 DLKLQN-VPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNIS 155 (178)
T ss_dssp HTTCCS-SCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCC
T ss_pred HcCCCC-CCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCC
Confidence 999998 99999999886332 12 24 799999999999988754
No 58
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.47 E-value=4.8e-14 Score=163.74 Aligned_cols=107 Identities=21% Similarity=0.349 Sum_probs=97.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ ..+.+++++|.||++||++|+.+.|.|+++++.+.+. +.|++|||+.++++|++|+|.+ +||++
T Consensus 9 v~~~~~~~f~~~~-~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 85 (287)
T 3qou_A 9 IVNINESNLQQVL-EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDAEQMIAAQFGLRA-IPTVY 85 (287)
T ss_dssp EEECCTTTHHHHH-TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTTCHHHHHTTTCCS-SSEEE
T ss_pred cEECCHHHHHHHH-HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCccCHHHHHHcCCCC-CCeEE
Confidence 5679999999955 4445899999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+.+..+.|..+.+.+.+|+...+|.
T Consensus 86 ~~~~G~~~~~~~g~~~~~~l~~~l~~~lp~ 115 (287)
T 3qou_A 86 LFQNGQPVDGFQGPQPEEAIRALLDXVLPR 115 (287)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EEECCEEEEEeeCCCCHHHHHHHHHHHcCC
Confidence 999999887777999999999999998865
No 59
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.47 E-value=5e-14 Score=139.27 Aligned_cols=105 Identities=19% Similarity=0.371 Sum_probs=93.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+.+. +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 7 v~~l~~~~~~~~~~~~--~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 82 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKN--DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDENPGTAAKYGVMS-IPTLN 82 (112)
T ss_dssp CEEECTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred EEecchhhHHHHHhhC--CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCCCHHHHHhCCCCc-ccEEE
Confidence 3568999998877543 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+++.+.++
T Consensus 83 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 83 VYQGGEVAKTIVGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999987777799999999999987653
No 60
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.47 E-value=7.3e-14 Score=138.34 Aligned_cols=105 Identities=18% Similarity=0.387 Sum_probs=94.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 9 v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 84 (115)
T 1thx_A 9 VITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDPNPTTVKKYKVEG-VPALR 84 (115)
T ss_dssp EEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTTCHHHHHHTTCCS-SSEEE
T ss_pred eEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCCCHHHHHHcCCCc-eeEEE
Confidence 56789999998764 34789999999999999999999999999999876 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+|+.+.++
T Consensus 85 ~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 85 LVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 99999887767799999999999988764
No 61
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.47 E-value=5.1e-14 Score=137.38 Aligned_cols=103 Identities=18% Similarity=0.351 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 2 v~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 76 (105)
T 1nsw_A 2 TMTLTDANFQQAI---QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDENPETTSQFGIMS-IPTLI 76 (105)
T ss_dssp CEEECTTTHHHHH---SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceeccHHhHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcCCHHHHHHcCCcc-ccEEE
Confidence 3578899999544 34689999999999999999999999999999775 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+++.+.+
T Consensus 77 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 77 LFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred EEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 9999988776779999999999987654
No 62
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.47 E-value=2.8e-14 Score=148.44 Aligned_cols=101 Identities=9% Similarity=0.198 Sum_probs=88.4
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.++|++.|.. ..+++++|.|||+||++|+.+.|.++++|+++.+. +.|++||.+++++++++|+|.+ .||+++|++
T Consensus 28 t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~s-iPT~~fFk~ 104 (160)
T 2av4_A 28 SGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYD-PVSVMFFYR 104 (160)
T ss_dssp SHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCS-SEEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCC-CCEEEEEEC
Confidence 45789888753 24789999999999999999999999999999876 9999999999999999999997 999999999
Q ss_pred Cccc--c-------ccCCCCC-HHHHHHHHHhhC
Q psy12972 939 GRTS--F-------FKEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~--~-------y~~G~~s-~~~L~~fi~~~l 962 (1578)
|+.+ . ...|... .++|.+++...+
T Consensus 105 G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 105 NKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp TEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 9886 3 4557766 888999987665
No 63
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.47 E-value=4.3e-14 Score=146.43 Aligned_cols=106 Identities=18% Similarity=0.302 Sum_probs=96.0
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+... +++++|.||++||++|+.+.|.|+++++.+.+. +.|+.|||+.++++|++|+|.+ +||++
T Consensus 8 v~~l~~~~f~~~~~~~--~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 83 (140)
T 3hz4_A 8 IIEFEDMTWSQQVEDS--KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIATNPWTAEKYGVQG-TPTFK 83 (140)
T ss_dssp EEEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTTCHHHHHHHTCCE-ESEEE
T ss_pred eEEcchHhHHHHHHhC--CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCcCHhHHHHCCCCc-CCEEE
Confidence 4578999999666543 899999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 84 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 84 FFCHGRPVWEQVGQIYPSILKNAVRDMLQH 113 (140)
T ss_dssp EEETTEEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHhcc
Confidence 999999887777999999999999988743
No 64
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=6.1e-14 Score=142.09 Aligned_cols=103 Identities=23% Similarity=0.338 Sum_probs=90.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|++.+ +++++|.||++||++|+.+.|.++++++.+.+.++.++.||++.+.++|++|+|.+ +||++
T Consensus 9 v~~l~~~~f~~~~-----~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 82 (126)
T 1x5e_A 9 VRVITDENWRELL-----EGDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINA-LPTIY 82 (126)
T ss_dssp EEECCTTTHHHHT-----SSEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cEEecHHHHHHHh-----CCCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcc-cCEEE
Confidence 5578999999855 23499999999999999999999999999876459999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+. ..+.|..+.++|.+|+.+.+..
T Consensus 83 ~~~~G~~-~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 83 HCKDGEF-RRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp EEETTEE-EECCSCCCHHHHHHHHHTCGGG
T ss_pred EEeCCeE-EEeecCCCHHHHHHHHHHHhhc
Confidence 9999985 5566999999999999987744
No 65
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.46 E-value=7.2e-14 Score=136.82 Aligned_cols=104 Identities=16% Similarity=0.352 Sum_probs=93.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.+|.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (107)
T 1dby_A 3 AGAVNDDTFKNVVLES--SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDESPNVASEYGIRS-IPTIM 78 (107)
T ss_dssp CEEECHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHHTCCS-SCEEE
T ss_pred cEeccHHHHHHHHhcC--CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCCCHHHHHHCCCCc-CCEEE
Confidence 3568899999876543 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.+++.+++.+.+
T Consensus 79 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 79 VFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp EESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999998776779899999999998764
No 66
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.8e-14 Score=140.49 Aligned_cols=71 Identities=34% Similarity=0.563 Sum_probs=65.6
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....|+|+||||+++++.++||+|||+++++||||+++ ++.+.++|++|++||++|+|+.+|+.||.....
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 44679999999999999999999999999999999996 578899999999999999999999999986554
No 67
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.46 E-value=2e-14 Score=139.91 Aligned_cols=69 Identities=46% Similarity=0.854 Sum_probs=63.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.|+|++|||++++|.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 589999999999999999999999999999999975 458899999999999999999999999988654
No 68
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.46 E-value=3.1e-14 Score=137.65 Aligned_cols=71 Identities=30% Similarity=0.666 Sum_probs=64.9
Q ss_pred cccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC-------hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 634 AVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND-------PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-------~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
....|+|+||||+++++.++||+|||+++++||||+++. +.+.++|++|++||++|+||.+|+.||.....
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 346799999999999999999999999999999999863 56889999999999999999999999987654
No 69
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.46 E-value=5.1e-15 Score=174.10 Aligned_cols=102 Identities=34% Similarity=0.565 Sum_probs=0.0
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCCCCCCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTDGFSGQDS 712 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~~~~~~~~ 712 (1578)
.+...|||++|||+++||.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||+++......++..
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 34457999999999999999999999999999999999888899999999999999999999999999854422111111
Q ss_pred CCcccCCCC--CCCcccccccCCCC
Q psy12972 713 ASRNFHNHM--YNPFDDVFSEGFNF 735 (1578)
Q Consensus 713 ~~~~~~~~~--~~~f~~~F~~~Fg~ 735 (1578)
+.++.+.+ ..+|.++|+.+||.
T Consensus 104 -~~~~~~~~f~~~~f~diF~~~Fg~ 127 (329)
T 3lz8_A 104 -QRQTHEQSYSQQDFDDIFSSMFGQ 127 (329)
T ss_dssp -------------------------
T ss_pred -ccccccCCcCCCchhhhhHhhhcC
Confidence 00100111 23577888877763
No 70
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.46 E-value=4.5e-14 Score=141.45 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=90.0
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
..|.++|++.+.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.|+.||++.+++++++|+|.+ +||+++|
T Consensus 16 ~~t~~~f~~~l~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~ 91 (116)
T 3qfa_C 16 IESKTAFQEALDA-AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASECEVKS-MPTFQFF 91 (116)
T ss_dssp CCCHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTTTHHHHHHTTCCS-SSEEEEE
T ss_pred CCCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCcc-ccEEEEE
Confidence 4678899987632 2589999999999999999999999999999876 8999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|+.+..+.|. +.++|.+++.+.+
T Consensus 92 ~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 92 KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 999988777787 9999999998753
No 71
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.46 E-value=7.3e-14 Score=142.63 Aligned_cols=104 Identities=20% Similarity=0.442 Sum_probs=93.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++.++.++|++.+. +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 24 v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 99 (128)
T 2o8v_B 24 IIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLL 99 (128)
T ss_dssp SEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTTCCTTSGGGTCCS-SSEEE
T ss_pred cEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCc-cCEEE
Confidence 35689999997664 34789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 100 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 100 LFKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 9999998776779999999999998754
No 72
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.45 E-value=8.1e-14 Score=140.05 Aligned_cols=104 Identities=16% Similarity=0.277 Sum_probs=93.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..+|.++|.+.+.+. +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.+++++|+|.+ +||++
T Consensus 15 ~~~~~~~~f~~~v~~~--~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~ 90 (119)
T 1w4v_A 15 FNIQDGPDFQDRVVNS--ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK-VVMAKVDIDDHTDLAIEYEVSA-VPTVL 90 (119)
T ss_dssp EECCSHHHHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS-SEEEEEETTTTHHHHHHTTCCS-SSEEE
T ss_pred EEecChhhHHHHHHcC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCCCCHHHHHHcCCCc-ccEEE
Confidence 5678999999877643 789999999999999999999999999999765 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|++|+....+.|..+.++|.+|+.+.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9999988766779889999999998754
No 73
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.45 E-value=7.7e-14 Score=147.48 Aligned_cols=105 Identities=21% Similarity=0.331 Sum_probs=95.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.+.++.++|.+.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. +.|++||++.+++++++|+|.+ +||++
T Consensus 49 ~~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~~~~l~~~~~i~~-~Pt~~ 123 (155)
T 2ppt_A 49 VAGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQAHPAVAGRHRIQG-IPAFI 123 (155)
T ss_dssp EEECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTSTHHHHHTTCCS-SSEEE
T ss_pred CccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCccHHHHHHcCCCc-CCEEE
Confidence 4578889999877 45789999999999999999999999999999875 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 124 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 153 (155)
T 2ppt_A 124 LFHKGRELARAAGARPASELVGFVRGKLGA 153 (155)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHC-
T ss_pred EEeCCeEEEEecCCCCHHHHHHHHHHHhcc
Confidence 999999887777999999999999987754
No 74
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.45 E-value=7.4e-14 Score=136.60 Aligned_cols=105 Identities=21% Similarity=0.369 Sum_probs=92.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
++++|.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 77 (109)
T 2yzu_A 3 PIEVTDQNFDETL---GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDENPKTAMRYRVMS-IPTVI 77 (109)
T ss_dssp CEECCTTTHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceEccHhHHHHHh---cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCCCHhHHHhCCCCc-CCEEE
Confidence 3578999999654 34789999999999999999999999999999865 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 78 ~~~~g~~~~~~~g~~~~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 78 LFKDGQPVEVLVGAQPKRNYQAKIEKHLPA 107 (109)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHTTC--
T ss_pred EEeCCcEeeeEeCCCCHHHHHHHHHHHhhh
Confidence 999998776667989999999999988754
No 75
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.45 E-value=1.1e-13 Score=134.79 Aligned_cols=102 Identities=14% Similarity=0.370 Sum_probs=92.0
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||+++
T Consensus 3 ~~~~~~~~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 78 (105)
T 1fb6_A 3 QDVNDSSWKEFVLE--SEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDEAPGIATQYNIRS-IPTVLF 78 (105)
T ss_dssp EECCTTTHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred eechhhhHHHHHhc--CCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcchHHHHHhCCCCc-ccEEEE
Confidence 46889999987654 3789999999999999999999999999999875 9999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.|..+.+.+.+++.+.
T Consensus 79 ~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 79 FKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp EETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred EeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 99999877677889999999999765
No 76
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=3.2e-14 Score=141.90 Aligned_cols=73 Identities=33% Similarity=0.540 Sum_probs=67.6
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTTD 705 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~~ 705 (1578)
.....|+|++|||+++++.++||+|||+++++||||+++ ++.+.++|++|++||++|+||.+|+.||.++..+
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 345689999999999999999999999999999999997 6789999999999999999999999999987653
No 77
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.44 E-value=1.3e-13 Score=165.40 Aligned_cols=147 Identities=10% Similarity=0.073 Sum_probs=100.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
.+||+|++|.||+|+..+|++|||||.+++....- .+ + .... +............ ..+--..|.+
T Consensus 101 ~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr--~v---~---~~r~-~~~~~~~~~~~~~------~rl~A~kE~~ 165 (397)
T 4gyi_A 101 SRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFR--TV---K---ANRD-YLRNRSTGSWMYL------SRLAAIKEFA 165 (397)
T ss_dssp EEEEECSSEEEEEEECTTCCEEEEEEECTTEECCC--CC---C-----CE-ECTTSCHHHHHHH------HHHHHHHHHH
T ss_pred CEeeeCCceEEEEEECCCCCEEEEEEEecccccHH--HH---H---HHHH-HHHhhccccHHHH------HHHHHHHHHH
Confidence 68999999999999999999999999988653210 00 0 0000 0011111111111 1123357899
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
|+.++... .+.+|+|+. ..+++||||||+|.++.++... .++..+...++.+ +..+|..|+||||+||
T Consensus 166 nL~rL~~~-----gv~vp~p~~--~~~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~-l~~lH~~gIVHrDLKp 233 (397)
T 4gyi_A 166 FMKALYEE-----GFPVPEPIA--QSRHTIVMSLVDALPMRQVSSV----PDPASLYADLIAL-ILRLAKHGLIHGDFNE 233 (397)
T ss_dssp HHHHHHHT-----TCSCCCEEE--EETTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHH-HHHHHHTTEECSCCST
T ss_pred HHHHHHhc-----CCCCCeeee--ccCceEEEEecCCccHhhhccc----HHHHHHHHHHHHH-HHHHHHCCCcCCCCCH
Confidence 99999753 477888884 4577999999999998775321 2456666666654 5678999999999999
Q ss_pred CCCCCCe-------------eEEecCC
Q psy12972 569 GNDVNTW-------------LYPVDLG 582 (1578)
Q Consensus 569 GNilv~~-------------v~liDfG 582 (1578)
+|||+.. +++|||+
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~ 260 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFP 260 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCT
T ss_pred HHEEEeCCCCcccccccccceEEEEeC
Confidence 9999641 6677777
No 78
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.44 E-value=1.2e-13 Score=142.16 Aligned_cols=107 Identities=23% Similarity=0.426 Sum_probs=94.2
Q ss_pred EEeeccccccceecccC---------CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s---------~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g 925 (1578)
++.+|.++|.+.+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.++|++|+
T Consensus 11 v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~ 89 (136)
T 2l5l_A 11 VIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEKEQELAGAFG 89 (136)
T ss_dssp EEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTT
T ss_pred eEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHcC
Confidence 56788999998776422 4689999999999999999999999999999865 9999999999999999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|.+ +||+++| ++|+.. .+.|..+.++|.+|+.+.++.
T Consensus 90 v~~-~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 90 IRS-IPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp CCS-SCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred CCC-CCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 998 9999999 888876 445889999999999987754
No 79
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.44 E-value=7.4e-14 Score=135.19 Aligned_cols=102 Identities=23% Similarity=0.421 Sum_probs=92.3
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
+++|.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++
T Consensus 2 ~~l~~~~~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 75 (104)
T 2e0q_A 2 IHLDSKNFDSFL---ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDENPDIAARYGVMS-LPTVIF 75 (104)
T ss_dssp EECCTTTHHHHH---HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SCEEEE
T ss_pred eecCHHHHHHHH---hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCCCHHHHHhCCccc-cCEEEE
Confidence 468899999877 3478999999999999999999999999999876 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|++|+....+.|..+.+++.+|+.+.++
T Consensus 76 ~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 76 FKDGEPVDEIIGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EECCeEhhhccCCCCHHHHHHHHHHHhc
Confidence 9999887777799999999999987653
No 80
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.44 E-value=6e-14 Score=139.21 Aligned_cols=72 Identities=36% Similarity=0.728 Sum_probs=67.1
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCC-ChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNN-DPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.....|+|++|||+++++.++||+|||++++++|||+++ ++.+.++|++|++||++|+||.+|+.||.+|..
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~ 85 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSL 85 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccc
Confidence 455789999999999999999999999999999999997 478899999999999999999999999998865
No 81
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.44 E-value=1.3e-13 Score=143.85 Aligned_cols=105 Identities=23% Similarity=0.410 Sum_probs=96.0
Q ss_pred EEEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 854 HKLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 854 ~vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
.++.++.++|.+.+ ..+++++|.||++||++|+.+.|.|+++++.+.+. +.++.||++.+++++++|+|.+ +||+
T Consensus 39 ~v~~l~~~~~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v~~-~Pt~ 113 (148)
T 3p2a_A 39 EVINATAETLDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEAEPALSTRFRIRS-IPTI 113 (148)
T ss_dssp CCEECCTTTHHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred CceecCHHHHHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcCCHHHHHHCCCCc-cCEE
Confidence 35678999999877 45799999999999999999999999999999765 9999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|++|+.+..+.|..+.++|.+|+.+.+.
T Consensus 114 ~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 114 MLYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988778899999999999988764
No 82
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.3e-13 Score=136.49 Aligned_cols=106 Identities=11% Similarity=0.238 Sum_probs=88.2
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
++.++. ++|++.+.....+++++|.||++||++|+.+.|.++++++.++..++.++.||++.+++++++|+|.+ +||+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISA-VPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCc-ccEE
Confidence 346777 88988774324478999999999999999999999999998643459999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.|. ..++|.+++.+.+
T Consensus 81 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 81 IIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp EEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred EEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 999999988777786 4567999998765
No 83
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.43 E-value=1.4e-13 Score=137.88 Aligned_cols=106 Identities=20% Similarity=0.374 Sum_probs=94.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+..++.++|.+.+... +++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+|.+ +||++
T Consensus 14 v~~l~~~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~i~~-~Pt~~ 89 (121)
T 2i1u_A 14 TIKVTDASFATDVLSS--NKPVLVDFWATWCGPCKMVAPVLEEIATERATD-LTVAKLDVDTNPETARNFQVVS-IPTLI 89 (121)
T ss_dssp SEECCTTTHHHHTTTC--SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred ceecCHHHHHHHHHhC--CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHHHHhcCCCc-CCEEE
Confidence 3578999998876543 789999999999999999999999999999764 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|++|+....+.|..+.++|.+|+.+.++.
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDVVPN 119 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSCCCC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHHHhh
Confidence 999998877777999999999999877653
No 84
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.42 E-value=3.2e-13 Score=135.42 Aligned_cols=104 Identities=20% Similarity=0.328 Sum_probs=89.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCC----CceEEEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP----LGVGFFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~----~~v~~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
+..++.++|.+.+.. .+++++|.||++||++|+.+.|.|+++++.+++ .++.++.|||+.++ +++ +|.+ +
T Consensus 9 v~~l~~~~f~~~v~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~-~ 82 (121)
T 2djj_A 9 VTVVVAKNYNEIVLD--DTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG-F 82 (121)
T ss_dssp SEECCTTTTTTSSSC--TTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS-S
T ss_pred eEEecccCHHHHhhc--CCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc-C
Confidence 346899999987643 478999999999999999999999999999986 24999999999876 776 9997 9
Q ss_pred CcEEEEcCCcc--ccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALLTDGRT--SFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf~~G~~--~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
||+++|.+|.. ...+.|.++.++|.+|+.+.++.
T Consensus 83 Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 83 PTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp SEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred CeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 99999988754 55667999999999999988754
No 85
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.42 E-value=1.9e-13 Score=141.13 Aligned_cols=106 Identities=26% Similarity=0.487 Sum_probs=93.0
Q ss_pred EEeeccccccceecccC---------CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s---------~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g 925 (1578)
++.+|..+|...+.+.+ .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.++++|++|+
T Consensus 24 v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~ 102 (141)
T 3hxs_A 24 TIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDKEPELARDFG 102 (141)
T ss_dssp CEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTT
T ss_pred cccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHHcC
Confidence 45788999988776533 4789999999999999999999999999999875 9999999999999999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|.+ +||+++| ++|+.. .+.|..+.++|.+|+.+.+.
T Consensus 103 v~~-~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 103 IQS-IPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp CCS-SSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred CCC-cCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 998 9999999 566665 55699999999999988763
No 86
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.42 E-value=1.2e-13 Score=140.19 Aligned_cols=104 Identities=21% Similarity=0.477 Sum_probs=87.6
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCc--------------ccccccHHHHHHHHHhCCCceEEEEEECccchhh
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCF--------------ACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGL 920 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg--------------~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L 920 (1578)
++.++.++|++.+. +.+++++|.||++||+ +|+.+.|.|+++++.+.+. +.+++||++.++++
T Consensus 5 v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 5 IIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGT 81 (123)
T ss_dssp CEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTSCTTT
T ss_pred cEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHH
Confidence 35689999987664 3478999999999999 9999999999999998765 99999999999999
Q ss_pred HhHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 921 ARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 921 ~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+++|+|.+ +||+++|++|+....+.|..+.++|.+|+.+.+
T Consensus 82 ~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 82 APKYGIRG-IPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGGTCCB-SSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred HHHcCCCc-cCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999998 999999999998777779999999999998754
No 87
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.4e-14 Score=146.47 Aligned_cols=105 Identities=16% Similarity=0.301 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCcc------c
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVG------S 928 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~------~ 928 (1578)
+..+|.++|++.+. .+..++++|.|||+||++|+.+.|.|+++++.+++.++.++.|||++++++|++|+|. +
T Consensus 9 v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 9 IKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSC
T ss_pred EEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCC
Confidence 45689999999774 3345699999999999999999999999999998645999999999999999999998 8
Q ss_pred cCCcEEEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 929 QLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 929 ~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+||+++|++|+.+..+.|..+.+.|.+|+.+.
T Consensus 88 -~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 88 -LPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp -SSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred -CCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 99999999999887777888888887777543
No 88
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=2e-13 Score=139.35 Aligned_cols=107 Identities=18% Similarity=0.292 Sum_probs=92.5
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..++.++|...+.. .+++++|.||++||++|+.+.|.|+++++.+++. .+.++.|||+.+..++++|+|.+ +||+
T Consensus 9 v~~l~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 85 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMD--PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEG-FPTI 85 (133)
T ss_dssp SEECCTTTCCCCCTC--TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSS-SSEE
T ss_pred eEEEcCCCHHHHhcc--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCc-CCEE
Confidence 457899999998753 3789999999999999999999999999999752 39999999999999999999998 9999
Q ss_pred EEEcCCccc---cccCCCCCHHHHHHHHHhhCCC
Q psy12972 934 ALLTDGRTS---FFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 934 ~lf~~G~~~---~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|.+|... .+..|.++.++|.+|+.+.++.
T Consensus 86 ~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 86 YFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp EEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred EEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 999887643 2333668999999999998865
No 89
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.41 E-value=3.9e-14 Score=136.24 Aligned_cols=67 Identities=37% Similarity=0.749 Sum_probs=62.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|++|||+++++.++||++||+++++||||+++. ..++|++|++||++|+||.+|+.||.++..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 5799999999999999999999999999999999854 357999999999999999999999998865
No 90
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.41 E-value=1.6e-13 Score=138.00 Aligned_cols=104 Identities=18% Similarity=0.272 Sum_probs=89.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+.. .+++++|.||++||++|+.+.|.|+++++.+.+. +.++.|||+.++++|++|+|.+ +||+++
T Consensus 6 ~~l~~~~f~~~~~~--~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~ 81 (122)
T 3aps_A 6 IDLTPQTFNEKVLQ--GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK-VRAGKVDCQAYPQTCQKAGIKA-YPSVKL 81 (122)
T ss_dssp EECCHHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred hcCCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-eEEEEEeCcCCHHHHHHcCCCc-cceEEE
Confidence 46888999765653 3789999999999999999999999999999874 9999999999999999999998 999999
Q ss_pred EcCCccccccCCC----CCHHHHHHHHHhhCC
Q psy12972 936 LTDGRTSFFKEPS----FSVQKMVEFFRLKLP 963 (1578)
Q Consensus 936 f~~G~~~~y~~G~----~s~~~L~~fi~~~lp 963 (1578)
|.+|.....+.|. ++.++|.+|+.+.+.
T Consensus 82 ~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 9776655444454 799999999987763
No 91
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.40 E-value=2.5e-13 Score=134.39 Aligned_cols=98 Identities=16% Similarity=0.386 Sum_probs=87.3
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
..+.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|
T Consensus 11 ~~~~~~f~~~~---~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~ 84 (109)
T 3f3q_A 11 FKTASEFDSAI---AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDELGDVAQKNEVSA-MPTLLLF 84 (109)
T ss_dssp CCSHHHHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSEEEEE
T ss_pred CCCHHHHHHHH---hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHcCCCc-cCEEEEE
Confidence 35677888866 4579999999999999999999999999999865 8999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
++|+.+..+.|. +.++|.+++.+.
T Consensus 85 ~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred ECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 999988777786 779999999865
No 92
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.40 E-value=4.9e-13 Score=159.37 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..-... .+ .-.|.+|+
T Consensus 30 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~~E~ 74 (350)
T 4b9d_A 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS--KE---------------------------------REESRREV 74 (350)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEECTTSCH--HH---------------------------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH--HH---------------------------------HHHHHHHH
Confidence 67999999999999964 89999999986432110 00 01356788
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-|.+=.++.+ ...-+|||||++|.+|.++...... .++...+...+.+++ ++.+|..|++||
T Consensus 75 ~il~~l~----HpnIV~~~~~~~~-~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHR 149 (350)
T 4b9d_A 75 AVLANMK----HPNIVQYRESFEE-NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149 (350)
T ss_dssp HHHHHCC----CTTBCCEEEEEEE-TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEET
T ss_pred HHHHHCC----CCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 8877763 3334555455432 3445799999999999887543222 245556655565655 888999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||+|||+. .++++|||...
T Consensus 150 DlKp~NILl~~~g~vKl~DFGla~ 173 (350)
T 4b9d_A 150 DIKSQNIFLTKDGTVQLGDFGIAR 173 (350)
T ss_dssp TCCGGGEEECTTCCEEECSTTEES
T ss_pred cCCHHHEEECCCCCEEEcccccce
Confidence 9999999964 59999999764
No 93
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.40 E-value=1.9e-13 Score=139.01 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=90.8
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..++. ++|++.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.|+.||++.++++|++|+|.+ +||+
T Consensus 21 v~~l~~~~~f~~~~---~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 94 (125)
T 1r26_A 21 VVDVYSVEQFRNIM---SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADNNSEIVSKCRVLQ-LPTF 94 (125)
T ss_dssp CEEECCHHHHHHHH---HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEE
T ss_pred eEECCCHHHHHHHH---ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCCCHHHHHHcCCCc-ccEE
Confidence 456888 9999877 457899999999999999999999999999984 38999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
++|++|+....+.| .+.++|.+++.+.++
T Consensus 95 ~i~~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 95 IIARSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEEeCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 99999998776768 688999999987653
No 94
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.40 E-value=3.6e-13 Score=160.21 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=103.7
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|..+ +.||.|++|.||+|+.+ +|+.||||+....-... .
T Consensus 72 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-------------------------------~--- 115 (346)
T 4fih_A 72 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-------------------------------R--- 115 (346)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS-------------------------------G---
T ss_pred hhHhcEEe--EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH-------------------------------H---
Confidence 45667766 56999999999999975 79999999985321100 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
-.+.+|++.+.++ .|..-|.+=.++.+ ...-+|||||++|..|.++ +...+++...+...+.+++ ++.
T Consensus 116 ---~~~~~Ei~il~~l----~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~--l~~~~l~e~~~~~~~~qi~~aL~y 185 (346)
T 4fih_A 116 ---ELLFNEVVIMRDY----QHENVVEMYNSYLV-GDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSV 185 (346)
T ss_dssp ---GGGHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEECCCTTEEHHHH--HHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCCCCCcEEEEEEE-CCEEEEEEeCCCCCcHHHH--HHcCCCCHHHHHHHHHHHHHHHHH
Confidence 0135666666655 33333444444432 3445799999999999887 4456788888877777766 889
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|||+||.|||+. .++++|||....
T Consensus 186 lH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 219 (346)
T 4fih_A 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 219 (346)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred HHHCCcccccCCHHHEEECCCCCEEEecCcCcee
Confidence 9999999999999999964 699999997643
No 95
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.40 E-value=2.9e-13 Score=132.92 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=85.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 8 ~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 83 (107)
T 1gh2_A 8 SDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQCQGTAATNNISA-TPTFQFFRN 83 (107)
T ss_dssp SGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSEEEEEET
T ss_pred CHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHhcCCCc-ccEEEEEEC
Confidence 56888887643 347899999999999999999999999999984 38999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.| .+.++|.+|+.+.+
T Consensus 84 G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 84 KVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp TEEEEEEES-SCHHHHHHHHHHHH
T ss_pred CeEEEEEeC-CCHHHHHHHHHHhc
Confidence 988776767 45566999998754
No 96
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.40 E-value=3.4e-13 Score=150.97 Aligned_cols=105 Identities=21% Similarity=0.466 Sum_probs=96.3
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+.+ .+++++|.||++||++|+.+.|.|+++++.+++. +.++.|||+.++++|++|+|.+ +||+++
T Consensus 15 ~~lt~~~f~~~v~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~ 90 (222)
T 3dxb_A 15 IHLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGIRG-IPTLLL 90 (222)
T ss_dssp EECCTTTHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTCCS-BSEEEE
T ss_pred eeCCHHHHHHHHHh--cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCCCc-CCEEEE
Confidence 46899999987654 4789999999999999999999999999999876 9999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|++|+....+.|..+.++|.+|+.+.++.
T Consensus 91 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 91 FKNGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred EECCeEEEEeccccChHHHHHHHHhhccc
Confidence 99999887777999999999999988854
No 97
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.40 E-value=6.6e-13 Score=152.10 Aligned_cols=155 Identities=23% Similarity=0.242 Sum_probs=95.8
Q ss_pred cccccccceEEEEEEe-cCCCE--EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVE--VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~--VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
.+||+|++|+||+|+. .+|+. ||||+.+++.... .. ...++.....+.++. ....-..+..+.+
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~-~~----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 119 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEF-DK----------MDEYLYGDERFDMRR--ISPKEKVFIWTEK 119 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC------------------GGGTTTCTTSCC------CHHHHHHHHHH
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccch-hh----------HHHhhcccchhhhhc--cChHHHHHHHHHH
Confidence 6899999999999997 68999 9999988764211 00 001111111111110 0111233456789
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccC--CCcCCchhhHhhc--CCCHHHHHHHHHHHHHHHHH-HcC
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFID--GVKISDKEGLLEK--GFSLADVDRKLFTAFAEQIF-QTG 560 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~--G~~l~d~~~l~~~--~~~~~~v~~~l~~~~l~~i~-~~G 560 (1578)
|++++.++.+. .+.+|.++. ....+|||||+. |.....+...... ......++..++++ +..+| ..|
T Consensus 120 E~~~l~~l~~~-----~i~~p~~~~--~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~-l~~lH~~~g 191 (258)
T 1zth_A 120 EFRNLERAKEA-----GVSVPQPYT--YMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVEN-VKRLYQEAE 191 (258)
T ss_dssp HHHHHHHHHHT-----TCCCCCEEE--EETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHH-HHHHHHTSC
T ss_pred HHHHHHHHHhC-----CCCCCeEEE--cCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHH-HHHHHHHCC
Confidence 99999999753 467888875 357799999993 4333333221111 12344555555554 56789 999
Q ss_pred ccccCCCCCCCCCC-eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT-WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~-~v~liDfG~~ 584 (1578)
++|||+||+|||+. .++++|||..
T Consensus 192 ivHrDlkp~NILl~~~~~liDFG~a 216 (258)
T 1zth_A 192 LVHADLSEYNIMYIDKVYFIDMGQA 216 (258)
T ss_dssp EECSSCSTTSEEESSSEEECCCTTC
T ss_pred EEeCCCCHHHEEEcCcEEEEECccc
Confidence 99999999999965 3566666644
No 98
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.39 E-value=3.7e-13 Score=131.18 Aligned_cols=102 Identities=14% Similarity=0.307 Sum_probs=89.5
Q ss_pred Eeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
.++++ ++|.+.+.+ ..+++++|.||++||++|+.+.|.++++++.+++. +.++.||++.+++++++|+|.+ +||++
T Consensus 3 ~~l~~~~~~~~~l~~-~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 79 (106)
T 1xwb_A 3 YQVKDKADLDGQLTK-ASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN-VVVLKVDVDECEDIAMEYNISS-MPTFV 79 (106)
T ss_dssp EECCSHHHHHHHHHH-HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred eecCCHHHHHHHHHh-cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC-eEEEEEeccchHHHHHHcCCCc-ccEEE
Confidence 45677 888887743 25789999999999999999999999999998653 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.| .+.++|.+++.+.
T Consensus 80 ~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 80 FLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred EEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 9999998777778 7889999999765
No 99
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.39 E-value=3.3e-13 Score=137.35 Aligned_cols=88 Identities=24% Similarity=0.424 Sum_probs=81.9
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFS 950 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s 950 (1578)
..+++++|.||++||++|+++.|.++++++.+++. +.++.||++.++++|++|+|.+ +||+++|++|+....+.|..+
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~~G~~~~~~~G~~~ 117 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR-IYLLKVDLDKNESLARKFSVKS-LPTIILLKNKTMLARKDHFVS 117 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-EEEEEEEGGGCHHHHHHTTCCS-SSEEEEEETTEEEEEESSCCC
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCCCC-cCEEEEEECCEEEEEecCCCC
Confidence 34789999999999999999999999999999754 9999999999999999999998 999999999998888889999
Q ss_pred HHHHHHHHHh
Q psy12972 951 VQKMVEFFRL 960 (1578)
Q Consensus 951 ~~~L~~fi~~ 960 (1578)
.++|.+|+++
T Consensus 118 ~~~l~~~l~~ 127 (128)
T 3ul3_B 118 SNDLIALIKK 127 (128)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 100
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.39 E-value=3.3e-13 Score=157.17 Aligned_cols=150 Identities=18% Similarity=0.106 Sum_probs=102.9
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|...+.-|-.|+. -||.|++|.||+|+.+ +|+.||||+........ .
T Consensus 19 ~~~~~~gr~~~~~~-~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~--~---------------------------- 67 (290)
T 3fpq_A 19 VGMSNDGRFLKFDI-EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--S---------------------------- 67 (290)
T ss_dssp EEECTTSSEEEEEE-EEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--H----------------------------
T ss_pred cCcCCCCceEEeee-EEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH--H----------------------------
Confidence 44455555555653 5999999999999965 79999999986432110 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCC-c--eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHH
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSS-T--RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFT 550 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-~--~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~ 550 (1578)
..-.|.+|++.+.++. |..-|.+=.++.+... + -+|||||++|.+|.++.. ....++...+...+.+
T Consensus 68 -----~~~~~~~E~~il~~l~----HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~-~~~~l~~~~~~~~~~q 137 (290)
T 3fpq_A 68 -----ERQRFKEEAEMLKGLQ----HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQ 137 (290)
T ss_dssp -----HHHHHHHHHHHHHTCC----CTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhCC----CCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHH
Confidence 0013567887776653 3333444444322111 1 379999999999998753 3345777666666666
Q ss_pred HH--HHHHHHcC--ccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 551 AF--AEQIFQTG--FVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 551 ~~--l~~i~~~G--~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
++ +..+|..| ++|||+||.|||+. .++++|||.+.
T Consensus 138 i~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp HHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred HHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 55 78899999 99999999999963 59999999863
No 101
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.39 E-value=4.6e-13 Score=158.15 Aligned_cols=157 Identities=17% Similarity=0.073 Sum_probs=112.5
Q ss_pred hhhHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCC
Q psy12972 384 KGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYP 462 (1578)
Q Consensus 384 ~~~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~ 462 (1578)
..++++.++..++.+....+-.+. ++||+|++|+||+|+.+ +|+.||||+.++......
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~------------------- 86 (321)
T 2c30_A 27 HEQFKAALRMVVDQGDPRLLLDSY-VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR------------------- 86 (321)
T ss_dssp HHHHHHHHHTTSCSSCHHHHEEEE-EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSH-------------------
T ss_pred HHHHHHHHhhccCCCCchhhhhcc-EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHH-------------------
Confidence 445666677777765544443333 48999999999999976 899999999876532210
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHH
Q psy12972 463 KFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLA 542 (1578)
Q Consensus 463 ~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~ 542 (1578)
-.+.+|++.+.+++ ++.+.-+.-+.......+|||||++|.+|.++ +...+++..
T Consensus 87 ------------------~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~l~~~ 141 (321)
T 2c30_A 87 ------------------ELLFNEVVIMRDYQ-----HFNVVEMYKSYLVGEELWVLMEFLQGGALTDI--VSQVRLNEE 141 (321)
T ss_dssp ------------------HHHHHHHHHHTTCC-----CTTBCCEEEEEEETTEEEEEECCCCSCBHHHH--HTTCCCCHH
T ss_pred ------------------HHHHHHHHHHHhCC-----CCCcceEEEEEEECCEEEEEEecCCCCCHHHH--HHhcCCCHH
Confidence 01355666665542 33333222233345667899999999999887 345678888
Q ss_pred HHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 543 DVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 543 ~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+...+.+++ +..+|..|++|+|+||+|||+. .++++|||...
T Consensus 142 ~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~ 189 (321)
T 2c30_A 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA 189 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeee
Confidence 8777777766 8899999999999999999965 59999999754
No 102
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.39 E-value=3.3e-13 Score=131.46 Aligned_cols=99 Identities=20% Similarity=0.325 Sum_probs=87.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+. ...+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|++
T Consensus 7 ~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~~~~ 82 (105)
T 3m9j_A 7 SKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDDCQDVASESEVKS-MPTFQFFKK 82 (105)
T ss_dssp SHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTTCHHHHHHTTCCB-SSEEEEEET
T ss_pred CHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhhhHHHHHHcCCCc-CcEEEEEEC
Confidence 5567777653 22578999999999999999999999999999875 8999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|. +.++|.+++.+.+
T Consensus 83 g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 83 GQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHC
T ss_pred CeEEEEEeCC-CHHHHHHHHHHhC
Confidence 9988777787 9999999998753
No 103
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.38 E-value=6.9e-13 Score=161.67 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=104.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|..+ +.||.|++|.||+|+.+ +|+.||||+....-.. . .
T Consensus 149 p~~~y~~~--~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----------------------~--------~--- 192 (423)
T 4fie_A 149 PRSYLDNF--IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----------------------R--------R--- 192 (423)
T ss_dssp GGGTEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-----------------------S--------G---
T ss_pred hhHhcEee--eEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-----------------------H--------H---
Confidence 45566666 56999999999999965 7999999998532100 0 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
-.+.+|++.+.++ .|...|.+=.++.+ ...-+|||||++|..|.++ +...+++...+...+.+++ ++.
T Consensus 193 ---~~~~~Ei~il~~l----~HpnIV~l~~~~~~-~~~~~iVmEy~~gG~L~~~--i~~~~l~e~~~~~~~~qil~aL~y 262 (423)
T 4fie_A 193 ---ELLFNEVVIMRDY----QHENVVEMYNSYLV-GDELWVVMEFLEGGALTDI--VTHTRMNEEQIAAVCLAVLQALSV 262 (423)
T ss_dssp ---GGHHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEEECCTTEEHHHH--HHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCCCCCceEEEEEE-CCEEEEEEeCCCCCcHHHH--HhccCCCHHHHHHHHHHHHHHHHH
Confidence 0135677666655 33334444444432 3445799999999999887 4566788888877777766 889
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|..|++|||+||.|||+. .++++|||....
T Consensus 263 lH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~ 296 (423)
T 4fie_A 263 LHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ 296 (423)
T ss_dssp HHHTTEECCCCSTTTEEECTTCCEEECCCTTCEE
T ss_pred HHHCCeecccCCHHHEEEcCCCCEEEecCccceE
Confidence 9999999999999999964 699999997643
No 104
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.38 E-value=4.1e-13 Score=134.15 Aligned_cols=102 Identities=18% Similarity=0.355 Sum_probs=89.3
Q ss_pred EEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
++++++ ++|.+.+.+ ..+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.+++++++|+|.+ +||+
T Consensus 15 v~~l~~~~~~~~~l~~-~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 89 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQ-HKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDKLEETARKYNISA-MPTF 89 (117)
T ss_dssp EEECCSTTHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTTSHHHHHHTTCCS-SSEE
T ss_pred eEEeCCHHHHHHHHHh-CCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCccHHHHHHcCCCc-cceE
Confidence 556777 889887643 25789999999999999999999999999987 48999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.| .+.++|.+++.+.+
T Consensus 90 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 90 IAIKNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp EEEETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred EEEeCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 99999998777768 68899999997653
No 105
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.38 E-value=3.5e-13 Score=133.00 Aligned_cols=104 Identities=18% Similarity=0.356 Sum_probs=89.8
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.||++.+++++++|+|.+ +||+
T Consensus 5 ~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~-~Pt~ 82 (112)
T 1ep7_A 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDAVAAVAEAAGITA-MPTF 82 (112)
T ss_dssp EEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTTTHHHHHHHTCCB-SSEE
T ss_pred EEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCchHHHHHHcCCCc-ccEE
Confidence 345 567888877431 1268999999999999999999999999999976 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+....+.|. +.++|.+|+.+.+
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 999999987666687 8999999998765
No 106
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.38 E-value=6.7e-13 Score=131.18 Aligned_cols=102 Identities=18% Similarity=0.317 Sum_probs=89.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl 933 (1578)
++.++.++|.+.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ .+.+++++|+|.+ +||+
T Consensus 7 v~~l~~~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~--v~~~~vd~~~~~~~~~~~~~v~~-~Pt~ 82 (111)
T 2pu9_C 7 VTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRV-VPTF 82 (111)
T ss_dssp EEEECTTTHHHHHTT-CTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSB-SSEE
T ss_pred cEEechHHHHHHHHh-cCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC--eEEEEEecCcchHHHHHHcCCCe-eeEE
Confidence 457899999997743 2478999999999999999999999999999874 899999998 7899999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+++++|+....+.|. +.++|.+++.+.
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 83 KILKENSVVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp EEESSSSEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCC-CHHHHHHHHHHh
Confidence 999999987666676 488999999764
No 107
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.38 E-value=1.1e-13 Score=137.41 Aligned_cols=70 Identities=30% Similarity=0.501 Sum_probs=65.3
Q ss_pred ccCCCcccccccccC-CHHHHHHHhhhhhhhcCCCCCCC----hhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 635 VSLDPYETLGVPRTA-SLQEIRKNYKRLVVEWHPDKNND----PTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~a-s~~eIk~ayr~l~~~~HPDk~~~----~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
...|+|++|||++++ |.++||+|||++++++|||+++. +.+.++|++|++||++|+||.+|+.||.++..
T Consensus 13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 367999999999999 99999999999999999999976 67889999999999999999999999998754
No 108
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.38 E-value=3.8e-13 Score=133.26 Aligned_cols=101 Identities=15% Similarity=0.300 Sum_probs=88.1
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEE
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf 936 (1578)
.++.++| +.+ ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|
T Consensus 7 ~~~~~~f-~~~---~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~ 79 (110)
T 2l6c_A 7 ITTEAGM-AHF---EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEARPELMKELGFER-VPTLVFI 79 (110)
T ss_dssp CGGGCSH-HHH---TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGGCHHHHHHTTCCS-SCEEEEE
T ss_pred cCCHHHH-HHH---HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcCCHHHHHHcCCcc-cCEEEEE
Confidence 4678888 555 346899999999999999999999999999875 38999999999999999999998 9999999
Q ss_pred cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 937 TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 937 ~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|+.+..+.|..+.++|.+++.+..++
T Consensus 80 ~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred ECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 9999887777989999999999887654
No 109
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.38 E-value=4.4e-13 Score=141.09 Aligned_cols=120 Identities=12% Similarity=0.192 Sum_probs=91.9
Q ss_pred Eeec-cccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTT-HWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt-~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.++ .++|.+.+.. ..+++++|.||++||++|+.+.|.|+++++.+. ++.|+.||++.++++|++|+|.+ +||++
T Consensus 15 ~~l~~~~~~~~~~~~-~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 90 (153)
T 2wz9_A 15 EEVGSAGQFEELLRL-KAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEGVPEVSEKYEISS-VPTFL 90 (153)
T ss_dssp EEECSHHHHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-SSEEE
T ss_pred EEcCCHHHHHHHHHh-cCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCCCHHHHHHcCCCC-CCEEE
Confidence 3455 5788876632 237899999999999999999999999999974 38999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCCCc------cccccccccHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK------LIVPLSATNVDAFLD 980 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~------vv~~it~~~~~~fl~ 980 (1578)
+|.+|+.+.++.| .+.++|.+|+.+.++.. .+..+++++++++..
T Consensus 91 ~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~~~~~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 91 FFKNSQKIDRLDG-AHAPELTKKVQRHASSGSFLPSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp EEETTEEEEEEES-SCHHHHHHHHHHHSCTTSSCSCCCCCCC----------
T ss_pred EEECCEEEEEEeC-CCHHHHHHHHHHHhccccCCCccccccCCCCChhhHHH
Confidence 9999988777767 57889999999887532 344556666666554
No 110
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.37 E-value=6.2e-13 Score=137.41 Aligned_cols=104 Identities=24% Similarity=0.388 Sum_probs=81.7
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+++++.++|.+.+... ++ ++|.||++||++|+.+.|.|+++++.+.+. +.|+.||++.+.+++++|+|.+ +||++
T Consensus 35 v~~l~~~~~~~~~~~~--~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~-~Pt~~ 109 (140)
T 1v98_A 35 VVEADEKGFAQEVAGA--PL-TLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDEHPGLAARYGVRS-VPTLV 109 (140)
T ss_dssp --------------CC--CE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred cccCCHHHHHHHHHcC--CC-EEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCCCHHHHHHCCCCc-cCEEE
Confidence 4578999999887533 44 999999999999999999999999999865 9999999999999999999997 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|..+.++|.+|+.+.+.
T Consensus 110 ~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 110 LFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred EEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 99999987777799999999999987653
No 111
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.37 E-value=3.5e-13 Score=140.35 Aligned_cols=105 Identities=13% Similarity=0.140 Sum_probs=78.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCC--CcccccccHHHHHHHHHhCCCceE--EEEEECccchhhHhHcCccccC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVG--FFTVHVHNEQGLARRLGVGSQL 930 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l~~~~v~--~a~VDc~~~~~L~~k~gV~~~~ 930 (1578)
+..+|.++|++.+. .++.++|.|+++| |++|+.+.|.|+++++++ +. +. |++||+++++++|++|+|.+ +
T Consensus 19 ~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~-v~~~~~~Vd~d~~~~la~~~~V~~-i 92 (142)
T 2es7_A 19 WQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ-FDWQVAVADLEQSEAIGDRFNVRR-F 92 (142)
T ss_dssp CEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT-SCCEEEEECHHHHHHHHHTTTCCS-S
T ss_pred CcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc-cceeEEEEECCCCHHHHHhcCCCc-C
Confidence 34688899999873 3556899999887 999999999999999998 54 88 99999999999999999998 9
Q ss_pred CcEEEEcCCccccccCCCCCHHHHHHHHHhhCCCc
Q psy12972 931 PQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPYK 965 (1578)
Q Consensus 931 PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~~ 965 (1578)
||+++|++|+....+.|.++.++|.+|+.+.+..+
T Consensus 93 PT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 93 PATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp SEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred CeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 99999999998877779999999999999887553
No 112
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.37 E-value=4.8e-13 Score=134.82 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=82.8
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.++|.++|.+.+.+.+.+++++|.||||||++|+.+.|.++++|+++.+ +.|++||+++. +++|+|.+ .||+++
T Consensus 6 ~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~---~~~~~v~~-~PT~~~ 79 (118)
T 3evi_A 6 REISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSC---IQHYHDNC-LPTIFV 79 (118)
T ss_dssp EECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGT---STTCCGGG-CSEEEE
T ss_pred EEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHh---HHHCCCCC-CCEEEE
Confidence 4678999999886554455999999999999999999999999999863 89999999875 68999998 999999
Q ss_pred EcCCccccccCCC-------CCHHHHHHHHHh
Q psy12972 936 LTDGRTSFFKEPS-------FSVQKMVEFFRL 960 (1578)
Q Consensus 936 f~~G~~~~y~~G~-------~s~~~L~~fi~~ 960 (1578)
|++|+.+....|. .+.++|..++.+
T Consensus 80 fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 80 YKNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp EETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred EECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 9999977555553 456677777754
No 113
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.37 E-value=5.5e-13 Score=134.00 Aligned_cols=104 Identities=15% Similarity=0.292 Sum_probs=91.6
Q ss_pred Eeeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
..++.++|++.+... +.+++++|.||++||++|+.+.|.|+++++.+.+ +.++.||++.+++++++|+|.+ +||++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~v~~-~Pt~~ 92 (122)
T 2vlu_A 16 SVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDELKPIAEQFSVEA-MPTFL 92 (122)
T ss_dssp EECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-SSEEE
T ss_pred eccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCCCHHHHHHcCCCc-ccEEE
Confidence 357888999877541 2478999999999999999999999999999875 8999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|++|+....+.|.. .++|.+|+.+.++
T Consensus 93 ~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 93 FMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 999999877677877 8999999987764
No 114
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.36 E-value=4.7e-13 Score=132.71 Aligned_cols=100 Identities=14% Similarity=0.343 Sum_probs=89.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|++.+ ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++
T Consensus 12 ~~~~~~~f~~~~---~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~--v~~~~vd~~~~~~~~~~~~v~~-~Pt~~~ 85 (112)
T 1syr_A 12 IVTSQAEFDSII---SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK--MVFIKVDVDEVSEVTEKENITS-MPTFKV 85 (112)
T ss_dssp EECSHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTTHHHHHHTTCCS-SSEEEE
T ss_pred EECCHHHHHHHH---ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CEEEEEECCCCHHHHHHcCCCc-ccEEEE
Confidence 357889999977 3478999999999999999999999999999863 8999999999999999999998 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|++|+....+.|. +.++|.+|+.+.+
T Consensus 86 ~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 86 YKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred EECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 9999887777787 9999999998754
No 115
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.36 E-value=1.1e-12 Score=153.42 Aligned_cols=137 Identities=15% Similarity=0.095 Sum_probs=97.2
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|+||+|+++ +|+.||||+.+..-.. ..-+
T Consensus 19 ~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------------------~~~~ 61 (299)
T 4asz_A 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN-------------------------------------ARKD 61 (299)
T ss_dssp EEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHH-------------------------------------HHHH
T ss_pred eEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChH-------------------------------------HHHH
Confidence 57999999999999864 5889999998643111 0124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh------------hcCCCHHHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL------------EKGFSLADVDRKLFT 550 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~------------~~~~~~~~v~~~l~~ 550 (1578)
|.+|++.+.+++ |..-|.+=.++.+ ....+|||||++|.+|.++..-. ...++...+...+.+
T Consensus 62 f~~E~~il~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 62 FHREAELLTNLQ----HEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHTTCC----CTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCccEEEEEee-CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 677887776653 4444555444432 34568999999999999874321 124677777776666
Q ss_pred HH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 551 AF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 551 ~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+. +..+|..|++|||++|.|||++ .+++.|||....+
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 178 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV 178 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceec
Confidence 66 7889999999999999999976 5999999987543
No 116
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.36 E-value=1.2e-12 Score=153.70 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|++++ .||||+.+..-... + ..-.|.+|++
T Consensus 42 ~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~-----------------------------~------~~~~f~~E~~ 84 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTP-----------------------------E------QFQAFRNEVA 84 (307)
T ss_dssp EECCCCSSSEEEEEESSS--EEEEEECCCSSCCH-----------------------------H------HHHHHHHHHH
T ss_pred eEEeeCCCcEEEEEEECC--cEEEEEEEecCCCH-----------------------------H------HHHHHHHHHH
Confidence 569999999999998753 69999986321100 0 0114677887
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ |..-|.+=.+.. ...-+|||||++|.+|.+........++...+...+.++. +..+|..|++|||+
T Consensus 85 il~~l~----HpNIV~l~g~~~--~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDl 158 (307)
T 3omv_A 85 VLRKTR----HVNILLFMGYMT--KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158 (307)
T ss_dssp HHTTCC----CTTBCCEEEEEC--SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCC
T ss_pred HHHhCC----CCCEeeEEEEEE--CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCcc
Confidence 776653 333343333321 2345899999999999987543445678877777777766 88899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.|||+. .+++.|||.+.
T Consensus 159 Kp~NILl~~~~~~Ki~DFGla~ 180 (307)
T 3omv_A 159 KSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp CSSSEEEETTEEEEECCCSSCB
T ss_pred CHHHEEECCCCcEEEeeccCce
Confidence 99999975 59999999864
No 117
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.36 E-value=5.3e-13 Score=140.15 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=89.6
Q ss_pred eccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 858 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 858 Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
.+.++|++.+.. +.+++++|.|||+||++|+.+.|.++++++.+.+. +.++.||++++++++++|+|.+ +||+++|+
T Consensus 9 ~~~~~~~~~i~~-~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~~~~l~~~~~v~~-~Pt~~~~~ 85 (149)
T 3gix_A 9 TSKKEVDQAIKS-TAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQTAVYTQYFDISY-IPSTVFFF 85 (149)
T ss_dssp CSHHHHHHHHHH-CCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTTCCHHHHHTTCCS-SSEEEEEE
T ss_pred CCHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCcCHHHHHHcCCCc-cCeEEEEE
Confidence 466788887752 23789999999999999999999999999999876 9999999999999999999998 99999999
Q ss_pred CCccc---------cccCC-CCCHHHHHHHHHhhC
Q psy12972 938 DGRTS---------FFKEP-SFSVQKMVEFFRLKL 962 (1578)
Q Consensus 938 ~G~~~---------~y~~G-~~s~~~L~~fi~~~l 962 (1578)
+|+.+ ....| ..+.++|.+++...+
T Consensus 86 ~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 86 NGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp TTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 99987 66668 889999999997654
No 118
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.35 E-value=7.9e-13 Score=128.39 Aligned_cols=100 Identities=20% Similarity=0.332 Sum_probs=87.5
Q ss_pred eecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 857 STTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 857 ~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
.+++ ++|++.+.+ ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++
T Consensus 3 ~i~~~~~~~~~l~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt~~~ 78 (104)
T 2vim_A 3 VLATAADLEKLINE-NKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQNEEAAAKYSVTA-MPTFVF 78 (104)
T ss_dssp ECCSHHHHHHHHHT-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTCHHHHHHTTCCS-SSEEEE
T ss_pred ecCCHHHHHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccCCHHHHHHcCCcc-ccEEEE
Confidence 4555 778876643 257899999999999999999999999999986 48999999999999999999997 999999
Q ss_pred EcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|++|+....+.| .+.++|.+|+.+.
T Consensus 79 ~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 79 IKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred EeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 999998777768 6889999999765
No 119
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.35 E-value=6.1e-13 Score=157.79 Aligned_cols=129 Identities=16% Similarity=0.118 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+.... ..+|+
T Consensus 64 ~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------------------------------------------~~~E~ 101 (336)
T 4g3f_A 64 PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------------------------------------------RVEEL 101 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------------------------------------------CTHHH
T ss_pred cEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------------------------------------------HHHHH
Confidence 45999999999999965 799999999863210 01344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+=.++.+ ...-+|||||++|.+|.++.. ....++...+...+.+++ ++.+|..|++|||
T Consensus 102 ~il~~l----~HpnIV~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRD 175 (336)
T 4g3f_A 102 VACAGL----SSPRIVPLYGAVRE-GPWVNIFMELLEGGSLGQLIK-QMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175 (336)
T ss_dssp HTTTTC----CCTTBCCEEEEEEE-TTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred HHHHhC----CCCCCCcEEEEEEE-CCEEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 444333 33333444444422 234579999999999998753 234578777777777766 8899999999999
Q ss_pred CCCCCCCCC----eeEEecCCchh
Q psy12972 566 PHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~----~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 176 lKp~NILl~~~g~~vKl~DFGla~ 199 (336)
T 4g3f_A 176 VKADNVLLSSDGSRAALCDFGHAL 199 (336)
T ss_dssp CCGGGEEECTTSCCEEECCCTTCE
T ss_pred cCHHHEEEeCCCCEEEEeeCCCCe
Confidence 999999963 49999999764
No 120
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.34 E-value=2.1e-12 Score=151.39 Aligned_cols=138 Identities=14% Similarity=0.049 Sum_probs=97.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+........ .+ . .-.+.+|+
T Consensus 38 ~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~--~~------------------~--------------~~~~~~E~ 83 (311)
T 4aw0_A 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIK--EN------------------K--------------VPYVTRER 83 (311)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C--------------HHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC--HH------------------H--------------HHHHHHHH
Confidence 67999999999999964 89999999986431100 00 0 01245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+=.++.+ ...-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 84 ~il~~l----~HpnIv~l~~~~~~-~~~~yivmEy~~gG~L~~~i~-~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD 157 (311)
T 4aw0_A 84 DVMSRL----DHPFFVKLYFTFQD-DEKLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRD 157 (311)
T ss_dssp HHHTTC----CCTTBCCEEEEEEC-SSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhC----CCCCCCeEEEEEEe-CCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 666554 33333444444432 234579999999999988743 334677777766666665 8899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||....
T Consensus 158 lKPeNILl~~~g~vKl~DFGla~~ 181 (311)
T 4aw0_A 158 LKPENILLNEDMHIQITDFGTAKV 181 (311)
T ss_dssp CSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCHHHeEEcCCCCEEEEEcCCcee
Confidence 999999964 599999998643
No 121
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.34 E-value=1.6e-12 Score=152.84 Aligned_cols=138 Identities=13% Similarity=0.082 Sum_probs=98.5
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|++. +|+.||||+.+....... .-+
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~------------------------------------~~~ 75 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL------------------------------------REE 75 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-C------------------------------------HHH
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHH------------------------------------HHH
Confidence 45999999999999973 578999999865432110 113
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDRK 547 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~~ 547 (1578)
|.+|++.+.+++ |..-|.+=.+..+ ...-.|||||++|++|.++.... ...++..++...
T Consensus 76 f~~E~~il~~l~----HpNIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 150 (308)
T 4gt4_A 76 FRHEAMLRARLQ----HPNVVCLLGVVTK-DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150 (308)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEECS-SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCCcceEEEE-CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHH
Confidence 677888777763 3333444444422 24568999999999999875321 124677777777
Q ss_pred HHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 548 LFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 548 l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+.++. ++.+|..|++|||++|.|||+. .+++.|||....+
T Consensus 151 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~ 195 (308)
T 4gt4_A 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195 (308)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGG
T ss_pred HHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceec
Confidence 76666 8889999999999999999975 5999999987544
No 122
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.34 E-value=1.5e-12 Score=131.36 Aligned_cols=103 Identities=18% Similarity=0.333 Sum_probs=89.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl 933 (1578)
+..++.++|.+.+.. ..+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ .+++++++|+|.+ +||+
T Consensus 20 v~~l~~~~~~~~~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~~~~~~~~~~~v~~-~Pt~ 95 (124)
T 1faa_A 20 VTEVNKDTFWPIVKA-AGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD--VIFLKLDCNQENKTLAKELGIRV-VPTF 95 (124)
T ss_dssp EEEECTTTHHHHHHH-TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEECSSTTHHHHHHHCCSS-SSEE
T ss_pred eEEecchhHHHHHHh-cCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC--CEEEEEecCcchHHHHHHcCCCe-eeEE
Confidence 457889999987743 2478999999999999999999999999999874 899999998 6889999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+++++|+....+.|.. .++|.+++.+..
T Consensus 96 ~~~~~G~~~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 96 KILKENSVVGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHT
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHhh
Confidence 9999999876666765 889999997653
No 123
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.33 E-value=2e-12 Score=130.90 Aligned_cols=92 Identities=13% Similarity=0.250 Sum_probs=83.7
Q ss_pred CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE--CccchhhHhHcCccccCCcEEEEc-CCccccccCC
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH--VHNEQGLARRLGVGSQLPQIALLT-DGRTSFFKEP 947 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD--c~~~~~L~~k~gV~~~~PTl~lf~-~G~~~~y~~G 947 (1578)
..+++++|.||++||++|+.+.|.++++++.+++ ++.++.|| ++.+.+++++|+|.+ +||+++|. +|+....+.|
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~v~~~~d~~~~~~~~~~v~~-~Pt~~~~~~~G~~~~~~~G 101 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREG-KFNIYYARLEEEKNIDLAYKYDANI-VPTTVFLDKEGNKFYVHQG 101 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSS-SCEEEEEETTSSHHHHHHHHTTCCS-SSEEEEECTTCCEEEEEES
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcC-CeEEEEEeCCCCchHHHHHHcCCcc-eeEEEEECCCCCEEEEecC
Confidence 4578999999999999999999999999999974 49999999 999999999999998 99999998 8988776779
Q ss_pred CCCHHHHHHHHHhhCCC
Q psy12972 948 SFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 948 ~~s~~~L~~fi~~~lp~ 964 (1578)
..+.++|.+++.+.+.+
T Consensus 102 ~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 102 LMRKNNIETILNSLGVK 118 (126)
T ss_dssp CCCHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHHhcc
Confidence 99999999999988754
No 124
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2.8e-13 Score=129.68 Aligned_cols=62 Identities=32% Similarity=0.486 Sum_probs=59.0
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHh
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQ 697 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~ 697 (1578)
..|+|++|||+++++.++||+|||+++++||||+++++.+.++|++|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 58999999999999999999999999999999999988999999999999999999987763
No 125
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.33 E-value=5.1e-13 Score=134.68 Aligned_cols=99 Identities=20% Similarity=0.410 Sum_probs=88.0
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+ +.+++++|.||++||++|+.+.|.++++++.+.+.++.++.||++.+++++++|+|.+ +||+++|++
T Consensus 22 ~~~~f~~~l---~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~-~Pt~~~~~~ 97 (121)
T 2j23_A 22 SYDQFKQVT---GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRA-MPTFVFFKN 97 (121)
T ss_dssp SHHHHHHHH---SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCS-SSEEEEEET
T ss_pred CHHHHHHHH---cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCc-ccEEEEEEC
Confidence 447888876 4578999999999999999999999999998875458999999999999999999998 999999999
Q ss_pred CccccccCCCCCHHHHHHHHHhhC
Q psy12972 939 GRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|+....+.|. +.++|.+|+.+.+
T Consensus 98 G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 98 GQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp TEEEEEEESS-CHHHHHHHHHHHT
T ss_pred CeEEeeEcCC-CHHHHHHHHHHhh
Confidence 9887666687 8999999998765
No 126
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.33 E-value=6.4e-13 Score=136.80 Aligned_cols=101 Identities=17% Similarity=0.099 Sum_probs=90.8
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------ccchhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------HNEQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------~~~~~L~~k~g 925 (1578)
++.+|.++|++.+. . +++|.|||+||++|+.+.|.++++++.+. +.|+.||+ +.+++++++|+
T Consensus 18 v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 18 LIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp EEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred eeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 56789999998772 2 99999999999999999999999999885 89999999 88899999999
Q ss_pred ccccCCcEEEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 926 VGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 926 V~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|.+ +||+++|++|+.+..+.|..+.+.+..++++.+.+
T Consensus 90 v~~-~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 90 VEG-TPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp CCS-SSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred Cce-eCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 998 99999999999888888999999999999988755
No 127
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.33 E-value=2.2e-12 Score=146.29 Aligned_cols=100 Identities=18% Similarity=0.241 Sum_probs=86.9
Q ss_pred EEeeccccccceecccCCCCcEEEEEE--cCCCcccccccHHHHHHHHHhCC--CceEEEEEECcc-----chhhHhHcC
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFY--SDWCFACLQVEPIFKKLMDELSP--LGVGFFTVHVHN-----EQGLARRLG 925 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fy--apwCg~Ck~l~p~~~~lA~~l~~--~~v~~a~VDc~~-----~~~L~~k~g 925 (1578)
++.+|..||++.+ +.++++||.|| ||||+ +.|.|+++|+.+.+ ..+.|++|||+. ++++|++|+
T Consensus 18 v~~Lt~~nF~~vi---~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 18 CVDLDELSFEKTV---ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CEECCTTTHHHHH---TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred cEECCHHHHHHHH---hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 4578999999954 44789999999 99998 99999999999953 249999999998 899999999
Q ss_pred cc--ccCCcEEEEcCCcc--cccc--CCCCCHHHHHHHHHhhCC
Q psy12972 926 VG--SQLPQIALLTDGRT--SFFK--EPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 926 V~--~~~PTl~lf~~G~~--~~y~--~G~~s~~~L~~fi~~~lp 963 (1578)
|+ + ||||++|+ |+. ...+ .|.++.++|.+|+.+.++
T Consensus 91 V~~~~-~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKN-FPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTS-CCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCC-CCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 8 99999999 873 3444 689999999999998875
No 128
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.33 E-value=2.2e-12 Score=153.08 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+-||.|++|.||+|+++ +|+.||||+.+..-.. ..-+
T Consensus 47 ~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~-------------------------------------~~~~ 89 (329)
T 4aoj_A 47 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES-------------------------------------ARQD 89 (329)
T ss_dssp EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHH-------------------------------------HHHH
T ss_pred EEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHH-------------------------------------HHHH
Confidence 46999999999999864 5899999998643111 0124
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------------hcCCCHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL--------------EKGFSLADVDRKL 548 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~--------------~~~~~~~~v~~~l 548 (1578)
|.+|++.+.+++ |..-|.+=.++.+ ....+|||||++|.+|.++..-. ...++..++...+
T Consensus 90 f~~E~~il~~l~----HpnIV~l~g~~~~-~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 90 FQREAELLTMLQ----HQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHTTCC----CTTBCCEEEEECS-SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCcEEEEEEE-CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 677888776653 4344444444422 34568999999999998864311 1236666676766
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
.++. +..+|..|++|||+||.|||++ .+++.|||....+
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~ 208 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceec
Confidence 6666 7889999999999999999965 5999999987433
No 129
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.33 E-value=1.1e-12 Score=133.14 Aligned_cols=103 Identities=17% Similarity=0.313 Sum_probs=89.3
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+++ |.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+.+++++|+|.+ +||+
T Consensus 19 ~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~~~~l~~~~~v~~-~Pt~ 95 (124)
T 1xfl_A 19 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDELKSVASDWAIQA-MPTF 95 (124)
T ss_dssp EEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTSHHHHHHTTCCS-SSEE
T ss_pred EEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECccCHHHHHHcCCCc-cCEE
Confidence 345 668888877542 147899999999999999999999999999986 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+......| .+.++|.+++.+.+
T Consensus 96 ~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 96 MFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred EEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 99999998776767 58899999998765
No 130
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.33 E-value=2.9e-12 Score=147.99 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... . + .+-.+.+|+
T Consensus 19 ~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~--------------------------~------~~~~~~~Ei 64 (275)
T 3hyh_A 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK--S--------------------------D------MQGRIEREI 64 (275)
T ss_dssp EEEEC---CCEEEEECTTTCCEEEEEEEECC----------------------------------------CHHHHHHHH
T ss_pred EEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCC--H--------------------------H------HHHHHHHHH
Confidence 67999999999999964 89999999986532110 0 0 011356777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.++++. |..-|.+=.++.+ ...-+|||||++| .+.+... ....++..++...+.+++ ++.+|..|++|||
T Consensus 65 ~il~~l~----HpnIv~~~~~~~~-~~~~~ivmEy~~g-~L~~~l~-~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRD 137 (275)
T 3hyh_A 65 SYLRLLR----HPHIIKLYDVIKS-KDEIIMVIEYAGN-ELFDYIV-QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 137 (275)
T ss_dssp HHHHHCC----CTTBCCEEEEEEC-SSEEEEEEECCCE-EHHHHHH-HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHCC----CCCCCeEEEEEEE-CCEEEEEEeCCCC-CHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 7776653 3333444455432 3445799999954 6655432 345677777776666666 7899999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
+||.|||+. .++++|||.+..
T Consensus 138 iKP~NILl~~~~~vkl~DFGla~~ 161 (275)
T 3hyh_A 138 LKPENLLLDEHLNVKIADFGLSNI 161 (275)
T ss_dssp CCTTTEEECTTCCEEECCSSCC--
T ss_pred CChHHeEECCCCCEEEeecCCCee
Confidence 999999964 599999998743
No 131
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.00 E-value=1.4e-13 Score=133.75 Aligned_cols=103 Identities=23% Similarity=0.411 Sum_probs=91.4
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
+.+++.++|.+.+.. .+++++|.||++||++|+.+.|.++++++.+.+. +.++.||++.+.+++++|+|.+ +||++
T Consensus 3 v~~l~~~~~~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~-~Pt~~ 78 (106)
T 2yj7_A 3 VIEVTDENFEQEVLK--SDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK-VKVVKVNVDENPNTAAQYGIRS-IPTLL 78 (106)
Confidence 457889999987753 3789999999999999999999999999998764 9999999999999999999998 99999
Q ss_pred EEcCCccccccCCCCCHHHHHHHHHhh
Q psy12972 935 LLTDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 935 lf~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+|++|+....+.|..+.+++.+|+.+.
T Consensus 79 ~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 79 LFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999998877777888889999998754
No 132
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.31 E-value=1.5e-12 Score=130.09 Aligned_cols=93 Identities=20% Similarity=0.318 Sum_probs=81.4
Q ss_pred ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCc
Q psy12972 861 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGR 940 (1578)
Q Consensus 861 ~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~ 940 (1578)
++|++.+ . .+++++|.||++||++|+.+.|.++++++.+.+ +.++.||++.+++++++|+|.+ +||+++|++|+
T Consensus 21 ~~~~~~~-~--~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~~~~l~~~~~v~~-~Pt~~~~~~G~ 94 (114)
T 2oe3_A 21 TEFRNLI-K--QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDESPDIAKECEVTA-MPTFVLGKDGQ 94 (114)
T ss_dssp HHHHHHH-H--HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTTCHHHHHHTTCCS-BSEEEEEETTE
T ss_pred HHHHHHH-h--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCCCHHHHHHCCCCc-ccEEEEEeCCe
Confidence 4455544 3 368999999999999999999999999999875 8999999999999999999998 99999999999
Q ss_pred cccccCCCCCHHHHHHHHHh
Q psy12972 941 TSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 941 ~~~y~~G~~s~~~L~~fi~~ 960 (1578)
....+.|.. .++|.+++++
T Consensus 95 ~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 95 LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEEEEESSC-HHHHHHHHHT
T ss_pred EEEEEeCCC-HHHHHHHHHh
Confidence 876666877 8999999864
No 133
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.31 E-value=1.8e-12 Score=152.18 Aligned_cols=132 Identities=17% Similarity=0.091 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|++ +|+.||||+....-... ..++.|..
T Consensus 9 ~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~--------------------------------------~~~e~Ei~ 49 (303)
T 3hmm_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS--------------------------------------WFREAEIY 49 (303)
T ss_dssp EEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH--------------------------------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh--------------------------------------HHHHHHHH
Confidence 5799999999999987 69999999986431110 01122332
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--C-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--S-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
.+.+ +.|..-|.+=.+..+- + ..-+|||||++|.+|.++ +...+++.+...+.+.++. +..+|..
T Consensus 50 ~~~~----l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~--l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~ 123 (303)
T 3hmm_A 50 QTVM----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDY--LNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp TSTT----CCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHH--HHHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred HHhc----CCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHH--HHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 2222 2333334333333211 1 134799999999999987 4567788888777777766 6677765
Q ss_pred ----CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ----GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ----G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|||+||.|||+. .+++.|||...
T Consensus 124 ~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 999999999999965 59999999753
No 134
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.31 E-value=9.6e-13 Score=149.35 Aligned_cols=188 Identities=15% Similarity=0.200 Sum_probs=115.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeee--cc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHY--DL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~--~~---~~~~~~i~g~~~ 820 (1578)
..++..+|+..+.. ++++|+|+||||||+||+++.|.|+++++.+++. .+.++.+++ +. +|+..++.+.
T Consensus 15 ~~l~~~~f~~~i~~--~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~-- 90 (244)
T 3q6o_A 15 TLLQADTVRGAVLG--SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF-- 90 (244)
T ss_dssp EEECTTTHHHHHSS--CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS--
T ss_pred eeCChhhHHHHHhh--CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc--
Confidence 45667788888854 5689999999999999999999999999999872 333333332 21 5555555544
Q ss_pred ccccccccccCccccccccccc------cCccCcc---cceeEE-----------------EeeccccccceecccCCCC
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGFN------FPFEEHD---ISLFHK-----------------LSTTHWNFEKNYIPKSYTT 874 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~~------~~~~~~~---i~~~~v-----------------i~Lt~~nF~~~vl~~s~~~ 874 (1578)
||+.+|..+-. ..+.+.. +..+.. ..++.+++.+.+.. +..+
T Consensus 91 -----------Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~-~~~~ 158 (244)
T 3q6o_A 91 -----------PTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFAR-NNEE 158 (244)
T ss_dssp -----------SEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHH-CCCS
T ss_pred -----------CEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhc-CCCc
Confidence 88877775321 1122211 110000 01223344443322 3345
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEE-cCCccccccCCCCCHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQ 952 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~ 952 (1578)
+..+.|....| +...+++..+... ++.+..++- .+.+++++|||++ +||+++| ++|+...+....-+.+
T Consensus 159 ~~al~f~~~~~-------~~~~~~~~d~~~~~~i~v~~~~~-~~~~l~~~f~v~~-~Pslvl~~~~g~~~~~~~~~~~r~ 229 (244)
T 3q6o_A 159 YLALIFEXGGS-------YLAREVALDLSQHKGVAVRRVLN-TEANVVRKFGVTD-FPSCYLLFRNGSVSRVPVLMESRS 229 (244)
T ss_dssp EEEEEEECTTC-------CHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC-SSEEEEEETTSCEEECCCSSSSHH
T ss_pred eEEEEEEECCc-------chHHHHHHHhccCCceEEEEEeC-chHHHHHHcCCCC-CCeEEEEeCCCCeEeeccccccHH
Confidence 66666776543 2445566666533 378877764 4579999999997 9999887 4666666554444444
Q ss_pred HHHHHHHh
Q psy12972 953 KMVEFFRL 960 (1578)
Q Consensus 953 ~L~~fi~~ 960 (1578)
.+..++++
T Consensus 230 ~~~~~l~~ 237 (244)
T 3q6o_A 230 FYTAYLQR 237 (244)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 55555543
No 135
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.30 E-value=3.7e-12 Score=149.14 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=87.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.||+|+||+|+.+ +|+.||||+.+-.-.+. .. -.+.+|+
T Consensus 11 ~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~------------------------------~~------~~~~~E~ 54 (299)
T 4g31_A 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNREL------------------------------AR------EKVMREV 54 (299)
T ss_dssp EEEEECC--EEEEEEETTTCCEEEEEEEEECSSHH------------------------------HH------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHH------------------------------HH------HHHHHHH
Confidence 67999999999999965 89999999875321100 00 1245677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----------ceEEEEeccCCCcCCchhhHhhcC----CCHHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----------TRVLTTEFIDGVKISDKEGLLEKG----FSLADVDRKLFTAF 552 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----------~~VLVME~i~G~~l~d~~~l~~~~----~~~~~v~~~l~~~~ 552 (1578)
+.+.++ .|..-|.+=..+.+-.+ .-+|||||++|.+|.++.. ..+ .+...+...+.+++
T Consensus 55 ~il~~l----~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~--~~~~~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 55 KALAKL----EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMN--GRCTIEERERSVCLHIFLQIA 128 (299)
T ss_dssp HHHTTC----CCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHH--TCCSGGGSCHHHHHHHHHHHH
T ss_pred HHHHhC----CCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHH--hcCCCChhHHHHHHHHHHHHH
Confidence 666554 23333443333322111 1269999999999988743 222 22233334444444
Q ss_pred --HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 --AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 --l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++.+|..|++|||+||+|||+. .++++|||.+..+
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~ 168 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC---
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceec
Confidence 7889999999999999999964 5999999986543
No 136
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.29 E-value=1.7e-12 Score=135.03 Aligned_cols=101 Identities=10% Similarity=0.274 Sum_probs=83.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+.++|++.+.. ..+++++|.|||+||++|+.+.|.++++++.+.+. +.++.||++++++++++|+|.+ +||+++|++
T Consensus 10 ~~~~~~~~v~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~~~~~~~i~~-~Pt~~~~~~ 86 (142)
T 1qgv_A 10 NGWQVDQAILS-EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDITEVPDFNKMYELYD-PCTVMFFFR 86 (142)
T ss_dssp SHHHHHHHHHT-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTSSCSCS-SCEEEEEET
T ss_pred CHHHHHHHHHh-cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccccCHHHHHHcCCCC-CCEEEEEEC
Confidence 46678776643 13789999999999999999999999999999765 9999999999999999999998 999999999
Q ss_pred Cccccc---------cCCCCC-HHHHHHHHHhhC
Q psy12972 939 GRTSFF---------KEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 939 G~~~~y---------~~G~~s-~~~L~~fi~~~l 962 (1578)
|+.+.. ..|..+ .+++.+++.+.+
T Consensus 87 G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 87 NKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp TEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 986642 224443 677777776544
No 137
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.29 E-value=8.6e-13 Score=132.13 Aligned_cols=98 Identities=17% Similarity=0.264 Sum_probs=80.4
Q ss_pred eeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----ccchhhHhHcCccccCCc
Q psy12972 857 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----HNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc----~~~~~L~~k~gV~~~~PT 932 (1578)
.++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+... +.++.++. +...+++++|+|.+ +||
T Consensus 16 ~~~~~~~~~~~---~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~i~~-~Pt 90 (118)
T 1zma_A 16 VTTVVRAQEAL---DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH-IYFINSEEPSQLNDLQAFRSRYGIPT-VPG 90 (118)
T ss_dssp ECCHHHHHHHH---HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC-CEEEETTCGGGHHHHHHHHHHHTCCS-SCE
T ss_pred cCCHHHHHHHH---hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe-EEEEECCCcCcHHHHHHHHHHcCCCC-CCe
Confidence 46778888766 34679999999999999999999999999988643 55542222 23358999999998 999
Q ss_pred EEEEcCCccccccCCCCCHHHHHHHHH
Q psy12972 933 IALLTDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 933 l~lf~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
+++|++|+....+.|..+.++|.+|+.
T Consensus 91 ~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999999998877789999999999985
No 138
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.29 E-value=5e-13 Score=132.93 Aligned_cols=66 Identities=32% Similarity=0.479 Sum_probs=61.3
Q ss_pred cCCCcccccccccCCH--HHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 636 SLDPYETLGVPRTASL--QEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~--~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
..|+|++|||+++++. ++||+|||++++++||||+++ .++|++|++||++|+||.+|+.||.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 4689999999999998 999999999999999999876 57999999999999999999999987754
No 139
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.28 E-value=1e-12 Score=138.77 Aligned_cols=72 Identities=28% Similarity=0.619 Sum_probs=64.5
Q ss_pred ccccCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh-------hHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP-------TAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.+...|+|++|||+++++.++||+|||++++++||||++.. .+.++|++|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 44567999999999999999999999999999999998753 3678999999999999999999999976543
No 140
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.28 E-value=4.2e-12 Score=143.41 Aligned_cols=100 Identities=16% Similarity=0.142 Sum_probs=87.1
Q ss_pred EEeeccccccceecccCCCCcEEEEEEc--CCCcccccccHHHHHHHHHhCC-CceEEEEEE-----CccchhhHhHcCc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYS--DWCFACLQVEPIFKKLMDELSP-LGVGFFTVH-----VHNEQGLARRLGV 926 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~Fya--pwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VD-----c~~~~~L~~k~gV 926 (1578)
++.+|+.||++.+ ..++++||.||| |||+ +.|.|+++|..+.+ .++.|++|| |+.++++|++|+|
T Consensus 7 v~~Lt~~nF~~~i---~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 7 ALPLDTVTFYKVI---PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp CEECCTTHHHHHG---GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred ceECCHHHHHHHH---cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 4578999999965 346899999999 9999 99999999999975 249999999 6669999999999
Q ss_pred c--ccCCcEEEEcCCc--cccccCCCCCHHHHHHHHHhhC
Q psy12972 927 G--SQLPQIALLTDGR--TSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 927 ~--~~~PTl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+ + ||||++|++|+ ....+.|.++.+.|.+|+.+..
T Consensus 80 ~~~~-~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKES-YPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGG-CSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCC-CCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 8 99999999998 3445669999999999999874
No 141
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.28 E-value=2.4e-12 Score=127.04 Aligned_cols=103 Identities=18% Similarity=0.359 Sum_probs=88.9
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+
T Consensus 7 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~ 83 (113)
T 1ti3_A 7 IACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDELKAVAEEWNVEA-MPTF 83 (113)
T ss_dssp EEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTTCHHHHHHHHCSS-TTEE
T ss_pred eEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccccHHHHHhCCCCc-ccEE
Confidence 344 668888877542 247899999999999999999999999999986 49999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
++|++|+......| .+.++|.+++.+.+
T Consensus 84 ~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 84 IFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 99999998777767 68889999998754
No 142
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.27 E-value=3.4e-12 Score=131.08 Aligned_cols=104 Identities=13% Similarity=0.255 Sum_probs=87.1
Q ss_pred EEEeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCc
Q psy12972 854 HKLSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQ 932 (1578)
Q Consensus 854 ~vi~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PT 932 (1578)
.+++++. ++|.+.+ ....+++++|.||++||++|+.+.|.++++++.+ ++.++.||++.+.+++++|+|.+ +||
T Consensus 21 ~v~~l~~~~~~~~~l-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~~~~l~~~~~v~~-~Pt 95 (133)
T 3cxg_A 21 IYIELKNTGSLNQVF-SSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDIHPKLNDQHNIKA-LPT 95 (133)
T ss_dssp EEEECCCTTHHHHHH-TC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTTCHHHHHHTTCCS-SSE
T ss_pred cEEEecChhHHHHHH-HhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccchHHHHHhcCCCC-CCE
Confidence 3456765 7777655 3334689999999999999999999999998877 48999999999999999999998 999
Q ss_pred EEEEc--CCc--cccccCCCCCHHHHHHHHHhhCC
Q psy12972 933 IALLT--DGR--TSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 933 l~lf~--~G~--~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+++|+ +|+ ......|. +.++|.+++.+.+.
T Consensus 96 ~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 96 FEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 99997 887 56666676 88999999988764
No 143
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=2.4e-12 Score=132.71 Aligned_cols=100 Identities=12% Similarity=0.069 Sum_probs=85.5
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIAL 935 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~l 935 (1578)
..+|.++|.+.+...+.+++++|.|||+||++|+.+.|.|+++++.+. ++.|+.||++.+. ++|+|.+ +||+++
T Consensus 13 ~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~~~---~~~~i~~-~Pt~~~ 86 (135)
T 2dbc_A 13 REISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNSCI---EHYHDNC-LPTIFV 86 (135)
T ss_dssp EECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSSSC---SSCCSSC-CSEEEE
T ss_pred EEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhcCc---ccCCCCC-CCEEEE
Confidence 457899999988655445799999999999999999999999999985 3899999998874 7899998 999999
Q ss_pred EcCCccccccCCCC-------CHHHHHHHHHhh
Q psy12972 936 LTDGRTSFFKEPSF-------SVQKMVEFFRLK 961 (1578)
Q Consensus 936 f~~G~~~~y~~G~~-------s~~~L~~fi~~~ 961 (1578)
|++|+.+....|.. +.++|..++.+.
T Consensus 87 ~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 87 YKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred EECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 99998776665654 678899999765
No 144
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.27 E-value=3.9e-13 Score=142.53 Aligned_cols=69 Identities=30% Similarity=0.473 Sum_probs=60.2
Q ss_pred ccccCCCcccccccccCC--HHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccCCC
Q psy12972 633 CAVSLDPYETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFGTT 704 (1578)
Q Consensus 633 ~~~~~d~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~~ 704 (1578)
.....|+|++|||+++|+ .++||+|||++++++|||++++ +++|++|++||++|+||.+|+.||++|..
T Consensus 7 ~~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~~ 77 (174)
T 2pf4_E 7 REESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 77 (174)
T ss_dssp HHHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGGC
T ss_pred ccccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCCc
Confidence 344579999999999998 6999999999999999999876 47999999999999999999999999863
No 145
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.27 E-value=3.5e-12 Score=126.89 Aligned_cols=105 Identities=17% Similarity=0.305 Sum_probs=89.8
Q ss_pred Eee-ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 856 LST-THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 856 i~L-t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+.+ +.++|++.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+
T Consensus 9 ~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~-~Pt~ 85 (118)
T 2vm1_A 9 IACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDELKDVAEAYNVEA-MPTF 85 (118)
T ss_dssp EECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCS-BSEE
T ss_pred EEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEcccCHHHHHHcCCCc-CcEE
Confidence 344 568888877542 136899999999999999999999999999986 48999999999999999999998 9999
Q ss_pred EEEcCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 934 ALLTDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
++|++|+....+.| .+.++|.+++.+.+..
T Consensus 86 ~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 86 LFIKDGEKVDSVVG-GRKDDIHTKIVALMGS 115 (118)
T ss_dssp EEEETTEEEEEEES-CCHHHHHHHHHHHHC-
T ss_pred EEEeCCeEEEEecC-CCHHHHHHHHHHHhcc
Confidence 99999998777767 5889999999887643
No 146
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.26 E-value=1.1e-12 Score=153.73 Aligned_cols=137 Identities=17% Similarity=0.096 Sum_probs=92.6
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... .+ ...+.
T Consensus 30 ~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~ 74 (304)
T 3ubd_A 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RD---------------------------------RVRTK 74 (304)
T ss_dssp EEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EE---------------------------------CC---
T ss_pred EEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HH---------------------------------HHHHH
Confidence 67999999999999853 57899999986542110 00 00123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .|..-|.+=.++.+ ...-+|||||++|.+|.+... ....++..++...+.+++ ++.+|..|++
T Consensus 75 ~E~~il~~l----~HpnIv~l~~~~~~-~~~~~ivmEy~~gg~L~~~l~-~~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii 148 (304)
T 3ubd_A 75 MERDILVEV----NHPFIVKLHYAFQT-EGKLYLILDFLRGGDLFTRLS-KEVMFTEEDVKFYLAELALALDHLHSLGII 148 (304)
T ss_dssp ---CCCCCC----CCTTEECEEEEEEE-TTEEEEEECCCTTCEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHC----CCCCCCeEEEEEEE-CCEEEEEEEcCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 454444332 23333444444432 344579999999999988743 334677777776666666 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|||+||.|||+. .++++|||.+..
T Consensus 149 HRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 149 YRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp CSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred CCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999964 699999998643
No 147
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.25 E-value=1.1e-11 Score=148.47 Aligned_cols=138 Identities=16% Similarity=0.068 Sum_probs=98.0
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +++.||||+.+.+.... ..-+
T Consensus 70 ~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~------------------------------------~~~~ 113 (353)
T 4ase_A 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 113 (353)
T ss_dssp EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChH------------------------------------HHHH
Confidence 57999999999999864 35789999987543211 0124
Q ss_pred HHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---------------hcCCCHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLP-YVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---------------EKGFSLADVDR 546 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---------------~~~~~~~~v~~ 546 (1578)
|.+|++.+.++. +++ -|.+-.++.+-...-.|||||++|.+|.++..-. ...++...+..
T Consensus 114 ~~~E~~il~~l~----hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 189 (353)
T 4ase_A 114 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189 (353)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHH
T ss_pred HHHHHHHHHHcC----CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHH
Confidence 577887777764 334 3444444433233457999999999999875321 12356666666
Q ss_pred HHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 547 KLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 547 ~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+.++. ++.+|..|+||||+||.|||++ .+++.|||.+..
T Consensus 190 ~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~ 234 (353)
T 4ase_A 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234 (353)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred HHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhh
Confidence 666655 7889999999999999999975 599999998743
No 148
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.25 E-value=1.4e-12 Score=121.62 Aligned_cols=63 Identities=19% Similarity=0.321 Sum_probs=57.0
Q ss_pred cccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhcc
Q psy12972 634 AVSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYD 699 (1578)
Q Consensus 634 ~~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD 699 (1578)
....++|++|||+++ +|.++||+|||++++++|||++++ .++|++|++||++|+|+.+|..++
T Consensus 8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 344689999999999 999999999999999999999865 679999999999999999998743
No 149
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.25 E-value=2.5e-12 Score=132.47 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=88.3
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
+.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+++++++|+|.+ +||+++|+
T Consensus 31 ~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~~~~~ 107 (139)
T 3d22_A 31 TKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDELSDFSASWEIKA-TPTFFFLR 107 (139)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTTSHHHHHHTTCCE-ESEEEEEE
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcccHHHHHHcCCCc-ccEEEEEc
Confidence 578898876432 247899999999999999999999999999985 38999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|+....+.|. +.++|.+++.+.++
T Consensus 108 ~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 108 DGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp TTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 99987777687 88999999987763
No 150
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.24 E-value=1.5e-11 Score=145.93 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=98.2
Q ss_pred hhHHHHHHHHhCCChhhhccccCC----------cccccccceEEEEEEecC-----CCEEEEEEecchhhhhHHHHHHH
Q psy12972 385 GEVDQLFLEDFGCTHSQLFRSFDE----------NPIAAASLAQVFRAVTKE-----GVEVAVKVQYIDLRERFVGDIAT 449 (1578)
Q Consensus 385 ~~v~~~~~~~lG~~~~~iF~~fd~----------~PlasaSiaQVhrA~l~~-----G~~VAVKVq~P~i~~~~~~Dl~~ 449 (1578)
+.....++..+|.++.+.+..|+. +.||.|++|+||+|+... +..||||+.+++....
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~------- 88 (333)
T 1mqb_A 16 TTENLYFQGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK------- 88 (333)
T ss_dssp ----------------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHH-------
T ss_pred CCccccccccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHH-------
Confidence 345566777788888888888877 899999999999998752 3469999987653211
Q ss_pred HHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCC
Q psy12972 450 VQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKIS 529 (1578)
Q Consensus 450 l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~ 529 (1578)
.+.+|.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.
T Consensus 89 -----------------------------~~~~~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~ 134 (333)
T 1mqb_A 89 -----------------------------QRVDFLGEAGIMGQFS----HHNIIRLEGVI-SKYKPMMIITEYMENGALD 134 (333)
T ss_dssp -----------------------------HHHHHHHHHHHHHTCC----CTTBCCEEEEE-CSSSSEEEEEECCTTEEHH
T ss_pred -----------------------------HHHHHHHHHHHHHhCC----CCCCCcEEEEE-ecCCCcEEEEeCCCCCcHH
Confidence 1124566776666552 22222222222 2335568999999999998
Q ss_pred chhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 530 DKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 530 d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++.......++...+...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 135 ~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 135 KFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp HHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 87543345678777777776666 8889999999999999999965 599999998644
No 151
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.23 E-value=5.1e-12 Score=126.89 Aligned_cols=100 Identities=18% Similarity=0.224 Sum_probs=85.1
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
+..+|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+ + ++.|+.||++.+++++++|+|.+ +||+++|++
T Consensus 11 ~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~-~v~~~~vd~~~~~~~~~~~~i~~-~Pt~~~~~~ 85 (118)
T 2f51_A 11 THEALLNRIKE--APGLVLVDFFATWCGPCQRLGQILPSIAEAN-K-DVTFIKVDVDKNGNAADAYGVSS-IPALFFVKK 85 (118)
T ss_dssp CHHHHHHHHHH--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-T-TSEEEEEETTTCHHHHHHTTCCS-SSEEEEEEE
T ss_pred CHHHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-C-CeEEEEEECCCCHHHHHhcCCCC-CCEEEEEeC
Confidence 56778765543 3789999999999999999999999999998 3 49999999999999999999998 999999988
Q ss_pred ----CccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 939 ----GRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 939 ----G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+......|..+ ++|.+.+.+..++
T Consensus 86 ~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 86 EGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp ETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred CCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 887766767654 6799999888765
No 152
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.23 E-value=2.1e-11 Score=141.63 Aligned_cols=142 Identities=14% Similarity=0.160 Sum_probs=93.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
++||+|++|+||+|+..+|+.||||+.+++.... ..+ ...+ .++ ...|+. .....+.+|++
T Consensus 96 ~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~-~~~-~~~~------~~~----~~~w~~-------~~~~~~~~E~~ 156 (282)
T 1zar_A 96 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF-KKV-KEKR------DYG----DLHFSV-------LAIRSARNEFR 156 (282)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECC-------CC-CC-----------------CHHH-------HHHHHHHHHHH
T ss_pred CEeccCCCceEEEEEeCCCCEEEEEEEECCCCch-hhh-hhhh------hhc----chhhHH-------HHHHHHHHHHH
Confidence 6899999999999999889999999998653211 000 0000 000 111211 12346788888
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCCCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADPHS 568 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~DpHP 568 (1578)
.+.++. . +.+|.++.. +..+|||||++|.+|.++ . .-.+..++..++.+ +..+|..|++|+|+||
T Consensus 157 ~l~~l~------~-~~v~~~~~~--~~~~lvmE~~~g~~L~~l-~----~~~~~~i~~qi~~~-l~~lH~~giiHrDlkp 221 (282)
T 1zar_A 157 ALQKLQ------G-LAVPKVYAW--EGNAVLMELIDAKELYRV-R----VENPDEVLDMILEE-VAKFYHRGIVHGDLSQ 221 (282)
T ss_dssp HHHHTT------T-SSSCCEEEE--ETTEEEEECCCCEEGGGC-C----CSCHHHHHHHHHHH-HHHHHHTTEECSCCST
T ss_pred HHHhcc------C-CCcCeEEec--cceEEEEEecCCCcHHHc-c----hhhHHHHHHHHHHH-HHHHHHCCCEeCCCCH
Confidence 888876 1 567776643 566999999999999883 1 12345566665554 6778999999999999
Q ss_pred CCCCCC--eeEEecCCch
Q psy12972 569 GNDVNT--WLYPVDLGDK 584 (1578)
Q Consensus 569 GNilv~--~v~liDfG~~ 584 (1578)
.|||+. .++++|||..
T Consensus 222 ~NILl~~~~vkl~DFG~a 239 (282)
T 1zar_A 222 YNVLVSEEGIWIIDFPQS 239 (282)
T ss_dssp TSEEEETTEEEECCCTTC
T ss_pred HHEEEECCcEEEEECCCC
Confidence 999953 4666666643
No 153
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.22 E-value=1.8e-11 Score=148.96 Aligned_cols=138 Identities=17% Similarity=0.147 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ .-.+.+|+
T Consensus 60 ~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~--~~---------------------------------~~~~~~Ei 104 (398)
T 4b99_A 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV--TN---------------------------------AKRTLREL 104 (398)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSH--HH---------------------------------HHHHHHHH
T ss_pred EEEecccCeEEEEEEECCCCCEEEEEEECccccch--HH---------------------------------HHHHHHHH
Confidence 68999999999999964 89999999985321100 00 01234677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. |...|.+-.++.... ..-+|||||++| .|.+... ....++...+...+.+++ +..+|..|
T Consensus 105 ~il~~l~----HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g-~L~~~i~-~~~~l~~~~~~~~~~qil~al~ylH~~~ 178 (398)
T 4b99_A 105 KILKHFK----HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIH-SSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178 (398)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSSCTTTCCCEEEEEECCSE-EHHHHHT-SSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCcceEeeeeecccccccCCEEEEEEeCCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 7776653 333455544443211 234799999987 3544422 235677777776666666 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
++|||+||.|||+. .++++|||....+
T Consensus 179 iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 179 VIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred CcCCCcCccccccCCCCCEEEeecceeeec
Confidence 99999999999964 6999999987543
No 154
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.22 E-value=4.2e-12 Score=141.72 Aligned_cols=103 Identities=16% Similarity=0.161 Sum_probs=88.2
Q ss_pred EEee-ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..+ +.++|.+.+...+.+++++|.||+|||++|+.+.|.|.++|..+. ++.|++||++ ++.+|++|+|.+ +||+
T Consensus 101 v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~-~~~l~~~~~i~~-~PTl 176 (217)
T 2trc_P 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS-NTGAGDRFSSDV-LPTL 176 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH-HHTCSTTSCGGG-CSEE
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC-cHHHHHHCCCCC-CCEE
Confidence 3456 789999988665556899999999999999999999999999985 3899999999 888999999998 9999
Q ss_pred EEEcCCccccccCCCCCH-------HHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPSFSV-------QKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~~s~-------~~L~~fi~~~ 961 (1578)
++|++|+.+..+.|..+. ++|..|+.+.
T Consensus 177 ~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 177 LVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999877666676653 7888888754
No 155
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.22 E-value=2.1e-11 Score=146.47 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=94.9
Q ss_pred hhhhccccCCcccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
+.+.|.-. +.||.|++|+||+|+.+ +|+.||||+..+.-..
T Consensus 19 l~~~Y~i~--~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--------------------------------- 63 (361)
T 4f9c_A 19 LSNVFKIE--DKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP--------------------------------- 63 (361)
T ss_dssp GGGTCEEE--EEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH---------------------------------
T ss_pred ccCcEEEE--EEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH---------------------------------
Confidence 34555544 57999999999999853 5789999987543110
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..+.+|.+.+.++. .+..-|.+-.++.+ ...-+|||||++|..|.++. .+++..++...+.+++
T Consensus 64 ------~~~~~E~~~l~~~~---~h~nIv~l~~~~~~-~~~~~lvmE~~~g~~L~~~~----~~l~~~~~~~~~~qll~a 129 (361)
T 4f9c_A 64 ------IRIAAELQCLTVAG---GQDNVMGVKYCFRK-NDHVVIAMPYLEHESFLDIL----NSLSFQEVREYMLNLFKA 129 (361)
T ss_dssp ------HHHHHHHHHHHHTC---SBTTBCCCSEEEEE-TTEEEEEEECCCCCCHHHHH----TTCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhc---CCCCCceEEEEEEE-CCEEEEEEeCCCcccHHHHH----cCCCHHHHHHHHHHHHHH
Confidence 01233444443331 12223444444432 34557999999999988763 3577777766666666
Q ss_pred HHHHHHcCccccCCCCCCCCC----CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN----TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv----~~v~liDfG~~~ 585 (1578)
++.+|..|++|||+||+|||+ +.++++|||.+.
T Consensus 130 l~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 130 LKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred HHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 889999999999999999996 468899999763
No 156
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.20 E-value=1.1e-12 Score=158.40 Aligned_cols=209 Identities=11% Similarity=0.078 Sum_probs=113.1
Q ss_pred HhcCCCCCChhHHHHHHHHh-hhcCCCChHHHHHHHhhhhcCcccccccccCCCchhHHHHHHHHHhhhhhhhhhhHHHH
Q psy12972 312 MVSLDHVLPRQYPHTLRALQ-DKCLLREKGEVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQALQDKCLLREKGEVDQL 390 (1578)
Q Consensus 312 lstr~dllP~~~~~~L~~Lq-d~~p~~~~~~~~~~~~~~~g~~~~~~~~~f~~~p~~~~~~~~~l~~~~~~~~~~~v~~~ 390 (1578)
-|++.+++++++.+.+..++ +.+++.+..++...+...+- .....+ .
T Consensus 16 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------------------------~ 63 (377)
T 3byv_A 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLW-NTGQPF-------------------------------R 63 (377)
T ss_dssp -CCTTHHHHHHHHHHCGGGCCCSTTC-CHHHHHHHHHHHTC-C-CCEE-------------------------------E
T ss_pred CCCCchHHHHHHHHhCcccccccccccccchhhhhhHHHhc-CCCCcE-------------------------------E
Confidence 46888899999999999998 88877776666555433220 000000 0
Q ss_pred HHHHhCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHH
Q psy12972 391 FLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWV 469 (1578)
Q Consensus 391 ~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~ 469 (1578)
+..+++.+ .+-|.- .++||+|++|+||+|+. .+|+.||||+.+...... ..+...+...+.++..+ ..++.
T Consensus 64 ~~~~~~~~-~~~y~~--~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l-~~l~h--- 135 (377)
T 3byv_A 64 VESELGER-PRTLVR--GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-SNAIKQMKEEVLRLRLL-RGIKN--- 135 (377)
T ss_dssp EEESSSCC-CEEEEE--EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CC-TTHHHHHHHHHHGGGGS-TTCCS---
T ss_pred EEeecCCC-CceEEE--cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccc-hHHHHHHHHHHHHHHhc-cccCC---
Confidence 00011110 111111 37899999999999996 579999999986432110 00111111111111111 11111
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC----------------CceEEEEeccCCCcCCchhh
Q psy12972 470 INELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS----------------STRVLTTEFIDGVKISDKEG 533 (1578)
Q Consensus 470 ~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~----------------t~~VLVME~i~G~~l~d~~~ 533 (1578)
.|+.++...+.... .++.+-. ...+|||||++ .+|.++..
T Consensus 136 ------------------pniv~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~ 191 (377)
T 3byv_A 136 ------------------QKQAKVHLRFIFPF-----DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGE 191 (377)
T ss_dssp ------------------HHHHHHHHCBCCCS-----EEEECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHH
T ss_pred ------------------HHHHHHHhhhhhhh-----hhhhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHH
Confidence 22333321111000 1111000 02569999995 48877643
Q ss_pred HhhcCCCH-------HHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 534 LLEKGFSL-------ADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 534 l~~~~~~~-------~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
-. ..++. ..+...+.+++ +..+|..|++|+|+||+|||+. .++++|||...
T Consensus 192 ~~-~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~ 254 (377)
T 3byv_A 192 VL-LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLV 254 (377)
T ss_dssp HH-HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCE
T ss_pred hc-cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhhe
Confidence 21 11222 33333444444 7889999999999999999975 69999999764
No 157
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.20 E-value=5.2e-12 Score=135.53 Aligned_cols=68 Identities=25% Similarity=0.417 Sum_probs=60.5
Q ss_pred ccCCCcccccccccCC--HHHHHHHhhhhhhhcCCCCCCChh------HHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 635 VSLDPYETLGVPRTAS--LQEIRKNYKRLVVEWHPDKNNDPT------AQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~as--~~eIk~ayr~l~~~~HPDk~~~~~------a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
...|||++|||+++++ .++||++||+++++||||++++.. +.++|++|++||++|+||.+|+.||...
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 3579999999999887 999999999999999999987532 6689999999999999999999999754
No 158
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.20 E-value=2.8e-12 Score=121.64 Aligned_cols=60 Identities=27% Similarity=0.349 Sum_probs=55.2
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCC--hhHHHHHHHHHHHHHHcCCHHHH
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNND--PTAQEKFLQLTEAYNILSDAERR 695 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R 695 (1578)
..++|++|||++++|.+|||+|||+++++||||+++. +.++++|++|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4688999999999999999999999999999999986 45889999999999999998666
No 159
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.18 E-value=3.1e-11 Score=112.74 Aligned_cols=83 Identities=19% Similarity=0.308 Sum_probs=74.0
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
.+.+|.||++||++|+++.|.++++++.+.+. +.+..||++++++++++|||.+ +||+++ +|+. .+.|..+.++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~--~~~G~~~~~~ 76 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDA-VEVEYINVMENPQKAMEYGIMA-VPTIVI--NGDV--EFIGAPTKEA 76 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSS-EEEEEEESSSSCCTTTSTTTCC-SSEEEE--TTEE--ECCSSSSSHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCc-eEEEEEECCCCHHHHHHCCCcc-cCEEEE--CCEE--eeecCCCHHH
Confidence 46799999999999999999999999998754 9999999999999999999998 999998 8876 4458788999
Q ss_pred HHHHHHhhC
Q psy12972 954 MVEFFRLKL 962 (1578)
Q Consensus 954 L~~fi~~~l 962 (1578)
|.+++.+.+
T Consensus 77 l~~~l~~~l 85 (85)
T 1fo5_A 77 LVEAIKKRL 85 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhC
Confidence 999998653
No 160
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.18 E-value=3.5e-11 Score=145.24 Aligned_cols=146 Identities=15% Similarity=0.154 Sum_probs=96.3
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+...|.....+.||.|++|+||+|+.. +|+.||||+.++.-..
T Consensus 85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~------------------------------------ 128 (373)
T 2x4f_A 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK------------------------------------ 128 (373)
T ss_dssp GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHH------------------------------------
T ss_pred cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccc------------------------------------
Confidence 344555555678999999999999964 7999999998753211
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..-.+.+|++.+.++. +...+.+-..+ ......+|||||++|.+|.+...-....++...+...+.+++ +..
T Consensus 129 -~~~~~~~E~~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 202 (373)
T 2x4f_A 129 -DKEEVKNEISVMNQLD----HANLIQLYDAF-ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRH 202 (373)
T ss_dssp -HHHHHHHHHHHHTTCC----CTTBCCEEEEE-ECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHH
T ss_pred -cHHHHHHHHHHHHhCC----CCCCCeEEEEE-EECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0112456666665542 22222222222 234556899999999999876443334577776666655655 788
Q ss_pred HHHcCccccCCCCCCCCC-----CeeEEecCCchhh
Q psy12972 556 IFQTGFVHADPHSGNDVN-----TWLYPVDLGDKFR 586 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv-----~~v~liDfG~~~~ 586 (1578)
+|..|++|+|+||+|||+ +.++++|||....
T Consensus 203 LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~ 238 (373)
T 2x4f_A 203 MHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238 (373)
T ss_dssp HHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred HHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence 999999999999999996 2599999997643
No 161
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=7.2e-12 Score=127.26 Aligned_cols=106 Identities=10% Similarity=0.255 Sum_probs=88.0
Q ss_pred eeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECc--cchhhHhHcCccccC
Q psy12972 857 STTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQL 930 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~ 930 (1578)
.++..+|.+.+... ..+++++|.||++||++|+.+.|.+ +++++.+... +.++.||++ .+..+|++|+|.+ +
T Consensus 10 ~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~v~~-~ 87 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH-FVNLKMDMEKGEGVELRKKYGVHA-Y 87 (130)
T ss_dssp CCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH-SEEEEECSSSTTHHHHHHHTTCCS-S
T ss_pred CcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC-eEEEEEecCCcchHHHHHHcCCCC-C
Confidence 35677887766322 2468999999999999999999999 7777766543 889999998 5779999999998 9
Q ss_pred CcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
||+++| ++|+....+.|..+.++|.+++++.+.+
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 999999 7898877677989999999999987754
No 162
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.17 E-value=9.6e-12 Score=152.08 Aligned_cols=107 Identities=20% Similarity=0.250 Sum_probs=91.2
Q ss_pred EEeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC-------ceEEEEEECccchhhHhHcCcc
Q psy12972 855 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-------GVGFFTVHVHNEQGLARRLGVG 927 (1578)
Q Consensus 855 vi~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-------~v~~a~VDc~~~~~L~~k~gV~ 927 (1578)
++.+|.++|++.+.. +..++++|.|||+||++|+.+.|.|+++++.+... .+.|++|||+.++++|++|+|.
T Consensus 25 V~~Lt~~~F~~~l~~-~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~ 103 (470)
T 3qcp_A 25 VVDLSGDDFSRVHRV-APLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDIN 103 (470)
T ss_dssp EEECSCSCGGGTCTT-GGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCC
T ss_pred cEECCHHHHHHHHHh-CCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCC
Confidence 567899999987743 33579999999999999999999999999999732 2999999999999999999999
Q ss_pred ccCCcEEEEcCCc--cccccCCCCCHHHHHHHHHhhCCC
Q psy12972 928 SQLPQIALLTDGR--TSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 928 ~~~PTl~lf~~G~--~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+ +||+++|.+|. ....+.|.++.+.| .|+.+++..
T Consensus 104 ~-~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~~ 140 (470)
T 3qcp_A 104 F-VPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLEV 140 (470)
T ss_dssp S-SCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCCH
T ss_pred c-cCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcCH
Confidence 8 99999997554 34556699999999 999887754
No 163
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.16 E-value=1.5e-11 Score=139.31 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=86.1
Q ss_pred EEee-ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcE
Q psy12972 855 KLST-THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 855 vi~L-t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl 933 (1578)
+..+ +.++|.+.+...+.+++++|.||||||++|+.+.|.|.++|..+.+ +.|++||++. ..++.+|+|.+ +||+
T Consensus 114 V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d~-~~l~~~~~I~~-~PTl 189 (245)
T 1a0r_P 114 VYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKASN-TGAGDRFSSDV-LPTL 189 (245)
T ss_dssp EEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHHH-HCCTTSSCTTT-CSEE
T ss_pred EEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCCc-HHHHHHCCCCC-CCEE
Confidence 3456 6889999886555578999999999999999999999999999864 8999999987 78999999998 9999
Q ss_pred EEEcCCccccccCCC-------CCHHHHHHHHHhh
Q psy12972 934 ALLTDGRTSFFKEPS-------FSVQKMVEFFRLK 961 (1578)
Q Consensus 934 ~lf~~G~~~~y~~G~-------~s~~~L~~fi~~~ 961 (1578)
++|++|+.+....|. ++.+.|..|+.+.
T Consensus 190 l~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 190 LVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp EEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred EEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999865443332 4567888888765
No 164
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.16 E-value=6.9e-12 Score=127.15 Aligned_cols=102 Identities=17% Similarity=0.318 Sum_probs=88.6
Q ss_pred ccccccceeccc-CCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEc
Q psy12972 859 THWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLT 937 (1578)
Q Consensus 859 t~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~ 937 (1578)
+.++|.+.+... ..+++++|.||++||++|+.+.|.++++++.+. ++.++.||++.+.+++++|+|.+ +||+++|+
T Consensus 21 ~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~-~Pt~~~~~ 97 (130)
T 1wmj_A 21 NKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDELKEVAEKYNVEA-MPTFLFIK 97 (130)
T ss_dssp SSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTTSGGGHHHHTCCS-SCCCCBCT
T ss_pred CHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccchHHHHHHcCCCc-cceEEEEe
Confidence 457788776542 247899999999999999999999999999986 48999999999999999999998 99999999
Q ss_pred CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 938 DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 938 ~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|+....+.| .+.++|.+++.+.+..
T Consensus 98 ~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 98 DGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp TTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred CCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9998777777 5889999999887743
No 165
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.16 E-value=1.7e-10 Score=131.10 Aligned_cols=185 Identities=11% Similarity=0.121 Sum_probs=122.4
Q ss_pred CCCcEEEEEEcCC--CcccccccHHHHHHHHHh---CCCc-eEEEEEECccchhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 872 YTTPHLILFYSDW--CFACLQVEPIFKKLMDEL---SPLG-VGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 872 ~~~~~LV~Fyapw--Cg~Ck~l~p~~~~lA~~l---~~~~-v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
-.++++|.||++| |++|+.+.|.++++|+.. ++.. |.|+++|+++++++|++|||++ +||+++| +| ...|
T Consensus 24 ~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~-~Pt~~i~-~g-~~~~- 99 (243)
T 2hls_A 24 MVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVER-VPTVAFL-GG-EVRW- 99 (243)
T ss_dssp CCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCS-SSEEEET-TT-TEEE-
T ss_pred CCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCc-CCEEEEE-CC-ceeE-
Confidence 3689999999999 999999999999999884 3322 8999999999999999999997 9999999 66 4444
Q ss_pred CCCCCHHHHHHHHHhhCCCc-cccccccccHHHHhhcccCCCcEEEE-Ee---ccCCchHHHHHHH-Hhhc----CCCeE
Q psy12972 946 EPSFSVQKMVEFFRLKLPYK-LIVPLSATNVDAFLDNWREDNKVHAL-LF---QRSLPVRLRYLIN-AFKH----RTTIV 1015 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~lp~~-vv~~it~~~~~~fl~~~~~~~~~~Vl-fF---~~~~~~~~~~~~~-a~~~----~~~v~ 1015 (1578)
.|..+.+.+.+|+...+... ....++++..+.+.+.. +.+.++ |+ |.........+.. +..+ ...+.
T Consensus 100 ~G~~~~~~l~~fv~~~l~~~~~~~~l~~~~~~~~~~~~---~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~ 176 (243)
T 2hls_A 100 TGIPAGEEIRALVEVIMRLSEDESGLEDATKEALKSLK---GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVIL 176 (243)
T ss_dssp ESCCCTTHHHHHHHHHHHHHTTCCCCCHHHHHHHHHCC---SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred cCCCcHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHcC---CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEE
Confidence 47778788999887643100 01223444444443322 344444 44 2222222222211 2222 15688
Q ss_pred EEEEEcccCCChhHHhhcCCCCCCcEEEEeccCCCCCccccccCCCCchhhhhhhhcC
Q psy12972 1016 FGVIVYDQEDSSSVFQRFKVPGDKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1016 Fg~v~~~~~~~~~l~~kf~V~~~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~n 1073 (1578)
|..+++ ..+.+++++|+|.+ .||+++ ++. . ...+..+...+..++...
T Consensus 177 ~~~vd~--~~~~~~~~~~~V~~-vPt~~i--~G~--~---~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 177 SEAVEA--YENPDIADKYGVMS-VPSIAI--NGY--L---VFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp EEEEET--TTCHHHHHHTTCCS-SSEEEE--TTE--E---EEESCCCHHHHHHHHHHH
T ss_pred EEEEEC--ccCHHHHHHcCCee-eCeEEE--CCE--E---EEeCCCCHHHHHHHHHHH
Confidence 877754 46788999999986 578877 221 1 134555666777777654
No 166
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.15 E-value=4.5e-11 Score=143.38 Aligned_cols=137 Identities=20% Similarity=0.153 Sum_probs=94.7
Q ss_pred cccccccceEEEEEE------ecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAV------TKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~------l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+ ..+|+.||||+.++.....
T Consensus 71 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------- 110 (365)
T 3e7e_A 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWE---------------------------------------- 110 (365)
T ss_dssp EEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHH----------------------------------------
T ss_pred EEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhH----------------------------------------
Confidence 469999999999994 4579999999987653221
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH----hhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL----LEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l----~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+..|.+.+++++.. .+...+.+-..+ ......+|||||++|.+|.++... ....++...+...+.+++ ++.+
T Consensus 111 ~~~e~~~~~~l~~~-~~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l 188 (365)
T 3e7e_A 111 FYIGTQLMERLKPS-MQHMFMKFYSAH-LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188 (365)
T ss_dssp HHHHHHHHHHSCGG-GGGGBCCEEEEE-ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhh-hhhhhhhhheee-ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 23344444444321 111112222222 234567899999999999987543 234577777777776666 8899
Q ss_pred HHcCccccCCCCCCCCCC--------------eeEEecCCchhhh
Q psy12972 557 FQTGFVHADPHSGNDVNT--------------WLYPVDLGDKFRL 587 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~--------------~v~liDfG~~~~l 587 (1578)
|..|++|+|+||.|||+. .++++|||....+
T Consensus 189 H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~ 233 (365)
T 3e7e_A 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM 233 (365)
T ss_dssp HTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred hhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence 999999999999999973 4999999987443
No 167
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.15 E-value=5.2e-11 Score=139.26 Aligned_cols=147 Identities=18% Similarity=0.238 Sum_probs=94.5
Q ss_pred HHhCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHH
Q psy12972 393 EDFGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVIN 471 (1578)
Q Consensus 393 ~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~ 471 (1578)
..++....+.|... +.||.|++|.||+|+.. +|+.||||+....-. ..
T Consensus 21 ~~~~~~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------------------------~~---- 69 (314)
T 3com_A 21 DSLTKQPEEVFDVL--EKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD-------------------------LQ---- 69 (314)
T ss_dssp ---------CEEEE--EECC----CEEEEEEETTTCCEEEEEEEETTSC-------------------------CH----
T ss_pred hhhhhcchhhhhhh--eeeccCCCeEEEEEEECCCCCEEEEEecCchHH-------------------------HH----
Confidence 44555556666655 67999999999999976 699999998864210 00
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHH
Q psy12972 472 ELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTA 551 (1578)
Q Consensus 472 e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~ 551 (1578)
++.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++.......++...+...+.++
T Consensus 70 ----------~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i 134 (314)
T 3com_A 70 ----------EIIKEISIMQQC----DSPHVVKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQST 134 (314)
T ss_dssp ----------HHHHHHHHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHhC----CCCCCccEEEEEE-eCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 134455555443 2222222223322 2345689999999999998865455667877777766666
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 135 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 173 (314)
T 3com_A 135 LKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAG 173 (314)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccch
Confidence 5 7889999999999999999964 59999999764
No 168
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.15 E-value=1e-11 Score=132.77 Aligned_cols=67 Identities=22% Similarity=0.369 Sum_probs=60.4
Q ss_pred CCCcccccccccC--CHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccccCC
Q psy12972 637 LDPYETLGVPRTA--SLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDLFGT 703 (1578)
Q Consensus 637 ~d~y~iLgv~~~a--s~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~~ 703 (1578)
+|||++|||++++ |..+||++||+++++||||++++. .+.++|++|++||++|+||.+|+.||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4799999999998 999999999999999999998753 245799999999999999999999998644
No 169
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.15 E-value=4.4e-11 Score=111.73 Aligned_cols=82 Identities=16% Similarity=0.215 Sum_probs=73.2
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKM 954 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L 954 (1578)
..+|.||++||++|+++.|.++++++.+.+. +.+..||++++++++++|||.+ +||+++ +|+. .+.|..+.++|
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~-~Pt~~~--~G~~--~~~G~~~~~~l 76 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDK-IDVEKIDIMVDREKAIEYGLMA-VPAIAI--NGVV--RFVGAPSREEL 76 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSS-CCEEEECTTTCGGGGGGTCSSC-SSEEEE--TTTE--EEECSSCCHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCC-eEEEEEECCCCHHHHHhCCcee-eCEEEE--CCEE--EEccCCCHHHH
Confidence 3589999999999999999999999999864 9999999999999999999998 999998 8876 34487888999
Q ss_pred HHHHHhhC
Q psy12972 955 VEFFRLKL 962 (1578)
Q Consensus 955 ~~fi~~~l 962 (1578)
.+++.+.+
T Consensus 77 ~~~l~~~l 84 (85)
T 1nho_A 77 FEAINDEM 84 (85)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998764
No 170
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.14 E-value=6.8e-11 Score=138.86 Aligned_cols=71 Identities=13% Similarity=0.013 Sum_probs=51.1
Q ss_pred eEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 516 RVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+|||||++|.+|.++..... ...+...+...+.+++ +..+|..|++|+|+||+|||+. .++++|||....
T Consensus 136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~ 213 (332)
T 3qd2_B 136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA 213 (332)
T ss_dssp EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccc
Confidence 579999999999988743211 1122223344444444 7889999999999999999965 599999997643
No 171
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.14 E-value=3e-11 Score=124.03 Aligned_cols=102 Identities=20% Similarity=0.371 Sum_probs=83.9
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEEC----ccchhhHhHcCccccCC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHV----HNEQGLARRLGVGSQLP 931 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc----~~~~~L~~k~gV~~~~P 931 (1578)
+.++|...+.+. .+++++|.||++||++|+.+.|.+ .++++.+++ +.++.||+ +.+.+++++|+|.+ +|
T Consensus 18 ~~~~~~~~l~~~-~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~--~~~~~vd~~~~~~~~~~l~~~~~v~~-~P 93 (134)
T 2fwh_A 18 TVDELNQALVEA-KGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD--TVLLQANVTANDAQDVALLKHLNVLG-LP 93 (134)
T ss_dssp SHHHHHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT--SEEEEEECTTCCHHHHHHHHHTTCCS-SS
T ss_pred CHHHHHHHHHHh-cCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--cEEEEEeCCCCcchHHHHHHHcCCCC-CC
Confidence 445566555332 378999999999999999999999 999998874 89999999 56779999999998 99
Q ss_pred cEEEE-cCCccc--cccCCCCCHHHHHHHHHhhCCC
Q psy12972 932 QIALL-TDGRTS--FFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 932 Tl~lf-~~G~~~--~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+++| ++|+.+ ..+.|..+.++|.+++.+.-|.
T Consensus 94 t~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~~ 129 (134)
T 2fwh_A 94 TILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQPH 129 (134)
T ss_dssp EEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC---
T ss_pred EEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCcc
Confidence 99999 889886 5667999999999999876543
No 172
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.14 E-value=1.3e-10 Score=137.33 Aligned_cols=133 Identities=19% Similarity=0.256 Sum_probs=95.1
Q ss_pred CCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 407 DENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
..++||.|++|.||+|+.+ +|+.||||+....... ++.+
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~ 54 (325)
T 3kn6_A 15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEA----------------------------------------NTQK 54 (325)
T ss_dssp TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHH----------------------------------------HHHH
T ss_pred CCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhh----------------------------------------hHHH
Confidence 4579999999999999975 7999999998653221 1233
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
|.+.+.++. +++. +.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 55 e~~~l~~l~----~h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 128 (325)
T 3kn6_A 55 EITALKLCE----GHPNIVKLHEVFH-DQLHTFLVMELLNGGELFERIK-KKKHFSETEASYIMRKLVSAVSHMHDVGVV 128 (325)
T ss_dssp HHHHHHHTT----TCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhc----CCCCeeEEEEEEE-cCCEEEEEEEccCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 444444432 2333 33333332 2345689999999999988643 234577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 129 H~Dlkp~NIll~~~~~~~~~kl~Dfg~a~ 157 (325)
T 3kn6_A 129 HRDLKPENLLFTDENDNLEIKIIDFGFAR 157 (325)
T ss_dssp CCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred ecCCCHHHEEEecCCCcccEEEeccccce
Confidence 999999999973 58999999763
No 173
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.14 E-value=8.1e-11 Score=139.40 Aligned_cols=71 Identities=21% Similarity=0.067 Sum_probs=54.8
Q ss_pred CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH-HcCccccCCCCCCCCCC---------------
Q psy12972 513 SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF-QTGFVHADPHSGNDVNT--------------- 574 (1578)
Q Consensus 513 ~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~-~~G~vH~DpHPGNilv~--------------- 574 (1578)
...-+|||||++|.++.+. +....++...+...+.+++ +..+| ..|++|||+||+|||+.
T Consensus 134 ~~~~~lv~E~~~~g~ll~~--~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQ--MRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGG--GTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 3456899999998865443 2345677777777666666 78899 99999999999999953
Q ss_pred --------eeEEecCCchh
Q psy12972 575 --------WLYPVDLGDKF 585 (1578)
Q Consensus 575 --------~v~liDfG~~~ 585 (1578)
.++++|||...
T Consensus 212 ~~~~~~~~~vkL~DFG~a~ 230 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSR 230 (336)
T ss_dssp EEEECTTEEEEECCCTTCB
T ss_pred ccccCCCceEEEeeccccE
Confidence 68899999764
No 174
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.14 E-value=8.8e-11 Score=134.24 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+...... -++.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 57 (269)
T 4hcu_A 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 57 (269)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEEECTTSBCH--------------------------------------HHHHHHHH
T ss_pred heecCCCccEEEEEEecCCCeEEEEEecccccCH--------------------------------------HHHHHHHH
Confidence 6799999999999999899999999987543210 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.+++ +..-+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 58 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~di 132 (269)
T 4hcu_A 58 VMMKLS----HPKLVQLYGVC-LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132 (269)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhCC----CCCEeeEEEEE-ecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCc
Confidence 666653 22222222222 223456899999999999887543334477777766666655 88899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 133 kp~Nil~~~~~~~kl~Dfg~~~ 154 (269)
T 4hcu_A 133 AARNCLVGENQVIKVSDFGMTR 154 (269)
T ss_dssp CGGGEEECGGGCEEECCTTGGG
T ss_pred chheEEEcCCCCEEeccccccc
Confidence 99999975 59999999764
No 175
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.14 E-value=1.2e-11 Score=131.84 Aligned_cols=62 Identities=21% Similarity=0.490 Sum_probs=57.9
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCChh----HHHHHHHHHHHHHHcCCHHHHHhc
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDPT----AQEKFLQLTEAYNILSDAERRKQY 698 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~----a~~~f~~i~~Ay~~L~d~~~R~~y 698 (1578)
.|+|++|||++.++.++||+|||+++++|||||++... ++++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 59999999999999999999999999999999987533 789999999999999999999877
No 176
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.14 E-value=2.1e-10 Score=128.84 Aligned_cols=196 Identities=17% Similarity=0.255 Sum_probs=139.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcC
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD 938 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~ 938 (1578)
|.+++++.+ +.+++++|.||++| |..+.+.|.++|+.+. .+.|+. +.++++|++++|++ |+|++|++
T Consensus 16 s~~~~~~~l---~~~~v~vVgff~~~---~~~~~~~f~~~A~~l~--~~~F~~---t~~~~v~~~~~v~~--p~i~lfk~ 82 (227)
T 4f9z_D 16 DVPAAMEFI---AATEVAVIGFFQDL---EIPAVPILHSMVQKFP--GVSFGI---STDSEVLTHYNITG--NTICLFRL 82 (227)
T ss_dssp SHHHHHHHH---HTSSEEEEEECSCS---CSTHHHHHHHHTTTCT--TSEEEE---ECCHHHHHHTTCCS--SEEEEEET
T ss_pred CHHHHHHHH---hcCCeEEEEEecCC---CchhHHHHHHHHHhCC--CceEEE---ECCHHHHHHcCCCC--CeEEEEEe
Confidence 557888765 44789999999998 5678899999999994 488886 45789999999975 99999987
Q ss_pred Cc-c-ccccC---CCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCC-c--hH--HHHHHHHh
Q psy12972 939 GR-T-SFFKE---PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSL-P--VR--LRYLINAF 1008 (1578)
Q Consensus 939 G~-~-~~y~~---G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~-~--~~--~~~~~~a~ 1008 (1578)
+. . ..|.. |.++.++|.+||+.+..| ++..+|.+++..+.+.. ...++++|.+.. . .. -.+...|.
T Consensus 83 ~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p-lv~e~t~~n~~~~~~~~---~~~~~l~f~~~~~~~~~~~~~~~~~vAk 158 (227)
T 4f9z_D 83 VDNEQLNLEDEDIESIDATKLSRFIEINSLH-MVTEYNPVTVIGLFNSV---IQIHLLLIMNKASPEYEENMHRYQKAAK 158 (227)
T ss_dssp TTTEEEEECHHHHHTCCHHHHHHHHHHHCCC-SEEECCHHHHHHHHHSS---CCEEEEEEECTTSTTHHHHHHHHHHHHH
T ss_pred cCcccccccccccCCCCHHHHHHHHHHhCCC-ceeecCcccHHHHhccC---CceEEEEEEcCCcchHHHHHHHHHHHHH
Confidence 43 2 33332 479999999999888755 57788999998888663 344555563322 1 11 22223344
Q ss_pred hcCCCeEEEEEEcccCCChhHHhhcCCCC-CCcEEEEeccCCCCCccccccCCCCchhhhhhhhc
Q psy12972 1009 KHRTTIVFGVIVYDQEDSSSVFQRFKVPG-DKDSLLIFKEDKDRPSASITMNSIPVPTLQDITDN 1072 (1578)
Q Consensus 1009 ~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~-~~Ptllvfk~~~~~~~~~l~~~~l~~~~L~~fI~~ 1072 (1578)
.++.++.|++++.+......+++.||+.. ..|++++++...... .....++++...|.+|++.
T Consensus 159 ~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~k-y~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 159 LFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEW-DTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp HTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCE-EEETTCCCCHHHHHHHHHH
T ss_pred HhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCcc-ccCCcCCCCHHHHHHHHHH
Confidence 78888999999776555667889999973 578999996432211 1122356777888888764
No 177
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.13 E-value=1.1e-10 Score=133.28 Aligned_cols=134 Identities=17% Similarity=0.139 Sum_probs=98.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.++++.||||+.+++.... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 55 (268)
T 3sxs_A 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE--------------------------------------DEFFQEAQ 55 (268)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECBTTBCH--------------------------------------HHHHHHHH
T ss_pred eeeccCCCceEEEEEecCceeEEEEEeccCCCcH--------------------------------------HHHHHHHH
Confidence 6799999999999999999999999987542210 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+-.++ ......+|||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+
T Consensus 56 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di 130 (268)
T 3sxs_A 56 TMMKLS----HPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130 (268)
T ss_dssp HHHHCC----CTTBCCEEEEE-CSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSC
T ss_pred HHHhCC----CCCEeeEEEEE-ccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCc
Confidence 666653 22222222222 233456899999999999987654445578877777776666 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 131 kp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 131 AARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp SGGGEEECTTCCEEECCTTCEE
T ss_pred CcceEEECCCCCEEEccCccce
Confidence 99999964 59999999763
No 178
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.13 E-value=2.2e-11 Score=152.59 Aligned_cols=188 Identities=14% Similarity=0.169 Sum_probs=116.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeec---ccCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYD---LFGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~---~~~~~~~i~g~~~ 820 (1578)
..++..+|+..+.. ++++++|.||||||++|++++|.|+++|+.+++. .+..++|..+ .+|+..++.++
T Consensus 15 ~~Lt~~~f~~~v~~--~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~-- 90 (519)
T 3t58_A 15 TLLDADSVRPTVLG--SSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF-- 90 (519)
T ss_dssp EEECTTTHHHHHSS--CSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB--
T ss_pred EECChHHHHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc--
Confidence 35666788888754 5689999999999999999999999999999872 3344444222 15555555554
Q ss_pred ccccccccccCccccccccccc-c-----CccCcc---cceeE-----------------EEeeccccccceecccCCCC
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGFN-F-----PFEEHD---ISLFH-----------------KLSTTHWNFEKNYIPKSYTT 874 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~~-~-----~~~~~~---i~~~~-----------------vi~Lt~~nF~~~vl~~s~~~ 874 (1578)
||+.+|..+.. + ...+.+ +..+. ...++.+++++.+. ....+
T Consensus 91 -----------PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~l~-~~~~~ 158 (519)
T 3t58_A 91 -----------PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGFFT-RNKAD 158 (519)
T ss_dssp -----------SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTGGG-SCCCS
T ss_pred -----------CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHHhc-cCCCC
Confidence 88777774211 0 000100 00000 01234455555443 24456
Q ss_pred cEEEEEEcCCCcccccccHHHHHHHHHhCCC-ceEEEEEECccchhhHhHcCccccCCcEEEEcC-CccccccCCCCCHH
Q psy12972 875 PHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHVHNEQGLARRLGVGSQLPQIALLTD-GRTSFFKEPSFSVQ 952 (1578)
Q Consensus 875 ~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~-~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~-G~~~~y~~G~~s~~ 952 (1578)
+.++.|+... .+...+++..+... ++.+..|+- .+.+++++|||++ +|++++|.. |+........-...
T Consensus 159 ~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~-~~~~l~~kfgV~~-~Pslvl~~~nGk~~~~~v~~~~r~ 229 (519)
T 3t58_A 159 YLALVFERED-------SYLGREVTLDLSQYHAVAVRRVLN-TESDLVNKFGVTD-FPSCYLLLRNGSVSRVPVLVESRS 229 (519)
T ss_dssp EEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC-SSEEEEEETTSCEEECCCSSCSHH
T ss_pred eEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEecC-chHHHHHHcCCCC-CCeEEEEeCCCceeecccccccHH
Confidence 7777787654 34667777777643 377877654 4679999999997 999999954 54333222222334
Q ss_pred HHHHHHHh
Q psy12972 953 KMVEFFRL 960 (1578)
Q Consensus 953 ~L~~fi~~ 960 (1578)
.+..++++
T Consensus 230 ~~~~~l~~ 237 (519)
T 3t58_A 230 FYTSYLRG 237 (519)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 45566553
No 179
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.13 E-value=1.1e-10 Score=134.48 Aligned_cols=134 Identities=16% Similarity=0.122 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.++.... +-++.+|++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 71 (283)
T 3gen_A 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--------------------------------------EDEFIEEAK 71 (283)
T ss_dssp EECC---CEEEEEEEETTTEEEEEEEECTTSBC--------------------------------------HHHHHHHHH
T ss_pred hhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--------------------------------------HHHHHHHHH
Confidence 689999999999999999999999998754211 012455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 72 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~di 146 (283)
T 3gen_A 72 VMMNLS----HEKLVQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDL 146 (283)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred HHhcCC----CCCEeeEEEEE-ecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCC
Confidence 665543 22222222222 223456899999999999887543346688877777776665 88999999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
||.||++. .++++|||...
T Consensus 147 kp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 147 AARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp SGGGEEECTTSCEEECSTTGGG
T ss_pred ccceEEEcCCCCEEEccccccc
Confidence 99999964 59999999764
No 180
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.13 E-value=4.5e-11 Score=122.09 Aligned_cols=88 Identities=19% Similarity=0.470 Sum_probs=78.1
Q ss_pred CCCcEEEEEEcCCCcccccccHHHH--HHHHHhCCCceEEEEEEC---ccchhhHhHcCc---cccCCcEEEE-cCCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFK--KLMDELSPLGVGFFTVHV---HNEQGLARRLGV---GSQLPQIALL-TDGRTS 942 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~--~lA~~l~~~~v~~a~VDc---~~~~~L~~k~gV---~~~~PTl~lf-~~G~~~ 942 (1578)
.+++++|.||++||++|+.+.|.++ +++..+.+. +.++.||+ +.+.+++++|+| .+ +||+++| ++|+..
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~-~~~~~vd~~~~~~~~~l~~~~~v~~~~~-~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKH-FEVVKIDVGNFDRNLELSQAYGDPIQDG-IPAVVVVNSDGKVR 105 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHH-CEEEEEECTTTTSSHHHHHHTTCGGGGC-SSEEEEECTTSCEE
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCC-EEEEEEeCCcccchHHHHHHhCCccCCc-cceEEEECCCCCEE
Confidence 4789999999999999999999999 999988653 99999999 889999999999 98 9999999 899887
Q ss_pred cccCC-------CCCHHHHHHHHHhh
Q psy12972 943 FFKEP-------SFSVQKMVEFFRLK 961 (1578)
Q Consensus 943 ~y~~G-------~~s~~~L~~fi~~~ 961 (1578)
....| ..+.+++.+|+++.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHh
Confidence 66666 57888898888753
No 181
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=135.62 Aligned_cols=161 Identities=15% Similarity=0.048 Sum_probs=97.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.++.....-. + +.....+. ............-...-++.+|+
T Consensus 19 ~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~E~ 87 (298)
T 2zv2_A 19 DEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQA-G---------FPRRPPPR-GTRPAPGGCIQPRGPIEQVYQEI 87 (298)
T ss_dssp EEEEC--CCEEEEEEETTTTEEEEEEEEECC------------------------------------------CHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhc-c---------cccccccc-cccccccccccccchHHHHHHHH
Confidence 68999999999999964 7999999998765321100 0 00000000 00000000000001112467777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +..-+.+-.++.+- ...-+|||||++|.++.++. ....++...+...+.+++ +..+|..|++|+
T Consensus 88 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 161 (298)
T 2zv2_A 88 AILKKLD----HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP--TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHR 161 (298)
T ss_dssp HHHHTCC----CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS--CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhCC----CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 7776653 33334444554432 23458999999999998863 345677777766666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 162 Dlkp~Nil~~~~~~~kl~Dfg~~~~ 186 (298)
T 2zv2_A 162 DIKPSNLLVGEDGHIKIADFGVSNE 186 (298)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEE
T ss_pred CCCHHHEEECCCCCEEEecCCCccc
Confidence 9999999964 599999997643
No 182
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.12 E-value=2e-10 Score=136.24 Aligned_cols=138 Identities=19% Similarity=0.145 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .+ . -.+.+|+
T Consensus 21 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~--~~---------------------------~------~~~~~E~ 65 (328)
T 3fe3_A 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNP--TS---------------------------L------QKLFREV 65 (328)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------H------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCH--HH---------------------------H------HHHHHHH
Confidence 6899999999999996 589999999986432110 00 0 1134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ .-....+|||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 66 ~~l~~l~----hpnIv~l~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrD 139 (328)
T 3fe3_A 66 RIMKILN----HPNIVKLFEVI-ETEKTLYLIMEYASGGEVFDYLV-AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRD 139 (328)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhCC----CCCEeeEEEEE-EECCEEEEEEECCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccC
Confidence 6665543 32223333333 22345689999999999988643 335677776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~l 587 (1578)
+||+|||+. .++++|||....+
T Consensus 140 lkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 140 LKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp CCGGGEEECTTSCEEECSTTCCGGG
T ss_pred CCHHHEEEcCCCCEEEeeccCceec
Confidence 999999964 5999999977543
No 183
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.12 E-value=7.5e-11 Score=150.33 Aligned_cols=149 Identities=17% Similarity=0.107 Sum_probs=95.5
Q ss_pred CChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
..+++ |.-. +.||.||+|.||+|+.+ +|+.||||+.....-.. .+ .
T Consensus 186 ~sldd-f~i~--k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~--~~------------------~---------- 232 (689)
T 3v5w_A 186 LTMND-FSVH--RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKM--KQ------------------G---------- 232 (689)
T ss_dssp CCGGG-EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C----------
T ss_pred CchHH-eEEE--EEEecccCeEEEEEEECCCCCEEEEEEEeHHHcch--hh------------------h----------
Confidence 34444 4444 68999999999999975 79999999986431100 00 0
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
+--...|..-+. +.... ++|. |.+=..+.+ ...-+|||||++|+.|.+... ....++...+...+.+++
T Consensus 233 ----~~~~~~E~~~l~-ll~~~-~HP~IV~l~~~f~~-~~~lylVmEy~~GGdL~~~l~-~~~~l~E~~a~~y~~qIl~a 304 (689)
T 3v5w_A 233 ----ETLALNERIMLS-LVSTG-DCPFIVCMSYAFHT-PDKLSFILDLMNGGDLHYHLS-QHGVFSEADMRFYAAEIILG 304 (689)
T ss_dssp ----HHHHHHHHHHHH-HHSSS-CCTTBCCEEEEEEC-SSEEEEEECCCCSCBHHHHHH-HHCCCCHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHH-HHhhC-CCCCEeEEEEEEEE-CCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 000111211111 11112 2333 333333321 234579999999999988743 334577766666666655
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++.+|..|++|||+||.|||+. .++++|||.+..
T Consensus 305 L~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp HHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred HHHHHHCCccccCCchHHeEEeCCCCEEecccceeee
Confidence 8899999999999999999964 699999998643
No 184
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.12 E-value=1e-10 Score=138.26 Aligned_cols=136 Identities=18% Similarity=0.198 Sum_probs=96.3
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. .+..||||+.+.+..... .-+|.
T Consensus 55 ~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~ 98 (325)
T 3kul_A 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ------------------------------------RRDFL 98 (325)
T ss_dssp EEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHH------------------------------------HHHHH
T ss_pred eEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHH------------------------------------HHHHH
Confidence 68999999999999975 345699999875432210 11345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++ ......+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 99 ~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 173 (325)
T 3kul_A 99 SEASIMGQFD----HPNIIRLEGVV-TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173 (325)
T ss_dssp HHHHHHTTCC----CTTBCCEEEEE-CGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC----CCCCCcEEEEE-EeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 6666665542 22222222222 223446899999999999887543445677777777766665 7899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 174 H~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 174 HRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CCCCCcceEEECCCCCEEECCCCccc
Confidence 999999999965 58999999764
No 185
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.12 E-value=1.2e-11 Score=117.57 Aligned_cols=55 Identities=20% Similarity=0.439 Sum_probs=50.4
Q ss_pred CCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh----hHHHHHHHHHHHHHHcCC
Q psy12972 637 LDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP----TAQEKFLQLTEAYNILSD 691 (1578)
Q Consensus 637 ~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~a~~~f~~i~~Ay~~L~d 691 (1578)
.++|++|||++.||.++||+|||+++++|||||+++. .|+++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5889999999999999999999999999999998753 378899999999999964
No 186
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.11 E-value=4e-10 Score=135.81 Aligned_cols=137 Identities=18% Similarity=0.160 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|+||+|+.. +|+.||||+.+...... + .
T Consensus 87 ~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 130 (370)
T 2psq_A 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 130 (370)
T ss_dssp EEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHH---H---------------------------------H
T ss_pred eEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHH---H---------------------------------H
Confidence 68999999999999852 46789999987643211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADV 544 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v 544 (1578)
-++.+|++.+.++. .++. +.+-..+ .....-+|||||++|.+|.++..-.. ..++..++
T Consensus 131 ~~~~~E~~~l~~l~----~hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (370)
T 2psq_A 131 SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205 (370)
T ss_dssp HHHHHHHHHHHHSC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHH
T ss_pred HHHHHHHHHHHHhc----CCCCEeeEEEEE-ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHH
Confidence 12456666666652 2332 2332222 22345689999999999988743211 23566666
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|+||.|||+. .++++|||....
T Consensus 206 ~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 252 (370)
T 2psq_A 206 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 252 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred HHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcc
Confidence 66666655 7889999999999999999974 599999997643
No 187
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.10 E-value=1.1e-10 Score=141.00 Aligned_cols=137 Identities=19% Similarity=0.232 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+.+.... ..-+|.
T Consensus 51 ~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~ 94 (373)
T 2qol_A 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK------------------------------------QRRDFL 94 (373)
T ss_dssp EEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHH------------------------------------HHHHHH
T ss_pred eEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHH------------------------------------HHHHHH
Confidence 68999999999999975 67889999987643211 012356
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.++ ......+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 95 ~E~~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 169 (373)
T 2qol_A 95 GEASIMGQF----DHPNIIRLEGVV-TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169 (373)
T ss_dssp HHHHHHTTC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCCCeEEEEE-eeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 666666554 233223333333 223456899999999999887543334577777777666665 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 170 H~Dlkp~NIll~~~~~~kl~Dfg~a~~ 196 (373)
T 2qol_A 170 HRDLAARNILINSNLVCKVSDFGLGRV 196 (373)
T ss_dssp CSCCCGGGEEECTTCCEEECCC-----
T ss_pred CCCCCcceEEEcCCCCEEECcCccccc
Confidence 999999999975 589999997643
No 188
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.10 E-value=2.7e-11 Score=133.23 Aligned_cols=66 Identities=20% Similarity=0.286 Sum_probs=59.3
Q ss_pred ccCCCccccccccc--CCHHHHHHHhhhhhhhcCCCCCCCh------hHHHHHHHHHHHHHHcCCHHHHHhccc
Q psy12972 635 VSLDPYETLGVPRT--ASLQEIRKNYKRLVVEWHPDKNNDP------TAQEKFLQLTEAYNILSDAERRKQYDL 700 (1578)
Q Consensus 635 ~~~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~------~a~~~f~~i~~Ay~~L~d~~~R~~yD~ 700 (1578)
...|||++|||+++ +|.++||++||+|+++|||||+++. .+.++|++|++||++|+||.+|+.||.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 46799999999986 7899999999999999999998742 256789999999999999999999995
No 189
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.10 E-value=1e-10 Score=141.25 Aligned_cols=136 Identities=19% Similarity=0.155 Sum_probs=98.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++..... ..-+|.+|+
T Consensus 120 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 163 (377)
T 3cbl_A 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD------------------------------------LKAKFLQEA 163 (377)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHH------------------------------------HHTTTTHHH
T ss_pred eEeccCCCCeEEEEEEecCCeEEEEEEccccCCHH------------------------------------HHHHHHHHH
Confidence 68999999999999986 89999999987543211 011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ .....-+|||||++|.+|.+...-....++...+...+.++. +..+|..|++|+|
T Consensus 164 ~~l~~l~----hpniv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 238 (377)
T 3cbl_A 164 RILKQYS----HPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238 (377)
T ss_dssp HHHTTCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCEEEEEEEE-ecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcc
Confidence 6665542 32223333333 223456899999999999887554444577777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 239 lkp~Nil~~~~~~~kl~DfG~s~ 261 (377)
T 3cbl_A 239 LAARNCLVTEKNVLKISDFGMSR 261 (377)
T ss_dssp CSGGGEEECTTCCEEECCGGGCE
T ss_pred cCHHHEEEcCCCcEEECcCCCce
Confidence 999999965 59999999753
No 190
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.08 E-value=2.9e-11 Score=118.78 Aligned_cols=57 Identities=23% Similarity=0.259 Sum_probs=51.1
Q ss_pred cCCCcccccccccCCHHHHHHHhhhhhhhcCCCCCCCh--------hHHHHHHHHHHHHHHcCCHH
Q psy12972 636 SLDPYETLGVPRTASLQEIRKNYKRLVVEWHPDKNNDP--------TAQEKFLQLTEAYNILSDAE 693 (1578)
Q Consensus 636 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--------~a~~~f~~i~~Ay~~L~d~~ 693 (1578)
..|+|++||++. ||.++||+|||+++++|||||++++ .|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 9999999999999999999997631 36889999999999999974
No 191
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.08 E-value=4e-10 Score=135.05 Aligned_cols=137 Identities=18% Similarity=0.111 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .-.+..|.
T Consensus 29 ~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~-~~---------------------------------~~~~~~E~ 74 (353)
T 3txo_A 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD-DD---------------------------------VECTMTEK 74 (353)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHH-TT---------------------------------HHHHHHHH
T ss_pred EEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcch-hH---------------------------------HHHHHHHH
Confidence 68999999999999975 799999999875421100 00 00123444
Q ss_pred HHHHHHHHhhCCCCCe-eecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYV-YIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v-~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++.| .+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++||
T Consensus 75 ~il~~~~----~hp~Iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 148 (353)
T 3txo_A 75 RILSLAR----NHPFLTQLFCCF-QTPDRLFFVMEFVNGGDLMFHIQ-KSRRFDEARARFYAAEIISALMFLHDKGIIYR 148 (353)
T ss_dssp HHHHHTT----TCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhcc----CCCceeeEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 4444432 33432 222222 22345689999999999987643 335677776666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 149 Dlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 149 DLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCCHHHEEECCCCCEEEcccccee
Confidence 9999999964 59999999753
No 192
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.07 E-value=2.2e-10 Score=134.62 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.++|+.||||+..+.-.... -.+.+|++
T Consensus 45 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~E~~ 87 (321)
T 2qkw_B 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGI-------------------------------------EEFETEIE 87 (321)
T ss_dssp CCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHH-------------------------------------HHHHHHHH
T ss_pred ceeecCCCeeEEEEEECCCCEEEEEEecccChHHH-------------------------------------HHHHHHHH
Confidence 57999999999999998999999998776422110 02345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
.+.++ .+..-+.+-..+ ......+|||||++|.+|.+...-. ...++...+...+.+++ +..+|..|++|
T Consensus 88 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH 162 (321)
T 2qkw_B 88 TLSFC----RHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162 (321)
T ss_dssp GGGSC----CCTTBCCEEEEC-CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHhC----CCCCEeeEEEEE-cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeec
Confidence 54433 222222222222 2335568999999999998874311 12366666666666655 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 163 ~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 163 RDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp SCCCSTTEEECTTCCEEECCCTTCE
T ss_pred CCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999965 58999999753
No 193
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.07 E-value=2.3e-10 Score=133.01 Aligned_cols=149 Identities=19% Similarity=0.223 Sum_probs=100.7
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
|.-+.+-|.-. +.||.|++|+||+|+.. +|+.||||+........ .+..
T Consensus 6 g~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~ 55 (294)
T 4eqm_A 6 GKIINERYKIV--DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK----------------------------EETL 55 (294)
T ss_dssp SSCEETTEEEE--EEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC----------------------------HHHH
T ss_pred hhHhhccEEEE--EEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc----------------------------HHHH
Confidence 44445555555 68999999999999964 79999999875432110 0000
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.|.+|++.+.++. +..-+.+-.++ +.....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 56 ------~~~~~e~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~ 123 (294)
T 4eqm_A 56 ------KRFEREVHNSSQLS----HQNIVSMIDVD-EEDDCYYLVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDG 123 (294)
T ss_dssp ------HHHHHHHHHHTTCC----BTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHhcCC----CCCCceEEEee-eeCCeEEEEEeCCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHH
Confidence 12456666665543 22222222222 22345689999999999988743 234577777776666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|+||.|||+. .++++|||....
T Consensus 124 l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 160 (294)
T 4eqm_A 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKA 160 (294)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTT
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccc
Confidence 7899999999999999999964 599999997643
No 194
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.07 E-value=1.1e-10 Score=118.04 Aligned_cols=101 Identities=16% Similarity=0.281 Sum_probs=84.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcC-------CCcccccccHHHHHHHHHhCCCceEEEEEEC-------ccchhhH
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSD-------WCFACLQVEPIFKKLMDELSPLGVGFFTVHV-------HNEQGLA 921 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~Fyap-------wCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-------~~~~~L~ 921 (1578)
...+.++|.+.+... .+++++|.|||+ ||++|+.+.|.++++++.+.+. +.|+.||+ +.+..++
T Consensus 8 ~~~~~~~~~~~~~~~-~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 8 SVSGFEEFHRAVEQH-NGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEG-CVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEESHHHHHHHHHTT-TTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTT-EEEEEEECCCHHHHHCTTCHHH
T ss_pred EeccHHHHHHHHHHh-CCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCC-cEEEEEECCCchhhhchhHHHH
Confidence 346778888877542 378999999999 9999999999999999998764 99999999 7888999
Q ss_pred hHcCccccCCcEEEEcCCccccccCCCCCHHHHHHHHHh
Q psy12972 922 RRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVEFFRL 960 (1578)
Q Consensus 922 ~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~fi~~ 960 (1578)
++|+|.+ +||+++|.+|.......| .+.+.|.+|+.+
T Consensus 86 ~~~~i~~-~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLKVTA-VPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHCCCS-SSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHCCCCe-eCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 9999998 999999988766554434 567888888864
No 195
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.07 E-value=3.2e-10 Score=132.51 Aligned_cols=135 Identities=15% Similarity=0.139 Sum_probs=96.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+....-.. ..-.|.+|+
T Consensus 16 ~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~-------------------------------------~~~~~~~E~ 58 (310)
T 3s95_A 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEE-------------------------------------TQRTFLKEV 58 (310)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEESCCCHH-------------------------------------HHHHHHHHH
T ss_pred ceecCCCCEEEEEEEECCCCcEEEEEEeccCCHH-------------------------------------HHHHHHHHH
Confidence 67999999999999975 7999999987542111 011345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. .....+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|
T Consensus 59 ~~l~~l~----hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~d 133 (310)
T 3s95_A 59 KVMRCLE----HPNVLKFIGVLY-KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133 (310)
T ss_dssp HHHTTCC----CTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CcCcccEEEEEe-cCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 6665542 322233333332 23456799999999999987543345677777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 lkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 134 LNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp CSTTSEEECTTSCEEECCCTTCE
T ss_pred CCcCeEEECCCCCEEEeecccce
Confidence 999999965 58999999763
No 196
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.07 E-value=9.8e-11 Score=120.25 Aligned_cols=101 Identities=11% Similarity=0.104 Sum_probs=87.7
Q ss_pred EeeccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccc-cCCcEE
Q psy12972 856 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGS-QLPQIA 934 (1578)
Q Consensus 856 i~Lt~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~-~~PTl~ 934 (1578)
.++|.+||.+.+ +...+++|.|||+ |++|+.+.|.++++|+++++. +.|++||.++++.+++.|||++ ..||++
T Consensus 9 ~~~t~~~f~~~~---~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~~~~~a~~~gi~~~~iPtl~ 83 (133)
T 2djk_A 9 GEIGPETYSDYM---SAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFA 83 (133)
T ss_dssp EECCHHHHHHHH---HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTTTGGGTTTTTCCSSSSSEEE
T ss_pred eccChHHHHHHh---cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHHhHHHHHHcCCCcccCCEEE
Confidence 467899998764 4478999999999 899999999999999999887 9999999999999999999983 289999
Q ss_pred EEcC--CccccccC--CCCCHHHHHHHHHhhC
Q psy12972 935 LLTD--GRTSFFKE--PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 935 lf~~--G~~~~y~~--G~~s~~~L~~fi~~~l 962 (1578)
+|++ |+.. ... |..+.+.|.+|+.+.+
T Consensus 84 i~~~~~g~~~-~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 84 IQEVAKNQKF-PFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp EECTTTCCBC-CCCSSSCCCHHHHHHHHHHHH
T ss_pred EEecCcCccc-CCCCccccCHHHHHHHHHHHH
Confidence 9987 6663 333 8899999999998766
No 197
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.06 E-value=4.5e-10 Score=130.92 Aligned_cols=133 Identities=16% Similarity=0.132 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... . -.+.+|+
T Consensus 26 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------~--------------~~~~~E~ 68 (297)
T 3fxz_A 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-----------------------K--------------ELIINEI 68 (297)
T ss_dssp EEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-----------------------H--------------HHHHHHH
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEeecccccH-----------------------H--------------HHHHHHH
Confidence 6799999999999995 589999999986432111 0 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+-..+. .....+|||||++|.+|.++ +...+++...+...+.+++ +..+|..|++|+|
T Consensus 69 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~D 141 (297)
T 3fxz_A 69 LVMREN----KNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDV--VTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141 (297)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHH--HHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHhcC----CCCCCCeEeEEEE-ECCEEEEEEECCCCCCHHHH--HhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCC
Confidence 555443 2322233323322 23456899999999999887 3456788777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 lkp~Nil~~~~~~~kl~Dfg~~~ 164 (297)
T 3fxz_A 142 IKSDNILLGMDGSVKLTDFGFCA 164 (297)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred CCHHHEEECCCCCEEEeeCCCce
Confidence 999999964 69999999753
No 198
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.06 E-value=2.3e-10 Score=135.21 Aligned_cols=132 Identities=16% Similarity=0.147 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-.. -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 55 (330)
T 2izr_A 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---------------------------------------PQLHLEY 55 (330)
T ss_dssp EECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---------------------------------------CCHHHHH
T ss_pred EEeeccCCceEEEEEECCCCcEEEEEEeccccch---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999987532110 0245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++. +++. +++++. ......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 56 ~~l~~l~----~h~~--i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiH 128 (330)
T 2izr_A 56 RFYKQLG----SGDG--IPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIY 128 (330)
T ss_dssp HHHHHHC----SCTT--SCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHhh----CCCC--CCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 6666663 2232 223322 2234568999999 9999987654456788887777777766 88999999999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~~ 586 (1578)
+|++|.|||+. . ++++|||....
T Consensus 129 rDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 129 RDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp CCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred cCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 99999999965 2 89999997643
No 199
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.05 E-value=4.2e-10 Score=128.09 Aligned_cols=134 Identities=17% Similarity=0.107 Sum_probs=97.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+.++..... -++.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~--------------------------------------~~~~~e~~ 55 (267)
T 3t9t_A 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE--------------------------------------EDFIEEAE 55 (267)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTTBCH--------------------------------------HHHHHHHH
T ss_pred eEecCCCceeEEEEEecCCCeEEEEEccccCCCH--------------------------------------HHHHHHHH
Confidence 6799999999999999899999999987543210 12455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +..-+.+-.++ ......++||||++|.+|.++.......++...+...+.+++ +..+|..|++|+|+
T Consensus 56 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl 130 (267)
T 3t9t_A 56 VMMKLS----HPKLVQLYGVC-LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130 (267)
T ss_dssp HHHTCC----CTTBCCEEEEE-CSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred HHHhCC----CCCEeeEEEEE-ccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 665542 22222322332 223456899999999999887543334477777776666665 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 131 ~p~Nili~~~~~~kl~dfg~~~ 152 (267)
T 3t9t_A 131 AARNCLVGENQVIKVSDFGMTR 152 (267)
T ss_dssp CGGGEEECGGGCEEECCTTGGG
T ss_pred chheEEECCCCCEEEccccccc
Confidence 99999975 58999999764
No 200
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.05 E-value=3.7e-10 Score=133.59 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..-+
T Consensus 53 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 96 (343)
T 1luf_A 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD------------------------------------MQAD 96 (343)
T ss_dssp EEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHH------------------------------------HHHH
T ss_pred eeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHH------------------------------------HHHH
Confidence 67999999999999974 45899999987543211 0113
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------------------cCC
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------------------KGF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~ 539 (1578)
|.+|++.+.++. +..-+.+-.++ ......+|||||++|.+|.++..-.. ..+
T Consensus 97 ~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 97 FQREAALMAEFD----NPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHTCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHhCC----CCCEEEEEEEE-ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 456776666652 32223333333 22455689999999999988743211 346
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 224 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCccc
Confidence 6666666666655 7889999999999999999975 5999999987544
No 201
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.05 E-value=3.5e-10 Score=132.67 Aligned_cols=145 Identities=15% Similarity=0.190 Sum_probs=95.2
Q ss_pred ChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
.+.+-|... +.||.|++|.||+|+..+|+.||||+.+...... ..
T Consensus 18 ~l~~~y~~~--~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~---- 62 (311)
T 3niz_A 18 GLMEKYQKL--EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDE-----------------------------GI---- 62 (311)
T ss_dssp CSSCEEEEE--EEEEECSSCEEEEEEETTSCEEEEEEEC-----------------------------------CH----
T ss_pred chHhhhHhh--hhccCCCCeEEEEEEECCCCEEEEEEEecccccc-----------------------------hh----
Confidence 334444444 6899999999999999899999999986432110 00
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-.+.+|++.+.++. +..-+.+-.++ .....-+|||||++| .+.+.......+++...+...+.+++ +..
T Consensus 63 --~~~~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 134 (311)
T 3niz_A 63 --PSTAIREISLLKELH----HPNIVSLIDVI-HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH 134 (311)
T ss_dssp --HHHHHHHHHHHHHCC----CTTBCCEEEEE-CCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHcC----CCCEeeeeeEE-ccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 012345666665552 32223332333 223445899999987 44444322234577777766666655 788
Q ss_pred HHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 135 LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 167 (311)
T 3niz_A 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167 (311)
T ss_dssp HHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred HHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence 9999999999999999964 58999999764
No 202
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.05 E-value=4e-10 Score=129.20 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+....... .+.++.+|.
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~e~ 61 (289)
T 1x8b_A 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-----------------------------------DEQNALREV 61 (289)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-----------------------------------HHHHHHHHH
T ss_pred hhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-----------------------------------HHHHHHHHH
Confidence 68999999999999976 899999999875432210 112234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
..+.++. .+..-+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|++
T Consensus 62 ~~~~~l~---~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~iv 137 (289)
T 1x8b_A 62 YAHAVLG---QHSHVVRYFSAW-AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137 (289)
T ss_dssp HHHHHSC---SCTTBCCEEEEE-EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhC---CCCCeeeeeeee-ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 4444431 222223333332 22345689999999999998754221 4467777766666665 7889999999
Q ss_pred ccCCCCCCCCCC----------------------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT----------------------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~----------------------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 138 H~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 182 (289)
T 1x8b_A 138 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182 (289)
T ss_dssp CSCCSGGGEEEC--------------------CCCEEECCCTTCE
T ss_pred ecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccccccc
Confidence 999999999975 47888888653
No 203
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.05 E-value=6.4e-11 Score=150.72 Aligned_cols=140 Identities=16% Similarity=0.120 Sum_probs=89.1
Q ss_pred ccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 410 PIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 410 PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
-..+++-|+++.++. ..|+.||||+......... .+-.. .+ ..--+|++|++
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~--------------------~~~~~-----~~--~~~~~~~~E~~ 293 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGI--------------------LTAEE-----SQ--RNKYELHNEIK 293 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTC--------------------SCHHH-----HH--HHHHHHHHHHH
T ss_pred ccccCCcccccccccccccceeEEEEEeccccccc--------------------chhhh-----hH--HHHHHHHHHHH
Confidence 456777787777763 4799999999875432111 00000 00 01124677887
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH~Dp 566 (1578)
-++++.. ...||+++..+ ...-+||||||+|.+|.++.. ....++..+++..++++ ++.+|..|+||||+
T Consensus 294 ~l~~~~~------~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~-~~~~l~~~~I~~QIl~A-L~ylH~~GIIHRDI 365 (569)
T 4azs_A 294 FLTQPPA------GFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLA-AGEEIDREKILGSLLRS-LAALEKQGFWHDDV 365 (569)
T ss_dssp HHHSCCT------TCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHH-TTCCCCHHHHHHHHHHH-HHHHHHTTCEESCC
T ss_pred HHHhcCC------CCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHH-hCCCCCHHHHHHHHHHH-HHHHHHCCceeccC
Confidence 7776632 24577776543 345689999999999999753 33456777777666654 78999999999999
Q ss_pred CCCCCCCC---eeEEecCCch
Q psy12972 567 HSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~ 584 (1578)
||+|||++ .++++|||..
T Consensus 366 KPeNILL~~dg~vKL~DFGlA 386 (569)
T 4azs_A 366 RPWNVMVDARQHARLIDFGSI 386 (569)
T ss_dssp CGGGEEECTTSCEEECCCTTE
T ss_pred chHhEEECCCCCEEEeecccC
Confidence 99999964 5888888865
No 204
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.05 E-value=3.8e-11 Score=129.30 Aligned_cols=69 Identities=32% Similarity=0.463 Sum_probs=61.2
Q ss_pred hccccCCCcccc------cccc-cCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHHHhccccC
Q psy12972 632 NCAVSLDPYETL------GVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERRKQYDLFG 702 (1578)
Q Consensus 632 ~~~~~~d~y~iL------gv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~~ 702 (1578)
......|||++| |+++ ++|.++||++||++++++|||+++. +.++|++|++||++|+||.+|+.||...
T Consensus 6 ~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 6 QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp -CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 355678999999 4655 8999999999999999999999875 6789999999999999999999999843
No 205
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=1.6e-11 Score=112.15 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=51.3
Q ss_pred ccCCCcccccccc-cCCHHHHHHHhhhhhhhcCCCCCCChhHHHHHHHHHHHHHHcCCHHHH
Q psy12972 635 VSLDPYETLGVPR-TASLQEIRKNYKRLVVEWHPDKNNDPTAQEKFLQLTEAYNILSDAERR 695 (1578)
Q Consensus 635 ~~~d~y~iLgv~~-~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R 695 (1578)
...++|++|||++ ++|.++||++||++++++|||++++ .++|++|++||++|+|+..|
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 3458899999998 7999999999999999999999754 56999999999999987543
No 206
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.05 E-value=3.5e-10 Score=131.33 Aligned_cols=137 Identities=15% Similarity=0.056 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~ 70 (302)
T 4e5w_A 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH------------------------------------IADL 70 (302)
T ss_dssp EEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CC------------------------------------HHHH
T ss_pred hccCCCCceEEEEEEEccccCccCeEEEEEEecccccchh------------------------------------HHHH
Confidence 6799999999999983 4799999999876432110 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++.+-. ..-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 71 ~~E~~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 146 (302)
T 4e5w_A 71 KKEIEILRNLY----HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146 (302)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 45665555542 333233333333221 335799999999999988644445677777777666665 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 147 YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cccCCCchheEEEcCCCCEEECcccccc
Confidence 99999999999964 59999999764
No 207
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.05 E-value=3.6e-10 Score=130.63 Aligned_cols=134 Identities=19% Similarity=0.231 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... -++.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 3uzp_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---------------------------------------CHHHHHH
T ss_pred EEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---------------------------------------hHHHHHH
Confidence 6899999999999996 58999999987543211 0235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++.+ .+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~~----~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d 130 (296)
T 3uzp_A 56 KIYKMMQG----GVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD 130 (296)
T ss_dssp HHHHHHTT----STTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHhhc----CCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCC
Confidence 66666542 222222233333344568999999 8899887654455688877777666666 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 131 lkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 131 VKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999999973 489999997643
No 208
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.05 E-value=9.1e-10 Score=131.41 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ .+ .+..|.
T Consensus 15 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~---------------------------~~------~~~~E~ 60 (345)
T 3a8x_A 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-ED---------------------------ID------WVQTEK 60 (345)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-HH---------------------------HH------HHHHHH
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-HH---------------------------HH------HHHHHH
Confidence 67999999999999976 799999999875432100 00 00 123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+++. +.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 61 ~~l~~~----~~hp~iv~l~~~~-~~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHr 134 (345)
T 3a8x_A 61 HVFEQA----SNHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 134 (345)
T ss_dssp HHHHHT----TTCTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc----CCCCccCeEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 444333 12333 2222232 22345689999999999987643 234577766666655555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 135 Dlkp~NIll~~~g~~kL~DFG~a~ 158 (345)
T 3a8x_A 135 DLKLDNVLLDSEGHIKLTDYGMCK 158 (345)
T ss_dssp CCCGGGEEECTTSCEEECCGGGCB
T ss_pred CCCHHHEEECCCCCEEEEeccccc
Confidence 9999999964 59999999764
No 209
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.04 E-value=5.1e-10 Score=132.37 Aligned_cols=139 Identities=17% Similarity=0.088 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+. .+|+.||||+.+......-. ...-.+.
T Consensus 23 ~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------~~~~~~~ 69 (327)
T 3a62_A 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA---------------------------------KDTAHTK 69 (327)
T ss_dssp EEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC----------------------------------------------
T ss_pred EEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhh---------------------------------hHHHHHH
Confidence 6899999999999997 47999999998754211000 0011234
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +...+.+-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 70 ~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 143 (327)
T 3a62_A 70 AERNILEEVK----HPFIVDLIYAF-QTGGKLYLILEYLSGGELFMQLE-REGIFMEDTACFYLAEISMALGHLHQKGII 143 (327)
T ss_dssp -HHHHHHHCC----CTTBCCEEEEE-ECSSCEEEEEECCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCccceeEEE-EcCCEEEEEEeCCCCCcHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5555555542 22222222232 22455689999999999987643 234466666666555555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 144 H~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 144 YRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred cccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999964 699999997643
No 210
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.04 E-value=6.8e-10 Score=130.35 Aligned_cols=137 Identities=20% Similarity=0.133 Sum_probs=95.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . .-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~~~~E~ 58 (319)
T 4euu_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P---------------------------------VDVQMREF 58 (319)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C---------------------------------HHHHHHHH
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEeccccccc---h---------------------------------HHHHHHHH
Confidence 57999999999999976 69999999986432110 0 00124566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhhc--CCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLEK--GFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~~--~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.+++ +...+.+-.++.+... ..+|||||++|.+|.++..-... +++...+...+.+++ +..+|..|++
T Consensus 59 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~iv 134 (319)
T 4euu_A 59 EVLKKLN----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134 (319)
T ss_dssp HHHHHCC----CTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHhcC----CCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 6665553 3333333334333322 45899999999999887542222 277777777766666 7889999999
Q ss_pred ccCCCCCCCCC----C---eeEEecCCchh
Q psy12972 563 HADPHSGNDVN----T---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv----~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+ . .++++|||...
T Consensus 135 H~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp CSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred cCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999996 3 38899999764
No 211
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.04 E-value=3.9e-10 Score=133.19 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=93.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-... .+-.+.+|+
T Consensus 13 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 56 (323)
T 3tki_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD------------------------------------CPENIKKEI 56 (323)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECC-------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc------------------------------------hHHHHHHHH
Confidence 67999999999999976 89999999985432110 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++. +...+.+-..+ ...+..+|||||++|.+|.+... ...+++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~D 130 (323)
T 3tki_A 57 CINKMLN----HENVVKFYGHR-REGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130 (323)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCCCeEEEEE-ecCCeEEEEEEcCCCCcHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 5555542 32223332332 23345689999999999988743 233577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||+|||+. .++++|||...
T Consensus 131 lkp~NIll~~~~~~kl~Dfg~a~ 153 (323)
T 3tki_A 131 IKPENLLLDERDNLKISDFGLAT 153 (323)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred cchHHEEEeCCCCEEEEEeeccc
Confidence 999999964 59999999764
No 212
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.04 E-value=3.6e-10 Score=139.95 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=99.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 190 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 231 (452)
T 1fmk_A 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 231 (452)
T ss_dssp EEEEECSSCEEEEEEETTTEEEEEEECCTTSSC--------------------------------------HHHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCceEEEEEeccCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999988889999998764211 013567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +...+.+-.++.+ ...+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 232 ~l~~l~----hp~iv~~~~~~~~--~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD 305 (452)
T 1fmk_A 232 VMKKLR----HEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 305 (452)
T ss_dssp HHHHCC----CTTBCCEEEEECS--SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----CCCEeeEEEEEcC--CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 777663 3333444344432 4568999999999999875422 23477777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 306 lkp~Nill~~~~~~kl~DfG~a~~ 329 (452)
T 1fmk_A 306 LRAANILVGENLVCKVADFGLARL 329 (452)
T ss_dssp CSGGGEEECGGGCEEECCCCTTC-
T ss_pred CChhhEEECCCCCEEECCCcccee
Confidence 999999975 589999998643
No 213
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.04 E-value=2.8e-10 Score=132.39 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=101.7
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
...+++.|... +.||.|++|+||+|+.. +|+.||||+..+..... .
T Consensus 17 ~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~--------- 63 (303)
T 3a7i_A 17 KADPEELFTKL--EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED----------------------E--------- 63 (303)
T ss_dssp EECGGGTEEEE--EEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST----------------------T---------
T ss_pred CCChHHHHHHh--hhhcccCCeEEEEEEECCCCcEEEEEEecccccHH----------------------H---------
Confidence 34566777765 67999999999999864 79999999986542110 0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
.-++.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++. ....++...+...+.+++
T Consensus 64 -----~~~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~~~~qi~~~ 131 (303)
T 3a7i_A 64 -----IEDIQQEITVLSQC----DSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKG 131 (303)
T ss_dssp -----HHHHHHHHHHHHHC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEHHHHH--TTSCCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhC----CCCCEeEEEEEEe-cCCeEEEEEEeCCCCcHHHHH--hcCCCCHHHHHHHHHHHHHH
Confidence 01234555555444 2222222222222 234568999999999998863 456677777777666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|++|.||++. .++++|||....
T Consensus 132 l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~ 168 (303)
T 3a7i_A 132 LDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 168 (303)
T ss_dssp HHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred HHHHHHCCCccCCCChheEEECCCCCEEEeeccccee
Confidence 7889999999999999999964 599999997643
No 214
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.04 E-value=4.7e-10 Score=128.08 Aligned_cols=137 Identities=20% Similarity=0.132 Sum_probs=89.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. .|+.||||+.+.......... . -.+.+|++
T Consensus 13 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~---------------------------~------~~~~~e~~ 58 (271)
T 3dtc_A 13 EIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQT---------------------------I------ENVRQEAK 58 (271)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEC----------C---------------------------H------HHHHHHHH
T ss_pred eeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHH---------------------------H------HHHHHHHH
Confidence 6799999999999986 489999999865432210000 0 12455665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC---ccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG---FVH 563 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G---~vH 563 (1578)
.+.+++ +..-+.+-.++ ......+|||||++|.++.++. ....++...+...+.+++ +..+|..| ++|
T Consensus 59 ~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H 131 (271)
T 3dtc_A 59 LFAMLK----HPNIIALRGVC-LKEPNLCLVMEFARGGPLNRVL--SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIH 131 (271)
T ss_dssp HHHHCC----CTTBCCEEEEE-CCC--CEEEEECCTTEEHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCC
T ss_pred HHHhcC----CCCEeeEEEEE-ecCCceEEEEEcCCCCCHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceee
Confidence 555543 32223332332 2234568999999999998763 456778777776666665 78899999 889
Q ss_pred cCCCCCCCCCC-----------eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT-----------WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~-----------~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 132 ~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 132 RDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp SCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred cCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 99999999964 389999997643
No 215
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.04 E-value=3.4e-10 Score=131.04 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+....... -.+.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 56 (298)
T 1csn_A 16 RRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---------------------------------------PQLRDEY 56 (298)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---------------------------------------CCHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999987532110 0234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++.. ++ .+|.++. ......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|
T Consensus 57 ~~~~~l~~----~~--~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 57 RTYKLLAG----CT--GIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHTTT----CT--TCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhc----CC--CCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 55555532 22 2333332 2234568999999 9999987554344578887777776666 78899999999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~~ 586 (1578)
+|+||.|||+. . ++++|||....
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 99999999974 2 99999997643
No 216
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.04 E-value=3.5e-10 Score=136.04 Aligned_cols=138 Identities=19% Similarity=0.163 Sum_probs=96.9
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... .+.+
T Consensus 77 ~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 120 (367)
T 3l9p_A 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ------------------------------------DELD 120 (367)
T ss_dssp EECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHH------------------------------------HHHH
T ss_pred eEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChh------------------------------------hHHH
Confidence 57999999999999953 57899999875432211 1234
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.+|+..+.++. +...+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 121 ~~~E~~~l~~l~----hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 121 FLMEALIISKFN----HQNIVRCIGVS-LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCeEEEEE-ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHH
Confidence 566776666652 33323333333 22345689999999999988754221 2366666666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC---e---eEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT---W---LYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~---~---v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.|||+. . ++++|||....+
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~ 234 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence 89999999999999999975 3 899999987544
No 217
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.04 E-value=5.4e-10 Score=133.02 Aligned_cols=137 Identities=14% Similarity=0.073 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ . .-.+..|.
T Consensus 11 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~------------------~--------------~~~~~~E~ 56 (337)
T 1o6l_A 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA--KD------------------E--------------VAHTVTES 56 (337)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--TT------------------C--------------HHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--hh------------------H--------------HHHHHHHH
Confidence 67999999999999975 79999999987532110 00 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+|
T Consensus 57 ~~l~~l----~hp~iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 130 (337)
T 1o6l_A 57 RVLQNT----RHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLS-RERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130 (337)
T ss_dssp HHHHSC----CCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhC----CCCcCcceEEEE-EeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCc
Confidence 554433 222222222222 22345689999999999977643 234567666666555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 131 lkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 131 IKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp CCGGGEEECTTSCEEECCCTTCB
T ss_pred CCHHHEEECCCCCEEEeeccchh
Confidence 999999964 69999999753
No 218
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.04 E-value=3.3e-10 Score=140.25 Aligned_cols=134 Identities=18% Similarity=0.095 Sum_probs=98.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 194 ~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 235 (454)
T 1qcf_A 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS--------------------------------------VEAFLAEAN 235 (454)
T ss_dssp EEEECCSSEEEEEEEETTTEEEEEEEECTTSBC--------------------------------------HHHHHHHHH
T ss_pred EEcccCCceEEEEEEECCccEEEEEEecCCCcc--------------------------------------HHHHHHHHH
Confidence 689999999999999999999999998764211 013456776
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...|.+-.++. ....+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 236 ~l~~l----~h~~iv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 309 (454)
T 1qcf_A 236 VMKTL----QHDKLVKLHAVVT--KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309 (454)
T ss_dssp HHTTC----CCTTBCCEEEEEC--SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred HHhhC----CCCCEeeEEEEEe--CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 66554 3333344444442 34568999999999999875422 23567666666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 310 lkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 310 LRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp CSGGGEEECTTCCEEECSTTGGGG
T ss_pred CCHHHEEECCCCcEEEeeCCCceE
Confidence 999999965 599999998743
No 219
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.04 E-value=3.3e-10 Score=135.48 Aligned_cols=135 Identities=17% Similarity=0.142 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ + .-.+.+|+
T Consensus 16 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~---~---------------------------------~~~~~~Ei 59 (347)
T 3zgw_A 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS---D---------------------------------LPRIKTEI 59 (347)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---------------------------------------CCHHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch---H---------------------------------HHHHHHHH
Confidence 6899999999999996 589999999986432110 0 00134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+-.++ +....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 60 ~~l~~l~----hpnIv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 133 (347)
T 3zgw_A 60 EALKNLR----HQHICQLYHVL-ETANKIFMVLEYCPGGELFDYII-SQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRD 133 (347)
T ss_dssp HHHHTCC----CTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCC
T ss_pred HHHHhCC----CCCEeeEEEEE-EeCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCC
Confidence 5555542 33223333333 23345689999999999988643 345677777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 lkp~NIll~~~~~~kL~DFG~a~ 156 (347)
T 3zgw_A 134 LKPENLLFDEYHKLKLIDFGLCA 156 (347)
T ss_dssp CCGGGEEECTTSCEEECCCTTCB
T ss_pred ccHHHEEEcCCCCEEEEeccCcc
Confidence 999999964 59999999753
No 220
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.04 E-value=2.7e-10 Score=145.11 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+....-.. | .-.+.+|+
T Consensus 163 ~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~----~---------------------------------~~~~~~Ei 205 (573)
T 3uto_A 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHES----D---------------------------------KETVRKEI 205 (573)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEeccchh----h---------------------------------HHHHHHHH
Confidence 57999999999999975 8999999987532110 1 01134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .|..-|.+-.++.+ ...-+|||||++|..|.+...-....++..++...+.+++ ++.+|..|++|||
T Consensus 206 ~il~~l----~hpnIv~l~~~~~~-~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRD 280 (573)
T 3uto_A 206 QTMSVL----RHPTLVNLHDAFED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280 (573)
T ss_dssp HHHHHT----CCTTBCCEEEEEEC-SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEEE-CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecc
Confidence 666554 33334555555532 3456899999999998776432334567777666666665 7889999999999
Q ss_pred CCCCCCCC-----CeeEEecCCchhh
Q psy12972 566 PHSGNDVN-----TWLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv-----~~v~liDfG~~~~ 586 (1578)
+||.|||+ +.++++|||....
T Consensus 281 lKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 281 LKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp CCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred CChhhccccCCCCCCEEEeeccceeE
Confidence 99999996 3589999997644
No 221
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.03 E-value=4.2e-10 Score=129.98 Aligned_cols=134 Identities=19% Similarity=0.234 Sum_probs=96.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....... -.+..|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~e~ 55 (296)
T 4hgt_A 15 RKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---------------------------------------PQLHIES 55 (296)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---------------------------------------CCHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCCceEEEEeecccccc---------------------------------------hHHHHHH
Confidence 6899999999999996 58999999985432110 0234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +.+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 56 ~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~D 130 (296)
T 4hgt_A 56 KIYKMMQ----GGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRD 130 (296)
T ss_dssp HHHHHHT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHhc----CCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 5555554 3333333334434445568999999 8899887554456688887777776666 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCchhh
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~~~ 586 (1578)
++|.|||+ . .++++|||....
T Consensus 131 lkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 131 VKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp CSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred CCHHHeeeeccCCCCeEEEecCcccee
Confidence 99999997 2 489999997643
No 222
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.03 E-value=6.3e-10 Score=130.46 Aligned_cols=137 Identities=20% Similarity=0.159 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+......... .+..+..|.
T Consensus 63 ~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e~ 107 (311)
T 3p1a_A 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPK-----------------------------------DRARKLAEV 107 (311)
T ss_dssp EEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHH-----------------------------------HHHHHHHHH
T ss_pred heeccCCCeEEEEEEECCCCeEEEEEEecccccChH-----------------------------------HHHHHHHHH
Confidence 57999999999999976 899999998754322110 011112233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.+. ..+...+.+-..+ ......+|||||+.| ++.+........++...+...+.+++ +..+|..|++|+|
T Consensus 108 ~~~~~~---~~h~~iv~l~~~~-~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D 182 (311)
T 3p1a_A 108 GSHEKV---GQHPCCVRLEQAW-EEGGILYLQTELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLD 182 (311)
T ss_dssp HHHHHH---CCCTTBCCEEEEE-EETTEEEEEEECCCC-BHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHh---cCCCcEEEEEEEE-EeCCEEEEEEeccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 333222 2222223333333 234556899999944 66665433344577777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 183 ikp~NIll~~~~~~kl~DFG~a~ 205 (311)
T 3p1a_A 183 VKPANIFLGPRGRCKLGDFGLLV 205 (311)
T ss_dssp CSGGGEEECGGGCEEECCCTTCE
T ss_pred CCHHHEEECCCCCEEEccceeee
Confidence 999999975 59999999753
No 223
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.03 E-value=4.2e-10 Score=132.79 Aligned_cols=134 Identities=12% Similarity=0.100 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||+|+....-.. +-.+.+|+
T Consensus 11 ~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~--------------------------------------~~~~~~E~ 52 (321)
T 1tki_A 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD--------------------------------------QVLVKKEI 52 (321)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCTHH--------------------------------------HHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 57999999999999965 7999999987632110 11245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....-+|||||++|.+|.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l~----hpnIv~~~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~D 127 (321)
T 1tki_A 53 SILNIAR----HRNILHLHESFE-SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127 (321)
T ss_dssp HHHHHSC----CTTBCCEEEEEE-ETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCCCeEeEEEe-cCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCC
Confidence 6665542 333333333332 23456899999999999876432223577777777666666 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 128 lkp~NIl~~~~~~~~~kl~Dfg~a~ 152 (321)
T 1tki_A 128 IRPENIIYQTRRSSTIKIIEFGQAR 152 (321)
T ss_dssp CCGGGEEESSSSCCCEEECCCTTCE
T ss_pred CCHHHEEEccCCCCCEEEEECCCCe
Confidence 999999964 48999999764
No 224
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.03 E-value=4.1e-10 Score=136.64 Aligned_cols=136 Identities=19% Similarity=0.188 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||+|+....... + +..+.+|+
T Consensus 57 ~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~----~---------------------------------~~~~~~E~ 99 (387)
T 1kob_A 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL----D---------------------------------KYTVKNEI 99 (387)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH----H---------------------------------HHHHHHHH
T ss_pred EEEecCCCEEEEEEEECCCCCEEEEEEecccchh----h---------------------------------HHHHHHHH
Confidence 57999999999999975 7999999998643211 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ....-+|||||++|.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 100 ~il~~l----~hpnIv~~~~~~~-~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 174 (387)
T 1kob_A 100 SIMNQL----HHPKLINLHDAFE-DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174 (387)
T ss_dssp HHHTTC----CSTTBCCEEEEEE-CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCcCCCeEEEEEE-eCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 555444 2333333333332 23556899999999999876443334577777777766666 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchhh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 175 lkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 175 IKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp CCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred cchHHeEEecCCCCceEEEeccccee
Confidence 999999973 489999997643
No 225
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.03 E-value=2.2e-10 Score=137.45 Aligned_cols=144 Identities=20% Similarity=0.224 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEecC------CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTKE------GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~------G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.++ |+.||||+...... ....++..++.+.. ..
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~e~~~~~~~~~-------------------------~~ 94 (364)
T 3op5_A 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG-PLFTELKFYQRAAK-------------------------PE 94 (364)
T ss_dssp EECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH-HHHHHHHHHHHHCC-------------------------HH
T ss_pred EEEecCCCeEEEEeeecCccccccccceEEEEeeccch-hHHHHHHHHHhhhh-------------------------hH
Confidence 689999999999999764 58999999876532 12222222211100 01
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCC------CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKS------STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~------t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
+..|...+. .+.+. .|++++.... ...+|||||+ |.+|.++.......++...+...+.+++ +.
T Consensus 95 ~~~e~~~~~----~l~h~---~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~ 166 (364)
T 3op5_A 95 QIQKWIRTR----KLKYL---GVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILE 166 (364)
T ss_dssp HHHHHHHHT----TCSCC---CSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----hccCC---CCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence 112222221 12222 2333332211 2258999999 9999987554345688888777777766 88
Q ss_pred HHHHcCccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.|||+. .++++|||....
T Consensus 167 ~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~ 203 (364)
T 3op5_A 167 YIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203 (364)
T ss_dssp HHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEE
T ss_pred HHHHCCeEEecCCHHHEEEecCCCCeEEEEECCccee
Confidence 99999999999999999974 489999998743
No 226
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.03 E-value=4.8e-10 Score=129.05 Aligned_cols=136 Identities=15% Similarity=0.106 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. .+..||||+.+....... .-.+.
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 64 (281)
T 1mp8_A 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV------------------------------------REKFL 64 (281)
T ss_dssp EEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHH------------------------------------HHHHH
T ss_pred eEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHH------------------------------------HHHHH
Confidence 68999999999999875 356799998764321110 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+..-+.+-.++ .....+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 65 ~e~~~l~~l----~h~~iv~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (281)
T 1mp8_A 65 QEALTMRQF----DHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV 138 (281)
T ss_dssp HHHHHHHTC----CCTTBCCEEEEE--CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCccceEEEEE--ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 566666554 233223333333 22456899999999999887544444577777776666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|+||.|||+. .++++|||....
T Consensus 139 H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 139 HRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp CSCCSGGGEEEEETTEEEECC------
T ss_pred cccccHHHEEECCCCCEEECccccccc
Confidence 999999999965 599999997643
No 227
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.03 E-value=2.9e-10 Score=133.20 Aligned_cols=139 Identities=22% Similarity=0.213 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+......- +. ...|.+|+
T Consensus 18 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------~~------~~~~~~E~ 63 (311)
T 3ork_A 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDP----------------------------SF------YLRFRREA 63 (311)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSH----------------------------HH------HHHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCceEEEEEeCccccCCH----------------------------HH------HHHHHHHH
Confidence 6899999999999995 5899999999876432210 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++ .+..-+.+-..+..... ..+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++
T Consensus 64 ~~l~~l----~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 138 (311)
T 3ork_A 64 QNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH-TEGPMTPKRAIEVIADACQALNFSHQNGII 138 (311)
T ss_dssp TTCCCC----CCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHcC----CCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 444433 22222222222211111 1289999999999988754 234577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|+||.|||+. .++++|||....
T Consensus 139 H~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 139 HRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp CCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999964 599999997643
No 228
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.03 E-value=2.9e-10 Score=133.71 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+.++..... .+..+.+|++
T Consensus 36 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~e~~ 79 (326)
T 3uim_A 36 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG------------------------------------GELQFQTEVE 79 (326)
T ss_dssp TEEECCSSSEEEEECCSSSCCEEEEECCC-----------------------------------------CCCHHHHHHH
T ss_pred eeEecCCCcEEEEEEecCCCEEEEEEeccccCch------------------------------------HHHHHHHHHH
Confidence 6899999999999998899999999986542110 0112455555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc---C
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT---G 560 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~---G 560 (1578)
.+.++ .+..-+.+-.++ ...+..+|||||++|.+|.++..-. ...++...+...+.+++ +..+|.. |
T Consensus 80 ~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 154 (326)
T 3uim_A 80 MISMA----VHRNLLRLRGFC-MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 154 (326)
T ss_dssp GGGTC----CCTTBCCCCEEE-CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred HHHhc----cCCCccceEEEE-ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 54433 222223333333 2345668999999999998874321 11266666666665555 7889999 9
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 155 ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 155 IIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred eEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999965 59999999764
No 229
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.02 E-value=4.3e-10 Score=134.54 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=92.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++...... -. .-.+.+|.
T Consensus 47 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~--------------~~~~~~E~ 92 (350)
T 1rdq_E 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKL--------------------KQ--------------IEHTLNEK 92 (350)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHT--------------------TC--------------HHHHHHHH
T ss_pred EEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccH--------------------HH--------------HHHHHHHH
Confidence 68999999999999975 799999999865321100 00 01123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. -...-+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|+|
T Consensus 93 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 166 (350)
T 1rdq_E 93 RILQAV----NFPFLVKLEFSFK-DNSNLYMVMEYVAGGEMFSHLR-RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166 (350)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEE-cCCEEEEEEcCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccc
Confidence 444333 2222222222222 2345689999999999987643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 167 lkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 167 LKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CccceEEECCCCCEEEcccccce
Confidence 999999964 59999999764
No 230
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.02 E-value=4e-10 Score=140.65 Aligned_cols=134 Identities=18% Similarity=0.214 Sum_probs=98.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....... -++..|+
T Consensus 13 ~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---------------------------------------~~~~~E~ 53 (483)
T 3sv0_A 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---------------------------------------PQLLYES 53 (483)
T ss_dssp CCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---------------------------------------CCHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---------------------------------------HHHHHHH
Confidence 6799999999999995 58999999986532110 0134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +.+.+..-..+.......+|||||+ |.+|.++.......++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~il~~L~----~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrD 128 (483)
T 3sv0_A 54 KIYRILQ----GGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRD 128 (483)
T ss_dssp HHHHHTT----TSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHHhc----CCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 5555543 3333333344444455678999999 8899988654456788888877777766 8899999999999
Q ss_pred CCCCCCCCC------eeEEecCCchhh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~~ 586 (1578)
+||.|||++ .++++|||....
T Consensus 129 IKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 129 IKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp CCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred cCcceEEEecCCCCCeEEEEeCCccee
Confidence 999999973 499999997643
No 231
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.02 E-value=3.1e-10 Score=131.33 Aligned_cols=137 Identities=16% Similarity=0.152 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|+..+|+.||||+.+...... .. . -.+.+|++
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~--------------------~~---------~------~~~~~E~~ 52 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE--------------------GI---------P------STTIREIS 52 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGG--------------------CC---------C------HHHHHHHH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEecccccc--------------------cc---------c------hhHHHHHH
Confidence 5799999999999999889999999986542210 00 0 01234444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+..-+.+-.++. ....-+|||||++| .+.+.......+++...+...+.+++ +..+|..|++|+|+
T Consensus 53 ~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 126 (288)
T 1ob3_A 53 ILKEL----KHSNIVKLYDVIH-TKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDL 126 (288)
T ss_dssp GGGGC----CCTTBCCEEEEEE-CSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhc----CCCCEeeeeeEEc-cCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 44443 2332233333332 23456899999987 66665433345677776666666655 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchhh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~~ 586 (1578)
+|.|||+. .++++|||....
T Consensus 127 kp~Nil~~~~~~~kl~Dfg~~~~ 149 (288)
T 1ob3_A 127 KPQNLLINREGELKIADFGLARA 149 (288)
T ss_dssp CGGGEEECTTSCEEECCTTHHHH
T ss_pred CHHHEEEcCCCCEEEeECccccc
Confidence 99999964 699999997644
No 232
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.02 E-value=7.3e-10 Score=130.42 Aligned_cols=130 Identities=17% Similarity=0.184 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+..+.... ++.+|+
T Consensus 42 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----------------------------------------~~~~E~ 81 (330)
T 3nsz_A 42 RKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK----------------------------------------KIKREI 81 (330)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCCHH----------------------------------------HHHHHH
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEecccchH----------------------------------------HHHHHH
Confidence 6899999999999985 58999999998754321 134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++. +...+.+-.++.+- ....+|||||++|..+.++. ..++...+...+.+++ +..+|..|++|+
T Consensus 82 ~~l~~l~~---~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 154 (330)
T 3nsz_A 82 KILENLRG---GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSMGIMHR 154 (330)
T ss_dssp HHHHHHTT---STTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHG----GGCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHcCC---CCCEEEeeeeeccCCCCceEEEEeccCchhHHHHH----HhCCHHHHHHHHHHHHHHHHHHHhCCeeeC
Confidence 66665541 22223333444332 34458999999999887763 2366666666666655 788999999999
Q ss_pred CCCCCCCCCC----eeEEecCCchh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|.|||+. .++++|||...
T Consensus 155 Dikp~Nil~~~~~~~~kl~Dfg~a~ 179 (330)
T 3nsz_A 155 DVKPHNVMIDHEHRKLRLIDWGLAE 179 (330)
T ss_dssp CCSGGGEEEETTTTEEEECCCTTCE
T ss_pred CCCHHHEEEcCCCCEEEEEeCCCce
Confidence 9999999964 58999999763
No 233
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.02 E-value=5.7e-10 Score=128.06 Aligned_cols=133 Identities=15% Similarity=0.111 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+||+|+..+++.||||+.+++.... -.+.+|++
T Consensus 19 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 60 (279)
T 1qpc_A 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP--------------------------------------DAFLAEAN 60 (279)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEECTTSSCH--------------------------------------HHHHHHHH
T ss_pred eeecCCCCeEEEEEEEcCCcEEEEEEecCCcccH--------------------------------------HHHHHHHH
Confidence 6799999999999999889999999986532110 02456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. +...+.+-.++. ....++||||++|.+|.++.... ...++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 134 (279)
T 1qpc_A 61 LMKQLQ----HQRLVRLYAVVT--QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134 (279)
T ss_dssp HHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhCC----CcCcceEEEEEc--CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 666653 333333334432 34568999999999998874322 22577777776666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 135 ikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 135 LRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHhhEEEcCCCCEEECCCcccc
Confidence 999999964 58999999764
No 234
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.02 E-value=7.2e-10 Score=130.06 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=92.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+........ . ..-.|.+|++
T Consensus 43 ~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~------------------------~-----------~~~~~~~E~~ 86 (309)
T 3p86_A 43 EKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHA------------------------E-----------RVNEFLREVA 86 (309)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSH------------------------H-----------HHHHHHHHHH
T ss_pred eEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCH------------------------H-----------HHHHHHHHHH
Confidence 6899999999999976 78999999986432110 0 0012456777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcC--cc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTG--FV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G--~v 562 (1578)
.+.+++ +...+.+-..+ ......+|||||++|.+|.++..... ..++...+...+.+++ +..+|..| ++
T Consensus 87 ~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~iv 161 (309)
T 3p86_A 87 IMKRLR----HPNIVLFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161 (309)
T ss_dssp HHHHCC----CTTBCCEEEEE-CSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCC
T ss_pred HHHhCC----CCCEeeEEEEE-EECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEE
Confidence 776663 22222222222 22344689999999999988743111 1266666666666655 78899999 99
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 162 H~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 162 HRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CTTCCGGGEEECTTCCEEECCCC---
T ss_pred CCCCChhhEEEeCCCcEEECCCCCCc
Confidence 999999999965 59999999763
No 235
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.02 E-value=5.7e-10 Score=128.89 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|+||+|+.+ +|+.||||+.++..... + .-.+.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~~~~ 59 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---D---------------------------------TEEMMR 59 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHH---H---------------------------------HHHHHH
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchh---H---------------------------------HHHHHH
Confidence 48999999999999854 68899999987642211 0 012455
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|++.+.++. +...+.+-.++ .....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 60 E~~~l~~l~----h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 133 (287)
T 1u59_A 60 EAQIMHQLD----NPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 133 (287)
T ss_dssp HHHHHHHCC----CTTBCCEEEEE--ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHhCC----CCCEeEEEEEe--cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 666666552 32223333333 23456899999999999887533334577777777666665 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.||++. .++++|||....
T Consensus 134 ~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 134 RDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp CCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CCCchheEEEcCCCCEEECcccceee
Confidence 99999999964 599999997643
No 236
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.02 E-value=6.3e-10 Score=136.13 Aligned_cols=138 Identities=14% Similarity=0.104 Sum_probs=93.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+..-... . . ..-.++.|.
T Consensus 67 ~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~--~------------~--------------------~~~~~~~E~ 112 (412)
T 2vd5_A 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLK--R------------G--------------------EVSCFREER 112 (412)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH--H------------G--------------------GGCCHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhh--H------------H--------------------HHHHHHHHH
Confidence 68999999999999975 79999999986421100 0 0 001134454
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ +++. +.+-..+. -...-+|||||++|.+|.++..-....++...+...+.+++ ++.+|..|++||
T Consensus 113 ~il~~~-----~hp~Iv~l~~~~~-~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHr 186 (412)
T 2vd5_A 113 DVLVNG-----DRRWITQLHFAFQ-DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186 (412)
T ss_dssp HHHHHS-----CTTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhc-----CCCCeeeEEEEEe-eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 444433 2232 22222222 23445799999999999887543334577766655555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 187 DLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 187 DIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCEE
T ss_pred ccCHHHeeecCCCCEEEeechhhee
Confidence 9999999964 599999997643
No 237
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.02 E-value=7.6e-11 Score=116.42 Aligned_cols=77 Identities=18% Similarity=0.303 Sum_probs=65.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------cchhhHhHcCccccCCcEEEEcCCccccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKE 946 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~ 946 (1578)
.++.+|.||||||++|+.+.|.|+++++.++ .|||+ .++++|++|+|.+ +||+++ +|+. +.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~-------~v~~~~~~~~~~~~~l~~~~~V~~-~PT~~i--~G~~---~~ 78 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT---YT 78 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCTTCTTSCCCHHHHHTTCCS-SSEEEE--TTEE---EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC-------EEEEecccccchhHHHHHHcCCeE-eCEEEE--CCEE---ec
Confidence 4566899999999999999999999997764 56777 6789999999998 999877 7763 55
Q ss_pred CCCCHHHHHHHHHhhC
Q psy12972 947 PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 947 G~~s~~~L~~fi~~~l 962 (1578)
|.++.++|.+|+.-..
T Consensus 79 G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 79 GVRSLEALAVASGYPL 94 (106)
T ss_dssp SCCCHHHHHHHHTCCC
T ss_pred CCCCHHHHHHHhCCcc
Confidence 9999999999985443
No 238
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.02 E-value=6e-10 Score=137.82 Aligned_cols=133 Identities=18% Similarity=0.142 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+.+... -+|.+|++
T Consensus 199 ~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 238 (450)
T 1k9a_A 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATA---------------------------------------QAFLAEAS 238 (450)
T ss_dssp EEEEECSSEEEEEEEET-TEEEEEEEESSCTTS---------------------------------------HHHHHHHH
T ss_pred eeecCcCCeeEEEEEec-CCeEEEEEeCCchHH---------------------------------------HHHHHHHH
Confidence 68999999999999874 889999998753210 12456776
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+-.++.+-...-+|||||++|.+|.++..-... .++...+...+.++. +..+|..|++|+|
T Consensus 239 ~l~~l----~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrD 314 (450)
T 1k9a_A 239 VMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314 (450)
T ss_dssp HHHTC----CCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHhc----cCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 66655 3333344444444433456899999999999887543222 256666666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 315 lkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 315 LAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp CCGGGEEECTTSCEEECCCTTCE
T ss_pred CCHhhEEECCCCCEEEeeCCCcc
Confidence 999999975 59999999764
No 239
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.01 E-value=1.7e-10 Score=133.10 Aligned_cols=140 Identities=16% Similarity=0.064 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-...-.... . . --.+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~----------~-------------~-------~~~~~~E~ 74 (287)
T 4f0f_A 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI----------E-------------K-------FQEFQREV 74 (287)
T ss_dssp EECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH----------C-------------C-------SHHHHHHH
T ss_pred hccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH----------H-------------H-------HHHHHHHH
Confidence 67999999999999974 8999999998654322100000 0 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC--ccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG--FVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G--~vH 563 (1578)
+.+.++. + + .|++++.-+.+...|||||++|.+|.+...-....++...+...+.+++ +..+|..| ++|
T Consensus 75 ~~l~~l~----h-~--~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH 147 (287)
T 4f0f_A 75 FIMSNLN----H-P--NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147 (287)
T ss_dssp HHHTTCC----C-T--TBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBC
T ss_pred HHHHhCC----C-C--CchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeec
Confidence 5555542 2 2 2344444445566899999999998776433344577777766666665 78899999 999
Q ss_pred cCCCCCCCCCC---e-----eEEecCCchh
Q psy12972 564 ADPHSGNDVNT---W-----LYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~-----v~liDfG~~~ 585 (1578)
+|++|.|||+. . ++++|||...
T Consensus 148 ~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 148 RDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp SCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred CCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 99999999974 2 8999999764
No 240
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.01 E-value=4.2e-10 Score=130.40 Aligned_cols=137 Identities=15% Similarity=0.052 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... .-+|
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 58 (295)
T 3ugc_A 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-------------------------------------LRDF 58 (295)
T ss_dssp EEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHH-------------------------------------HHHH
T ss_pred heeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHH-------------------------------------HHHH
Confidence 6799999999999984 378999999986532211 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++... ...-+|||||++|.+|.++.......++...+...+.+++ +..+|..|
T Consensus 59 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 59 EREIEILKSLQ----HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 56666665553 32223332332111 1234799999999999987544344577777776666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 99999999999965 599999997643
No 241
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.01 E-value=5.6e-10 Score=133.76 Aligned_cols=137 Identities=15% Similarity=0.069 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 26 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~--~~------------------~~--------------~~~~~E~ 71 (353)
T 2i0e_A 26 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DD------------------DV--------------ECTMVEK 71 (353)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH--TT------------------CH--------------HHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc--ch------------------HH--------------HHHHHHH
Confidence 68999999999999976 58999999987542110 00 00 0112333
Q ss_pred HHHHHHHHhhCCCCCee-ecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVY-IPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~-vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+..+ .+++.|. +-..+ .....-+|||||++|.+|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 72 ~~l~~~----~~hp~iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 145 (353)
T 2i0e_A 72 RVLALP----GKPPFLTQLHSCF-QTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145 (353)
T ss_dssp HHHTCT----TCCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc----CCCCEEeeEEEEE-EcCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 333222 2334322 22222 22345689999999999987643 234577776666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 146 Dlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 146 DLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred cCCHHHEEEcCCCcEEEEeCCccc
Confidence 9999999964 59999999764
No 242
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.01 E-value=5e-10 Score=141.68 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=100.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+++.||||+.+++... .-+|.+|++
T Consensus 273 ~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~~ 314 (535)
T 2h8h_A 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS--------------------------------------PEAFLQEAQ 314 (535)
T ss_dssp EEEEECSSEEEEEEEETTTEEEEEEEECTTSSC--------------------------------------HHHHHHHHH
T ss_pred eecccCCCeEEEEEEECCCceEEEEEeCCCCCC--------------------------------------HHHHHHHHH
Confidence 579999999999999988889999998764311 013567777
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.+++ +...|.+-.++.+ ...+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+|
T Consensus 315 ~l~~l~----hpniv~~~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrD 388 (535)
T 2h8h_A 315 VMKKLR----HEKLVQLYAVVSE--EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388 (535)
T ss_dssp HHHHCC----CTTBCCEEEEECS--SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----CCCEeeEEEEEee--ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 777663 3333444444432 4568999999999999875422 23477777777776666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||++ .++++|||....
T Consensus 389 lkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 389 LRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp CSGGGEEECGGGCEEECCTTSTTT
T ss_pred CCHhhEEEcCCCcEEEccccccee
Confidence 999999975 589999998643
No 243
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.01 E-value=6.6e-10 Score=130.62 Aligned_cols=135 Identities=16% Similarity=0.075 Sum_probs=97.0
Q ss_pred cccccccceEEEEEEec-----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... ..-.+
T Consensus 37 ~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~ 80 (318)
T 3lxp_A 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQ------------------------------------HRSGW 80 (318)
T ss_dssp EEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHH------------------------------------HHHHH
T ss_pred heecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChH------------------------------------HHHHH
Confidence 68999999999888643 78999999987543211 01124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.+++ +...+.+-.++.+.. ..-+|||||++|.+|.++ +...+++...+...+.+++ +..+|..|
T Consensus 81 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~--l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 81 KQEIDILRTLY----HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY--LPRHSIGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHCC----CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHH--GGGSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CcchhhEEEEEecCCCceEEEEEecccCCcHHHH--HhhCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55666666653 333334434443322 334799999999999887 3456688887777766666 78999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred ccCCCCchheEEEcCCCCEEECCccccc
Confidence 99999999999965 58999999764
No 244
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.01 E-value=8.3e-10 Score=128.70 Aligned_cols=137 Identities=14% Similarity=0.072 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.++..... ..-.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 72 (313)
T 1t46_A 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT------------------------------------EREA 72 (313)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred HhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHH------------------------------------HHHH
Confidence 6899999999999985 367899999987643210 0113
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc-----------------CCCHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK-----------------GFSLADV 544 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~-----------------~~~~~~v 544 (1578)
+.+|++.+.++. .++. +.+-..+ ......+|||||++|.+|.++...... .++...+
T Consensus 73 ~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (313)
T 1t46_A 73 LMSELKVLSYLG----NHMNIVNLLGAC-TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (313)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHhhcc----cCCCeeeEEEEE-ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence 466777776662 2332 2222222 234566899999999999887542221 3677777
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 148 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 194 (313)
T 1t46_A 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 194 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSC
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccc
Confidence 77666665 7889999999999999999964 589999997643
No 245
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.01 E-value=9.7e-10 Score=132.83 Aligned_cols=137 Identities=18% Similarity=0.155 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec--------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. +++.||||+.+...... + .
T Consensus 75 ~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 118 (382)
T 3tt0_A 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK---D---------------------------------L 118 (382)
T ss_dssp EEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHH---H---------------------------------H
T ss_pred eEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHH---H---------------------------------H
Confidence 68999999999999852 34689999987653211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVD 545 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~ 545 (1578)
-++.+|++.+.++. .+...+.+-..+ ......+|||||++|.+|.++..... ..++...+.
T Consensus 119 ~~~~~E~~~l~~l~---~hpnIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 194 (382)
T 3tt0_A 119 SDLISEMEMMKMIG---KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194 (382)
T ss_dssp HHHHHHHHHHHHHC---CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhc---CCchhhhheeee-ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHH
Confidence 13456666666663 122223332332 22345689999999999988754221 236777777
Q ss_pred HHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 546 RKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 546 ~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+.+++ +..+|..|++|+|++|.|||+. .++++|||...
T Consensus 195 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 239 (382)
T 3tt0_A 195 SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239 (382)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCC
T ss_pred HHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccc
Confidence 7666666 7889999999999999999965 59999999764
No 246
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.00 E-value=6.4e-10 Score=131.22 Aligned_cols=137 Identities=12% Similarity=0.066 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+........ . .-.+..|.
T Consensus 12 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~--------------------~--------------~~~~~~E~ 57 (318)
T 1fot_A 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK--------------------Q--------------VEHTNDER 57 (318)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTT--------------------C--------------HHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhh--------------------H--------------HHHHHHHH
Confidence 67999999999999975 7999999998754221000 0 00123444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+..-+.+-..+. -...-+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l----~hp~Iv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrD 131 (318)
T 1fot_A 58 LMLSIV----THPFIIRMWGTFQ-DAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRD 131 (318)
T ss_dssp HHHHSC----CBTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHhhC----CCCCCceEeEEEE-eCCEEEEEEeCCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 444332 2222233323332 2345679999999999988743 234566666555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 132 lkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 132 LKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp CCGGGEEECTTSCEEECCCSSCE
T ss_pred CChheEEEcCCCCEEEeecCcce
Confidence 999999964 69999999764
No 247
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.00 E-value=5.7e-10 Score=132.99 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... ..-.
T Consensus 28 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 71 (359)
T 3vhe_A 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 71 (359)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHH------------------------------------HHHH
Confidence 6899999999999973 367899999987543211 0113
Q ss_pred HHHHHHHHHHHHHhhCCCC-CeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc------------------------
Q psy12972 483 FLNEGRNAERCSKDLAHLP-YVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK------------------------ 537 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~-~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~------------------------ 537 (1578)
+.+|++.+.++. +++ .+.+-..+.+-...-++||||++|.+|.++......
T Consensus 72 ~~~E~~~l~~l~----~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 72 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHhhc----CCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 466777776663 233 233333443333446899999999999887432111
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC
Q psy12972 538 -----------------------------------------GFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT 574 (1578)
Q Consensus 538 -----------------------------------------~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~ 574 (1578)
.++...+...+.+++ +..+|..|++|+|++|.|||+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 155566666555555 7889999999999999999975
Q ss_pred ---eeEEecCCchh
Q psy12972 575 ---WLYPVDLGDKF 585 (1578)
Q Consensus 575 ---~v~liDfG~~~ 585 (1578)
.++++|||...
T Consensus 228 ~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 228 EKNVVKICDFGLAR 241 (359)
T ss_dssp GGGCEEECCCGGGS
T ss_pred CCCcEEEEecccee
Confidence 58999999764
No 248
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.00 E-value=9.7e-10 Score=131.28 Aligned_cols=137 Identities=17% Similarity=0.112 Sum_probs=92.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 23 ~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~--~~------------------~~--------------~~~~~E~ 68 (345)
T 1xjd_A 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM--DD------------------DV--------------ECTMVEK 68 (345)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH--TT------------------CH--------------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh--hh------------------hH--------------HHHHHHH
Confidence 68999999999999975 79999999987542100 00 00 0123344
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+. . .++. +.+-..+. ....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|+
T Consensus 69 ~il~~~---~-~hp~iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 142 (345)
T 1xjd_A 69 RVLSLA---W-EHPFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142 (345)
T ss_dssp HHHHHH---T-TCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhc---C-CCCCCCcEEEEEE-eCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 444333 1 2332 33323332 2345689999999999987643 234577776666665655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 143 Dlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 143 DLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred CCChhhEEECCCCCEEEeEChhhh
Confidence 9999999964 59999999764
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.00 E-value=5.5e-10 Score=129.69 Aligned_cols=129 Identities=12% Similarity=0.089 Sum_probs=87.9
Q ss_pred hccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 402 LFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 402 iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
-|.-. +.||.|++|+||+|+.. +|+.||||+.++..... .+. .
T Consensus 32 ~y~i~--~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~----------------------------~~~------~ 75 (286)
T 3uqc_A 32 RYRLL--IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP----------------------------DDV------L 75 (286)
T ss_dssp TEEEE--EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC----------------------------HHH------H
T ss_pred cEEEE--EEEcccCCeEEEEEEecCCCceEEEEEECcccccC----------------------------HHH------H
Confidence 34444 78999999999999975 69999999998653311 000 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
-.|.+|++.+.++ .+..-+.+-.++ ......+|||||++|.+|.++. ..+....++...+.+++ +..+|.
T Consensus 76 ~~~~~e~~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~g~~L~~~l---~~~~~~~~~~~i~~ql~~aL~~lH~ 147 (286)
T 3uqc_A 76 QETLSRTLRLSRI----DKPGVARVLDVV-HTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGAIRAMQSLAAAADAAHR 147 (286)
T ss_dssp HHHHHHHHHHHTC----CCTTBCCEEEEE-EETTEEEEEEECCCEEEHHHHH---TTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC----CCCCcceeeEEE-EECCcEEEEEEecCCCCHHHHH---hcCCChHHHHHHHHHHHHHHHHHHH
Confidence 1245555555443 232222222222 2234568999999999998873 34566677766666655 788999
Q ss_pred cCccccCCCCCCCCCC
Q psy12972 559 TGFVHADPHSGNDVNT 574 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~ 574 (1578)
.|++|+|+||+|||+.
T Consensus 148 ~givH~Dikp~NIll~ 163 (286)
T 3uqc_A 148 AGVALSIDHPSRVRVS 163 (286)
T ss_dssp TTCCCCCCSGGGEEEE
T ss_pred CCCccCCCCcccEEEc
Confidence 9999999999999953
No 250
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.00 E-value=1.2e-09 Score=125.52 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+..... .+ .-.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~---------------------------------~~~~~~e~ 56 (284)
T 3kk8_A 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RD---------------------------------FQKLEREA 56 (284)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCH--HH---------------------------------HHHHHHHH
T ss_pred hhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCH--HH---------------------------------HHHHHHHH
Confidence 67999999999999965 79999999986542110 00 01235666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ ...+..++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 130 (284)
T 3kk8_A 57 RICRKLQ----HPNIVRLHDSI-QEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHSNGIVHRN 130 (284)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHHcC----CCCcCeEEEEE-EcCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCC
Confidence 6666653 22223333333 22345689999999998876543 334577777766666655 7889999999999
Q ss_pred CCCCCCCCC---e---eEEecCCchh
Q psy12972 566 PHSGNDVNT---W---LYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~---v~liDfG~~~ 585 (1578)
++|.||++. . ++++|||...
T Consensus 131 ikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 131 LKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp CCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999973 2 8999999763
No 251
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.00 E-value=7e-10 Score=131.47 Aligned_cols=137 Identities=15% Similarity=0.052 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.++...... .-.
T Consensus 51 ~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~ 94 (344)
T 1rjb_A 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSE------------------------------------REA 94 (344)
T ss_dssp EEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------------------------------------------CHH
T ss_pred eeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHH------------------------------------HHH
Confidence 6899999999999996 2567899999875421100 012
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc----------------------CC
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK----------------------GF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~----------------------~~ 539 (1578)
+.+|++.+.++. .++. +.+-.++ ......+|||||++|.+|.++..-... .+
T Consensus 95 ~~~E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 95 LMSELKMMTQLG----SHENIVNLLGAC-TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHhhc----CCCCeeeEEEEE-eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 456666666662 2333 2222322 234567899999999999887542211 25
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~ 221 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSC
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcc
Confidence 6666666666655 7889999999999999999964 599999997643
No 252
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.00 E-value=2.4e-09 Score=138.18 Aligned_cols=138 Identities=13% Similarity=0.100 Sum_probs=98.5
Q ss_pred CCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 407 DENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.+.||.|++|.||+|... +|+.||||+.+....... ..-+|
T Consensus 373 ~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~-----------------------------------~~~~~ 417 (635)
T 4fl3_A 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPA-----------------------------------LKDEL 417 (635)
T ss_dssp EEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGG-----------------------------------GHHHH
T ss_pred cCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHH-----------------------------------HHHHH
Confidence 3457999999999999653 578999999976533210 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.+++ +...|.+-.++. ....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|+
T Consensus 418 ~~E~~il~~l~----hpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~-~~~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 418 LAEANVMQQLD----NPYIVRMIGICE--AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCEeeEEEEEe--cCCEEEEEEccCCCCHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 66777776653 333344444442 234679999999999988753 234577777766666665 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~ 518 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKA 518 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHH
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccc
Confidence 9999999999964 599999997643
No 253
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.00 E-value=9e-10 Score=132.33 Aligned_cols=146 Identities=18% Similarity=0.178 Sum_probs=99.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+....-... .+
T Consensus 26 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--~~------------------------------ 71 (362)
T 2bdw_A 26 KFSDNYDVK--EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA--RD------------------------------ 71 (362)
T ss_dssp HHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCH--HH------------------------------
T ss_pred CcccCeEEe--eEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCH--HH------------------------------
Confidence 344455544 67999999999999975 79999999986432110 00
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.-.+.+|++.+.++. +...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 72 ---~~~~~~E~~il~~l~----hpnIv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~al~ 142 (362)
T 2bdw_A 72 ---FQKLEREARICRKLQ----HPNIVRLHDSIQ-EESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIA 142 (362)
T ss_dssp ---HHHHHHHHHHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHT-TCSCCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCC----CCCCCeEEEEEE-eCCEEEEEEecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 012456666666552 333233333332 2345689999999999876532 233467777666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFR 586 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~ 586 (1578)
.+|..|++|+|++|.|||+. .++++|||....
T Consensus 143 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp HHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred HHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 89999999999999999974 389999997643
No 254
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.00 E-value=7.9e-10 Score=132.75 Aligned_cols=133 Identities=15% Similarity=0.067 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+...+.... -.+.+|+
T Consensus 26 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------------------------~~~~~E~ 67 (361)
T 3uc3_A 26 KDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID--------------------------------------ENVQREI 67 (361)
T ss_dssp EEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC--------------------------------------HHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc--------------------------------------HHHHHHH
Confidence 67999999999999976 89999999986432110 0134555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
..+.++ .+...+.+-.++. ..+..+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~D 141 (361)
T 3uc3_A 68 INHRSL----RHPNIVRFKEVIL-TPTHLAIIMEYASGGELYERIC-NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRD 141 (361)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCC
T ss_pred HHHHhC----CCCCCCcEEEEEe-eCCEEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 555554 2333344444442 2345689999999999987643 334677777777666665 7889999999999
Q ss_pred CCCCCCCCC-----eeEEecCCchh
Q psy12972 566 PHSGNDVNT-----WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-----~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 lkp~Nill~~~~~~~~kl~Dfg~a~ 166 (361)
T 3uc3_A 142 LKLENTLLDGSPAPRLKICDFGYSK 166 (361)
T ss_dssp CCGGGEEECSSSSCCEEECCCCCC-
T ss_pred CCHHHEEEcCCCCceEEEeecCccc
Confidence 999999974 38999999764
No 255
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.00 E-value=6e-10 Score=137.29 Aligned_cols=137 Identities=13% Similarity=0.067 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ... ..-.++.|.
T Consensus 80 ~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~----------------~~~------------------~~~~~~~E~ 125 (437)
T 4aw2_A 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML----------------KRA------------------ETACFREER 125 (437)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH----------------HTT------------------TTCCHHHHH
T ss_pred EEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh----------------hHH------------------HHHHHHHHH
Confidence 68999999999999976 5899999998642110 000 001134555
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++ +++. +.+-..+ .-...-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++||
T Consensus 126 ~il~~~-----~hp~Iv~l~~~~-~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHr 199 (437)
T 4aw2_A 126 DVLVNG-----DSKWITTLHYAF-QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHR 199 (437)
T ss_dssp HHHHHS-----CTTTBCCEEEEE-ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhC-----CCCCEEEEEEEE-eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEec
Confidence 555443 2332 2222222 223456899999999999887542235677666665555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 200 DLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 200 DIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp CCSGGGEEECTTSCEEECCCTTCE
T ss_pred ccCHHHeeEcCCCCEEEcchhhhh
Confidence 9999999964 59999999763
No 256
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=98.99 E-value=6.1e-10 Score=136.17 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=92.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..- . .-.+..|.
T Consensus 75 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~----------------~~~--~----------------~~~~~~E~ 120 (410)
T 3v8s_A 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI----------------KRS--D----------------SAFFWEER 120 (410)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH----------------HTC--C----------------CSTHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh----------------hhH--H----------------HHHHHHHH
Confidence 68999999999999976 6999999998642110 000 0 00134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-|.+-..+. -...-+|||||++|.+|.++ +...+++...+...+.+++ ++.+|..|++|||
T Consensus 121 ~il~~l----~hp~Iv~l~~~~~-~~~~~~lV~E~~~gg~L~~~--l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrD 193 (410)
T 3v8s_A 121 DIMAFA----NSPWVVQLFYAFQ-DDRYLYMVMEYMPGGDLVNL--MSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRD 193 (410)
T ss_dssp HHHHHC----CCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCeEEEEEE-ECCEEEEEEeCCCCCcHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecc
Confidence 444443 2222233323332 23445799999999999886 3456777766655555555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 194 LKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 194 VKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHHHeeECCCCCEEEeccceeE
Confidence 999999964 69999999764
No 257
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.3e-09 Score=140.20 Aligned_cols=136 Identities=15% Similarity=0.144 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
..||.|++|+||+|+.+ +|+.||||+.+.+.... + .-+|.+
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~---~---------------------------------~~~~~~ 385 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA---D---------------------------------TEEMMR 385 (613)
T ss_dssp EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSST---T---------------------------------HHHHHH
T ss_pred cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChH---H---------------------------------HHHHHH
Confidence 36999999999999875 57789999987653211 0 012456
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
|++.+.++ .+...|.+-.++.. ...+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++|
T Consensus 386 E~~il~~l----~hpniv~l~~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH 459 (613)
T 2ozo_A 386 EAQIMHQL----DNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVH 459 (613)
T ss_dssp HHHHHTTC----CCTTBCCEEEEEES--SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHhC----CCCCEeeEEEEecc--CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 66666554 23333444444432 456899999999999887433334577777777666666 88899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchhh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|++|.|||+. .++++|||....
T Consensus 460 rDlkp~NILl~~~~~vkL~DFGla~~ 485 (613)
T 2ozo_A 460 RNLAARNVLLVNRHYAKISDFGLSKA 485 (613)
T ss_dssp SCCSGGGEEEEETTEEEECCCSTTTT
T ss_pred CcCCHHHEEEcCCCcEEEeeccCccc
Confidence 99999999964 599999998743
No 258
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=98.99 E-value=8.5e-10 Score=126.30 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=95.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+...... + ..-.+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 62 (276)
T 2h6d_A 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSL--D--------------------------------VVGKIKREI 62 (276)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--T--------------------------------CHHHHHHHH
T ss_pred eeecCCCCeEEEEEEECCCCceEEEEEeccccccch--h--------------------------------HHHHHHHHH
Confidence 68999999999999976 899999999875321100 0 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +...+.+-..+. ..+..+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 63 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 136 (276)
T 2h6d_A 63 QNLKLFR----HPHIIKLYQVIS-TPTDFFMVMEYVSGGELFDYIC-KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRD 136 (276)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred HHHhcCC----CCCEeEEEEEEe-cCCeEEEEEeccCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCC
Confidence 6655442 222233323332 2355689999999999988743 234567777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 137 l~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 137 LKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp CCGGGEEECTTSCEEECCCCGGG
T ss_pred CChhhEEECCCCCEEEeeccccc
Confidence 999999965 59999999764
No 259
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=98.99 E-value=8e-10 Score=130.24 Aligned_cols=136 Identities=15% Similarity=0.024 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-... .-.+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 71 (327)
T 3lxl_A 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-------------------------------------QRDF 71 (327)
T ss_dssp EEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHH-------------------------------------HHHH
T ss_pred hhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 6899999999999984 478999999986542111 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++ .+...+.+-.++.. -....+|||||++|.+|.++.......++...+...+.+++ +..+|..|
T Consensus 72 ~~E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (327)
T 3lxl_A 72 QREIQILKAL----HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147 (327)
T ss_dssp HHHHHHHHTC----CCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhc----CCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5666666555 22222222223322 22335799999999999987654345578777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.|||+. .++++|||...
T Consensus 148 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 148 CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred ccCCCCChhhEEECCCCCEEEcccccce
Confidence 99999999999964 59999999764
No 260
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=98.99 E-value=9.2e-10 Score=127.73 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=100.8
Q ss_pred CChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
.++.+.|.-. +.||+|++|.||+|+.. +|+.||||+....-...
T Consensus 15 ~~~~~~y~i~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------------------- 59 (302)
T 2j7t_A 15 LDPNEVWEIV--GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE--------------------------------- 59 (302)
T ss_dssp SCGGGTEEEE--EEEECSTTCCEEEEEETTTCCEEEEEEEC----CC---------------------------------
T ss_pred cCCccceeec--ceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHH---------------------------------
Confidence 3455666665 57999999999999976 69999999986432110
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
.-++.+|++.+.++ .+..-+.+-.++. .....+|||||++|.++.++..-...+++...+...+.+++ +
T Consensus 60 ----~~~~~~e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l 130 (302)
T 2j7t_A 60 ----LEDYIVEIEILATC----DHPYIVKLLGAYY-HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEAL 130 (302)
T ss_dssp ----HHHHHHHHHHHHHC----CCTTBCCEEEEEE-CC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhcC----CCCCEeeeeeeee-eCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 01235566666554 2222233323332 23566899999999999887544456688777777666665 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.||++. .++++|||...
T Consensus 131 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 165 (302)
T 2j7t_A 131 NFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSA 165 (302)
T ss_dssp HHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred HHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence 889999999999999999965 59999999754
No 261
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.99 E-value=6.2e-10 Score=133.21 Aligned_cols=139 Identities=14% Similarity=0.136 Sum_probs=94.2
Q ss_pred cccccccceEEEEEEe----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVT----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+. .+|+.||||+.+......-... .-.+.
T Consensus 60 ~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~---------------------------------~~~~~ 106 (355)
T 1vzo_A 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKT---------------------------------TEHTR 106 (355)
T ss_dssp EEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESS---------------------------------GGGCC
T ss_pred EEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhH---------------------------------HHHHH
Confidence 6799999999999997 3799999999875321000000 00123
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|.+.+.+++ +++.|.-..-+.......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++
T Consensus 107 ~E~~~l~~l~----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 181 (355)
T 1vzo_A 107 TERQVLEHIR----QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS-QRERFTEHEVQIYVGEIVLALEHLHKLGII 181 (355)
T ss_dssp CHHHHHHHHH----TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcc----CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 4555555554 23332211111122345689999999999988743 234577777766666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 182 H~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 182 YRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp CCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred cCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999974 59999999764
No 262
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=98.99 E-value=1e-09 Score=131.04 Aligned_cols=149 Identities=19% Similarity=0.212 Sum_probs=100.9
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
+...+.+.|... +.||.|++|+||+|+. .+|+.||||+........- +
T Consensus 48 ~~~~~~~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~----------------------------~- 96 (348)
T 1u5q_A 48 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN----------------------------E- 96 (348)
T ss_dssp CCSCHHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHH----------------------------H-
T ss_pred cccchhhheeee--eEEccCCCEEEEEEEEccCCeEEEEEEEccccccch----------------------------H-
Confidence 344566666665 6799999999999995 5899999999864321100 0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
..-++.+|++.+.+++ +...+.+-.++. .....+|||||++| .+.+........++...+...+.+++
T Consensus 97 -----~~~~~~~E~~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~ 165 (348)
T 1u5q_A 97 -----KWQDIIKEVRFLQKLR----HPNTIQYRGCYL-REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQ 165 (348)
T ss_dssp -----HHHHHHHHHHHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHhCC----CCCEeeEEEEEE-ECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 0012456666665553 333233333332 23456899999987 45554333445677777766666655
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 166 aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 202 (348)
T 1u5q_A 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202 (348)
T ss_dssp HHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCB
T ss_pred HHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCce
Confidence 7889999999999999999964 69999999764
No 263
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.99 E-value=7.7e-10 Score=128.24 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+..+ +..||||+........ ..-.+.
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~------------------------------------~~~~~~ 74 (298)
T 3f66_A 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------------------------------------EVSQFL 74 (298)
T ss_dssp EEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHH------------------------------------HHHHHH
T ss_pred ceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHH------------------------------------HHHHHH
Confidence 689999999999999653 2368999876422110 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +...+.+-.++.+-....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 75 ~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~ 150 (298)
T 3f66_A 75 TEGIIMKDFS----HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFV 150 (298)
T ss_dssp HHHHHHHTCC----CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5666555542 333344444433334556899999999999887543344567777766665655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 151 H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 151 HRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred CCCCchheEEECCCCCEEECcccccc
Confidence 999999999965 59999999764
No 264
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=98.99 E-value=1.6e-09 Score=126.22 Aligned_cols=140 Identities=18% Similarity=0.138 Sum_probs=95.0
Q ss_pred CCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 407 DENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 407 d~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
..+.||.|++|.||+|+. +|+.||||+..+.....-. +.. -.+.+|
T Consensus 35 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~---------------------------~~~------~~~~~E 80 (307)
T 2nru_A 35 GGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE---------------------------ELK------QQFDQE 80 (307)
T ss_dssp TCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTT---------------------------THH------HHHHHH
T ss_pred cCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchH---------------------------HHH------HHHHHH
Confidence 347899999999999986 7899999998754321000 000 124556
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++.+.++. +..-+.+-.++ ......+|||||++|.+|.+...... ..++...+...+.+++ +..+|..|++
T Consensus 81 ~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~ 155 (307)
T 2nru_A 81 IKVMAKCQ----HENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155 (307)
T ss_dssp HHHHHHCC----CTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhcC----CCCeEEEEEEE-ecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 66665552 22222222222 22345689999999999988754222 2366666666655555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 156 H~dlkp~Nili~~~~~~kl~Dfg~~~ 181 (307)
T 2nru_A 156 HRDIKSANILLDEAFTAKISDFGLAR 181 (307)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred cCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999999999965 58999999653
No 265
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=98.99 E-value=7.7e-10 Score=131.91 Aligned_cols=139 Identities=22% Similarity=0.196 Sum_probs=95.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.......
T Consensus 20 ~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------------------------------------ 61 (342)
T 2qr7_A 20 FTDGYEVK--EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------------------------------------ 61 (342)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------------------------------------
T ss_pred ccccEEEE--EEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------------------------------------
Confidence 44555544 68999999999999975 7999999998643210
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
...|.+.+.++. .+...+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..
T Consensus 62 -----~~~E~~~l~~~~---~hp~iv~~~~~~~-~~~~~~lv~E~~~gg~L~~~i~-~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 62 -----PTEEIEILLRYG---QHPNIITLKDVYD-DGKYVYVVTELMKGGELLDKIL-RQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----CHHHHHHHHHHT---TSTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-TCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----hHHHHHHHHHhc---CCCCcCeEEEEEE-cCCEEEEEEeCCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHH
Confidence 123333343332 2222233333332 2345589999999999887642 234467776666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 9999999999999999952 38999999764
No 266
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.99 E-value=1.6e-09 Score=124.50 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=96.7
Q ss_pred cccccccceEEEEEEecC----CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE----GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~----G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+..+ ++.||||+.++..... ..-.|.
T Consensus 18 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~ 61 (281)
T 3cc6_A 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD------------------------------------NKEKFM 61 (281)
T ss_dssp EEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHH------------------------------------HHHHHH
T ss_pred EEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCch------------------------------------HHHHHH
Confidence 689999999999998642 3469999987642110 011346
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++. ....++||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 62 ~E~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 135 (281)
T 3cc6_A 62 SEAVIMKNLD----HPHIVKLIGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135 (281)
T ss_dssp HHHHHHHHHC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCcceEEEEEc--CCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 6777777663 333333334432 2456899999999999887543344577777766666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 136 H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 136 HRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred cCCCccceEEECCCCcEEeCccCCCc
Confidence 999999999964 59999999764
No 267
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=98.99 E-value=7e-10 Score=127.46 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+...... ..+-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~e~ 60 (279)
T 3fdn_A 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA----------------------------------GVEHQLRREV 60 (279)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHH----------------------------------TCHHHHHHHH
T ss_pred eEEecCCCeEEEEEEEccCCcEEEEEEEeccccchh----------------------------------hHHHHHHHHH
Confidence 68999999999999865 688999999865321110 0011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ...+..++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~l~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d 134 (279)
T 3fdn_A 61 EIQSHLR----HPNILRLYGYF-HDATRVYLILEYAPLGTVYRELQ-KLSKFDEQRTATYITELANALSYCHSKRVIHRD 134 (279)
T ss_dssp HHHTTCC----CTTBCCEEEEE-ECSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECC
T ss_pred HHHHcCC----CCCCcchhheE-ecCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCEeccc
Confidence 5554432 22222222222 23355689999999999887643 234577776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
+||.|||+. .++++|||..
T Consensus 135 lkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 135 IKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp CCGGGEEECTTSCEEECSCCEE
T ss_pred CChHhEEEcCCCCEEEEecccc
Confidence 999999964 5999999965
No 268
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.99 E-value=5.8e-10 Score=129.23 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-... +..|.+
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~----------------------------------------~~~e~~ 52 (301)
T 3q4u_A 14 ECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKS----------------------------------------WFRETE 52 (301)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHH----------------------------------------HHHHHH
T ss_pred EeeccCCCcEEEEEEE-CCEEEEEEEeccccchh----------------------------------------hHHHHH
Confidence 6799999999999987 79999999986542211 112222
Q ss_pred HHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH------
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF------ 557 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~------ 557 (1578)
.+.... +.+...+.+-..... ....-+|||||++|.+|.++. ....++...+...+.++. +..+|
T Consensus 53 ~~~~~~--l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 128 (301)
T 3q4u_A 53 LYNTVM--LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGT 128 (301)
T ss_dssp HHHHTC--CCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHH--TTCCBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHhh--ccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHH--hhcccCHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 222111 222222222222111 122357999999999998874 456778777777766665 78889
Q ss_pred --HcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 558 --QTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
..|++|+|++|.|||+. .++++|||..
T Consensus 129 ~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp TCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 89999999999999965 5899999975
No 269
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=98.99 E-value=1.1e-09 Score=135.45 Aligned_cols=144 Identities=16% Similarity=0.167 Sum_probs=98.1
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ .
T Consensus 9 ~~~~Y~i~--~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~--~-------------------------------- 52 (444)
T 3soa_A 9 FTEEYQLF--EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--R-------------------------------- 52 (444)
T ss_dssp HHHHEEEE--EEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHH--H--------------------------------
T ss_pred ccCCeEEE--EEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCH--H--------------------------------
Confidence 34445544 67999999999999864 89999999986432110 0
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
..-.+.+|++.+.++. +..-+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..
T Consensus 53 -~~~~~~~E~~il~~l~----hpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~i~-~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 53 -DHQKLEREARICRLLK----HPNIVRLHDSIS-EEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp -HHHHHHHHHHHHHHCC----BTTBCCEEEEEE-CSSEEEEEECCCBCCBHHHHHH-HCSCCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCC----CcCCCeEEEEEE-ECCEEEEEEEeCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHH
Confidence 0112456776666552 333344434432 3355689999999999977643 334577777766666665 788
Q ss_pred HHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|..|++|+|+||.|||+. .++++|||...
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999999964 48999999763
No 270
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.99 E-value=5.2e-10 Score=133.42 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=98.8
Q ss_pred cccccccceEEEEEEec---------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK---------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~---------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+.||.|++|.||+|+.. +|+.||||+.... ..+..++.+++.+
T Consensus 48 ~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--~~~~~E~~~l~~l-------------------------- 99 (352)
T 2jii_A 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--GRLFNEQNFFQRA-------------------------- 99 (352)
T ss_dssp EEEEEETTEEEEEEEECC-----------CEEEEEEETT--STHHHHHHHHHHH--------------------------
T ss_pred EEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--chHHHHHHHHHHh--------------------------
Confidence 68999999999999976 3899999998754 2222232222211
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--H
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l 553 (1578)
+ -.|..++...+...+.+.+|+++... ....+|||||+ |.+|.++..-. ...++...+...+.+++ +
T Consensus 100 --~----h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L 172 (352)
T 2jii_A 100 --A----KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDAL 172 (352)
T ss_dssp --C----CHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred --c----ccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHH
Confidence 0 12333333444555556666665422 34568999999 99999875422 25688888777777766 7
Q ss_pred HHHHHcCccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
..+|..|++|+|++|.|||+. .++++|||....
T Consensus 173 ~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~ 210 (352)
T 2jii_A 173 EFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210 (352)
T ss_dssp HHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBC
T ss_pred HHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceee
Confidence 889999999999999999964 689999997643
No 271
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=98.99 E-value=6.8e-10 Score=129.62 Aligned_cols=137 Identities=16% Similarity=0.075 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... ..-.
T Consensus 33 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 76 (316)
T 2xir_A 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS------------------------------------EHRA 76 (316)
T ss_dssp EEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcH------------------------------------HHHH
Confidence 6899999999999984 367999999987543211 0013
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc---------------CCCHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK---------------GFSLADVDR 546 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~---------------~~~~~~v~~ 546 (1578)
+.+|++.+.++. +++. +.+-..+..-...-++||||++|.+|.++..-... .++...+..
T Consensus 77 ~~~E~~~l~~l~----~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 77 LMSELKILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHhcc----cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 456676776663 2332 33333333333346899999999999887432111 156666666
Q ss_pred HHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 547 KLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 547 ~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 196 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCcccc
Confidence 655555 7889999999999999999975 58999999764
No 272
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=98.98 E-value=1.1e-09 Score=129.50 Aligned_cols=148 Identities=13% Similarity=0.130 Sum_probs=99.9
Q ss_pred hhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHH
Q psy12972 400 SQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLE 478 (1578)
Q Consensus 400 ~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~ 478 (1578)
.+-|... +.||.|++|.||+|+.+ +|+.||||+.......... ....
T Consensus 10 ~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~------------- 57 (326)
T 2y0a_A 10 DDYYDTG--EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR-----------------RGVS------------- 57 (326)
T ss_dssp HHHEEEE--EEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS-----------------SSBC-------------
T ss_pred ccceEec--eEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc-----------------chhh-------------
Confidence 3344443 67999999999999975 7999999998654321100 0000
Q ss_pred HHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 479 QELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 479 ~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-++.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+
T Consensus 58 -~~~~~~E~~~l~~l~----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~l 130 (326)
T 2y0a_A 58 -REDIEREVSILKEIQ----HPNVITLHEVY-ENKTDVILILELVAGGELFDFLA-EKESLTEEEATEFLKQILNGVYYL 130 (326)
T ss_dssp -HHHHHHHHHHHHHCC----CTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHT-TSSCCBHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCC----CCCCCcEEEEE-EeCCEEEEEEEcCCCCCHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHH
Confidence 112456666666553 22223333333 23455689999999999988743 234567777766666665 7889
Q ss_pred HHcCccccCCCCCCCCCC-------eeEEecCCchhh
Q psy12972 557 FQTGFVHADPHSGNDVNT-------WLYPVDLGDKFR 586 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~-------~v~liDfG~~~~ 586 (1578)
|..|++|+|++|.|||+. .++++|||....
T Consensus 131 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 167 (326)
T 2y0a_A 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167 (326)
T ss_dssp HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence 999999999999999963 489999997643
No 273
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.54 E-value=4.7e-11 Score=121.32 Aligned_cols=91 Identities=21% Similarity=0.177 Sum_probs=79.0
Q ss_pred CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECc--cchhhHhHcCccccCCcEEEE--cCCcc--
Q psy12972 871 SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVH--NEQGLARRLGVGSQLPQIALL--TDGRT-- 941 (1578)
Q Consensus 871 s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~--~~~~L~~k~gV~~~~PTl~lf--~~G~~-- 941 (1578)
..+++++|.||++||++|+.+.|.+ +++++.+.+. +.++.||++ .+.+++++|+|.+ +||+++| ++|+.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~~v~~-~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEAR-FVVASVSVDTPEGQELARRYRVPG-TPTFVFLVPKAGAWEE 94 (130)
Confidence 3468999999999999999999999 8999888764 899999994 5688999999998 9999999 67887
Q ss_pred ccccCCCCCHHHHHHHHHhhCC
Q psy12972 942 SFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 942 ~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
...+.|..+.+.|.+++.+.+.
T Consensus 95 ~~~~~G~~~~~~l~~~l~~~~~ 116 (130)
T 2lst_A 95 VGRLFGSRPRAEFLKELRQVCV 116 (130)
Confidence 6666788899999999987763
No 274
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=98.98 E-value=1e-09 Score=133.56 Aligned_cols=137 Identities=16% Similarity=0.098 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- .+ . -.+..|.
T Consensus 58 ~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~~-------------------~--------------~~~~~E~ 103 (396)
T 4dc2_A 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-ED-------------------I--------------DWVQTEK 103 (396)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC------------------------C--------------CHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HH-------------------H--------------HHHHHHH
Confidence 68999999999999976 689999999875432110 00 0 0123444
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++. |.+-..+ .-...-+|||||++|..|.+... ....++...+...+.+++ +..+|..|++||
T Consensus 104 ~il~~~~----~hp~Iv~l~~~~-~~~~~~~lV~E~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~givHr 177 (396)
T 4dc2_A 104 HVFEQAS----NHPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEISLALNYLHERGIIYR 177 (396)
T ss_dssp HHHHHHT----TCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCC
T ss_pred HHHHhcC----CCCCcCeeEEEE-EECCEEEEEEEcCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEec
Confidence 4444432 2333 2222222 22345689999999999977643 334677776666665555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 178 DLKp~NILl~~~g~ikL~DFGla~ 201 (396)
T 4dc2_A 178 DLKLDNVLLDSEGHIKLTDYGMCK 201 (396)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCB
T ss_pred cCCHHHEEECCCCCEEEeecceee
Confidence 9999999964 59999999763
No 275
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=98.98 E-value=7e-10 Score=132.52 Aligned_cols=132 Identities=19% Similarity=0.167 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... -.+++|+
T Consensus 59 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------------------------------------~~~~~E~ 99 (349)
T 2w4o_A 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK---------------------------------------KIVRTEI 99 (349)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------------------------------------------C
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEeccchhH---------------------------------------HHHHHHH
Confidence 68999999999999976 6899999998653210 0134555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 100 ~~l~~l~----h~niv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~D 173 (349)
T 2w4o_A 100 GVLLRLS----HPNIIKLKEIF-ETPTEISLVLELVTGGELFDRIV-EKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173 (349)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHT-TCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHhCC----CCCCcceeeeE-ecCCeEEEEEEeCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 5565543 32223333333 23455689999999999987642 233467777766666665 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 174 ikp~NIll~~~~~~~~~kl~Dfg~a~ 199 (349)
T 2w4o_A 174 LKPENLLYATPAPDAPLKIADFGLSK 199 (349)
T ss_dssp CCGGGEEESSSSTTCCEEECCCC---
T ss_pred CCcccEEEecCCCCCCEEEccCcccc
Confidence 999999963 48999999764
No 276
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.98 E-value=2.1e-09 Score=124.34 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=93.2
Q ss_pred CcccccccceEEEEEEe---cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 408 ENPIAAASLAQVFRAVT---KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l---~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
.+.||.|++|.||+|.. .+|+.||||+.++..... .. .-.+.
T Consensus 22 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~------~~~~~ 66 (291)
T 1xbb_A 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-----------------------------AL------KDELL 66 (291)
T ss_dssp EEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----C-----------------------------HH------HHHHH
T ss_pred cCccccccCeeeEeeeecCCCceeeEEEEeecccccCH-----------------------------HH------HHHHH
Confidence 35899999999999964 357899999987542110 00 01245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.++ .....++||||++|.+|.++.. ....++...+...+.+++ +..+|..|++
T Consensus 67 ~e~~~l~~l----~h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 139 (291)
T 1xbb_A 67 AEANVMQQL----DNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLEESNFV 139 (291)
T ss_dssp HHHHHHHTC----CCTTBCCEEEEE--ESSSEEEEEECCTTEEHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhC----CCCCEEEEEEEE--CCCCcEEEEEeCCCCCHHHHHH-hCcCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 566555554 233323333333 2345689999999999988743 223477777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 140 H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 140 HRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp CSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cCCCCcceEEEeCCCcEEEccCCcce
Confidence 999999999964 58999999764
No 277
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=98.98 E-value=1.4e-09 Score=128.73 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEe--------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|+||+|+. .+|+.||||+.++..... + .
T Consensus 41 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~ 84 (334)
T 2pvf_A 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK---D---------------------------------L 84 (334)
T ss_dssp EEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHH---H---------------------------------H
T ss_pred eEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHH---H---------------------------------H
Confidence 7899999999999986 357899999987543211 0 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADV 544 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v 544 (1578)
-++.+|++.+.++. .++. +.+-..+ .....-+|||||++|.+|.++..-.. ..++...+
T Consensus 85 ~~~~~E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
T 2pvf_A 85 SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159 (334)
T ss_dssp HHHHHHHHHHHHHC----CCTTBCCEEEEE-CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHH
T ss_pred HHHHHHHHHHHHhh----cCCCEeeEEEEE-ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHH
Confidence 12456666666652 2332 2222222 22345689999999999988743211 13666666
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||....
T Consensus 160 ~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~ 206 (334)
T 2pvf_A 160 VSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccc
Confidence 66666655 7889999999999999999964 599999997643
No 278
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.98 E-value=8e-10 Score=132.99 Aligned_cols=135 Identities=18% Similarity=0.233 Sum_probs=88.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|+||+|+.. +|+.||||+........ ... -.+.+|+
T Consensus 31 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~E~ 75 (367)
T 1cm8_A 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSE-----------------------------LFA------KRAYREL 75 (367)
T ss_dssp EEC------CEEEEEETTTCCEEEEEECSSTTSSH-----------------------------HHH------HHHHHHH
T ss_pred EEeeecCCeEEEEEEECCCCCEEEEEEeCccccCH-----------------------------HHH------HHHHHHH
Confidence 68999999999999964 79999999875432110 000 1234556
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.+++ +...+.+-.++..-. +.-+|||||+ |..|.++. ....++...+...+.+++ +..+|..|
T Consensus 76 ~~l~~l~----hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 148 (367)
T 1cm8_A 76 RLLKHMR----HENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIHAAG 148 (367)
T ss_dssp HHHHHCC----BTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCC----CcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5565543 333344444443221 2348999999 77887763 345677777766666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+|||+. .++++|||...
T Consensus 149 ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 149 IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 99999999999965 59999999764
No 279
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=98.98 E-value=1.1e-09 Score=125.35 Aligned_cols=135 Identities=18% Similarity=0.127 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+..+.-.... .-.+.+|+
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~e~ 56 (276)
T 2yex_A 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDC------------------------------------PENIKKEI 56 (276)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTH------------------------------------HHHHHHHH
T ss_pred EEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhh------------------------------------hHHHHHHH
Confidence 67999999999999976 799999999865321100 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 57 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 130 (276)
T 2yex_A 57 CINKML----NHENVVKFYGHRR-EGNIQYLFLEYCSGGELFDRIE-PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRD 130 (276)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCTTEEGGGGSB-TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhc----CCCCceeeeeEEE-cCCEEEEEEEecCCCcHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccC
Confidence 444443 2222233323322 2344579999999999988743 223577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 131 l~p~Nil~~~~~~~kl~dfg~~~ 153 (276)
T 2yex_A 131 IKPENLLLDERDNLKISDFGLAT 153 (276)
T ss_dssp CSGGGEEECTTCCEEECCCTTCE
T ss_pred CChHHEEEccCCCEEEeeCCCcc
Confidence 999999964 59999999764
No 280
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=98.98 E-value=1.1e-09 Score=130.77 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=98.0
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+....-... .+...
T Consensus 22 ~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------------------~~~~~------------ 69 (351)
T 3c0i_A 22 FEDVYELC--EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTS------------------SPGLS------------ 69 (351)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHT------------------SSSCC------------
T ss_pred cccceEEe--eEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccc------------------cccch------------
Confidence 44555554 67999999999999965 79999999986432110 00001
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~-- 552 (1578)
.-++.+|++.+.++ .+...+.+-.++.+ ...-+|||||++|.+|.+...-.. ..++...+...+.+++
T Consensus 70 --~~~~~~E~~~l~~l----~hpnIv~~~~~~~~-~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~a 142 (351)
T 3c0i_A 70 --TEDLKREASICHML----KHPHIVELLETYSS-DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142 (351)
T ss_dssp --HHHHHHHHHHHHHC----CCTTBCCEEEEEEE-TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhC----CCCCCCcEEEEEEe-CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Confidence 11245666666554 23332333333322 345689999999999976543221 1356666666555555
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 143 l~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~ 181 (351)
T 3c0i_A 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI 181 (351)
T ss_dssp HHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred HHHHHHCCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence 7889999999999999999974 28999999764
No 281
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.98 E-value=8.3e-10 Score=131.84 Aligned_cols=126 Identities=13% Similarity=0.049 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+..-.. .-++..|+
T Consensus 41 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~e~ 82 (360)
T 3llt_A 41 RKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKY--------------------------------------TRSAKIEA 82 (360)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECSCHHH--------------------------------------HHHHHHHH
T ss_pred EEEcccCCeEEEEEEECCCCeEEEEEEeccchhh--------------------------------------hhhhHHHH
Confidence 68999999999999974 7999999998632110 01123455
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.++++...-..++. +.+-..+. .....+|||||+ |.+|.++..... .+++...+...+.+++ +..+|..|++|
T Consensus 83 ~~l~~l~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH 160 (360)
T 3llt_A 83 DILKKIQNDDINNNNIVKYHGKFM-YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTH 160 (360)
T ss_dssp HHHHHTCCCSTTGGGBCCEEEEEE-ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHhcccCCCCCCeecccceee-ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 555555421111222 22222222 234568999999 888887744222 2477777776666665 88899999999
Q ss_pred cCCCCCCCCCC
Q psy12972 564 ADPHSGNDVNT 574 (1578)
Q Consensus 564 ~DpHPGNilv~ 574 (1578)
+|+||.|||+.
T Consensus 161 rDlkp~NIll~ 171 (360)
T 3llt_A 161 TDLKPENILLD 171 (360)
T ss_dssp SCCSGGGEEES
T ss_pred CCCCcccEEEc
Confidence 99999999973
No 282
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=98.98 E-value=1.1e-09 Score=128.64 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.....- . ........++.+|+
T Consensus 16 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~---------------------------~~~~~~~~~~~~E~ 66 (322)
T 2ycf_A 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG--S---------------------------AREADPALNVETEI 66 (322)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECC--------------------------------------------CHHHHH
T ss_pred eEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhc--c---------------------------cccchhhhhHHHHH
Confidence 67999999999999965 789999999865421100 0 00001123456777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~~l~~l~----h~~i~~~~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~d 139 (322)
T 2ycf_A 67 EILKKLN----HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 139 (322)
T ss_dssp HHHHHCC----CTTBCCEEEEEE--SSSEEEEEECCTTEETHHHHS-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCCceEeeEEc--CCceEEEEecCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 7776652 333344444443 234689999999999987642 234567766666665555 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 140 lkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 140 LKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp CSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCeEEEccCccce
Confidence 999999974 28999999753
No 283
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.98 E-value=4.9e-10 Score=141.76 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=87.3
Q ss_pred cccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 404 RSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 404 ~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
..+..+.||.|++|+||+| ...|+.||+|+..+.....- .+-+.. ..-.|
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~-~~~~~~~~~k~~~~~~~~~~------------------------~~~~~~-----~~~~~ 386 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRD-SYLDFDVIIKERVKKGYRDE------------------------RLDENI-----RKSRT 386 (540)
T ss_dssp -----------CCEEEEEE-ECSSCEEEEEEECCCTTSCH------------------------HHHHHH-----HHHHH
T ss_pred cCCCCCEEeeCCCEEEEEE-EECCCeEEEEEEecccccch------------------------hhhhHH-----HHHHH
Confidence 3355679999999999999 45789999998765321110 000000 11246
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCccc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAFAEQIFQTGFVH 563 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~l~~i~~~G~vH 563 (1578)
.+|++.+.+++ ++.|..|..+.......+|||||++|.+|.++.. . ...++..+++. ++.+|..|++|
T Consensus 387 ~~E~~il~~l~-----h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~--~----~~~i~~qi~~a-L~~LH~~gIiH 454 (540)
T 3en9_A 387 AREARYLALVK-----DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIE--D----NLDIAYKIGEI-VGKLHKNDVIH 454 (540)
T ss_dssp HHHHHHHHHGG-----GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHST--T----CTHHHHHHHHH-HHHHHHTTEEC
T ss_pred HHHHHHHHhcC-----CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHH--H----HHHHHHHHHHH-HHHHHHCcCcc
Confidence 78888888874 3556666777666667799999999999988633 1 22344444443 78899999999
Q ss_pred cCCCCCCCCCC-eeEEecCCch
Q psy12972 564 ADPHSGNDVNT-WLYPVDLGDK 584 (1578)
Q Consensus 564 ~DpHPGNilv~-~v~liDfG~~ 584 (1578)
+|+||.|||+. .++++|||..
T Consensus 455 rDiKp~NILl~~~~kL~DFGla 476 (540)
T 3en9_A 455 NDLTTSNFIFDKDLYIIDFGLG 476 (540)
T ss_dssp TTCCTTSEEESSSEEECCCTTC
T ss_pred CCCCHHHEEECCeEEEEECccC
Confidence 99999999965 3555555543
No 284
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=98.97 E-value=1.2e-09 Score=125.94 Aligned_cols=135 Identities=14% Similarity=0.106 Sum_probs=93.6
Q ss_pred cccccccceEEEEEEec-CC-------CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EG-------VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQE 480 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G-------~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~E 480 (1578)
+.||.|++|.||+|+.. +| +.||||+....-... .
T Consensus 14 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~-------------------------------------~ 56 (289)
T 4fvq_A 14 ESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNY-------------------------------------S 56 (289)
T ss_dssp EEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGG-------------------------------------H
T ss_pred eeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHH-------------------------------------H
Confidence 67999999999999865 34 579999986532211 0
Q ss_pred HhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 481 LDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 481 lDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
-.|.+|++.+.++. +..-+.+-.++. .....+|||||++|.+|.++..-....++...+...+.+++ +..+|.
T Consensus 57 ~~~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 131 (289)
T 4fvq_A 57 ESFFEAASMMSKLS----HKHLVLNYGVCV-CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131 (289)
T ss_dssp HHHHHHHHHHHTSC----CTTBCCEEEEEC-CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC----CCCEeEEEEEEE-eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 12355665555543 322233333332 24556899999999999987553333477777666666655 788999
Q ss_pred cCccccCCCCCCCCCC---e--------eEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---W--------LYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~--------v~liDfG~~~ 585 (1578)
.|++|+|++|.|||+. . ++++|||...
T Consensus 132 ~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~ 169 (289)
T 4fvq_A 132 NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI 169 (289)
T ss_dssp TTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCT
T ss_pred CCeECCCcCcceEEEecCCcccccccceeeeccCcccc
Confidence 9999999999999963 2 7888888653
No 285
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=98.97 E-value=1.2e-09 Score=126.11 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=97.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+........ ..
T Consensus 20 i~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------~~----------- 64 (285)
T 3is5_A 20 IDDLFIFK--RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV----------------------PM----------- 64 (285)
T ss_dssp HHHHEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS----------------------CH-----------
T ss_pred hhhheeec--ceeccCCCeEEEEEEEccCCceEEEEEeeccccch----------------------hH-----------
Confidence 34445443 78999999999999965 79999999986542110 00
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+...- ....++...+...+.+++
T Consensus 65 ---~~~~~E~~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 136 (285)
T 3is5_A 65 ---EQIEAEIEVLKSL----DHPNIIKIFEVFE-DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136 (285)
T ss_dssp ---HHHHHHHHHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHhC----CCchHHhHHHhee-cCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHH
Confidence 1234555555554 2322233323332 23456899999999998876432 124577777666666655
Q ss_pred HHHHHHcCccccCCCCCCCCC------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++ +.++++|||...
T Consensus 137 L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp HHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred HHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 788999999999999999997 248999999764
No 286
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=98.97 E-value=1.3e-09 Score=124.94 Aligned_cols=134 Identities=19% Similarity=0.139 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+...... -.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~-------------------------------------~~~~~E~ 57 (277)
T 3f3z_A 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-------------------------------------DRFKQEI 57 (277)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCH-------------------------------------HHHHHHH
T ss_pred eEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchH-------------------------------------HHHHHHH
Confidence 57999999999999975 688999999865432210 0134566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-..+ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~d 131 (277)
T 3f3z_A 58 EIMKSL----DHPNIIRLYETF-EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLNVAHRD 131 (277)
T ss_dssp HHHHTC----CCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCEeeEEEEE-ecCCeEEEEEeccCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence 655554 222222222222 22345689999999999977643 334567777766666665 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCchh
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~~ 585 (1578)
++|.||++ . .++++|||...
T Consensus 132 lkp~Nil~~~~~~~~~~~l~Dfg~~~ 157 (277)
T 3f3z_A 132 LKPENFLFLTDSPDSPLKLIDFGLAA 157 (277)
T ss_dssp CSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred CCHHHEEEecCCCCCcEEEEecccce
Confidence 99999997 2 58999999764
No 287
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=98.97 E-value=1.9e-09 Score=123.55 Aligned_cols=149 Identities=19% Similarity=0.165 Sum_probs=99.4
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|..+++ |.-. +.||.|++|+||+|+. .+|+.||||+..+..... . +.
T Consensus 6 ~g~~~~~-y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~--------------------------~~ 54 (278)
T 3cok_A 6 IGEKIED-FKVG--NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK--A--------------------------GM 54 (278)
T ss_dssp HCSSGGG-EEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH--T--------------------------TC
T ss_pred ccccccc-ceee--eeecCCCceEEEEEEEccCCceEEEEEeehhhhhh--h--------------------------hH
Confidence 4555544 3333 6899999999999996 589999999986532110 0 00
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
.-.+.+|++.+.++ .+...+.+-..+ ......+|||||++|.+|.+...-....++...+...+.+++
T Consensus 55 ------~~~~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~ 123 (278)
T 3cok_A 55 ------VQRVQNEVKIHCQL----KHPSILELYNYF-EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT 123 (278)
T ss_dssp ------HHHHHHHHHHHTTB----CCTTBCCEEEEE-ECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHhC----CCCCeEeEEEEE-ccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 01234555544443 232223332333 223456899999999999877442234577777766666665
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.||++. .++++|||...
T Consensus 124 ~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~ 160 (278)
T 3cok_A 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLAT 160 (278)
T ss_dssp HHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCE
T ss_pred HHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeeccee
Confidence 7889999999999999999964 58999999754
No 288
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=98.97 E-value=1.2e-09 Score=132.65 Aligned_cols=137 Identities=20% Similarity=0.126 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... . .-.+.+|+
T Consensus 15 ~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~---------------------------------~~~~~~E~ 58 (396)
T 4eut_A 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---P---------------------------------VDVQMREF 58 (396)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS---C---------------------------------HHHHHHHH
T ss_pred EEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc---h---------------------------------HHHHHHHH
Confidence 57999999999999976 69999999986432110 0 00124566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-ceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-TRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+-.++.+... ..+|||||++|.+|.++..... .+++...+...+.+++ +..+|..|++
T Consensus 59 ~~l~~l~----hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 134 (396)
T 4eut_A 59 EVLKKLN----HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134 (396)
T ss_dssp HHHHHCC----CTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHhcC----CCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 6665553 3333333334433322 4589999999999988744222 2377777777666666 7889999999
Q ss_pred ccCCCCCCCCC----C---eeEEecCCchh
Q psy12972 563 HADPHSGNDVN----T---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv----~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+ . .++++|||...
T Consensus 135 H~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999996 2 37889999763
No 289
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=98.97 E-value=1.9e-09 Score=124.86 Aligned_cols=143 Identities=16% Similarity=0.119 Sum_probs=97.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++.-..... . .-.....+ .+.+|+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---------------------~-~~~~~~~~------~~~~e~ 74 (298)
T 1phk_A 23 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFS---------------------A-EEVQELRE------ATLKEV 74 (298)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCC---------------------H-HHHHHHHH------HHHHHH
T ss_pred eeecCCCceEEEEEEEcCcCceEEEEEEecccccccC---------------------H-HHHHHHHH------HHHHHH
Confidence 68999999999999975 7999999998754321100 0 00111111 235566
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +++. +.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 75 ~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 148 (298)
T 1phk_A 75 DILRKVS----GHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLT-EKVTLSEKETRKIMRALLEVICALHKLNIVHR 148 (298)
T ss_dssp HHHHHHT----TCTTBCCEEEEE-ECSSEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHHhc----CCCCEeeeeeee-ccCCeEEEEEeccCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 6666653 2232 3333333 22345689999999999988743 234677777766666665 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||++. .++++|||...
T Consensus 149 dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 149 DLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp CCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCCcceEEEcCCCcEEEecccchh
Confidence 9999999964 58999999764
No 290
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.97 E-value=1.8e-09 Score=125.96 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-..... ... ..++.+|.
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~~~---------------~~~~~~e~ 62 (308)
T 3g33_A 15 AEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG-----------------GGL---------------PISTVREV 62 (308)
T ss_dssp EEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTS-----------------SCC---------------CHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEecccccccc-----------------ccc---------------chhHHHHH
Confidence 6799999999999996 58999999998643211000 000 01223445
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.++++.. +.+...+.+-.++....+ .-+|||||++| .|.+..... ..+++...+...+.+++ +..+|..|
T Consensus 63 ~~l~~l~~-~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 140 (308)
T 3g33_A 63 ALLRRLEA-FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 140 (308)
T ss_dssp HHHHHHHH-HCCTTBCCEEEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhh-cCCCCeEEeeeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 55555543 233333444444433222 24799999987 666653211 12377777766666665 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|+||+|||+. .++++|||...
T Consensus 141 ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 168 (308)
T 3g33_A 141 IVHRDLKPENILVTSGGTVKLADFGLAR 168 (308)
T ss_dssp CCCSCCCTTTEEECTTSCEEECSCSCTT
T ss_pred cccCCCCHHHEEEcCCCCEEEeeCcccc
Confidence 99999999999964 58999999764
No 291
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=98.97 E-value=6.4e-10 Score=128.80 Aligned_cols=136 Identities=18% Similarity=0.096 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+......- . .-.+.+|+
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~------~~~~~~E~ 52 (292)
T 3o0g_A 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------------------------V------PSSALREI 52 (292)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTT-----------------------------H------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCC-----------------------------c------chHHHHHH
Confidence 57999999999999975 799999999865322110 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+..-+.+-.++. ....-+|||||++|..+..+ ......++...+...+.+++ +..+|..|++|+|
T Consensus 53 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~l~~~~-~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~d 126 (292)
T 3o0g_A 53 CLLKEL----KHKNIVRLHDVLH-SDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126 (292)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHH-HHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHhcC----CCCCEeeEEeEEE-eCCEEEEEEecCCCCHHHHH-HhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 555444 2333233333332 23456899999988443332 22235677777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 127 ikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 127 LKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CCHHHEEEcCCCCEEEeecccce
Confidence 999999964 58999999764
No 292
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=98.97 E-value=8.1e-10 Score=132.00 Aligned_cols=149 Identities=14% Similarity=0.172 Sum_probs=99.3
Q ss_pred hCCChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHH
Q psy12972 395 FGCTHSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINEL 473 (1578)
Q Consensus 395 lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~ 473 (1578)
.|.-..+-|... +.||.|++|.||+|+.. +|+.||||+.+.......
T Consensus 27 ~~~~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~------------------------------ 74 (360)
T 3eqc_A 27 VGELKDDDFEKI--SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI------------------------------ 74 (360)
T ss_dssp CCCCCGGGEEEE--EEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHH------------------------------
T ss_pred ccccccccceee--eeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHH------------------------------
Confidence 344344445554 67999999999999976 799999999876532210
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH-
Q psy12972 474 KVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 474 ~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~- 552 (1578)
. -.+.+|++.+.++ .+...+.+-..+. .....+|||||++|.+|.++.. ....++...+...+.+++
T Consensus 75 ~------~~~~~E~~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~~i~~ 142 (360)
T 3eqc_A 75 R------NQIIRELQVLHEC----NSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIK 142 (360)
T ss_dssp H------HHHHHHHGGGGGC----CCTTBCCEEEEEE-ETTEEEEEECCCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHH
T ss_pred H------HHHHHHHHHHHHC----CCCCEEEEeEEEE-ECCEEEEEEECCCCCCHHHHHH-HcCCCCHHHHHHHHHHHHH
Confidence 0 1124444444433 2222233323322 2345689999999999988753 234567666666555555
Q ss_pred -HHHHHH-cCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 -AEQIFQ-TGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 -l~~i~~-~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+..+|. +|++|+|+||.|||+. .++++|||....+
T Consensus 143 ~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 182 (360)
T 3eqc_A 143 GLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182 (360)
T ss_dssp HHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred HHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence 677887 4999999999999964 5999999987544
No 293
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.96 E-value=1.8e-09 Score=128.27 Aligned_cols=136 Identities=16% Similarity=0.146 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|...+|+.||||+........- ..-.+.+|++
T Consensus 15 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 59 (343)
T 3dbq_A 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ-----------------------------------TLDSYRNEIA 59 (343)
T ss_dssp EEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHH-----------------------------------HHHHHHHHHH
T ss_pred EEEecCCCeEEEEEEeCCCCEEEEEEeeccccchH-----------------------------------HHHHHHHHHH
Confidence 68999999999999999999999999864321100 0013466777
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++.+ +.+. |++++. .....-+||||+ .|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 60 ~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~e~-~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHr 132 (343)
T 3dbq_A 60 YLNKLQQ---HSDK--IIRLYDYEITDQYIYMVMEC-GNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 132 (343)
T ss_dssp HHHHHTT---TCTT--BCCEEEEEECSSEEEEEECC-CSEEHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHhhhh---cCCc--eEEEeeeEeeCCEEEEEEeC-CCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 7777653 1122 233332 223445799995 4667777643 234577776666666655 788999999999
Q ss_pred CCCCCCCCCC--eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 133 Dikp~NIll~~~~~kl~DFG~a~~ 156 (343)
T 3dbq_A 133 DLKPANFLIVDGMLKLIDFGIANQ 156 (343)
T ss_dssp CCCGGGEEEETTEEEECCCSSSCC
T ss_pred CCCcceEEEECCcEEEeecccccc
Confidence 9999999964 699999997643
No 294
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.96 E-value=1e-09 Score=134.91 Aligned_cols=137 Identities=15% Similarity=0.122 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+....... ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 76 (432)
T 3n9x_A 32 HLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI-----------------------------------DCKRILREI 76 (432)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHH-----------------------------------HHHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChH-----------------------------------HHHHHHHHH
Confidence 68999999999999965 789999999865332110 011235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+-.++.... ..-+|||||++| .|.++.. ....++...+...+.+++ ++.+|..|+
T Consensus 77 ~~l~~l~----h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~gi 150 (432)
T 3n9x_A 77 TILNRLK----SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFK-TPIFLTEEHIKTILYNLLLGENFIHESGI 150 (432)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCTTTCCCEEEEEECCSE-EHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHcC----CCCcceEEEEEecCCCCcCCeEEEEEecCCc-CHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 6666653 333333333332221 345899999976 6665532 223477777776666666 889999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||+|||+. .++++|||....
T Consensus 151 vHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 151 IHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 9999999999965 599999997643
No 295
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=127.79 Aligned_cols=136 Identities=15% Similarity=0.059 Sum_probs=95.6
Q ss_pred cccccccceEEEEEEe-----cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVT-----KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-----~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|+||+|+. .+|+.||||+.++..... .-.+
T Consensus 47 ~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~ 89 (326)
T 2w1i_A 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH-------------------------------------LRDF 89 (326)
T ss_dssp EEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHH-------------------------------------HHHH
T ss_pred eeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHH-------------------------------------HHHH
Confidence 6799999999999983 479999999987642210 0124
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
.+|++.+.++. +...+.+-.++.... ..-+|||||++|.+|.++..-....++...+...+.+++ +..+|..|
T Consensus 90 ~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 90 EREIEILKSLQ----HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHTCC----CTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCC----CCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 55666665542 332233333332221 245799999999999987543334577777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 99999999999964 69999999764
No 296
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.96 E-value=7.7e-10 Score=133.35 Aligned_cols=128 Identities=14% Similarity=0.074 Sum_probs=84.5
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.+..-.. .-.+.+|+
T Consensus 43 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~ 84 (397)
T 1wak_A 43 RKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY--------------------------------------TETALDEI 84 (397)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------------HHHHHHHH
T ss_pred EEeeecCCeeEEEEEecCCCeEEEEEEEecCCcc--------------------------------------hHHHHHHH
Confidence 5799999999999985 47999999998643110 01235667
Q ss_pred HHHHHHHHhhCCCC-CeeecEEeeCC------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLP-YVYIPRILWDK------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~-~v~vP~v~~~~------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.+++......+ ...|.+++..+ ...-+|||||+.|..+..+......+++...+...+.+++ +..+|.
T Consensus 85 ~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~ 164 (397)
T 1wak_A 85 RLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT 164 (397)
T ss_dssp HHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77777764321111 11233333221 2345799999966555444322224577777777666666 788999
Q ss_pred c-CccccCCCCCCCCCC
Q psy12972 559 T-GFVHADPHSGNDVNT 574 (1578)
Q Consensus 559 ~-G~vH~DpHPGNilv~ 574 (1578)
. |++|+|+||+|||+.
T Consensus 165 ~~givHrDikp~NIll~ 181 (397)
T 1wak_A 165 KCRIIHTDIKPENILLS 181 (397)
T ss_dssp TTCEECCCCSGGGEEEC
T ss_pred hCCEecCCCCHHHeeEe
Confidence 8 999999999999974
No 297
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=98.96 E-value=2e-09 Score=125.94 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=92.8
Q ss_pred CcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|.||+|+. .+|+.||||+....-... .-.+.+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E 60 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-------------------------------------RSRVFRE 60 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCC-------------------------------------HHHHHHH
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchh-------------------------------------HHHHHHH
Confidence 46799999999999995 489999999986431110 0112445
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
++.+.++ ..+..-+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+
T Consensus 61 ~~~l~~~---~~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~ 135 (316)
T 2ac3_A 61 VEMLYQC---QGHRNVLELIEFFE-EEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKGIAHR 135 (316)
T ss_dssp HHHHHHT---CCCTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHh---cCCCCeeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCceeC
Confidence 5554443 12222233333332 2345689999999999988743 234577776666666555 788999999999
Q ss_pred CCCCCCCCCC---e---eEEecCCchhhh
Q psy12972 565 DPHSGNDVNT---W---LYPVDLGDKFRL 587 (1578)
Q Consensus 565 DpHPGNilv~---~---v~liDfG~~~~l 587 (1578)
|++|.|||+. . ++++|||....+
T Consensus 136 dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 136 DLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp CCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred CCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 9999999964 2 899999976443
No 298
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.96 E-value=2.1e-10 Score=113.11 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=76.8
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh----hHhHcCccccCCcEE
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG----LARRLGVGSQLPQIA 934 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~----L~~k~gV~~~~PTl~ 934 (1578)
|.++|++.+ +.++|++|.|+|+|||+|+.+.|.|+++++. + ++.+++||.+++++ +|.++||+...||++
T Consensus 13 s~e~f~~ii---~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~-~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i 86 (112)
T 3iv4_A 13 SIDQFEQVI---EENKYVFVLKHSETCPISANAYDQFNKFLYE--R-DMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF 86 (112)
T ss_dssp SHHHHHHHH---HHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--H-TCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE
T ss_pred CHHHHHHHH---hcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--C-CceEEEEEeecCchhhHHHHHHhCCccCCCeEE
Confidence 556787765 2389999999999999999999999999985 2 38999999999876 899999992289999
Q ss_pred EEcCCccccc-cCCCCCHHHHHHHH
Q psy12972 935 LLTDGRTSFF-KEPSFSVQKMVEFF 958 (1578)
Q Consensus 935 lf~~G~~~~y-~~G~~s~~~L~~fi 958 (1578)
+|++|+.+.. ..+..+.+.|.+.+
T Consensus 87 l~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 87 YFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEECCEEEEEeeccccCHHHHHHhh
Confidence 9999987633 33667777777654
No 299
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.96 E-value=1.7e-09 Score=128.00 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=90.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+.++....... .++..|.
T Consensus 57 ~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~~e~ 100 (340)
T 3an0_A 57 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ------------------------------------KRLLMDL 100 (340)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHH------------------------------------HHHHHHH
T ss_pred eEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHH------------------------------------HHHHHHH
Confidence 5799999999999996 58999999998765332100 0111222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHc-Cc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQT-GF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~-G~ 561 (1578)
..+ ...+.+...+.+-..+. .....+|||||++| +|.++... ....++...+...+.+++ +..+|.. |+
T Consensus 101 ~~~---~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~i 175 (340)
T 3an0_A 101 DIS---MRTVDCPFTVTFYGALF-REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175 (340)
T ss_dssp HHH---HTTCCCTTTCCEEEEEE-CSSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHH---HhhcCCCcEEEEeeEEE-eCCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 111 11222333333333332 23567899999998 77765331 234577776666666665 7888987 99
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 176 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 176 IHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp CCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred ecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999999999964 699999997644
No 300
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=98.96 E-value=1.2e-09 Score=125.95 Aligned_cols=134 Identities=19% Similarity=0.155 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+++... .-.+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~E~ 60 (288)
T 3kfa_A 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 60 (288)
T ss_dssp EESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTH--------------------------------------HHHHHHHH
T ss_pred eecCCCCceeEEEeEecCCCEEEEEEecCcCHHH--------------------------------------HHHHHHHH
Confidence 67999999999999976 5899999998653211 01235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.+++ +...+.+-.++ ......++||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 61 ~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~ 135 (288)
T 3kfa_A 61 AVMKEIK----HPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135 (288)
T ss_dssp HHHHHCC----CTTBCCEEEEE-CSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHhCC----CCCEeeEEEEE-ccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCC
Confidence 6666653 22223333333 2234568999999999998874321 23366666666555555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 136 dikp~Nil~~~~~~~~l~Dfg~~~ 159 (288)
T 3kfa_A 136 DLAARNCLVGENHLVKVADFGLSR 159 (288)
T ss_dssp CCSGGGEEECGGGCEEECCCCGGG
T ss_pred CCCcceEEEcCCCCEEEccCccce
Confidence 9999999975 58999999764
No 301
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=98.96 E-value=1e-09 Score=100.68 Aligned_cols=73 Identities=22% Similarity=0.360 Sum_probs=64.0
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCC-CHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF-SVQKMV 955 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~-s~~~L~ 955 (1578)
.|.||++||++|+.+.|.++++++.+.+. +.++.|| +.+++++|+|.+ +||+++ +|+.... |.. +.++|.
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~-~~~~~v~---~~~~~~~~~v~~-~Pt~~~--~G~~~~~--G~~~~~~~l~ 73 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGID-AEFEKIK---EMDQILEAGLTA-LPGLAV--DGELKIM--GRVASKEEIK 73 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCC-EEEEEEC---SHHHHHHHTCSS-SSCEEE--TTEEEEC--SSCCCHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCc-eEEEEec---CHHHHHHCCCCc-CCEEEE--CCEEEEc--CCCCCHHHHH
Confidence 58999999999999999999999998764 8999998 789999999998 999998 8876544 777 888888
Q ss_pred HHH
Q psy12972 956 EFF 958 (1578)
Q Consensus 956 ~fi 958 (1578)
+++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 875
No 302
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.96 E-value=7.3e-10 Score=127.22 Aligned_cols=134 Identities=18% Similarity=0.130 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+.++.... -.|.+|++
T Consensus 27 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~---------------------------------------~~~~~E~~ 66 (278)
T 1byg_A 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA---------------------------------------QAFLAEAS 66 (278)
T ss_dssp EEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----------------------------------------HHHHHTHH
T ss_pred eEEecCCCceEEEEEE-cCCEEEEEEecchhHH---------------------------------------HHHHHHHH
Confidence 6899999999999986 5999999998643110 02345555
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++ .+...+.+-..+.+-...-++||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~l~~l----~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 142 (278)
T 1byg_A 67 VMTQL----RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142 (278)
T ss_dssp HHTTC----CCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhC----CCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccC
Confidence 55444 233334444444333345689999999999988754221 1256666666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 143 lkp~Nil~~~~~~~~l~Dfg~~~~ 166 (278)
T 1byg_A 143 LAARNVLVSEDNVAKVSDFGLTKE 166 (278)
T ss_dssp CSGGGEEECTTSCEEECCCCC---
T ss_pred CCcceEEEeCCCcEEEeecccccc
Confidence 999999964 589999997643
No 303
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=98.96 E-value=8.8e-10 Score=131.15 Aligned_cols=136 Identities=16% Similarity=0.107 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+. .+|+.||||+........- . . .-.+.+|+
T Consensus 15 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-------------------~---------~------~~~~~~E~ 60 (336)
T 3h4j_B 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKS-------------------D---------M------HMRVEREI 60 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHT-------------------T---------C------SHHHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEehHHccch-------------------h---------H------HHHHHHHH
Confidence 6899999999999996 5899999999864321100 0 0 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-+.+-.++. ..+..+|||||++ ..+.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 61 ~~l~~l~----hpnIv~l~~~~~-~~~~~~lv~E~~~-g~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~D 133 (336)
T 3h4j_B 61 SYLKLLR----HPHIIKLYDVIT-TPTDIVMVIEYAG-GELFDYIV-EKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRD 133 (336)
T ss_dssp HHHTTCC----CTTBCCEEEEEE-CSSEEEEEECCCC-EEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHhCC----CCCCCeEEEEEE-eCCEEEEEEECCC-CcHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 5554442 322233333332 3345689999995 45555432 345677777766666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 134 lkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 134 LKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp CSTTTEEECTTCCEEECCSSCTB
T ss_pred CchhhEEEcCCCCEEEEEeccce
Confidence 999999965 59999999764
No 304
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=98.95 E-value=1.4e-09 Score=130.62 Aligned_cols=149 Identities=13% Similarity=0.093 Sum_probs=99.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.+........ .....
T Consensus 9 ~~~~~y~~~--~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~-----------------~~~~~---------- 59 (361)
T 2yab_A 9 KVEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVCR---------- 59 (361)
T ss_dssp CGGGTEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBCH----------
T ss_pred ChhhceEEe--eEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc-----------------chhHH----------
Confidence 344555444 67999999999999976 7999999998764321100 00000
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-.+.+|++.+.++. +...+.+-.++. ....-+|||||++|.+|.++.. ....++...+...+.+++ +.
T Consensus 60 ----~~~~~E~~il~~l~----hpnIv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~ 129 (361)
T 2yab_A 60 ----EEIEREVSILRQVL----HPNIITLHDVYE-NRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVN 129 (361)
T ss_dssp ----HHHHHHHHHHTTCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHT-TCSCCBHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhCC----CcCCCcEEEEEE-eCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 12345555554442 322233333332 2345689999999999988643 234567777776666665 78
Q ss_pred HHHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp HHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred HHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 89999999999999999852 48999999764
No 305
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=98.95 E-value=1.4e-09 Score=127.78 Aligned_cols=139 Identities=17% Similarity=0.144 Sum_probs=88.5
Q ss_pred cccccccceEEEEEEecC-C---CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTKE-G---VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~-G---~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+... + ..||||+.++.....- ..-.+.
T Consensus 29 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~ 73 (323)
T 3qup_A 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS-----------------------------------DIEEFL 73 (323)
T ss_dssp EEEEEETTEEEEEEEC-------CEEEEEEC------CH-----------------------------------HHHHHH
T ss_pred ceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHH-----------------------------------HHHHHH
Confidence 689999999999999763 3 3899999865432110 011245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhc-----CCCHHHHHHHHHHHH--
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEK-----GFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~-----~~~~~~v~~~l~~~~-- 552 (1578)
+|++.+.++ .+...+.+-.++..-.. .-++||||++|.+|.++...... .++...+...+.+++
T Consensus 74 ~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 74 REAACMKEF----DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHTTC----CCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC----CCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 666666554 23222333333322111 12899999999999887542221 467777766666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+..+|..|++|+|++|.|||+. .++++|||....
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~ 186 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRK 186 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccc
Confidence 7889999999999999999965 599999998644
No 306
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.95 E-value=1.1e-09 Score=133.43 Aligned_cols=132 Identities=14% Similarity=0.065 Sum_probs=89.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+... .+.+|.
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~------------------------------------------~~~~E~ 105 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------------------------------------------KARREV 105 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH------------------------------------------HHHHHH
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcch------------------------------------------hHHHHH
Confidence 57999999999999975 79999999985210 012233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.+. ..+...+.+-.++... ...-+|||||++|.+|.+...-. ...++...+...+.+++ +..+|..|+
T Consensus 106 ~~~~~~---~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 106 ELHWRA---SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHH---TTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHh---cCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 222222 1222223343444321 12347999999999998874321 12477777776666665 788999999
Q ss_pred cccCCCCCCCCCC------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|+|+||+|||+. .++++|||...
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred cccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999964 38999999764
No 307
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=98.95 E-value=1.3e-09 Score=127.11 Aligned_cols=136 Identities=18% Similarity=0.186 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ ... -.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~------~~~~~E~ 53 (311)
T 4agu_A 9 GKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP-----------------------------VIK------KIALREI 53 (311)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-H-----------------------------HHH------HHHHHHH
T ss_pred eEEeecCCeEEEEEEeCCCCcEEEEEEeeccccch-----------------------------HHH------HHHHHHH
Confidence 67999999999999975 69999999875432110 000 1234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. .....+|||||++|..+.++.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 54 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~d 127 (311)
T 4agu_A 54 RMLKQLK----HPNLVNLLEVFR-RKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRD 127 (311)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhCC----CCCccchhheee-cCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCC
Confidence 6665553 322233333332 2345689999999988877643 234577766666665555 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 128 lkp~Nil~~~~~~~kl~Dfg~~~ 150 (311)
T 4agu_A 128 VKPENILITKHSVIKLCDFGFAR 150 (311)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CChhhEEEcCCCCEEEeeCCCch
Confidence 999999964 58999999753
No 308
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.95 E-value=1.8e-09 Score=130.99 Aligned_cols=136 Identities=16% Similarity=0.158 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+........ ...-.+.+|++
T Consensus 62 ~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~~~~~~Ei~ 106 (390)
T 2zmd_A 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADN-----------------------------------QTLDSYRNEIA 106 (390)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECTTCCH-----------------------------------HHHHHHHHHHH
T ss_pred EEEccCCCeEEEEEEcCCCCEEEEEEEecccccH-----------------------------------HHHHHHHHHHH
Confidence 6899999999999998889999999986532110 00113466777
Q ss_pred HHHHHHHhhCCCCCeeecEEe--eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPYVYIPRIL--WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~--~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
.+.++.. +++. |.+++ ......-+|||| +.|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 107 ~l~~l~~---~~~~--iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHr 179 (390)
T 2zmd_A 107 YLNKLQQ---HSDK--IIRLYDYEITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHS 179 (390)
T ss_dssp HHHHHTT---TCTT--BCCEEEEEECSSEEEEEEE-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred HHHHccc---CCCe--EEEEEEEEecCCEEEEEEe-cCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 7777653 1232 22333 223344689999 45778877643 234566666655555555 788999999999
Q ss_pred CCCCCCCCCC--eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 180 Dlkp~NIll~~~~~kl~DFG~a~~ 203 (390)
T 2zmd_A 180 DLKPANFLIVDGMLKLIDFGIANQ 203 (390)
T ss_dssp CCCGGGEEESSSCEEECCCSSSCC
T ss_pred CCCHHHEEEECCeEEEEecCcccc
Confidence 9999999964 599999997643
No 309
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=98.95 E-value=9.5e-10 Score=132.78 Aligned_cols=138 Identities=18% Similarity=0.118 Sum_probs=87.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+......-. . +..+..|.
T Consensus 44 ~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~-~---------------------------------~~~~~~e~ 89 (373)
T 2r5t_A 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK-E---------------------------------EKHIMSER 89 (373)
T ss_dssp EEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC----------------------------------------------
T ss_pred EEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH-H---------------------------------HHHHHHHH
Confidence 68999999999999976 6899999998754211000 0 00011111
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+ ...+ +++. +.+-..+ .....-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++||
T Consensus 90 ~~l---l~~~-~hp~Iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~givHr 163 (373)
T 2r5t_A 90 NVL---LKNV-KHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQ-RERCFLEPRARFYAAEIASALGYLHSLNIVYR 163 (373)
T ss_dssp -CC---BCCC-CCTTBCCEEEEE-ECSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHH---HHhC-CCCCCCCEEEEE-EeCCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 110 0111 2232 2222222 22345689999999999987643 234566666555555554 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+||.|||+. .++++|||....
T Consensus 164 Dlkp~NIll~~~g~ikL~DFG~a~~ 188 (373)
T 2r5t_A 164 DLKPENILLDSQGHIVLTDFGLCKE 188 (373)
T ss_dssp CCCGGGEEECTTSCEEECCCCBCGG
T ss_pred CCCHHHEEECCCCCEEEeeCccccc
Confidence 9999999964 699999997643
No 310
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=98.95 E-value=1.9e-09 Score=126.64 Aligned_cols=136 Identities=18% Similarity=0.119 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+....-.. +-++.+|.
T Consensus 30 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--------------------------------------~~~~~~e~ 71 (326)
T 2x7f_A 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--------------------------------------EEEIKQEI 71 (326)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECCSST--------------------------------------THHHHHHH
T ss_pred EEeccCCCEEEEEEEECCCCCeEEEEEEecCccc--------------------------------------HHHHHHHH
Confidence 68999999999999964 8999999998643211 01234555
Q ss_pred HHHHHHHHhhCCCCC-eeecEEeeCC-----CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPY-VYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~-v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +++. +.+-..+... ....+|||||++|.+|.++.... ...++...+...+.+++ +..+|.
T Consensus 72 ~~l~~l~----~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 72 NMLKKYS----HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp HHHHHHC----CSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc----CCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5555552 2232 2222333221 34568999999999998875422 24577776666665555 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.|++|+|++|.||++. .++++|||....
T Consensus 148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred CCccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 9999999999999965 599999997644
No 311
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=98.95 E-value=1.3e-09 Score=127.73 Aligned_cols=138 Identities=17% Similarity=0.158 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec------CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK------EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~------~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..+..
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~~~ 74 (322)
T 1p4o_A 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASM------------------------------------RERIE 74 (322)
T ss_dssp EEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCH------------------------------------HHHHH
T ss_pred eEeccCCceEEEeeeecCccCCCCceEEEEEecccccCH------------------------------------HHHHH
Confidence 68999999999999864 4789999988643211 01123
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------cCCCHHHHHHHHHHHH-
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------KGFSLADVDRKLFTAF- 552 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------~~~~~~~v~~~l~~~~- 552 (1578)
|.+|++.+.++ .+...+.+-.++ ......+|||||++|.+|.++..-.. ..++...+...+.+++
T Consensus 75 ~~~E~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 75 FLNEASVMKEF----NCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHGGGC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCCEeeeEEEE-ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 45566555544 233223333333 22345689999999999988754211 2346666666665555
Q ss_pred -HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 553 -AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 553 -l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
+..+|..|++|+|++|.||++. .++++|||....+
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~ 188 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccc
Confidence 7889999999999999999964 5999999976443
No 312
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.95 E-value=1.9e-09 Score=129.31 Aligned_cols=134 Identities=17% Similarity=0.128 Sum_probs=94.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-.... .-.+.+|+
T Consensus 33 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~~E~ 76 (364)
T 3qyz_A 33 SYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTY------------------------------------CQRTLREI 76 (364)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHH------------------------------------HHHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHH------------------------------------HHHHHHHH
Confidence 68999999999999965 799999999875322110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +...+.+-.++.... ..-+|||||++| .|.++ +....++...+...+.+++ +..+|..|+
T Consensus 77 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~--l~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 77 KILLRFR----HENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKL--LKTQHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp HHHHHCC----CTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHhcC----CCCCccceeEEecCCccccceEEEEEcccCc-CHHHH--HHhCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6666653 333344444443221 346899999987 55554 3456688877777666666 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|+|+||+|||+. .++++|||...
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceE
Confidence 9999999999965 59999999764
No 313
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=98.95 E-value=2.3e-10 Score=114.20 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=69.3
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCC----ceEEEEEECccc--hhhHhHcCccccCCcEEEEcCCcccccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHVHNE--QGLARRLGVGSQLPQIALLTDGRTSFFK 945 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~----~v~~a~VDc~~~--~~L~~k~gV~~~~PTl~lf~~G~~~~y~ 945 (1578)
+.+.+||+|||+||++|+.+.+.. +..+... .+.+.+||.+.+ .+++.+++|.+ .|||++|++|+.+...
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g-~PT~i~f~~G~ev~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTF-TPTFVLMAGDVESGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCS-SSEEEEEETTEEEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCC-CCEEEEEECCEEEeee
Confidence 357899999999999999986432 2222211 267888998876 58999999998 9999999999988888
Q ss_pred CCCCCHHHHHHHHHhhC
Q psy12972 946 EPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 946 ~G~~s~~~L~~fi~~~l 962 (1578)
.|...++.+..|+.+.+
T Consensus 93 ~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLI 109 (116)
T ss_dssp ECCCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH
Confidence 89999999999997654
No 314
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=98.95 E-value=1.7e-09 Score=127.10 Aligned_cols=148 Identities=14% Similarity=0.125 Sum_probs=98.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+.+........ ....
T Consensus 10 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----------------~~~~------------ 58 (321)
T 2a2a_A 10 VEDFYDIG--EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR-----------------RGVS------------ 58 (321)
T ss_dssp HHHHEEEE--EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS-----------------SSBC------------
T ss_pred hhccEEEe--eEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc-----------------cchh------------
Confidence 34444443 68999999999999975 7999999998764321100 0000
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQ 555 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~ 555 (1578)
.-.+.+|++.+.++. +...+.+-.++ ......+|||||++|.+|.++.. ....++...+...+.+++ +..
T Consensus 59 --~~~~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~ 130 (321)
T 2a2a_A 59 --REEIEREVSILRQVL----HHNVITLHDVY-ENRTDVVLILELVSGGELFDFLA-QKESLSEEEATSFIKQILDGVNY 130 (321)
T ss_dssp --HHHHHHHHHHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-TCSCEEHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHhCC----CCCcceEEEEE-ecCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHH
Confidence 012456666666553 32223332333 22345689999999999988743 223466666666666655 788
Q ss_pred HHHcCccccCCCCCCCCCC-------eeEEecCCchh
Q psy12972 556 IFQTGFVHADPHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 556 i~~~G~vH~DpHPGNilv~-------~v~liDfG~~~ 585 (1578)
+|..|++|+|++|.||++. .++++|||...
T Consensus 131 lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp HHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred HHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 9999999999999999953 48999999764
No 315
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.94 E-value=1.5e-09 Score=132.94 Aligned_cols=141 Identities=14% Similarity=0.159 Sum_probs=96.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+..... .. .........+.+|+
T Consensus 141 ~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-------------------~~----------~~~~~~~~~~~~E~ 191 (419)
T 3i6u_A 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAI-------------------GS----------AREADPALNVETEI 191 (419)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTT-------------------C------------------CCHHHHH
T ss_pred eEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcc-------------------cc----------cccchhHHHHHHHH
Confidence 67999999999999965 78999999987542110 00 00001112456777
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. ....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 192 ~~l~~l~----hpniv~l~~~~~--~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrD 264 (419)
T 3i6u_A 192 EILKKLN----HPCIIKIKNFFD--AEDYYIVLELMEGGELFDKVV-GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 264 (419)
T ss_dssp HHHHHCC----CTTBCCCCEEEE--SSEEEEEEECCTTCBGGGGTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhCC----CCCEeeEEEEEe--cCceEEEEEcCCCCcHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 7777663 333344434432 234689999999999987642 234567776666666655 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 265 lkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 265 LKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp CCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred CChHhEEEecCCCcceEEEeecccce
Confidence 999999973 28999999764
No 316
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.94 E-value=1.9e-09 Score=127.76 Aligned_cols=146 Identities=10% Similarity=0.071 Sum_probs=94.9
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CC-CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EG-VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G-~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
+.+-|.-. +.||.|++|.||+|+.. +| +.||||+.+..-..
T Consensus 17 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~----------------------------------- 59 (355)
T 2eu9_A 17 LQERYEIV--GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY----------------------------------- 59 (355)
T ss_dssp ETTTEEEE--EEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHH-----------------------------------
T ss_pred ecccEEEE--EEeeccCCeEEEEEEecCCCceEEEEEEEcccccc-----------------------------------
Confidence 34444444 67999999999999964 44 79999998642110
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEe--eCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRIL--WDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~--~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
.-.+.+|++.+.++++.-.... ..+..++ .......+|||||+.|..+..+.......++...+...+.+++
T Consensus 60 ---~~~~~~E~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~ 135 (355)
T 2eu9_A 60 ---REAARLEINVLKKIKEKDKENK-FLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135 (355)
T ss_dssp ---HHHHHHHHHHHHHHHHHCTTSC-SCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred ---hhHHHHHHHHHHHHhhcCCCCc-eeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence 0123556666766665322111 1122222 1234566899999966544433222223577777777666666
Q ss_pred HHHHHHcCccccCCCCCCCCC----------------------CeeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVN----------------------TWLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv----------------------~~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+ +.++++|||...
T Consensus 136 L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 190 (355)
T 2eu9_A 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT 190 (355)
T ss_dssp HHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCE
T ss_pred HHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccc
Confidence 888999999999999999997 248889999753
No 317
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.94 E-value=1.2e-09 Score=136.79 Aligned_cols=134 Identities=19% Similarity=0.140 Sum_probs=96.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+.+... .-+|.+|+
T Consensus 226 ~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~~~~E~ 267 (495)
T 1opk_A 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--------------------------------------VEEFLKEA 267 (495)
T ss_dssp EESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--------------------------------------HHHHHHHH
T ss_pred eEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc--------------------------------------hHHHHHHH
Confidence 57999999999999977 5899999998653210 01246677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...|.+-.++. .....+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++|+
T Consensus 268 ~~l~~l~----hpniv~l~~~~~-~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr 342 (495)
T 1opk_A 268 AVMKEIK----HPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 342 (495)
T ss_dssp HHHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhcC----CCCEeeEEEEEe-cCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 7776653 333333333332 234568999999999998874321 23466666666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|.|||++ .++++|||...
T Consensus 343 Dlkp~NIll~~~~~~kl~DFG~a~ 366 (495)
T 1opk_A 343 NLAARNCLVGENHLVKVADFGLSR 366 (495)
T ss_dssp CCSGGGEEECGGGCEEECCTTCEE
T ss_pred CCChhhEEECCCCcEEEeecccce
Confidence 9999999975 59999999764
No 318
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=98.94 E-value=6.3e-10 Score=134.32 Aligned_cols=138 Identities=14% Similarity=0.101 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec--CC--CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EG--VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G--~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +| ..||||+.+...... ..-+|.
T Consensus 95 ~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~ 138 (373)
T 3c1x_A 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG------------------------------------EVSQFL 138 (373)
T ss_dssp EEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSH------------------------------------HHHHHH
T ss_pred cEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHH------------------------------------HHHHHH
Confidence 57999999999999964 33 468999875421110 011245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+...+.+-.+..+-....+|||||++|.+|.++..-....++...+...+.+++ +..+|..|++
T Consensus 139 ~E~~il~~l----~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 214 (373)
T 3c1x_A 139 TEGIIMKDF----SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFV 214 (373)
T ss_dssp HHHTTSTTC----CCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 555555443 2333344434433334456899999999999887543334566666666665655 8899999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.|||+. .++++|||....
T Consensus 215 HrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 215 HRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp CSCCCGGGEEECTTCCEEECCC-----
T ss_pred cCccchheEEECCCCCEEEeecccccc
Confidence 999999999975 599999997643
No 319
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=98.94 E-value=1.4e-09 Score=128.18 Aligned_cols=138 Identities=19% Similarity=0.177 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..... ..+.+
T Consensus 36 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~------------------------------------~~~~~ 79 (327)
T 2yfx_A 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSE------------------------------------QDELD 79 (327)
T ss_dssp EECC--CSSCEEEEEC--------CCEEEEEECCSSCCH------------------------------------HHHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccch------------------------------------hhHHH
Confidence 6799999999999984 36889999998643211 01224
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh------cCCCHHHHHHHHHHHH--HH
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE------KGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~------~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.+|++.+.++. +...+.+-.++. .....+|||||++|.+|.++..-.. ..++...+...+.+++ +.
T Consensus 80 ~~~E~~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~ 154 (327)
T 2yfx_A 80 FLMEALIISKFN----HQNIVRCIGVSL-QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154 (327)
T ss_dssp HHHHHHHHHHCC----CTTBCCEEEEEC-SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC----CCCCCeEEEEEc-CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 566777666652 322233333332 2345689999999999988754221 2366666666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchhhh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKFRL 587 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~~l 587 (1578)
.+|..|++|+|++|.|||+. .++++|||....+
T Consensus 155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred HHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 89999999999999999975 3899999976443
No 320
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=98.94 E-value=1.4e-09 Score=124.81 Aligned_cols=132 Identities=14% Similarity=0.057 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-. .+.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------------------------------------~~~~e~ 55 (284)
T 2a19_B 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----------------------------------------KAEREV 55 (284)
T ss_dssp EEEECSSSCCEEEEEETTTCCEEEEEEEECCSG-----------------------------------------GGHHHH
T ss_pred eeeccCCceEEEEEEEcCCCeEEEEEEeccccH-----------------------------------------HHHHHH
Confidence 67999999999999976 899999999865321 123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---------------CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---------------SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTA 551 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---------------~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~ 551 (1578)
+.+.++ .+...+.+..++... ...-+|||||++|.+|.++..-. ...++...+...+.++
T Consensus 56 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi 131 (284)
T 2a19_B 56 KALAKL----DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131 (284)
T ss_dssp HHHHHC----CCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHH
T ss_pred HHHHhC----CCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHH
Confidence 555444 233333333333210 12247999999999999875422 2457776666666555
Q ss_pred H--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 552 F--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 552 ~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 132 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 170 (284)
T 2a19_B 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170 (284)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred HHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhhe
Confidence 5 7889999999999999999964 59999999753
No 321
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.94 E-value=1.6e-09 Score=128.50 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=90.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+..... ..|.
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------------------------------------------~~e~ 72 (336)
T 3fhr_A 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA------------------------------------------RQEV 72 (336)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH------------------------------------------HHHH
T ss_pred eeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH------------------------------------------HHHH
Confidence 57999999999999976 7999999998643210 0111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC---ceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS---TRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t---~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
... .....+...+.+-.++..... .-+|||||++|.+|.++..-.. ..++...+...+.+++ +..+|..|+
T Consensus 73 ~~~---~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i 149 (336)
T 3fhr_A 73 DHH---WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149 (336)
T ss_dssp HHH---HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHH---HHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 111 111223333444444433222 2479999999999988743221 2477777777666665 888999999
Q ss_pred cccCCCCCCCCCC------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+|+|++|.||++. .++++|||...
T Consensus 150 vH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp ECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred ecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999974 28999999763
No 322
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=98.94 E-value=1.6e-09 Score=126.40 Aligned_cols=136 Identities=14% Similarity=0.112 Sum_probs=93.5
Q ss_pred cccccccceEEEEEEe------cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVT------KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l------~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... + .-+
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~---~---------------------------------~~~ 72 (314)
T 2ivs_A 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS---E---------------------------------LRD 72 (314)
T ss_dssp EEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHH---H---------------------------------HHH
T ss_pred eeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHH---H---------------------------------HHH
Confidence 6799999999999985 256899999987543211 0 012
Q ss_pred HHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----------------------cCC
Q psy12972 483 FLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----------------------KGF 539 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----------------------~~~ 539 (1578)
+.+|++.+.++ .+..-+.+-..+ .....-+|||||++|.+|.++..-.. ..+
T Consensus 73 ~~~E~~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 73 LLSEFNVLKQV----NHPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHTTC----CCTTBCCEEEEE-CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHhhC----CCCceeeEEEEE-ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 35566655544 222223332332 23445689999999999988754211 125
Q ss_pred CHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 540 SLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 540 ~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+...+...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~ 198 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccc
Confidence 6666666666655 7889999999999999999964 69999999764
No 323
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=98.94 E-value=1.5e-09 Score=135.30 Aligned_cols=137 Identities=15% Similarity=0.112 Sum_probs=95.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+..... .+ ..-.+.+|+
T Consensus 22 ~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~--~~--------------------------------~~~~~~~Ei 67 (476)
T 2y94_A 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS--LD--------------------------------VVGKIRREI 67 (476)
T ss_dssp EEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH--TT--------------------------------THHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC--HH--------------------------------HHHHHHHHH
Confidence 68999999999999975 89999999987532110 00 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ..+..+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 68 ~~l~~l----~HpnIv~l~~~~~-~~~~~~lv~E~~~gg~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrD 141 (476)
T 2y94_A 68 QNLKLF----RHPHIIKLYQVIS-TPSDIFMVMEYVSGGELFDYIC-KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRD 141 (476)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCSSEEHHHHTT-SSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSC
T ss_pred HHHHhC----CCCCCCcEEEEEE-ECCEEEEEEeCCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCCCccc
Confidence 655443 2333233333332 2355689999999999988643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 142 Lkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 142 LKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp CSGGGEEECTTCCEEECCCSSCE
T ss_pred ccHHHEEEecCCCeEEEeccchh
Confidence 999999964 59999999764
No 324
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.94 E-value=1.3e-09 Score=128.65 Aligned_cols=137 Identities=19% Similarity=0.192 Sum_probs=94.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... . +-.+.+|+
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------~------~~~~~~E~ 75 (331)
T 4aaa_A 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM-----------------------------V------KKIAMREI 75 (331)
T ss_dssp EEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHH-----------------------------H------HHHHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCceEEEEEEecCCCchH-----------------------------H------HHHHHHHH
Confidence 68999999999999976 699999998754321110 0 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++. .....+|||||++|..+.++.. ...+++...+...+.+++ +..+|..|++|+|
T Consensus 76 ~~l~~l~----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~d 149 (331)
T 4aaa_A 76 KLLKQLR----HENLVNLLEVCK-KKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRD 149 (331)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhhCC----CCCEeeEEEEee-cCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCEEccC
Confidence 6665553 222233333332 2345689999999988887632 345677777777666666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 150 lkp~Nil~~~~~~~kl~Dfg~~~~ 173 (331)
T 4aaa_A 150 IKPENILVSQSGVVKLCDFGFART 173 (331)
T ss_dssp CCGGGEEECTTSCEEECCCTTC--
T ss_pred cChheEEEcCCCcEEEEeCCCcee
Confidence 999999964 599999997643
No 325
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.93 E-value=1.5e-09 Score=127.98 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=90.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+....-... +..|..
T Consensus 43 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~----------------------------------------~~~e~~ 81 (337)
T 3mdy_A 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEAS----------------------------------------WFRETE 81 (337)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHH----------------------------------------HHHHHH
T ss_pred eEeecCCCeEEEEEEEC-CceEEEEEEeccccch----------------------------------------hhhHHH
Confidence 68999999999999875 9999999986432211 011111
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
..... .+.+...+.+-..+.+.. ...+|||||++|.+|.++. ...+++...+...+.+++ +..+|..
T Consensus 82 ~~~~~--~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 157 (337)
T 3mdy_A 82 IYQTV--LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFST 157 (337)
T ss_dssp HHTST--TCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHSCBCST
T ss_pred HHHHH--hhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 11111 012222233333333222 3457999999999998874 556788877777776666 7788887
Q ss_pred ----CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ----GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ----G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 158 ~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp TCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 999999999999964 58999999763
No 326
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.93 E-value=3.5e-10 Score=120.93 Aligned_cols=104 Identities=16% Similarity=0.248 Sum_probs=81.3
Q ss_pred eeccccccceeccc-CCCCcEEEEEEcCCCcccccccHHH---HHHHHHhCCCceEEEEEECccchhh------------
Q psy12972 857 STTHWNFEKNYIPK-SYTTPHLILFYSDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNEQGL------------ 920 (1578)
Q Consensus 857 ~Lt~~nF~~~vl~~-s~~~~~LV~FyapwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~~~L------------ 920 (1578)
..+..+|++.+... ..+++++|.|||+||++|+.+.+.. .++.+.+++ ++.++.||++.+.++
T Consensus 30 ~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 30 HAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred ccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCcccccchhhhhhhcchh
Confidence 35566776655322 3478999999999999999984444 555555543 489999999887655
Q ss_pred --------------HhHcCccccCCcEEEE-cCCccccccCCCCC-HHHHHHHHHhhC
Q psy12972 921 --------------ARRLGVGSQLPQIALL-TDGRTSFFKEPSFS-VQKMVEFFRLKL 962 (1578)
Q Consensus 921 --------------~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s-~~~L~~fi~~~l 962 (1578)
+++|+|.+ +||++++ ++|+.+....|..+ .+++.+++.+.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~-~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l 165 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANA-QPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGL 165 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCC-SSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCC-cceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHH
Confidence 89999998 9999999 88988877779888 999999998754
No 327
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=98.93 E-value=1.9e-09 Score=136.76 Aligned_cols=138 Identities=16% Similarity=0.083 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ -..+-.+.+|.
T Consensus 190 ~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~----------------------------------~~~~~~~~~E~ 235 (576)
T 2acx_A 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------------------------------RKGEAMALNEK 235 (576)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH----------------------------------TTCHHHHHHHH
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhh----------------------------------hHHHHHHHHHH
Confidence 68999999999999975 79999999986431100 00112245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++. +...|.+-..+. ....-+|||||++|.+|.+..... ..+++...+...+.+++ ++.+|..|++|+
T Consensus 236 ~iL~~l~----hp~Iv~l~~~~~-~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHr 310 (576)
T 2acx_A 236 QILEKVN----SRFVVSLAYAYE-TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310 (576)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHcC----CCCEeeEEEEEe-eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEecc
Confidence 6665542 222233323332 234568999999999998764321 22377777666666655 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 311 DLKPeNILld~~g~vKL~DFGla~ 334 (576)
T 2acx_A 311 DLKPENILLDDHGHIRISDLGLAV 334 (576)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCchheEEEeCCCCeEEEecccce
Confidence 9999999964 59999999764
No 328
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=98.93 E-value=1.4e-09 Score=131.73 Aligned_cols=137 Identities=11% Similarity=0.020 Sum_probs=93.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ . -. .-.+.+|+
T Consensus 21 ~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~--~------------------~~--------------~~~~~~E~ 66 (384)
T 4fr4_A 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVE--R------------------NE--------------VRNVFKEL 66 (384)
T ss_dssp EEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHH--T------------------TC--------------HHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEehhhccc--H------------------HH--------------HHHHHHHH
Confidence 68999999999999965 68999999986432100 0 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...|.+-..+. -....+|||||++|..|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~il~~l----~hp~Iv~l~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrD 140 (384)
T 4fr4_A 67 QIMQGL----EHPFLVNLWYSFQ-DEEDMFMVVDLLLGGDLRYHLQ-QNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140 (384)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCCCcEEEEEE-eCCEEEEEEecCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecc
Confidence 555544 2222222222222 2345689999999999987643 233567666666665655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 141 lkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 141 MKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CSGGGEEECTTSCEEECCCTTCE
T ss_pred CcHHHeEECCCCCEEEeccceee
Confidence 999999964 59999999764
No 329
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.93 E-value=2e-09 Score=127.29 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=92.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-.. ++..|++
T Consensus 48 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~----------------------------------------~~~~e~~ 86 (342)
T 1b6c_B 48 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----------------------------------------SWFREAE 86 (342)
T ss_dssp EEEEEETTEEEEEEEE-TTEEEEEEEECGGGHH----------------------------------------HHHHHHH
T ss_pred eeecCCCCcEEEEEEE-cCccEEEEEeCchhHH----------------------------------------HHHHHHH
Confidence 6899999999999987 6999999998643211 1223333
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH------
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF------ 557 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~------ 557 (1578)
.+.+.. +.+..-+.+-..+..-. ...+|||||++|.+|.++. ...+++...+...+.++. +..+|
T Consensus 87 ~~~~~~--l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 162 (342)
T 1b6c_B 87 IYQTVM--LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162 (342)
T ss_dssp HHHHSC--CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCST
T ss_pred HHHHhh--cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHH--hccCccHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333211 22322233333333222 2568999999999998874 456778777777666665 77888
Q ss_pred --HcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 558 --QTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..|++|+|++|.|||+. .++++|||...
T Consensus 163 ~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp TCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 88999999999999964 58999999763
No 330
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.93 E-value=2.1e-09 Score=127.67 Aligned_cols=135 Identities=16% Similarity=0.102 Sum_probs=93.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-... ...++.+|+
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~~~E~ 60 (353)
T 2b9h_A 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL------------------------------------FALRTLREI 60 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHH------------------------------------HHHHHHHHH
T ss_pred eEEcCCCCeEEEEEEECCCCcEEEEEeecccccch------------------------------------HHHHHHHHH
Confidence 67999999999999975 79999999986532111 011234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.+++ +...+.+-.+...- ....+|||||++| .|.+. +....++...+...+.+++ +..+|..|+
T Consensus 61 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 133 (353)
T 2b9h_A 61 KILKHFK----HENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRV--ISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133 (353)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCSTTCCCEEEEECCCSE-EHHHH--HHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHhCc----CCCcCCeeeeecccccCccceEEEEEeccCc-cHHHH--HhhcCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 6665553 32223332222211 2456899999986 55554 3445678777777666665 788999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 134 vH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (353)
T 2b9h_A 134 IHRDLKPSNLLINSNCDLKVCDFGLARI 161 (353)
T ss_dssp ECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred ecCCCCHHHeEEcCCCcEEEEecccccc
Confidence 9999999999964 599999997643
No 331
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=98.93 E-value=2.9e-09 Score=122.28 Aligned_cols=140 Identities=15% Similarity=0.113 Sum_probs=97.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ .... .-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----------------~~~~--------------~~~~~~E~ 59 (283)
T 3bhy_A 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR-----------------RGVS--------------REEIEREV 59 (283)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS-----------------SSBC--------------HHHHHHHH
T ss_pred HhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc-----------------cchH--------------HHHHHHHH
Confidence 67999999999999976 7999999998654321100 0000 11245666
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 60 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~d 133 (283)
T 3bhy_A 60 NILREIR----HPNIITLHDIFE-NKTDVVLILELVSGGELFDFLA-EKESLTEDEATQFLKQILDGVHYLHSKRIAHFD 133 (283)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhCC----CCCeeehhheec-CCCeEEEEEeecCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCC
Confidence 6666653 322233333332 2455689999999999988753 334677777777666665 7889999999999
Q ss_pred CCCCCCCCC-------eeEEecCCchh
Q psy12972 566 PHSGNDVNT-------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~-------~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 134 l~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 134 LKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp CSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred CChHHEEEecCCCCCCceEEEecccce
Confidence 999999963 58999999764
No 332
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.92 E-value=2e-09 Score=134.42 Aligned_cols=142 Identities=21% Similarity=0.189 Sum_probs=99.1
Q ss_pred hhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ .+
T Consensus 22 ~~y~~~--~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------~~-------------- 64 (486)
T 3mwu_A 22 ERYNIV--CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---------------------KD-------------- 64 (486)
T ss_dssp HHEEEE--EEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC---------------------SC--------------
T ss_pred cceEEe--EEEeecCCEEEEEEEECCCCCEEEEEEEecccccc---------------------hH--------------
Confidence 334443 68999999999999975 89999999986432110 00
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
.-.+.+|++.+.++. +...+.+-.++. ....-+|||||++|.+|.+... ....++...+...+.+++ +..+|
T Consensus 65 ~~~~~~E~~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH 138 (486)
T 3mwu_A 65 TSTILREVELLKKLD----HPNIMKLFEILE-DSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMH 138 (486)
T ss_dssp HHHHHHHHHHHHHCC----CTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC----CCCcCeEEEEEE-cCCEEEEEEEcCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012355666666652 333333333432 2345689999999999977643 345677777777666665 78899
Q ss_pred HcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 558 QTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
..|++|+|+||.|||+. .++++|||...
T Consensus 139 ~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred HCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 99999999999999973 48999999764
No 333
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.92 E-value=2.4e-09 Score=139.05 Aligned_cols=138 Identities=14% Similarity=0.057 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .+ .. -.+..|.
T Consensus 347 ~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~--~~------------------~~--------------~~~~~E~ 392 (674)
T 3pfq_A 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ--DD------------------DV--------------ECTMVEK 392 (674)
T ss_dssp EESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH--TT------------------TT--------------HHHHHHH
T ss_pred EEEccCCCEEEEEEEECCCCcEEEEEEEecccccc--HH------------------HH--------------HHHHHHH
Confidence 57999999999999965 78999999987532110 00 00 0112233
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.. ..+++.|.--.-+..-...-+|||||++|..|.+... ....++...+...+.+++ ++.+|..|++|||
T Consensus 393 ~~l~~----~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrD 467 (674)
T 3pfq_A 393 RVLAL----PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRD 467 (674)
T ss_dssp HHHTC----TTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCC
T ss_pred HHHHh----ccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 33322 2233433222222222344579999999999987643 234577776666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
+||.|||+. .++++|||...
T Consensus 468 LKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 468 LKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp CCSTTEEECSSSCEEECCCTTCE
T ss_pred CChhhEEEcCCCcEEEeecceee
Confidence 999999964 59999999764
No 334
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=98.92 E-value=2.5e-09 Score=123.62 Aligned_cols=135 Identities=16% Similarity=0.058 Sum_probs=90.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~---------------------------------~~~~~E~ 53 (303)
T 1zy4_A 12 AVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-----L---------------------------------STILSEV 53 (303)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHH-----H---------------------------------HHHHHHH
T ss_pred heeccCCcEEEEEEEEcCCCeEEEEEEEeccHHH-----H---------------------------------HHHHHHH
Confidence 67999999999999964 8999999998542110 0 1134455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC------------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--H
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD------------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~------------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l 553 (1578)
+.+.++ .+...+.+-..+.+ .....+|||||++|.+|.++..-.....+...+...+.+++ +
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 54 MLLASL----NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHTTC----CCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHhc----CchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 554443 22222222222111 12345799999999999887543333455566655555555 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
..+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 889999999999999999964 58999999754
No 335
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.92 E-value=2.8e-09 Score=128.96 Aligned_cols=136 Identities=14% Similarity=0.194 Sum_probs=83.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .+ .-.+.+|.
T Consensus 15 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~--~~---------------------------------~~~~~~E~ 59 (388)
T 3oz6_A 15 KKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNS--TD---------------------------------AQRTFREI 59 (388)
T ss_dssp EC-------CEEEEEETTTCCEEEEEEECC--CCH--HH---------------------------------HHHHHHHH
T ss_pred EEeeeCCCeEEEEEEECCCCCEEEEEEecccccCh--HH---------------------------------HHHHHHHH
Confidence 68999999999999964 89999999875432111 00 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
..+.++. .+...+.+-.++..-. ..-+|||||++| .+.++ +....++...+...+.+++ ++.+|..|++||
T Consensus 60 ~~l~~l~---~h~niv~l~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHr 133 (388)
T 3oz6_A 60 MILTELS---GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAV--IRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR 133 (388)
T ss_dssp HHHHHTT---TCTTBCCEEEEEECTTSSCEEEEEECCSE-EHHHH--HHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHhcc---CCCCCCeeeeEEecCCCCEEEEEecccCc-CHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeC
Confidence 5554443 1222334444443222 235899999986 55544 3445677666665555555 789999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||+|||+. .++++|||...
T Consensus 134 Dlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 134 DMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCE
T ss_pred CCCHHHeEEcCCCCEEecCCcccc
Confidence 9999999965 59999999764
No 336
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.92 E-value=1.8e-09 Score=127.37 Aligned_cols=132 Identities=17% Similarity=0.083 Sum_probs=86.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-.... ..|..
T Consensus 19 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~----------------------------------------~~e~~ 57 (336)
T 3g2f_A 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNF----------------------------------------INEKN 57 (336)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHH----------------------------------------HHHHH
T ss_pred eecccCCCeEEEEEEE-CCeEEEEEEeeccchhhH----------------------------------------HHHHH
Confidence 6899999999999976 799999999865432110 11110
Q ss_pred HHHHHHHhhCCCCCeeecEEee--CCCC--ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc---
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW--DKSS--TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT--- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~--~~~t--~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~--- 559 (1578)
- .+. ..+.+...+.+-..+. ...+ .-+|||||++|.+|.++. ...+.+...+...+.+++ +..+|..
T Consensus 58 ~-~~~-~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~ 133 (336)
T 3g2f_A 58 I-YRV-PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133 (336)
T ss_dssp H-HTS-TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHHCCBCC
T ss_pred H-HHH-HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHH--hhcccchhHHHHHHHHHHHHHHHHHhhhcc
Confidence 0 000 1122222222221111 1111 237999999999998874 455566666666555555 7788988
Q ss_pred ------CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ------GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ------G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 134 ~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp GGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred ccccccceeecccccceEEEcCCCcEEEeecccee
Confidence 999999999999965 59999999764
No 337
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=98.92 E-value=2.4e-09 Score=129.55 Aligned_cols=136 Identities=17% Similarity=0.113 Sum_probs=96.0
Q ss_pred cccccc--cceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAA--SLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~Plasa--SiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.| ++|.||+|+.+ +|+.||||+.+...... +.. -.+.+
T Consensus 31 ~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~------~~~~~ 75 (389)
T 3gni_B 31 TVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSN-----------------------------EMV------TFLQG 75 (389)
T ss_dssp EEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCH-----------------------------HHH------HHHHH
T ss_pred ecccCCcCCceEEEEEEEcCCCCEEEEEEecccccCh-----------------------------HHH------HHHHH
Confidence 689999 99999999976 79999999987543211 000 12345
Q ss_pred HHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 486 EGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
|++.+.++. +...|.+-.++. ....-+|||||++|.+|.++.... ..+++...+...+.+++ +..+|..|++
T Consensus 76 E~~~l~~l~----h~niv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 150 (389)
T 3gni_B 76 ELHVSKLFN----HPNIVPYRATFI-ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYV 150 (389)
T ss_dssp HHHHHHHCC----CTTBCCEEEEEE-ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhCC----CCCCCcEeEEEE-ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 666665553 333333333332 234568999999999998875422 24577777766666665 8889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCch
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|+|+||.|||+. .++++|||..
T Consensus 151 HrDlkp~NIll~~~~~~kl~dfg~~ 175 (389)
T 3gni_B 151 HRSVKASHILISVDGKVYLSGLRSN 175 (389)
T ss_dssp CCCCSGGGEEECTTCCEEECCGGGC
T ss_pred cCCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999965 5999999865
No 338
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.92 E-value=9.9e-10 Score=135.63 Aligned_cols=137 Identities=15% Similarity=0.064 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++.....- + ....+.+|+
T Consensus 154 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~--------------------------------~~~~~~~e~ 199 (446)
T 4ejn_A 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK--D--------------------------------EVAHTLTEN 199 (446)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC----------------------------------------------
T ss_pred EEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhh--H--------------------------------HHHHHHHHH
Confidence 68999999999999964 799999999875421100 0 000122333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|. .|++|+
T Consensus 200 ~~l~~l----~h~~iv~l~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHr 273 (446)
T 4ejn_A 200 RVLQNS----RHPFLTALKYSFQ-THDRLCFVMEYANGGELFFHLS-RERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273 (446)
T ss_dssp -CCCCC----SCTTSCCEEEEEE-ETTEEEEEECCCSSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHhC----CCCeEeeEEEEEe-eCCEEEEEEeeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEEC
Confidence 333222 2222233323332 2345679999999999977643 334567776666666655 788997 999999
Q ss_pred CCCCCCCCCC---eeEEecCCchh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+||.|||+. .++++|||...
T Consensus 274 Dlkp~NIll~~~~~~kl~DFG~a~ 297 (446)
T 4ejn_A 274 DLKLENLMLDKDGHIKITDFGLCK 297 (446)
T ss_dssp CCCGGGEEECSSSCEEECCCCCCC
T ss_pred CCCHHHEEECCCCCEEEccCCCce
Confidence 9999999964 59999999764
No 339
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.92 E-value=2.2e-09 Score=124.23 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-C---CCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK-E---GVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~---G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. + +..||||+........ ..-.|.
T Consensus 27 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~~ 70 (298)
T 3pls_A 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ------------------------------------QVEAFL 70 (298)
T ss_dssp EEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHH------------------------------------HHHHHH
T ss_pred ceeccCCCceEEEEEEecCCCceeeeeeeeccccccHH------------------------------------HHHHHH
Confidence 67999999999999854 3 3379999875422110 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++ .+..-+.+-.++.+-....+++|||+.|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 71 ~E~~~l~~l----~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 146 (298)
T 3pls_A 71 REGLLMRGL----NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFV 146 (298)
T ss_dssp HHHHHHHTC----CCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhC----CCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 566555554 2333344444443333334899999999999887543345567776666665655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|+|++|.||++. .++++|||....
T Consensus 147 H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 147 HRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp CSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred cCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999965 599999997643
No 340
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.91 E-value=2.3e-09 Score=126.54 Aligned_cols=138 Identities=21% Similarity=0.165 Sum_probs=95.0
Q ss_pred CcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
.+.||.|++|.||+|+.. +|+.||||+........- ....+.+|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~e 78 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-----------------------------------CRAEILHE 78 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE-----------------------------------CHHHHHHH
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH-----------------------------------HHHHHHHH
Confidence 368999999999999976 799999999865322110 00123455
Q ss_pred HHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 487 GRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
++.+.++. +++. +.+-.++ ......+|||||++|.+|.++..-. ...++...+...+.+++ +..+|..|++
T Consensus 79 ~~~l~~l~----~~~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~giv 153 (327)
T 3lm5_A 79 IAVLELAK----SCPRVINLHEVY-ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIV 153 (327)
T ss_dssp HHHHHHTT----TCTTBCCEEEEE-ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHhcc----CCCCEEEEEEEE-EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 55555543 3332 2222222 2345568999999999998874211 24567777766666665 7889999999
Q ss_pred ccCCCCCCCCCC------eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 154 H~Dikp~NIl~~~~~~~~~~kL~Dfg~a~ 182 (327)
T 3lm5_A 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSR 182 (327)
T ss_dssp CSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred cCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence 999999999953 58999999764
No 341
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.91 E-value=4e-09 Score=126.87 Aligned_cols=135 Identities=15% Similarity=0.170 Sum_probs=90.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........- ..-.+.+|+
T Consensus 31 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~ 75 (371)
T 2xrw_A 31 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT-----------------------------------HAKRAYREL 75 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eeeEecCCEEEEEEEECCCCceEEEEEeccccCChH-----------------------------------HHHHHHHHH
Confidence 68999999999999864 799999999864321100 001224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+...+.+-.++.... ...+|||||++| .+.+. ....++...+...+.+++ +..+|..|
T Consensus 76 ~~l~~l----~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~ 147 (371)
T 2xrw_A 76 VLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQV---IQMELDHERMSYLLYQMLCGIKHLHSAG 147 (371)
T ss_dssp HHHHHC----CCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc----CCCCccceEEeeccccccccccceEEEEEcCCC-CHHHH---HhhccCHHHHHHHHHHHHHHHHHHHHCC
Confidence 555444 3333344444543322 245899999987 34333 235677777766666655 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 148 ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 148 IIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp CCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999999999965 599999998643
No 342
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.91 E-value=3.8e-09 Score=131.24 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=90.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... + .-.+.+|.
T Consensus 68 ~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~--~---------------------------------~~~~~~E~ 112 (464)
T 3ttj_A 68 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQT--H---------------------------------AKRAYREL 112 (464)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHH--H---------------------------------HHHHHHHH
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEECccccChH--H---------------------------------HHHHHHHH
Confidence 68999999999999854 799999999865422110 0 01123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCC-----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKS-----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~-----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+...|.+-.++..-. ...+|||||++|... + .....++...+...+.+++ ++.+|..|
T Consensus 113 ~~l~~l----~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~-~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~ 184 (464)
T 3ttj_A 113 VLMKCV----NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLC-Q---VIQMELDHERMSYLLYQMLCGIKHLHSAG 184 (464)
T ss_dssp HHHHHC----CCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHH-H---HHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhC----CCCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHH-H---HHhhcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 555444 3333344444443221 234899999987522 2 2234577776666666655 88999999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|||+||+|||+. .++++|||....
T Consensus 185 iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 185 IIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred cccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 99999999999965 699999998643
No 343
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=98.91 E-value=3.1e-09 Score=125.92 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=96.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........- + ..-.+.+|+
T Consensus 47 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~------~~~~~~~E~ 92 (335)
T 2owb_A 47 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------H------QREKMSMEI 92 (335)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------H------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCH----------------------------H------HHHHHHHHH
Confidence 68999999999999976 689999999865421100 0 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 93 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~d 166 (335)
T 2owb_A 93 SIHRSL----AHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166 (335)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred HHHHhC----CCCCCCeEEEEEe-cCCeEEEEEecCCCCCHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecC
Confidence 555544 2333233333332 2345689999999999988643 235677777777666666 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 167 lkp~NIl~~~~~~~kl~Dfg~~~~ 190 (335)
T 2owb_A 167 LKLGNLFLNEDLEVKIGDFGLATK 190 (335)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEE
T ss_pred CCchhEEEcCCCCEEEeeccCcee
Confidence 999999964 599999997643
No 344
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.91 E-value=3.8e-09 Score=125.92 Aligned_cols=135 Identities=19% Similarity=0.198 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+........ .. .-.+.+|+
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~------~~~~~~E~ 74 (353)
T 3coi_A 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-----------------------------IF------AKRAYREL 74 (353)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSH-----------------------------HH------HHHHHHHH
T ss_pred eeEecCCCeEEEEEEECCCCCEEEEEEecccccch-----------------------------HH------HHHHHHHH
Confidence 78999999999999965 79999999986432110 00 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++..... .-+|||||++| .+.+. ....++...+...+.+++ +..+|..|
T Consensus 75 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~---~~~~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 75 LLLKHMQ----HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKI---MGLKFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSGGGCCCCEEEEECCSE-EGGGT---TTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCcccHhheEecccccccceeEEEEeccccC-CHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555542 3333444444432221 23899999986 55554 234577777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||++. .++++|||....
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999999999965 599999997643
No 345
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=98.91 E-value=3.5e-09 Score=123.28 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-... +-.+.+|+
T Consensus 15 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------------------~~~~~~e~ 57 (304)
T 2jam_A 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-------------------------------------DSSLENEI 57 (304)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECC-------------------------------------------HHHHHH
T ss_pred eeccCCCCceEEEEEECCCCCEEEEEEEecccccc-------------------------------------hHHHHHHH
Confidence 67999999999999975 89999999986432100 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +..-+.+-.++ ......+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 58 ~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 131 (304)
T 2jam_A 58 AVLKKIK----HENIVTLEDIY-ESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131 (304)
T ss_dssp HHHHHCC----CTTBCCEEEEE-ECSSEEEEEECCCCSCBHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHhCC----CCCeeehhhhc-ccCCEEEEEEEcCCCccHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 6665542 32223333333 23455689999999999987643 334567777666666655 7889999999999
Q ss_pred CCCCCCCC---C---eeEEecCCch
Q psy12972 566 PHSGNDVN---T---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv---~---~v~liDfG~~ 584 (1578)
++|.||++ . .++++|||..
T Consensus 132 ikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 132 LKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp CCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred CCHHHEEEecCCCCCCEEEccCCcc
Confidence 99999996 2 4899999965
No 346
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.91 E-value=2.2e-09 Score=128.20 Aligned_cols=146 Identities=21% Similarity=0.186 Sum_probs=95.2
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|+..+|+.||||+.++.....-.... +. + ... .-.+.+|++
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~------------~~---~-----~~~------~~~~~~E~~ 81 (362)
T 3pg1_A 28 RFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNI------------LS---D-----SFL------CKRVLREIR 81 (362)
T ss_dssp EEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEG------------GG---S-----HHH------HHHHHHHHH
T ss_pred EEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhh------------hh---h-----hhH------HHHHHHHHH
Confidence 689999999999999989999999998764332100000 00 0 000 012456676
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC----CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS----STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~----t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
.+.+++ +...+.+-.++.... ..-+|||||++| .+.+...-....++...+...+.+++ +..+|..|++
T Consensus 82 ~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv 156 (362)
T 3pg1_A 82 LLNHFH----HPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVV 156 (362)
T ss_dssp HHHHCC----CTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCC----CcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCE
Confidence 666653 333344444443221 235899999987 44443322223577777766666665 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 157 H~Dlkp~NIl~~~~~~~kl~Dfg~~~ 182 (362)
T 3pg1_A 157 HRDLHPGNILLADNNDITICDFNLAR 182 (362)
T ss_dssp CCCCCGGGEEECTTCCEEECCTTC--
T ss_pred ecCCChHHEEEcCCCCEEEEecCccc
Confidence 999999999965 59999999764
No 347
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.91 E-value=1.2e-09 Score=142.06 Aligned_cols=135 Identities=19% Similarity=0.200 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEec--CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+.+ +|+.||||+..+.-... . .-.+.+|
T Consensus 86 ~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~------------------------------~------~~~~~~E 129 (681)
T 2pzi_A 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAE------------------------------A------QAMAMAE 129 (681)
T ss_dssp EEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHH------------------------------H------HHHHHHH
T ss_pred EEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHH------------------------------H------HHHHHHH
Confidence 58999999999999975 69999999876432110 0 0123445
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeCCCCc----eEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWDKSST----RVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~~~t~----~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
++.+.++ .+...+.+-.++.+.... .+|||||++|.+|.+.. ...++...+...+.+++ +..+|..|
T Consensus 130 ~~~l~~l----~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g 202 (681)
T 2pzi_A 130 RQFLAEV----VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK---GQKLPVAEAIAYLLEILPALSYLHSIG 202 (681)
T ss_dssp HGGGGGC----CCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhc----CCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5444433 233323333333221111 48999999999998863 23678887777777766 88999999
Q ss_pred ccccCCCCCCCCCC--eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~--~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 203 iiHrDlkp~NIll~~~~~kl~DFG~a~~ 230 (681)
T 2pzi_A 203 LVYNDLKPENIMLTEEQLKLIDLGAVSR 230 (681)
T ss_dssp EECCCCSGGGEEECSSCEEECCCTTCEE
T ss_pred CeecccChHHeEEeCCcEEEEecccchh
Confidence 99999999999965 599999997643
No 348
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=98.91 E-value=2.3e-09 Score=123.51 Aligned_cols=136 Identities=15% Similarity=0.108 Sum_probs=94.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+..... + ..+-.+.+|+
T Consensus 20 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~-------------------------------~~~~~~~~e~ 65 (284)
T 2vgo_A 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK---E-------------------------------GVEHQLRREI 65 (284)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH---T-------------------------------TCHHHHHHHH
T ss_pred heecCCCCeEEEEEEEcCCCcEEEEEEEcccccch---H-------------------------------HHHHHHHHHH
Confidence 68999999999999975 78999999986532110 0 0011245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-..+. .....+|||||++|.+|.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 66 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~d 139 (284)
T 2vgo_A 66 EIQSHLR----HPNILRMYNYFH-DRKRIYLMLEFAPRGELYKELQ-KHGRFDEQRSATFMEELADALHYCHERKVIHRD 139 (284)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-CSSEEEEEECCCTTEEHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCC
T ss_pred HHHhcCC----CCCEeeEEEEEE-cCCEEEEEEEeCCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 5555542 222233323332 2345689999999999987643 234577777666666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCch
Q psy12972 566 PHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~ 584 (1578)
++|.||++. .++++|||..
T Consensus 140 l~p~Nil~~~~~~~kl~Dfg~~ 161 (284)
T 2vgo_A 140 IKPENLLMGYKGELKIADFGWS 161 (284)
T ss_dssp CSGGGEEECTTCCEEECCCTTC
T ss_pred CCHHHEEEcCCCCEEEeccccc
Confidence 999999964 5999999965
No 349
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.91 E-value=3.5e-09 Score=127.43 Aligned_cols=135 Identities=19% Similarity=0.220 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+......... .. -.+.+|+
T Consensus 48 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------~~------~~~~~E~ 92 (371)
T 4exu_A 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-----------------------------FA------KRAYREL 92 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHH-----------------------------HH------HHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCCEEEEEEecccccchh-----------------------------HH------HHHHHHH
Confidence 67999999999999965 799999999865332110 00 1234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC-----ceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS-----TRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t-----~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++..... .-+|||||++| .+.+ .....++...+...+.+++ +..+|..|
T Consensus 93 ~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 164 (371)
T 4exu_A 93 LLLKHMQ----HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQK---IMGMEFSEEKIQYLVYQMLKGLKYIHSAG 164 (371)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSSTTCCCCEEEEECCCE-EHHH---HTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcC----CCCchhhhhheeccCCcccceeEEEEEccccc-cHHH---HhhcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555543 3333444444433221 12899999986 3433 3345678777777666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||+. .++++|||....
T Consensus 165 ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 165 VVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred CcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999999999965 599999998643
No 350
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=98.91 E-value=2e-09 Score=126.76 Aligned_cols=132 Identities=17% Similarity=0.026 Sum_probs=91.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+..-... ..+..|+.
T Consensus 30 ~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~--------------------------------------~~~~~E~~ 70 (322)
T 3soc_A 30 EVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQS--------------------------------------WQNEYEVY 70 (322)
T ss_dssp EEEECSTTCEEEEEEET-TEEEEEEEECGGGHHH--------------------------------------HHHHHHHH
T ss_pred heecccCceEEEEEEEC-CCEEEEEEeecCchHH--------------------------------------HHHHHHHH
Confidence 68999999999999865 8999999986432110 01122443
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc----
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT---- 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~---- 559 (1578)
.+.++ .+..-+.+-.++.+-. ..-+|||||++|.+|.++. ....++...+...+.++. +..+|..
T Consensus 71 ~l~~l----~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l 144 (322)
T 3soc_A 71 SLPGM----KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGL 144 (322)
T ss_dssp TSTTC----CCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHH--HHCCBCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHhcC----CCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 33332 2333333333333211 1247999999999998874 456677777777666665 7788888
Q ss_pred ------CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 ------GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 ------G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|.|||+. .++++|||...
T Consensus 145 ~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp TTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred ccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 999999999999965 58999999764
No 351
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.91 E-value=1.3e-09 Score=129.87 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ +.+. -.+.+|+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------------------~~~~------~~~~~E~ 63 (346)
T 1ua2_A 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAK--------------------------DGIN------RTALREI 63 (346)
T ss_dssp EEEEEETTEEEEEEECSSCCSEEEEEEC--------------------------------------C------THHHHHH
T ss_pred eEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhh--------------------------hhhh------HHHHHHH
Confidence 67999999999999975 7999999998654221100 0000 1234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++. +...+.+-.++ ......+|||||++| .+.+........++...+...+.+++ +..+|..|++|+|
T Consensus 64 ~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D 137 (346)
T 1ua2_A 64 KLLQELS----HPNIIGLLDAF-GHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137 (346)
T ss_dssp HHHHHCC----CTTBCCEEEEE-CCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhhCC----CCCCCeEEEEE-eeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCC
Confidence 6665542 32223333333 234567899999998 55554322222355555555555554 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|||+. .++++|||....
T Consensus 138 lkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 138 LKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCGGGEEECTTCCEEECCCGGGST
T ss_pred CCHHHEEEcCCCCEEEEeccccee
Confidence 999999964 589999997643
No 352
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=98.91 E-value=2e-09 Score=126.60 Aligned_cols=136 Identities=19% Similarity=0.190 Sum_probs=82.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.+ +|+.||||+.+...... .. -.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------~~--------------~~~~~E~ 54 (317)
T 2pmi_A 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG----------------------TP--------------STAIREI 54 (317)
T ss_dssp --------CEEEEEECSSSCCEEEEEEEECCSTTC----------------------SC--------------HHHHHHH
T ss_pred eEECCCCCEEEEEEEECCCCcEEEEEEeecccccc----------------------cH--------------HHHHHHH
Confidence 57999999999999965 79999999986432110 00 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-----cCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-----KGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-----~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++ .+..-+.+-.++ .....-+|||||++| .|.+...... .+++...+...+.+++ +..+|..|
T Consensus 55 ~~l~~l----~hp~iv~~~~~~-~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ 128 (317)
T 2pmi_A 55 SLMKEL----KHENIVRLYDVI-HTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK 128 (317)
T ss_dssp HHHTTC----CBTTBCCEEEEE-CCTTEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhc----CCCCcceEEEEE-EECCeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 444443 222223332332 223456899999997 6665533222 2466666655555554 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.|||+. .++++|||....
T Consensus 129 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 129 ILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred eeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99999999999964 599999997643
No 353
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.90 E-value=2.3e-09 Score=125.81 Aligned_cols=140 Identities=19% Similarity=0.220 Sum_probs=93.1
Q ss_pred cccccccceEEEEEEe--cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+. .+|+.||||+.+...... .. ...+.+|
T Consensus 17 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--------------------~~---------------~~~~~~e 61 (326)
T 1blx_A 17 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--------------------GM---------------PLSTIRE 61 (326)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--------------------SC---------------BCTHHHH
T ss_pred eeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--------------------cC---------------CchhhHH
Confidence 6899999999999997 478999999987543211 00 0112344
Q ss_pred HHHHHHHHHhhCCCCCeeecEEee----CCCCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILW----DKSSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~----~~~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
++.++++.. +.+..-+.+-.++. +..+..+|||||++| +|.++.... ..+++...+...+.+++ +..+|..
T Consensus 62 ~~~l~~l~~-~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 62 VAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHH-TCCTTBCCEEEEEEEEECSSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhc-cCCCCeEeeeeeeeecccCCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 444555432 22333233333332 123446799999987 666653321 23477777777666666 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|++|+|++|+||++. .++++|||...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 999999999999964 58999999753
No 354
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=98.90 E-value=3.8e-09 Score=122.29 Aligned_cols=138 Identities=14% Similarity=0.041 Sum_probs=95.5
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||+|+........- + ..-.+.+|+
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------------------------~------~~~~~~~e~ 66 (294)
T 2rku_A 21 RFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKP----------------------------H------QREKMSMEI 66 (294)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSH----------------------------H------HHHHHHHHH
T ss_pred EEEeecCCEEEEEEEECCCCceEEEEEechhhccCH----------------------------H------HHHHHHHHH
Confidence 68999999999999976 689999999865431100 0 011234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-..+. .....+|||||++|.++.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 67 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 140 (294)
T 2rku_A 67 SIHRSL----AHQHVVGFHGFFE-DNDFVFVVLELCRRRSLLELHK-RRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140 (294)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred HHHHhC----CCCCEeeeeeeec-cCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 555444 2333233333332 2344579999999999988643 234577777777666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchhh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|.||++. .++++|||....
T Consensus 141 l~p~Nil~~~~~~~kl~dfg~~~~ 164 (294)
T 2rku_A 141 LKLGNLFLNEDLEVKIGDFGLATK 164 (294)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEE
T ss_pred CChHhEEEcCCCCEEEEeccCcee
Confidence 999999965 599999997643
No 355
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.90 E-value=2.4e-09 Score=132.53 Aligned_cols=136 Identities=18% Similarity=0.139 Sum_probs=82.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+......... ..-.+.+|+
T Consensus 59 ~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~-----------------------------------~~~~~~~E~ 103 (458)
T 3rp9_A 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLI-----------------------------------DCKRILREI 103 (458)
T ss_dssp CC-------CEEEEEECC--CEEEEEEECSTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHH-----------------------------------HHHHHHHHH
Confidence 67999999999999965 899999998854322110 001235566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
+.+.++. +...|.+-.++... ...-+|||||++| .|.++.. ....++...+...+.+++ ++.+|..|+
T Consensus 104 ~~l~~l~----h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~i 177 (458)
T 3rp9_A 104 AILNRLN----HDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFR-TPVYLTELHIKTLLYNLLVGVKYVHSAGI 177 (458)
T ss_dssp HHHHHCC----CTTBCCEEEECCCSCTTTCCCEEEEECCCSE-EHHHHHH-SSCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCC----CCCCCceEEEEecCCcccCceEEEEEecccc-chhhhcc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 6666652 33333333333211 1345899999865 5544422 223467776666666665 889999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|||+||+|||+. .++++|||...
T Consensus 178 iHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 178 LHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred CCCCCChhhEEECCCCCEeecccccch
Confidence 9999999999965 58999999764
No 356
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=98.90 E-value=3.8e-09 Score=124.56 Aligned_cols=137 Identities=15% Similarity=0.048 Sum_probs=94.7
Q ss_pred cccccccceEEEEEEec-CC-----CEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHh
Q psy12972 409 NPIAAASLAQVFRAVTK-EG-----VEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELD 482 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G-----~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElD 482 (1578)
+.||.|++|.||+|+.. +| +.||||+.++..... ..-.
T Consensus 52 ~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~ 95 (333)
T 2i1m_A 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD------------------------------------EKEA 95 (333)
T ss_dssp EEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHH------------------------------------HHHH
T ss_pred eEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChH------------------------------------HHHH
Confidence 67999999999999964 33 489999987543210 0112
Q ss_pred HHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------------hcCCCHHHHHHHH
Q psy12972 483 FLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------EKGFSLADVDRKL 548 (1578)
Q Consensus 483 f~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------~~~~~~~~v~~~l 548 (1578)
+.+|++.+.++. .++. +.+-.++ .....-+|||||++|.+|.++..-. ...++...+...+
T Consensus 96 ~~~E~~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (333)
T 2i1m_A 96 LMSELKIMSHLG----QHENIVNLLGAC-THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS 170 (333)
T ss_dssp HHHHHHHHHHHC----CCTTBCCEEEEE-CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred HHHHHHHHHhhc----CCCCeeeEEEEE-ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence 456777776662 2332 2222222 2345678999999999998875422 1235666666666
Q ss_pred HHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 549 FTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 549 ~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.+++ +..+|..|++|+|++|.|||+. .++++|||....
T Consensus 171 ~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 213 (333)
T 2i1m_A 171 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 213 (333)
T ss_dssp HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCC
T ss_pred HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccc
Confidence 6655 7889999999999999999975 589999997643
No 357
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.90 E-value=2.9e-09 Score=123.85 Aligned_cols=131 Identities=14% Similarity=0.060 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....- .+.+|.
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------------------------------------~~~~e~ 61 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------------------------------------------KARREV 61 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECSH------------------------------------------HHHHHH
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecccH------------------------------------------HHHHHH
Confidence 6799999999999996 489999999975310 012333
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
..+.+. ..+...+.+-.++... ...-+|||||++|.+|.+...... ..++...+...+.+++ +..+|..|+
T Consensus 62 ~~~~~~---~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 62 ELHWRA---SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHH---TTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHh---ccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 333222 1222333333443321 233579999999999988744221 2477777777666665 788999999
Q ss_pred cccCCCCCCCCCCe------eEEecCCch
Q psy12972 562 VHADPHSGNDVNTW------LYPVDLGDK 584 (1578)
Q Consensus 562 vH~DpHPGNilv~~------v~liDfG~~ 584 (1578)
+|+|++|.||++.. ++++|||..
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999652 777777754
No 358
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.90 E-value=2.4e-09 Score=134.03 Aligned_cols=145 Identities=16% Similarity=0.143 Sum_probs=95.3
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+.|.-. +.||.|++|.||+|+.+ +|+.||||+.+...... . .
T Consensus 34 ~~~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--------------------~-~----------- 79 (494)
T 3lij_A 34 HLSEMYQRV--KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST--------------------S-S----------- 79 (494)
T ss_dssp CHHHHEEEE--EEEECC---EEEEEEETTTCCEEEEEEEEC-------------------------C-T-----------
T ss_pred chhcCeEEe--eEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc--------------------h-H-----------
Confidence 345556554 68999999999999975 79999999986432110 0 0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
.-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 80 ---~~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~g~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~ 150 (494)
T 3lij_A 80 ---NSKLLEEVAVLKLL----DHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEII-HRMKFNEVDAAVIIKQVLSGVT 150 (494)
T ss_dssp ---THHHHHHHHHHTTC----CCTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhC----CCCCCCeEEEEEE-eCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 01234555555444 2333333333332 2345689999999999877542 345677776666666655 78
Q ss_pred HHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
.+|..|++|+|+||.|||+. .++++|||...
T Consensus 151 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp HHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred HHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 89999999999999999974 28999999763
No 359
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.90 E-value=5e-09 Score=123.07 Aligned_cols=137 Identities=15% Similarity=0.101 Sum_probs=91.8
Q ss_pred cccccccceEEEEEEe--cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHH
Q psy12972 409 NPIAAASLAQVFRAVT--KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNE 486 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l--~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~E 486 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-.. . -.+.+|
T Consensus 20 ~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~--------------------------------~------~~~~~e 61 (339)
T 1z57_A 20 DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY--------------------------------C------EAARSE 61 (339)
T ss_dssp EEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHH--------------------------------H------HHHHHH
T ss_pred EEEecCCCeEEEEEEecCCCCcEEEEEEEecCCch--------------------------------h------HHHHHH
Confidence 6799999999999986 37899999998642110 0 113456
Q ss_pred HHHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 487 GRNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 487 a~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
++.++++...-. .....+++++.. ....-+|||||+ |.++.+...-.. ..++...+...+.+++ +..+|..|+
T Consensus 62 ~~~l~~l~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 139 (339)
T 1z57_A 62 IQVLEHLNTTDP-NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139 (339)
T ss_dssp HHHHHHHHHHCT-TCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHhhhcCC-CCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC
Confidence 666666654311 111223333322 234568999999 777777643211 2466776666666665 788999999
Q ss_pred cccCCCCCCCCCC----------------------eeEEecCCchh
Q psy12972 562 VHADPHSGNDVNT----------------------WLYPVDLGDKF 585 (1578)
Q Consensus 562 vH~DpHPGNilv~----------------------~v~liDfG~~~ 585 (1578)
+|+|++|.|||+. .++++|||...
T Consensus 140 vH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~ 185 (339)
T 1z57_A 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185 (339)
T ss_dssp ECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCE
T ss_pred cCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccc
Confidence 9999999999964 37889999753
No 360
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=98.90 E-value=1.3e-09 Score=129.06 Aligned_cols=142 Identities=15% Similarity=0.102 Sum_probs=91.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+........+ ..-.+.+|+
T Consensus 32 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~--------------------------------~~~~~~~E~ 79 (345)
T 3hko_A 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK--------------------------------DVERIKTEV 79 (345)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---C--------------------------------HHHHHHHHH
T ss_pred ceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHH--------------------------------HHHHHHHHH
Confidence 68999999999999964 789999999875422110000 011346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh--------------------------------
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------------------------------- 535 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------------------------------- 535 (1578)
+.+.++. +...+.+-.++. .....+|||||++|.+|.+.....
T Consensus 80 ~~l~~l~----hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (345)
T 3hko_A 80 RLMKKLH----HPNIARLYEVYE-DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSI 154 (345)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC
T ss_pred HHHHhCC----CCCcceeehhhc-cCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccccccccc
Confidence 7776653 322233333332 234468999999999998764200
Q ss_pred -------hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC-----eeEEecCCchhhh
Q psy12972 536 -------EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT-----WLYPVDLGDKFRL 587 (1578)
Q Consensus 536 -------~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~-----~v~liDfG~~~~l 587 (1578)
...++...+...+.+++ +..+|..|++|+|++|.|||+. .++++|||....+
T Consensus 155 ~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~ 220 (345)
T 3hko_A 155 HGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEF 220 (345)
T ss_dssp --CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEG
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccc
Confidence 00012233333444444 7889999999999999999973 5899999976543
No 361
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.90 E-value=4.2e-09 Score=106.82 Aligned_cols=87 Identities=17% Similarity=0.361 Sum_probs=77.7
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCcccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQ 929 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~ 929 (1578)
.+++++|.||++||++|+...|.++++++.+. ++.+..|+++. +..++++|+|.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW- 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC-
Confidence 36799999999999999999999999999997 59999999977 678999999997
Q ss_pred CCcEEEE-cCCccccccC---CCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKE---PSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~---G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+.. .+. |..+.++|.+++++.+
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 9999999 788877 777 8899999999998754
No 362
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=98.90 E-value=3.1e-09 Score=122.66 Aligned_cols=136 Identities=22% Similarity=0.188 Sum_probs=95.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .. .-.+.+|+
T Consensus 28 ~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~---------------------~~--------------~~~~~~e~ 72 (287)
T 2wei_A 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN---------------------KD--------------TSTILREV 72 (287)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS---------------------SC--------------HHHHHHHH
T ss_pred EEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch---------------------HH--------------HHHHHHHH
Confidence 68999999999999976 79999999986543211 00 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. .....++||||++|.++.+... ....++...+...+.+++ +..+|..|++|+|
T Consensus 73 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~d 146 (287)
T 2wei_A 73 ELLKKL----DHPNIMKLFEILE-DSSSFYIVGELYTGGELFDEII-KRKRFSEHDAARIIKQVFSGITYMHKHNIVHRD 146 (287)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHhc----cCCCccEEEEEEe-CCCeEEEEEEccCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence 555554 2322233333332 2355689999999999877543 345677777777666665 7889999999999
Q ss_pred CCCCCCCCC------eeEEecCCchh
Q psy12972 566 PHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~------~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 147 l~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 147 LKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp CCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred CChhhEEEecCCCcccEEEeccCcce
Confidence 999999973 48999999653
No 363
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=98.90 E-value=2.1e-09 Score=125.72 Aligned_cols=131 Identities=17% Similarity=0.155 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. .|+.||||+....-. .-.|.+|++
T Consensus 14 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---------------------------------------~~~~~~E~~ 53 (307)
T 2eva_A 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIESESE---------------------------------------RKAFIVELR 53 (307)
T ss_dssp EEEECCSSSEEEEEEE-TTEEEEEEECSSTTH---------------------------------------HHHHHHHHH
T ss_pred eEeecCCCceEEEEEE-CCeeEEEEEecChhH---------------------------------------HHHHHHHHH
Confidence 6799999999999986 488999998753210 012455666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHH---cCc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQ---TGF 561 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~---~G~ 561 (1578)
.+.++. ++. |.+++.......+|||||++|.+|.++..-.. ...+...+...+.++. +..+|. .|+
T Consensus 54 ~l~~l~-----hp~--iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~i 126 (307)
T 2eva_A 54 QLSRVN-----HPN--IVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126 (307)
T ss_dssp HHHHCC-----CTT--BCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCC
T ss_pred HHhcCC-----CCC--cCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence 666552 232 34455545566789999999999988743111 1245666666555544 778888 899
Q ss_pred cccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
+|+|++|.|||+. .++++|||....
T Consensus 127 vH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 127 IHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp CCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred ecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 9999999999963 379999998643
No 364
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.90 E-value=3.3e-09 Score=124.17 Aligned_cols=134 Identities=17% Similarity=0.167 Sum_probs=92.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. ..||||+.+...... + ..-.|.+|++
T Consensus 42 ~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~-----------------------------~------~~~~~~~E~~ 84 (307)
T 3lb7_A 42 TRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTP-----------------------------E------QFQAFRNEVA 84 (307)
T ss_dssp EEEEECSSCEEEEEESS--SEEEEEECCCSSCCH-----------------------------H------HHHHHHHHHH
T ss_pred eEecCCCCeEEEEEEEC--CEEEEEEEecCCCCH-----------------------------H------HHHHHHHHHH
Confidence 57999999999999754 469999876422110 0 0012355665
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++. +...+.+-..+ .....++||||++|.+|.+........++...+...+.+++ +..+|..|++|+|+
T Consensus 85 ~l~~l~----h~~iv~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl 158 (307)
T 3lb7_A 85 VLRKTR----HVNILLFMGYM--TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158 (307)
T ss_dssp HHTTCC----CTTBCCEEEEE--CSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred HHHhCC----CCCEEEEEEEE--ccCcEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCC
Confidence 555442 22222222222 12445899999999999887544455677777776666665 78899999999999
Q ss_pred CCCCCCCC---eeEEecCCchh
Q psy12972 567 HSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~---~v~liDfG~~~ 585 (1578)
+|.|||+. .++++|||...
T Consensus 159 kp~NIll~~~~~~kl~DFg~a~ 180 (307)
T 3lb7_A 159 KSNNIFLHEGLTVKIGDFGLAT 180 (307)
T ss_dssp CSSSEEECTTSCEEECCCCSSC
T ss_pred ChhhEEEcCCCCEEEccCCCce
Confidence 99999965 59999999764
No 365
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=98.90 E-value=3.2e-09 Score=123.84 Aligned_cols=138 Identities=18% Similarity=0.119 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++.-... . ...-++.+|+
T Consensus 38 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----------------------~-----------~~~~~~~~E~ 83 (310)
T 2wqm_A 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD-----------------------A-----------KARADCIKEI 83 (310)
T ss_dssp EEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC-----------------------H-----------HHHHHHHHHH
T ss_pred EeecCCCCceEEEEEEcCCCceEEEEeeehhhccC-----------------------H-----------HHHHHHHHHH
Confidence 6899999999999996 489999999986521100 0 0011345566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.+.++. +...+.+-..+. .....+|||||++|.+|.++.... ...++...+...+.+++ +..+|..|++
T Consensus 84 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~ 158 (310)
T 2wqm_A 84 DLLKQLN----HPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158 (310)
T ss_dssp HHHHTCC----CTTBCCEEEEEE-ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHhCC----CCCEeeEEEEEE-cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 6665542 222223223322 134567999999999998875421 23467777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 159 H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 159 HRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp CCCCCGGGEEECTTSCEEECCC----
T ss_pred CCCCcHHHEEEcCCCCEEEEecccee
Confidence 999999999965 59999999764
No 366
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.90 E-value=3.5e-09 Score=128.93 Aligned_cols=146 Identities=12% Similarity=0.087 Sum_probs=92.4
Q ss_pred CCChhhhccccCCcccccccceEEEEEEec---CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHH
Q psy12972 396 GCTHSQLFRSFDENPIAAASLAQVFRAVTK---EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINE 472 (1578)
Q Consensus 396 G~~~~~iF~~fd~~PlasaSiaQVhrA~l~---~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e 472 (1578)
...+.+.|.. ..+.||.|++|.||+|+.+ +|+.||||+....-..
T Consensus 15 ~~~~~~~y~~-~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~------------------------------- 62 (405)
T 3rgf_A 15 RERVEDLFEY-EGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS------------------------------- 62 (405)
T ss_dssp CCCHHHHEEC-SSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC-------------------------------
T ss_pred hhhhhhhhhh-cCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC-------------------------------
Confidence 4567777764 3468999999999999965 6899999987532100
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-CCCceEEEEeccCCCcCCchhhHhh--------cCCCHHH
Q psy12972 473 LKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-KSSTRVLTTEFIDGVKISDKEGLLE--------KGFSLAD 543 (1578)
Q Consensus 473 ~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~~t~~VLVME~i~G~~l~d~~~l~~--------~~~~~~~ 543 (1578)
-.+.+|++.+.++. +...+.+-.++.. -...-+|||||++| .+.+...... ..++...
T Consensus 63 --------~~~~~E~~~l~~l~----hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~ 129 (405)
T 3rgf_A 63 --------MSACREIALLRELK----HPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGM 129 (405)
T ss_dssp --------HHHHHHHHHHHHCC----CTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHH
T ss_pred --------HHHHHHHHHHHhcC----CCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHH
Confidence 01245666665553 3333444445432 23456799999987 4444322111 1366666
Q ss_pred HHHHHHHHH--HHHHHHcCccccCCCCCCCCC-------CeeEEecCCchhh
Q psy12972 544 VDRKLFTAF--AEQIFQTGFVHADPHSGNDVN-------TWLYPVDLGDKFR 586 (1578)
Q Consensus 544 v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv-------~~v~liDfG~~~~ 586 (1578)
+...+.+++ +..+|..|++|+|+||.|||+ +.++++|||....
T Consensus 130 ~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~ 181 (405)
T 3rgf_A 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181 (405)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC-
T ss_pred HHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCcee
Confidence 666666655 788999999999999999998 3699999997643
No 367
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=98.90 E-value=2.3e-09 Score=122.83 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=81.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++..... .+. +-.+.+|+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~------~~~~~~e~ 64 (275)
T 2eue_A 19 KTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAK----------------------------SDM------QGRIEREI 64 (275)
T ss_dssp C---------EEEEECTTTCCEEEEEEECSCC---------------------------------C------HHHHHHHH
T ss_pred EEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcch----------------------------HHH------HHHHHHHH
Confidence 6799999999999985 489999999986542211 000 11234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.+++ +..-+.+-.++. .....+|||||+. ..+.+.. .....++...+...+.+++ +..+|..|++|+|
T Consensus 65 ~~l~~l~----h~~i~~~~~~~~-~~~~~~lv~e~~~-~~l~~~~-~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 137 (275)
T 2eue_A 65 SYLRLLR----HPHIIKLYDVIK-SKDEIIMVIEYAG-NELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRD 137 (275)
T ss_dssp HHHHHCC----CTTBCCEEEEEE-CSSCEEEEEECCC-EEHHHHH-HTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHhCC----CCCeEEEEEEEe-cCCeEEEEehhcC-CcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecc
Confidence 6665543 222233333332 2355689999994 4554432 1234577777766666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 138 ikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 138 LKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp CSGGGEEECTTSCEEECCSSCC-
T ss_pred CChHhEEECCCCCEEEeecccce
Confidence 999999965 59999999764
No 368
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.89 E-value=1.6e-09 Score=130.17 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=86.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..+ .-.++.|+
T Consensus 68 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~---------------------------------~~~~~~E~ 113 (371)
T 3q60_A 68 EPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENS-RSE---------------------------------LERLHEAT 113 (371)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTH-HHH---------------------------------HHHHHHHH
T ss_pred eeccCCCCEEEEEEEECCCCceeEEEEEEeccccc-ccH---------------------------------HHHHHHHH
Confidence 68999999999999965 89999999998753211 000 01234555
Q ss_pred HHHHHHHHhhCCCC------Ceeec-EEeeCCC----------------CceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 488 RNAERCSKDLAHLP------YVYIP-RILWDKS----------------STRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~------~v~vP-~v~~~~~----------------t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
+.+..++. .+.. .+.+| .++..-. ..-+|||||++ .+|.++..-..........
T Consensus 114 ~~~~~l~~--~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~ 190 (371)
T 3q60_A 114 FAAARLLG--ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGD 190 (371)
T ss_dssp HHHHHHHC------------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHH
T ss_pred HHHHHhcc--cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhh
Confidence 55555543 1111 12222 2221100 22589999998 5888775432222222211
Q ss_pred ------HHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 545 ------DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 545 ------~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
...+.+++ +..+|..|++|+|+||.|||+. .++++|||...
T Consensus 191 ~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~ 242 (371)
T 3q60_A 191 EGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALW 242 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceee
Confidence 12223333 7889999999999999999964 59999999764
No 369
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.89 E-value=3.6e-09 Score=122.87 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=93.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+....... -..+-.+.+|+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~---------------------------------~~~~~~~~~E~ 57 (305)
T 2wtk_C 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRI---------------------------------PNGEANVKKEI 57 (305)
T ss_dssp CEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHS---------------------------------TTHHHHHHHHH
T ss_pred eEEecCCCeEEEEEEECCCCcEEEEEEecccccccc---------------------------------chhHHHHHHHH
Confidence 68999999999999964 799999999864321100 00112345666
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchh-hHhhcCCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKE-GLLEKGFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~-~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+...+.+-.++. +-....+|||||++|. +.+.. ......++...+...+.+++ +..+|..|++|
T Consensus 58 ~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H 132 (305)
T 2wtk_C 58 QLLRRL----RHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132 (305)
T ss_dssp HHHTTC----CCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHhc----CCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 666554 2333344444442 2234568999999987 44432 22234577777666666655 78899999999
Q ss_pred cCCCCCCCCCC---eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 133 ~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 133 KDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp SCCSGGGEEECTTCCEEECCCTTCE
T ss_pred cCCCcccEEEcCCCcEEeecccccc
Confidence 99999999964 58999999764
No 370
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.89 E-value=3.3e-09 Score=108.74 Aligned_cols=86 Identities=21% Similarity=0.406 Sum_probs=77.3
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
..++++|.||++||++|+...|.+.++++.+...++.+..|+++. +..+++.|+|
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 578999999999999999999999999999986669999999964 5689999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHH
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++
T Consensus 113 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 IT-IPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CE-ESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred Cc-cCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 98 9999999 8898877777989999998886
No 371
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.89 E-value=3.6e-09 Score=130.11 Aligned_cols=136 Identities=19% Similarity=0.165 Sum_probs=91.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+..|.
T Consensus 103 ~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~--------------------------------~------~~~~~E~ 144 (429)
T 3kvw_A 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF--------------------------------H------RQAAEEI 144 (429)
T ss_dssp EEEEESSSEEEEEEEETTTTEEEEEEEECSCHHH--------------------------------H------HHHHHHH
T ss_pred EEcccCccEEEEEEEECCCCcEEEEEEECCccch--------------------------------H------HHHHHHH
Confidence 68999999999999865 6999999998653110 0 1124455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCchhhHh-hcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDKEGLL-EKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~~~l~-~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+.++.++..- ......|.+++..+ ...-+|||||++| .+.++.... ..+++...+...+.+++ +..+|..|++
T Consensus 145 ~~l~~l~~~~-~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 222 (429)
T 3kvw_A 145 RILEHLRKQD-KDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222 (429)
T ss_dssp HHHHHHHTTC-TTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEE
T ss_pred HHHHHHhhcc-ccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5555555321 11222334443322 3456799999976 565543322 23477777666666655 7889999999
Q ss_pred ccCCCCCCCCCC---e--eEEecCCch
Q psy12972 563 HADPHSGNDVNT---W--LYPVDLGDK 584 (1578)
Q Consensus 563 H~DpHPGNilv~---~--v~liDfG~~ 584 (1578)
|+|+||.|||+. . ++++|||..
T Consensus 223 HrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 223 HCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp CSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred cCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999999965 2 899999976
No 372
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.89 E-value=7.6e-10 Score=130.53 Aligned_cols=135 Identities=17% Similarity=0.161 Sum_probs=88.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+....... ...+.+|+
T Consensus 8 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~E~ 51 (324)
T 3mtl_A 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA------------------------------------PCTAIREV 51 (324)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEECC------------------------------------------CCCCCCCH
T ss_pred EEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc------------------------------------chhHHHHH
Confidence 57999999999999976 899999999864322110 00112344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++ ......+|||||++| .+.+...-....++...+...+.+++ +..+|..|++|+|
T Consensus 52 ~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 125 (324)
T 3mtl_A 52 SLLKDL----KHANIVTLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRD 125 (324)
T ss_dssp HHHSCC----CCTTBCCEEEEE-ECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHhc----CCCCCCeeeeEE-eeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCC
Confidence 444333 222223332333 223456899999987 55554332233467676666665655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 126 ikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 126 LKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp CCGGGEEECTTCCEEECSSSEEE
T ss_pred cCHHHEEECCCCCEEEccCcccc
Confidence 999999964 59999999753
No 373
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.89 E-value=1.6e-09 Score=128.93 Aligned_cols=138 Identities=21% Similarity=0.246 Sum_probs=92.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+........ .. ...+.+|+
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------~~---------------~~~~~~E~ 67 (351)
T 3mi9_A 23 AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--------------------GF---------------PITALREI 67 (351)
T ss_dssp EECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--------------------SS---------------CHHHHHHH
T ss_pred EEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--------------------cc---------------hHHHHHHH
Confidence 6799999999999997 489999999875432110 00 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-------CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-------SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-------~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +...+.+-.++... .+.-+|||||++| .+.+........++...+...+.+++ +..+|.
T Consensus 68 ~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 68 KILQLLK----HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp HHHHHCC----CTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc----CCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6665553 33333333333321 2345799999987 44333222234577777766666665 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
.|++|+|++|.|||+. .++++|||....
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 9999999999999965 599999997643
No 374
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.89 E-value=3.3e-09 Score=127.63 Aligned_cols=136 Identities=17% Similarity=0.181 Sum_probs=83.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
++||.|++|.||+|+. .+|+.||||+......... ..-.+.+|+
T Consensus 35 ~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~-----------------------------------~~~~~~~E~ 79 (367)
T 2fst_X 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSII-----------------------------------HAKRTYREL 79 (367)
T ss_dssp EECC----CCEEEEEETTTTEEEEEEECSSTTSSHH-----------------------------------HHHHHHHHH
T ss_pred eEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHH-----------------------------------HHHHHHHHH
Confidence 6899999999999985 5899999999864322100 001224455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC-----CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK-----SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~-----~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G 560 (1578)
+.+.++. +...+.+-.++... ...-+||||++ |.+|.++. ....++...+...+.+++ +..+|..|
T Consensus 80 ~~l~~l~----hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g 152 (367)
T 2fst_X 80 RLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSAD 152 (367)
T ss_dssp HHHHHCC----CTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCC----CCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 5555542 33334444444321 13458999999 77888764 345677777766666665 78899999
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|+|||+. .++++|||....
T Consensus 153 ivH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 153 IIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCCCCCCGGGEEECTTCCEEECC------
T ss_pred eeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 99999999999965 599999997643
No 375
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.88 E-value=3.3e-09 Score=122.25 Aligned_cols=137 Identities=19% Similarity=0.146 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec--CCC--EEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK--EGV--EVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~--~G~--~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|+||+|+.. +|+ .||||+.++.....- ...-++.
T Consensus 24 ~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~ 69 (291)
T 1u46_A 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP----------------------------------EAMDDFI 69 (291)
T ss_dssp EECC----CCCEEEEEECTTSCEEEEEEEC--------C----------------------------------HHHHHHH
T ss_pred eeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCH----------------------------------HHHHHHH
Confidence 67999999999999853 344 699998876432100 0011345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|++.+.++. +..-+.+-.++. ....++||||++|.+|.+...-....++...+...+.+++ +..+|..|++
T Consensus 70 ~e~~~l~~l~----h~~i~~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 143 (291)
T 1u46_A 70 REVNAMHSLD----HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFI 143 (291)
T ss_dssp HHHHHHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhCC----CCCcccEEEEEc--cCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6666666652 333334434432 3446899999999999887544345577777777666666 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.||++. .++++|||...
T Consensus 144 H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 144 HRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred cCCCchheEEEcCCCCEEEccccccc
Confidence 999999999964 58999999754
No 376
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=98.88 E-value=5.2e-09 Score=122.39 Aligned_cols=135 Identities=14% Similarity=0.070 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+....-... .-.+.+|+
T Consensus 35 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E~ 77 (317)
T 2buj_A 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQD-------------------------------------REEAQREA 77 (317)
T ss_dssp EEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHH-------------------------------------HHHHHHHH
T ss_pred EEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHH-------------------------------------HHHHHHHH
Confidence 6899999999999996 589999999876532110 01234555
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC---CCCceEEEEeccCCCcCCchhhHh---hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD---KSSTRVLTTEFIDGVKISDKEGLL---EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~---~~t~~VLVME~i~G~~l~d~~~l~---~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
+.+.++ .+..-+.+-..+.. .....++||||++|.+|.+..... ...++...+...+.+++ +..+|..
T Consensus 78 ~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 153 (317)
T 2buj_A 78 DMHRLF----NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153 (317)
T ss_dssp HHHHTC----CCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhc----CCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 555444 23222333333321 123457999999999998865421 24577777777666665 7889999
Q ss_pred CccccCCCCCCCCCC---eeEEecCCch
Q psy12972 560 GFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 560 G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
|++|+|++|.||++. .++++|||..
T Consensus 154 ~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 154 GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999974 5999999964
No 377
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=98.88 E-value=5.5e-09 Score=122.24 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=94.4
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+..+..... .+.. -.+.+|+
T Consensus 40 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------------------------~~~~------~~~~~e~ 85 (309)
T 2h34_A 40 RLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD----------------------------PVFR------TRMQREA 85 (309)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS----------------------------HHHH------HHHHHHH
T ss_pred EEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC----------------------------HHHH------HHHHHHH
Confidence 68999999999999965 79999999987543211 0001 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. .....+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 86 ~~l~~l----~hp~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~d 159 (309)
T 2h34_A 86 RTAGRL----QEPHVVPIHDFGE-IDGQLYVDMRLINGVDLAAMLR-RQGPLAPPRAVAIVRQIGSALDAAHAAGATHRD 159 (309)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCCCEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhhc----CCCCeeEEEEEEe-eCCeEEEEEEecCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCC
Confidence 555443 2222233323322 2355689999999999988743 234577777766666665 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.||++. .++++|||...
T Consensus 160 lkp~NIl~~~~~~~kl~Dfg~~~ 182 (309)
T 2h34_A 160 VKPENILVSADDFAYLVDFGIAS 182 (309)
T ss_dssp CCGGGEEECTTSCEEECSCCC--
T ss_pred CChHHEEEcCCCCEEEecCccCc
Confidence 999999964 59999999764
No 378
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.88 E-value=2.3e-09 Score=124.12 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=89.1
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.+...... .. .-.+.+|+
T Consensus 9 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----------------------------~~------~~~~~~e~ 53 (299)
T 2r3i_A 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-----------------------------GV------PSTAIREI 53 (299)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEC-------------------------------------C------CHHHHHHH
T ss_pred hhhccCCCeeEEEEEEcCCCceEEEEEeecCccch-----------------------------hh------HHHHHHHH
Confidence 67999999999999976 79999999886432110 00 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++ .+..-+.+-.++. ....-+|||||++| ++.+...... .+++...+...+.+++ +..+|..|++|+
T Consensus 54 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 127 (299)
T 2r3i_A 54 SLLKEL----NHPNIVKLLDVIH-TENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127 (299)
T ss_dssp HHHTTC----CCTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHc----CCCCeeeEEEEEe-cCCceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCC
Confidence 555443 2222223323332 23456899999986 6666533221 3567666666665555 788999999999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 128 dlkp~Nili~~~~~~kl~dfg~~~~ 152 (299)
T 2r3i_A 128 DLKPQNLLINTEGAIKLADFGLARA 152 (299)
T ss_dssp CCCGGGEEECTTSCEEECSTTHHHH
T ss_pred CCCHHHeEEcCCCCEEECcchhhhh
Confidence 9999999964 599999997644
No 379
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.87 E-value=2.6e-09 Score=124.81 Aligned_cols=140 Identities=17% Similarity=0.171 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. +|+.||||+.++.....- ..-.+.
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~ 84 (313)
T 3brb_A 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR-----------------------------------EIEEFL 84 (313)
T ss_dssp EEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHH-----------------------------------HHHHHH
T ss_pred cceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchh-----------------------------------HHHHHH
Confidence 57999999999999865 456899999865421100 001245
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCC----ceEEEEeccCCCcCCchhhHh-----hcCCCHHHHHHHHHHHH--H
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSS----TRVLTTEFIDGVKISDKEGLL-----EKGFSLADVDRKLFTAF--A 553 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t----~~VLVME~i~G~~l~d~~~l~-----~~~~~~~~v~~~l~~~~--l 553 (1578)
+|++.+.++. +...+.+-.++.+... ..++||||++|.+|.++.... ...++...+...+.+++ +
T Consensus 85 ~e~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL 160 (313)
T 3brb_A 85 SEAACMKDFS----HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160 (313)
T ss_dssp HHHHHHHTCC----CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC----CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHH
Confidence 5666665553 3333444444433221 238999999999998875321 23467777777666665 7
Q ss_pred HHHHHcCccccCCCCCCCCCC---eeEEecCCchhhh
Q psy12972 554 EQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKFRL 587 (1578)
Q Consensus 554 ~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~~l 587 (1578)
..+|..|++|+|++|.||++. .++++|||....+
T Consensus 161 ~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~ 197 (313)
T 3brb_A 161 EYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKI 197 (313)
T ss_dssp HHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC---
T ss_pred HHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceec
Confidence 889999999999999999965 5999999976443
No 380
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.87 E-value=1.6e-09 Score=127.62 Aligned_cols=136 Identities=15% Similarity=0.054 Sum_probs=89.8
Q ss_pred cccccccceEEEEEEec-CCCE----EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVE----VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~----VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+. ||+|+........ .. -.+
T Consensus 19 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~--------------------~~----------------~~~ 62 (325)
T 3kex_A 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ--------------------SF----------------QAV 62 (325)
T ss_dssp EEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS--------------------CB----------------CSC
T ss_pred eeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH--------------------HH----------------HHH
Confidence 68999999999999964 6665 7777664322110 00 012
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++ .+..-+.+-.++. ....++||||++|.+|.+...-....++...+...+.+++ +..+|..|+
T Consensus 63 ~~e~~~l~~l----~h~~iv~~~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 136 (325)
T 3kex_A 63 TDHMLAIGSL----DHAHIVRLLGLCP--GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136 (325)
T ss_dssp CHHHHHHHTC----CCTTBCCEEEEEC--BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcC----CCCCcCeEEEEEc--CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3444444333 2322233323321 3456799999999999887543234566666666655555 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 137 vH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 137 VHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp CCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred CCCccchheEEECCCCeEEECCCCcccc
Confidence 9999999999974 599999998743
No 381
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=98.87 E-value=1.8e-09 Score=113.68 Aligned_cols=89 Identities=16% Similarity=0.293 Sum_probs=76.1
Q ss_pred CCCcEEEEEE-cCCCcccccccHHH---HHHHHHhCCCceEEEEEECccch-----------hhHhHcCccccCCcEEEE
Q psy12972 872 YTTPHLILFY-SDWCFACLQVEPIF---KKLMDELSPLGVGFFTVHVHNEQ-----------GLARRLGVGSQLPQIALL 936 (1578)
Q Consensus 872 ~~~~~LV~Fy-apwCg~Ck~l~p~~---~~lA~~l~~~~v~~a~VDc~~~~-----------~L~~k~gV~~~~PTl~lf 936 (1578)
.+++++|.|| ++||++|+.+.|.+ .++++.+.. ++.++.||++... +++++|+|.+ +||++++
T Consensus 46 ~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~-~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~-~Pt~~~~ 123 (154)
T 2ju5_A 46 DHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGV-HLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTG-FPELVFI 123 (154)
T ss_dssp HCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCS-SSEEEEE
T ss_pred CCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcC-cEEEEEecCccccCCChhhHhhHHHHHHHcCCCC-CCEEEEE
Confidence 3689999999 99999999999999 777666533 3899999998754 8999999998 9999999
Q ss_pred -cCCccccccCCCC--CHHHHHHHHHhhCC
Q psy12972 937 -TDGRTSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 937 -~~G~~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
++|+.+... |.. +.+.+.+++.+.+.
T Consensus 124 d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 124 DAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp CTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 889888777 877 88999999987653
No 382
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.87 E-value=2.1e-09 Score=124.40 Aligned_cols=133 Identities=16% Similarity=0.148 Sum_probs=88.1
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||+|++|.||+|+.. ..||||+.+...... .+ .-.|.+|++
T Consensus 30 ~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~--~~---------------------------------~~~~~~E~~ 72 (289)
T 3og7_A 30 QRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTP--QQ---------------------------------LQAFKNEVG 72 (289)
T ss_dssp EEEEECSSEEEEEEESS--SEEEEEEESCSSCCH--HH---------------------------------HHHHHHHHH
T ss_pred eEecCCCCeEEEEEEEc--CceEEEEEeccCCCH--HH---------------------------------HHHHHHHHH
Confidence 68999999999999754 469999986542210 00 012345555
Q ss_pred HHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++. + +.+ ..++. ......++||||++|.+|.+........++...+...+.+++ +..+|..|++|+|
T Consensus 73 ~l~~l~----h-~~i--v~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~D 145 (289)
T 3og7_A 73 VLRKTR----H-VNI--LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145 (289)
T ss_dssp HHTTCC----C-TTB--CCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHhCC----C-CcE--EEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 554432 2 222 22222 223456899999999999876543345577777766666655 7889999999999
Q ss_pred CCCCCCCCC---eeEEecCCchh
Q psy12972 566 PHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 566 pHPGNilv~---~v~liDfG~~~ 585 (1578)
++|.|||+. .++++|||...
T Consensus 146 lkp~Nil~~~~~~~kl~Dfg~~~ 168 (289)
T 3og7_A 146 LKSNNIFLHEDNTVKIGDFGLAT 168 (289)
T ss_dssp CCGGGEEEETTTEEEECCCC---
T ss_pred CccceEEECCCCCEEEccceecc
Confidence 999999964 69999999764
No 383
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.87 E-value=5.3e-09 Score=105.80 Aligned_cols=87 Identities=17% Similarity=0.367 Sum_probs=77.0
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-----------------------chhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-----------------------EQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-----------------------~~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.++++++.+. ++.++.|+++. +..+++.|+|.+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 101 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQ 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCC
Confidence 36799999999999999999999999999987 58999999843 568999999997
Q ss_pred cCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+.. .+.|..+.++|.+++.+.+
T Consensus 102 -~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 102 -QPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp -SSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred -CceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 9999999 688877 6678899999999998765
No 384
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.87 E-value=2.3e-09 Score=133.68 Aligned_cols=146 Identities=21% Similarity=0.172 Sum_probs=98.6
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ ..+.
T Consensus 23 ~~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~--------------------~~~~---------- 70 (484)
T 3nyv_A 23 IFSDRYKGQ--RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ--------------------KTDK---------- 70 (484)
T ss_dssp CHHHHEEEE--EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB--------------------SSCH----------
T ss_pred cccCceEEe--eEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc--------------------chHH----------
Confidence 344555543 68999999999999976 89999999975431100 0010
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HH
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++ +.
T Consensus 71 ----~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~i~~qi~~~l~ 140 (484)
T 3nyv_A 71 ----ESLLREVQLLKQL----DHPNIMKLYEFFE-DKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGIT 140 (484)
T ss_dssp ----HHHHHHHHHHTTC----CCTTBCCEEEEEE-CSSEEEEEECCCCSCBHHHHHH-TCSCCBHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhC----CCCCCCcEEEEEE-eCCEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Confidence 1234555555444 2322233333332 2345689999999999977542 334577777666666655 78
Q ss_pred HHHHcCccccCCCCCCCCC------CeeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVN------TWLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv------~~v~liDfG~~~ 585 (1578)
.+|..|++|+|+||.|||+ +.++++|||...
T Consensus 141 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp HHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred HHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 8999999999999999997 258999999764
No 385
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.87 E-value=6.5e-09 Score=119.70 Aligned_cols=137 Identities=12% Similarity=0.048 Sum_probs=83.8
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.++....... ..+..|.
T Consensus 13 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~------------------------------------~~~~~~~ 56 (290)
T 3fme_A 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQ------------------------------------KRLLMDL 56 (290)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHH------------------------------------HHHHHHH
T ss_pred HhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHH------------------------------------HHHHHHH
Confidence 6799999999999996 48999999998754321100 0001111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH---hhcCCCHHHHHHHHHHHH--HHHHHHc-Cc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL---LEKGFSLADVDRKLFTAF--AEQIFQT-GF 561 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l---~~~~~~~~~v~~~l~~~~--l~~i~~~-G~ 561 (1578)
.. ....+.+...+.+-..+. .....+|||||++| ++.+.... ....++...+...+.+++ +..+|.. |+
T Consensus 57 ~~---~~~~~~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i 131 (290)
T 3fme_A 57 DI---SMRTVDCPFTVTFYGALF-REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131 (290)
T ss_dssp HH---HHTTCCCTTBCCEEEEEE-CSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HH---HHHhCCCCeEEEEeeeee-ccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 11 111222222233333332 24567899999987 65554221 224577777666666655 7889998 99
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|++|.||++. .++++|||....
T Consensus 132 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 132 IHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp CCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred ecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 9999999999965 599999997643
No 386
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=98.87 E-value=4.2e-09 Score=122.80 Aligned_cols=141 Identities=17% Similarity=0.159 Sum_probs=88.8
Q ss_pred hhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHH
Q psy12972 399 HSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPL 477 (1578)
Q Consensus 399 ~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l 477 (1578)
+.+-|... +.||.|++|.||+|+.. +|+.||||+....-...
T Consensus 9 ~~~~y~~~--~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------- 51 (320)
T 2i6l_A 9 LGSRYMDL--KPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQS----------------------------------- 51 (320)
T ss_dssp ETTTEEEE--EECC-----CEEEEEETTTTEEEEEEEEECCSHHH-----------------------------------
T ss_pred cCCceeEE--EEeccCCCeEEEEEEECCCCeEEEEEEEecCChHH-----------------------------------
Confidence 33444444 68999999999999976 59999999876432110
Q ss_pred HHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeC-------------CCCceEEEEeccCCCcCCchhhHhhcCCCHHHH
Q psy12972 478 EQELDFLNEGRNAERCSKDLAHLPYVYIPRILWD-------------KSSTRVLTTEFIDGVKISDKEGLLEKGFSLADV 544 (1578)
Q Consensus 478 ~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~-------------~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v 544 (1578)
.-.+.+|++.+.++ .+...+.+-.++.. .....+|||||++| +|.+. +....++...+
T Consensus 52 --~~~~~~e~~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~--~~~~~~~~~~~ 122 (320)
T 2i6l_A 52 --VKHALREIKIIRRL----DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV--LEQGPLLEEHA 122 (320)
T ss_dssp --HHHHHHHHHHHHTC----CCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSE-EHHHH--HTTCCCCHHHH
T ss_pred --HHHHHHHHHHHHhc----CCCCeeEEEEeccccccccccccccccccCceeEEeeccCC-CHHHH--hhcCCccHHHH
Confidence 00134455555444 23222333333211 12345799999986 67665 34456777766
Q ss_pred HHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 545 DRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 545 ~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
...+.+++ +..+|..|++|+|++|.||++. .++++|||...
T Consensus 123 ~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~ 169 (320)
T 2i6l_A 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred HHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence 66665555 7889999999999999999973 58999999764
No 387
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.87 E-value=5.3e-10 Score=129.57 Aligned_cols=131 Identities=16% Similarity=0.137 Sum_probs=78.3
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+..+.-.. ++..|++
T Consensus 9 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~----------------------------------------~~~~e~~ 47 (303)
T 3gxj_A 9 ESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER----------------------------------------SWFREAE 47 (303)
T ss_dssp EEEEECSSSEEEEC-C-TTSCEEEEECC-TTHH----------------------------------------HHHHHHH
T ss_pred hhccCCCCeEEEEEEE-cCcceEEEEecccchh----------------------------------------hHHHHHH
Confidence 6799999999999976 5999999997643211 1122322
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---CceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHH------
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---STRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIF------ 557 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~------ 557 (1578)
.+.... +.+..-+.+-..+..-. ..-+|||||++|.+|.++. ....++...+...+.++. +..+|
T Consensus 48 ~~~~~~--~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~ 123 (303)
T 3gxj_A 48 IYQTVM--LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123 (303)
T ss_dssp HHTSTT--CCC-CBCCEEEEEEEECSSSEEEEEEEECCTTCCHHHHH--HHCCBCC-CHHHHC-CHHHHHC-CCCCBCST
T ss_pred HHHHHh--ccCcceeeeeeecccCCCccceeEEEEeccCCCCHHHHH--hccCcchHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 222211 22222233333322211 1347999999999998874 445566555555444444 66778
Q ss_pred --HcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 558 --QTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
..|++|+|++|.|||+. .++++|||..
T Consensus 124 ~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp TCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred ccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 88999999999999975 4778888865
No 388
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.86 E-value=3e-09 Score=126.17 Aligned_cols=151 Identities=13% Similarity=0.046 Sum_probs=96.5
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+. +|+.||||+.+.......... .............. -.+.+|++
T Consensus 37 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~----------~~~~~~~~~~~~~~----------~~~~~E~~ 95 (348)
T 2pml_X 37 RTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDF----------TKSNNDKISIKSKY----------DDFKNELQ 95 (348)
T ss_dssp EEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEE----------CCCSSSSCCEEEHH----------HHHHHHHH
T ss_pred EEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhh----------ccccchhhhHHhHH----------HHHHHHHH
Confidence 6899999999999998 999999999875432210000 00000000000000 12456666
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhh----Hh---hcCCCHHHHHHHHHHHH--HHHHHH-
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEG----LL---EKGFSLADVDRKLFTAF--AEQIFQ- 558 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~----l~---~~~~~~~~v~~~l~~~~--l~~i~~- 558 (1578)
.+.++. +..-+.+-.++.+ ...-+|||||++|.+|.++.. +. ...++...+...+.+++ +..+|.
T Consensus 96 ~l~~l~----h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 170 (348)
T 2pml_X 96 IITDIK----NEYCLTCEGIITN-YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE 170 (348)
T ss_dssp HHTTCC----CTTBCCCSEEEES-SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCC----CCCcceEEEEEee-CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 665552 2222333333332 345689999999999998621 11 34567776666666655 788998
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|++|+|++|.||++. .++++|||...
T Consensus 171 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 200 (348)
T 2pml_X 171 KNICHRDVKPSNILMDKNGRVKLSDFGESE 200 (348)
T ss_dssp SCEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred CCEeecCCChHhEEEcCCCcEEEecccccc
Confidence 9999999999999964 58999999764
No 389
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.86 E-value=5.5e-09 Score=131.06 Aligned_cols=154 Identities=16% Similarity=0.148 Sum_probs=97.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEec-CCCEEEEEEecchhhhh--HHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRER--FVGDIATVQTLLRIAGFLYPKFDFQWVINELK 474 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~--~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~ 474 (1578)
.+.+-|.-. +.||.|++|.||+|+.+ +|+.||||+........ ...+ ....+...
T Consensus 33 ~i~~~Y~~~--~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--------------------~~~~~~~~ 90 (504)
T 3q5i_A 33 KIGESYFKV--RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDD--------------------NKNIEKFH 90 (504)
T ss_dssp CGGGTEEEE--EEEEC--CEEEEEEEETTTCCEEEEEEEEC------------------------------------CTH
T ss_pred CcccceEEE--eEecccCCeEEEEEEECCCCcEEEEEEEEhhhccccccccc--------------------chhhHHHH
Confidence 345555554 78999999999999975 78999999986542110 0000 00000111
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 475 VPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 475 ~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
-.+.+|++.+.++ .+...+.+-.++. .....+|||||++|.+|.+... ....++...+...+.+++
T Consensus 91 ------~~~~~E~~~l~~l----~hpniv~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~ 158 (504)
T 3q5i_A 91 ------EEIYNEISLLKSL----DHPNIIKLFDVFE-DKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANIMKQILSG 158 (504)
T ss_dssp ------HHHHHHHHHHHTC----CCTTBCCEEEEEE-CSSEEEEEEECCTTCBHHHHHH-HHSCCCHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHhC----CCCCCCeEEEEEE-cCCEEEEEEecCCCCcHHHHHH-HcCCCCHHHHHHHHHHHHHH
Confidence 1245566666554 2333233333332 2345689999999999977643 345677777777666665
Q ss_pred HHHHHHcCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 159 l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 197 (504)
T 3q5i_A 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS 197 (504)
T ss_dssp HHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred HHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence 7889999999999999999964 48999999764
No 390
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.86 E-value=3.6e-09 Score=124.90 Aligned_cols=136 Identities=15% Similarity=0.078 Sum_probs=90.4
Q ss_pred cccccccceEEEEEEec-CCCE----EEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVE----VAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~----VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+. ||||+.+...... ..-.|
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------~~~~~ 64 (327)
T 3poz_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK------------------------------------ANKEI 64 (327)
T ss_dssp EEEEEETTEEEEEEEECC----CCEEEEEEEC-------------------------------------------CHHHH
T ss_pred eEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHH------------------------------------HHHHH
Confidence 68999999999999954 6665 4666654321110 01134
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++. +...+.+-.++. .....++|||++|.++.+...-....++...+...+.+++ +..+|..|+
T Consensus 65 ~~E~~~l~~l~----h~~iv~~~~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i 138 (327)
T 3poz_A 65 LDEAYVMASVD----NPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138 (327)
T ss_dssp HHHHHHHHHCC----BTTBCCEEEEEE--SSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCEeEEEEEEe--cCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 66777776653 222233333332 3456799999999999887543345577777766666665 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 139 vH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 139 VHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp CCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred eCCCCChheEEECCCCCEEEccCcceeE
Confidence 9999999999964 599999997643
No 391
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=98.85 E-value=2e-09 Score=127.22 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=91.2
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+...... ... -.+.+|+
T Consensus 40 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~~~------~~~~~E~ 84 (329)
T 3gbz_A 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE-----------------------------GVP------GTAIREV 84 (329)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEECCCCC-------------------------------------------CHHHH
T ss_pred EEEEecCCeEEEEEEECCCCceEEEEEEccccccc-----------------------------ccc------hhHHHHH
Confidence 68999999999999854 89999999986542211 000 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
+.+.++ .+...+.+-.++. ....-+|||||++| .|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 85 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~-~L~~~~~-~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~D 157 (329)
T 3gbz_A 85 SLLKEL----QHRNIIELKSVIH-HNHRLHLIFEYAEN-DLKKYMD-KNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD 157 (329)
T ss_dssp HHGGGC----CCTTBCCEEEEEE-ETTEEEEEEECCSE-EHHHHHH-HCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred HHHHHc----CCCCcceEEEEEe-cCCEEEEEEecCCC-CHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCC
Confidence 554443 2333333333332 23456899999987 6665532 233577776666666655 7889999999999
Q ss_pred CCCCCCCCC--------eeEEecCCchhhh
Q psy12972 566 PHSGNDVNT--------WLYPVDLGDKFRL 587 (1578)
Q Consensus 566 pHPGNilv~--------~v~liDfG~~~~l 587 (1578)
++|.|||+. .++++|||....+
T Consensus 158 lkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 158 LKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 999999973 3899999976443
No 392
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=98.85 E-value=5.5e-09 Score=119.71 Aligned_cols=138 Identities=13% Similarity=0.033 Sum_probs=94.6
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ + ..-.+.+|+
T Consensus 12 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------~------~~~~~~~e~ 56 (279)
T 2w5a_A 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-----------------------------A------EKQMLVSEV 56 (279)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCH-----------------------------H------HHHHHHHHH
T ss_pred hhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCH-----------------------------H------HHHHHHHHH
Confidence 68999999999999975 79999999986542110 0 001245566
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-CCCCceEEEEeccCCCcCCchhhHhh---cCCCHHHHHHHHHHHH--HHHHHHcC-
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-DKSSTRVLTTEFIDGVKISDKEGLLE---KGFSLADVDRKLFTAF--AEQIFQTG- 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-~~~t~~VLVME~i~G~~l~d~~~l~~---~~~~~~~v~~~l~~~~--l~~i~~~G- 560 (1578)
+.+.++. +..-+.+-..+. +-...-+|||||++|.+|.++..... ..++...+...+.++. +..+|..|
T Consensus 57 ~~l~~l~----h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ 132 (279)
T 2w5a_A 57 NLLRELK----HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132 (279)
T ss_dssp HHHHHCC----CTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHhcC----CCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccC
Confidence 6666553 222233222222 12234579999999999988754221 2377777777666665 78899999
Q ss_pred ----ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 561 ----FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 561 ----~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
++|+|++|.||++. .++++|||...
T Consensus 133 ~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp -----CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999965 59999999764
No 393
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=98.84 E-value=7.3e-09 Score=119.61 Aligned_cols=136 Identities=17% Similarity=0.070 Sum_probs=91.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+........ .+ .-.+.+|+
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~--~~---------------------------------~~~~~~e~ 76 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK--SE---------------------------------RQRFKEEA 76 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH--HH---------------------------------HHHHHHHH
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCH--HH---------------------------------HHHHHHHH
Confidence 46999999999999864 78999999986432110 00 01234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcC--
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTG-- 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G-- 560 (1578)
+.+.++ .+...+.+-.++... ...-+|||||++|.+|.++.. ....++...+...+.+++ +..+|..|
T Consensus 77 ~~l~~l----~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~ 151 (290)
T 1t4h_A 77 EMLKGL----QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK-RFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp HHHTTC----CCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHH-HHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHhC----CCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHH-HccCCCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 555444 222223332332221 122479999999999988753 234567766666665555 78899999
Q ss_pred ccccCCCCCCCCCC----eeEEecCCch
Q psy12972 561 FVHADPHSGNDVNT----WLYPVDLGDK 584 (1578)
Q Consensus 561 ~vH~DpHPGNilv~----~v~liDfG~~ 584 (1578)
++|+|++|.|||+. .++++|||..
T Consensus 152 i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999974 5999999976
No 394
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.84 E-value=8e-09 Score=120.75 Aligned_cols=137 Identities=14% Similarity=0.115 Sum_probs=94.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..+|+.||||+........- ..-.+.+|++
T Consensus 34 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 78 (313)
T 3cek_A 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQ-----------------------------------TLDSYRNEIA 78 (313)
T ss_dssp EEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHH-----------------------------------HHHHHHHHHH
T ss_pred EEecCCCCEEEEEEEcCCCcEEEEEEecccccccc-----------------------------------chHHHHHHHH
Confidence 68999999999999998999999999865321100 0013466777
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccC
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHAD 565 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~D 565 (1578)
.+.++... .+. +.+-... .....-+|||| ..|.+|.++.. ....++...+...+.+++ +..+|..|++|+|
T Consensus 79 ~l~~l~~~---~~~iv~~~~~~-~~~~~~~lv~e-~~~~~L~~~l~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~d 152 (313)
T 3cek_A 79 YLNKLQQH---SDKIIRLYDYE-ITDQYIYMVME-CGNIDLNSWLK-KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSD 152 (313)
T ss_dssp HHHHHGGG---CTTBCCEEEEE-ECSSEEEEEEC-CCSEEHHHHHH-HCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHhcccc---CCceEEEEEEe-ecCCEEEEEEe-cCCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceecC
Confidence 77777642 222 2222222 22344689999 55778877643 234567666666555555 7889999999999
Q ss_pred CCCCCCCCC--eeEEecCCchhh
Q psy12972 566 PHSGNDVNT--WLYPVDLGDKFR 586 (1578)
Q Consensus 566 pHPGNilv~--~v~liDfG~~~~ 586 (1578)
++|.|||+. .++++|||....
T Consensus 153 lkp~NIl~~~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 153 LKPANFLIVDGMLKLIDFGIANQ 175 (313)
T ss_dssp CCGGGEEEETTEEEECCCSSSCC
T ss_pred CCcccEEEECCeEEEeecccccc
Confidence 999999964 589999997643
No 395
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.84 E-value=8.7e-10 Score=117.44 Aligned_cols=89 Identities=19% Similarity=0.363 Sum_probs=74.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-hHhHcCc--cccCCcEEEE-cCCccccccCC
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-LARRLGV--GSQLPQIALL-TDGRTSFFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-L~~k~gV--~~~~PTl~lf-~~G~~~~y~~G 947 (1578)
.+++++|.|||+||++|+.+.|.++++++.... ++.|+.||++.+.+ ++..|++ .+ +||+++| ++|+.+....|
T Consensus 45 ~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~~~~~~~~~~~~~~~~-~Pt~~~~d~~G~~~~~~~G 122 (164)
T 1sen_A 45 SGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLEDEEEPKDEDFSPDGGY-IPRILFLDPSGKVHPEIIN 122 (164)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEGGGSCSCGGGCTTCSC-SSEEEEECTTSCBCTTCCC
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecCCchHHHHHhcccCCc-CCeEEEECCCCCEEEEEeC
Confidence 478999999999999999999999998766543 37788899988877 8999988 65 9999999 88987765556
Q ss_pred C----------CCHHHHHHHHHhhC
Q psy12972 948 S----------FSVQKMVEFFRLKL 962 (1578)
Q Consensus 948 ~----------~s~~~L~~fi~~~l 962 (1578)
. .+.++|.+++++.+
T Consensus 123 ~~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 123 ENGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TTSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCCccchhcccCCHHHHHHHHHHHH
Confidence 3 78889999998765
No 396
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.83 E-value=2.8e-09 Score=124.45 Aligned_cols=144 Identities=14% Similarity=0.071 Sum_probs=96.3
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+..-.... ..+.....+.+|.
T Consensus 37 ~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~~~~~~~~~~~e~ 85 (312)
T 2iwi_A 37 PLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW-------------------------------SPLSDSVTCPLEV 85 (312)
T ss_dssp EEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC---------------------------------------CCCCHHH
T ss_pred eEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc-------------------------------ccchhhHHHHHHH
Confidence 6899999999999986 4799999999865422110 0011223346677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEec-cCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEF-IDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~-i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~ 564 (1578)
+.+.++.....+...+.+-.++. .....++|||| ++|.+|.++.. ....++...+...+.+++ +..+|..|++|+
T Consensus 86 ~~l~~l~~~~~h~~i~~~~~~~~-~~~~~~~v~e~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~ 163 (312)
T 2iwi_A 86 ALLWKVGAGGGHPGVIRLLDWFE-TQEGFMLVLERPLPAQDLFDYIT-EKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHR 163 (312)
T ss_dssp HHHHHHHSSCCCSSBCCEEEEC------CEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHHHHHHHHHTEECC
T ss_pred HHHHhhcccCCCCCeeeEEEEEe-cCCeEEEEEEecCCCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 77777754333333233333321 23456899999 79999988743 234577777766666655 788999999999
Q ss_pred CCCCCCCCCC----eeEEecCCchh
Q psy12972 565 DPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 565 DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|.||+++ .++++|||...
T Consensus 164 dlkp~Nil~~~~~~~~kl~dfg~~~ 188 (312)
T 2iwi_A 164 DIKDENILIDLRRGCAKLIDFGSGA 188 (312)
T ss_dssp CCSGGGEEEETTTTEEEECCCSSCE
T ss_pred CCChhhEEEeCCCCeEEEEEcchhh
Confidence 9999999974 48999999753
No 397
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.83 E-value=2.3e-09 Score=127.47 Aligned_cols=146 Identities=18% Similarity=0.229 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||+|++|.||+|+.. +++.||||+....-.. ...++..++.+. .-++.
T Consensus 43 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~e~~~~~~~~-------------------------~~~~~ 96 (345)
T 2v62_A 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGP-LFSELKFYQRVA-------------------------KKDCI 96 (345)
T ss_dssp EEC------CEEEEEESSSCGGGCCEEEEEEECC-CH-HHHHHHHHHHHC-------------------------CHHHH
T ss_pred eeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcc-hHHHHHHHHHHh-------------------------hhHHH
Confidence 68999999999999975 6899999998765321 122222211110 01233
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeC-C--CCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWD-K--SSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~-~--~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.|...+..+ .+...+.+-..+.. . ....+|||||+ |.+|.++..- ...++...+...+.+++ +..+|..
T Consensus 97 ~e~~~~~~l----~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~ 170 (345)
T 2v62_A 97 KKWIERKQL----DYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ-NGTFKKSTVLQLGIRMLDVLEYIHEN 170 (345)
T ss_dssp HHHHHHHTC----SCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG-GGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhhccc----cccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444443332 22222222222211 1 23458999999 9999887442 22677777777776666 7889999
Q ss_pred CccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 560 GFVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 560 G~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
|++|+|++|.|||+. .++++|||....
T Consensus 171 ~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~ 202 (345)
T 2v62_A 171 EYVHGDIKAANLLLGYKNPDQVYLADYGLSYR 202 (345)
T ss_dssp TEECSCCSGGGEEEESSSTTSEEECCCTTCEE
T ss_pred CeeCCCcCHHHEEEccCCCCcEEEEeCCCcee
Confidence 999999999999963 699999997643
No 398
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.83 E-value=6e-09 Score=125.83 Aligned_cols=138 Identities=20% Similarity=0.093 Sum_probs=88.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|+||+|+.. +|+.||||+.+..-.. . -.+..|+
T Consensus 60 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------------------------------~------~~~~~e~ 101 (382)
T 2vx3_A 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAF--------------------------------L------NQAQIEV 101 (382)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEECSSHHH--------------------------------H------HHHHHHH
T ss_pred EEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHH--------------------------------H------HHHHHHH
Confidence 68999999999999965 7899999998642110 0 0123455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhh-cCCCHHHHHHHHHHHH--HHHHH--HcC
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLE-KGFSLADVDRKLFTAF--AEQIF--QTG 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~-~~~~~~~v~~~l~~~~--l~~i~--~~G 560 (1578)
+.++.+... .......+..++.. .....+|||||++| .|.++..-.. .+++...+...+.+++ +..+| ..|
T Consensus 102 ~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ 179 (382)
T 2vx3_A 102 RLLELMNKH-DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS 179 (382)
T ss_dssp HHHHHHHHC-SSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC
T ss_pred HHHHHHHhc-ccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC
Confidence 555555421 11111123333221 23456799999987 7776543222 3577766666555555 56666 579
Q ss_pred ccccCCCCCCCCCC-----eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT-----WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~-----~v~liDfG~~~~ 586 (1578)
++|+|+||.|||+. .++++|||....
T Consensus 180 ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 99999999999973 389999997643
No 399
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.83 E-value=8.5e-09 Score=108.51 Aligned_cols=91 Identities=15% Similarity=0.318 Sum_probs=81.6
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHc---------------------------
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRL--------------------------- 924 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~--------------------------- 924 (1578)
..++++|.||++||++|+...|.+.++++.+.+.++.++.|+++.+.+.+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 35799999999999999999999999999999878999999999887777777
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|.+ +|+++++ ++|+....+.|..+.+++.+++++.+.
T Consensus 113 ~i~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 113 GITG-IPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp CSCS-SSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred CCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 8997 9999888 789888777798999999999988764
No 400
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.82 E-value=7.5e-09 Score=107.58 Aligned_cols=91 Identities=18% Similarity=0.388 Sum_probs=80.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc----------------------chhhHhHcCccccC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN----------------------EQGLARRLGVGSQL 930 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~----------------------~~~L~~k~gV~~~~ 930 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +..+++.|+|.+ +
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~ 104 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP-L 104 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS-S
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC-C
Confidence 67899999999999999999999999999987669999999865 357999999997 9
Q ss_pred CcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 931 PQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 931 PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
|+++++ ++|+....+.|..+.++|.+++.+.+..
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 999988 7898877667888999999999988754
No 401
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=98.82 E-value=1.8e-09 Score=124.99 Aligned_cols=136 Identities=18% Similarity=0.163 Sum_probs=82.3
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||+|++|.||+|+.. +|+.||||+........ . .-++.+|+
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~---------------------------------~~~~~~e~ 64 (303)
T 2vwi_A 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT---S---------------------------------MDELLKEI 64 (303)
T ss_dssp EECC---CCCEEEEEC----CEEEEECCC---------------------------------------------------
T ss_pred heeccccceEEEEEEECCCCcEEEEEEEEhhhcch---h---------------------------------HHHHHHHH
Confidence 68999999999999864 79999999875431110 0 00123344
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHh-------hcCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLL-------EKGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~-------~~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++ .+...+.+-.++ ......++||||++|.+|.++.... ...++...+...+.+++ +..+|.
T Consensus 65 ~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 139 (303)
T 2vwi_A 65 QAMSQC----HHPNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139 (303)
T ss_dssp -CCCCC----CCTTBCCEEEEE-ESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhc----CCCCEeeEEEEE-eecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 333332 222222322332 2234578999999999998875421 23367666666666655 788999
Q ss_pred cCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
.|++|+|++|.||++. .++++|||...
T Consensus 140 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 140 NGQIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred CCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 9999999999999964 58999999764
No 402
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.82 E-value=6.6e-09 Score=106.89 Aligned_cols=90 Identities=18% Similarity=0.333 Sum_probs=79.2
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------------------------ccchhhHhHc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRL 924 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------~~~~~L~~k~ 924 (1578)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|++ +.+..+++.|
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 106 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAF 106 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHT
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHh
Confidence 3689999999999999999999999999999876 99999995 4456899999
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+|.+ +|+++++ ++|+....+.|..+.++|.+++.+.+.
T Consensus 107 ~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 107 ENEY-VPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp CCCC-SSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred CCCC-CCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 9998 9999999 789887766788889999999987654
No 403
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.81 E-value=4e-09 Score=127.43 Aligned_cols=70 Identities=14% Similarity=0.208 Sum_probs=52.0
Q ss_pred eEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 516 RVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
-+|||||++| .|.+... . ....++...+...+.+++ +..+|..|++|+|+||.|||+. .++++|||....
T Consensus 113 ~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 191 (383)
T 3eb0_A 113 LNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKK 191 (383)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcc
Confidence 4699999987 5554422 1 224566666666665655 7889999999999999999973 499999997643
No 404
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=98.81 E-value=4.8e-09 Score=123.59 Aligned_cols=136 Identities=18% Similarity=0.135 Sum_probs=91.5
Q ss_pred cccccccceEEEEEEec-CCCEE--EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV--AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLN 485 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V--AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~ 485 (1578)
+.||.|++|.||+|+.. +|+.| |||+........ ..-.+.+
T Consensus 31 ~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~------------------------------------~~~~~~~ 74 (327)
T 1fvr_A 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD------------------------------------DHRDFAG 74 (327)
T ss_dssp EEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------------------------------------------CHHHH
T ss_pred eeeecCCCceEEEEEEccCCcccceeeeeeccccchH------------------------------------HHHHHHH
Confidence 68999999999999965 67755 888876432110 0012345
Q ss_pred HHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhh---------------cCCCHHHHHHHHH
Q psy12972 486 EGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLE---------------KGFSLADVDRKLF 549 (1578)
Q Consensus 486 Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~---------------~~~~~~~v~~~l~ 549 (1578)
|++.+.++. +++. +.+-.++ .....-+|||||++|.+|.++..-.. ..++...+...+.
T Consensus 75 E~~~l~~l~----~hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 149 (327)
T 1fvr_A 75 ELEVLCKLG----HHPNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149 (327)
T ss_dssp HHHHHTTCC----CCTTBCCEEEEE-EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHH
T ss_pred HHHHHHhcc----CCCchhhhceee-eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHH
Confidence 555554441 2332 2222232 22345689999999999988743211 2467777777666
Q ss_pred HHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 550 TAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 550 ~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
+++ +..+|..|++|+|++|.|||+. .++++|||...
T Consensus 150 qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~ 190 (327)
T 1fvr_A 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190 (327)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred HHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCc
Confidence 665 7889999999999999999975 58999999763
No 405
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.81 E-value=1.5e-08 Score=105.09 Aligned_cols=91 Identities=20% Similarity=0.304 Sum_probs=80.8
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch-----------------------hhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ-----------------------GLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~-----------------------~L~~k~gV~~~ 929 (1578)
+++++|.||++||++|+...|.++++++.+.+.++.+..|+++.+. ++++.|+|.+
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 108 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING- 108 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS-
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC-
Confidence 6789999999999999999999999999998777999999998764 7899999997
Q ss_pred CCcEEEEc-CCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 930 LPQIALLT-DGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 930 ~PTl~lf~-~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
+|+++++. +|+....+.|..+.++|.+++.+....
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcc
Confidence 99999995 888877777888889999999877643
No 406
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.81 E-value=7.1e-09 Score=124.02 Aligned_cols=138 Identities=16% Similarity=0.125 Sum_probs=89.9
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+. .+|+.||||+.+.+.... . .+.+|+
T Consensus 25 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------------------------------~------~~~~e~ 66 (373)
T 1q8y_A 25 RKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT--------------------------------E------AAEDEI 66 (373)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHH--------------------------------H------HHHHHH
T ss_pred EeeeecCCeEEEEEEecCCCcEEEEEEecCCccch--------------------------------h------hhhHHH
Confidence 6799999999999996 589999999987432100 0 123344
Q ss_pred HHHHHHHHhh-------CCCCCeeecEEeeCC---CCceEEEEeccCCCcCCchhhH-hhcCCCHHHHHHHHHHHH--HH
Q psy12972 488 RNAERCSKDL-------AHLPYVYIPRILWDK---SSTRVLTTEFIDGVKISDKEGL-LEKGFSLADVDRKLFTAF--AE 554 (1578)
Q Consensus 488 ~n~~r~~~~~-------~~~~~v~vP~v~~~~---~t~~VLVME~i~G~~l~d~~~l-~~~~~~~~~v~~~l~~~~--l~ 554 (1578)
+.++++.+.- .+...+.+-..+... ...-+|||||+ |.+|.++..- ...+++...+...+.+++ +.
T Consensus 67 ~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 145 (373)
T 1q8y_A 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145 (373)
T ss_dssp HHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHH
Confidence 4444443210 011112222222111 11457999999 8888876432 234577777777666665 78
Q ss_pred HHHHc-CccccCCCCCCCCCC---------eeEEecCCchh
Q psy12972 555 QIFQT-GFVHADPHSGNDVNT---------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~-G~vH~DpHPGNilv~---------~v~liDfG~~~ 585 (1578)
.+|.. |++|+|++|.|||+. .++++|||...
T Consensus 146 ~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~ 186 (373)
T 1q8y_A 146 YMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC 186 (373)
T ss_dssp HHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCE
T ss_pred HHHhcCCEEecCCChHHeEEeccCCCcCcceEEEccccccc
Confidence 89998 999999999999973 58999999763
No 407
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.81 E-value=7.7e-09 Score=107.69 Aligned_cols=90 Identities=13% Similarity=0.285 Sum_probs=78.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc------------------------chhhHhHcC--c
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN------------------------EQGLARRLG--V 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~------------------------~~~L~~k~g--V 926 (1578)
.++++|.||++||++|+...|.+.++++.+++.++.+..|+++. ...+++.|+ +
T Consensus 24 gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 103 (151)
T 3raz_A 24 APVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTV 103 (151)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCS
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCcc
Confidence 67999999999999999999999999999987779999999863 345788899 9
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++++...
T Consensus 104 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 104 GV-LPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CC-SSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred CC-CCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 87 9998888 789888777899999999999987653
No 408
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=98.81 E-value=6.4e-09 Score=120.03 Aligned_cols=135 Identities=13% Similarity=-0.008 Sum_probs=89.6
Q ss_pred cccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
..||.|++|+||+|+. .+|+.||||+....-... . -.+.+|+
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------------------------------~------~~~~~e~ 70 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY-------------------------------S------QPLHEEI 70 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----------------------------------------HHHHHHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHH-------------------------------H------HHHHHHH
Confidence 4799999999999995 479999999876431100 0 1234455
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhc--CCCHHHHHHHHHHHH--HHHHHHcCccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEK--GFSLADVDRKLFTAF--AEQIFQTGFVH 563 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~--~~~~~~v~~~l~~~~--l~~i~~~G~vH 563 (1578)
+.+.++ .+..-+.+-..+. .....+|||||++|.+|.++...... ..+...+...+.+++ +..+|..|++|
T Consensus 71 ~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 145 (295)
T 2clq_A 71 ALHKHL----KHKNIVQYLGSFS-ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145 (295)
T ss_dssp HHHHTC----CCTTBCCEEEEEE-ETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHhC----CCCCEeeEeeEEE-eCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEc
Confidence 555443 2322233333332 23456899999999999887542211 234455544444444 78899999999
Q ss_pred cCCCCCCCCCC----eeEEecCCchh
Q psy12972 564 ADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 564 ~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
+|++|.||++. .++++|||...
T Consensus 146 ~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 146 RDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp CCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred cCCChhhEEEECCCCCEEEeeccccc
Confidence 99999999963 58999999764
No 409
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.80 E-value=4.6e-09 Score=124.69 Aligned_cols=148 Identities=14% Similarity=0.078 Sum_probs=94.2
Q ss_pred hhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHH
Q psy12972 401 QLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQ 479 (1578)
Q Consensus 401 ~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ 479 (1578)
+-|... +.||.|++|.||+|+. .+|+.||||+.+......- .+... -.
T Consensus 24 ~~y~~~--~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~--------------~~~~~-~~-------------- 72 (335)
T 3dls_A 24 QKYSTM--SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLED--------------CWIED-PK-------------- 72 (335)
T ss_dssp HHEEEE--EECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTT--------------SEEEE-TT--------------
T ss_pred cceEEE--eEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccc--------------cccch-HH--------------
Confidence 334444 6899999999999995 4899999999876421100 00000 00
Q ss_pred HHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHH--HHHH
Q psy12972 480 ELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 480 ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
.-.+.+|++.+.++. +...+.+-.++ ......+|||||+.+ ..+.++.. ....++...+...+.+++ +..+
T Consensus 73 ~~~~~~E~~~l~~l~----h~~Iv~~~~~~-~~~~~~~lv~e~~~~g~~l~~~~~-~~~~l~~~~~~~i~~qi~~~L~~L 146 (335)
T 3dls_A 73 LGKVTLEIAILSRVE----HANIIKVLDIF-ENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFRQLVSAVGYL 146 (335)
T ss_dssp TEEEEHHHHHHTTCC----CTTBCCEEEEE-ECSSEEEEEEECCTTSCBHHHHHH-TCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC----CCCEeeEEEEE-eeCCEEEEEEEeCCCCccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 002244555554442 22223332333 233456799999854 47766532 223577777666666655 7889
Q ss_pred HHcCccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 557 FQTGFVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 557 ~~~G~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|..|++|+|++|.|||+. .++++|||...
T Consensus 147 H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 147 RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred HhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 999999999999999965 59999999763
No 410
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.78 E-value=1.7e-08 Score=118.52 Aligned_cols=136 Identities=18% Similarity=0.175 Sum_probs=90.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+..+.-... .-.+.+|+
T Consensus 34 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~e~ 76 (337)
T 3ll6_A 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEK-------------------------------------NRAIIQEV 76 (337)
T ss_dssp EEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHH-------------------------------------HHHHHHHH
T ss_pred EEEccCCceEEEEEEECCCCcEEEEEEecCCchHH-------------------------------------HHHHHHHH
Confidence 68999999999999964 89999999875442110 01234566
Q ss_pred HHHHHHHHhhCCCCCeeecEEee-------CCCCceEEEEeccCCCcCCchhh-Hh-hcCCCHHHHHHHHHHHH--HHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILW-------DKSSTRVLTTEFIDGVKISDKEG-LL-EKGFSLADVDRKLFTAF--AEQI 556 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~-------~~~t~~VLVME~i~G~~l~d~~~-l~-~~~~~~~~v~~~l~~~~--l~~i 556 (1578)
+.+.++.. +...+.+-..+. .....-+++|||++| +|.+... .. ...++...+...+.+++ +..+
T Consensus 77 ~~l~~l~~---h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L 152 (337)
T 3ll6_A 77 CFMKKLSG---HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152 (337)
T ss_dssp HHHHHHTT---STTBCCEEEEEEECTTTSTTSSEEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc---CCChhhccccccccccccccCCceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 66666541 222233322221 112234799999986 5555432 12 23477777777666666 8889
Q ss_pred HHcC--ccccCCCCCCCCCC---eeEEecCCchh
Q psy12972 557 FQTG--FVHADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 557 ~~~G--~vH~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|..| ++|+|++|.|||+. .++++|||...
T Consensus 153 H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred HhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9999 99999999999965 58999999753
No 411
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.77 E-value=8.9e-09 Score=126.73 Aligned_cols=128 Identities=20% Similarity=0.150 Sum_probs=81.8
Q ss_pred CcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 408 ENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 408 ~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
.+.||.|++|.||.+...+|+.||||+..+...+. +.+|+
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~----------------------------------------~~~E~ 59 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDI----------------------------------------ALMEI 59 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHH----------------------------------------HHHHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHH----------------------------------------HHHHH
Confidence 47899999999987777799999999886532111 13444
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC--CCCceEEEEeccCCCcCCchhhHhhcCCCH-----------HHHHHHHHHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD--KSSTRVLTTEFIDGVKISDKEGLLEKGFSL-----------ADVDRKLFTAFAE 554 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~--~~t~~VLVME~i~G~~l~d~~~l~~~~~~~-----------~~v~~~l~~~~l~ 554 (1578)
+.+.++. +++.| .+++.. ....-+|||||++| +|.++.. ..+... ..++..++.+ +.
T Consensus 60 ~~l~~l~----~HpnI--v~~~~~~~~~~~~~lv~E~~~g-sL~~~l~--~~~~~~~~~~~~~~~~~~~i~~qi~~a-L~ 129 (434)
T 2rio_A 60 KLLTESD----DHPNV--IRYYCSETTDRFLYIALELCNL-NLQDLVE--SKNVSDENLKLQKEYNPISLLRQIASG-VA 129 (434)
T ss_dssp HHHHHHT----TSTTB--CCEEEEEECSSEEEEEECCCSE-EHHHHHH--TC------------CCHHHHHHHHHHH-HH
T ss_pred HHHHhcc----CCCCc--CeEEEEEecCCeEEEEEecCCC-CHHHHHh--ccCCCchhhhhccchhHHHHHHHHHHH-HH
Confidence 4444432 23332 222322 22345799999976 7877643 222111 1233333332 77
Q ss_pred HHHHcCccccCCCCCCCCCC----------------eeEEecCCchh
Q psy12972 555 QIFQTGFVHADPHSGNDVNT----------------WLYPVDLGDKF 585 (1578)
Q Consensus 555 ~i~~~G~vH~DpHPGNilv~----------------~v~liDfG~~~ 585 (1578)
.+|..|++|+|++|.|||+. .++++|||...
T Consensus 130 ~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~ 176 (434)
T 2rio_A 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176 (434)
T ss_dssp HHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCE
T ss_pred HHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccce
Confidence 89999999999999999973 47888888653
No 412
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.77 E-value=7.6e-09 Score=122.23 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=91.0
Q ss_pred cccccccceEEEEEEec-CCCEE----EEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEV----AVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDF 483 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~V----AVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf 483 (1578)
+.||.|++|.||+|+.. +|+.| |+|..+...... . .-.+
T Consensus 21 ~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~----------------------~--------------~~~~ 64 (327)
T 3lzb_A 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK----------------------A--------------NKEI 64 (327)
T ss_dssp EEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCC----------------------C--------------HHHH
T ss_pred EEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHH----------------------H--------------HHHH
Confidence 68999999999999954 67665 555554322110 0 0123
Q ss_pred HHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCc
Q psy12972 484 LNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGF 561 (1578)
Q Consensus 484 ~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~ 561 (1578)
.+|++.+.++. +...+.+-.++. .....++|||++|.++.+...-....++...+...+.+++ +..+|..|+
T Consensus 65 ~~E~~~l~~l~----hp~iv~~~~~~~--~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 138 (327)
T 3lzb_A 65 LDEAYVMASVD----NPHVCRLLGICL--TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 138 (327)
T ss_dssp HHHHHHHTTCC----BTTBCCCCEEEE--SSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCC----CCCeeEEEEEEe--cCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 45555554442 222233333332 3456799999999999887544445677777777666666 888999999
Q ss_pred cccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 562 VHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 562 vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
+|+|+||.|||+. .++++|||....
T Consensus 139 vH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 139 VHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp CCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred cCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 9999999999974 699999998744
No 413
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.77 E-value=1.8e-08 Score=130.44 Aligned_cols=135 Identities=15% Similarity=0.101 Sum_probs=95.0
Q ss_pred cccccccceEEEEEEec----CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHH
Q psy12972 409 NPIAAASLAQVFRAVTK----EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFL 484 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~----~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~ 484 (1578)
+.||.|++|.||+|+.. .+..||||+.+....... .-.|.
T Consensus 396 ~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~------------------------------------~~~~~ 439 (656)
T 2j0j_A 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV------------------------------------REKFL 439 (656)
T ss_dssp EEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHH------------------------------------HHHHH
T ss_pred eEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHH------------------------------------HHHHH
Confidence 57999999999999875 356799998764322110 11345
Q ss_pred HHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCcc
Q psy12972 485 NEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFV 562 (1578)
Q Consensus 485 ~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~v 562 (1578)
+|+..+.++. +..-+.+-.++. .+..+|||||++|.+|.++.......++...+...+.+++ +..+|..|++
T Consensus 440 ~E~~~l~~l~----HpnIv~l~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~giv 513 (656)
T 2j0j_A 440 QEALTMRQFD----HPHIVKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV 513 (656)
T ss_dssp HHHHHHHHCC----CTTBCCEEEEEC--SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhCC----CCCCCeEEEEEe--cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 6666666552 333233333332 2456899999999999887543334577776666655555 7889999999
Q ss_pred ccCCCCCCCCCC---eeEEecCCchh
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGDKF 585 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~~~ 585 (1578)
|+|++|.|||+. .++++|||...
T Consensus 514 HrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 514 HRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred ccccchHhEEEeCCCCEEEEecCCCe
Confidence 999999999964 59999999764
No 414
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.76 E-value=8.2e-09 Score=116.73 Aligned_cols=88 Identities=15% Similarity=0.056 Sum_probs=63.5
Q ss_pred CChhhhccccCCcccc-cccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHH
Q psy12972 397 CTHSQLFRSFDENPIA-AASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKV 475 (1578)
Q Consensus 397 ~~~~~iF~~fd~~Pla-saSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~ 475 (1578)
..+.+.+...+-+|++ .|+.++||+....+|+.++||+.++...
T Consensus 13 ~~l~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~----------------------------------- 57 (264)
T 1nd4_A 13 AAWVERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGAL----------------------------------- 57 (264)
T ss_dssp GGGTTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTT-----------------------------------
T ss_pred HHHHHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccc-----------------------------------
Confidence 3345555666667887 6677999999888899999999765310
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCC--CceEEEEeccCCCcCC
Q psy12972 476 PLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKS--STRVLTTEFIDGVKIS 529 (1578)
Q Consensus 476 ~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~--t~~VLVME~i~G~~l~ 529 (1578)
-++..|++.++.++.. .+.||+++.... +..+++|||++|.++.
T Consensus 58 -----~~~~~E~~~l~~l~~~-----~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 58 -----NELQDEAARLSWLATT-----GVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp -----SCHHHHHHHHHHHHTT-----TCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred -----hhhhHHHHHHHHHHhC-----CCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 1246788888877642 467898875332 3459999999999985
No 415
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.75 E-value=1.4e-08 Score=104.49 Aligned_cols=88 Identities=9% Similarity=0.186 Sum_probs=76.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-------------------------hHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-------------------------LARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-------------------------L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++.+.+.+.++.+..|+++.+.+ +++.|+|.
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~ 110 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIY 110 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcC
Confidence 57999999999999999999999999999987779999999987766 99999999
Q ss_pred ccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 928 SQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 928 ~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
+ +|+++++ ++|+....+.|..+.+++++.+.+.
T Consensus 111 ~-~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 111 A-TPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp S-SCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred C-CCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 7 9999999 7898877666776666666666543
No 416
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.75 E-value=2.6e-08 Score=116.22 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=80.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.+ +|+.||||+.++.....- +..+..|.
T Consensus 31 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------------------------------------~~~~~~~~ 74 (318)
T 2dyl_A 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEE------------------------------------NKRILMDL 74 (318)
T ss_dssp EEC------CEEEEEETTTCCEEEEEEEETTSCHHH------------------------------------HHHHHHHH
T ss_pred ceeeecCCeeEEEEEEecCCeEEEEEEecccccchH------------------------------------HHHHHHHH
Confidence 68999999999999975 899999999875422110 00001111
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHH-cCcccc
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQ-TGFVHA 564 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~-~G~vH~ 564 (1578)
. .+.....+..-+.+-.++. .....+|||||+ |..+..+.......++...+...+.+++ +..+|. +|++|+
T Consensus 75 ~---~~~~~~~h~~i~~~~~~~~-~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 149 (318)
T 2dyl_A 75 D---VVLKSHDCPYIVQCFGTFI-TNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149 (318)
T ss_dssp H---HHHHTTTCTTBCCEEEEEE-CSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred H---HHHHhcCCCceeeEEEEEe-cCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence 1 1112222222233333332 234568999999 5555444333345677777666666655 778898 599999
Q ss_pred CCCCCCCCCC---eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
|++|.||++. .++++|||....
T Consensus 150 dlkp~Nil~~~~~~~kl~dfg~~~~ 174 (318)
T 2dyl_A 150 DVKPSNILLDERGQIKLCDFGISGR 174 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC--
T ss_pred CCCHHHEEECCCCCEEEEECCCchh
Confidence 9999999974 599999997643
No 417
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.74 E-value=4.8e-09 Score=110.43 Aligned_cols=91 Identities=23% Similarity=0.370 Sum_probs=76.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEE----------------------------ECccchhhHhH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTV----------------------------HVHNEQGLARR 923 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~V----------------------------Dc~~~~~L~~k 923 (1578)
..++++|.||++||++|+...|.++++++.++..++.+..| +++.+.+++++
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 36799999999999999999999999999875545555444 44456789999
Q ss_pred cCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
|+|.+ +||++++ ++|+....+.|..+.++|.+++++.+.
T Consensus 117 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 117 LNISV-YPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTCCS-SSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred cCCCc-cceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 99998 9999999 789887777788999999999988764
No 418
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.74 E-value=6e-09 Score=128.25 Aligned_cols=131 Identities=10% Similarity=0.004 Sum_probs=81.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|+|+.+...+|+.||||+..+...... .+|.+
T Consensus 30 ~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~----------------------------------------~~E~~ 69 (432)
T 3p23_A 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFA----------------------------------------DREVQ 69 (432)
T ss_dssp EEEEECGGGCEEEEEESSSSEEEEEEECTTTEEEC----------------------------------------HHHHH
T ss_pred CeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHH----------------------------------------HHHHH
Confidence 68999999997666567999999999876432211 23333
Q ss_pred HHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCC---CHHHHHHHHHHHHHHHHHHcCcccc
Q psy12972 489 NAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGF---SLADVDRKLFTAFAEQIFQTGFVHA 564 (1578)
Q Consensus 489 n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~---~~~~v~~~l~~~~l~~i~~~G~vH~ 564 (1578)
.+.++ ..++. |.+=..+ .....-+|||||++| +|.+...-..... ....++..++.+ +..+|..|++|+
T Consensus 70 ~l~~l----~~HpnIv~l~~~~-~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~a-L~~LH~~~ivHr 142 (432)
T 3p23_A 70 LLRES----DEHPNVIRYFCTE-KDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSG-LAHLHSLNIVHR 142 (432)
T ss_dssp HHHHS----CCCTTBCCEEEEE-EETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHH-HHHHHHTTCCCC
T ss_pred HHHhc----cCCCCcCeEEEEE-ecCCEEEEEEECCCC-CHHHHHHhcCCCccchhHHHHHHHHHHH-HHHHHHCcCEeC
Confidence 33332 12333 2221222 122345799999987 6666532221122 223344444432 788999999999
Q ss_pred CCCCCCCCCC--------eeEEecCCchhh
Q psy12972 565 DPHSGNDVNT--------WLYPVDLGDKFR 586 (1578)
Q Consensus 565 DpHPGNilv~--------~v~liDfG~~~~ 586 (1578)
|++|.|||+. .++++|||....
T Consensus 143 DlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 143 DLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CCCHHHEEEecCCCCCceeEEEecccceee
Confidence 9999999973 377999997643
No 419
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=98.74 E-value=9.8e-09 Score=116.71 Aligned_cols=135 Identities=8% Similarity=-0.040 Sum_probs=89.0
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+.. |+.||||+.+......- ..-.|.+|++
T Consensus 16 ~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~-----------------------------------~~~~~~~E~~ 59 (271)
T 3kmu_A 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTR-----------------------------------KSRDFNEECP 59 (271)
T ss_dssp EEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHH-----------------------------------HHHHHHHHGG
T ss_pred HHhcCCCcceEEEEEEC-CeeEEEEEecccccCHH-----------------------------------HHHHHHHHHH
Confidence 68999999999999974 99999999875421100 0012344554
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCC-CCceEEEEeccCCCcCCchhhHhhc-CCCHHHHHHHHHHHH--HHHHHHcC--cc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDK-SSTRVLTTEFIDGVKISDKEGLLEK-GFSLADVDRKLFTAF--AEQIFQTG--FV 562 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~-~t~~VLVME~i~G~~l~d~~~l~~~-~~~~~~v~~~l~~~~--l~~i~~~G--~v 562 (1578)
.+.++ .+..-+.+-.++.+- ....+|||||++|.+|.++..-... .++...+...+.+++ +..+|..| ++
T Consensus 60 ~l~~l----~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~ 135 (271)
T 3kmu_A 60 RLRIF----SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIP 135 (271)
T ss_dssp GGCCC----SCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCT
T ss_pred HHHhc----CCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 44333 222223333333222 1345899999999999887432111 367777777766666 78899999 99
Q ss_pred ccCCCCCCCCCC---eeEEecCCc
Q psy12972 563 HADPHSGNDVNT---WLYPVDLGD 583 (1578)
Q Consensus 563 H~DpHPGNilv~---~v~liDfG~ 583 (1578)
|+|++|.||++. .+++.|||.
T Consensus 136 H~dikp~Nil~~~~~~~~l~~~~~ 159 (271)
T 3kmu_A 136 RHALNSRSVMIDEDMTARISMADV 159 (271)
T ss_dssp TCCCSGGGEEECTTSCEEEEGGGS
T ss_pred cCCCccceEEEcCCcceeEEeccc
Confidence 999999999965 356665554
No 420
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.74 E-value=4.1e-09 Score=124.02 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=97.9
Q ss_pred ChhhhccccCCcccccccceEEEEEEe-cCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHH
Q psy12972 398 THSQLFRSFDENPIAAASLAQVFRAVT-KEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVP 476 (1578)
Q Consensus 398 ~~~~iF~~fd~~PlasaSiaQVhrA~l-~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~ 476 (1578)
.+.+-|.-. +.||.|++|.||+|+. .+|+.||||+.++....... .+
T Consensus 40 ~~~~~y~~~--~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~--------------~~---------------- 87 (320)
T 3a99_A 40 PLESQYQVG--PLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--------------EL---------------- 87 (320)
T ss_dssp CCTTTEEEE--EECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEE--------------EC----------------
T ss_pred CccCceEEE--EEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhh--------------hh----------------
Confidence 344444444 6799999999999985 48999999998764321100 00
Q ss_pred HHHHHhHHHHHHHHHHHHHhhCCCCC-eeecEEeeCCCCceEEEEeccCC-CcCCchhhHhhcCCCHHHHHHHHHHHH--
Q psy12972 477 LEQELDFLNEGRNAERCSKDLAHLPY-VYIPRILWDKSSTRVLTTEFIDG-VKISDKEGLLEKGFSLADVDRKLFTAF-- 552 (1578)
Q Consensus 477 l~~ElDf~~Ea~n~~r~~~~~~~~~~-v~vP~v~~~~~t~~VLVME~i~G-~~l~d~~~l~~~~~~~~~v~~~l~~~~-- 552 (1578)
..+-.+.+|+..+.++.. ..+. +.+-..+ ......++|||+++| .+|.++.. ....++...+...+.+++
T Consensus 88 -~~~~~~~~E~~~l~~l~~---~~~~i~~~~~~~-~~~~~~~lv~e~~~~~~~L~~~l~-~~~~l~~~~~~~i~~qi~~~ 161 (320)
T 3a99_A 88 -PNGTRVPMEVVLLKKVSS---GFSGVIRLLDWF-ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEA 161 (320)
T ss_dssp -TTCCEEEHHHHHHHHHCS---SSCSBCCEEEEE-ECSSEEEEEEECCSSEEEHHHHHH-HHCSCCHHHHHHHHHHHHHH
T ss_pred -hhhhHHHHHHHHHHhhcc---CCCCceEEEEEE-ecCCcEEEEEEcCCCCccHHHHHh-ccCCCCHHHHHHHHHHHHHH
Confidence 001123456666666542 1222 2222222 223456899999986 77877643 234567766666665555
Q ss_pred HHHHHHcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 553 AEQIFQTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 553 l~~i~~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
+..+|..|++|+|++|.|||+. .++++|||...
T Consensus 162 L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 162 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp HHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred HHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 7889999999999999999964 58999999753
No 421
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.74 E-value=2e-08 Score=118.06 Aligned_cols=137 Identities=14% Similarity=0.096 Sum_probs=88.0
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.+........ ..+..|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~------------------------------------~~~~~e~ 71 (327)
T 3aln_A 28 GEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQ------------------------------------KQLLMDL 71 (327)
T ss_dssp CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHH------------------------------------HHHHHHH
T ss_pred heeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHH------------------------------------HHHHHHH
Confidence 67999999999999975 7999999998764321100 0111222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhH----hhcCCCHHHHHHHHHHHH--HHHHHHc-C
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGL----LEKGFSLADVDRKLFTAF--AEQIFQT-G 560 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l----~~~~~~~~~v~~~l~~~~--l~~i~~~-G 560 (1578)
.. +...+.+..-+.+-.++. .....+|||||++| .+.++... ....++...+...+.+++ +..+|.. |
T Consensus 72 ~~---~~~~~~h~niv~~~~~~~-~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ 146 (327)
T 3aln_A 72 DV---VMRSSDCPYIVQFYGALF-REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146 (327)
T ss_dssp HH---HHSSCCCTTBCCEEEEEE-CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HH---HHHcCCCCcEeeeeeEEE-eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 11 112222222233333332 23456799999998 55554321 134566666666555555 7788998 9
Q ss_pred ccccCCCCCCCCCC---eeEEecCCchhh
Q psy12972 561 FVHADPHSGNDVNT---WLYPVDLGDKFR 586 (1578)
Q Consensus 561 ~vH~DpHPGNilv~---~v~liDfG~~~~ 586 (1578)
++|+|++|.||+++ .++++|||....
T Consensus 147 ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 147 IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99999999999964 699999997643
No 422
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.73 E-value=2.1e-08 Score=103.17 Aligned_cols=86 Identities=16% Similarity=0.261 Sum_probs=74.7
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHh-CCCceEEEEEECcc-------------------------chhhHhHcCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDEL-SPLGVGFFTVHVHN-------------------------EQGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l-~~~~v~~a~VDc~~-------------------------~~~L~~k~gV 926 (1578)
+++++|.||++||++|+...|.+.++++.+ .+.++.+..|+++. +..+++.|+|
T Consensus 33 gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 112 (148)
T 3fkf_A 33 NRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAI 112 (148)
T ss_dssp TSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTC
T ss_pred CcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCC
Confidence 679999999999999999999999999999 77779999998876 4489999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
.+ +|+++++ ++|+...... +.+++.+++.+.+
T Consensus 113 ~~-~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 113 LT-LPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CS-SSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CC-cCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 97 9999999 7887665442 7788998888765
No 423
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.73 E-value=9.7e-09 Score=125.84 Aligned_cols=132 Identities=18% Similarity=0.186 Sum_probs=86.9
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+...+... +.+|+
T Consensus 60 ~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~E~ 98 (420)
T 1j1b_A 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-----------------------------------------KNREL 98 (420)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-----------------------------------------CCHHH
T ss_pred eEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-----------------------------------------HHHHH
Confidence 67999999999999975 6999999987543110 01244
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCC---CCc--eEEEEeccCCCcCCchhh-H--hhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDK---SST--RVLTTEFIDGVKISDKEG-L--LEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~---~t~--~VLVME~i~G~~l~d~~~-l--~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
+.+.++ .+...|.+-.++... ... -+|||||++|. +.+... . ....++...+...+.+++ +..+|
T Consensus 99 ~il~~l----~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 173 (420)
T 1j1b_A 99 QIMRKL----DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173 (420)
T ss_dssp HHHHTC----CCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc----CCCCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 444433 333334444443211 111 35899999873 333221 1 124566666666665655 78899
Q ss_pred HcCccccCCCCCCCCCC----eeEEecCCchhh
Q psy12972 558 QTGFVHADPHSGNDVNT----WLYPVDLGDKFR 586 (1578)
Q Consensus 558 ~~G~vH~DpHPGNilv~----~v~liDfG~~~~ 586 (1578)
..|++|+|+||.|||+. .++++|||....
T Consensus 174 ~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 174 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 99999999999999964 379999997643
No 424
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.72 E-value=5e-09 Score=134.43 Aligned_cols=137 Identities=17% Similarity=0.170 Sum_probs=93.7
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+.++..... ..-.+.+|+
T Consensus 20 ~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~------------------------------------~~~~~~~Ei 63 (676)
T 3qa8_A 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK------------------------------------NRERWCLEI 63 (676)
T ss_dssp CCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHH------------------------------------HHHHHHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHH------------------------------------HHHHHHHHH
Confidence 67999999999999964 79999999987643211 011345677
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeC---C--CCceEEEEeccCCCcCCchhhHhh--cCCCHHHHHHHHHHHH--HHHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWD---K--SSTRVLTTEFIDGVKISDKEGLLE--KGFSLADVDRKLFTAF--AEQIFQ 558 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~---~--~t~~VLVME~i~G~~l~d~~~l~~--~~~~~~~v~~~l~~~~--l~~i~~ 558 (1578)
+.+.++. +...+.+-.++.. . ....+|||||++|.+|.++..... .+++...+...+.+++ +..+|.
T Consensus 64 ~iL~~L~----HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs 139 (676)
T 3qa8_A 64 QIMKKLN----HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139 (676)
T ss_dssp HHHHHCC----BTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC----CCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6666653 2222333333222 1 344589999999999988743211 1456556655555555 788999
Q ss_pred cCccccCCCCCCCCCC------eeEEecCCchh
Q psy12972 559 TGFVHADPHSGNDVNT------WLYPVDLGDKF 585 (1578)
Q Consensus 559 ~G~vH~DpHPGNilv~------~v~liDfG~~~ 585 (1578)
.|++|+|++|+||++. .++++|||...
T Consensus 140 ~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp TTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred CCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 9999999999999964 27788888654
No 425
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.72 E-value=3.4e-09 Score=111.25 Aligned_cols=90 Identities=9% Similarity=0.079 Sum_probs=64.5
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-cchhhHhHcCccccCCcEEEEc-CCccccccCCC-
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-NEQGLARRLGVGSQLPQIALLT-DGRTSFFKEPS- 948 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-~~~~L~~k~gV~~~~PTl~lf~-~G~~~~y~~G~- 948 (1578)
.+++++|.|||+||++|+.+.|.+.+......-.+..|+.||++ +..+++.+++|.+ +||+++|. +|+.+....|.
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~-~PT~~f~~~~G~~v~~~~G~~ 121 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQY-VPRIMFVDPSLTVRADIAGRY 121 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCC-SSEEEEECTTSCBCTTCCCSC
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCC-CCEEEEECCCCCEEEEEeCCc
Confidence 47999999999999999999999986432211001345566664 3456788999998 99999997 89877666676
Q ss_pred ---------CCHHHHHHHHHhhC
Q psy12972 949 ---------FSVQKMVEFFRLKL 962 (1578)
Q Consensus 949 ---------~s~~~L~~fi~~~l 962 (1578)
.+.+.+++.+++.+
T Consensus 122 ~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 122 SNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCcccccchhhHHHHHHHHHHHH
Confidence 33455666665543
No 426
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.70 E-value=1.9e-08 Score=104.48 Aligned_cols=89 Identities=15% Similarity=0.202 Sum_probs=77.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE-----------------------CccchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD-----------------------c~~~~~L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+ ++.+..+++.|+|.+
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~- 106 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV- 106 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS-
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc-
Confidence 67899999999999999999999999999987678887665 345678999999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+....+.|..+.++|.+++++.+
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAW 140 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999998 78887766778899999999998766
No 427
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.69 E-value=4.2e-08 Score=101.78 Aligned_cols=92 Identities=16% Similarity=0.282 Sum_probs=77.9
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccch----------------------hhHhHcCcccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQ----------------------GLARRLGVGSQ 929 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~----------------------~L~~k~gV~~~ 929 (1578)
..++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+. .+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG- 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS-
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC-
Confidence 36799999999999999999999999999998877999999988655 6889999997
Q ss_pred CCcEEEE-cCCccccccCCCC--CHHHHHHHHHhhCCC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLPY 964 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~--s~~~L~~fi~~~lp~ 964 (1578)
+|+++++ ++|+....+.|.. +.++|.++|++.+..
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGG 143 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcc
Confidence 9998888 7888776555643 457999999887743
No 428
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.69 E-value=2.6e-08 Score=118.55 Aligned_cols=135 Identities=16% Similarity=0.082 Sum_probs=74.8
Q ss_pred cccccccceEEEEEEec-CCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTK-EGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEG 487 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~-~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea 487 (1578)
+.||.|++|.||+|+.. +|+.||||+...+-... . .+..|.
T Consensus 29 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~-------------------------------------~~~~~~ 70 (360)
T 3e3p_A 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR-N-------------------------------------RELQIM 70 (360)
T ss_dssp ----------CEEEEETTTCCEEEEEEEECCTTCC-C-------------------------------------HHHHHH
T ss_pred EEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc-H-------------------------------------HHHHHH
Confidence 68999999999999975 79999999875432110 0 011222
Q ss_pred HHHHHHHHhhCCCCCeeecEEeeCCCC------ceEEEEeccCCCcCCchhhH--hhcCCCHHHHHHHHHHHH--HHHHH
Q psy12972 488 RNAERCSKDLAHLPYVYIPRILWDKSS------TRVLTTEFIDGVKISDKEGL--LEKGFSLADVDRKLFTAF--AEQIF 557 (1578)
Q Consensus 488 ~n~~r~~~~~~~~~~v~vP~v~~~~~t------~~VLVME~i~G~~l~d~~~l--~~~~~~~~~v~~~l~~~~--l~~i~ 557 (1578)
+.+..+ .+...+.+-..+..... --+|||||++|.....+... ....++...+...+.+++ +..+|
T Consensus 71 ~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 71 QDLAVL----HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp HHHHHH----CCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhc----CCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 223332 23333444343322111 14699999998533332221 223455555555555544 67788
Q ss_pred --HcCccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 558 --QTGFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 558 --~~G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
..|++|+|++|.|||+. .++++|||...
T Consensus 147 ~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~ 180 (360)
T 3e3p_A 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180 (360)
T ss_dssp STTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred CCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence 99999999999999963 58999999764
No 429
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.67 E-value=3e-08 Score=103.79 Aligned_cols=90 Identities=13% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCcEEEEEEcCCCccccc-ccHHHHHHHHHhCCCceEEEEEEC----------------------------ccchh----
Q psy12972 873 TTPHLILFYSDWCFACLQ-VEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQG---- 919 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~-l~p~~~~lA~~l~~~~v~~a~VDc----------------------------~~~~~---- 919 (1578)
.++++|.||++||++|+. +.|.+.++++.+++.++.+..|++ +....
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 109 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRI 109 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSS
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchh
Confidence 689999999999999999 599999999999887899999986 22334
Q ss_pred --hHhHcCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 920 --LARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 920 --L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+++.|+|.+ +|+++++ ++|+....+.|..+.+.|.+.|.+.+.
T Consensus 110 ~~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 110 PSTMKKYRLEG-TPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp CHHHHHTTCCS-SSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhHHHhcccCc-cceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 899999998 9999999 688887777798999999999987764
No 430
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.67 E-value=3.5e-09 Score=107.22 Aligned_cols=79 Identities=13% Similarity=0.108 Sum_probs=56.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc---cCccccccCCcc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL---FGTTDGFSGQDS 820 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~---~~~~~~i~g~~~ 820 (1578)
..++..+|++.+. +++++++|.||||||+||+++.|.|+++|+.+... .+.++.++++. +|...++.+
T Consensus 18 ~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~--- 92 (127)
T 3h79_A 18 VELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG--- 92 (127)
T ss_dssp EECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS---
T ss_pred EECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc---
Confidence 4567778888885 35789999999999999999999999999987532 24343333322 444444444
Q ss_pred ccccccccccCcccccccccc
Q psy12972 821 ASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 821 ~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
+||+.+|..+-
T Consensus 93 ----------~Pt~~~~~~g~ 103 (127)
T 3h79_A 93 ----------FPTMRYYTRID 103 (127)
T ss_dssp ----------SSEEEEECSSC
T ss_pred ----------CCEEEEEeCCC
Confidence 49988887653
No 431
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.67 E-value=4.7e-08 Score=101.82 Aligned_cols=87 Identities=14% Similarity=0.233 Sum_probs=74.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------------chhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------------EQGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------------~~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +..+++.|+|.
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV 108 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC
Confidence 57999999999999999999999999999988779999999987 57899999999
Q ss_pred ccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 928 SQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 928 ~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
+ +|+++++ ++|+....+ .+.+++.+++++.+.
T Consensus 109 ~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 109 G-FPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp S-SCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHT
T ss_pred c-CCeEEEECCCCeEEEee---CCHHHHHHHHHHHHh
Confidence 7 9999999 788876544 244677777776553
No 432
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.66 E-value=3.7e-08 Score=103.01 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=77.6
Q ss_pred CCcEEEEEEcCCCcccccc-cHHHHHHHHHhCCCceEEEEEECc----------------------------cch-----
Q psy12972 873 TTPHLILFYSDWCFACLQV-EPIFKKLMDELSPLGVGFFTVHVH----------------------------NEQ----- 918 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l-~p~~~~lA~~l~~~~v~~a~VDc~----------------------------~~~----- 918 (1578)
.++++|.||++||++|+.. .|.+.++++.+++.++.+..|+++ .+.
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 107 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMP 107 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhH
Confidence 6799999999999999996 999999999998777999999863 222
Q ss_pred hhHhHcCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCC
Q psy12972 919 GLARRLGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 919 ~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp 963 (1578)
.+++.|+|.+ +|+++++ ++|+....+.|..+.++|.+.+.+.+.
T Consensus 108 ~~~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 108 RTMAAYQMRG-TPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHTTCCS-SSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCC-CCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 5899999998 9999888 788887777788999999999987764
No 433
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.65 E-value=4.4e-08 Score=102.00 Aligned_cols=87 Identities=20% Similarity=0.413 Sum_probs=77.9
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC---------------------------ccchhhHhHcCc
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV---------------------------HNEQGLARRLGV 926 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc---------------------------~~~~~L~~k~gV 926 (1578)
++++|.||++||++|+...|.+.++++.+ ++.+..|++ +.+..+++.|+|
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKV 107 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSB
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCC
Confidence 78999999999999999999999999999 488999998 366789999999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhCCC
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKLPY 964 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~lp~ 964 (1578)
.+ +|+++++ ++|+....+.|..+.++|.+++++....
T Consensus 108 ~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 108 LG-QPWTFVVDREGKVVALFAGRAGREALLDALLLAGAD 145 (154)
T ss_dssp CS-SCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCC
T ss_pred Cc-ccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCc
Confidence 97 9998888 7898877777989999999999988754
No 434
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.65 E-value=5.4e-08 Score=98.13 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=75.0
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC----------------------------ccchhhHhH
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV----------------------------HNEQGLARR 923 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc----------------------------~~~~~L~~k 923 (1578)
.+++++|.||++||++|+...|.+.++++.+.. ++.+..|++ +.+..+++.
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 99 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGD-DYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLET 99 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTT-TEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCC-CcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHH
Confidence 367899999999999999999999999998544 488888854 335579999
Q ss_pred cCccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhh
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLK 961 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~ 961 (1578)
|+|.+ +|+++++ ++|+....+.|..+.+++.+++++.
T Consensus 100 ~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 100 YGVRS-YPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp TTCCS-SSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred cCccc-CCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 99997 9999999 8898877777989999999998753
No 435
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.65 E-value=2.5e-08 Score=121.15 Aligned_cols=132 Identities=19% Similarity=0.190 Sum_probs=86.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+..++..||||.....-.. . .+|++
T Consensus 46 ~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----------------------~------------------~~E~~ 84 (394)
T 4e7w_A 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----------------------K------------------NRELQ 84 (394)
T ss_dssp EEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----------------------C------------------CHHHH
T ss_pred EEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----------------------H------------------HHHHH
Confidence 689999999999999887777999977532110 0 12444
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCC---Cc--eEEEEeccCCCcCCchhhHh--hcCCCHHHHHHHHHHHH--HHHHHHc
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKS---ST--RVLTTEFIDGVKISDKEGLL--EKGFSLADVDRKLFTAF--AEQIFQT 559 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~---t~--~VLVME~i~G~~l~d~~~l~--~~~~~~~~v~~~l~~~~--l~~i~~~ 559 (1578)
.++++ .+...+.+-.++..-. .. -+|||||++|..+..+.... ...++...+...+.+++ +..+|..
T Consensus 85 il~~l----~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (394)
T 4e7w_A 85 IMRIV----KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160 (394)
T ss_dssp HHHTC----CCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhC----CCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44333 2333344433332211 11 45999999885444332211 34566666665555555 7889999
Q ss_pred CccccCCCCCCCCCC----eeEEecCCchh
Q psy12972 560 GFVHADPHSGNDVNT----WLYPVDLGDKF 585 (1578)
Q Consensus 560 G~vH~DpHPGNilv~----~v~liDfG~~~ 585 (1578)
|++|+|+||.|||+. .++++|||...
T Consensus 161 ~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999999999974 48999999764
No 436
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.63 E-value=4.3e-07 Score=103.42 Aligned_cols=195 Identities=15% Similarity=0.172 Sum_probs=128.7
Q ss_pred Eeecc-ccccceecccCCCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEE
Q psy12972 856 LSTTH-WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIA 934 (1578)
Q Consensus 856 i~Lt~-~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~ 934 (1578)
..|+. +.+++.+ ..+++++|.|+++|| ....+.|.++|..+++. +.|+.+ .+.++++++++++ |+|+
T Consensus 9 ~~l~s~~~~~~~l---~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~-~~F~~~---~~~~v~~~~~~~~--p~i~ 76 (252)
T 2h8l_A 9 VPLRTEEEFKKFI---SDKDASIVGFFDDSF---SEAHSEFLKAASNLRDN-YRFAHT---NVESLVNEYDDNG--EGII 76 (252)
T ss_dssp EECCSHHHHHHHH---TSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTT-SCEEEE---CCHHHHHHHCSSS--EEEE
T ss_pred eeecCHHHHHHHh---hcCCeEEEEEECCCC---ChHHHHHHHHHHhcccC-cEEEEE---ChHHHHHHhCCCC--CcEE
Confidence 34543 3444434 346789999999985 45678999999999776 888876 4578999999975 9999
Q ss_pred EEcCC--------ccccccCCCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEec-cC-Cch----H
Q psy12972 935 LLTDG--------RTSFFKEPSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQ-RS-LPV----R 1000 (1578)
Q Consensus 935 lf~~G--------~~~~y~~G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~-~~-~~~----~ 1000 (1578)
+|+.+ ....|..|.++.++|.+||....-| ++..+|.+++..+.+. .. +++++. +. ... .
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~P-lv~e~t~~n~~~~~~~----~~-~v~~~~~~~~~~~~~~~~ 150 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG-ICPHMTEDNKDLIQGK----DL-LIAYYDVDYEKNAKGSNY 150 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSC-SSCEECTTTHHHHSSS----SE-EEEEECCBTTTBHHHHHH
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhcccC-CeeecccccHhhhcCC----Ce-EEEEeecchhhcchhHHH
Confidence 99853 2333315888999999999876533 4888899998887322 32 334432 21 111 1
Q ss_pred H--HHHHHHhhcCCC---eEEEEEEcccCCChhHHhhcCC--C-CCCcEEEEeccCCCCCccccccCCCCchh--hhhhh
Q psy12972 1001 L--RYLINAFKHRTT---IVFGVIVYDQEDSSSVFQRFKV--P-GDKDSLLIFKEDKDRPSASITMNSIPVPT--LQDIT 1070 (1578)
Q Consensus 1001 ~--~~~~~a~~~~~~---v~Fg~v~~~~~~~~~l~~kf~V--~-~~~Ptllvfk~~~~~~~~~l~~~~l~~~~--L~~fI 1070 (1578)
+ .....|.+++++ +.|++++.+ ....+++.||+ . ...|++++++.... .|...++++... |.+|+
T Consensus 151 ~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~---ky~~~~~~t~~~~~i~~F~ 225 (252)
T 2h8l_A 151 WRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSRDGKALERFL 225 (252)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSC---EEECCSCCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCc---EecCCcccCcchHHHHHHH
Confidence 1 112233355555 999999654 56678999999 3 25789999854222 222234566666 88887
Q ss_pred hcC
Q psy12972 1071 DNN 1073 (1578)
Q Consensus 1071 ~~n 1073 (1578)
+.-
T Consensus 226 ~~~ 228 (252)
T 2h8l_A 226 QDY 228 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 437
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.62 E-value=2.8e-08 Score=97.87 Aligned_cols=78 Identities=9% Similarity=0.229 Sum_probs=69.2
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHH
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQK 953 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~ 953 (1578)
.+.++.|+++||+.|+.+.|.+++++.++. +.+.+||.+++++++.+||+ . .|++++|.+|+... .|..+.+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId~d~~l~~~ygv-~-VP~l~~~~dG~~v~--~g~~~~~~ 101 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINIDGNEHLTRLYND-R-VPVLFAVNEDKELC--HYFLDSDV 101 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETTTCHHHHHHSTT-S-CSEEEETTTTEEEE--CSSCCCHH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECCCCHHHHHHhCC-C-CceEEEEECCEEEE--ecCCCHHH
Confidence 356999999999999999999999998874 88999999999999999999 4 89999999998762 37788899
Q ss_pred HHHHH
Q psy12972 954 MVEFF 958 (1578)
Q Consensus 954 L~~fi 958 (1578)
|.+|+
T Consensus 102 L~~~L 106 (107)
T 2fgx_A 102 IGAYL 106 (107)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99887
No 438
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.61 E-value=7.5e-08 Score=112.00 Aligned_cols=95 Identities=16% Similarity=0.070 Sum_probs=72.6
Q ss_pred hHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCC
Q psy12972 386 EVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFD 465 (1578)
Q Consensus 386 ~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~ 465 (1578)
.+.+.+++.+|.++.+ -+|++.|++++||++++.+|+.|+||+.+++-...
T Consensus 4 ~v~~~i~~~lG~~~~~------~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~----------------------- 54 (288)
T 3d1u_A 4 SVAARVTELTGREVAA------VAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL----------------------- 54 (288)
T ss_dssp HHHHHHHHHHCCCEEE------EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC-----------------------
T ss_pred HHHHHHHHHhCCCccc------eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcch-----------------------
Confidence 3667888999998754 38999999999999999999999999976532100
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCC
Q psy12972 466 FQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKIS 529 (1578)
Q Consensus 466 ~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~ 529 (1578)
.-.|..|++.++.++. ...+.||+++.. ...+|||||++|.+++
T Consensus 55 --------------~~~~~~E~~~L~~L~~----~~~v~vP~v~~~--~~~~lvme~l~g~~~~ 98 (288)
T 3d1u_A 55 --------------DGLFRAEALGLDWLGR----SFGSPVPQVAGW--DDRTLAMEWVDERPPT 98 (288)
T ss_dssp --------------TTHHHHHHHHHHHHTC----STTCCSCCEEEE--ETTEEEEECCCCCCCC
T ss_pred --------------hHHHHHHHHHHHHHHh----cCCCCcCeEEEe--cCcEEEEEecccCCCC
Confidence 0124778888887763 235789999853 4679999999999875
No 439
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.61 E-value=8e-09 Score=120.79 Aligned_cols=135 Identities=15% Similarity=0.099 Sum_probs=88.8
Q ss_pred cccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHH
Q psy12972 409 NPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGR 488 (1578)
Q Consensus 409 ~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~ 488 (1578)
+.||.|++|.||+|+... .||||+.+......- .. -.+.+|++
T Consensus 39 ~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~-------------------~~----------------~~~~~e~~ 81 (319)
T 2y4i_B 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED-------------------QL----------------KAFKREVM 81 (319)
T ss_dssp CBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC-------------------CC----------------CCCCTTGG
T ss_pred eEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH-------------------HH----------------HHHHHHHH
Confidence 689999999999998743 599999865321100 00 01123333
Q ss_pred HHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCchhhHhhcCCCHHHHHHHHHHHH--HHHHHHcCccccCC
Q psy12972 489 NAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISDKEGLLEKGFSLADVDRKLFTAF--AEQIFQTGFVHADP 566 (1578)
Q Consensus 489 n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d~~~l~~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~Dp 566 (1578)
.+.++ .+...+.+-.++. ....-++||||++|.+|.++..-....++...+...+.+++ +..+|..|++|+|+
T Consensus 82 ~l~~l----~h~~iv~~~~~~~-~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl 156 (319)
T 2y4i_B 82 AYRQT----RHENVVLFMGACM-SPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDL 156 (319)
T ss_dssp GGTTC----CCTTBCCCCEEEE-CSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHhcC----CCCCEeEEEEEEe-cCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence 33332 2222233333332 23456899999999999887432223467666666666655 78899999999999
Q ss_pred CCCCCCCC--eeEEecCCchh
Q psy12972 567 HSGNDVNT--WLYPVDLGDKF 585 (1578)
Q Consensus 567 HPGNilv~--~v~liDfG~~~ 585 (1578)
+|.||++. .++++|||...
T Consensus 157 kp~NIl~~~~~~~l~Dfg~~~ 177 (319)
T 2y4i_B 157 KSKNVFYDNGKVVITDFGLFS 177 (319)
T ss_dssp CSTTEEEC--CCEECCCSCCC
T ss_pred ChhhEEEeCCCEEEeecCCcc
Confidence 99999965 58899999753
No 440
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.60 E-value=1.3e-08 Score=102.50 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=58.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCcccccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNH 828 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i 828 (1578)
.++..+|.+.+.+++.+++++|.||||||++|+.+.|.++++|+++.+ +.++.++.+......+ +
T Consensus 7 ~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~~~~~~~-------------v 71 (118)
T 3evi_A 7 EISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNSCIQHYH-------------D 71 (118)
T ss_dssp ECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGGTSTTCC-------------G
T ss_pred EeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHHhHHHCC-------------C
Confidence 346678888887655566999999999999999999999999999864 5565665555433333 3
Q ss_pred ccCcccccccccc
Q psy12972 829 MYNPFDDVFSEGF 841 (1578)
Q Consensus 829 ~~~Ptiklf~~~~ 841 (1578)
..-||+.+|++|.
T Consensus 72 ~~~PT~~~fk~G~ 84 (118)
T 3evi_A 72 NCLPTIFVYKNGQ 84 (118)
T ss_dssp GGCSEEEEEETTE
T ss_pred CCCCEEEEEECCE
Confidence 3449998988764
No 441
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.60 E-value=5.1e-09 Score=103.10 Aligned_cols=73 Identities=22% Similarity=0.388 Sum_probs=51.3
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.. .++++++|+|||||||||+.+.|.|+++++.+.+.. ++.++.+. +++..++.
T Consensus 9 ~~f~~~l~~-~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~--~~~vd~d~~~~l~~~~~V~------------- 72 (105)
T 3zzx_A 9 EDFTKQLNE-AGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVV--FLKVDVDECEDIAQDNQIA------------- 72 (105)
T ss_dssp HHHHHHHHH-TTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEE--EEEEETTTCHHHHHHTTCC-------------
T ss_pred HHHHHHHHh-cCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeE--EEEEecccCHHHHHHcCCC-------------
Confidence 356665532 357899999999999999999999999999987543 33333332 34444444
Q ss_pred cCcccccccccc
Q psy12972 830 YNPFDDVFSEGF 841 (1578)
Q Consensus 830 ~~Ptiklf~~~~ 841 (1578)
..||+.+|.+|-
T Consensus 73 ~~PT~~~~~~G~ 84 (105)
T 3zzx_A 73 CMPTFLFMKNGQ 84 (105)
T ss_dssp BSSEEEEEETTE
T ss_pred eecEEEEEECCE
Confidence 449988887653
No 442
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.58 E-value=4.8e-08 Score=103.49 Aligned_cols=86 Identities=16% Similarity=0.303 Sum_probs=71.2
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEE-----------------------CccchhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVH-----------------------VHNEQGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VD-----------------------c~~~~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.++++++. ++.+..|+ ++.+..+++.|+|.+
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 468999999999999999999999999876 47777777 345668999999997
Q ss_pred cCCcEE-EEcCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 929 QLPQIA-LLTDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 929 ~~PTl~-lf~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+ +.++|+....+.|..+.+.+.+++++.+
T Consensus 126 -~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 126 -APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp -SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred -cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 99554 5578988766678889999988887655
No 443
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.58 E-value=2.8e-08 Score=106.50 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=64.3
Q ss_pred ccccccceecccCCCCcEEEEEEcCCCcccccccH-HH--HHHHHHhCCCceEEEEEECccchhhHhHc--------Ccc
Q psy12972 859 THWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEP-IF--KKLMDELSPLGVGFFTVHVHNEQGLARRL--------GVG 927 (1578)
Q Consensus 859 t~~nF~~~vl~~s~~~~~LV~FyapwCg~Ck~l~p-~~--~~lA~~l~~~~v~~a~VDc~~~~~L~~k~--------gV~ 927 (1578)
+++.|.... ..++++||.|||+||++|+.+.| .| .++++.+++. +.+++||.++.+++++.| ||.
T Consensus 28 ~~ea~~~A~---~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~-fv~ikVD~de~~~l~~~y~~~~q~~~gv~ 103 (173)
T 3ira_A 28 GEEAFEKAR---KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA-FVSIKVDREERPDIDNIYMTVCQIILGRG 103 (173)
T ss_dssp SHHHHHHHH---HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH-CEEEEEETTTCHHHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHH---HhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc-CceeeeCCcccCcHHHHHHHHHHHHcCCC
Confidence 344555433 34799999999999999999999 44 5777777653 889999999999999998 999
Q ss_pred ccCCcEEEEc-CCccc
Q psy12972 928 SQLPQIALLT-DGRTS 942 (1578)
Q Consensus 928 ~~~PTl~lf~-~G~~~ 942 (1578)
+ +||+++|. +|+++
T Consensus 104 g-~Pt~v~l~~dG~~v 118 (173)
T 3ira_A 104 G-WPLNIIMTPGKKPF 118 (173)
T ss_dssp C-SSEEEEECTTSCEE
T ss_pred C-CcceeeECCCCCce
Confidence 8 99999995 78765
No 444
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.57 E-value=3e-08 Score=105.96 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=67.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcC---ccccCCcEEEEcCC-ccccccCC
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLG---VGSQLPQIALLTDG-RTSFFKEP 947 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~g---V~~~~PTl~lf~~G-~~~~y~~G 947 (1578)
.+++++|.|||+||++|+.+.|.+++++..+. ++.+..||.+.+++++.+|+ |.+ +||+++|.+| +..... |
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d~~~~~~~~~~~~~v~~-iPt~i~~~~~G~~~~~~-g 128 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKGRAEDDLRQRLALERIA-IPLVLVLDEEFNLLGRF-V 128 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHHHHHHHTTTTTTCSSCC-SSEEEEECTTCCEEEEE-E
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECCCCHHHHHHHHHcCCCC-cCeEEEECCCCCEEEEE-c
Confidence 35789999999999999999999999998875 38999999999999999997 997 9999999875 655444 5
Q ss_pred CCCHHHHHHHHH
Q psy12972 948 SFSVQKMVEFFR 959 (1578)
Q Consensus 948 ~~s~~~L~~fi~ 959 (1578)
.+. ..+.+.+.
T Consensus 129 ~~p-~~~~~~i~ 139 (167)
T 1z6n_A 129 ERP-QAVLDGGP 139 (167)
T ss_dssp SSC-HHHHHHCH
T ss_pred CCC-HHHHHhHH
Confidence 444 44444443
No 445
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.57 E-value=4.1e-08 Score=93.19 Aligned_cols=74 Identities=20% Similarity=0.357 Sum_probs=63.8
Q ss_pred EEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCCccccccCCCCCHHHHHH
Q psy12972 877 LILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSFSVQKMVE 956 (1578)
Q Consensus 877 LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~s~~~L~~ 956 (1578)
++.|++|||++|+.+.|.+++++..+ +.+||.+++++++++||++ .||+++ .+|+.+. |..+.+.|.+
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid~~~~l~~~~g~~--vPtl~~-~~G~~v~---g~~~~~~L~~ 70 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA------FFSVFIDDDAALESAYGLR--VPVLRD-PMGRELD---WPFDAPRLRA 70 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECTTCHHHHHHHTTT--CSEEEC-TTCCEEE---SCCCHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh------eEEEECCCCHHHHHHhCCC--cCeEEE-ECCEEEe---CCCCHHHHHH
Confidence 78899999999999999998876432 6799999999999999994 899998 8888763 7789999999
Q ss_pred HHHhhC
Q psy12972 957 FFRLKL 962 (1578)
Q Consensus 957 fi~~~l 962 (1578)
++.+.+
T Consensus 71 ~l~~~~ 76 (87)
T 1ttz_A 71 WLDAAP 76 (87)
T ss_dssp HHHTCC
T ss_pred HHHHHH
Confidence 997655
No 446
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.56 E-value=7.4e-07 Score=101.41 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=127.9
Q ss_pred ccccceecccCC-CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchhhHhHcCccccCCcEEEEcCC
Q psy12972 861 WNFEKNYIPKSY-TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQGLARRLGVGSQLPQIALLTDG 939 (1578)
Q Consensus 861 ~nF~~~vl~~s~-~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~L~~k~gV~~~~PTl~lf~~G 939 (1578)
+++++.+ +. +++++|.|++++| ....+.|.++|+.+++. +.|+.+ .+.++++++++++ |+|++|+.+
T Consensus 15 ~~~~~~~---~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t---~~~~v~~~~~v~~--p~ivlfk~~ 82 (250)
T 3ec3_A 15 KQVQEFL---KDGDDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT---FSTEIAKFLKVSL--GKLVLMQPE 82 (250)
T ss_dssp HHHHHHH---HHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE---CCHHHHHHHTCCS--SEEEEECCG
T ss_pred HHHHHHH---hcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE---CcHHHHHHcCCCC--CeEEEEecc
Confidence 5566554 33 6899999999985 46778999999999876 888875 4678999999975 999999852
Q ss_pred --------ccccccC-CCCCHHHHHHHHHhhCCCccccccccccHHHHhhcccCCCcEEEEEeccCC---chH----HH-
Q psy12972 940 --------RTSFFKE-PSFSVQKMVEFFRLKLPYKLIVPLSATNVDAFLDNWREDNKVHALLFQRSL---PVR----LR- 1002 (1578)
Q Consensus 940 --------~~~~y~~-G~~s~~~L~~fi~~~lp~~vv~~it~~~~~~fl~~~~~~~~~~VlfF~~~~---~~~----~~- 1002 (1578)
....|.+ |.++.++|.+|+....-| ++..+|.++...+..+. ..++++++.+.. ... ..
T Consensus 83 ~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~P-lv~e~t~~n~~~~~~~~---~l~~~~~~~d~~~~~~~~~~~~~~~ 158 (250)
T 3ec3_A 83 KFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALP-LVGHRKTSNDAKRYSKR---PLVVVYYSVDFSFDYRTATQFWRNK 158 (250)
T ss_dssp GGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSC-TEEEECTTTHHHHSCSS---SEEEEEECCCCSTTTHHHHHHHHHH
T ss_pred hhhccccccceeccCCCCCCHHHHHHHHHHcCCC-ceeecCccchhhhhccC---ccEEEEEecccccccchhHHHHHHH
Confidence 2344543 579999999999877643 47888888888766432 333333322211 111 12
Q ss_pred HHHHHhhcCCCeEEEEEEcccCCChhHHhhcCCCC--CCcEEEEeccCCCCCcccc-ccCCCCchhhhhhhhcC
Q psy12972 1003 YLINAFKHRTTIVFGVIVYDQEDSSSVFQRFKVPG--DKDSLLIFKEDKDRPSASI-TMNSIPVPTLQDITDNN 1073 (1578)
Q Consensus 1003 ~~~~a~~~~~~v~Fg~v~~~~~~~~~l~~kf~V~~--~~Ptllvfk~~~~~~~~~l-~~~~l~~~~L~~fI~~n 1073 (1578)
+...|.+++ ++.|++++. ......++.||+.. .+|.++++..+.. .|. ..++++...|.+|++.-
T Consensus 159 ~~~vAk~~k-ki~F~~~d~--~~~~~~l~~fgl~~~~~~p~~~~~~~~~~---ky~~~~~~~t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 159 VLEVAKDFP-EYTFAIADE--EDYATEVKDLGLSESGGDVNAAILDESGK---KFAMEPEEFDSDALREFVMAF 226 (250)
T ss_dssp HHHHHTTCT-TSEEEEEET--TTTHHHHHHTTCSSCSCSCEEEEECTTSC---EEECCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHhhc-ceeEEEEcH--HHHHHHHHHcCCCccCCCcEEEEEcCCCc---eecCCcccCCHHHHHHHHHHH
Confidence 222333577 899999854 35667788999974 3567877753221 222 22467777888887654
No 447
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.56 E-value=2.1e-08 Score=115.79 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=61.4
Q ss_pred EEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------cchhhHhHcCccccCCcEEEEcCCccccccCCCC
Q psy12972 876 HLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------NEQGLARRLGVGSQLPQIALLTDGRTSFFKEPSF 949 (1578)
Q Consensus 876 ~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------~~~~L~~k~gV~~~~PTl~lf~~G~~~~y~~G~~ 949 (1578)
.+|+||||||+||+++.|.|+++|++++ .|||+ +++++|++++|++ +||+++ +|+. +.|.+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~-------~Vd~d~~d~~~~~~~la~~~gI~~-vPT~~i--~G~~---~~G~~ 266 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP-------YVECSPNGPGTPQAQECTEAGITS-YPTWII--NGRT---YTGVR 266 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC-------EEESCSSCSSSCCCHHHHTTTCCS-TTEEEE--TTEE---EESCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC-------EEEEeecCchhhHHHHHHHcCCcc-cCeEEE--CCEE---ecCCC
Confidence 4799999999999999999999997763 45555 3789999999998 999554 8864 56999
Q ss_pred CHHHHHHHHHhhC
Q psy12972 950 SVQKMVEFFRLKL 962 (1578)
Q Consensus 950 s~~~L~~fi~~~l 962 (1578)
+.++|.+|+.-+.
T Consensus 267 ~~~~L~~~l~~~~ 279 (291)
T 3kp9_A 267 SLEALAVASGYPL 279 (291)
T ss_dssp CHHHHHHHTCCCC
T ss_pred CHHHHHHHHCCCC
Confidence 9999999986444
No 448
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.55 E-value=5.4e-08 Score=118.97 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=46.4
Q ss_pred eEEEEeccCCCcCCchhhHh------hcCCCHHHHHHHHHHHH--HHHHHHcCccccCCCCCCCCCC---eeEEecCCch
Q psy12972 516 RVLTTEFIDGVKISDKEGLL------EKGFSLADVDRKLFTAF--AEQIFQTGFVHADPHSGNDVNT---WLYPVDLGDK 584 (1578)
Q Consensus 516 ~VLVME~i~G~~l~d~~~l~------~~~~~~~~v~~~l~~~~--l~~i~~~G~vH~DpHPGNilv~---~v~liDfG~~ 584 (1578)
.+++|+.. +.+|.++.... ...++...+...+.+++ +..+|..|++|||+||.|||+. .++++|||..
T Consensus 180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a 258 (413)
T 3dzo_A 180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258 (413)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGC
T ss_pred eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccce
Confidence 46777766 55777664311 11122233333334444 7889999999999999999965 5999999975
Q ss_pred h
Q psy12972 585 F 585 (1578)
Q Consensus 585 ~ 585 (1578)
.
T Consensus 259 ~ 259 (413)
T 3dzo_A 259 V 259 (413)
T ss_dssp E
T ss_pred e
Confidence 3
No 449
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.55 E-value=3e-08 Score=98.95 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=54.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC----Ccceeeeeecc--cCccccccCCcccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL----GVGFFTVHYDL--FGTTDGFSGQDSAS 822 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~----~vg~v~~~~~~--~~~~~~i~g~~~~~ 822 (1578)
.++..+|+..+. .++++++|.||||||+||+++.|.|+++++.+++. .+.++.++.+. ++.
T Consensus 11 ~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~----------- 77 (121)
T 2djj_A 11 VVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD----------- 77 (121)
T ss_dssp ECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-----------
T ss_pred EecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-----------
Confidence 455667887764 36789999999999999999999999999999862 34444333322 222
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
.+..+||+.+|..+
T Consensus 78 ----~v~~~Pt~~~~~~~ 91 (121)
T 2djj_A 78 ----EIQGFPTIKLYPAG 91 (121)
T ss_dssp ----CCSSSSEEEEECSS
T ss_pred ----ccCcCCeEEEEeCc
Confidence 34455998888765
No 450
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.55 E-value=8.4e-08 Score=109.24 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=56.4
Q ss_pred ccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHHHhHHHHHHH
Q psy12972 410 PIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFDFQWVINELKVPLEQELDFLNEGRN 489 (1578)
Q Consensus 410 PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~~~~~~~e~~~~l~~ElDf~~Ea~n 489 (1578)
.++.+|.++||++.. +|+.++||+.+++.... .-++++|++.
T Consensus 21 ~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~-------------------------------------~~~~~~E~~~ 62 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT-------------------------------------TYDVEREKDM 62 (263)
T ss_dssp CCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTS-------------------------------------TTCHHHHHHH
T ss_pred eccCCCCCeEEEEEC-CCCcEEEEeCCcccCCC-------------------------------------HHHHHHHHHH
Confidence 467788899999975 47899999998653210 0135788888
Q ss_pred HHHHHHhhCCCCCeeecEEeeCC--CCceEEEEeccCCCcCCch
Q psy12972 490 AERCSKDLAHLPYVYIPRILWDK--SSTRVLTTEFIDGVKISDK 531 (1578)
Q Consensus 490 ~~r~~~~~~~~~~v~vP~v~~~~--~t~~VLVME~i~G~~l~d~ 531 (1578)
++.++. .+.||+++.-. .+..+|||||++|.++.+.
T Consensus 63 l~~l~~------~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 100 (263)
T 3tm0_A 63 MLWLEG------KLPVPKVLHFERHDGWSNLLMSEADGVLCSEE 100 (263)
T ss_dssp HHHHTT------TSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred HHHHhc------CCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence 888753 26788887533 3456799999999998764
No 451
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.55 E-value=1e-07 Score=97.77 Aligned_cols=86 Identities=14% Similarity=0.346 Sum_probs=70.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHH---HHHHhCCCceEEEEEECccchhh------------------------HhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQGL------------------------ARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~---lA~~l~~~~v~~a~VDc~~~~~L------------------------~~k~g 925 (1578)
.++++|.||++||++|+...|.+.+ +.+.+++.++.+..|+++.+.+. ++.|+
T Consensus 27 gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 106 (142)
T 3ewl_A 27 AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYD 106 (142)
T ss_dssp CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcC
Confidence 6799999999999999999999988 88888766799999998865543 44899
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|.+ +|+++++ ++|+... +..+.++|.+++++..
T Consensus 107 v~~-~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 107 IRA-TPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CCS-SSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred CCC-CCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 997 9999999 6776644 4578899999987653
No 452
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.54 E-value=1.4e-07 Score=101.57 Aligned_cols=89 Identities=12% Similarity=0.293 Sum_probs=75.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCce------EEEEEECcc-chhhHhHc---------------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGV------GFFTVHVHN-EQGLARRL--------------------- 924 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v------~~a~VDc~~-~~~L~~k~--------------------- 924 (1578)
.++++|.||++||++|+...|.+.++++.+++.++ .|..|+++. +.+.+++|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 138 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAAS 138 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHH
Confidence 67999999999999999999999999999987667 999999988 66666666
Q ss_pred ----CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 925 ----GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 ----gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+....+.|..+.++|.+++.+.+
T Consensus 139 ~~~~~v~~-~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 139 LGGVPASV-IPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp TTTCCTTC-CSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred hccCCCCC-CCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 6887 9976665 78988777778889999999998754
No 453
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.54 E-value=1.9e-07 Score=97.94 Aligned_cols=89 Identities=18% Similarity=0.372 Sum_probs=75.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc-------------------chhhHhHcCccccCCcE
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN-------------------EQGLARRLGVGSQLPQI 933 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~-------------------~~~L~~k~gV~~~~PTl 933 (1578)
.++++|.||++||++|+...|.+.++++.+.+.++.+..|+++. +.++++.|+|.+ +|++
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~-~P~~ 119 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANR-LPDT 119 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCS-SSEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCC-cceE
Confidence 57999999999999999999999999999987679999999987 678999999997 9997
Q ss_pred EEE-cCCccccccCCC--CCHHHHHHHHHhhC
Q psy12972 934 ALL-TDGRTSFFKEPS--FSVQKMVEFFRLKL 962 (1578)
Q Consensus 934 ~lf-~~G~~~~y~~G~--~s~~~L~~fi~~~l 962 (1578)
+++ ++|+....+.|. .+..++++.+.+..
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTTC
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhhc
Confidence 777 788877655564 44567777776554
No 454
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.54 E-value=1.6e-07 Score=97.67 Aligned_cols=91 Identities=13% Similarity=0.315 Sum_probs=75.4
Q ss_pred CCCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc-----------------------hhhHhHcCccc
Q psy12972 872 YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----------------------QGLARRLGVGS 928 (1578)
Q Consensus 872 ~~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~-----------------------~~L~~k~gV~~ 928 (1578)
.+++++|.||++||++|+...|.+.++++.+.+.++.+..|+++.+ ..+++.|+|.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 3689999999999999999999999999999887799999999875 34899999997
Q ss_pred cCCcEEEE-cCCccccccCCCC--CHHHHHHHHHhhCC
Q psy12972 929 QLPQIALL-TDGRTSFFKEPSF--SVQKMVEFFRLKLP 963 (1578)
Q Consensus 929 ~~PTl~lf-~~G~~~~y~~G~~--s~~~L~~fi~~~lp 963 (1578)
+|+++++ ++|+....+.|.. +.+++.+++++...
T Consensus 107 -~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 -VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp -BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred -CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 9976666 7888776555654 66799999987653
No 455
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.53 E-value=1.6e-07 Score=99.12 Aligned_cols=85 Identities=12% Similarity=0.381 Sum_probs=73.6
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc------------------cc-----------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH------------------NE----------------- 917 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~------------------~~----------------- 917 (1578)
.++++|.||++||++|+...|.+.++++.+. ++.|..|+++ ..
T Consensus 37 gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 37 GDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp SSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 5899999999999999999999999999998 5999999987 33
Q ss_pred -----hhhHhHcCccccCCcEEEE-cCCccccccCCCC-CHHHHHHHHHhhC
Q psy12972 918 -----QGLARRLGVGSQLPQIALL-TDGRTSFFKEPSF-SVQKMVEFFRLKL 962 (1578)
Q Consensus 918 -----~~L~~k~gV~~~~PTl~lf-~~G~~~~y~~G~~-s~~~L~~fi~~~l 962 (1578)
..+++.|+|.+ +|+++++ ++|+... .|.. +.+.|.+++++.+
T Consensus 115 ~~~d~~~~~~~~~v~~-~P~~~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRS-IDYIVIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCS-SSEEEEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCC-ceEEEEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 37899999997 9999999 6787665 5777 8899999987654
No 456
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.53 E-value=1.4e-08 Score=105.84 Aligned_cols=74 Identities=15% Similarity=0.244 Sum_probs=56.1
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|+..+.. +++++++|.|||+|||+|+.++|.++++|+++.+. +.++.+++|. ++..+++.+
T Consensus 30 ~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~~e~a~~y~V~s------------ 95 (160)
T 2av4_A 30 WAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEVPDFNTMYELYD------------ 95 (160)
T ss_dssp HHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTCCTTTTTTTCCS------------
T ss_pred HHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCCC------------
Confidence 578888853 46789999999999999999999999999999754 3466666665 344444433
Q ss_pred cCcccccccccc
Q psy12972 830 YNPFDDVFSEGF 841 (1578)
Q Consensus 830 ~~Ptiklf~~~~ 841 (1578)
.||+.+|.+|-
T Consensus 96 -iPT~~fFk~G~ 106 (160)
T 2av4_A 96 -PVSVMFFYRNK 106 (160)
T ss_dssp -SEEEEEEETTE
T ss_pred -CCEEEEEECCE
Confidence 39988887664
No 457
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.50 E-value=1.7e-07 Score=96.30 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=69.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHH---HHHHhCCCceEEEEEECccchh------------------------hHhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKK---LMDELSPLGVGFFTVHVHNEQG------------------------LARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~---lA~~l~~~~v~~a~VDc~~~~~------------------------L~~k~g 925 (1578)
.++++|.||++||++|+...|.+.+ +.+.+++.++.+..|+.+.+.+ +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5899999999999999999999999 9999977779999999877633 478899
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHH
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
|.+ +|+++++ ++|+.+... .+.++|.+|++
T Consensus 111 v~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRA-IPTLYLLDKNKTVLLKD---ATLQKVEQYLA 141 (142)
T ss_dssp CTT-CSEEEEECTTCBEEEEE---ECHHHHHHHHH
T ss_pred CCc-CCeEEEECCCCcEEecC---CCHHHHHHHHh
Confidence 997 9999998 667665443 35688888875
No 458
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.50 E-value=1.7e-07 Score=97.93 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=73.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccchh-----------------------hHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNEQG-----------------------LARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~~~-----------------------L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.+.++++++++.++.+..|+++...+ +++.|+|.+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~- 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN- 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS-
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc-
Confidence 57899999999999999999999999999987779999999987653 889999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHH
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFF 958 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi 958 (1578)
+|+++++ ++|+....+.|..+.++...-.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~~ 143 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKKL 143 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHHH
Confidence 9999999 7898887777877766655443
No 459
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.49 E-value=3.1e-08 Score=114.67 Aligned_cols=79 Identities=24% Similarity=0.388 Sum_probs=56.8
Q ss_pred ccccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
...++..+|+..+ ..+.+++++|.||||||+||+.+.|.|+++++++++. +.++.++++. +|...++.+
T Consensus 9 v~~~~~~~f~~~~-~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~------ 80 (287)
T 3qou_A 9 IVNINESNLQQVL-EQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDAEQMIAAQFGLRA------ 80 (287)
T ss_dssp EEECCTTTHHHHH-TTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTTCHHHHHTTTCCS------
T ss_pred cEECCHHHHHHHH-HhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCccCHHHHHHcCCCC------
Confidence 3456677888844 5556899999999999999999999999999999863 3333333332 444444444
Q ss_pred cccccccCccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~ 840 (1578)
.||+.+|..|
T Consensus 81 -------~Pt~~~~~~G 90 (287)
T 3qou_A 81 -------IPTVYLFQNG 90 (287)
T ss_dssp -------SSEEEEEETT
T ss_pred -------CCeEEEEECC
Confidence 4888887654
No 460
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=98.49 E-value=4e-08 Score=117.95 Aligned_cols=120 Identities=10% Similarity=-0.012 Sum_probs=44.8
Q ss_pred HHHhHHHHHHHHHHHHhcCcchh-hhhhhhhcCCCCCChhHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCChhhcccccc
Q psy12972 83 ASVHQRSANRILSMCLTNGGLYI-KLGQGMVSLDHVLPRQYPHTLRALQDKCLLREKGEVDQLFLEDFGCTHSQLFRSFD 161 (1578)
Q Consensus 83 ~~~~~~~a~~l~~~~~~lgg~~i-K~GQ~ls~r~d~~p~~~~~~l~~Lqd~~p~~~~~~~~~~~~~~lg~~~~~~F~~f~ 161 (1578)
...+.+.|+++.+.+..+++..+ +++|.+...++..+ +++.++++|||++||.+.+++.+.++.+++.+..+.|.+|+
T Consensus 15 ~~~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (365)
T 2y7j_A 15 FNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSA-NLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFY 93 (365)
T ss_dssp --------------------------------------------------------------------CBCHHHHHHHHH
T ss_pred chHHHHHHHHHHhcCccchhcccccccccccCCCchhH-HHHHHHHhhhhcCCCCccccccccCCchhhcccchhhhhhh
Confidence 45567889999999999999999 89999888877554 57778999999999999999999999999999988888888
Q ss_pred c-----cceeeeeeceeee-----CCCEEEEEEeCCCch-----------hhHHhhHHHHHhh
Q psy12972 162 E-----NPIAAASLAQSMV-----TDEALGIKLHEFHEA-----------TNERPDHEFHEAT 203 (1578)
Q Consensus 162 ~-----~PiasASi~QVh~-----~g~~vavKv~~p~v~-----------~~i~~Dl~~~~~~ 203 (1578)
. ++||+||.||||+ +|+.||||+.+|+.. +.+...+.++..+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 156 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQV 156 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHh
Confidence 7 8999999999998 699999999999874 3445555566555
No 461
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.49 E-value=3e-08 Score=96.68 Aligned_cols=72 Identities=8% Similarity=0.021 Sum_probs=46.6
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCCccccccccccccC
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
.+|++.+ +++++++|.||||||++|+++.|.|+++++.+.+..+..+++..+. ++...++. ..
T Consensus 9 ~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~-------------~~ 72 (105)
T 4euy_A 9 EELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVF-------------TG 72 (105)
T ss_dssp -CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC---------C-------------CC
T ss_pred HHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCC-------------CC
Confidence 4666666 4678999999999999999999999999999854333333332221 44444443 34
Q ss_pred ccccccccc
Q psy12972 832 PFDDVFSEG 840 (1578)
Q Consensus 832 Ptiklf~~~ 840 (1578)
||+.+|.+|
T Consensus 73 Pt~~~~~~G 81 (105)
T 4euy_A 73 PTVLLFYNG 81 (105)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEeCC
Confidence 888787654
No 462
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.48 E-value=6.8e-08 Score=98.14 Aligned_cols=77 Identities=19% Similarity=0.239 Sum_probs=55.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC-Ccceeeeeecc---cCccccccCCcccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL-GVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~-~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
.++..+|+..+.. ++++++|.||||||+||+++.|.|+++++.+++. .+.++.++.+. ++...
T Consensus 11 ~l~~~~~~~~~~~--~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~----------- 77 (133)
T 2dj3_A 11 VVVGKTFDAIVMD--PKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQY----------- 77 (133)
T ss_dssp ECCTTTCCCCCTC--TTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSC-----------
T ss_pred EEcCCCHHHHhcc--CCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhc-----------
Confidence 4556678887743 5789999999999999999999999999999853 45454443332 22222
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
.+...||+.++..+
T Consensus 78 --~v~~~Pt~~~~~~g 91 (133)
T 2dj3_A 78 --KVEGFPTIYFAPSG 91 (133)
T ss_dssp --CCSSSSEEEEECTT
T ss_pred --CCCcCCEEEEEeCC
Confidence 34445898887754
No 463
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.47 E-value=1.3e-07 Score=98.50 Aligned_cols=86 Identities=12% Similarity=0.329 Sum_probs=70.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------cchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------NEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------~~~~L~~k~gV~~~ 929 (1578)
+++++|.||++||++|+...|.++++++. + ++.+..|+++ .+..+++.|+|.+
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 117 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--K-RFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYG- 117 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--T-TSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCS-
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--C-CeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCc-
Confidence 67999999999999999999999998876 2 3788887753 3557899999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+++++ ++|+....+.|..+.+++.+++.+.+
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHH
Confidence 9976666 78887776678889999998887654
No 464
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.46 E-value=4.4e-08 Score=100.56 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=56.6
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. ...+++++|.||||||++|+++.|.|+++++.+++.++.++.++++. ++...++.+.
T Consensus 11 ~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~------- 82 (137)
T 2dj0_A 11 YFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTS------- 82 (137)
T ss_dssp ECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCC-------
T ss_pred EccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCccc-------
Confidence 345567777763 23455999999999999999999999999999986555554444332 3444444311
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
..+...||+.+|.+|
T Consensus 83 ~~~~~~Pt~~~~~~G 97 (137)
T 2dj0_A 83 PLTKQLPTLILFQGG 97 (137)
T ss_dssp SSSSCSSEEEEESSS
T ss_pred CCcCCCCEEEEEECC
Confidence 112255998888655
No 465
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.44 E-value=8e-08 Score=97.21 Aligned_cols=76 Identities=28% Similarity=0.435 Sum_probs=54.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. .++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. +|...++
T Consensus 21 ~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~l~~~~~v---------- 87 (130)
T 2dml_A 21 ELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADKHQSLGGQYGV---------- 87 (130)
T ss_dssp ECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHHTC----------
T ss_pred ECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCCCHHHHHHcCC----------
Confidence 456678888775 35789999999999999999999999999999863 3333333222 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.+|..+
T Consensus 88 ---~~~Pt~~~~~~~ 99 (130)
T 2dml_A 88 ---QGFPTIKIFGAN 99 (130)
T ss_dssp ---CSSSEEEEESSC
T ss_pred ---CccCEEEEEeCC
Confidence 344888787754
No 466
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.44 E-value=3.4e-07 Score=94.22 Aligned_cols=71 Identities=13% Similarity=0.243 Sum_probs=61.5
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK 107 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC
Confidence 57899999999999999999999999999984 4589999998753 5799999999
Q ss_pred ccCCcEEEEc--CCccccc
Q psy12972 928 SQLPQIALLT--DGRTSFF 944 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~y 944 (1578)
+ +||++++. +|+.+..
T Consensus 108 ~-~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 108 S-IPTLVGVEADSGNIITT 125 (144)
T ss_dssp S-SSEEEEEETTTCCEEES
T ss_pred C-CCEEEEEECCCCcEEec
Confidence 7 99999995 7876543
No 467
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.43 E-value=5.4e-08 Score=99.95 Aligned_cols=76 Identities=13% Similarity=0.095 Sum_probs=54.7
Q ss_pred cccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecccCccccccCCccccccccccc
Q psy12972 750 TTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDLFGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 750 l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
++..+|...+...+.+++++|.||||||++|+.+.|.|+++|+.+.+ +.++.++.+..... ..+.
T Consensus 15 i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~--v~~~~vd~~~~~~~-------------~~i~ 79 (135)
T 2dbc_A 15 ISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPE--TKFVKAIVNSCIEH-------------YHDN 79 (135)
T ss_dssp CCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSS--EEEEEECCSSSCSS-------------CCSS
T ss_pred cCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--cEEEEEEhhcCccc-------------CCCC
Confidence 45667888886655568999999999999999999999999998853 44444443333222 2344
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.+|..|
T Consensus 80 ~~Pt~~~~~~G 90 (135)
T 2dbc_A 80 CLPTIFVYKNG 90 (135)
T ss_dssp CCSEEEEESSS
T ss_pred CCCEEEEEECC
Confidence 45998887755
No 468
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.42 E-value=2.2e-07 Score=100.89 Aligned_cols=88 Identities=16% Similarity=0.316 Sum_probs=75.1
Q ss_pred CcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECc-----------------------------cchhhHhHc
Q psy12972 874 TPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVH-----------------------------NEQGLARRL 924 (1578)
Q Consensus 874 ~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~-----------------------------~~~~L~~k~ 924 (1578)
.+++|.||++||++|+...|.+.++.+++.+.++.+..|+++ .+..+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 359999999999999999999999999998767999999983 456799999
Q ss_pred CccccCCcEEEE-cCCccccc---------cCCCCCHHHHHHHHHhhC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFF---------KEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y---------~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+.... +.|..+.++|.+.|++.+
T Consensus 127 ~v~~-~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 127 DAAC-TPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp TCCE-ESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CCCC-CCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHH
Confidence 9997 9999988 68876644 357778899999998765
No 469
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=5.7e-07 Score=93.34 Aligned_cols=86 Identities=14% Similarity=0.281 Sum_probs=73.0
Q ss_pred CCcEEEEEEcCCCcc--cccccHHHHHHHHHh-CCCceEEEEEECccch-------------------------hhHhHc
Q psy12972 873 TTPHLILFYSDWCFA--CLQVEPIFKKLMDEL-SPLGVGFFTVHVHNEQ-------------------------GLARRL 924 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~--Ck~l~p~~~~lA~~l-~~~~v~~a~VDc~~~~-------------------------~L~~k~ 924 (1578)
.++++|.||++||++ |+...|.+.++.+.+ ++.++.+..|+++..+ .+++.|
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 112 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQY 112 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHT
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHc
Confidence 579999999999999 999999999999999 7777999999988654 789999
Q ss_pred CccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 925 GVGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 925 gV~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|.+ +|+++++ ++|+....+ .+.+++.+.+++.+
T Consensus 113 ~v~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 113 SIYK-IPANILLSSDGKILAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp TCCS-SSEEEEECTTSBEEEES---CCHHHHHHHHHHHH
T ss_pred CCCc-cCeEEEECCCCEEEEcc---CCHHHHHHHHHHHH
Confidence 9997 9999999 788776554 26777877776543
No 470
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.41 E-value=4.4e-07 Score=93.72 Aligned_cols=70 Identities=17% Similarity=0.325 Sum_probs=61.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 57899999999999999999999999999984 4589999988753 4799999999
Q ss_pred ccCCcEEEEc--CCcccc
Q psy12972 928 SQLPQIALLT--DGRTSF 943 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~ 943 (1578)
+ +||++++. +|+.+.
T Consensus 108 ~-~Pt~~lid~~~G~i~~ 124 (146)
T 1o8x_A 108 S-IPTLIGVDADSGDVVT 124 (146)
T ss_dssp S-SSEEEEEETTTCCEEE
T ss_pred C-CCEEEEEECCCCeEEE
Confidence 7 99999996 777654
No 471
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.41 E-value=2.9e-07 Score=109.72 Aligned_cols=89 Identities=17% Similarity=0.171 Sum_probs=78.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECcc---------------------------chhhHhHcC
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHN---------------------------EQGLARRLG 925 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~---------------------------~~~L~~k~g 925 (1578)
.++++|.||++||++|+...|.+.++++++++.++.+..|+++. +..+++.|+
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~yg 161 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYR 161 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTT
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcC
Confidence 67999999999999999999999999999987679999998752 357999999
Q ss_pred ccccCCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 926 VGSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 926 V~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
|.+ +|+++++ ++|++...+.|..+.++|.++|++.+
T Consensus 162 V~~-~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 162 NRY-WPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp CCE-ESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHH
T ss_pred CCc-cCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 998 9998888 88988777778888999999987665
No 472
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.39 E-value=9e-08 Score=94.52 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=52.9
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|++.+ ++++++|.||||||++|+++.|.|+++++.+++ ++.++.++.+. +++..+
T Consensus 5 ~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~~~~l~~~~~----------- 68 (112)
T 2voc_A 5 KATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDENQETAGKYG----------- 68 (112)
T ss_dssp ECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTTCCSHHHHTT-----------
T ss_pred EecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHcC-----------
Confidence 45667788777 578999999999999999999999999999975 34444443332 333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
+...|++.++.+|
T Consensus 69 --v~~~Pt~~~~~~G 81 (112)
T 2voc_A 69 --VMSIPTLLVLKDG 81 (112)
T ss_dssp --CCSBSEEEEEETT
T ss_pred --CCcccEEEEEeCC
Confidence 3344888777544
No 473
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.39 E-value=7.1e-07 Score=96.14 Aligned_cols=91 Identities=13% Similarity=0.313 Sum_probs=75.0
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc-----hhhHhHcCcc--------------------
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE-----QGLARRLGVG-------------------- 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~-----~~L~~k~gV~-------------------- 927 (1578)
.++++|.||++||++|+...|.+.++.+.+++.++.+..|+++.+ ...++++++.
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 578999999999999999999999999999866799999998765 4567777774
Q ss_pred ---ccCCcEEEE-cCCccccccCCCCC--HHHHHHHHHhhCCC
Q psy12972 928 ---SQLPQIALL-TDGRTSFFKEPSFS--VQKMVEFFRLKLPY 964 (1578)
Q Consensus 928 ---~~~PTl~lf-~~G~~~~y~~G~~s--~~~L~~fi~~~lp~ 964 (1578)
+ +|+++++ ++|+....+.|..+ .+++.+++++.+..
T Consensus 140 ~~~~-~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 140 RALG-MPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp CCSS-SSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred ccCC-CCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 6 9999988 78887766667654 68899999877643
No 474
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.38 E-value=4e-07 Score=93.55 Aligned_cols=71 Identities=15% Similarity=0.395 Sum_probs=61.1
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
+++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.+ ..++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVE 107 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCC
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCC
Confidence 57899999999999999999999999999983 4588999988763 4689999999
Q ss_pred ccCCcEEEEc--CCccccc
Q psy12972 928 SQLPQIALLT--DGRTSFF 944 (1578)
Q Consensus 928 ~~~PTl~lf~--~G~~~~y 944 (1578)
+ +||++++. +|+....
T Consensus 108 ~-~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 108 S-IPTLITINADTGAIIGT 125 (144)
T ss_dssp S-SSEEEEEETTTCCEEES
T ss_pred C-CCEEEEEECCCCeEEec
Confidence 7 99999997 7766543
No 475
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.37 E-value=4.7e-07 Score=96.15 Aligned_cols=70 Identities=20% Similarity=0.421 Sum_probs=61.4
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCC-CceEEEEEECccc------------------------hhhHhHcCcc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSP-LGVGFFTVHVHNE------------------------QGLARRLGVG 927 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~-~~v~~a~VDc~~~------------------------~~L~~k~gV~ 927 (1578)
.++++|.||++||++|+...|.+.++++.+++ .++.+..|+++.. ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 57899999999999999999999999999986 4688999988766 6899999999
Q ss_pred ccCCcEEEEc-C-Ccccc
Q psy12972 928 SQLPQIALLT-D-GRTSF 943 (1578)
Q Consensus 928 ~~~PTl~lf~-~-G~~~~ 943 (1578)
+ +||++++. + |+.+.
T Consensus 128 ~-~Pt~~lid~~~G~iv~ 144 (165)
T 3s9f_A 128 S-IPTLIGLNADTGDTVT 144 (165)
T ss_dssp S-SSEEEEEETTTCCEEE
T ss_pred C-CCEEEEEeCCCCEEEe
Confidence 7 99999996 4 76554
No 476
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.37 E-value=6.9e-08 Score=95.00 Aligned_cols=75 Identities=16% Similarity=0.275 Sum_probs=50.2
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.....+++++|.||||||++|+.+.|.|+++++.++..++.++.++.+. ++...++ .
T Consensus 9 ~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v-------------~ 75 (112)
T 3d6i_A 9 EQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEI-------------S 75 (112)
T ss_dssp HHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTC-------------C
T ss_pred HHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCC-------------C
Confidence 46666664335688999999999999999999999999999754445555444432 3333333 3
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.++.+|
T Consensus 76 ~~Pt~~~~~~G 86 (112)
T 3d6i_A 76 AVPYFIIIHKG 86 (112)
T ss_dssp SSSEEEEEETT
T ss_pred cccEEEEEECC
Confidence 44887776544
No 477
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.37 E-value=1.4e-06 Score=91.03 Aligned_cols=131 Identities=11% Similarity=0.109 Sum_probs=90.3
Q ss_pred hhcCCCCCCcccCchhhhhhcCCCCceEEEEEec-CCcchHHHHHHHHHHHhhccCCCCcEEEEEEec--CcchHHHHhc
Q psy12972 1070 TDNNPYLTLPRISSQSMLDAVCPVKKLCVVLFSE-DSPEHDASRHTLRRFAQESRFVHNNIAFMYVFI--EKQPEFVNAL 1146 (1578)
Q Consensus 1070 I~~nk~p~vpeLts~~~~~~~c~~~~lcVll~~~-~~~~~~~~~~~lr~vA~~~~~~~~~v~F~~vd~--~~q~~~~~~f 1146 (1578)
+..|++|+++++|..+........-.+.++++.. ++.+.+.+...++++|++ |+++ +.|+++|. +.+...++.|
T Consensus 8 ~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~--fkgk-i~Fv~vd~~~~~~~~~l~~f 84 (147)
T 3bj5_A 8 MKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAES--FKGK-ILFAFIDSDHTDNQRILEFF 84 (147)
T ss_dssp -------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHT--TTTT-CEEEEECTTCGGGHHHHHHT
T ss_pred hhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHH--cCCc-eEEEEEecchHhHHHHHHHc
Confidence 5678999999999888755542111344444543 345578899999999999 9887 89999998 6666777877
Q ss_pred cCCCCCCccccceeEEEEEcC--CcceEeeccCCcccccccccccHHHHHHHhhhhhcCCcccccccccccccccchhhh
Q psy12972 1147 TSPEDSSEISLHIAAMWRMDY--KKIKYGWLLGDAVDDWKDYNTTKDRLDAGLRSLVNDPYNNLLYDTALKEISDEYIQS 1224 (1578)
Q Consensus 1147 ~~~~~~~~~~~~lp~l~~~n~--~~~kY~~l~~~~~~~~~~~~~t~e~l~~fL~~ll~g~~~~l~~~~~lp~l~dE~~~~ 1224 (1578)
.... .++|++.+.+. ++.+|.+..+ ++|.+.|..|++.+++|... |.+.+|..|.
T Consensus 85 Gl~~------~~~P~v~i~~~~~~~~Ky~~~~~---------~~t~~~i~~Fv~d~l~GkL~--------p~~KSEpiPe 141 (147)
T 3bj5_A 85 GLKK------EECPAVRLITLEEEMTKYKPESE---------ELTAERITEFCHRFLEGKIK--------PHLMSQELPE 141 (147)
T ss_dssp TCCG------GGCSEEEEEECSSSCEEECCSCC---------CCCHHHHHHHHHHHHTTCSC--------EEECCSCCCG
T ss_pred CCCc------ccCCEEEEEecccccccCCCCcc---------cCCHHHHHHHHHHHHcCCcc--------ccccCCCCCC
Confidence 3222 36888877875 3478864323 36789999999999999998 7777777776
Q ss_pred hH
Q psy12972 1225 LG 1226 (1578)
Q Consensus 1225 ~~ 1226 (1578)
.|
T Consensus 142 ~w 143 (147)
T 3bj5_A 142 DW 143 (147)
T ss_dssp GG
T ss_pred Cc
Confidence 54
No 478
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.36 E-value=1e-07 Score=97.91 Aligned_cols=76 Identities=25% Similarity=0.398 Sum_probs=52.9
Q ss_pred ccccccccccccCCc---------cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 749 STTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~---------~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
.++..+|+..+...+ .+++++|.||||||++|+.+.|.|+++++.+.+. +.++.++++. ++...++.
T Consensus 26 ~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~ 104 (141)
T 3hxs_A 26 HLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDKEPELARDFGIQ 104 (141)
T ss_dssp ECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTCC
T ss_pred cccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCCCHHHHHHcCCC
Confidence 345556666665433 5789999999999999999999999999999853 3343333332 34444443
Q ss_pred CCccccccccccccCccccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVFS 838 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf~ 838 (1578)
..|++.++.
T Consensus 105 -------------~~Pt~~~~~ 113 (141)
T 3hxs_A 105 -------------SIPTIWFVP 113 (141)
T ss_dssp -------------SSSEEEEEC
T ss_pred -------------CcCEEEEEe
Confidence 448887774
No 479
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.34 E-value=9.9e-08 Score=92.44 Aligned_cols=74 Identities=19% Similarity=0.335 Sum_probs=53.5
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+ ++++++|.||||||++|+.+.|.|+++++.+++. +.++.++.+. +++..++
T Consensus 7 ~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v---------- 71 (106)
T 3die_A 7 KVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDENPSTAAKYEV---------- 71 (106)
T ss_dssp ECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC----------
T ss_pred ECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCcCHHHHHhCCC----------
Confidence 45667788877 6789999999999999999999999999999864 3333333332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...|++.++.+|
T Consensus 72 ---~~~Pt~~~~~~G 83 (106)
T 3die_A 72 ---MSIPTLIVFKDG 83 (106)
T ss_dssp ---CSBSEEEEEETT
T ss_pred ---cccCEEEEEeCC
Confidence 334888777644
No 480
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.33 E-value=8.6e-07 Score=91.20 Aligned_cols=83 Identities=10% Similarity=0.184 Sum_probs=67.9
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEECccc--------------------------hhhHhHcCc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHVHNE--------------------------QGLARRLGV 926 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc~~~--------------------------~~L~~k~gV 926 (1578)
.++++|.||++||++|+...|.+.++.+.+++.++.+..|+++.+ ..+++.|+|
T Consensus 32 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 32 GRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 578999999999999999999999999999877799999988743 257889999
Q ss_pred cccCCcEEEE-cCCccccccCCCCCHHHHHHHHH
Q psy12972 927 GSQLPQIALL-TDGRTSFFKEPSFSVQKMVEFFR 959 (1578)
Q Consensus 927 ~~~~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~ 959 (1578)
.+ +|+.+++ ++|+..... ...+++.++++
T Consensus 112 ~~-~P~~~lid~~G~i~~~~---~~~~~l~~~l~ 141 (143)
T 4fo5_A 112 RK-GFKNFLINDEGVIIAAN---VTPEKLTEILK 141 (143)
T ss_dssp GG-CCCEEEECTTSBEEEES---CCHHHHHHHHT
T ss_pred CC-CCcEEEECCCCEEEEcc---CCHHHHHHHHH
Confidence 97 9998888 478765543 34567776664
No 481
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.33 E-value=9.3e-07 Score=95.45 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=73.2
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC-----------------------------ccchhhHhH
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------------HNEQGLARR 923 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----------------------------~~~~~L~~k 923 (1578)
.++++|.||++||++|+...|.++++.+++.+. +.+..|++ +.+.++++.
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 589999999999999999999999999999887 99999998 335679999
Q ss_pred cCccccCCcEEEE-cCCccccc--------cCCCCCHHHHHHHHHhhCC
Q psy12972 924 LGVGSQLPQIALL-TDGRTSFF--------KEPSFSVQKMVEFFRLKLP 963 (1578)
Q Consensus 924 ~gV~~~~PTl~lf-~~G~~~~y--------~~G~~s~~~L~~fi~~~lp 963 (1578)
|+|.+ +|+++++ ++|+.... +.|..+.++|.+.|++.+.
T Consensus 112 ~~v~~-~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YRALR-TPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TTCCE-ESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cCCCC-CCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 99997 9999998 67876543 1123367788888877653
No 482
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.33 E-value=8.8e-08 Score=93.73 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=54.3
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|+..+.. ++++++|.||||||++|+.+.|.|+++++.+.+. +.++.++.+. ++...++
T Consensus 7 ~~l~~~~~~~~~~~--~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v--------- 74 (111)
T 3gnj_A 7 EKLDTNTFEQLIYD--EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES-FGFYYVDVEEEKTLFQRFSL--------- 74 (111)
T ss_dssp EECCHHHHHHHHTT--SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTTCHHHHHHTTC---------
T ss_pred eecCHHHHHHHHHh--cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-eEEEEEECCcChhHHHhcCC---------
Confidence 34566678887743 4689999999999999999999999999999862 3333333332 3333343
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
...|++.+|.+|
T Consensus 75 ----~~~Pt~~~~~~g 86 (111)
T 3gnj_A 75 ----KGVPQILYFKDG 86 (111)
T ss_dssp ----CSSCEEEEEETT
T ss_pred ----CcCCEEEEEECC
Confidence 344888777654
No 483
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=8.3e-08 Score=97.27 Aligned_cols=77 Identities=23% Similarity=0.416 Sum_probs=53.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcC---CCcceeeeeecc---cCccccccCCcccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSP---LGVGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~---~~vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
.++..+|+..+.. ++++++|.||||||++|+++.|.|+++++.+++ ..+.++.++.+. +|...++
T Consensus 11 ~l~~~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v------- 81 (133)
T 1x5d_A 11 ELTDDSFDKNVLD--SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGI------- 81 (133)
T ss_dssp ECCTTHHHHHTTT--SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTC-------
T ss_pred EcCHhhHHHHHhc--CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCC-------
Confidence 4556678877753 468999999999999999999999999999972 234444333332 3333333
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
..+|++.+|..|
T Consensus 82 ------~~~Pt~~~~~~g 93 (133)
T 1x5d_A 82 ------RGFPTIKIFQKG 93 (133)
T ss_dssp ------CSSSEEEEEETT
T ss_pred ------CeeCeEEEEeCC
Confidence 344888777654
No 484
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.32 E-value=1.3e-07 Score=96.95 Aligned_cols=77 Identities=18% Similarity=0.321 Sum_probs=54.2
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCC--cceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLG--VGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~--vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|+..+. .+++++|.|||+||++|+++.|.|+++++.+++.+ +.++.++.+. +|...+
T Consensus 20 ~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~-------- 88 (140)
T 2dj1_A 20 WVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFD-------- 88 (140)
T ss_dssp EECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTT--------
T ss_pred EEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCC--------
Confidence 3456677887663 46899999999999999999999999999998753 4444443322 333333
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
+..+|++.+|..|
T Consensus 89 -----v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 89 -----VSGYPTIKILKKG 101 (140)
T ss_dssp -----CCSSSEEEEEETT
T ss_pred -----CCccCeEEEEECC
Confidence 3445888777544
No 485
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.32 E-value=9.2e-08 Score=95.60 Aligned_cols=76 Identities=20% Similarity=0.302 Sum_probs=53.3
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|.+.+.. ++++++|.||||||++|+++.|.|+++++.+++ ++.++.++.+. +|...++
T Consensus 7 ~l~~~~f~~~~~~--~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v---------- 73 (122)
T 3aps_A 7 DLTPQTFNEKVLQ--GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQAYPQTCQKAGI---------- 73 (122)
T ss_dssp ECCHHHHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTTCHHHHHHTTC----------
T ss_pred cCCHHHHHHHHhc--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcCCHHHHHHcCC----------
Confidence 4556677766653 578999999999999999999999999999985 34444333332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.++..+
T Consensus 74 ---~~~Pt~~~~~~~ 85 (122)
T 3aps_A 74 ---KAYPSVKLYQYE 85 (122)
T ss_dssp ---CSSSEEEEEEEE
T ss_pred ---CccceEEEEeCC
Confidence 344888777543
No 486
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.32 E-value=5.8e-07 Score=96.45 Aligned_cols=85 Identities=20% Similarity=0.353 Sum_probs=71.4
Q ss_pred CCcEEEEEEcCCCcccccccHHHHHHHHHhCCCceEEEEEEC-----------------------ccchhhHhHcCcccc
Q psy12972 873 TTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHV-----------------------HNEQGLARRLGVGSQ 929 (1578)
Q Consensus 873 ~~~~LV~FyapwCg~Ck~l~p~~~~lA~~l~~~~v~~a~VDc-----------------------~~~~~L~~k~gV~~~ 929 (1578)
.++++|.||++||++|+...|.++++++. ++.+..|++ +.+..+++.|+|.+
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~- 132 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYG- 132 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCS-
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCC-
Confidence 57999999999999999999999999886 477777774 34567899999997
Q ss_pred CCcEEEE-cCCccccccCCCCCHHHHHHHHHhhC
Q psy12972 930 LPQIALL-TDGRTSFFKEPSFSVQKMVEFFRLKL 962 (1578)
Q Consensus 930 ~PTl~lf-~~G~~~~y~~G~~s~~~L~~fi~~~l 962 (1578)
+|+.+++ ++|+....+.|..+.+.+.+++.+.+
T Consensus 133 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 133 APETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp SCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 9987777 78888777778889999988887655
No 487
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.32 E-value=1.6e-07 Score=92.96 Aligned_cols=76 Identities=20% Similarity=0.315 Sum_probs=53.4
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.++..+|+..+ .++++++|.||||||++|+++.|.|+++++.+++. .+.++.++.+. +|...
T Consensus 11 ~l~~~~~~~~~---~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~---------- 77 (120)
T 1mek_A 11 VLRKSNFAEAL---AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQY---------- 77 (120)
T ss_dssp ECCTTTHHHHH---HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHH----------
T ss_pred EechhhHHHHH---ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHC----------
Confidence 45566777665 35789999999999999999999999999999864 34444443322 22333
Q ss_pred cccccccCccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~ 840 (1578)
++...|++.++.+|
T Consensus 78 ---~v~~~Pt~~~~~~g 91 (120)
T 1mek_A 78 ---GVRGYPTIKFFRNG 91 (120)
T ss_dssp ---TCCSSSEEEEEESS
T ss_pred ---CCCcccEEEEEeCC
Confidence 34445888887655
No 488
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.32 E-value=1e-07 Score=102.42 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=59.6
Q ss_pred ccccccccccccccCCccCccceecccc-------ccccccccchHHHHHHHHHhcC----CCcceeeeeecc---cCcc
Q psy12972 747 KLSTTHWNFEKNYIPKSYTTPHLILFYS-------DWCFACLQVEPIFKKLMDELSP----LGVGFFTVHYDL---FGTT 812 (1578)
Q Consensus 747 k~~l~~~nf~~~v~~~~~~~~~lV~FYA-------pwCghCk~LaP~weklA~~Lk~----~~vg~v~~~~~~---~~~~ 812 (1578)
.+.+++.||++.+ ....+.+++|.|+| +|||+|+.++|+|+++|+++.+ ..+.++.++++. +++.
T Consensus 20 vi~lt~~nF~~~v-~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~ 98 (178)
T 3ga4_A 20 VITVTADNYPLLS-RGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKD 98 (178)
T ss_dssp EEECCTTTHHHHT-TCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHH
T ss_pred CEECCHHHHHHHH-cccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHH
Confidence 3467888999766 34457789999999 4999999999999999999962 234455555443 4455
Q ss_pred ccccCCccccccccccccCcccccccccc
Q psy12972 813 DGFSGQDSASRNFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 813 ~~i~g~~~~~~~~~~i~~~Ptiklf~~~~ 841 (1578)
.++++. ||+.+|+.|.
T Consensus 99 ~~I~si-------------Ptl~~F~~g~ 114 (178)
T 3ga4_A 99 LKLQNV-------------PHLVVYPPAE 114 (178)
T ss_dssp TTCCSS-------------CEEEEECCCC
T ss_pred cCCCCC-------------CEEEEEcCCC
Confidence 555544 9999999774
No 489
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.31 E-value=6.7e-08 Score=94.37 Aligned_cols=72 Identities=17% Similarity=0.281 Sum_probs=49.7
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccccccc
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNFHNHM 829 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~~~i~ 829 (1578)
.+|++.+.. .++++++|.||||||++|+++.|.|+++++.+.+ +.++.++.+. ++...+ +.
T Consensus 10 ~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~~~~~~~~~~-------------v~ 73 (107)
T 1gh2_A 10 PDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQ--AVFLEVDVHQCQGTAATNN-------------IS 73 (107)
T ss_dssp GGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTT--SEEEEEETTTSHHHHHHTT-------------CC
T ss_pred HHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCC--cEEEEEECccCHHHHHhcC-------------CC
Confidence 466665532 4678999999999999999999999999999853 3343333332 333333 34
Q ss_pred cCccccccccc
Q psy12972 830 YNPFDDVFSEG 840 (1578)
Q Consensus 830 ~~Ptiklf~~~ 840 (1578)
..||+.++.+|
T Consensus 74 ~~Pt~~~~~~G 84 (107)
T 1gh2_A 74 ATPTFQFFRNK 84 (107)
T ss_dssp SSSEEEEEETT
T ss_pred cccEEEEEECC
Confidence 44888777654
No 490
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.30 E-value=7.3e-08 Score=94.85 Aligned_cols=72 Identities=18% Similarity=0.333 Sum_probs=49.6
Q ss_pred ccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc-cCccccccCCccccccccccccC
Q psy12972 753 WNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL-FGTTDGFSGQDSASRNFHNHMYN 831 (1578)
Q Consensus 753 ~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~-~~~~~~i~g~~~~~~~~~~i~~~ 831 (1578)
.+|+..+ .++++++|.||||||++|+++.|.|+++++.+.+..+..+++.... ++...++. ..
T Consensus 15 ~~f~~~~---~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~-------------~~ 78 (109)
T 3f3q_A 15 SEFDSAI---AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVS-------------AM 78 (109)
T ss_dssp HHHHHHT---TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCC-------------SS
T ss_pred HHHHHHH---hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCC-------------cc
Confidence 4566665 3478999999999999999999999999999976443333332111 33333443 44
Q ss_pred ccccccccc
Q psy12972 832 PFDDVFSEG 840 (1578)
Q Consensus 832 Ptiklf~~~ 840 (1578)
||+.++..|
T Consensus 79 Pt~~~~~~G 87 (109)
T 3f3q_A 79 PTLLLFKNG 87 (109)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEECC
Confidence 888777644
No 491
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.30 E-value=8.7e-08 Score=93.66 Aligned_cols=76 Identities=25% Similarity=0.394 Sum_probs=54.5
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCC--Ccceeeeeecc---cCccccccCCcccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPL--GVGFFTVHYDL---FGTTDGFSGQDSAS 822 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~--~vg~v~~~~~~---~~~~~~i~g~~~~~ 822 (1578)
..++..+|++.+. +++++|.||||||++|+++.|.|+++++.+.+. ++.++.++.+. +|...++
T Consensus 8 ~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v------- 76 (111)
T 3uvt_A 8 LALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSV------- 76 (111)
T ss_dssp EECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTC-------
T ss_pred eEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCC-------
Confidence 4566678888874 679999999999999999999999999998654 44444443332 3444444
Q ss_pred ccccccccCccccccccc
Q psy12972 823 RNFHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 823 ~~~~~i~~~Ptiklf~~~ 840 (1578)
...|++.++..|
T Consensus 77 ------~~~Pt~~~~~~g 88 (111)
T 3uvt_A 77 ------RGYPTLLLFRGG 88 (111)
T ss_dssp ------CSSSEEEEEETT
T ss_pred ------CcccEEEEEeCC
Confidence 344888777654
No 492
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.29 E-value=2.3e-07 Score=94.25 Aligned_cols=76 Identities=20% Similarity=0.351 Sum_probs=53.8
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. +++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. +++..++
T Consensus 26 ~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v---------- 92 (128)
T 2o8v_B 26 HLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGI---------- 92 (128)
T ss_dssp EECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTTCCTTSGGGTC----------
T ss_pred ecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCCCHHHHHHcCC----------
Confidence 456678887764 46789999999999999999999999999999753 4343333332 3344333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.++.+|
T Consensus 93 ---~~~Pt~~~~~~G 104 (128)
T 2o8v_B 93 ---RGIPTLLLFKNG 104 (128)
T ss_dssp ---CSSSEEEEEETT
T ss_pred ---CccCEEEEEeCC
Confidence 344888777544
No 493
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.28 E-value=1.3e-06 Score=101.24 Aligned_cols=96 Identities=16% Similarity=0.062 Sum_probs=73.5
Q ss_pred hHHHHHHHHhCCChhhhccccCCcccccccceEEEEEEecCCCEEEEEEecchhhhhHHHHHHHHHHHHHHHhhhCCCCC
Q psy12972 386 EVDQLFLEDFGCTHSQLFRSFDENPIAAASLAQVFRAVTKEGVEVAVKVQYIDLRERFVGDIATVQTLLRIAGFLYPKFD 465 (1578)
Q Consensus 386 ~v~~~~~~~lG~~~~~iF~~fd~~PlasaSiaQVhrA~l~~G~~VAVKVq~P~i~~~~~~Dl~~l~~l~~~~~~~~~~~~ 465 (1578)
.|.+.+.+.+|.++..+ +++|.|..++||+.++.||+.|+||+..++.... .
T Consensus 4 ~v~a~~~~l~G~~v~~v------~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~---------------------~- 55 (288)
T 3f7w_A 4 SVAARVTELTGREVAAV------AERGHSHRWHLYRVELADGTPLFVKALPDDAPAL---------------------D- 55 (288)
T ss_dssp HHHHHHHHHHCCCEEEE------EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC---------------------T-
T ss_pred HHHHHHHHhcCCCeEEE------EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch---------------------h-
Confidence 45566778899887665 8999999999999999999999999876553210 0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhCCCCCeeecEEeeCCCCceEEEEeccCCCcCCc
Q psy12972 466 FQWVINELKVPLEQELDFLNEGRNAERCSKDLAHLPYVYIPRILWDKSSTRVLTTEFIDGVKISD 530 (1578)
Q Consensus 466 ~~~~~~e~~~~l~~ElDf~~Ea~n~~r~~~~~~~~~~v~vP~v~~~~~t~~VLVME~i~G~~l~d 530 (1578)
-.|+.|++.++.+++ ...|.||+++. .....++|||++|.....
T Consensus 56 ---------------~~~~~Ea~~L~~L~~----~~~vpvP~v~~--~~~~~lv~e~l~~~~~~~ 99 (288)
T 3f7w_A 56 ---------------GLFRAEALGLDWLGR----SFGSPVPQVAG--WDDRTLAMEWVDERPPTP 99 (288)
T ss_dssp ---------------THHHHHHHHHHHHTC----STTCCSCCEEE--EETTEEEEECCCCCCCCH
T ss_pred ---------------hHHHHHHHHHHHHHh----hCCCCcceEEe--ccCceEEEEeecccCCCh
Confidence 014678888877753 34588999985 356789999999887764
No 494
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.28 E-value=1.4e-07 Score=96.81 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=59.5
Q ss_pred ccccccccccccCCccCccceeccccccc--cccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWC--FACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwC--ghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.+++.||+..+. +++++++|.|||+|| |+|+.++|..+++++++.+. +.++.++++. ++..+++.+.
T Consensus 19 ~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe~~~la~~ygV~si----- 90 (137)
T 2qsi_A 19 LVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEAERGLMARFGVAVC----- 90 (137)
T ss_dssp EECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGGHHHHHHHHTCCSS-----
T ss_pred ccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCCCHHHHHHcCCccC-----
Confidence 456678888884 345699999999999 99999999999999999753 4455555554 5566666655
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|++|-
T Consensus 91 --------PTlilFkdG~ 100 (137)
T 2qsi_A 91 --------PSLAVVQPER 100 (137)
T ss_dssp --------SEEEEEECCE
T ss_pred --------CEEEEEECCE
Confidence 9999999774
No 495
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.27 E-value=1.1e-07 Score=97.87 Aligned_cols=77 Identities=14% Similarity=0.119 Sum_probs=61.1
Q ss_pred ccccccccccccCCccCccceecccccc--ccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDW--CFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASR 823 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApw--CghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~ 823 (1578)
.+++.+|++.+ .+++++||.|||+| ||+|+.++|..+++|+++.+..+.++.+++|. ++..+++.+.
T Consensus 21 ~~t~~~F~~~v---~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sI----- 92 (140)
T 2qgv_A 21 PVSESRLDDWL---TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRF----- 92 (140)
T ss_dssp ECCHHHHHHHH---HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSS-----
T ss_pred cCCHHHHHHHH---hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccC-----
Confidence 45667888888 26778999999999 99999999999999999976535555555554 5666666665
Q ss_pred cccccccCcccccccccc
Q psy12972 824 NFHNHMYNPFDDVFSEGF 841 (1578)
Q Consensus 824 ~~~~i~~~Ptiklf~~~~ 841 (1578)
||+.+|++|-
T Consensus 93 --------PTlilFk~G~ 102 (140)
T 2qgv_A 93 --------PATLVFTGGN 102 (140)
T ss_dssp --------SEEEEEETTE
T ss_pred --------CEEEEEECCE
Confidence 9999999774
No 496
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.27 E-value=1.5e-07 Score=94.77 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=52.1
Q ss_pred cccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCcccccc
Q psy12972 748 LSTTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRN 824 (1578)
Q Consensus 748 ~~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~ 824 (1578)
..++..+|++.+. +.++|.||||||++|+++.|.|+++++.+++.++.++.++++. ++...++
T Consensus 10 ~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v--------- 75 (126)
T 1x5e_A 10 RVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFII--------- 75 (126)
T ss_dssp EECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTC---------
T ss_pred EEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCC---------
Confidence 3456677876552 2399999999999999999999999999986445454444332 3333333
Q ss_pred ccccccCccccccccc
Q psy12972 825 FHNHMYNPFDDVFSEG 840 (1578)
Q Consensus 825 ~~~i~~~Ptiklf~~~ 840 (1578)
...||+.++.+|
T Consensus 76 ----~~~Pt~~~~~~G 87 (126)
T 1x5e_A 76 ----NALPTIYHCKDG 87 (126)
T ss_dssp ----CSSSEEEEEETT
T ss_pred ----cccCEEEEEeCC
Confidence 344888777554
No 497
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.27 E-value=1.7e-07 Score=96.02 Aligned_cols=75 Identities=23% Similarity=0.361 Sum_probs=52.3
Q ss_pred ccccccccccccCCc---------cCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCcccccc
Q psy12972 749 STTHWNFEKNYIPKS---------YTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFS 816 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~---------~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~ 816 (1578)
.++..+|.+.+...+ ++++++|.||||||++|+++.|.|+++++.+++. +.++.++++. ++...++
T Consensus 13 ~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~~~~l~~~~~v- 90 (136)
T 2l5l_A 13 HLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEKEQELAGAFGI- 90 (136)
T ss_dssp EECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC-
T ss_pred EecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHcCC-
Confidence 455667777775432 5789999999999999999999999999999753 3333333322 3333333
Q ss_pred CCccccccccccccCcccccc
Q psy12972 817 GQDSASRNFHNHMYNPFDDVF 837 (1578)
Q Consensus 817 g~~~~~~~~~~i~~~Ptiklf 837 (1578)
...|++.++
T Consensus 91 ------------~~~Pt~~~~ 99 (136)
T 2l5l_A 91 ------------RSIPSILFI 99 (136)
T ss_dssp ------------CSSCEEEEE
T ss_pred ------------CCCCEEEEE
Confidence 344888777
No 498
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.26 E-value=2e-07 Score=91.55 Aligned_cols=76 Identities=24% Similarity=0.479 Sum_probs=53.5
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|...+.. ++++++|.||||||++|+++.|.|+++++.+++. +.++.++.+. ++...++
T Consensus 9 ~l~~~~~~~~~~~--~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v---------- 75 (112)
T 1t00_A 9 HVTDDSFEQDVLK--NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDENPGTAAKYGV---------- 75 (112)
T ss_dssp EECTTTHHHHTTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCHHHHHHTTC----------
T ss_pred ecchhhHHHHHhh--CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCCCHHHHHhCCC----------
Confidence 4566678777753 5789999999999999999999999999999653 4444443332 3333333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...|++.++.+|
T Consensus 76 ---~~~Pt~~~~~~G 87 (112)
T 1t00_A 76 ---MSIPTLNVYQGG 87 (112)
T ss_dssp ---CSSSEEEEEETT
T ss_pred ---CcccEEEEEeCC
Confidence 344887666544
No 499
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.26 E-value=2.5e-07 Score=103.27 Aligned_cols=76 Identities=21% Similarity=0.396 Sum_probs=54.7
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+++ ++++++|.||||||++|+.+.|.|+++++.+++. +.++.++++. +|...++
T Consensus 16 ~lt~~~f~~~v~~--~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~~~~l~~~~~v---------- 82 (222)
T 3dxb_A 16 HLTDDSFDTDVLK--ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYGI---------- 82 (222)
T ss_dssp ECCTTTHHHHHTT--CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTTCTTTGGGGTC----------
T ss_pred eCCHHHHHHHHHh--cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCCCHHHHHHcCC----------
Confidence 4666788887654 6789999999999999999999999999999864 3333333332 3344333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
...||+.+++.|
T Consensus 83 ---~~~Pt~~~~~~G 94 (222)
T 3dxb_A 83 ---RGIPTLLLFKNG 94 (222)
T ss_dssp ---CSBSEEEEEETT
T ss_pred ---CcCCEEEEEECC
Confidence 344888777644
No 500
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.26 E-value=2.1e-07 Score=90.72 Aligned_cols=76 Identities=21% Similarity=0.385 Sum_probs=53.2
Q ss_pred ccccccccccccCCccCccceeccccccccccccchHHHHHHHHHhcCCCcceeeeeecc---cCccccccCCccccccc
Q psy12972 749 STTHWNFEKNYIPKSYTTPHLILFYSDWCFACLQVEPIFKKLMDELSPLGVGFFTVHYDL---FGTTDGFSGQDSASRNF 825 (1578)
Q Consensus 749 ~l~~~nf~~~v~~~~~~~~~lV~FYApwCghCk~LaP~weklA~~Lk~~~vg~v~~~~~~---~~~~~~i~g~~~~~~~~ 825 (1578)
.++..+|+..+. +++++++|.||||||++|+.+.|.++++++.+++. +.++.++.+. +++..+
T Consensus 6 ~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~----------- 71 (108)
T 2trx_A 6 HLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQNPGTAPKYG----------- 71 (108)
T ss_dssp ECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTTCTTHHHHTT-----------
T ss_pred ecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCCCHHHHHHcC-----------
Confidence 456667887764 46789999999999999999999999999998753 4443333322 233333
Q ss_pred cccccCccccccccc
Q psy12972 826 HNHMYNPFDDVFSEG 840 (1578)
Q Consensus 826 ~~i~~~Ptiklf~~~ 840 (1578)
+...|++.++.+|
T Consensus 72 --v~~~Pt~~~~~~G 84 (108)
T 2trx_A 72 --IRGIPTLLLFKNG 84 (108)
T ss_dssp --CCSSSEEEEEETT
T ss_pred --CcccCEEEEEeCC
Confidence 3444888777544
Done!