BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12977
(226 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307167458|gb|EFN61031.1| Probable ATP-dependent RNA helicase DDX52 [Camponotus floridanus]
Length = 498
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 144/178 (80%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTAAFL+PIIHSLRGP+ GFRAVI+ PTRELAKQTY E ++LS+G
Sbjct: 108 GRQILACAPTGSGKTAAFLVPIIHSLRGPQKKGFRAVILSPTRELAKQTYRECLKLSDGY 167
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+IGKI QA K+GP S+QKFD+LITTP +LV+LL DPPA++L NVEWLIVDE+D
Sbjct: 168 DFRIHIIGKINQALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEAD 227
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+RGFR+QL I AC+ NL RGMFSAT+T V+KWCRR +K + + VG R
Sbjct: 228 KLFEEGIRGFREQLDEITRACTNTNLHRGMFSATNTPAVSKWCRRNMKGLITVTVGHR 285
>gi|322780454|gb|EFZ09942.1| hypothetical protein SINV_14078 [Solenopsis invicta]
Length = 377
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/178 (67%), Positives = 142/178 (79%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTAAFL+PIIHSLRGP+ GFRAVI+ PTRELAKQTY E +RLS+G
Sbjct: 170 GRQILACAPTGSGKTAAFLLPIIHSLRGPQKKGFRAVILSPTRELAKQTYRECLRLSDGC 229
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I K+ QA K+GP S+QKFD+LITTP +LV+LL DPPA++L NVEWLIVDE+D
Sbjct: 230 DFRIHIISKVNQALNKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEAD 289
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+RGFR+QL I AC NL RGMFSAT+T V+KWCRR +K + + VG R
Sbjct: 290 KLFEEGIRGFREQLDEITRACVNTNLHRGMFSATNTPAVSKWCRRNMKGLITVTVGQR 347
>gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Nasonia
vitripennis]
Length = 643
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 141/178 (79%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTA+FL+PIIH L GP+ GFRA+I+ PTRELAKQTY E +RLSEG
Sbjct: 175 GRQILACAPTGSGKTASFLLPIIHQLNGPRKKGFRAIILSPTRELAKQTYRECIRLSEGR 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I KI QA K+GP+S+QKFD+LITTP +LV+LL +PPA++L NVEWLIVDE+D
Sbjct: 235 GFRVHIISKINQALTKYGPKSSQKFDILITTPKRLVFLLNQEPPAISLNNVEWLIVDEAD 294
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G RGF++QL I AC+ N++RGMFSAT+T V KWCR LK V + +G R
Sbjct: 295 KLFEEGTRGFKNQLEEISKACTNENIRRGMFSATNTPAVTKWCRHNLKGLVTVTIGQR 352
>gi|193632062|ref|XP_001950933.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Acyrthosiphon pisum]
Length = 528
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 140/177 (79%), Gaps = 1/177 (0%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
RQIFACAPTGSGKTAAFL+PIIH L P N GFRA+IV PTRELAKQT E RL EG+G
Sbjct: 92 RQIFACAPTGSGKTAAFLVPIIHHLNKPLNKGFRALIVSPTRELAKQTLRECTRLCEGIG 151
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LRAH KI + EKF P+ AQKFD+LI TPN+LV+LLQ +PPA+ L N+EWLI+DESDK
Sbjct: 152 LRAHTFTKINKDKEKFNPKLAQKFDILIATPNRLVFLLQQEPPAVELNNIEWLIIDESDK 211
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE GVRGFRDQLA+IY AC GPN KR MFSAT+T +VAKW ++ L + + VG R
Sbjct: 212 LFETGVRGFRDQLAIIYKAC-GPNAKRAMFSATYTVEVAKWSKKNLDGLIAVTVGNR 267
>gi|332020434|gb|EGI60854.1| Putative ATP-dependent RNA helicase DDX52 [Acromyrmex echinatior]
Length = 558
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/178 (65%), Positives = 140/178 (78%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTAAFL+PIIHSLR P+ GFRAVI+ PTRELAKQTY E ++LS+G
Sbjct: 169 GRQILACAPTGSGKTAAFLLPIIHSLREPQKKGFRAVILNPTRELAKQTYRECLKLSDGC 228
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I K+ QA K+GP S+QKFD+LITTP +LV+LL DPPA++L NVEWLIVDE+D
Sbjct: 229 DFRIHIISKVNQALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEAD 288
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+RGFR+QL I AC NL+ MFSAT+T V+KWCRR +K + + VG R
Sbjct: 289 KLFEEGIRGFREQLEEITKACVSTNLRCSMFSATNTPAVSKWCRRNMKGLITVTVGQR 346
>gi|383855221|ref|XP_003703115.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Megachile rotundata]
Length = 589
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
RQ+ ACAPTGSGKTAAFL+PIIH L GP+ GFRAVI+CPTRELAKQTY E +RLSEG
Sbjct: 175 SRQVLACAPTGSGKTAAFLLPIIHHLGGPQKKGFRAVILCPTRELAKQTYRECLRLSEGY 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I KI QA +GP+S+QKFD+LITTP ++++LL DPPA++ NVEWLIVDE+D
Sbjct: 235 DFRVHIISKINQALTAYGPKSSQKFDILITTPRRIIFLLSQDPPAISFKNVEWLIVDEAD 294
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G R FRDQ+ I AC+ NL+R MFSAT+T V KWCR LK V I VG R
Sbjct: 295 KLFEDGTRCFRDQMETISKACTNENLRRAMFSATNTPVVTKWCRHNLKGLVTITVGHR 352
>gi|380019489|ref|XP_003693637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis florea]
Length = 512
Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTAAFL+PIIH L GP+ GFRAVI+ PTRELAKQTY E +RLSEG
Sbjct: 117 GRQILACAPTGSGKTAAFLLPIIHHLGGPEKKGFRAVILSPTRELAKQTYRECLRLSEGY 176
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I KI QA K+GP+S+QKFD+LITTP +++YLL DPPA++ NVEWLIVDE D
Sbjct: 177 NFRIHIISKINQALNKYGPKSSQKFDILITTPKRIIYLLNQDPPAISFNNVEWLIVDEVD 236
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+R FRDQL I +C+ L + MFSAT+T V KWCRR LK + + VG R
Sbjct: 237 KLFENGIRCFRDQLEKISKSCTSEKLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHR 294
>gi|307198933|gb|EFN79685.1| Probable ATP-dependent RNA helicase DDX52 [Harpegnathos saltator]
Length = 452
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 137/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR I ACAPTGSGKTAAFL+PII SL+ P+N GFRAVI+ PTRELAKQTY E + LS+G
Sbjct: 63 GRNILACAPTGSGKTAAFLLPIICSLQKPQNKGFRAVILSPTRELAKQTYRECLSLSDGY 122
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I K QA K+GP S+QKFD+LITTP +LV+LL DPPA++L NVEWLIVDE+D
Sbjct: 123 DFRIHIINKTNQALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLKNVEWLIVDEAD 182
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+RGFR QL I AC+ NL GMFSAT+T V KWCRR +KR V + VG R
Sbjct: 183 KLFEDGIRGFRQQLDEITKACTNDNLHCGMFSATNTPVVTKWCRRNMKRLVTVTVGQR 240
>gi|242005744|ref|XP_002423722.1| predicted protein [Pediculus humanus corporis]
gi|212506907|gb|EEB10984.1| predicted protein [Pediculus humanus corporis]
Length = 1130
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 140/178 (78%), Gaps = 1/178 (0%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQ+ ACAPTGSGKTAAFL+PI + L+GP G+R VIVCPTRELA+QTY E +RLSEG
Sbjct: 789 GRQVLACAPTGSGKTAAFLVPIFYHLKGPTKKGYRCVIVCPTRELARQTYRECLRLSEGT 848
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
L+ ++I K+ E + +++KFD+LITTPN+LVYLL+ +PP +NL +VEWLIVDESD
Sbjct: 849 RLKINIIKKVTLDKENYS-NTSKKFDILITTPNRLVYLLKQEPPKVNLKSVEWLIVDESD 907
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFEAG+RGFRDQLAVIY AC +KR MFSAT T + KWCRR LK V INVG+R
Sbjct: 908 KLFEAGIRGFRDQLAVIYNACDSSVIKRAMFSATQTPHLTKWCRRNLKNLVLINVGVR 965
>gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Saccoglossus kowalevskii]
Length = 681
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 136/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGKTAAF+IP++H L+ P+ GFRAV+V PTRELA+QTY E RL+EG
Sbjct: 207 REVLACAPTGSGKTAAFIIPVLHHLKEPRKQGFRAVVVSPTRELAQQTYREFCRLAEGRS 266
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K QAA+KFGP+S+QKFD+L+TTPN+LVY+L PPALNL NVEWLIVDESDK
Sbjct: 267 FRIHIIDKTSQAAKKFGPQSSQKFDILVTTPNRLVYMLNQHPPALNLTNVEWLIVDESDK 326
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G +GFR+QLA+IY AC ++R MFSAT DV +WC+ L + +G R
Sbjct: 327 LFEEGKQGFREQLALIYKACDSMQVRRAMFSATFAYDVEQWCKLNLDNVASVTIGQR 383
>gi|328789292|ref|XP_001120427.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis mellifera]
Length = 512
Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GRQI ACAPTGSGKTAAFL+PIIH L GP+ GFRA+I+ PTRELAKQTY E +RLSEG
Sbjct: 114 GRQILACAPTGSGKTAAFLLPIIHHLGGPEKKGFRAIILSPTRELAKQTYRECLRLSEGY 173
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ H+I KI QA K+GP+S+QKFD+LITTP +++YLL DPPA++ NVEWLIVDE D
Sbjct: 174 NFKIHIISKINQALNKYGPKSSQKFDILITTPKRIIYLLNQDPPAISFNNVEWLIVDEVD 233
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+R FRDQ I +C+ L + MFSAT+T V KWCRR LK + + VG R
Sbjct: 234 KLFEDGIRCFRDQFEKISKSCTSEKLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHR 291
>gi|350418051|ref|XP_003491710.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
impatiens]
Length = 563
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKTAAFL+PIIH L GP+ GFRAVI+ PTRELAKQTY E +RLSEG
Sbjct: 171 GRNVLACAPTGSGKTAAFLLPIIHYLGGPEKKGFRAVILSPTRELAKQTYRECLRLSEGC 230
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I K+ QA K+G +S+QKFD+LITTP +++YLL DPPA++ +NVEWLIVDE D
Sbjct: 231 NFRVHIISKVNQALNKYGLKSSQKFDILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVD 290
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G R FRDQL I +C+ NL + MFSAT+T V KWCRR LK + + VG R
Sbjct: 291 KLFEDGTRCFRDQLEAISKSCTNENLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHR 348
>gi|340715568|ref|XP_003396283.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
terrestris]
Length = 582
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 111/178 (62%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKTAAFL+PIIH L GP+ GFR VI+ PTRELAKQTY E +RLSEG
Sbjct: 171 GRNVLACAPTGSGKTAAFLLPIIHYLGGPEKKGFRTVILSPTRELAKQTYRECLRLSEGY 230
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R H+I K+ QA K+G +S+QKFD+LITTP +++YLL DPPA++ +NVEWLIVDE D
Sbjct: 231 NFRVHIISKVNQALNKYGLKSSQKFDILITTPKRIIYLLNQDPPAISFSNVEWLIVDEVD 290
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G R FRDQL I +C+ NL + MFSAT+T V KWCRR LK + + VG R
Sbjct: 291 KLFEDGTRCFRDQLETISKSCTNENLHKAMFSATNTPIVTKWCRRNLKGLITVTVGHR 348
>gi|410915742|ref|XP_003971346.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Takifugu
rubripes]
Length = 628
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 140/178 (78%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ ACAPTGSGKT AF +P++ L+ P NLGFRAVI+ PTRELA QTY E +RL++G+
Sbjct: 217 GRELLACAPTGSGKTLAFCVPLLAHLQQPANLGFRAVIISPTRELASQTYRELLRLTDGV 276
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+K+GPRS +K+D+LI+TPN+LV+LL+ DPPAL+L++VEWL+VDESD
Sbjct: 277 GFRVHIIDKASLAAKKYGPRSNKKYDILISTPNRLVFLLKQDPPALDLSSVEWLVVDESD 336
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ ACSG ++R FSAT T DV +WCR L V +N+G R
Sbjct: 337 KLFEDGKTGFRDQLASIFLACSGSKVRRAFFSATCTSDVEQWCRLNLDNLVSVNIGPR 394
>gi|348518535|ref|XP_003446787.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Oreochromis niloticus]
Length = 616
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 139/178 (78%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ ACAPTGSGKT AF +P++ L+ P N GFR VI+ PTRELA QTY E +RLSEG+
Sbjct: 221 GRELLACAPTGSGKTLAFCLPLLAQLQQPANQGFRGVIISPTRELASQTYRELLRLSEGV 280
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+K+GPRS +K+D+L++TPN+L++LL+ DPPA++L++VEWLIVDESD
Sbjct: 281 GFRVHIIDKASLAAKKYGPRSNKKYDILVSTPNRLIFLLKQDPPAIDLSSVEWLIVDESD 340
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ ACSGP ++R FSAT T DV +WCR L V +N+G R
Sbjct: 341 KLFEDGKTGFREQLATIFLACSGPKVRRAFFSATCTADVEQWCRLNLDNLVSVNIGHR 398
>gi|321466548|gb|EFX77543.1| hypothetical protein DAPPUDRAFT_321368 [Daphnia pulex]
Length = 581
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 136/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKTAAFL+PIIH L P+ GFRAVIV PTRELA QT+ E V+L+EG+G
Sbjct: 174 REILACAPTGSGKTAAFLVPIIHCLGAPQKKGFRAVIVSPTRELANQTHRECVKLTEGIG 233
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR HVI + +A +KFGP+S+Q+FD+LITTPN+LV+LL +PPA++L NVEWLIVDESDK
Sbjct: 234 LRCHVIDNVGKATQKFGPKSSQRFDILITTPNRLVFLLSQEPPAISLKNVEWLIVDESDK 293
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G +GFRDQL IY AC ++R FSAT DV +WC+ L V + +G +
Sbjct: 294 LFEEGRQGFRDQLGAIYRACDSNQIRRAFFSATFAFDVQEWCKLNLDNVVMLTIGQK 350
>gi|47227152|emb|CAG00514.1| unnamed protein product [Tetraodon nigroviridis]
Length = 649
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 138/178 (77%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ ACAPTGSGKT AF IP++ L+ P NLGFRAVI+ PTRELA QTY E +RL++G
Sbjct: 215 GRELLACAPTGSGKTLAFCIPLLAHLQQPANLGFRAVIISPTRELASQTYRELLRLTDGA 274
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+K+GP S +K+D+LI+TPN+L++LL+ DPPAL+L++VEWL+VDESD
Sbjct: 275 GFRVHIIDKASLAAKKYGPHSNKKYDILISTPNRLIFLLKQDPPALDLSSVEWLVVDESD 334
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ ACSG ++R FSAT T DV +WCR L V +N+G R
Sbjct: 335 KLFEDGKTGFREQLATIFLACSGSKVRRAFFSATCTSDVEQWCRLNLDNLVSVNIGPR 392
>gi|327291685|ref|XP_003230551.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Anolis
carolinensis]
Length = 487
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 138/177 (77%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGKT AF +PI+ L+ P N GFRA+I+ PTRELA QT+ E ++LSEG G
Sbjct: 109 RELLACAPTGSGKTLAFSLPILTHLKQPMNKGFRALILAPTRELASQTHRELLKLSEGTG 168
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K +AA+KFGP+S+QKFDVL+TTPN+L+YLL+ DPPA++L+ VEWL+VDESDK
Sbjct: 169 FRIHMIHKAAEAAKKFGPKSSQKFDVLVTTPNRLIYLLKQDPPAIDLSRVEWLVVDESDK 228
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFRDQLA +++ACS P KR +FSAT DV +WCR L V +++G R
Sbjct: 229 LFEEGKTGFRDQLATLFSACSSPLAKRALFSATFAHDVEQWCRLNLDSVVSVSIGAR 285
>gi|443693266|gb|ELT94682.1| hypothetical protein CAPTEDRAFT_187719 [Capitella teleta]
Length = 604
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 139/177 (78%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKTAAFL+P++ L+ P+ GFRA+I+ PTRELAKQTY E +R+S+GLG
Sbjct: 183 REILACAPTGSGKTAAFLLPVLCHLKTPQKNGFRALILSPTRELAKQTYRECMRISDGLG 242
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H I K+ A +KFGP+S+Q+FD+L+TTPN+L+++L+ +PPA++L N+EWLIVDESDK
Sbjct: 243 FRIHYINKVSTAIDKFGPKSSQRFDILVTTPNRLIFMLKQEPPAIDLKNIEWLIVDESDK 302
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR+QLA I+ AC N++R FSAT T DV +WC+ L VQ+ +G R
Sbjct: 303 LFEDGKTGFREQLAEIFKACDSTNVRRAFFSATFTYDVEEWCKLNLDNVVQVYIGAR 359
>gi|260799746|ref|XP_002594845.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
gi|229280082|gb|EEN50856.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
Length = 724
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 136/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKTAAF++PI+H LR P+ GFRAV+V PTRELAKQT+ RL EG G
Sbjct: 248 REILACAPTGSGKTAAFILPILHHLREPRRQGFRAVVVSPTRELAKQTFTWFQRLGEGRG 307
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R + I K QAA+KFGP SA+KFD+L+TTPN+LVY+L+ DPP ++L +VEWL+VDESDK
Sbjct: 308 FRTYYIEKPAQAAKKFGPNSAKKFDILVTTPNRLVYMLKQDPPIVSLHSVEWLVVDESDK 367
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G +GFRDQL VIY AC +++R MFSAT DV +WC+ L V +++G R
Sbjct: 368 LFEEGKQGFRDQLGVIYQACDSSHVRRAMFSATFAYDVEQWCKVNLDNVVTVSIGAR 424
>gi|81294184|gb|AAI08030.1| Ddx52 protein [Danio rerio]
Length = 588
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKT AF +P++ LR P N GFRA+I+ PTRELA QT+ E ++LSEG+G
Sbjct: 205 REILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRALIISPTRELATQTHRELLKLSEGVG 264
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K +A +K+GP+SA+KFD+L+TTPN+L+YLL DPPA+NL++VEWL+VDESDK
Sbjct: 265 FRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDK 324
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR+QLA I+ ACS PN++R +FSAT DV +WC+ L V +++G R
Sbjct: 325 LFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERWCKLNLDNLVSVSIGAR 381
>gi|113195544|ref|NP_001037780.1| probable ATP-dependent RNA helicase DDX52 [Danio rerio]
gi|109150086|gb|AAI17611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Danio rerio]
gi|182892172|gb|AAI65190.1| Ddx52 protein [Danio rerio]
Length = 606
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKT AF +P++ LR P N GFRA+I+ PTRELA QT+ E ++LSEG+G
Sbjct: 205 REILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRALIISPTRELATQTHRELLKLSEGVG 264
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K +A +K+GP+SA+KFD+L+TTPN+L+YLL DPPA+NL++VEWL+VDESDK
Sbjct: 265 FRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDK 324
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR+QLA I+ ACS PN++R +FSAT DV +WC+ L V +++G R
Sbjct: 325 LFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERWCKLNLDNLVSVSIGAR 381
>gi|45768538|gb|AAH67608.1| Ddx52 protein [Danio rerio]
Length = 501
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKT AF +P++ LR P N GFRA+I+ PTRELA QT+ E ++LSEG+G
Sbjct: 100 REILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRALIISPTRELATQTHRELLKLSEGVG 159
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K +A +K+GP+SA+KFD+L+TTPN+L+YLL DPPA+NL++VEWL+VDESDK
Sbjct: 160 FRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDK 219
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR+QLA I+ ACS PN++R +FSAT DV +WC+ L V +++G R
Sbjct: 220 LFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERWCKLNLDNLVSVSIGAR 276
>gi|432897373|ref|XP_004076440.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Oryzias
latipes]
Length = 657
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 106/178 (59%), Positives = 138/178 (77%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ ACAPTGSGKT AF +P++ L+ P NLGFRAVI+ PTRELA QTY E +RLSEG+
Sbjct: 213 GRELLACAPTGSGKTLAFCLPLLTHLQHPANLGFRAVIISPTRELASQTYRELLRLSEGV 272
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+K+GP S +K+D+L++TPN+LV+LL+ DPPA++L+ VEWLIVDESD
Sbjct: 273 GFRVHIIDKASLAAKKYGPHSNKKYDILVSTPNRLVFLLKQDPPAIDLSCVEWLIVDESD 332
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G RGFR+QLA I+ +C G ++R FSAT T +V +WCR L V +N+G R
Sbjct: 333 KLFEDGKRGFREQLATIFLSCCGAKVRRAFFSATCTTEVEQWCRLNLDNLVSVNIGHR 390
>gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Monodelphis domestica]
Length = 608
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA QT+ E VRLSEG
Sbjct: 210 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQTHRELVRLSEGT 269
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 270 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESD 329
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 330 KLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCKLNLDSVISVSIGAR 387
>gi|270003649|gb|EFA00097.1| hypothetical protein TcasGA2_TC002912 [Tribolium castaneum]
Length = 557
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKTAAFLIPI+H L+GP+ GFRA+++CPTRELAKQT E +RLSEG
Sbjct: 152 GRNLLACAPTGSGKTAAFLIPILHDLKGPRKEGFRALVLCPTRELAKQTQRECIRLSEGK 211
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G HVI KI +A ++GP S+QKFD+LITTPN++ +LL+ D AL+LAN++WL++DE+D
Sbjct: 212 GFHVHVISKINKALIQYGPNSSQKFDILITTPNRVCFLLKQDQAALSLANIKWLVIDEAD 271
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G RGFR+QL I AC+ K MFSAT+T VAKWC +K V+I VG R
Sbjct: 272 KLFETGNRGFREQLDQILNACTNKEKKVAMFSATYTPMVAKWCVHNMKGLVRITVGQR 329
>gi|332374956|gb|AEE62619.1| unknown [Dendroctonus ponderosae]
Length = 588
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKTAAFL+PII +L+ P+ GFRA+I+CPTRELA QT E VRLSEG+
Sbjct: 155 GRHLLACAPTGSGKTAAFLVPIIEALKEPQKQGFRALILCPTRELASQTQRECVRLSEGI 214
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+IGK+ +A ++G +S +K+D+LITTPN+L +LL+ DPPA+ L+NV+WL++DE+D
Sbjct: 215 GFRIHIIGKVNKALTQYGAKSNKKYDILITTPNRLCFLLKQDPPAIQLSNVQWLVIDEAD 274
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G R FRDQL I ACS + K MFSATHT VAKWC + +++ VG R
Sbjct: 275 KLFEEGSRSFRDQLDQILQACSSSDRKVAMFSATHTPVVAKWCVHNMPGLLRVTVGQR 332
>gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Monodelphis domestica]
Length = 604
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA QT+ E VRLSEG
Sbjct: 206 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQTHRELVRLSEGT 265
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 266 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESD 325
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 326 KLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCKLNLDSVISVSIGAR 383
>gi|189235329|ref|XP_975300.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 553
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/178 (60%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKTAAFLIPI+H L+GP+ GFRA+++CPTRELAKQT E +RLSEG
Sbjct: 152 GRNLLACAPTGSGKTAAFLIPILHDLKGPRKEGFRALVLCPTRELAKQTQRECIRLSEGK 211
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G HVI KI +A ++GP S+QKFD+LITTPN++ +LL+ D AL+LAN++WL++DE+D
Sbjct: 212 GFHVHVISKINKALIQYGPNSSQKFDILITTPNRVCFLLKQDQAALSLANIKWLVIDEAD 271
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G RGFR+QL I AC+ K MFSAT+T VAKWC +K V+I VG R
Sbjct: 272 KLFETGNRGFREQLDQILNACTNKEKKVAMFSATYTPMVAKWCVHNMKGLVRITVGQR 329
>gi|395531966|ref|XP_003768044.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sarcophilus
harrisii]
Length = 618
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA QT+ E VR+SEG
Sbjct: 211 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQTHRELVRISEGT 270
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 271 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLKNVEWLVVDESD 330
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + I++G R
Sbjct: 331 KLFEDGKTGFRDQLAFIFLACTSHKVRRAMFSATFAHDVEQWCKLNLDNVISISIGAR 388
>gi|56972628|gb|AAH88581.1| ddx52-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 585
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+I A APTGSGKT AF IPI+ L+ PKN G RA+I+ PTRELA QT+ E V+LS+G+
Sbjct: 208 GREILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALIISPTRELANQTHRELVKLSDGI 267
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R HVI K AA+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESD
Sbjct: 268 GFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESD 327
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V +++G R
Sbjct: 328 KLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSIGAR 385
>gi|113197619|gb|AAI21228.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 595
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+I A APTGSGKT AF IPI+ L+ PKN G RA+I+ PTRELA QT+ E V+LS+G+
Sbjct: 208 GREILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALIISPTRELANQTHRELVKLSDGI 267
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R HVI K AA+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESD
Sbjct: 268 GFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESD 327
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V +++G R
Sbjct: 328 KLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSIGAR 385
>gi|172355578|ref|NP_001116486.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus (Silurana)
tropicalis]
gi|171846831|gb|AAI61533.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 416
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+I A APTGSGKT AF IPI+ L+ PKN G RA+I+ PTRELA QT+ E V+LS+G+
Sbjct: 10 GREILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALIISPTRELANQTHRELVKLSDGI 69
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R HVI K AA+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESD
Sbjct: 70 GFRIHVINKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESD 129
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V +++G R
Sbjct: 130 KLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSIGAR 187
>gi|157073998|ref|NP_001096708.1| probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|160380636|sp|A5D7C1.1|DDX52_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=DEAD box protein 52
gi|146186791|gb|AAI40502.1| DDX52 protein [Bos taurus]
gi|296477012|tpg|DAA19127.1| TPA: probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|440912331|gb|ELR61911.1| Putative ATP-dependent RNA helicase DDX52 [Bos grunniens mutus]
Length = 596
Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 105/178 (58%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V+LSEG
Sbjct: 200 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQIHRELVKLSEGT 259
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 319
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WCR L + ++VG R
Sbjct: 320 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCRLNLDSVITVSVGAR 377
>gi|348567701|ref|XP_003469637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Cavia
porcellus]
Length = 594
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 197 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELIKISEGT 256
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 257 GFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 316
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WCR L + +++G R
Sbjct: 317 KLFEDGKTGFRDQLASIFLACTSHQVRRAMFSATFAYDVEQWCRLNLDNVITVSIGAR 374
>gi|256985213|ref|NP_084372.2| probable ATP-dependent RNA helicase DDX52 [Mus musculus]
gi|341940434|sp|Q8K301.2|DDX52_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
gi|74225794|dbj|BAE21716.1| unnamed protein product [Mus musculus]
gi|148683781|gb|EDL15728.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVVSVSIGAR 380
>gi|74177868|dbj|BAE39019.1| unnamed protein product [Mus musculus]
Length = 595
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVVSVSIGAR 380
>gi|395846002|ref|XP_003795705.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Otolemur
garnettii]
Length = 572
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKVSEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|26348749|dbj|BAC38014.1| unnamed protein product [Mus musculus]
Length = 579
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVVSVSIGAR 380
>gi|148226210|ref|NP_001079530.1| Probable ATP-dependent RNA helicase DDX52-like [Xenopus laevis]
gi|27882196|gb|AAH44017.1| MGC53409 protein [Xenopus laevis]
Length = 686
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/178 (60%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+I A APTGSGKT AF IPI+ L+ PKN G RA+++ PTRELA QT E V+LS+G+
Sbjct: 208 GREILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALVISPTRELASQTQRELVKLSDGI 267
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R HVI K AA+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESD
Sbjct: 268 GFRIHVIDKAAVAAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESD 327
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V ++VG R
Sbjct: 328 KLFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSVGAR 385
>gi|345330125|ref|XP_003431468.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ornithorhynchus anatinus]
Length = 840
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 438 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELVKISEGT 497
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL +PP ++L VEWL+VDESD
Sbjct: 498 GFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLNQEPPGIDLTRVEWLVVDESD 557
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L + +++G R
Sbjct: 558 KLFEDGKSGFRDQLASIFLACTSPKVRRAMFSATFAHDVEQWCKLNLDNIISVSIGAR 615
>gi|62087456|dbj|BAD92175.1| ATP-dependent RNA helicase ROK1 isoform a variant [Homo sapiens]
Length = 512
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 378
>gi|196049877|pdb|3DKP|A Chain A, Human Dead-Box Rna-Helicase Ddx52, Conserved Domain I In
Complex With Adp
Length = 245
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 66 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 125
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 126 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 185
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 186 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 243
>gi|281346401|gb|EFB21985.1| hypothetical protein PANDA_014345 [Ailuropoda melanoleuca]
Length = 524
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S+QKFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSQKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 378
>gi|291405635|ref|XP_002719293.1| PREDICTED: ATP-dependent RNA helicase ROK1 [Oryctolagus cuniculus]
Length = 599
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|119578005|gb|EAW57601.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_c [Homo
sapiens]
Length = 491
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 94 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 154 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 213
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 214 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 271
>gi|397494238|ref|XP_003817991.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
paniscus]
gi|410051505|ref|XP_003953105.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Pan
troglodytes]
Length = 491
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 94 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 154 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 213
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 214 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 271
>gi|7023040|dbj|BAA91812.1| unnamed protein product [Homo sapiens]
Length = 491
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 94 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 154 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 213
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 214 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 271
>gi|301779033|ref|XP_002924934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ailuropoda melanoleuca]
Length = 598
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S+QKFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSQKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 378
>gi|351696669|gb|EHA99587.1| Putative ATP-dependent RNA helicase DDX52, partial [Heterocephalus
glaber]
Length = 442
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 64 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELIKISEGT 123
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWLIVDESD
Sbjct: 124 GFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESD 183
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 184 KLFEDGKTGFRDQLASIFLACTSYQVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 241
>gi|193785511|dbj|BAG50877.1| unnamed protein product [Homo sapiens]
gi|193786536|dbj|BAG51319.1| unnamed protein product [Homo sapiens]
Length = 413
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 16 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 75
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 76 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 135
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 136 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 193
>gi|38569505|ref|NP_008941.2| probable ATP-dependent RNA helicase DDX52 [Homo sapiens]
gi|296439375|sp|Q9Y2R4.3|DDX52_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
Length = 599
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|397494236|ref|XP_003817990.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1 [Pan
paniscus]
Length = 413
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 16 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 75
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 76 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 135
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 136 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 193
>gi|349603916|gb|AEP99614.1| putative ATP-dependent RNA helicase DDX52-like protein, partial
[Equus caballus]
Length = 512
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 115 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELVKISEGT 174
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWLIVDESD
Sbjct: 175 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESD 234
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 235 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 292
>gi|27697141|gb|AAH41785.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Homo sapiens]
gi|119578004|gb|EAW57600.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_b [Homo
sapiens]
Length = 599
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|119351039|gb|ABL63415.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ +PP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIGAR 380
>gi|119351037|gb|ABL63414.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ +PP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIGAR 380
>gi|332847931|ref|XP_001173155.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
troglodytes]
gi|410211834|gb|JAA03136.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410252896|gb|JAA14415.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410307108|gb|JAA32154.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410349923|gb|JAA41565.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
Length = 599
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|58177858|gb|AAH89107.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ +PP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIGAR 380
>gi|426237078|ref|XP_004012488.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Ovis aries]
Length = 598
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E ++LSEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQIHRELIKLSEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|16758984|ref|NP_445977.1| probable ATP-dependent RNA helicase DDX52 [Rattus norvegicus]
gi|34582286|sp|Q99PT0.1|DDX52_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; Short=rROK1L;
AltName: Full=DEAD box protein 52
gi|12862376|dbj|BAB32441.1| ROK1-like protein [Rattus norvegicus]
gi|149053684|gb|EDM05501.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ +PP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIGAR 380
>gi|149724020|ref|XP_001503919.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Equus
caballus]
Length = 597
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 200 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELVKISEGT 259
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWLIVDESD
Sbjct: 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLIVDESD 319
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 320 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 377
>gi|20809366|gb|AAH29094.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ P ++R MFSAT DV +WC+ L + +++G R
Sbjct: 323 KLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 380
>gi|51261421|gb|AAH79986.1| LOC446276 protein, partial [Xenopus laevis]
Length = 587
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 135/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I A APTGSGKT AF IPI+ L+ PKN G RA+++ PTRELA QT+ E V+LS+G+G
Sbjct: 209 REILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALVISPTRELASQTHRELVKLSDGIG 268
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R HVI K +A+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESDK
Sbjct: 269 FRIHVIDKAAVSAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDK 328
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V ++VG R
Sbjct: 329 LFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSVGAR 385
>gi|335298081|ref|XP_003358192.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sus scrofa]
Length = 599
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E V++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELVKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|410980532|ref|XP_003996631.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Felis catus]
Length = 597
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 200 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 259
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 319
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 320 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 377
>gi|73966874|ref|XP_852958.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Canis lupus
familiaris]
Length = 598
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 378
>gi|395748896|ref|XP_003778849.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Pongo abelii]
Length = 491
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 94 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 154 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 213
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 214 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 271
>gi|67677953|gb|AAH97566.1| LOC446276 protein, partial [Xenopus laevis]
Length = 585
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 135/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I A APTGSGKT AF IPI+ L+ PKN G RA+++ PTRELA QT+ E V+LS+G+G
Sbjct: 209 REILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALVISPTRELASQTHRELVKLSDGIG 268
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R HVI K +A+KFGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESDK
Sbjct: 269 FRIHVIDKAAVSAKKFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDK 328
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V ++VG R
Sbjct: 329 LFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSVGAR 385
>gi|297700670|ref|XP_002827359.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Pongo abelii]
Length = 600
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 380
>gi|355683377|gb|AER97087.1| DEAD box polypeptide 52 [Mustela putorius furo]
Length = 598
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|326931593|ref|XP_003211912.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Meleagris gallopavo]
Length = 814
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IP++ L+ P N GFRA+I+ PTRELA QT+ E V+L+EG
Sbjct: 407 GRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRELASQTHRELVKLAEGT 466
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPPA++L +VEWL+VDESD
Sbjct: 467 GFRIHMIQKASEAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESD 526
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ ++R FSAT DV +WC+ L V ++VG R
Sbjct: 527 KLFEDGKSGFREQLASIFLACTSHVVRRAFFSATFARDVEEWCKLNLDSIVLVSVGAR 584
>gi|119578003|gb|EAW57599.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_a [Homo
sapiens]
Length = 381
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 134/176 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIG 377
>gi|355568613|gb|EHH24894.1| Putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|355754079|gb|EHH58044.1| Putative ATP-dependent RNA helicase DDX52 [Macaca fascicularis]
Length = 599
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|332258725|ref|XP_003278445.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Nomascus
leucogenys]
Length = 598
Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 378
>gi|380788803|gb|AFE66277.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|383415417|gb|AFH30922.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
Length = 599
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|402899925|ref|XP_003912934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Papio anubis]
Length = 599
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANRGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDSVISVSIGAR 379
>gi|431890891|gb|ELK01770.1| Putative ATP-dependent RNA helicase DDX52 [Pteropus alecto]
Length = 598
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILIHLKQPTNKGFRALIISPTRELASQIHRELVKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 378
>gi|354497109|ref|XP_003510664.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 1
[Cricetulus griseus]
Length = 599
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 204 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALVISPTRELASQIHRELIKISEGT 263
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA++FGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 264 GFRIHMIHKAAIAAKRFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 323
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L V +++G R
Sbjct: 324 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVVTVSIGAR 381
>gi|148222272|ref|NP_001086456.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus laevis]
gi|117167895|gb|AAI24841.1| LOC446276 protein [Xenopus laevis]
Length = 614
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 135/177 (76%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I A APTGSGKT AF IPI+ L+ PKN G RA+++ PTRELA QT+ E V+LS+G+G
Sbjct: 209 REILASAPTGSGKTMAFSIPILAHLQCPKNKGCRALVISPTRELASQTHRELVKLSDGIG 268
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R HVI K +A++FGP+S++K D+L+TTPN+L+YLL+ DPP ++L++VEWLIVDESDK
Sbjct: 269 FRIHVIDKAAVSAKRFGPKSSKKIDILVTTPNRLIYLLKQDPPGIDLSSVEWLIVDESDK 328
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFRDQLA I+ AC+ LKR MFSAT DV +WC+ L V ++VG R
Sbjct: 329 LFEDGKTGFRDQLASIFVACTSHLLKRAMFSATFAFDVEQWCKLHLDNVVSVSVGAR 385
>gi|354497111|ref|XP_003510665.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 2
[Cricetulus griseus]
Length = 601
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 204 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALVISPTRELASQIHRELIKISEGT 263
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA++FGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 264 GFRIHMIHKAAIAAKRFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 323
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L V +++G R
Sbjct: 324 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVVTVSIGAR 381
>gi|71897029|ref|NP_001025896.1| probable ATP-dependent RNA helicase DDX52 [Gallus gallus]
gi|60098635|emb|CAH65148.1| hypothetical protein RCJMB04_4d17 [Gallus gallus]
Length = 603
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IP++ L+ P N GFRA+I+ PTRELA QT+ E V+L++G
Sbjct: 196 GRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRELASQTHRELVKLADGT 255
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPPA++L +VEWL+VDESD
Sbjct: 256 GFRIHMIQKASEAAKKFGPKSSRKFDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESD 315
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R FSAT DV +WC+ L V ++VG R
Sbjct: 316 KLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVSVGAR 373
>gi|344285314|ref|XP_003414407.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Loxodonta africana]
Length = 529
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 140 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQIHRELLKISEGT 199
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 200 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 259
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 260 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 317
>gi|403274723|ref|XP_003929113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 133/178 (74%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 200 SRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 259
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 319
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WCR L + +++G R
Sbjct: 320 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCRLNLDNVISVSIGAR 377
>gi|449479900|ref|XP_002199492.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Taeniopygia
guttata]
Length = 615
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 137/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IP++ L+ P+N GFRA+I+ PTRELA QT+ E V+L+EG
Sbjct: 208 GRELLASAPTGSGKTLAFCIPLLTHLKQPRNKGFRALIISPTRELASQTHRELVKLAEGT 267
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPPA++L++VEWL+VDESD
Sbjct: 268 GFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPNRLIYLLKEDPPAIDLSSVEWLVVDESD 327
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QL I+ AC+ +R +FSAT DV +WC+ L V ++VG R
Sbjct: 328 KLFEDGKSGFREQLGTIFLACTSHLARRALFSATFAHDVEEWCKLNLDNVVLVSVGAR 385
>gi|109114658|ref|XP_001112113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Macaca
mulatta]
Length = 599
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDES+
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESN 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|296201956|ref|XP_002748362.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Callithrix
jacchus]
Length = 575
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 133/178 (74%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFGIPILMQLKQTANKGFRALIISPTRELASQIHRELVKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAVVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>gi|405975314|gb|EKC39888.1| Putative ATP-dependent RNA helicase DDX52 [Crassostrea gigas]
Length = 563
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 103/177 (58%), Positives = 133/177 (75%), Gaps = 5/177 (2%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKTAAFL+PI+H L+ K G+RA+I+ PTRELAKQ Y E +RLSEG+G
Sbjct: 171 REILACAPTGSGKTAAFLLPIMHHLKEHKKKGYRALILAPTRELAKQIYREFLRLSEGVG 230
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+AH I K EK R +K+DVL++TPN+LVY+LQ DPP +NL+ VEWL++DESDK
Sbjct: 231 LKAHYISK--STTEK---RLEKKYDVLVSTPNRLVYMLQEDPPLINLSQVEWLVIDESDK 285
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFRDQLA +Y AC+ N+KR MFSAT +V +WC+ L +Q+ +G +
Sbjct: 286 LFEDGKTGFRDQLAKVYQACNSNNVKRAMFSATFAVEVEEWCKLNLDNVLQVYIGAK 342
>gi|340374721|ref|XP_003385886.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Amphimedon queenslandica]
Length = 593
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 131/176 (74%)
Query: 51 QIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGL 110
++ CAPTGSGKTAAFL+PI+ L+ P+ +GFRAVIV PTRELA+QTY E VRLS G G
Sbjct: 208 EVLVCAPTGSGKTAAFLVPILTLLKSPRRVGFRAVIVSPTRELAQQTYRECVRLSSGSGF 267
Query: 111 RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
HV+ K +A FGP+S+ KFD+L+TTPN+LV++L +DPP + L NVEWLI+DE DKL
Sbjct: 268 SIHVLTKATASANSFGPQSSLKFDILVTTPNRLVHMLSLDPPGIVLDNVEWLILDECDKL 327
Query: 171 FEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
FE GV GF+DQ+ I+ ACS PN+KRG+FSAT V ++ R V++ +GL+
Sbjct: 328 FEDGVTGFKDQIDEIFTACSNPNIKRGLFSATLASGVEEFSRAHFDNFVRVIIGLQ 383
>gi|156373178|ref|XP_001629410.1| predicted protein [Nematostella vectensis]
gi|156216410|gb|EDO37347.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%)
Query: 43 TYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETV 102
T L GR++ CAPTGSGKTAAF++PI+H L+GPK GFRAV+V PTRELA+Q Y E
Sbjct: 78 TPLMAHGREVLCCAPTGSGKTAAFILPILHMLKGPKKSGFRAVVVSPTRELAQQIYREFC 137
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L++G R HV+ K + FG +S+++FD+L+TTPN+LV+LL +PP + L NVEWL
Sbjct: 138 HLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLVHLLTQEPPGIELHNVEWL 197
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+DKLFE G GFR+Q+A IY AC+ P++ RG+FSAT + + +W L V++
Sbjct: 198 ILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLHLDNHVRVT 257
Query: 223 VGLR 226
VG+R
Sbjct: 258 VGIR 261
>gi|3646126|emb|CAA09374.1| ATP-dependent RNA helicase [Homo sapiens]
Length = 420
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 121/153 (79%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 23 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 82
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 83 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 142
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSA 201
KLFE G GFRDQLA I+ AC+ ++R MFSA
Sbjct: 143 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSA 175
>gi|432113623|gb|ELK35905.1| Putative ATP-dependent RNA helicase DDX52 [Myotis davidii]
Length = 581
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA QT+ E V++SEG+
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELASQTHRELVKISEGM 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFG +S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAIAAKKFGSKSSKKFDILVTTPNRLIYLLKRDPPGIDLTSVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 379
>gi|391340780|ref|XP_003744714.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Metaseiulus occidentalis]
Length = 520
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 124/177 (70%), Gaps = 2/177 (1%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ APTGSGKTAAF+IP++H L P GFRAV+VCPTRELAKQTY E VRL+EG G
Sbjct: 112 REVLVSAPTGSGKTAAFVIPLVHLLGEPSTDGFRAVVVCPTRELAKQTYREVVRLAEGTG 171
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR +V+ K A ++F A+ D+++TTPN+LV+LL+ L L V+ LI+DESD+
Sbjct: 172 LRTYVLTKTSNAQKRFSSDMAKSLDIMVTTPNRLVWLLK--ETKLTLGRVQHLIIDESDR 229
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFEAG GFRDQL IY AC LKR MFSAT ++D+ KWCR L V + VG +
Sbjct: 230 LFEAGKSGFRDQLVKIYEACDSSKLKRAMFSATSSKDLDKWCRLHLDSVVIVAVGAK 286
>gi|195128419|ref|XP_002008661.1| GI13618 [Drosophila mojavensis]
gi|193920270|gb|EDW19137.1| GI13618 [Drosophila mojavensis]
Length = 595
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 125/177 (70%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L++G G
Sbjct: 164 RALMACAPTGSGKTLAFLTPIINGLRCHKTTGLRALVLAPTRELAQQIYRECGELTKGTG 223
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +++GP QK+D+LI+TPN++ +LLQ PP L+ ++EWL++DE+D+
Sbjct: 224 LRTHFISKVSEAKQQYGPECKQKYDILISTPNRVRFLLQQQPPLLDFKSIEWLVLDEADR 283
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAAC+ P + FSAT+T VAKW R LK V++ +G++
Sbjct: 284 LMEEGQNNFKEQLDDIYAACTNPQKRVAFFSATYTVPVAKWALRHLKNLVRVTIGVQ 340
>gi|157134089|ref|XP_001663141.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870607|gb|EAT34832.1| AAEL012962-PA [Aedes aegypti]
Length = 591
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + ACAPTGSGKTAAFLIPIIH L+ P GFRA++VCPTRELAKQT E++RL E +
Sbjct: 177 GHPVHACAPTGSGKTAAFLIPIIHHLQKPMKCGFRALVVCPTRELAKQTQRESLRLCEEI 236
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
LR HVI K+ + +G S + +D+L+TTPN++ +L DPP ++L+N+++++VDE+D
Sbjct: 237 NLRTHVITKVDENTTDYGLESRKHYDILVTTPNRICFLANHDPPLIDLSNIQYIVVDEAD 296
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
KLFE FRDQL I AC+ P FSAT T++V W + RV+ +VG+
Sbjct: 297 KLFEESKNSFRDQLDSIMNACTNPCKVVAFFSATVTKEVTTWASENMPNRVRFSVGV 353
>gi|195379282|ref|XP_002048409.1| GJ13954 [Drosophila virilis]
gi|194155567|gb|EDW70751.1| GJ13954 [Drosophila virilis]
Length = 605
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 121/178 (67%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 162 NRALMACAPTGSGKTLAFLTPIINGLRSHKTTGLRALVLAPTRELAQQIYRECAELTRGT 221
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
GLR H I K+ +A ++ GP QK+D+LI+TPN++ +LLQ PP L+ +EW ++DE+D
Sbjct: 222 GLRTHFISKVSEARQQHGPDCKQKYDILISTPNRVRFLLQQQPPLLDFKGIEWFVLDEAD 281
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+L E G F++QL IYAAC+ P + FSAT+T VAKW R LK V++ +G++
Sbjct: 282 RLMEEGQNNFKEQLDEIYAACTHPQKRVAFFSATYTVPVAKWALRHLKNLVRVTIGVQ 339
>gi|170056673|ref|XP_001864136.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
gi|167876423|gb|EDS39806.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
Length = 572
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 123/176 (69%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + ACAPTGSGKTAAFLIPIIH L+ P GFRA+IVCPTRELAKQT E +RL E +
Sbjct: 177 GHPLHACAPTGSGKTAAFLIPIIHHLKKPMKCGFRALIVCPTRELAKQTQREALRLCEEI 236
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
LR HVI K+ + +G S + +D+L+TTPN++ +L +PP ++L+N+++++VDE+D
Sbjct: 237 NLRTHVITKVDENTTDYGLESRKHYDILVTTPNRVCFLAGHNPPLIDLSNIQFVVVDEAD 296
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE FR+QL I AAC+ P FSAT T++V+ W R + RV+ +VG
Sbjct: 297 KLFEESRNSFREQLDTIMAACTNPCKVVAFFSATVTKEVSAWARDHMPTRVRFSVG 352
>gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta]
gi|190654683|gb|EDV51926.1| GG15782 [Drosophila erecta]
Length = 592
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 123/178 (69%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACAPTGSGKT AFL PII+ LR + G RA+++ PTRELA+Q Y E L+
Sbjct: 155 GRALMACAPTGSGKTLAFLTPIINGLRAHRTSGLRALVLAPTRELAQQIYRECAELTRET 214
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
GLR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D
Sbjct: 215 GLRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEAD 274
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 275 RLMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 332
>gi|24666101|ref|NP_649009.1| CG5589 [Drosophila melanogaster]
gi|7293941|gb|AAF49303.1| CG5589 [Drosophila melanogaster]
Length = 594
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 157 RALMACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 217 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 276
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 277 LMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 333
>gi|312380576|gb|EFR26532.1| hypothetical protein AND_07336 [Anopheles darlingi]
Length = 608
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 121/174 (69%), Gaps = 1/174 (0%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR 111
+ ACAPTGSGKTAAFLIPI+H L+GP GFRA+I+CPTRELAKQT E +RL +G+ +R
Sbjct: 181 LHACAPTGSGKTAAFLIPILHHLKGPTKCGFRALIICPTRELAKQTQREALRLGDGMNIR 240
Query: 112 AHVIGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
HVI + ++ + S +K+D+L+TTPN++ YLL PP ++L+N++W++VDE+DKL
Sbjct: 241 THVIRTVDDRSKCDYTLESGRKYDILVTTPNRICYLLAQKPPQIDLSNIQWVVVDEADKL 300
Query: 171 FEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
FE FR+QL + AC P +FSAT T + +W + RR++ ++G
Sbjct: 301 FEDSKNSFREQLDTVLNACVNPTKVVALFSATQTREADQWVASNVPRRIRFSIG 354
>gi|383792218|gb|AFH41849.1| FI20004p1 [Drosophila melanogaster]
Length = 609
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 172 RALMACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETG 231
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 232 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 291
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 292 LMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 348
>gi|209418026|gb|ACI46551.1| RE58551p [Drosophila melanogaster]
Length = 609
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 172 RALMACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETG 231
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 232 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 291
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 292 LMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 348
>gi|158300210|ref|XP_001689233.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|158300212|ref|XP_320199.4| AGAP012358-PA [Anopheles gambiae str. PEST]
gi|157013048|gb|EDO63299.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|157013049|gb|EAA00143.4| AGAP012358-PA [Anopheles gambiae str. PEST]
Length = 598
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 121/175 (69%), Gaps = 1/175 (0%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR 111
+ ACAPTGSGKTAAFLIPI+H L+ P GFRA+I+CPTRELAKQT E +RL + + LR
Sbjct: 182 LHACAPTGSGKTAAFLIPILHHLKKPMKCGFRALIICPTRELAKQTQREALRLGDEMNLR 241
Query: 112 AHVIGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
HVI + + + S + +D+L+TTPN++ YLL +PP ++L+N++W+++DE+DKL
Sbjct: 242 THVIHMVDDPKKCDYSFASGRSYDILVTTPNRICYLLSQNPPKIDLSNIQWVVIDEADKL 301
Query: 171 FEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
FE FRDQL + AC+ P+ +FSAT T DV W + + R++ ++GL
Sbjct: 302 FEDSKNSFRDQLDTVLTACNNPSKTIALFSATQTRDVNLWVAKNVPNRIRFSIGL 356
>gi|198466271|ref|XP_002135148.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
gi|198150524|gb|EDY73775.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 161 RALMACAPTGSGKTLAFLTPIINGLRSHKTTGLRALVLAPTRELAQQIYRECSELTRETG 220
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G QK+D+LI+TPN++ +LLQ PP L+L VEW ++DE+D+
Sbjct: 221 LRTHFISKVSEAKQKHGAECKQKYDILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADR 280
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 281 LMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 337
>gi|195021969|ref|XP_001985492.1| GH14471 [Drosophila grimshawi]
gi|193898974|gb|EDV97840.1| GH14471 [Drosophila grimshawi]
Length = 603
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 121/178 (67%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL PII+SLR K G RA+++ PTRELA+Q Y E L+
Sbjct: 159 NRALMACAPTGSGKTLAFLTPIINSLRSHKTTGLRALVLAPTRELAQQIYRECGELTRST 218
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
GLR H I K+ +A ++ GP QK+D+LI+TPN++ ++LQ PP L+L +EW ++DE+D
Sbjct: 219 GLRTHFISKVSEARQQHGPECKQKYDILISTPNRVRFMLQQQPPLLDLKGIEWFVLDEAD 278
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+L E G F++QL IYAAC+ + FSAT+T VAKW R LK V+I +G++
Sbjct: 279 RLMEEGQNNFKEQLDDIYAACTHAQKRVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 336
>gi|195166521|ref|XP_002024083.1| GL22752 [Drosophila persimilis]
gi|194107438|gb|EDW29481.1| GL22752 [Drosophila persimilis]
Length = 597
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 161 RALMACAPTGSGKTLAFLTPIINGLRSHKTTGLRALVLAPTRELAQQIYRECSELTRETG 220
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G QK+D+LI+TPN++ +LLQ PP L+L VEW ++DE+D+
Sbjct: 221 LRTHFISKVSEAKQKHGAECKQKYDILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADR 280
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 281 LMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 337
>gi|85683111|gb|ABC73531.1| CG5589 [Drosophila miranda]
Length = 356
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 56 RALMACAPTGSGKTLAFLTPIINGLRSHKTTGLRALVLAPTRELAQQIYRECSELTRETG 115
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G QK+D+LI+TPN++ +LLQ PP L+L VEW ++DE+D+
Sbjct: 116 LRTHFISKVSEAKQKHGAECKQKYDILISTPNRVRFLLQQQPPLLDLKGVEWFVLDEADR 175
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 176 LMEEGQNNFKEQLDDIYAACSHPQKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 232
>gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni]
gi|194164208|gb|EDW79109.1| GK12420 [Drosophila willistoni]
Length = 541
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/178 (49%), Positives = 122/178 (68%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL PII+ LR + G RA+++ PTRELA+Q Y E L+
Sbjct: 158 NRALMACAPTGSGKTLAFLTPIINGLRSHQTSGIRALVLAPTRELAQQIYRECSELTRET 217
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
GLR H I K+ +A ++ GP QK+D+LI+TPN++ +LLQ +PP L+L+ VEW ++DE+D
Sbjct: 218 GLRTHFISKVSEAKQQHGPECKQKYDILISTPNRVRFLLQQEPPLLDLSAVEWFVLDEAD 277
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+L E G F++QL IY+ACS + FSAT+T VAKW R LK V+I +G++
Sbjct: 278 RLMEEGKNNFKEQLDDIYSACSHSGKRVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 335
>gi|195328469|ref|XP_002030937.1| GM24308 [Drosophila sechellia]
gi|194119880|gb|EDW41923.1| GM24308 [Drosophila sechellia]
Length = 592
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 121/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 157 RALMACAPTGSGKTLAFLTPIIDGLRVHKTTGLRALVLAPTRELAQQIYRECAELTRETG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 217 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 276
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 277 LMEEGQNNFKEQLDDIYAACSHPTKCVSFFSATYTVPVAKWALRHLKNLVRITIGVQ 333
>gi|194748100|ref|XP_001956487.1| GF25239 [Drosophila ananassae]
gi|190623769|gb|EDV39293.1| GF25239 [Drosophila ananassae]
Length = 535
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 120/177 (67%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL P+I+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 150 RALMACAPTGSGKTLAFLTPLINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETG 209
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ PP L+L+ VEW ++DE+D+
Sbjct: 210 LRTHFISKVSEAKQKHGTECKQRYDILVSTPNRVRFLLQQQPPLLDLSQVEWFVLDEADR 269
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V++ +G++
Sbjct: 270 LMEEGQNNFKEQLDDIYAACSNPGKCVAFFSATYTVPVAKWALRHLKNLVRVTIGIQ 326
>gi|195591171|ref|XP_002085316.1| GD12376 [Drosophila simulans]
gi|194197325|gb|EDX10901.1| GD12376 [Drosophila simulans]
Length = 592
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 121/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 157 RALMACAPTGSGKTLAFLTPIIDGLRVHKTTGLRALVLAPTRELAQQIYRECAELTRETG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 217 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 276
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 277 LMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 333
>gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba]
gi|194181068|gb|EDW94679.1| GE22119 [Drosophila yakuba]
Length = 594
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 121/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ L+ K G R++++ PTRELA+Q Y E L+ G
Sbjct: 158 RALMACAPTGSGKTLAFLTPIINGLKVHKTSGLRSLVLAPTRELAQQIYRECAELTRQTG 217
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 218 LSTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 277
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 278 LMEEGQNNFKEQLDDIYAACSHPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 334
>gi|4689114|gb|AAD27766.1|AF077033_1 putative ATP-dependent RNA helicase ROK1 [Homo sapiens]
Length = 598
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 115/163 (70%), Gaps = 1/163 (0%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
KL + L + A + + MFSAT DV +WC
Sbjct: 322 KLLKMQTGSETSWLPFSWPAHPTRS-EEPMFSATFAYDVEQWC 363
>gi|449680655|ref|XP_002168566.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Hydra
magnipapillata]
Length = 585
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 120/177 (67%), Gaps = 6/177 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGKT AF++PI+ L+ K G RAVIV PTREL++Q Y E VR++ G+G
Sbjct: 197 REMLACAPTGSGKTLAFILPILCHLKESKKTGIRAVIVSPTRELSQQIYREFVRMNAGIG 256
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+ ++ K K ++ D+LI+TPN+LV+LL+ D A +L VEWL++DE DK
Sbjct: 257 LKIDILTKA-----KINNFKSKACDILISTPNRLVHLLKQDF-APDLGIVEWLVLDEGDK 310
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR Q+A+IY ACS P++KR +FSAT V WC+ L V+I VG R
Sbjct: 311 LFEDGEAGFRGQVALIYQACSNPSIKRLLFSATLANSVEDWCKDHLDNVVRITVGNR 367
>gi|357627267|gb|EHJ77004.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 421
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 119/181 (65%), Gaps = 7/181 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
RQI ACAPTGSGKTAAFL+P++H L P+ G RA+++CPTRELA Q Y E +RLS
Sbjct: 171 NRQIVACAPTGSGKTAAFLMPLLHMLGAPQG-GPRALVLCPTRELANQIYREAIRLSAST 229
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
LR VI ++++ K + +K D++I+TPN+L YLL+ + +N+ V+WL++DE+D
Sbjct: 230 QLRCSVIRSLKESKIKEREATIRKSDLVISTPNRLCYLLKQETVGINMDKVQWLVIDEAD 289
Query: 169 KLFEAG---VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
KLFE V FR QL +I ++C + MFSATHT +AKW R ++ + I VG
Sbjct: 290 KLFEGSQEEVDTFRQQLDIILSSCKS---RLAMFSATHTPSIAKWARHNMRGLINITVGH 346
Query: 226 R 226
R
Sbjct: 347 R 347
>gi|196015875|ref|XP_002117793.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
gi|190579678|gb|EDV19769.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
Length = 369
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/180 (42%), Positives = 122/180 (67%), Gaps = 3/180 (1%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGK+ AF++P++ +L+ +N GFR +I+ PTRELAKQ Y E R++ G G
Sbjct: 67 RELLACAPTGSGKSLAFILPVLLTLKSTQNKGFRTMILSPTRELAKQIYQECNRIALGSG 126
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP---ALNLANVEWLIVDE 166
L+ + + K + FG +S++++D+LI TP++L+ L + +++L++VE LI DE
Sbjct: 127 LKVYYLKKCNATSNNFGLQSSKRYDILIATPSRLIQCLSRNYSTVASIDLSSVELLIFDE 186
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+DK FE+G FR+Q+ +IY C+ P ++R +FSAT + +V WCR L + + VG R
Sbjct: 187 ADKFFESGRSSFREQVGIIYNYCNNPKVRRALFSATLSFEVENWCRSHLDNPLHVIVGRR 246
>gi|390366612|ref|XP_003731077.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Strongylocentrotus purpuratus]
Length = 403
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 93/125 (74%)
Query: 102 VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+RLSEG GLR H I +AA+KFGP +AQKFD+L+TTPN+LVYLLQ DPPA+ L +VEW
Sbjct: 1 MRLSEGSGLRIHTIEHGAKAAQKFGPHTAQKFDILVTTPNRLVYLLQQDPPAIKLNHVEW 60
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
LI+DESDKLFE G GFRDQL +IY AC ++R MFSAT DV +WCR L V +
Sbjct: 61 LIIDESDKLFEEGKTGFRDQLGIIYQACDSSQVRRAMFSATFAYDVEQWCRLNLDNVVTV 120
Query: 222 NVGLR 226
++G R
Sbjct: 121 SIGAR 125
>gi|426348586|ref|XP_004041913.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Gorilla
gorilla gorilla]
Length = 551
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 97/129 (75%)
Query: 98 YNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+ E +++SEG G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L
Sbjct: 203 HRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLT 262
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
+VEWL+VDESDKLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L
Sbjct: 263 SVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDN 322
Query: 218 RVQINVGLR 226
+ +++G R
Sbjct: 323 VISVSIGAR 331
>gi|198426131|ref|XP_002127349.1| PREDICTED: similar to Ddx52 protein [Ciona intestinalis]
Length = 538
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 126/220 (57%), Gaps = 31/220 (14%)
Query: 34 KHFEPHFTITYLSPL----------GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKN 79
K+ F + LSP+ GR+I ACAPTGSGKT AFL+P++ L + K
Sbjct: 104 KNLTERFGFSALSPIQMQAIPAMLDGREILACAPTGSGKTLAFLVPVVSHLLNVKKTKKG 163
Query: 80 LGFRAVIVCPTRELAKQTYNETVRL--SEG-----------LGLRAHVIGKIQQAAEKFG 126
RA+I+ PTRELA+QT++E +L SE L +R ++ EK
Sbjct: 164 KNIRALILSPTRELAEQTFSECKKLIRSENDEENEKIHKDLLNIRLMDKNLVKSFTEK-- 221
Query: 127 PRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVR--GFRDQLAV 184
+ D+LI+TPN++++L++ + P L L ++EWL+VDESDKLFE G FRDQL
Sbjct: 222 KKQTCDIDLLISTPNRIIHLIKQETPILKLDSIEWLVVDESDKLFEDGKEDASFRDQLGR 281
Query: 185 IYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
IY+AC P ++R MFSAT DV +WC + +Q+ VG
Sbjct: 282 IYSACENPKIRRAMFSATFAHDVQQWCVLNMDNVLQVTVG 321
>gi|427781675|gb|JAA56289.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 533
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 120/193 (62%), Gaps = 19/193 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP-------------KNLGFRAVIVCPTRELAKQ 96
R++ CAPTGSGKTAAFLIPII L+ P + GFRAVI+ PTRELA+Q
Sbjct: 135 RELLCCAPTGSGKTAAFLIPIIAQLQKPPLVAKGKKDSTEQQKGGFRAVILAPTRELARQ 194
Query: 97 TYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
TY E ++L GL +++ +A P++ +K D+L+ TPN+L+ L D L L
Sbjct: 195 TYRECLQLIRDTGLHVYLL-SSLSSARSRLPKAQRKLDILVCTPNRLLCL--TDSGVLTL 251
Query: 157 ANVEWLIVDESDKLFE--AGVRGFRDQLAVIYAACSG-PNLKRGMFSATHTEDVAKWCRR 213
VEWLI+DESDKLFE G RGFR+QLA + ACS P ++R +FSAT T+ V WCR
Sbjct: 252 NRVEWLILDESDKLFENAGGPRGFREQLAKVCQACSASPLMRRALFSATATDQVEAWCRL 311
Query: 214 KLKRRVQINVGLR 226
L + + VG+R
Sbjct: 312 HLDAFLSLTVGIR 324
>gi|443900149|dbj|GAC77476.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 586
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 6/154 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A APTGSGKT AFL+P++H LR P GFRAVIV PTRELA+Q +++ RLSEG
Sbjct: 186 RDLLAGAPTGSGKTLAFLLPLLHHLRAPSKEGFRAVIVSPTRELAQQIHDQMRRLSEGRN 245
Query: 110 LRAHVIGKIQQA-AEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
LR V+ K A A P +KFDVLITTP +LV+ ++ + ++L NV L++DE+D
Sbjct: 246 LRICVLTKPADAGAMNADPSKRKKFDVLITTPLRLVHAVEKE--EVDLGNVRHLVLDEAD 303
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+L E GF +Q I AACS P L++ +FSAT
Sbjct: 304 RLLED---GFLEQTDAILAACSHPELRKALFSAT 334
>gi|339234397|ref|XP_003382315.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
gi|316978689|gb|EFV61638.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
Length = 627
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR++ A APTGSGKT AFLIP ++ L +N+ R +I+ PT EL+KQ Y E ++L+
Sbjct: 218 GREVMASAPTGSGKTLAFLIPAVNFLLTECESENI-LRILIIEPTYELSKQVYLELLKLT 276
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+GL ++ H+ Q ++ + FD+++TTPN+L+Y Q P NL + WLI+D
Sbjct: 277 DGLNVKVHLTSNAPQLEDE-NNFDKENFDIMVTTPNRLIYAQQQSQPLYNLNTIRWLIID 335
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E DKLFE+G RGFR Q C ++R +FSAT + ++ +WC+ L V + VG
Sbjct: 336 ECDKLFESGDRGFRKQ------QCDTVKIRRLLFSATFSYELEQWCKINLNDMVMVCVGA 389
Query: 226 R 226
R
Sbjct: 390 R 390
>gi|384487383|gb|EIE79563.1| hypothetical protein RO3G_04268 [Rhizopus delemar RA 99-880]
Length = 546
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 114/179 (63%), Gaps = 6/179 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + +CAPTGSGKT A+++PI+ L+ P K +RA+I+ PTRELA+Q E L++
Sbjct: 177 GRDLMSCAPTGSGKTMAYVLPILQDLKKPEKKTSYRALIIAPTRELAQQIAREATILAQD 236
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR +V+ K A + P S QKFD+L+TTP +LVY ++ ++L+ V L++DE+
Sbjct: 237 TKLRINVLSKATAADKSQTPESRQKFDILVTTPLRLVYAIK--EKEVDLSAVRHLVLDEA 294
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
DKL + +GF DQ I+AACS +++ +FSAT + V + + +K ++I +G +
Sbjct: 295 DKLLD---QGFLDQTDEIFAACSSTTIQKSLFSATFSSHVEELAKSVMKDPIRIVIGAK 350
>gi|440804141|gb|ELR25019.1| DEAD/DEAH box helicase [Acanthamoeba castellanii str. Neff]
Length = 643
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 7/178 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKTAA+++PI+ L+ P+ +GFRAVIV PTRELA+Q Y E +LS+G
Sbjct: 255 GRELMAIAPTGSGKTAAYVLPILSKLKQPEKVGFRAVIVSPTRELAQQIYRELRKLSKGK 314
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R V+ K F S +FD+L+TTP +LV+LL+ + +L L +V+ L++DE+D
Sbjct: 315 EFRICVLTKANANENSFS--STTRFDILVTTPMRLVHLLRTE--SLKLDSVQHLVLDEAD 370
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KL + GF +Q+ I AAC+ ++R ++SAT + V R L+ V + +G R
Sbjct: 371 KLLDM---GFMEQVDEIIAACTNQAVQRSLWSATMSPIVEDLARTFLRDPVHLTIGTR 425
>gi|328773151|gb|EGF83188.1| hypothetical protein BATDEDRAFT_29188 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R++ ACAPTGSGKT AFL+PI+H L+GP GFRA+I+ PTRELA+QTY E +LS G
Sbjct: 65 NREVMACAPTGSGKTLAFLLPILHDLKGPTKEGFRALIIAPTRELAQQTYRELKKLSVGK 124
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-----LLQMDPPALNLANVEWLI 163
+ V+ K A + + FD+LI+TP +LV +Q+D + V L+
Sbjct: 125 PFKTCVLTKATNATNPDVSSTLKNFDILISTPLRLVTAIKENAIQLDKQVYRIL-VRHLV 183
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+DKL E GF +Q+ I+AACS L++ +FSAT + + R +K ++I V
Sbjct: 184 LDEADKLLEL---GFLEQVDEIFAACSSTTLQKSLFSATMPSGIEQLARTIMKDPIRIIV 240
Query: 224 GLR 226
G +
Sbjct: 241 GCK 243
>gi|388578850|gb|EIM19183.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A APTGSGKT A+L+P++HSL PK GFRAVI+ PTRELA+Q NE R+ G
Sbjct: 25 RDLLAVAPTGSGKTLAYLLPLLHSLGEPKKEGFRAVIISPTRELAQQIRNELARVGIGRR 84
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R V+ K QA K P + K D+LI+TP +L + ++ + ++L+NV LI+DE+D+
Sbjct: 85 WRISVLSKANQATMKSDPSTRSKHDILISTPLRLKHAIETE--EVDLSNVRHLILDEADR 142
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
L E GF DQ+ I ACS ++++ +F+AT V + + L+ V++ +G
Sbjct: 143 LLEM---GFIDQVDTIVGACSHSSIRKSLFTATLPASVEEVSQNILRMPVRMIIG 194
>gi|388857203|emb|CCF49216.1| probable ROK1-ATP-dependent RNA helicase [Ustilago hordei]
Length = 593
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 103/155 (66%), Gaps = 7/155 (4%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A APTGSGKT AFL+P++H LR P K+ FRAVIV PTRELA+Q Y + RLSE
Sbjct: 199 RDLLAGAPTGSGKTLAFLLPLLHHLRSPNKSEHFRAVIVSPTRELAQQIYEQLRRLSEAQ 258
Query: 109 GLRAHVIGKIQQ-AAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
R V+ KI A P +KFD+LITTP +LV+ ++ + ++L+NV L++DE+
Sbjct: 259 NFRICVLTKIADINAHVSDPSKRKKFDILITTPLRLVHAVEKE--EVDLSNVRHLVLDEA 316
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+L E GF +Q I AACS P+L++ +FSAT
Sbjct: 317 DRLLED---GFLEQTDSILAACSHPHLRKALFSAT 348
>gi|281209492|gb|EFA83660.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 880
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGKTAAF IPI+H+L P+ +GFRAVI+ PTRELA+Q Y + S+G
Sbjct: 423 REVIACAPTGSGKTAAFTIPILHTLNKPQKVGFRAVIISPTRELAQQIYRQFRLFSKGKP 482
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R V+ K + K P S + FD+LITTP +LV+L++ + +NL VE L+ DE+DK
Sbjct: 483 FRICVLTKGLSQSNKAEPFS-KTFDILITTPLRLVHLIKEE--NVNLNKVEHLVFDEADK 539
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
LF+ + F +Q+ + AC LK +FSAT V R + ++I +G
Sbjct: 540 LFD---QQFVEQVDDVVNACKNKKLKISLFSATMNNLVEDMARSIMNNPIKIVIG 591
>gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690413|gb|EDQ76780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+ FACAPTGSGKT AF +PI+ LR P G RA+++CPTRELA QT E +L+ G
Sbjct: 62 RECFACAPTGSGKTLAFSLPILMKLRVPSKEGLRALVLCPTRELALQTTRELKKLTVGTK 121
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R V+ K F S D+L++TP +L LL+ ++L+ VE+L++DESDK
Sbjct: 122 FRVRVMTKALALCNDF---SNLPCDILVSTPLRLDALLKGS--KIDLSKVEFLVLDESDK 176
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE GF +Q+ + AAC+ P + R +FSAT + V + R + ++I +G R
Sbjct: 177 LFEM---GFVEQIDSVVAACTNPKIVRTLFSATLPDTVEELARSIMHDAIRITIGER 230
>gi|71021341|ref|XP_760901.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
gi|46100997|gb|EAK86230.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
Length = 1448
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/160 (47%), Positives = 100/160 (62%), Gaps = 11/160 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A APTGSGKT AFL+P+IH LR P + FRAVIV PTRELA+Q Y++ RLSEG
Sbjct: 1031 NRDLLAGAPTGSGKTLAFLLPLIHHLRTPCRKEHFRAVIVSPTRELAQQIYDQLRRLSEG 1090
Query: 108 LGLRAHVIGKIQQAAEKFGPRSA-----QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
R V+ A SA +K+DVLITTP +LV+ ++ + + L+NV L
Sbjct: 1091 QNFRICVLTSTSDATAVANSSSADASKRKKYDVLITTPLRLVHAIEKE--QVELSNVRHL 1148
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
++DE+D+L E GF Q I AACS P L++ +FSAT
Sbjct: 1149 VLDEADRLLED---GFLQQTDSILAACSHPQLRKALFSAT 1185
>gi|328870357|gb|EGG18732.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 734
Score = 132 bits (332), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 108/176 (61%), Gaps = 7/176 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ ACAPTGSGKTAAF IPI+ SL PK LGFR VIV PTRELA+Q Y S+G
Sbjct: 285 GREVIACAPTGSGKTAAFSIPILQSLHEPKKLGFRCVIVSPTRELAQQIYRNFRLFSKGK 344
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ V+ K + ++ P S + FD+LITTP ++V L+Q LN +VE L+ DE+D
Sbjct: 345 PFKICVLSKT-VSGDQMAPIS-KNFDILITTPQRIVNLIQSRVVKLN--HVEHLVFDEAD 400
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLF+ F +Q+ + AC +LK +FSAT V + R +K +++ +G
Sbjct: 401 KLFDD---QFLEQVDSVINACKNASLKIHLFSATMNVVVEEMARSIMKNPIKVLIG 453
>gi|66820759|ref|XP_643949.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
gi|74927179|sp|Q86IZ9.1|DDX52_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx52; AltName:
Full=DEAD box protein 52
gi|60472102|gb|EAL70055.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
Length = 668
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 12/178 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ A APTGSGKTA+F IPI+ +L PK GFR+VI+ PTRELA+Q Y LS+G
Sbjct: 237 REVVAIAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPTRELAQQIYRNFRLLSKGKP 296
Query: 110 LRAHVIGK---IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
R V+ K Q E + +D+LITTP +LVYL++ + L+L VE+L+ DE
Sbjct: 297 FRICVLSKNLHNQSTNENL----IKNYDILITTPLRLVYLIKEN--LLSLNKVEYLVFDE 350
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+DKLF+ + F++Q+ ++ AC P LK +FSAT + V + +K ++I +G
Sbjct: 351 ADKLFD---KNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG 405
>gi|330790576|ref|XP_003283372.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
gi|325086637|gb|EGC40023.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
Length = 462
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 106/178 (59%), Gaps = 12/178 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A APTGSGKTAAF IPI+ +LR PK GFR+VI+ PTRELA+Q Y LS+G
Sbjct: 89 RDVVAIAPTGSGKTAAFSIPILSALREPKKEGFRSVIIAPTRELAQQIYRNFRLLSKGKP 148
Query: 110 LRAHVIGK---IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
R V+ K Q E + +D+LITTP +LVYL++ + L L NVE+L+ DE
Sbjct: 149 FRICVLSKNLHNQSTDESL----IKNYDILITTPLRLVYLIKEN--VLKLNNVEYLVFDE 202
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+DKLF+ R F +Q+ + AC LK +FSAT V + +K ++I +G
Sbjct: 203 ADKLFD---RDFVEQIDDVVTACQNQKLKICLFSATMNTLVEELANSIMKNPIKITIG 257
>gi|343426178|emb|CBQ69709.1| probable ROK1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 614
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 103/169 (60%), Gaps = 11/169 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A APTGSGKT AFL+P+IH LR P K FRAVIV PTRELA+Q Y++ RLSEG
Sbjct: 209 RDLLAGAPTGSGKTLAFLLPLIHHLRAPSKKEHFRAVIVSPTRELAQQIYDQLRRLSEGR 268
Query: 109 GLRAHVIGKI-----QQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
R V+ K A P +KFDVLITTP +LV+ ++ + ++L+NV L+
Sbjct: 269 NFRICVLTKTSDASAVANASSADPSKRKKFDVLITTPLRLVHAVEKEE--VDLSNVRHLV 326
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+DE+D+L E GF Q I AACS L++ +FSAT V + R
Sbjct: 327 LDEADRLLE---EGFLAQTDTILAACSHARLRKALFSATLLAGVEEMAR 372
>gi|449516225|ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like, partial
[Cucumis sativus]
Length = 441
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 104/176 (59%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+CPTRELA QT E +L++G
Sbjct: 201 GRECFACAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGK 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ K F S DVLI+TP +L L + ++L+ VE+L++DESD
Sbjct: 261 KFHIKLVTKEVLRHADFSKFSC---DVLISTPLRL--RLAIRKKKIDLSRVEYLVLDESD 315
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE G+ Q+ + ACS P++ R +FSAT + V R + V++ VG
Sbjct: 316 KLFELGLIK---QIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVG 368
>gi|406607780|emb|CCH40885.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 559
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 107/180 (59%), Gaps = 8/180 (4%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
R + ACAPTGSGKT AF+IP+I L KN G R +I+ PT+ELA+Q Y E +L
Sbjct: 150 FDRDVLACAPTGSGKTLAFIIPLIQQLINSNKQKNSGLRGLIISPTKELAQQIYEECNKL 209
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S L L+ ++ K + K K+D++I+TP +L+ L++ + AL+L+ VE LI
Sbjct: 210 SSKLPLKVAILSKSISSKLKNKIIKKDKYDIIISTPLRLIDLVKNE--ALDLSKVEHLIF 267
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+DKLF+ + F +Q I C P L++ MFSAT +V + + ++ +++ +G
Sbjct: 268 DEADKLFD---KNFLEQTDDILTQCKNPRLRKSMFSATIPSNVEEIANQIMQNTIRLIIG 324
>gi|428174311|gb|EKX43208.1| hypothetical protein GUITHDRAFT_158075 [Guillardia theta CCMP2712]
Length = 464
Score = 125 bits (315), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 106/178 (59%), Gaps = 9/178 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AF+IP+ L+ PK G R +IV PTRELA Q +N+ L
Sbjct: 75 RDLVACAPTGSGKTGAFVIPLFALLQAPKKEGIRGLIVSPTRELATQIFNQCKLLKAFSK 134
Query: 110 LRAHVIGKIQQ---AAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
L+ ++ K AA + P+ A+ DV+++TP +LV LLQ +L+L++VE LIVDE
Sbjct: 135 LQVKLLTKATAASVAALQMDPQ-ARNHDVVVSTPARLVSLLQQK--SLDLSSVELLIVDE 191
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+DKLFE GF QL I AACS L++ +FSAT + + R + + VG
Sbjct: 192 ADKLFE---EGFITQLDEILAACSNRKLQKSLFSATIPPQIEELARSIMPHPTFVTVG 246
>gi|390363099|ref|XP_003730297.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Strongylocentrotus purpuratus]
Length = 448
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/84 (66%), Positives = 69/84 (82%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ ACAPTGSGKTAAFL+PI+H L+GP+ GFRAV+V PTREL++QTY E +RLSEG G
Sbjct: 157 RELLACAPTGSGKTAAFLLPILHQLKGPQKKGFRAVVVSPTRELSQQTYRELMRLSEGSG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKF 133
LR H I +AA+KFGP +AQKF
Sbjct: 217 LRIHTIEHGAKAAQKFGPHTAQKF 240
>gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
gi|300145491|gb|EFJ12167.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
Length = 415
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+ F CAPTGSGK+ AF++PI+ L+ G RAVI+CPTRELA Q E RL+ G
Sbjct: 61 RECFVCAPTGSGKSLAFILPILMKLKKSSPDGIRAVILCPTRELAAQLITECRRLANGSK 120
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
+RA ++ K F ++ + D+L++TP +L L++ + ++L VE+ I+DESDK
Sbjct: 121 IRARLLTKRLFKNPDF---ASLRCDILVSTPLRLDKLVKSE--KIDLKRVEYFILDESDK 175
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE GF Q+ I +AC+ N+ R +FSAT E V + R + ++I +G R
Sbjct: 176 LFEL---GFMQQIDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAIRIVIGDR 229
>gi|344255681|gb|EGW11785.1| putative ATP-dependent RNA helicase DDX52 [Cricetulus griseus]
Length = 507
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 70/93 (75%)
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
D+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESDKLFE G GFRDQLA I+ AC+
Sbjct: 96 DILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHK 155
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+KR MFSAT DV +WC+ L V +++G R
Sbjct: 156 VKRAMFSATFAYDVEQWCKLNLDNVVTVSIGAR 188
>gi|449440077|ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
sativus]
Length = 616
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 8/178 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+CPTRELA QT E +L++G
Sbjct: 175 GRECFACAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGK 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ K F S DVLI+TP +L L + ++L+ VE+L++DESD
Sbjct: 235 KFHIKLVTKEVLRHADFSKFSC---DVLISTPLRL--RLAIRKKKIDLSRVEYLVLDESD 289
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+ Q+ + ACS P++ R +FSAT + V R + V++ VG +
Sbjct: 290 KLFELGLIK---QIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRK 344
>gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|125601315|gb|EAZ40891.1| hypothetical protein OsJ_25369 [Oryza sativa Japonica Group]
Length = 540
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL PI+ ++ G +AVI+CPTRELA QT E +L++G
Sbjct: 183 GRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKG- 241
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R I + + K G D+LI+TP +L + +Q L+L+ VE+L++DESD
Sbjct: 242 --RKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRD--LDLSRVEYLVLDESD 297
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + V++ VG
Sbjct: 298 KLFEL---GFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVG 350
>gi|320583779|gb|EFW97992.1| ATP-dependent RNA helicase ROK1 [Ogataea parapolymorpha DL-1]
Length = 547
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 10/178 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + CAPTGSGKT AFLIP++ L +G KN G R +++ PT+ELA Q +NE +L +G
Sbjct: 151 RDLICCAPTGSGKTLAFLIPMVQQLGKGRKNHGIRGLVISPTKELAAQIFNELTKLCKGS 210
Query: 109 GLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
L+ ++ K A K R ++ KFD+L++TP +L+ L+ + ++L+ VE ++ DE
Sbjct: 211 SLQIGILNK--SIAGKLRNRVLASSKFDILVSTPLRLIDLIGDE--VMDLSKVEEVVFDE 266
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DKLFE+ F +Q I ACS P L+R +FSAT T V + + ++I +G
Sbjct: 267 VDKLFES---KFVEQTDRILTACSNPKLRRSIFSATITSSVEELANSIMNSPIRIIIG 321
>gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group]
Length = 540
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 105/176 (59%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL PI+ ++ G +AVI+CPTRELA QT E +L++G
Sbjct: 183 GRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKG- 241
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R I + + K G D+L++TP +L + +Q L+L+ VE+L++DESD
Sbjct: 242 --RKFYIKLMTKDLSKSGNFKDMHCDILVSTPLRLDHAVQKRD--LDLSRVEYLVLDESD 297
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + V++ VG
Sbjct: 298 KLFEL---GFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVG 350
>gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 535
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ G RAVI+CPTRELA QT E ++++G
Sbjct: 176 GRECFACAPTGSGKTLAFVCPMLMKLKHSSKDGIRAVILCPTRELASQTTRECKKMAKGN 235
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R ++ K + S D+L++TP +L L + ++L+ VE+L++DESD
Sbjct: 236 KFRIKLMTKELVRTKDL---SRLPCDILVSTPLRL--QLAIRKKKVDLSRVEYLVLDESD 290
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE G+ Q+ ++ ACS P++ R +FSAT E V + R + V++ VG
Sbjct: 291 KLFELGLLK---QIDSVFKACSNPSVIRSLFSATLPESVEELARTIMHDAVRVIVG 343
>gi|213402959|ref|XP_002172252.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
gi|212000299|gb|EEB05959.1| ATP-dependent RNA helicase rok1 [Schizosaccharomyces japonicus
yFS275]
Length = 519
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT A+L PI+ SL+ K+ GFRAVIV PTRELA+Q + RL
Sbjct: 115 RDVLACAPTGSGKTVAYLYPIVRSLQAHKDGGFRAVIVLPTRELAEQVNRQLKRLIARTD 174
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+A K + ++ + + +D+ ++TP +LV+ ++ L+LANVE+L++DE+D+
Sbjct: 175 LKAIFYDKSNEKIQEKNTKLREIYDICVSTPMRLVHAIK---SGLSLANVEFLVLDEADR 231
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
LFE + F +Q + +AC+ P + + +FSAT
Sbjct: 232 LFE---KNFVEQTDGVLSACTHPRICKCLFSAT 261
>gi|293333116|ref|NP_001169206.1| uncharacterized protein LOC100383059 [Zea mays]
gi|223975507|gb|ACN31941.1| unknown [Zea mays]
Length = 364
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL P++ ++ G +AVI+CPTRELA QT E +L +G
Sbjct: 7 GRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLVKG- 65
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R + I + + K G D+L++TP +L + ++ L+L++VE+L++DESD
Sbjct: 66 --RKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRD--LDLSSVEYLVLDESD 121
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + +++ VG
Sbjct: 122 KLFEL---GFVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVG 174
>gi|414591046|tpg|DAA41617.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 414
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL P++ ++ G +AVI+CPTRELA QT E +L +G
Sbjct: 184 GRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLVKG- 242
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R + I + + K G D+L++TP +L + ++ L+L++VE+L++DESD
Sbjct: 243 --RKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRD--LDLSSVEYLVLDESD 298
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + +++ VG
Sbjct: 299 KLFEL---GFVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVG 351
>gi|325180080|emb|CCA14481.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 594
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 108/179 (60%), Gaps = 8/179 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + APTGSGKTAAFLIPI+ L R R++IV PTRELA Q E +L+ G
Sbjct: 204 GRDVLGTAPTGSGKTAAFLIPILMRLARTHTQASIRSIIVSPTRELAVQIQKELRQLTVG 263
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L + V+ K +A F + K D+LI TP +LV+L+Q ++L+ VE + +DE+
Sbjct: 264 YDLHSVVLSKT--SAVNFSEKPFPKIDILIATPLRLVHLIQQ--AKVDLSGVEVITLDEA 319
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D+LFE GF DQ+ I A+C+ P+++R MFSAT + V + L+ +I VG++
Sbjct: 320 DRLFEL---GFIDQIDEIIASCTFPDVQRTMFSATMLQGVEEAAISVLRDPHKIAVGVK 375
>gi|50291793|ref|XP_448329.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661150|sp|Q6FN65.1|ROK1_CANGA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49527641|emb|CAG61290.1| unnamed protein product [Candida glabrata]
Length = 565
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 123/207 (59%), Gaps = 16/207 (7%)
Query: 7 IALGIFTIGFVISIIVTTLAVVSNSIFKHF-EPHFTITYLSPL---GRQIFACAPTGSGK 62
I L I + +IS +++N I HF EP PL GR + ACAPTGSGK
Sbjct: 115 IPLPIGSFEDLISRFSLDKRLLNNLIENHFTEPTPIQCEAIPLCLNGRDLLACAPTGSGK 174
Query: 63 TAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQA 121
T AFLIP++ + KN G + +I+ PT+ELA Q +NE V+LS+ + L ++
Sbjct: 175 TLAFLIPLLQQIIEEKNFSGVKGLIISPTKELATQIFNECVKLSKRIYLDKKRPLQVAIL 234
Query: 122 AEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGV 175
++ G + S +K+D++I+TP +L+ +++ + AL+L+NV+ LI DE+DKLF+
Sbjct: 235 SKSLGAKLRNKVISDKKYDLIISTPLRLIDVVKNE--ALDLSNVKHLIFDEADKLFD--- 289
Query: 176 RGFRDQLAVIYAACSGPNLKRGMFSAT 202
+ F +Q I +C+ P++++ MFSAT
Sbjct: 290 KTFIEQTDDILNSCTDPSMRKSMFSAT 316
>gi|164659482|ref|XP_001730865.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
gi|159104763|gb|EDP43651.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
Length = 557
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 101/153 (66%), Gaps = 7/153 (4%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A APTGSGKT AF++P + L+ + GFRAVIV PTRELA+Q +++ L++G
Sbjct: 159 RDLLAGAPTGSGKTLAFVLPTLQLLKRHQKHGFRAVIVSPTRELAQQIFSQLQLLADGEA 218
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R ++ + +A + +KFD+LITTP +LV+ ++ + L+L+ VE L++DE+D+
Sbjct: 219 FRTCLLTNVTKATSDSIKK--KKFDILITTPLRLVHSIEHE--ELDLSQVELLVLDEADR 274
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L E GF +Q I AAC+ P+L++ +FSAT
Sbjct: 275 LLEL---GFLEQTDAILAACTNPSLRKALFSAT 304
>gi|414887918|tpg|DAA63932.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 541
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL P++ ++ G +AVI+CPTRELA QT E +L +G
Sbjct: 184 GRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLVKG- 242
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R + I + + K G D+L++TP +L + ++ L+L++VE+L++DESD
Sbjct: 243 --RKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRD--LDLSSVEYLVLDESD 298
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + +++ VG
Sbjct: 299 KLFEL---GFVEVVDSVVEACSNPSIIRSLFSATLPDSIETLARTIMHDAIRVIVG 351
>gi|254571881|ref|XP_002493050.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|238032848|emb|CAY70871.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|328352938|emb|CCA39336.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 544
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 6/179 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G I ACAPTGSGKT AFLIP++ L + KN G R +I+ PT+ELA Q +NE ++L++G
Sbjct: 154 GHDIIACAPTGSGKTLAFLIPLVQKLGQNQKNFGIRGLILSPTKELATQIHNELLKLTKG 213
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L ++ K + K+DV+++TP +L+ +++M ++L V+ L++DE+
Sbjct: 214 KNLIIGLLSKSLSGKLRSDLIKGNKYDVMVSTPLRLIEVVRMG--KIDLREVKHLVLDEA 271
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
DKLF F +Q + CS P L+ ++SAT E+V + +K ++IN+G +
Sbjct: 272 DKLFAP---EFLEQTDDVLHNCSNPKLQMSIYSATIPEEVEELAHSVMKEPIRINIGRK 327
>gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ G RAVI+CPTRELA QT E+ +L++G
Sbjct: 164 GRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKG- 222
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ I + + + G S D+LI+TP +L ++ L+L+ VE+L++DESD
Sbjct: 223 --KKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRK--KKLDLSRVEYLVLDESD 278
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE G+ Q+ + ACS P++ R +FSAT + V + R + V++ +G
Sbjct: 279 KLFELGLVK---QIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIG 331
>gi|225439904|ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
Length = 524
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 107/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ G RAVI+CPTRELA QT E+ +L++G
Sbjct: 165 GRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKG- 223
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ I + + + G S D+LI+TP +L ++ L+L+ VE+L++DESD
Sbjct: 224 --KKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRK--KKLDLSRVEYLVLDESD 279
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE G+ Q+ + ACS P++ R +FSAT + V + R + V++ +G
Sbjct: 280 KLFELGLVK---QIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIG 332
>gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
gi|241924516|gb|EER97660.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
Length = 546
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL P++ ++ G +AVI+CPTRELA QT E +L +G
Sbjct: 189 GRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLIKG- 247
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R + I + + K G D+L++TP +L + ++ L+L++VE+L++DESD
Sbjct: 248 --RKYYIKLMTKELSKSGNFKDMHCDILVSTPLRLDHAVKKRD--LDLSSVEYLVLDESD 303
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + + ACS P++ R +FSAT + + R + +++ VG
Sbjct: 304 KLFEL---GFVEVVDSVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVG 356
>gi|147784525|emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
Length = 554
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 108/178 (60%), Gaps = 8/178 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ G RAVI+CPTRELA QT E+ +L++G
Sbjct: 161 GRECFACAPTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKG- 219
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ I + + + G S D+LI+TP +L ++ L+L+ VE+L++DESD
Sbjct: 220 --KKFYIKLLTKELLRSGDISKLPCDILISTPLRLRSAIRK--KKLDLSRVEYLVLDESD 275
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G+ Q+ + ACS P++ R +FSAT + V + R + V++ +G +
Sbjct: 276 KLFELGLVK---QIDAVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRK 330
>gi|254582647|ref|XP_002499055.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
gi|238942629|emb|CAR30800.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
Length = 556
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 110/171 (64%), Gaps = 15/171 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + +CAPTGSGKT AFLIP++ + K++ G + +I+ PT+ELA QT+ E V+LS
Sbjct: 157 GRDLLSCAPTGSGKTLAFLIPLLQQIIDSKDVQGLKGLIISPTKELASQTFVECVKLSRK 216
Query: 108 L------GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L+ ++ K A + S +K+D++I+TP +L+ L++ + AL+L+NV
Sbjct: 217 IFLDKKRPLQVAILSKSLSAKLRNKVVSDKKYDIIISTPLRLIDLVKNE--ALDLSNVRH 274
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
L+ DE+DKLF+ + F +Q I +ACS P L++ MFSAT + E++A+
Sbjct: 275 LVFDEADKLFD---KTFVEQTDDILSACSDPRLRKSMFSATIPSNVEEIAQ 322
>gi|19113945|ref|NP_593033.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175447|sp|Q09775.1|ROK1_SCHPO RecName: Full=ATP-dependent RNA helicase rok1
gi|1008436|emb|CAA91073.1| ATP-dependent RNA helicase Rok1 (predicted) [Schizosaccharomyces
pombe]
Length = 481
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 104/177 (58%), Gaps = 6/177 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT A+L PI+ L+ G+RA+IV PTREL +Q Y + +LS G
Sbjct: 84 RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYRQAEKLSFGTS 143
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+ + K + ++ P+ +K+D+ I TP +LV +Q L+ VE+ ++DE+D+
Sbjct: 144 LKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQT---GLSFEKVEFFVMDEADR 200
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE GF +Q I +AC+ N+ + +FSAT V + + ++I VGL+
Sbjct: 201 LFEP---GFIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVDPIRIIVGLK 254
>gi|357121693|ref|XP_003562552.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like
[Brachypodium distachyon]
Length = 539
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 8/176 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AFL+P++ ++ G +AVI+CPTRELA QT E +L++G
Sbjct: 182 GRECFACAPTGSGKTLAFLLPMLMKIKPGSKGGVKAVILCPTRELAAQTTRECKKLAKG- 240
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R + + + + G D++++TP +L + ++ L+L+ VE+L++DESD
Sbjct: 241 --RKFSVKLMTKDLSQDGNFKDMHCDIVVSTPLRLDHAVKKRD--LDLSRVEYLVLDESD 296
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE GF + + I ACS P++ R +FSAT E + R + V++ VG
Sbjct: 297 KLFEL---GFVEVIDSIVKACSSPSIIRSLFSATLPETIEALARTIMHDAVRVIVG 349
>gi|324507437|gb|ADY43153.1| ATP-dependent RNA helicase DDX52 [Ascaris suum]
Length = 593
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 117/239 (48%), Gaps = 33/239 (13%)
Query: 11 IFTIGFVIS---IIVTTLAVVSNSIFKHFEPHFTITYLSPLG----------RQIFACAP 57
I+T G I I T L + + K+ F I SP+ R + A AP
Sbjct: 115 IYTWGDNIPDPCINFTDLKGIPKELLKNLN-EFDINEPSPIQMQAMPIMHERRDLLASAP 173
Query: 58 TGSGKTAAFLIPIIHSLRGPKNL-------GFRAVIVCPTRELAKQTYNETVRLSEGLGL 110
TGSGKT AF IPII + K L A+I+ PT+EL+KQTY + ++ + L +
Sbjct: 174 TGSGKTLAFAIPIILDIIRLKKLPKYQQGKKLLALILEPTKELSKQTYMQFLKFGQNLPI 233
Query: 111 RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
++ G D++++TP ++ + ++ +P + WLIVDESD+L
Sbjct: 234 SCTLMQ---------GQELPNDADIIVSTPKRMEFFIENNPSDSTFKWLRWLIVDESDRL 284
Query: 171 FE---AGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
FE R FR QLA +Y AC+G RG FSAT + +V +WC+ L + VG R
Sbjct: 285 FETTEGDSRCFRTQLAKVYQACNGKYTHRGFFSATFSYEVEEWCKTNLHNVAMVCVGAR 343
>gi|308801667|ref|XP_003078147.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116056598|emb|CAL52887.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 418
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 106/177 (59%), Gaps = 12/177 (6%)
Query: 51 QIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL-G 109
++ A APTGSGKT AFL+PII L+ K G RA+++ PT+ELA Q+ LS G+ G
Sbjct: 157 ELLAIAPTGSGKTLAFLLPIIMKLKAHKEGGARALLLAPTKELASQSARILRLLSRGVSG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L++ ++ K A F K DV++ TP +L LLQ D +NL+ V +L++DE+DK
Sbjct: 217 LKSCLLSKA-TAGNDFS-----KVDVVVATPMRLKILLQDDK--INLSKVLYLVLDEADK 268
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE GF +Q+ + AAC + R +FSAT E V + R + R +++ VG R
Sbjct: 269 LFEM---GFVEQIDAVVAACDNKKITRALFSATLPEKVEELARSVMPRPIRLTVGER 322
>gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
gi|297330590|gb|EFH61009.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 8/178 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+ P RELA QT E +L +G
Sbjct: 176 GRECFACAPTGSGKTVAFICPMLIKLKHPSTDGIRAVILSPARELAAQTAREGKKLIKGS 235
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ K F S + DVLI+TP +L ++ ++L+ VE+L++DESD
Sbjct: 236 NFHIRLMTKPLVKTADF---SKLRCDVLISTPMRLKRAIKAK--KIDLSKVEYLVLDESD 290
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE + Q+ + ACS P++ R +FSAT + V + R + V++ +G +
Sbjct: 291 KLFE---QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRK 345
>gi|294657726|ref|XP_460025.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
gi|218511815|sp|Q6BP45.2|ROK1_DEBHA RecName: Full=ATP-dependent RNA helicase ROK1
gi|199432904|emb|CAG88281.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
Length = 550
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 112/182 (61%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGP--KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + ACAPTGSGKT AFLIP++ ++ P KN G R +I+ PT ELA Q + E +
Sbjct: 151 GRDLIACAPTGSGKTLAFLIPLVQTILQSNPNVKNYGIRGLIISPTNELAVQIFQELNTM 210
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++G ++ ++ K Q A K + ++ K+D+L++TP +L+ ++ + ++L+ VE L
Sbjct: 211 TKGKKMKIGILSK--QLANKINNKIINSSKYDILVSTPLRLIDSIKNE--TISLSKVEQL 266
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+DKLF+ +GF +Q I + C+ L++ MFSAT V + + +K +++
Sbjct: 267 VIDETDKLFD---QGFVEQTDEILSNCTNTKLRKSMFSATIPSGVEEMAQSIMKDPIRVI 323
Query: 223 VG 224
+G
Sbjct: 324 IG 325
>gi|301112328|ref|XP_002905243.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095573|gb|EEY53625.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 709
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPK--NLGFRAVIVCPTRELAKQTYNETVRLS 105
L R + A APTGSGKTAAF IPI+ +L + G R++++ PTR+LA Q E RL+
Sbjct: 284 LRRDVLATAPTGSGKTAAFAIPILANLAAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLA 343
Query: 106 EGLGLRAHVIGKIQQA--AEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
G L ++ K A A + + A DVLI TP +LV+L+Q ++L+ VE +
Sbjct: 344 AGKKLHITLLSKATAATIASQTKSKLAVNHDVLIATPLRLVHLIQ--ESKVDLSTVEMVC 401
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D+L E G F +Q+ I+AAC+ P ++R MFSAT E V + + L+ V++ V
Sbjct: 402 LDEADRLLELG---FVEQVDEIFAACTHPKVQRAMFSATMLEGVEELAQTVLRDPVKVAV 458
Query: 224 GLR 226
G +
Sbjct: 459 GTK 461
>gi|366990303|ref|XP_003674919.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
gi|342300783|emb|CCC68547.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
Length = 563
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 19/196 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LG 81
+++N I HF EP PL GR I ACAPTGSGKT AFLIP+ + K+ LG
Sbjct: 136 LLNNLIENHFTEPTPIQCESLPLALHGRDILACAPTGSGKTLAFLIPLFQQIINEKDTLG 195
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFDV 135
+ +I+ PT+ELA Q + E V+LS + L+ ++ K A K + +K+D+
Sbjct: 196 LKGLIISPTKELANQIFLECVKLSNRIYLDKKRPLQVALLSKSLSAKLKNKVINDKKYDL 255
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+ITTP +L+ L++ + AL+L+ V+ LI DE+DKLF+ + F +Q I +C+ P L+
Sbjct: 256 IITTPLRLIDLVKSE--ALDLSKVKHLIFDEADKLFD---KTFVEQADDILNSCTDPVLR 310
Query: 196 RGMFSAT---HTEDVA 208
+ MFSAT + E++A
Sbjct: 311 KAMFSATIPSNVEEIA 326
>gi|152060505|sp|A5DIX5.2|ROK1_PICGU RecName: Full=ATP-dependent RNA helicase ROK1
Length = 537
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 46 SPLGRQIFACAPTGSGKTAAFLIPIIHSL-RGP--KNLGFRAVIVCPTRELAKQTYNETV 102
S GR + ACAPTGSGKT A+LIP+ +L P KN G R V++ PT ELA Q Y
Sbjct: 140 SAEGRDLIACAPTGSGKTLAYLIPMAQALISSPKTKNYGIRGVVIAPTNELAIQIYQTLA 199
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ G L ++ K + SA KFDVLI TP +L+ L++ + ++L+ VE L
Sbjct: 200 PMCRGSNLNVTLLSKQVASKISSSIISANKFDVLICTPLRLIDLVKKE--QVDLSKVEHL 257
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+DKLF+ GF +Q I + C+ P + MFSAT V + +K +++I
Sbjct: 258 VIDEADKLFD---HGFVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSIMKDQIRII 314
Query: 223 VG 224
VG
Sbjct: 315 VG 316
>gi|190346939|gb|EDK39127.2| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 46 SPLGRQIFACAPTGSGKTAAFLIPIIHSL-RGP--KNLGFRAVIVCPTRELAKQTYNETV 102
S GR + ACAPTGSGKT A+LIP+ +L P KN G R V++ PT ELA Q Y
Sbjct: 279 SAEGRDLIACAPTGSGKTLAYLIPMAQALISSPKTKNYGIRGVVIAPTNELAIQIYQTLA 338
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ G L ++ K + SA KFDVLI TP +L+ L++ + ++L+ VE L
Sbjct: 339 PMCRGSNLNVTLLSKQVASKISSSIISANKFDVLICTPLRLIDLVKKE--QVDLSKVEHL 396
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+DKLF+ GF +Q I + C+ P + MFSAT V + +K +++I
Sbjct: 397 VIDEADKLFD---HGFVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSIMKDQIRII 453
Query: 223 VG 224
VG
Sbjct: 454 VG 455
>gi|146419062|ref|XP_001485496.1| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 8/182 (4%)
Query: 46 SPLGRQIFACAPTGSGKTAAFLIPIIHSL-RGP--KNLGFRAVIVCPTRELAKQTYNETV 102
S GR + ACAPTGSGKT A+LIP+ +L P KN G R V++ PT ELA Q Y
Sbjct: 279 SAEGRDLIACAPTGSGKTLAYLIPMAQALISSPKTKNYGIRGVVIAPTNELAIQIYQTLA 338
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ G L ++ K + SA KFDVLI TP +L+ L++ + ++L+ VE L
Sbjct: 339 PMCRGSNLNVTLLSKQVASKISSSIISANKFDVLICTPLRLIDLVKKE--QVDLSKVEHL 396
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+DKLF+ GF +Q I + C+ P + MFSAT V + +K +++I
Sbjct: 397 VIDEADKLFD---HGFVEQTDEILSHCTLPTRRTSMFSATIPSGVEEMANSIMKDQIRII 453
Query: 223 VG 224
VG
Sbjct: 454 VG 455
>gi|357510607|ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355500607|gb|AES81810.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 105/178 (58%), Gaps = 8/178 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R+ FACAPTGSGKT AF+ P++ L+ G RAVI+C +REL+ QTY E +L++G
Sbjct: 170 DRECFACAPTGSGKTLAFVCPMLMKLKAHAKGGVRAVIICHSRELSGQTYRECKKLAKGE 229
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R ++ K F S D+LI+TP +L L + ++L+ VE+L++DESD
Sbjct: 230 KFRIKLMTKNLLRNADFSKFSC---DILISTPLRLC--LAIKKKKVDLSRVEYLVLDESD 284
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE + F+ Q+ I AC+ P++ R +FSAT + V R + V++ VG +
Sbjct: 285 KLFEPQL--FK-QIDSIIKACTNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVGRK 339
>gi|126275853|ref|XP_001386913.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|146325686|sp|A3GHW9.1|ROK1_PICST RecName: Full=ATP-dependent RNA helicase ROK1
gi|126212782|gb|EAZ62890.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 558
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 110/185 (59%), Gaps = 14/185 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RG-PKNLGFRAVIVCPTRELAKQTYNETVR 103
GR + ACAPTGSGKT AFLIP+I SL +G PKN G +++ PT ELA Q + E
Sbjct: 157 GRDLIACAPTGSGKTLAFLIPLIQSLLVSSKGRPKNYGITGLVISPTNELAIQIFQELQI 216
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L+ G L ++ K Q A K A K+D++++TP +L+ +++ + ++L+ VE
Sbjct: 217 LTRGKKLNVAILSK--QLANKLNNDIVKASKYDIIVSTPLRLIDIVKNE--KVDLSKVEQ 272
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+DKLF+ +GF +Q I + C+ +++ MFSAT V + ++ +++
Sbjct: 273 LVIDEADKLFD---QGFVEQTDDILSHCTYTKIRKSMFSATIPSGVEEMAHSIMRDPIRV 329
Query: 222 NVGLR 226
+G +
Sbjct: 330 IIGRK 334
>gi|224127806|ref|XP_002329182.1| predicted protein [Populus trichocarpa]
gi|222870963|gb|EEF08094.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 96/164 (58%), Gaps = 9/164 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FA APTGSGKT AF+ P++ L+ P G R VI+C TRELA QT E ++++G
Sbjct: 170 GRECFAKAPTGSGKTLAFVYPMLMKLKQPSKDGIRTVILCHTRELAAQTTRECKKMAKGS 229
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
R ++ K F + D+LI+TP +L + ++L+ VE+L++DESD
Sbjct: 230 KFRIKLMTKELLRNTDF---TKLPCDILISTPRRLQLCICKKKKKIDLSRVEYLVLDESD 286
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
KLFE R +Q + ACS P++ R +FSAT EDVA+
Sbjct: 287 KLFE---RSLLEQTDSVVKACSNPSIIRSLFSATLPGFVEDVAR 327
>gi|444720987|gb|ELW61747.1| Synergin gamma [Tupaia chinensis]
Length = 2242
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 64/178 (35%), Positives = 86/178 (48%), Gaps = 54/178 (30%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 255 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 314
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+ S
Sbjct: 315 GFRIHMIHKAAVAAKKFGPK--------------------------------------SS 336
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
K F AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 337 KKF----------------ACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 378
>gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
gi|75328099|sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|29028778|gb|AAO64768.1| At3g09720 [Arabidopsis thaliana]
gi|110742885|dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332641282|gb|AEE74803.1| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
Length = 541
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 8/178 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+ P RELA QT E +L +G
Sbjct: 178 GRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGS 237
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ K F S DVLI+TP +L ++ ++L+ VE+L++DESD
Sbjct: 238 NFHIRLMTKPLVKTADF---SKLWCDVLISTPMRLKRAIKAK--KIDLSKVEYLVLDESD 292
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE + Q+ + ACS P++ R +FSAT + V + R + V++ +G +
Sbjct: 293 KLFE---QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIGRK 347
>gi|344302192|gb|EGW32497.1| ATP-dependent RNA helicase ROK1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 546
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 108/185 (58%), Gaps = 10/185 (5%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNET 101
+S R + ACAPTGSGKT AFLIP+I + KN G R +I+ PT ELA Q +N+
Sbjct: 147 ISLSNRDLIACAPTGSGKTLAFLIPLIQKIITEPVGKNHGIRGLIISPTNELAHQIFNQL 206
Query: 102 VRLSEGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+++G R + +Q A K + ++ K+D+++TTP +L+ ++ A++L+ V
Sbjct: 207 EAITKGYSKRLNCAILSKQLANKLNNKIINSSKYDIIVTTPLRLIDIVHNQ--AIDLSKV 264
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
LI+DE+DKLF+ GF +Q I C+ P++++ MFSAT V + +K +
Sbjct: 265 SNLIIDEADKLFD---HGFAEQTDEILTHCTFPHIQKSMFSATIPSGVEEMAHSIMKDPI 321
Query: 220 QINVG 224
++ +G
Sbjct: 322 RVIIG 326
>gi|444317483|ref|XP_004179399.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
gi|387512440|emb|CCH59880.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
Length = 579
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 19/197 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSP---LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LG 81
+++N I HF EP + P L R I ACAPTGSGKT AFLIP++ + K +G
Sbjct: 140 LLNNLIDNHFTEPTPIQSEAIPIALLDRDIVACAPTGSGKTMAFLIPLLQQIIDEKKVVG 199
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFDV 135
+ +I+ PT+ELA Q + E V+LS + L+ ++ K A K S K+D+
Sbjct: 200 LKGLIISPTKELANQIFLECVKLSRSIFFEKKRPLQVALLSKSLSAKLKNKVISNSKYDI 259
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+I+TP +L+ +++ + +L+L+ V+ LI DE+DKLF+ + F +Q I ++C+ P L+
Sbjct: 260 IISTPLRLIDVVRNE--SLDLSKVKHLIFDEADKLFD---KTFVEQTDDILSSCTDPALR 314
Query: 196 RGMFSAT---HTEDVAK 209
+ MFSAT ED+A+
Sbjct: 315 KSMFSATIPSSVEDIAQ 331
>gi|344233769|gb|EGV65639.1| hypothetical protein CANTEDRAFT_129123 [Candida tenuis ATCC 10573]
Length = 556
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 100/168 (59%), Gaps = 12/168 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRLSE 106
R + ACAPTGSGKT A+LIP++ KN G + +I+ PT ELA Q + LS
Sbjct: 157 RDLIACAPTGSGKTLAYLIPLLQKFTATPPVKNSGIKCLIISPTNELATQIFQNLDILSR 216
Query: 107 GLGLRAHVIGKIQQAAEKFGPRS--AQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
G L+ ++ K Q A K +S + K D+L+ TP +L+ L++ + ++NL+ V+ L+V
Sbjct: 217 GFNLKLGILSK--QLANKLTEKSVNSDKHDILVATPLRLIGLIKSE--SINLSKVQNLVV 272
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
DE+DKLFE +GF Q I A+ + N+++ MFSAT V + C+
Sbjct: 273 DEADKLFE---QGFLQQTDTILASLNSKNVQKTMFSATIPSGVEEICQ 317
>gi|336374435|gb|EGO02772.1| hypothetical protein SERLA73DRAFT_176143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387328|gb|EGO28473.1| hypothetical protein SERLADRAFT_458915 [Serpula lacrymans var.
lacrymans S7.9]
Length = 564
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 121/213 (56%), Gaps = 20/213 (9%)
Query: 25 LAVVSNSIFKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGP---- 77
L+ +S++ +KH P +Y P+ GR + A +PTG+GKT ++L+PI+ SL P
Sbjct: 136 LSNLSDNKYKH--PTGIQSYGIPILLEGRDLAAISPTGTGKTLSYLVPIVSSLGRPISSA 193
Query: 78 ---KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KF 133
+ LG RAVI+ PTRELA Q +NE ++L+ G R + K A ++ + K
Sbjct: 194 KNDQGLGVRAVIIAPTRELAHQIHNECLKLTVGRKWRVVLFSKA--TASTLADKTVRDKV 251
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
D++++TP +LV LQ LNL NV L++DE+D+L + F Q+ I A C+ PN
Sbjct: 252 DIIVSTPLRLVASLQAG--NLNLNNVRHLVLDEADRLLDP---EFLSQVQEIVAVCTYPN 306
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+++ +FSAT V L+ +++ VGL+
Sbjct: 307 IQKAVFSATLPAGVEALAMGMLRNPIRVVVGLK 339
>gi|402224639|gb|EJU04701.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 589
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 13/184 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP-------KNLGFRAVIVCPTRELAKQTYNETV 102
R + A APTGSGKT A+L+P+ L P K G RA+IV PTRELA Q +NE +
Sbjct: 173 RDLAAIAPTGSGKTLAYLLPVFCLLGAPGRSGASEKQAGARALIVSPTRELAMQIHNEAL 232
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+L++G + V+ K A + + +K D+LITTP LV L D LNL N+ L
Sbjct: 233 KLAKGRKWKVVVLNKATGNALR-DKAARKKVDLLITTPLSLVSAL--DEGILNLDNIRHL 289
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+D+L E GF Q+ I AACS P +++ +FSAT V L+R +++
Sbjct: 290 ILDEADRLLE---EGFLKQIEAILAACSYPEIQKAVFSATLPAAVEAIANTFLRRPIRVI 346
Query: 223 VGLR 226
VG++
Sbjct: 347 VGVK 350
>gi|145344838|ref|XP_001416931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577157|gb|ABO95224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 474
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 107/179 (59%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G ++ A APTGSGKT AFL+PII L + G RA+++ PT+ELA Q+ LS G+
Sbjct: 62 GSELLAIAPTGSGKTLAFLLPIIMKLGTHEEGGARALLLAPTKELAGQSARILRILSRGV 121
Query: 109 -GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL++ ++ K A F K D+++ TP +L LLQ D ++L+ V +L++DE+
Sbjct: 122 SGLKSCLLTKA-TAGNDF-----SKVDIVVATPMRLKILLQHD--KIDLSKVLYLVLDEA 173
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
DKLFE GF +Q+ + AAC ++ R +FSAT E V + R + R +++ VG R
Sbjct: 174 DKLFEM---GFVEQIDAVVAACDNKDVTRALFSATLPEKVEELARSVMARPIRLTVGER 229
>gi|268567592|ref|XP_002640036.1| Hypothetical protein CBG12508 [Caenorhabditis briggsae]
Length = 573
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 37/239 (15%)
Query: 11 IFTIGFVISIIVTTL--AVVSNSIFKHFEPHFTITYLSP---------LGRQ-IFACAPT 58
IFT G+ + I + +S S+ H + I SP +GR+ I A APT
Sbjct: 113 IFTWGYQLPDIFLRFNDSSLSPSLLTHLSEN-DIRQPSPIQMQAIPFMMGRKNILASAPT 171
Query: 59 GSGKTAAFLIPIIHSLRG-------PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR 111
GSGKT AF +P+I + G K+ A+++ PTRELA QTY E V+ G +
Sbjct: 172 GSGKTLAFALPVIDEILGLKRRADYSKSSKLLAIVLEPTRELAAQTYTEFVKYCSGTSIS 231
Query: 112 -AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
A+ G+ D+L++TPN++V+ L ++ + + WL+VDESD+L
Sbjct: 232 VANFSGEETDITHA---------DILVSTPNRIVFHLD----KIDTSLLRWLVVDESDRL 278
Query: 171 FE---AGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
FE + FR+QL IY AC + FSAT + +V KWC+ ++ + VG R
Sbjct: 279 FEVIEGQEKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKDNIENIGMVCVGER 337
>gi|393911181|gb|EFO18387.2| hypothetical protein LOAG_10109 [Loa loa]
Length = 542
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 101/187 (54%), Gaps = 21/187 (11%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG-------FRAVIVCPTRELAKQTYNETV 102
+ + APTGSGKT AF +PII + K+ AV++ PT ELAKQTY + +
Sbjct: 153 KDLLCSAPTGSGKTLAFALPIIFDVVRCKSHTAEDQYPMLNAVVLEPTYELAKQTYIQFL 212
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ S+ L + + G + +++I+TPNKLV+ L+ + N WL
Sbjct: 213 KFSQNLPVSCCFLE---------GDEIPENANIVISTPNKLVHALKKNNKISTGLN--WL 261
Query: 163 IVDESDKLF---EAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
I+DESD+LF E R FR+Q A IY AC+G ++ R FSAT + +V WC+R L
Sbjct: 262 IIDESDRLFDTTEGNDRCFRNQFATIYQACNGNSVCRAFFSATFSYEVEDWCKRNLCDMA 321
Query: 220 QINVGLR 226
I +G R
Sbjct: 322 MICIGSR 328
>gi|17508543|ref|NP_492326.1| Protein R05D11.4 [Caenorhabditis elegans]
gi|3878881|emb|CAA99891.1| Protein R05D11.4 [Caenorhabditis elegans]
Length = 581
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 28/191 (14%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL---------RGPKNLGFRAVIVCPTRELAKQTYNE 100
R + A APTGSGKT AF +P+I + + AV++ PTRELA QTY E
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTE 223
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSA-QKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ + AA G + Q D+L++TPN++V+ L ++ +++
Sbjct: 224 FLKYCANTSI---------SAANFSGEETDIQHADILVSTPNRIVFHLD----KIDTSSL 270
Query: 160 EWLIVDESDKLFEAGVRG----FRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
WL+VDESD+LFE V G FR+QLA IY AC + FSAT + +V KWC+ +
Sbjct: 271 RWLVVDESDRLFEV-VEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEVEKWCKENI 329
Query: 216 KRRVQINVGLR 226
+ VG R
Sbjct: 330 DEIGMVCVGER 340
>gi|156836663|ref|XP_001642382.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
gi|160358656|sp|A7TT88.1|ROK1_VANPO RecName: Full=ATP-dependent RNA helicase ROK1
gi|156112896|gb|EDO14524.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 570
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 118/197 (59%), Gaps = 19/197 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPLG---RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-G 81
+++N I HF EP PL R + ACAPTGSGKT AFLIP+I + K+ G
Sbjct: 142 LLNNLILNHFTEPTPIQCEAIPLALNNRDMLACAPTGSGKTLAFLIPLIQQVINDKDTQG 201
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFDV 135
+ +I+ PT+ELA Q + E ++LS + L+ ++ K A + S +K+D+
Sbjct: 202 LKGLIISPTKELANQIFLECIKLSNRIFLDKKRPLQVALLSKSLSAKLRNKVISDKKYDI 261
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+++TP +L+ +++ + AL+L+ V+ LI DE+DKLF+ + F +Q I ++CS +L+
Sbjct: 262 IVSTPLRLIDVVKNE--ALDLSQVKHLIFDEADKLFD---KTFVEQSDDILSSCSHSSLR 316
Query: 196 RGMFSAT---HTEDVAK 209
+ MFSAT + E++AK
Sbjct: 317 KSMFSATIPSNVEEIAK 333
>gi|341876893|gb|EGT32828.1| hypothetical protein CAEBREN_25081 [Caenorhabditis brenneri]
Length = 582
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 28/191 (14%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG---------PKNLGFRAVIVCPTRELAKQTYNE 100
R + A APTGSGKT AF +P+I + G K +++ PTRELA QTY E
Sbjct: 166 RNVLASAPTGSGKTLAFALPVIEEVLGLKQRADYSSTKTSKLLVIVLEPTRELAAQTYTE 225
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANV 159
V+ +G + + G D+L++TPN++V+ L ++D AL
Sbjct: 226 FVKYCDGSSIS---VANFSGEETDIGT-----ADILVSTPNRIVFHLDKIDTSALR---- 273
Query: 160 EWLIVDESDKLFEAGVRG----FRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
WLIVDESD+LFE V G FR+QL IY AC + FSAT + +V KWC+ +
Sbjct: 274 -WLIVDESDRLFEV-VEGQDKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKENI 331
Query: 216 KRRVQINVGLR 226
+ VG R
Sbjct: 332 DSIGMVCVGER 342
>gi|341899895|gb|EGT55830.1| hypothetical protein CAEBREN_29719 [Caenorhabditis brenneri]
Length = 582
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 28/191 (14%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG---------PKNLGFRAVIVCPTRELAKQTYNE 100
R + A APTGSGKT AF +P+I + G K +++ PTRELA QTY E
Sbjct: 166 RNVLASAPTGSGKTLAFALPVIEEVLGLKQRADYSSTKTSKLLVIVLEPTRELAAQTYTE 225
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANV 159
V+ +G + + G D+L++TPN++V+ L ++D AL
Sbjct: 226 FVKYCDGSSIS---VANFSGEETDIGT-----ADILVSTPNRIVFHLDKIDTSALR---- 273
Query: 160 EWLIVDESDKLFEAGVRG----FRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
WLIVDESD+LFE V G FR+QL IY AC + FSAT + +V KWC+ +
Sbjct: 274 -WLIVDESDRLFEV-VEGQDKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKENI 331
Query: 216 KRRVQINVGLR 226
+ VG R
Sbjct: 332 DSIGMVCVGER 342
>gi|298708634|emb|CBJ26121.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 516
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 111/191 (58%), Gaps = 17/191 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A APTGSGKTAAF++P+I L P+ G R +++ PTRELA Q + + VRL
Sbjct: 105 GRDLLAAAPTGSGKTAAFVMPMILRLGVQRADPQASGVRGILLAPTRELAAQIHRDVVRL 164
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSA-QKFDVLITTPNKLVYLLQMDPPALNLANV 159
S G LR ++ AA R+A +D++++TP +LV L++ A+ LA+V
Sbjct: 165 SRGRRLRVCLLTKAGATKAAAATGMDSRNALSGYDIVVSTPMRLVALVR--ERAVCLASV 222
Query: 160 EWLIVDESDKLFEAGV------RGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
E +++DE+DKLF+AG + F Q+ + AACS ++R +FSAT + V +
Sbjct: 223 EMVVLDEADKLFDAGAASGGSDKAFIGQVDEVLAACSHQQVQRALFSATVGQQVKELSES 282
Query: 214 KLKRRVQINVG 224
L+ + + VG
Sbjct: 283 VLRDPIFLTVG 293
>gi|403215476|emb|CCK69975.1| hypothetical protein KNAG_0D02250 [Kazachstania naganishii CBS
8797]
Length = 560
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 16/187 (8%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPLG---RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-G 81
+++N + HF EP PL R I AC PTGSGKT AFL+P++ + K + G
Sbjct: 132 LLNNLVENHFTEPTPIQCESIPLALNNRDILACGPTGSGKTLAFLVPLVQQVIDDKEVEG 191
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFDV 135
+ +I+ PT+ELA Q + E +LS + LR ++ K A K S +K+DV
Sbjct: 192 LKGLIISPTKELANQIFIECTKLSHKIFHGKKKPLRVALLSKSLGAKLKNKVVSDKKYDV 251
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+I+TP +L+ +++ + AL+L+ V+ LI DE+DKLF+ + F +Q I ++C+ P+L+
Sbjct: 252 IISTPLRLIDVVKNE--ALDLSRVKHLIFDEADKLFD---KTFVEQTDDILSSCTDPSLR 306
Query: 196 RGMFSAT 202
+ MFSAT
Sbjct: 307 KAMFSAT 313
>gi|367015264|ref|XP_003682131.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
gi|359749793|emb|CCE92920.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
Length = 551
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 113/188 (60%), Gaps = 17/188 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPLG---RQIFACAPTGSGKTAAFLIPIIHSL--RGPKNL 80
+++N I HF EP + PL R I ACAPTGSGKT AFLIP++ + G +
Sbjct: 126 LLNNLIENHFTEPTPIQSEGIPLALNNRDIVACAPTGSGKTLAFLIPLLQLIISDGKDSN 185
Query: 81 GFRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFD 134
G + +I+ PT+ELA Q + E +L++ + L+ ++ K A K S +K+D
Sbjct: 186 GLKGLIISPTKELANQIFIECSKLAQKVFLDRKRPLQVALLSKSLNAKLKNKAVSDKKYD 245
Query: 135 VLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
+L+TTP +L+ +++ + AL+L+ V+ +I DE+DKLF+ + F +Q I ++C+ P L
Sbjct: 246 ILVTTPLRLIDVVKNE--ALDLSGVKHIIFDEADKLFD---KTFVEQTDDILSSCNNPKL 300
Query: 195 KRGMFSAT 202
++ MFSAT
Sbjct: 301 RKSMFSAT 308
>gi|354545812|emb|CCE42540.1| hypothetical protein CPAR2_201830 [Candida parapsilosis]
Length = 568
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 12/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP+I L KN G R +I+ PT ELA Q + E L
Sbjct: 173 NRDLIACAPTGSGKTLAFLIPLIQQLIINHVDKNYGIRGLIISPTNELAVQIFQELETLV 232
Query: 106 EGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
G L ++ K Q A K A K+D++++TP +L+ +++ + ++L+ VE L+
Sbjct: 233 RGKKLTIGILSK--QLASKLNNDIVKASKYDIIVSTPLRLIDIVKNE--KIDLSKVEQLV 288
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+DKLF+ GF +Q I + P +++ MFSAT V + +K +++ +
Sbjct: 289 IDEADKLFD---HGFAEQTDEILNHLTNPKIRKSMFSATIPSGVEEMAHSIMKDPIRVII 345
Query: 224 G 224
G
Sbjct: 346 G 346
>gi|410076108|ref|XP_003955636.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
gi|372462219|emb|CCF56501.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
Length = 571
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 117/199 (58%), Gaps = 21/199 (10%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-G 81
++SN I HF EP P+ R + ACAPTGSGKT +FLIP++ + K G
Sbjct: 138 LLSNLIDNHFTEPTPIQCESLPITLYDRDLLACAPTGSGKTLSFLIPLVQQVINQKEKEG 197
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGLGL---RAHVIGKIQQA-AEKFGPR--SAQKFDV 135
+ +I+ PT+ELA Q Y E ++L+ + L + IG + ++ + KF R + +K+D+
Sbjct: 198 LKGLIISPTKELANQIYMECIKLTNRIFLGKKKPLQIGLLSRSLSAKFKNRVINDKKYDI 257
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+ITTP +L+ LL + AL+L N+ LI DE+DKLF+ + F +Q I + S NLK
Sbjct: 258 IITTPLRLIDLLNAE--ALDLNNLRHLIFDEADKLFD---KTFVEQSDSILSLISAKNLK 312
Query: 196 --RGMFSAT---HTEDVAK 209
+ M+SAT H ED+AK
Sbjct: 313 LRKSMYSATIPSHIEDIAK 331
>gi|358058184|dbj|GAA95976.1| hypothetical protein E5Q_02634 [Mixia osmundae IAM 14324]
Length = 498
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 15/157 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP++ +++ P N RA+++ PTRELA+Q + L+
Sbjct: 132 RDLVACAPTGSGKTLAFLIPLLAAVQSSSSEPSNR-IRALVIEPTRELARQVGRQADLLA 190
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+G G R V+G+ E+ G + D+LITTP +L+Y ++ ++L+ VE LI+D
Sbjct: 191 QGSGWRTCVMGE-----EESGVSESLTADLLITTPLRLIYAIKAK--TVDLSTVEHLILD 243
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE F +Q + AAC+ P L++ +FSAT
Sbjct: 244 EADRLFEL---NFLEQTDELIAACNHPKLRKALFSAT 277
>gi|365983372|ref|XP_003668519.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
gi|343767286|emb|CCD23276.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
Length = 571
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 117/196 (59%), Gaps = 19/196 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPLG---RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LG 81
+++N I HF EP PL R I ACAPTGSGKT AFLIP++ + K LG
Sbjct: 146 LLTNLIENHFTEPTPIQCESIPLALNSRDIVACAPTGSGKTLAFLIPLLQQIINDKETLG 205
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFDV 135
+ +I+ PT+ELA Q + E ++LS + L+ ++ K A K + +K+D+
Sbjct: 206 LKGLIISPTKELANQIFIECIKLSNKIFLDKKRPLQIALLSKSLSAKLKNKVINEKKYDI 265
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+I+TP +L+ +++ + AL+L+ V+ LI DE+DKLF+ + F +Q I ++C+ +L+
Sbjct: 266 IISTPLRLIDVVKNE--ALDLSKVKHLIFDEADKLFD---KTFVEQTDDILSSCTDNSLR 320
Query: 196 RGMFSAT---HTEDVA 208
+ MFSAT + E++A
Sbjct: 321 KAMFSATIPSNVEEIA 336
>gi|308499411|ref|XP_003111891.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
gi|308268372|gb|EFP12325.1| hypothetical protein CRE_29486 [Caenorhabditis remanei]
Length = 593
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 98/189 (51%), Gaps = 26/189 (13%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
R I A APTGSGKT AF +P+I + K+ +++ PTRELA QTY E V
Sbjct: 183 RNILASAPTGSGKTLAFALPVIEEILELKQRADYSKSSKLLTIVLEPTRELAAQTYTEFV 242
Query: 103 RLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVE 160
+ + A+ G+ Q D+L++TPN++V+ L ++D AL
Sbjct: 243 KYCAETSISVANFSGE---------ETDIQHADILVSTPNRIVFHLDKIDTSALR----- 288
Query: 161 WLIVDESDKLFE---AGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
WLIVDESD+LFE + FR+QL IY AC + FSAT + +V KWC+ +
Sbjct: 289 WLIVDESDRLFEVIEGQEKCFRNQLGAIYKACDAKCTRVAFFSATFSHEVEKWCKENIDN 348
Query: 218 RVQINVGLR 226
+ VG R
Sbjct: 349 IGMVCVGER 357
>gi|385305034|gb|EIF49032.1| atp-dependent rna helicase rok1 [Dekkera bruxellensis AWRI1499]
Length = 574
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 103/173 (59%), Gaps = 18/173 (10%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL------------RGPKNLGFRAVIVCPTRELAKQT 97
R I CAPTGSGKT AFLIP++ SL + K G ++V PT+ELA Q
Sbjct: 153 RDIIGCAPTGSGKTLAFLIPLVQSLLDFISPKNSVKGKSTKGSGIYGLVVSPTKELAYQI 212
Query: 98 YNETVRLSEGL-GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
++E ++ G+ G++ + K A + + KF++++TTP +L+ L++ D A++L
Sbjct: 213 FSELSKIVNGVPGIKVAYLNKSLAAKLRNKVIQSSKFNIIVTTPLRLISLVEDD--AIDL 270
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK 209
+++ +++DE+DK+FE+ F +Q I AC+ P+L+R +FSAT T V +
Sbjct: 271 SHIHHIVLDEADKMFES---NFVEQTDRILTACTNPHLRRSIFSATITSSVEE 320
>gi|323309141|gb|EGA62368.1| Rok1p [Saccharomyces cerevisiae FostersO]
Length = 496
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R + AC PTGSGKT AFLIP++ + K G + +I+ PT+ELA Q + E +LS
Sbjct: 159 NRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSHK 218
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 219 IFLEKKXPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKH 276
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
LI DE+DKLF+ + F +Q I +AC P+L++ MFSAT +V + + + V++
Sbjct: 277 LIFDEADKLFD---KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQSIMMDPVRV 333
Query: 222 NVG 224
+G
Sbjct: 334 IIG 336
>gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arabidopsis thaliana]
Length = 545
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 102/182 (56%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+ P RELA QT E +L
Sbjct: 178 GRECFACAPTGSGKTFAFICPMLIKLKVLNCRPSTDGIRAVILSPARELAAQTAREGKKL 237
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+G ++ K F S DVLI+TP +L ++ ++L+ VE+L++
Sbjct: 238 IKGSNFHIRLMTKPLVKTADF---SKLWCDVLISTPMRLKRAIKAK--KIDLSKVEYLVL 292
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DESDKLFE + Q+ + ACS P++ R +FSAT + V + R + V++ +G
Sbjct: 293 DESDKLFE---QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIG 349
Query: 225 LR 226
+
Sbjct: 350 RK 351
>gi|149239430|ref|XP_001525591.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060503|sp|A5E1N2.1|ROK1_LODEL RecName: Full=ATP-dependent RNA helicase ROK1
gi|146451084|gb|EDK45340.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 553
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 12/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP++ L KN G R +I+ PT ELA Q + + +S
Sbjct: 157 NRDLIACAPTGSGKTLAFLIPLLQQLVSQNVLKNHGIRGLIISPTNELAVQIFQQLEIIS 216
Query: 106 EGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+G GL ++ K Q A K A K+D+L++TP +L+ ++++ ++L+ V L+
Sbjct: 217 KGKGLNIAILSK--QLAGKISNDVVKASKYDILVSTPLRLIDVVKLG--KVDLSKVTQLV 272
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+DKLF+ GF +Q + + C+ +++ MFSAT V + +K +++ +
Sbjct: 273 IDEADKLFD---HGFAEQTDELLSHCTNVKIRKSMFSATIPSGVEEMAHSIMKDPIRVII 329
Query: 224 G 224
G
Sbjct: 330 G 330
>gi|363756464|ref|XP_003648448.1| hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891648|gb|AET41631.1| Hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
Length = 569
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 102/171 (59%), Gaps = 16/171 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I ACAPTGSGKT AFLIP+I + G + G + +I+ PT+ELA Q + E +LS
Sbjct: 154 RDIIACAPTGSGKTLAFLIPLIQQVISAGEVDSGVKGLIISPTKELASQIFTECSKLSHR 213
Query: 108 LGLRAH------VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ K K S +K+D++++TP +L+ L++ AL+L+ V+
Sbjct: 214 IFLEKRRPLNVALLSKSLSGKLKNKVVSDKKYDIIVSTPLRLIDLVK--ERALDLSCVKH 271
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
LI DE+DKLF+ + F +Q I ++CS L++ MFSAT H E++A+
Sbjct: 272 LIFDEADKLFD---KTFLEQTDDILSSCSNNKLQKSMFSATIPSHVEEIAQ 319
>gi|45187850|ref|NP_984073.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|74694371|sp|Q75AE1.1|ROK1_ASHGO RecName: Full=ATP-dependent RNA helicase ROK1
gi|44982634|gb|AAS51897.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|374107288|gb|AEY96196.1| FADL024Cp [Ashbya gossypii FDAG1]
Length = 569
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 113/188 (60%), Gaps = 13/188 (6%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETV 102
+S R I ACAPTGSGKT AFLIP++ + K + G + +I+ PT+ELA Q ++E
Sbjct: 156 ISLQNRDIVACAPTGSGKTLAFLIPLLQQVISDKAVGTGVKGLIISPTKELANQIFDECS 215
Query: 103 RLSEGLGLRAH------VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+L++ + L ++ K A K S +K+D++I+TP +L+ +++ + +L+L
Sbjct: 216 KLAQRIFLEKKRPLSVALLSKSLAAKLKNQIVSDKKYDIIISTPLRLIDIVKSE--SLDL 273
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+ V++LI DE+DKLF+ + F +Q I +ACS PN+ + +FSAT V + + +
Sbjct: 274 SAVKYLIFDEADKLFD---KTFVEQTDDILSACSHPNISKVLFSATLPSSVEELAQSIMT 330
Query: 217 RRVQINVG 224
V++ +G
Sbjct: 331 DPVRVIIG 338
>gi|349578061|dbj|GAA23227.1| K7_Rok1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 564
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 15/171 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R + AC PTGSGKT AFLIP++ + K G + +I+ PT+ELA Q + E +LS
Sbjct: 159 NRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSHK 218
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 219 IFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKH 276
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
LI DE+DKLF+ + F +Q I +AC P+L++ MFSAT + E++A+
Sbjct: 277 LIFDEADKLFD---KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQ 324
>gi|160358657|sp|A6ZU15.1|ROK1_YEAS7 RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|151943643|gb|EDN61953.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407114|gb|EDV10381.1| ATP-dependent RNA helicase ROK1 [Saccharomyces cerevisiae RM11-1a]
gi|256272243|gb|EEU07234.1| Rok1p [Saccharomyces cerevisiae JAY291]
gi|259146339|emb|CAY79596.1| Rok1p [Saccharomyces cerevisiae EC1118]
gi|323348686|gb|EGA82928.1| Rok1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765777|gb|EHN07283.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 564
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 15/171 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R + AC PTGSGKT AFLIP++ + K G + +I+ PT+ELA Q + E +LS
Sbjct: 159 NRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSHK 218
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 219 IFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKH 276
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
LI DE+DKLF+ + F +Q I +AC P+L++ MFSAT + E++A+
Sbjct: 277 LIFDEADKLFD---KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQ 324
>gi|403414605|emb|CCM01305.1| predicted protein [Fibroporia radiculosa]
Length = 874
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 107/185 (57%), Gaps = 15/185 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGP----KN---LGFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+PII SL P KN G RA+I+ PTRELA Q +NE +
Sbjct: 462 RDLAAISPTGTGKTLSYLLPIISSLGSPSAKLKNDCGPGVRALILAPTRELAHQIHNECL 521
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L++G R + K A +S Q K D++I+TP ++V LQ +L L NV
Sbjct: 522 KLAQGRKWRIVLFSKA--TASTLADKSVQDKVDIIISTPLRMVSALQAG--SLELRNVRH 577
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ +A F Q+ I ACS P +++ +FSAT K L+ ++I
Sbjct: 578 LVLDEADRMLDA---EFLTQVQEIITACSHPQVQKAVFSATLPAGAEKIAMDMLRDPIRI 634
Query: 222 NVGLR 226
VGL+
Sbjct: 635 VVGLK 639
>gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
gi|300162752|gb|EFJ29364.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
Length = 449
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 94/177 (53%), Gaps = 34/177 (19%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+ F CAPTGSGK+ AF++PI+ L+ G RAVI+CPTRELA Q E RL+ G
Sbjct: 113 RECFVCAPTGSGKSLAFILPILMKLKKSSPDGIRAVILCPTRELAAQLITECRRLANG-- 170
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
I+TP +L L++ + ++L VE+ I+DESDK
Sbjct: 171 ---------------------------ISTPLRLDKLVKSE--KIDLKRVEYFILDESDK 201
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G F Q+ I +AC+ N+ R +FSAT E V + R + ++I +G R
Sbjct: 202 LFELG---FMQQIDSIVSACTRTNIVRALFSATLPETVEELARTIMHDAIRIVIGER 255
>gi|365760811|gb|EHN02500.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 12/161 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R I AC PTGSGKT AFLIP++ + K+ G + +I+ PT+ELA Q + E +LS
Sbjct: 160 NRDILACGPTGSGKTLAFLIPLVQQIIDDKHTSGLKGLIISPTKELASQIFIECFKLSHK 219
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 220 IFLEKKRPLQVALLSKSLGAKLKNKVISDKKYDIIISTPLRLIDVVKKE--ALDLSRVKH 277
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
LI DE+DKLF+ + F +Q I +AC P L++ MFSAT
Sbjct: 278 LIFDEADKLFD---KTFVEQSDDILSACKEPALRKAMFSAT 315
>gi|401842122|gb|EJT44393.1| ROK1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 558
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 12/161 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R I AC PTGSGKT AFLIP++ + K+ G + +I+ PT+ELA Q + E +LS
Sbjct: 160 NRDILACGPTGSGKTLAFLIPLVQQIIDDKHTSGLKGLIISPTKELASQIFIECFKLSHK 219
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 220 IFLEKKRPLQVALLSKSLGAKLKNKVISDKKYDIIISTPLRLIDVVKKE--ALDLSRVKH 277
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
LI DE+DKLF+ + F +Q I +AC P L++ MFSAT
Sbjct: 278 LIFDEADKLFD---KTFVEQSDDILSACKEPALRKAMFSAT 315
>gi|6321267|ref|NP_011344.1| RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|1173121|sp|P45818.1|ROK1_YEAST RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|607182|emb|CAA84384.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
gi|971382|emb|CAA59758.1| putative ATP dependent RNA helicase [Saccharomyces cerevisiae]
gi|1322774|emb|CAA96883.1| ROK1 [Saccharomyces cerevisiae]
gi|285812042|tpg|DAA07942.1| TPA: RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|392299579|gb|EIW10673.1| Rok1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 564
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 104/171 (60%), Gaps = 15/171 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
R + AC PTGSGKT AFLIP++ + K G + +I+ PT+ELA Q + E +LS
Sbjct: 159 NRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSYK 218
Query: 108 LGLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+
Sbjct: 219 IFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKH 276
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
LI DE+DKLF+ + F +Q I +AC P+L++ MFSAT + E++A+
Sbjct: 277 LIFDEADKLFD---KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQ 324
>gi|302695853|ref|XP_003037605.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
gi|300111302|gb|EFJ02703.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
Length = 524
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 14/184 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL------GFRAVIVCPTRELAKQTYNETVR 103
R + A +PTG+GKT ++L+PII +L P G RAVIV PTRELA Q +NE ++
Sbjct: 156 RDLAAISPTGTGKTLSYLLPIIAALESPATSNESAGKGVRAVIVAPTRELAHQIHNECLK 215
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+EG R + K A ++ + K D++I+TP +LV LQ L L NV L
Sbjct: 216 LAEGRKWRIILFSKA--TASTLSDKAVRDKVDIIISTPLRLVASLQTG--DLELQNVRHL 271
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+D++ + F Q+ I A+C+ P++++ +FSAT K L+ ++I
Sbjct: 272 ILDEADRMLDP---EFLSQVEEIIASCTHPDVQKAVFSATLPAGAEKIAMDMLRNPIRIV 328
Query: 223 VGLR 226
VGL+
Sbjct: 329 VGLK 332
>gi|448087199|ref|XP_004196272.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359377694|emb|CCE86077.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R I ACAPTGSGKT AFL+P+I ++ N + +I+ T+ELA Q ++E L
Sbjct: 156 RDIIACAPTGSGKTLAFLVPLIQNIIVKRSENTNAAIKGLIIASTKELATQIHDELQALV 215
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+G L+ V+ K + +A K+D+LI+TP +L+ ++ + ++L+ VE LIVD
Sbjct: 216 KGKKLKVGVLSKSLASKINNKAVNASKYDILISTPLRLIECVKKE--TVDLSRVEELIVD 273
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D+LFE GF +Q I C+ P +++ +FSAT V + + ++ V++ VG
Sbjct: 274 EADRLFE---EGFVEQTDDILFQCTYPKIRKSIFSATIPSGVEEMAQSIMRDPVRVIVG 329
>gi|393247738|gb|EJD55245.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 565
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 15/186 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-------KNLGFRAVIVCPTRELAKQTYNET 101
GR + A +PTG+GKT A+ +P+ L+ P ++ G RAVI+ PTRELA Q YNE
Sbjct: 158 GRDLAAISPTGTGKTLAYTLPVFARLKSPSAKSQDIESKGVRAVILAPTRELAHQIYNEC 217
Query: 102 VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVE 160
++L++G R + K A ++ + K D++I+TP +LV L+ + L L NV
Sbjct: 218 LKLAQGRKWRIVLFSKA--TASTLADKNVRDKIDIVISTPLRLVACLKSE--TLELDNVR 273
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D+L + G Q+ IY+ACS L+ +FSAT V + + ++ ++
Sbjct: 274 HLILDEADRLLDTEFLG---QVQEIYSACSHKELQTAVFSATLPAAVEELSMQMMRNPIR 330
Query: 221 INVGLR 226
I VGL+
Sbjct: 331 IVVGLK 336
>gi|367000868|ref|XP_003685169.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
gi|357523467|emb|CCE62735.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
Length = 570
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 116/197 (58%), Gaps = 19/197 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPLG---RQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLG 81
++ N + HF EP + PL R + ACAPTGSGKT AFLIP++ + + +G
Sbjct: 135 LLRNLLENHFTEPTPVQSECIPLALHTRDMLACAPTGSGKTLAFLIPLLQQVIEQKEEIG 194
Query: 82 FRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPR------SAQKFDV 135
+ +I+ PT+ELA Q + E +L+ L L +I ++ + S +K+D+
Sbjct: 195 LKGLIISPTKELADQIFLECTKLANRLYLDKKRPLQIALLSKSLSSKLKNKVISDKKYDI 254
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
+I+TP +L+ +++ + AL+L+ V+ LI DE+DKLF+ + F +Q I +CS P+L+
Sbjct: 255 IISTPLRLIDVVKNE--ALDLSTVKHLIFDEADKLFD---KTFVEQTDDILNSCSDPSLR 309
Query: 196 RGMFSAT---HTEDVAK 209
+ MFSAT + E++A+
Sbjct: 310 KAMFSATIPSNVEEIAQ 326
>gi|448082648|ref|XP_004195179.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359376601|emb|CCE87183.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 555
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 106/179 (59%), Gaps = 9/179 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL--RGPKNL--GFRAVIVCPTRELAKQTYNETVRLS 105
R ACAPTGSGKT AFL+P+I ++ + +N + +I+ PT+ELA Q ++E L
Sbjct: 159 RDTIACAPTGSGKTLAFLVPLIQNIIVKRSENTSPAIKGLIIAPTKELATQIHDELQTLV 218
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+G L+ V+ K + +A K+D+LI+TP +L+ ++ + ++L+ VE LIVD
Sbjct: 219 KGKKLKVGVLSKSLASKINNKAVNASKYDILISTPLRLIECVKKE--TVDLSRVEELIVD 276
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D+LFE GF +Q I C+ P +++ +FSAT V + + ++ V++ VG
Sbjct: 277 EADRLFE---EGFVEQTDDILFQCTYPKIRKSIFSATIPSGVEEMAQSIMRDPVRVIVG 332
>gi|448525693|ref|XP_003869174.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis Co
90-125]
gi|380353527|emb|CCG23037.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis]
Length = 547
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 12/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP+I L + KN G R +I+ PT ELA Q + E L
Sbjct: 152 SRDLIACAPTGSGKTLAFLIPLIQQLLKKQVEKNYGVRGLIISPTNELAVQIFQELETLV 211
Query: 106 EGLGLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
G L ++ K Q A K A K+D++++TP +L+ +++ + ++L+ V+ L+
Sbjct: 212 RGKKLTIGILSK--QLASKLNNDIVKASKYDIIVSTPLRLIDIVKNE--KIDLSKVDQLV 267
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+DKLF+ GF +Q I + +++ MFSAT V + +K +++ +
Sbjct: 268 IDEADKLFD---HGFAEQTDEILNHLTNTKIRKSMFSATIPSGVEEMAHSIMKDPIRVII 324
Query: 224 G 224
G
Sbjct: 325 G 325
>gi|255719940|ref|XP_002556250.1| KLTH0H08646p [Lachancea thermotolerans]
gi|238942216|emb|CAR30388.1| KLTH0H08646p [Lachancea thermotolerans CBS 6340]
Length = 566
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 18/188 (9%)
Query: 27 VVSNSIFKHF-EPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNL 80
++SN I HF EP PL GR + ACAPTGSGKT AF++P++ + G K
Sbjct: 138 LLSNLIESHFTEPTPIQCEAIPLALEGRDVLACAPTGSGKTVAFILPLLQQIISLGDKE- 196
Query: 81 GFRAVIVCPTRELAKQTYNETVRLSEGL------GLRAHVIGKIQQAAEKFGPRSAQKFD 134
G + +I+ PT+ELA Q + E +LS + L ++ K A + S +K+D
Sbjct: 197 GLKGLIISPTKELANQIFVECSKLSHKIYLARKRPLNIALLSKSLSAKLRNKVISDKKYD 256
Query: 135 VLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
++I+TP +L+ +++ + AL+L++V+ LI DE+DKLF++ F +Q I A+C L
Sbjct: 257 LIISTPLRLIDVVKNE--ALDLSDVKHLIFDEADKLFDS---TFVEQADSILASCQDSQL 311
Query: 195 KRGMFSAT 202
++ MFSAT
Sbjct: 312 RKSMFSAT 319
>gi|401398472|ref|XP_003880323.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
gi|325114733|emb|CBZ50289.1| putative ATP-dependent RNA helicase [Neospora caninum Liverpool]
Length = 685
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 102/177 (57%), Gaps = 8/177 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A APTGSGKT AFL+P+I L+ P R ++VCP+RELAKQT E L+
Sbjct: 289 GQHLLATAPTGSGKTFAFLLPLITLLKRPGKEFARLLVVCPSRELAKQTQREFDSLAGAR 348
Query: 109 GLRAHVIGKIQQAAEKFGPRS-AQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G R ++ + +Q ++ P S A++ D + TTP +LV L+ ++LA L++DE+
Sbjct: 349 GFRCRLLDEQKQGTDQ--PLSQAKRVDAVATTPLRLVQFLRDG--RVSLAQCRHLVLDEA 404
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DKL + GF QL I A C+ P L+ +FSAT +V + L V I++G
Sbjct: 405 DKLLDL---GFAPQLDEILAGCTFPRLQVCLFSATLPPEVLRLADSLLHNPVHISIG 458
>gi|402594445|gb|EJW88371.1| hypothetical protein WUBG_00716 [Wuchereria bancrofti]
Length = 1245
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 94/177 (53%), Gaps = 20/177 (11%)
Query: 60 SGKTAAFLIPIIHSLRGPKNLG-------FRAVIVCPTRELAKQTYNETVRLSEGLGLRA 112
SGKT AF +PII + K+ AV++ PT ELAKQ Y + ++ S+ L +
Sbjct: 859 SGKTLAFALPIISDVVHRKSYAAEDQYRMLNAVVLEPTHELAKQIYVQFLKFSQNLSVSC 918
Query: 113 HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLF- 171
+ G + +++I+TPNKL+Y L+ + L+ + WL+VDESD+LF
Sbjct: 919 FFLQ---------GDEIPENANIVISTPNKLLYALKKNNKILS-NGLNWLVVDESDRLFD 968
Query: 172 --EAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
E R FR QLA IY CS ++R FSAT + +V WC+R L I +G R
Sbjct: 969 TTEGDDRCFRSQLAKIYQVCSESPVRRAFFSATFSYEVEDWCKRNLNDVAMICIGSR 1025
>gi|50306033|ref|XP_452978.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660546|sp|Q6CSW1.1|ROK1_KLULA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49642111|emb|CAH01829.1| KLLA0C17424p [Kluyveromyces lactis]
Length = 579
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 104/170 (61%), Gaps = 15/170 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFLIP++ + K +G + +I+ PT+ELA Q + E +L+ +
Sbjct: 171 RDMIACAPTGSGKTLAFLIPLLQQIINDKTTVGLKGLIISPTKELANQIFIECSKLANKI 230
Query: 109 GLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L ++ ++ + S K+D++I+TP +L+ ++Q + ALNL V+ L
Sbjct: 231 YLDKKRPLQVALLSKSLSSKLKNKVISEDKYDIIISTPLRLITVVQEE--ALNLGKVKHL 288
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAK 209
I DE+DKLF+ + F +Q I ++C+ P+L++ MFSAT + E++A+
Sbjct: 289 IFDEADKLFD---KTFVEQTDDILSSCTDPHLRKTMFSATIPSNVEEIAQ 335
>gi|167534955|ref|XP_001749152.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772305|gb|EDQ85958.1| predicted protein [Monosiga brevicollis MX1]
Length = 543
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + APTGSGKT AF +P++ L+ PK GFR I+ PTRELA Q E L+ L
Sbjct: 117 RDVVGVAPTGSGKTLAFAVPMMQLLQAPKEEGFRCCILAPTRELAAQIKRELDLLNTHLH 176
Query: 110 LRAHVIGKIQQA------AEKFG------------PRSAQKF--------DVLITTPNKL 143
L+ ++ K + A ++K G P+ K D+L+ TP +L
Sbjct: 177 LKISLLTKARAASGSLTSSKKHGWWPGCPKMIPVCPKVLLKLTWCMRARPDILVATPMRL 236
Query: 144 VYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATH 203
V+ LQ ++L+ V WL+VDE+D+LFE GF Q+ + AACS + +FSAT
Sbjct: 237 VHALQHK--LVDLSAVRWLVVDEADRLFE---NGFEQQIDEVIAACSHKKRRIALFSATM 291
Query: 204 TEDVAKWCRRKLKRRVQINVG 224
E V + L V+I VG
Sbjct: 292 PERVETLAQTVLHDYVRIVVG 312
>gi|170593001|ref|XP_001901253.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
gi|158591320|gb|EDP29933.1| Helicase conserved C-terminal domain containing protein [Brugia
malayi]
Length = 1209
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 94/178 (52%), Gaps = 35/178 (19%)
Query: 60 SGKTAAFLIPII--------HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR 111
SGKT AF +PII H+ G ++ AV++ PT ELAKQTY + ++ S+ L +
Sbjct: 848 SGKTLAFALPIISNVVHRKHHAAEGQYHM-LNAVVLEPTHELAKQTYVQFLKFSQNLSVS 906
Query: 112 AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLF 171
++++ I+TPNKLVY L+ + N N WL+VDESD+LF
Sbjct: 907 SNIV---------------------ISTPNKLVYALKKNKILSNGLN--WLVVDESDRLF 943
Query: 172 ---EAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
E R FR QLA IY CS ++R FSAT + +V WC++ L I +G R
Sbjct: 944 DTTEGDDRCFRSQLAKIYQICSESPVRRAFFSATFSYEVEDWCKKNLNDVAMICIGSR 1001
>gi|68490782|ref|XP_710786.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|68490809|ref|XP_710773.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432016|gb|EAK91525.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432030|gb|EAK91538.1| potential DEAD box RNA helicase [Candida albicans SC5314]
Length = 496
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG---PKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP++ + KN G R +I+ PT ELA Q + E ++
Sbjct: 86 NRDLIACAPTGSGKTLAFLIPLVQQILSKNVSKNHGIRGLIISPTNELAVQIFQELEIIT 145
Query: 106 EGLG-LRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
G + ++ K Q A K + K+D++++TP +L+ +++ ++L+ +E L
Sbjct: 146 RGCKQINVAILSK--QLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQG--NMDLSKIEQL 201
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+DKLF+ GF +Q I C+ P +++ +FSAT V + +K ++I
Sbjct: 202 IIDEADKLFD---HGFAEQTDEILTHCTNPKIRKSIFSATIPSSVEEMAHSIMKDPLRII 258
Query: 223 VG 224
+G
Sbjct: 259 IG 260
>gi|255075181|ref|XP_002501265.1| predicted protein [Micromonas sp. RCC299]
gi|226516529|gb|ACO62523.1| predicted protein [Micromonas sp. RCC299]
Length = 432
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
G ++ A APTGSGKT AFL+P++ L + G RA+++ PT+ELA+Q++ L
Sbjct: 69 GSELLAVAPTGSGKTLAFLLPMVTKLAAKDDEAGGPRALLLSPTKELAQQSFRILKLLCR 128
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G V Q E K D+L+ TP +L L++ + ++L V +L++DE
Sbjct: 129 GTNTLRCVWSSATQNNE------FAKVDILVATPLRLKSLIEKN--KVSLGAVRYLVLDE 180
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+DKLFE G F +Q+ AAC GPN+ R +FSAT E V R + + +++ VG R
Sbjct: 181 ADKLFEMG---FVEQVDAAVAACDGPNITRALFSATLPETVENLARSVMTQPIRLTVGER 237
>gi|238878350|gb|EEQ41988.1| ATP-dependent RNA helicase ROK1 [Candida albicans WO-1]
Length = 640
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG---PKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP++ + KN G R +I+ PT ELA Q + E ++
Sbjct: 230 NRDLIACAPTGSGKTLAFLIPLVQQILSKNVSKNHGIRGLIISPTNELAVQIFQELEIIT 289
Query: 106 EGLG-LRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
G + ++ K Q A K + K+D++++TP +L+ +++ ++L+ +E L
Sbjct: 290 RGCKQINVAILSK--QLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQG--NMDLSKIEQL 345
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+DKLF+ GF +Q I C+ P +++ +FSAT V + +K ++I
Sbjct: 346 IIDEADKLFD---HGFAEQTDEILTHCTNPKIRKSIFSATIPSSVEEMAHSIMKDPLRII 402
Query: 223 VG 224
+G
Sbjct: 403 IG 404
>gi|241950191|ref|XP_002417818.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223641156|emb|CAX45533.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 563
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 17/208 (8%)
Query: 27 VVSNSIFKHFEPHFTITYLS-PL---GRQIFACAPTGSGKTAAFLIPIIHSLRG---PKN 79
V+SN I F TI S P+ R + ACAPTGSGKT AFLIP++ + KN
Sbjct: 136 VLSNLIENEFIEPTTIQCESIPITLNNRDLIACAPTGSGKTLAFLIPLVQQILSKTVSKN 195
Query: 80 LGFRAVIVCPTRELAKQTYNETVRLSEGLG-LRAHVIGKIQQAAEKFGPR--SAQKFDVL 136
G R +I+ PT ELA Q + E ++ G + ++ K Q A K + K+D++
Sbjct: 196 YGIRGLIISPTNELAVQIFQELEIITRGCKQINVAILSK--QLASKLNNNIIKSSKYDII 253
Query: 137 ITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR 196
++TP +L+ +++ ++L+ +E LI+DE+DKLF+ GF +Q I C P +++
Sbjct: 254 VSTPLRLIDVVKQG--NMDLSKIEQLIIDEADKLFD---HGFAEQTDEILTHCINPKIRK 308
Query: 197 GMFSATHTEDVAKWCRRKLKRRVQINVG 224
+FSAT V + +K ++I +G
Sbjct: 309 SIFSATIPSSVEEMAHSIMKDPLRIIIG 336
>gi|300120302|emb|CBK19856.2| unnamed protein product [Blastocystis hominis]
Length = 563
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 8/175 (4%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+ PTGS KTAA+L+PI+ RAVI+ PT ELA Q + +RL E G
Sbjct: 167 REFLGIVPTGSVKTAAYLLPILQRRNAHGTEHIRAVILTPTLELAAQVHRHLLRLGERSG 226
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
+++ V+ K + G Q D LI+TP +L+ + ++L+ E L++DE DK
Sbjct: 227 IKSKVLSKSTWPIFQEG---KQSIDCLISTPLRLISAISAS--IIDLSQAEILVLDEGDK 281
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
LFE GF +Q+ I AACS P L+R +FSAT + V R L+ +++ VG
Sbjct: 282 LFED---GFIEQIDEIMAACSNPRLQRLLFSATLPQGVEAIARTVLRDPIRVIVG 333
>gi|356572415|ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 536
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 13/178 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGS + P++ L+ P+ G RAVI+C TREL+ QTY E +L++
Sbjct: 181 GRECFACAPTGSAPCRC-VCPMLMKLKDPEKGGIRAVILCHTRELSVQTYRECKKLAKRK 239
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKF--DVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
R ++ K F KF DVLI+TP +L L + ++L+ VE+L++DE
Sbjct: 240 KFRIKLMTKNLLRNADFS-----KFPCDVLISTPLRL--RLAIKRKKIDLSRVEYLVLDE 292
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
SDKLFE + F+ Q+ + ACS P++ R +FSAT + V R + V++ VG
Sbjct: 293 SDKLFEPEL--FK-QIDSVIKACSNPSIIRSLFSATLPDFVEDQARELMHDAVRVIVG 347
>gi|426201672|gb|EKV51595.1| hypothetical protein AGABI2DRAFT_189828 [Agaricus bisporus var.
bisporus H97]
Length = 566
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 24/216 (11%)
Query: 28 VSNSIFKHF------EPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGP- 77
+SN +F++ P ++ P+ R + A +PTG+GKT ++L+PI+ L+ P
Sbjct: 121 ISNQLFQNLSKSGYRHPTSIQSHAVPIMMNSRDLAAISPTGTGKTLSYLLPILARLQAPI 180
Query: 78 ---KN---LGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ 131
KN LG RA++V PTRELA Q YNE+++L++G R + K A + +
Sbjct: 181 SSMKNEAYLGVRALVVVPTRELAYQIYNESLKLTQGRNWRTIMFTKA--TANTLAVKEVR 238
Query: 132 -KFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACS 190
K DV+I+TP +LV L+ ++L N+ L++DE+D+LF+ + F Q I C+
Sbjct: 239 DKVDVIISTPLRLVASLRAG--IIDLQNIRHLVLDEADRLFD---KEFFSQTQEIITYCN 293
Query: 191 GPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
P +++ +FSAT K L+ ++I VGL+
Sbjct: 294 HPGVQKAVFSATLPAGAEKIAMEMLQDPIRIVVGLK 329
>gi|409083276|gb|EKM83633.1| hypothetical protein AGABI1DRAFT_110276 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 566
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 119/216 (55%), Gaps = 24/216 (11%)
Query: 28 VSNSIFKHF------EPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGP- 77
+SN +F++ P ++ P+ R + A +PTG+GKT ++L+PI+ L+ P
Sbjct: 121 ISNQLFQNLSKSGYRHPTSIQSHAVPIMMNSRDLAAISPTGTGKTLSYLLPILARLQAPI 180
Query: 78 ---KN---LGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ 131
KN LG RA++V PTRELA Q YNE+++L++G R + K A + +
Sbjct: 181 SSMKNEAYLGVRALVVVPTRELAYQIYNESLKLTQGRNWRTIMFTKA--TANTLAVKEVR 238
Query: 132 -KFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACS 190
K DV+I+TP +LV L+ ++L N+ L++DE+D+LF+ + F Q I C+
Sbjct: 239 DKVDVIISTPLRLVASLRAG--IIDLQNIRHLVLDEADRLFD---KEFFSQTQEIITYCN 293
Query: 191 GPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
P +++ +FSAT K L+ ++I VGL+
Sbjct: 294 HPGVQKAVFSATLPAGAEKIAMEMLQDPIRIVVGLK 329
>gi|356505198|ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 537
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 102/178 (57%), Gaps = 12/178 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTG + F+ P++ L+ P+ RAVI+C TREL+ QTY E +L++
Sbjct: 181 GRECFACAPTGCVVGSYFVWPMLMKLKDPEKGSIRAVILCHTRELSVQTYRECKKLAKRK 240
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKF--DVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
R ++ K F KF DVLI+TP +L L + ++L+ VE+L++DE
Sbjct: 241 KFRIKLMTKNLLRNADFS-----KFPCDVLISTPLRL--RLAIKRKKIDLSRVEYLVLDE 293
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
SDKLFE + F+ Q+ + ACS P++ R +FSAT + V R + V++ VG
Sbjct: 294 SDKLFEPEL--FK-QIDSVIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIVG 348
>gi|353237317|emb|CCA69293.1| probable ROK1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 561
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 11/183 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-----KNLGFRAVIVCPTRELAKQTYNETVR 103
GR + A +PTG+GKT A+L+PI L+ P G RAVIV PT+ELA Q YNE +
Sbjct: 157 GRDLAAVSPTGTGKTLAYLLPIFARLKTPVSSQEDRPGVRAVIVAPTKELAGQIYNEAQK 216
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L++G R + K A K P K D++I+TP +LV +Q + L V+ LI
Sbjct: 217 LAQGRKWRIVLFSKATAATLK-DPSVRGKVDIIISTPMRLVASIQAG--DIQLDRVQVLI 273
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D+L + F Q+ I CS P ++ +FSAT K + +++ V
Sbjct: 274 LDEADRLLDP---EFASQVEEIVGCCSNPACQKAVFSATLPAKAEKTVLNMMNDPIRVVV 330
Query: 224 GLR 226
GL+
Sbjct: 331 GLK 333
>gi|395326045|gb|EJF58459.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 579
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 105/184 (57%), Gaps = 13/184 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-------NLGFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+P++ +L P G RAVI+ PTRELA Q +NE +
Sbjct: 166 RDLAAISPTGTGKTLSYLLPVMAALGAPAASSKSDAGSGVRAVILAPTRELAHQIHNECL 225
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+L++G R + K AA + +K D++I+TP +LV LQ L L NV L
Sbjct: 226 KLAQGRKWRIVLFSKA-TAATLADKKVREKIDIIISTPLRLVASLQAG--NLELDNVRHL 282
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + F +Q+ + AAC+ P +++ +FSAT + K L+ +++
Sbjct: 283 FLDEADRMLDT---EFLEQVQEVIAACTHPEIQKAVFSATLPANAEKIAMSMLRDPIRVV 339
Query: 223 VGLR 226
VGL+
Sbjct: 340 VGLK 343
>gi|312087983|ref|XP_003145684.1| hypothetical protein LOAG_10109 [Loa loa]
Length = 537
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 21/177 (11%)
Query: 60 SGKTAAFLIPIIHSLRGPKNLG-------FRAVIVCPTRELAKQTYNETVRLSEGLGLRA 112
SGKT AF +PII + K+ AV++ PT ELAKQTY + ++ S+ L +
Sbjct: 158 SGKTLAFALPIIFDVVRCKSHTAEDQYPMLNAVVLEPTYELAKQTYIQFLKFSQNLPVSC 217
Query: 113 HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLF- 171
+ G + +++I+TPNKLV+ L+ + N WLI+DESD+LF
Sbjct: 218 CFLE---------GDEIPENANIVISTPNKLVHALKKNNKISTGLN--WLIIDESDRLFD 266
Query: 172 --EAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
E R FR+Q A IY AC+G ++ R FSAT + +V WC+R L I +G R
Sbjct: 267 TTEGNDRCFRNQFATIYQACNGNSVCRAFFSATFSYEVEDWCKRNLCDMAMICIGSR 323
>gi|409051237|gb|EKM60713.1| hypothetical protein PHACADRAFT_110354 [Phanerochaete carnosa
HHB-10118-sp]
Length = 576
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 15/185 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-------LGFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+P+ SL P + G RA+++ PTRELA Q +NE +
Sbjct: 163 RDLAAISPTGTGKTLSYLLPVFASLGAPSSSSDSEHGQGVRALVLAPTRELAHQIHNECL 222
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L++G R + K A ++AQ K D++I+TP ++V LQ L L+NV
Sbjct: 223 KLAQGRKWRIVLFSKATAAT--LADKNAQDKVDIVISTPLRMVAALQSG--NLKLSNVRH 278
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ + F +Q+ I AACS P +++ +FSAT + + + +++
Sbjct: 279 LVLDEADRMLDP---EFLEQIREIIAACSYPRVQKAVFSATLPANAERIAMDMMTNPIRV 335
Query: 222 NVGLR 226
VGL+
Sbjct: 336 VVGLK 340
>gi|392597064|gb|EIW86386.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 542
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 13/185 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-------GFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++++P+ L+ P + G RAVI+ PTRELA Q +NE +
Sbjct: 161 RDLAAISPTGTGKTLSYILPVFSLLKLPSSTSKHDAGSGVRAVILAPTRELAHQIHNECL 220
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGP-RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L+EG + + K A K R D++I+TP +LV +Q + L NV
Sbjct: 221 KLAEGRKWKIVLFNKTTANALKDQQTRDKVVQDIIISTPLRLVAAIQEG--NVTLKNVRH 278
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ +A F Q+ I AAC+ PNL++ +FSAT K L+ ++I
Sbjct: 279 LVLDEADRMLDA---EFLSQVQEIIAACTHPNLQKAVFSATLPAGAEKLAMAMLRNPIRI 335
Query: 222 NVGLR 226
VGL+
Sbjct: 336 VVGLK 340
>gi|391340178|ref|XP_003744422.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Metaseiulus occidentalis]
Length = 721
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 30/181 (16%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR I+ACA TG+GKTAAF++P++ L R + R ++V PTREL+ Q Y +++L++
Sbjct: 181 GRDIYACAATGTGKTAAFMLPVLERLLYRSRGEIVTRVIVVVPTRELSVQVYQVSIQLAQ 240
Query: 107 -----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
GL L K+Q++ + P D++I TP +L+ LQ + P N
Sbjct: 241 FTSINVALATGGLDL------KVQESHLRQNP------DIIIATPGRLIDHLQ-NTPTFN 287
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
L N+E +I+DE+DKL E F +QL I C+ P + +FSAT ++ V + L
Sbjct: 288 LHNIEVMILDEADKLLED---QFAEQLKEIIKQCA-PTRQTMLFSATMSDRVQDLAKLSL 343
Query: 216 K 216
K
Sbjct: 344 K 344
>gi|427792819|gb|JAA61861.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 696
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LGR I+ACA TG+GKTAAF++P++ L R +++ R +++ PTRELA Q Y +++L+
Sbjct: 161 LGRDIYACAATGTGKTAAFMLPVLERLLFRPKQDVVTRVLVIVPTRELAVQVYQVSLQLA 220
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL L+A Q+AA + P D++I TP +L+ L+ + P
Sbjct: 221 QFTNIMITLSAGGLDLKA------QEAALRKLP------DIIIATPGRLIDHLE-NTPGF 267
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L N+E LI+DE+DK+ + F Q+ I C+ P + +FSAT TE+V
Sbjct: 268 DLRNIEVLILDEADKMLD---ETFASQMKEIIRQCA-PTRQTMLFSATMTEEVKDLAAVS 323
Query: 215 LKRRVQI 221
L++ V++
Sbjct: 324 LQKPVKL 330
>gi|393218769|gb|EJD04257.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 573
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 113/205 (55%), Gaps = 18/205 (8%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-------LGF 82
+ + P +Y +P+ GR + A +PTG+GKT ++L+PI L+ P + G
Sbjct: 137 YGYSSPTDIQSYATPIMLQGRDLAAISPTGTGKTLSYLVPIFSLLKAPNSSSKVTVGSGV 196
Query: 83 RAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPN 141
RAVI+ PTRELA Q +NE +++++G + ++ K A ++ + K D++++TP
Sbjct: 197 RAVILAPTRELAHQIHNECMKIAQGRKWKMVLLSKA--TASTLADKAVRVKVDIIVSTPL 254
Query: 142 KLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSA 201
+LV +Q L L NV+ L++DE+D+L ++ F Q + AC N+++ +FSA
Sbjct: 255 RLVDSMQR--CNLELDNVQHLVLDEADRLLDS---EFLSQTQEVMNACMRENVQKAVFSA 309
Query: 202 THTEDVAKWCRRKLKRRVQINVGLR 226
T K L+ V+I VGL+
Sbjct: 310 TLPAGAEKIAMGALRNPVRIIVGLK 334
>gi|448522708|ref|XP_003868758.1| Dbp10 protein [Candida orthopsilosis Co 90-125]
gi|380353098|emb|CCG25854.1| Dbp10 protein [Candida orthopsilosis]
Length = 912
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 13/156 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A TGSGKTAAF++P+I L+ + G RAVI+ P+RELA QTY + S G
Sbjct: 132 RDVVGMARTGSGKTAAFVLPLIEKLKSRRPTGVRAVILSPSRELALQTYKQVKEFSRGTD 191
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIVDE 166
L++ V+ E FG + K DV++ TP + ++L +Q D L+ V++++ DE
Sbjct: 192 LQSIVLIGGDSLEEDFG-KMVSKPDVIVCTPGRFLHLKVEMQYD-----LSTVQYIVFDE 245
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL + A PN + +FSAT
Sbjct: 246 ADRLFEM---GFAEQLNELLLALP-PNRQSLLFSAT 277
>gi|74654532|sp|Q9Y7C4.1|ROK1_CANAL RecName: Full=ATP-dependent RNA helicase CHR1
gi|4589366|gb|AAD26468.1| DEAD box RNA helicase [Candida albicans]
Length = 578
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG---PKNLGFRAVIVCPTRELAKQTYNETVRLS 105
R + ACAPTGSGKT AFLIP++ + KN G R +I+ PT ELA Q + E ++
Sbjct: 168 NRDLIACAPTGSGKTLAFLIPLVQQILSKNVSKNHGIRGLIISPTNELAVQIFQELEIIT 227
Query: 106 EGLG-LRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
G + ++ K Q A K + K+D++++TP +L+ +++ ++L+ +E L
Sbjct: 228 RGCKQINVAILSK--QLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQG--NMDLSKIEQL 283
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I+DE+DKLF+ GF +Q I C+ +++ +FSAT V + +K ++I
Sbjct: 284 IIDEADKLFD---HGFAEQTDEILTHCTNLKIRKSIFSATIPSSVEEMAHSIMKDPLRII 340
Query: 223 VG 224
+G
Sbjct: 341 IG 342
>gi|50547433|ref|XP_501186.1| YALI0B21538p [Yarrowia lipolytica]
gi|74660084|sp|Q6CDS6.1|ROK1_YARLI RecName: Full=ATP-dependent RNA helicase ROK1
gi|49647052|emb|CAG83439.1| YALI0B21538p [Yarrowia lipolytica CLIB122]
Length = 547
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 96/164 (58%), Gaps = 16/164 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
GR + ACAPTGSGKT A+ IP++ L G +A++V PT+ELA Q +N
Sbjct: 148 GRDLIACAPTGSGKTMAYSIPMVEMLGKKKGSKDAKKGIKALVVAPTKELASQIFNAVFS 207
Query: 104 LSEGLG-----LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L G+G L+ ++ K + G S+QK+D+ ITTP +LV L + +L+L +
Sbjct: 208 LCVGVGKKKDELKPCLLDKSTADKLRNGKVSSQKYDICITTPLRLVSAL--NDGSLDLGS 265
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
++ +I DE+DKLFE +GF Q+ I AAC +++ +FSAT
Sbjct: 266 LDLVIFDEADKLFE---KGFATQVDDILAACPS-GIQKTLFSAT 305
>gi|422293301|gb|EKU20601.1| putative dead box rna helicase [Nannochloropsis gaditana CCMP526]
Length = 300
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 103/197 (52%), Gaps = 21/197 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVR 103
+GR + A APTGSGKTAAF++P + L + G RA+++ PTRELA Q E R
Sbjct: 1 MGRDLLATAPTGSGKTAAFVLPTLLRLEKAEARLLRNGPRALLLAPTRELASQICGEVQR 60
Query: 104 LSEGLGLRAHVIGKIQQAA-EKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ G + V+ K A ++ G +D+L+ TP +L+ L+ ++L V +
Sbjct: 61 LAAGRAFKVAVVSKALAATKDEAGQGVFSGYDLLVATPMRLLQALREG--RVDLRRVRAV 118
Query: 163 IVDESDKLFEAGVRG--------------FRDQLAVIYAACSGPNLKRGMFSATHTEDVA 208
++DE+DKLFE G G F Q+ I AAC+ P ++R +FSAT +
Sbjct: 119 VLDEADKLFELGREGKKNAAGESLEPDKSFLGQVDEILAACTYPEVQRALFSATLPPLIQ 178
Query: 209 KWCRRKLKRRVQINVGL 225
L+ V ++VGL
Sbjct: 179 DLAGSVLRDPVSVSVGL 195
>gi|449550561|gb|EMD41525.1| hypothetical protein CERSUDRAFT_146544 [Ceriporiopsis subvermispora
B]
Length = 575
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 107/185 (57%), Gaps = 15/185 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+P++ SL +G G RA+I+ PTRELA Q +NE +
Sbjct: 163 RDLAAISPTGTGKTLSYLLPVMASLGAPAASSKGDAGTGVRALILAPTRELAHQIHNECL 222
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L++G R + K A ++ + K D++I+TP +LV LQ + L NV
Sbjct: 223 KLAQGRKWRIVLFSKA--TASTLADKNVRDKVDLVISTPLRLVAALQAG--HIELDNVRH 278
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
+++DE+D++ ++ F Q+ + AAC+ PN+++ +FSAT K L+ +++
Sbjct: 279 IVLDEADRMLDS---EFLSQVQEVVAACTYPNVQKAVFSATLPAGAEKIAMSMLQDPIRV 335
Query: 222 NVGLR 226
VGL+
Sbjct: 336 VVGLK 340
>gi|390604084|gb|EIN13475.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 592
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 112/212 (52%), Gaps = 29/212 (13%)
Query: 38 PHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-------------- 80
P Y +P+ R + A +PTG+GKT ++L+P+ +LR P +
Sbjct: 144 PTSIQAYGAPILLSARDLAAISPTGTGKTLSYLLPVFAALRSPSHSKSKNDSDPPTSGGA 203
Query: 81 ------GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFD 134
G RA+I+ PTRELA Q +NE ++L++G R + K AA D
Sbjct: 204 ERAVGEGVRALIIAPTRELAHQIHNECLKLAQGRKWRIILFSKA-TAATLVDKNVRDNVD 262
Query: 135 VLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
++I+TP +LV L + +++L+NV L++DE+D+L +A F QL I AAC+ P+
Sbjct: 263 IIISTPLRLVSALGSN--SISLSNVRHLVLDEADRLLDA---EFLPQLQDIIAACTHPSC 317
Query: 195 KRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
++ +FSAT V K +K V++ VGL+
Sbjct: 318 QKAVFSATLPAGVEKIAMGMMKDPVRVVVGLK 349
>gi|303286117|ref|XP_003062348.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455865|gb|EEH53167.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 458
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 107/194 (55%), Gaps = 26/194 (13%)
Query: 48 LGR-QIFACAPTGSGK------------TAAFLIPIIHSLRGPKNLGF-RAVIVCPTREL 93
LGR ++ A APTGSGK T AF +PI+ +L+ N+G RA+++ PT+EL
Sbjct: 26 LGRHELLAVAPTGSGKARSIRHWSPYDRTLAFSLPILVALKTRANVGGPRALLLSPTKEL 85
Query: 94 AKQTYNETVRLSEGL-GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP 152
A+Q++ L G LR ++ K Q E K DVL+ TP +L L++
Sbjct: 86 AQQSHRILTLLCRGTNSLRTCLLTKATQNNE------MDKVDVLVATPLRLKSLIEKR-- 137
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
NL+ VE+L++DE+DKLFE G F +Q+ AAC GP + R +FSAT E V + R
Sbjct: 138 KCNLSFVEFLVLDEADKLFEMG---FVEQVDAAVAACDGPRVTRALFSATLPETVEQLAR 194
Query: 213 RKLKRRVQINVGLR 226
+ +++ VG R
Sbjct: 195 SVMTSPMRLTVGER 208
>gi|260946563|ref|XP_002617579.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
gi|238849433|gb|EEQ38897.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
Length = 561
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 106/181 (58%), Gaps = 13/181 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
R + ACAPTGSGKT AFL+P++ L KN G R +++ PT ELA Q + + +L+
Sbjct: 168 RDLIACAPTGSGKTVAFLLPMVQLLVEANLSKNPGVRGLVLAPTNELASQIHVQLQQLTR 227
Query: 107 GL-GLRAHVIGKIQQAAEKFGPR--SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
G + + ++ + Q A + + S +K+ V+++TP +L+ ++Q L+L+ VE L+
Sbjct: 228 GFKSVTSALLSR--QLATRLSDKIVSGEKYSVIVSTPLRLLDMVQ--GGHLDLSTVEQLV 283
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ RGF +Q + AA S L+ +FSAT V + ++ V++ V
Sbjct: 284 IDEADRMFD---RGFVEQTDALLAALSNAKLRTSIFSATIPAKVEELANSIMRDPVRVIV 340
Query: 224 G 224
G
Sbjct: 341 G 341
>gi|170084181|ref|XP_001873314.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650866|gb|EDR15106.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 450
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 104/186 (55%), Gaps = 15/186 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
R + A +PTG+GKT ++L P++ L + P G RA+I+ PTRELA Q +NE
Sbjct: 59 SRDLAAISPTGTGKTLSYLFPVLSKLACPLSASQDPTKKGARALILAPTRELAHQIHNEC 118
Query: 102 VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANVE 160
+RL++G R + K A ++ + K D++I+TP +L+ Q L L +V+
Sbjct: 119 LRLTQGRKWRIVLFSKA--TANSLANKAVRDKVDIIISTPLRLISSYQDG--KLELNSVQ 174
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
L++DE+D+L + R F Q+ I ACS +++ +FSAT ++ K L+ ++
Sbjct: 175 HLVLDEADRLLD---REFLPQVQEIVGACSFSGIQKAVFSATLPAEIEKLALEMLRNPIR 231
Query: 221 INVGLR 226
+ VGL+
Sbjct: 232 VVVGLK 237
>gi|392884823|ref|NP_490891.2| Protein Y71G12B.8 [Caenorhabditis elegans]
gi|373219451|emb|CCD67990.1| Protein Y71G12B.8 [Caenorhabditis elegans]
Length = 739
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 104/180 (57%), Gaps = 18/180 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG-FRAVIVCPTRELAKQTYNETVRLSE 106
G+ I ACA TG+GKTAAF++PI+ + PK R +++ PTRELA Q + +LS
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 244
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L + K Q+AA + GP DV++ TP +L+ L + P+ NL+N+E
Sbjct: 245 FIQLEVCLCAGGLDLKAQEAALRSGP------DVVVATPGRLIDHLH-NSPSFNLSNIEV 297
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ E FRDQ+ + C+ N + +FSAT TE++ + L++ V+I
Sbjct: 298 LVLDEADRMLE---EAFRDQMNELIRLCA-QNRQTLLFSATMTEEIDELASMSLQKPVKI 353
>gi|294884893|gb|ADF47451.1| vasa PlVAS1-like protein, partial [Dugesia japonica]
Length = 802
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 66/188 (35%), Positives = 110/188 (58%), Gaps = 17/188 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLR-----GPKN-LGF-RAVIVCPTRELAKQTYNETV 102
R + ACA TGSGKTAAFLIPII SL P + + F +A+I+ PTREL +Q +
Sbjct: 400 RDLMACAQTGSGKTAAFLIPIIKSLHENIVDAPASAVAFPKALIMAPTRELCRQIFTAAR 459
Query: 103 RLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L G ++ A++ G I+ + +S+ D+L+ TP +L++ L++ ++L +++
Sbjct: 460 QLCRGSNVKCAYIYGGIEMNKSRRNIQSS-GCDILVATPGRLIHFLEL--VWISLRYLKF 516
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIY--AACSGPN--LKRGMFSATHTEDVAKWCRRKLKR 217
I+DE+D++ E+ GF + + IY A CSG + ++ MFSAT ++ R LK
Sbjct: 517 FILDEADRMLES--EGFYESVNKIYVDANCSGDDRTIQISMFSATFPNEIQSLARNLLKN 574
Query: 218 RVQINVGL 225
+ + VG+
Sbjct: 575 YLFLAVGV 582
>gi|325180097|emb|CCA14499.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 836
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 7/165 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGK+AAFLIP+I L+ +G R +++ PTRELA QT T L++
Sbjct: 63 GKDVVGMARTGSGKSAAFLIPLIEKLKEHSTRVGLRGLVLAPTRELALQTLQFTKGLAKY 122
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR +I + ++F ++ D+L+ TP +L++ LQ + P NL +VE+++ DE+
Sbjct: 123 TSLRVSLIVGGEGMEQQFSALASNP-DILVATPGRLMHHLQ-EIPDFNLKSVEYVVFDEA 180
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
D+LFE GF DQL I + PN + +FSAT +A++ R
Sbjct: 181 DRLFEM---GFADQLHEILSQMP-PNRQTLLFSATLPSVLAQFAR 221
>gi|169844518|ref|XP_001828980.1| ROK1 [Coprinopsis cinerea okayama7#130]
gi|116510092|gb|EAU92987.1| ROK1 [Coprinopsis cinerea okayama7#130]
Length = 574
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 16/187 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP--------KNLGFRAVIVCPTRELAKQTYNE 100
R + A +PTG+GKT A+L+P+ L P G RAV+V PTRELA Q YNE
Sbjct: 171 SRDLAAISPTGTGKTLAYLLPLFARLGAPLHQTHDQSAGKGVRAVVVAPTRELAHQIYNE 230
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQ-KFDVLITTPNKLVYLLQMDPPALNLANV 159
++L++G R + K A + + K D++++TP +LV +Q L NV
Sbjct: 231 CLKLAQGRKWRITLFSKA--TASTLATKEVRDKTDIIVSTPLRLVAAVQEG--KFELENV 286
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D+L + F +Q + A+C+ L++ +FSAT V K L+ +
Sbjct: 287 RYLVLDEADRLLDT---EFLEQTEELVASCTHSRLQKAIFSATLPAGVEKIAMDMLQDPI 343
Query: 220 QINVGLR 226
++ VGL+
Sbjct: 344 RLVVGLK 350
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 104/182 (57%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L RG K R +I+ PTRELA Q Y +
Sbjct: 219 LGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLILAPTRELAVQCYEVGSK 278
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ +R A V+G + A++ R+ + DV+I TP +L+ L+ + P L ++ L
Sbjct: 279 LAAHTDIRFALVVGGLSVKAQETNLRT--RPDVVIATPGRLIDHLR-NSPTFTLDALDIL 335
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ E GF D+L I +C P ++ M FSAT T+ V + R L + V++
Sbjct: 336 VLDEADRMLE---DGFSDELTEIITSC--PTSRQTMLFSATMTDSVDELVRMSLNKPVRL 390
Query: 222 NV 223
V
Sbjct: 391 FV 392
>gi|358253999|dbj|GAA54032.1| probable ATP-dependent RNA helicase DDX52 [Clonorchis sinensis]
Length = 719
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 104/233 (44%), Gaps = 72/233 (30%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSL----------------------RGPKNLGFRAVIVCP 89
+ ACAPTGSGKTAA+LIP++ P + ++I+ P
Sbjct: 201 LLACAPTGSGKTAAYLIPVLQGYCERFLTTDTELEVKQSLQPTPSETPHRIALFSLILAP 260
Query: 90 TRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFD--------------- 134
T+EL +Q ++E RLS GL H + + + + +S K D
Sbjct: 261 TQELVRQIWSEAARLSRGLA-GGHFVAYLSRRHYAYRGKSKHKVDSRENAKNAHTKLREL 319
Query: 135 -------VLITTPNKLVYLLQMDPP--ALNLANVEWLIVDESDKLFEAG----------- 174
+L+ TP+++ +LL +DP +++N+ WL++DE DK+ E
Sbjct: 320 RLPRSTRILVATPSRMAFLLSLDPSLCPFDVSNLAWLVLDEYDKMLEVDVTNANSLSSKK 379
Query: 175 ----VRGFRDQLAVIYAACSG--------PNLKRGMFSATHTEDVAKWCRRKL 215
VR FRDQ+ I+ A S PN+ MFSAT ++V W + +L
Sbjct: 380 MRHRVRSFRDQINPIFHALSKARSISGRQPNV--AMFSATVPDEVVNWAQSEL 430
>gi|401885525|gb|EJT49639.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
gi|406694842|gb|EKC98161.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 804
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 16/185 (8%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNE 100
L+ LGR I A TGSGKTAAF+IPI+ L RG R +++CPTRELA Q
Sbjct: 241 LALLGRDILGSAVTGSGKTAAFMIPILERLQYRDRGKGGAACRVLVLCPTRELAVQCEQV 300
Query: 101 TVRLSE--GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L+E GL +R A ++G + A+ R+ D+LI TP +L+ L + P+ L
Sbjct: 301 GKALAERGGLDVRFALLVGGLSLNAQAHALRTLP--DILIATPGRLIDHL-TNTPSFTLG 357
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++ L++DE+D++ EA GF D+L I C P ++ M FSAT T+ V + + L
Sbjct: 358 ALDILVIDEADRMLEA---GFTDELEEIVRQC--PRGRQTMLFSATMTDSVDELVKLSLD 412
Query: 217 RRVQI 221
R V++
Sbjct: 413 RPVRV 417
>gi|340506877|gb|EGR32929.1| hypothetical protein IMG5_066580 [Ichthyophthirius multifiliis]
Length = 847
Score = 97.1 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/183 (39%), Positives = 101/183 (55%), Gaps = 22/183 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQ------TYNET 101
GR I AC+ TGSGKTAAF+IP+++ L+ + +G RA+IV PTRELA Q ++ +
Sbjct: 48 GRDIVACSRTGSGKTAAFVIPLVNKLQTHSRTVGARALIVLPTRELALQITSVLKSFIKF 107
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
L+ L + H + G+ + A P D+LI TP +L L+ D L L VE
Sbjct: 108 TDLTYSLLVGGHNLEGQFESLAGN--P------DILIVTPGRLSQLI--DETGLTLNKVE 157
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
+LI DE D LFE GF DQ+ I S N + MFSAT E+++ + R LK V
Sbjct: 158 FLIFDECDYLFEM---GFADQMKTILKKVS-QNRQTLMFSATIPEELSSFARAGLKEYVF 213
Query: 221 INV 223
+ +
Sbjct: 214 VKL 216
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 261 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKF 320
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S+ G+R + E+F A D+++ TP +L+ LL+M ALN++ +L++
Sbjct: 321 SKSHGIRVSAVYGGMSKLEQFKELKA-GCDIVVATPGRLIDLLKM--KALNMSKATYLVL 377
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 378 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILSDPIRVTVG 433
>gi|328865714|gb|EGG14100.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 1076
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 8/165 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L + +G RA+I+ PTRELA QTY LS G
Sbjct: 305 GQDVVGMARTGSGKTAAFVIPMIQKLAQHSHKVGARAIILSPTRELALQTYRVVKELSSG 364
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR+ VI A++F A+ D++I TP +LV+ L + L V++++ DE+
Sbjct: 365 SDLRSCVIVGGDNMADQF-TELARNPDIIIATPGRLVHHLT--EVNMGLHTVQYIVFDEA 421
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
D+LFE GF DQL I S P+ + +FSAT +A++ R
Sbjct: 422 DRLFEM---GFADQLQEIITKLS-PSRQTLLFSATLPSMLAEFVR 462
>gi|384247417|gb|EIE20904.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 15/183 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPII-----HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
R++ APTGSGKT A+L+PII +L+G + G +A++V PTRELA Q RL
Sbjct: 60 REVLCVAPTGSGKTLAYLLPIIIQAKLGALKGRE--GVKALLVGPTRELAAQIARVLTRL 117
Query: 105 SEGLGLRAHVIGKIQ-QAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+GL L ++ A F + D+++ TP +L L + + ++VE+L+
Sbjct: 118 VKGLHLHCCLLSAAGVTAGTDFTKVLLLQMDIVVATPLRLSKLAK----KADFSSVEFLV 173
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+DKL + +GF Q+ + AAC+ P FSAT E V + R LK+ V++ V
Sbjct: 174 FDEADKLLD---QGFVTQMDKVVAACTNPRRVAAFFSATLPEKVEELARSLLKQPVRVTV 230
Query: 224 GLR 226
G R
Sbjct: 231 GER 233
>gi|307104599|gb|EFN52852.1| hypothetical protein CHLNCDRAFT_26393, partial [Chlorella
variabilis]
Length = 313
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF+IP++ L+ G RAVI+ PTRELA QT+ L
Sbjct: 3 GLDVVGMARTGSGKTAAFVIPLVERLKEHSARAGARAVILSPTRELALQTHKVVKELGRH 62
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR V+ +F +A D+L+ TP +L++ LQ + ++L + E+L+ DE+
Sbjct: 63 SNLRTAVLVGGDSMEAQFAELAAFP-DILVATPGRLMHHLQ-EVEGMSLRSCEYLVFDEA 120
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF +QL I A+ GP+ + +FSAT + +A++ R LK
Sbjct: 121 DRLFEM---GFAEQLRQILASV-GPSRQTLLFSATMPKALAEFARAGLK 165
>gi|291001203|ref|XP_002683168.1| predicted protein [Naegleria gruberi]
gi|284096797|gb|EFC50424.1| predicted protein [Naegleria gruberi]
Length = 358
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 98/181 (54%), Gaps = 18/181 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ APTGSGKT AF +P++ L PK GFR +I+ PT+ LA Q + L G
Sbjct: 19 KDCLVAAPTGSGKTVAFCLPMLCLLGKPKKEGFRGLIITPTKVLADQIFRNLEVLGSGKD 78
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
KI + KF +++ D+LI+TP +L+ +++ ++L NVE L+ DE+D+
Sbjct: 79 W------KILRDNHKF---QSKRNDILISTPMRLLSMIKSG--IIDLTNVEMLVFDEADR 127
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT---HTEDVAKWCRRKLK-RRVQINVGL 225
LF+ GF +Q+ I C+ PNL + FSAT E K LK VQ+++G+
Sbjct: 128 LFDL---GFIEQVDEILGFCTNPNLVKTYFSATIPLSLEHTLKTQTSLLKIDSVQVSIGV 184
Query: 226 R 226
R
Sbjct: 185 R 185
>gi|326433402|gb|EGD78972.1| hypothetical protein PTSG_01945 [Salpingoeca sp. ATCC 50818]
Length = 845
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A TGSGKT AFLIP++ L R ++LG AV+V PTRELA+QTYN V+++
Sbjct: 92 GRDVLGAAKTGSGKTLAFLIPVLEKLNRERFSRDLGIGAVVVSPTRELAQQTYNTLVQVA 151
Query: 106 EGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
G + A IG EK A +++I TP +LV + + P N++ L++
Sbjct: 152 TGHEMSCALFIGGNNVKIEKT---MAATRNIIICTPGRLVQHMD-ETPNFGFDNLQVLVL 207
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D+L ++ GF++++ I + P+ + +FSAT T +V + R L V INV
Sbjct: 208 DEADRLLDS---GFKEEVDRIVSEMP-PHRQTLLFSATQTAEVDELARLSLHNPVFINV 262
>gi|320162646|gb|EFW39545.1| ATP-dependent RNA helicase DRS1 [Capsaspora owczarzaki ATCC 30864]
Length = 924
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 18/167 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+GR + ACA TGSGKTAAFL+P++ L R N R +++ PTRELA Q + +L+
Sbjct: 378 MGRDLVACAKTGSGKTAAFLLPVLERLLYRQKTNPASRVLVLSPTRELAVQCHAMGEKLA 437
Query: 106 EGLGLRAHVI-----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ +R +I K QQA + P DV++ TP +L+ LQ + P +L +E
Sbjct: 438 KFTDIRMSLICGGFSTKRQQAELRAHP------DVIVATPGRLIDHLQ-NSPGFDLEGIE 490
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
LI+DE+D+L E GF++++ I CS + + +FSAT T++V
Sbjct: 491 VLIMDEADRLLEM---GFKEEVDEIIRQCS-VSRQTMLFSATMTDEV 533
>gi|405120234|gb|AFR95005.1| ATP-dependent RNA helicase DRS1 [Cryptococcus neoformans var.
grubii H99]
Length = 813
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 16/187 (8%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNE 100
L+ LGR I A TGSGKTAAF++PI+ L RG R +++CPTRELA Q
Sbjct: 237 LALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAV 296
Query: 101 TVRLSE--GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L+E GL +R A ++G + A+ R+ D+LI TP +L+ L + P+ L+
Sbjct: 297 GKALAEKGGLDVRFALLVGGLSLNAQAHTLRTLP--DILIATPGRLIDHL-TNTPSFTLS 353
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++ L++DE+D++ EA GF D+L I AC P ++ M FSAT T+ V + + L
Sbjct: 354 ALDVLVIDEADRMLEA---GFTDELEEIIKAC--PRSRQTMLFSATMTDSVDELVKLSLD 408
Query: 217 RRVQINV 223
+ +++ V
Sbjct: 409 KPIRVFV 415
>gi|308497817|ref|XP_003111095.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
gi|308240643|gb|EFO84595.1| hypothetical protein CRE_03900 [Caenorhabditis remanei]
Length = 749
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 18/180 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG-FRAVIVCPTRELAKQTYNETVRLSE 106
G+ I ACA TG+GKTAAF++PI+ + PK R +++ PTRELA Q + +LS
Sbjct: 192 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 251
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L + K Q+AA + GP DV++ TP +L+ L + P NL ++E
Sbjct: 252 FIQLEVCLCAGGLDLKAQEAALRSGP------DVVVATPGRLIDHLH-NSPNFNLGSIEV 304
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ E FRDQ+ + C+ N + +FSAT TE++ + L+R V+I
Sbjct: 305 LVLDEADRMLE---EAFRDQMNELIRLCA-ENRQTLLFSATMTEEIDELASMSLQRPVKI 360
>gi|348665957|gb|EGZ05785.1| hypothetical protein PHYSODRAFT_533185 [Phytophthora sojae]
Length = 2125
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 15/205 (7%)
Query: 32 IFKH-FEPHFTITYLS-PL---GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGF 82
I KH FE F I + P GR + A TGSGKT AFL+P+ H L P +N G
Sbjct: 1539 IKKHGFEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILAQPPLQENEGP 1598
Query: 83 RAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNK 142
+I+ P RELA+Q Y ET + S+GLGLRA + +E+ + D++I TP +
Sbjct: 1599 IGIIMAPARELAQQIYMETRKFSKGLGLRATAVYGGSSVSEQIA-NLKRGSDIVICTPGR 1657
Query: 143 LVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSA 201
++ +L M + +L V ++++DE+D++F+ GF Q+ I P+ + +FSA
Sbjct: 1658 MIDILCMSAGKMVSLQRVTYVVLDEADRMFDM---GFEPQITKIMMNIR-PDRQTLLFSA 1713
Query: 202 THTEDVAKWCRRKLKRRVQINVGLR 226
T V R+ L++ V+I VG R
Sbjct: 1714 TFPRSVESLARKVLRKPVEITVGTR 1738
>gi|321257748|ref|XP_003193695.1| ATP-dependent RNA helicase [Cryptococcus gattii WM276]
gi|317460165|gb|ADV21908.1| ATP-dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 790
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 16/185 (8%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNE 100
L+ LGR I A TGSGKTAAF++PI+ L RG R +++CPTRELA Q
Sbjct: 237 LALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAV 296
Query: 101 TVRLSE--GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L+E GL +R A ++G + A+ R+ D+LI TP +L+ L + P+ L+
Sbjct: 297 GKALAEKGGLDVRFALLVGGLSLNAQAHTLRTLP--DILIATPGRLIDHL-TNTPSFTLS 353
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++ L++DE+D++ EA GF D+L I AC P ++ M FSAT T+ V + + L
Sbjct: 354 ALDVLVIDEADRMLEA---GFTDELEEIIKAC--PRSRQTMLFSATMTDSVDELVKLSLD 408
Query: 217 RRVQI 221
+ +++
Sbjct: 409 KPIRV 413
>gi|385303290|gb|EIF47375.1| putative dead box atp-dependent rna helicase [Dekkera bruxellensis
AWRI1499]
Length = 235
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 12/160 (7%)
Query: 56 APTGSGKTAAFLIPIIHSLR--GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAH 113
A TGSGKTAAFL+P+I LR PK +G RA+++ PTRELA QTY + S+G G+R+
Sbjct: 2 ARTGSGKTAAFLVPLIEKLRQHSPK-IGVRAIVLSPTRELAIQTYRQLXEFSKGTGIRSL 60
Query: 114 VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDESDKLFE 172
++ ++F D +I TP +L++L ++M L+L VE+++ DE+D+LFE
Sbjct: 61 LLVGGDSLEDQFSAMMDNP-DAVIATPGRLLHLQVEM---RLSLKTVEYIVYDEADRLFE 116
Query: 173 AGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
GF +QL I AC + +FSAT +++ ++ +
Sbjct: 117 M---GFSEQLNEIL-ACLPDERQSLLFSATLPKNLVEFAK 152
>gi|58266632|ref|XP_570472.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110998|ref|XP_775963.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818015|sp|P0CQ93.1|DRS1_CRYNB RecName: Full=ATP-dependent RNA helicase DRS1
gi|338818016|sp|P0CQ92.1|DRS1_CRYNJ RecName: Full=ATP-dependent RNA helicase DRS1
gi|50258629|gb|EAL21316.1| hypothetical protein CNBD3700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226705|gb|AAW43165.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 808
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 16/187 (8%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNE 100
L+ LGR I A TGSGKTAAF++PI+ L RG R +++CPTRELA Q
Sbjct: 255 LALLGRDILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAV 314
Query: 101 TVRLSE--GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L+E GL +R A ++G + A+ R+ D+LI TP +L+ L + P+ L+
Sbjct: 315 GKALAEKGGLDVRFALLVGGLSLNAQAHTLRTLP--DILIATPGRLIDHL-TNTPSFTLS 371
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++ L++DE+D++ EA GF D+L I AC P ++ M FSAT T+ V + + L
Sbjct: 372 ALDVLVIDEADRMLEA---GFTDELEEIIKAC--PRSRQTMLFSATMTDSVDELVKLSLD 426
Query: 217 RRVQINV 223
+ +++ V
Sbjct: 427 KPIRVFV 433
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 95.5 bits (236), Expect = 2e-17, Method: Composition-based stats.
Identities = 64/182 (35%), Positives = 104/182 (57%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L RG K R +++ PTRELA Q + +
Sbjct: 244 LGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLVLVPTRELAVQCFEVGTK 303
Query: 104 LSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ +R+ V+G + A++ R+ + DV+I TP +L+ L+ + P L ++ L
Sbjct: 304 LAAHTDIRSCLVVGGLSLKAQEASLRT--RPDVVIATPGRLIDHLR-NSPTFTLEALDIL 360
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ E GF D+L I +C P ++ M FSAT T+ V + R L + V++
Sbjct: 361 VLDEADRMLE---DGFSDELTEIIKSC--PTSRQTMLFSATMTDTVDELVRMSLNKPVRL 415
Query: 222 NV 223
V
Sbjct: 416 FV 417
>gi|255712653|ref|XP_002552609.1| KLTH0C08866p [Lachancea thermotolerans]
gi|238933988|emb|CAR22171.1| KLTH0C08866p [Lachancea thermotolerans CBS 6340]
Length = 972
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 89/141 (63%), Gaps = 9/141 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+G +G RAVI+ P+RELA QT+ S G
Sbjct: 160 RDIVGMARTGSGKTAAFVLPMIEKLKGHSAKIGARAVILSPSRELAMQTHKVFREFSRGS 219
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ + E+FG + DV+I TP + ++L ++M+ L+L +VE+L+ DE+
Sbjct: 220 DLRSVLLTGGESLEEQFGLMMSNP-DVVIATPGRFLHLKVEMN---LDLKSVEYLVFDEA 275
Query: 168 DKLFEAGVRGFRDQLAVIYAA 188
D+LFE GF +QL+ + AA
Sbjct: 276 DRLFEM---GFEEQLSELLAA 293
>gi|354548000|emb|CCE44735.1| hypothetical protein CPAR2_405390 [Candida parapsilosis]
Length = 914
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 90/157 (57%), Gaps = 13/157 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF++P+I L+ + G RAVI+ P+RELA QTY + S G
Sbjct: 129 NRDVVGMARTGSGKTAAFVLPLIEKLKSRRPTGVRAVILSPSRELALQTYKQVKEFSRGT 188
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIVD 165
L++ V+ E FG + K D+++ TP + ++L +Q D L+ VE+++ D
Sbjct: 189 DLQSIVLIGGDSLEEDFG-KMVTKPDIIVCTPGRFLHLKVEMQYD-----LSTVEYIVFD 242
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE GF +QL + A N + +FSAT
Sbjct: 243 EADRLFEM---GFAEQLNELLLALPS-NRQSLLFSAT 275
>gi|301118572|ref|XP_002907014.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108363|gb|EEY66415.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 2091
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 10/183 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P +N G +I+ P RELA+Q Y E +
Sbjct: 1527 GRDVIGIAKTGSGKTLAFLLPMFRHVLAQPPLQENEGPIGIIMAPARELAQQIYVEARKF 1586
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEWLI 163
S+GLGLRA + +E+ + D++I TP +++ +L M + +L V +++
Sbjct: 1587 SKGLGLRATAVYGGSSVSEQIA-NLKRGSDIVICTPGRMIDILCMSAGKMVSLQRVTYVV 1645
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V R+ LK+ V+I V
Sbjct: 1646 LDEADRMFDM---GFEPQITKIMMNIR-PDRQTLLFSATFPRSVESLARKVLKKPVEITV 1701
Query: 224 GLR 226
G R
Sbjct: 1702 GTR 1704
>gi|255726598|ref|XP_002548225.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
gi|240134149|gb|EER33704.1| hypothetical protein CTRG_02522 [Candida tropicalis MYA-3404]
Length = 929
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKTAAF++P+I L+ + G RA+I+ P+RELA QTY + S G
Sbjct: 148 GRDVVGMARTGSGKTAAFVLPLIEQLKSRQTNGVRAIIISPSRELALQTYKQVKEFSNGT 207
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ V+ E F + K DV++ TP + ++L ++M+ +L V +++ DE+
Sbjct: 208 NLKSIVLIGGDSLEEDFS-KMMTKPDVIVCTPGRFLHLKVEME---YDLKTVRYIVFDEA 263
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + A+ N + +FSAT
Sbjct: 264 DRLFEM---GFAEQLNELIASLP-TNRQSLLFSAT 294
>gi|164660112|ref|XP_001731179.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
gi|159105079|gb|EDP43965.1| hypothetical protein MGL_1362 [Malassezia globosa CBS 7966]
Length = 638
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 22/178 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
G+ I A A TGSGKTAAFLIPI+ L R + R V++CPTRELA Q ++ L
Sbjct: 114 GKDIVAGAVTGSGKTAAFLIPIMERLSYRQRSADDAKSRVVVLCPTRELAIQCHSVAQAL 173
Query: 105 SEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+ + +R +G K+Q+A K P DV+I TP +L+ ++ + + + +V
Sbjct: 174 GKFMNVRFCLCVGGLSLKLQEAELKTRP------DVIIATPGRLIDHVR-NSASFGMEDV 226
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
E L++DE+D++ E GF D+L I C P ++ M FSAT TEDV + R L+
Sbjct: 227 EILVMDEADRMLED---GFEDELNEIVRLC--PKQRQTMLFSATMTEDVDQLVRLSLR 279
>gi|392571875|gb|EIW65047.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 576
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 105/184 (57%), Gaps = 13/184 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+P++ +L + G RA+I+ PTRELA Q +NE +
Sbjct: 160 RDLAAISPTGTGKTLSYLLPVMAALGAPAASAKSDAGSGVRAIILAPTRELAHQIHNECL 219
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+L++G R + K A K K D++I+TP +LV L+ L L NV +
Sbjct: 220 KLAQGRKWRIVLFSKATAATMK-DKTVRDKIDLVISTPLRLVASLKAG--HLELGNVRHI 276
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ + F +Q+ + AAC+ P++++ +FSAT + K L+ +++
Sbjct: 277 VLDEADRMLDT---EFLEQVEEVIAACTYPDVQKAVFSATLPANAEKVALSMLRDPIRVV 333
Query: 223 VGLR 226
VGL+
Sbjct: 334 VGLK 337
>gi|409051554|gb|EKM61030.1| hypothetical protein PHACADRAFT_24252 [Phanerochaete carnosa
HHB-10118-sp]
Length = 793
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ I A TGSGKTAAF+IP+I L RG K R +++ PTREL Q Y +
Sbjct: 230 LGKDIVGNAVTGSGKTAAFMIPMIERLMYRERGKKAAATRCMVLVPTRELGVQCYEVGTK 289
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ +R V+G + +++ R+ + D++I TP +L+ ++ + P L ++ L
Sbjct: 290 LAAHTDIRFCLVVGGLSLKSQEVALRT--RPDIIIATPGRLIDHIR-NTPTFTLDTLDIL 346
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF+D+LA I +C P ++ M FSAT T+ V + R L + V++
Sbjct: 347 VLDEADRMLS---EGFQDELAEIIKSC--PVSRQTMLFSATMTDSVDELVRMSLNQPVRL 401
Query: 222 NV 223
V
Sbjct: 402 FV 403
>gi|150866736|ref|XP_001386424.2| hypothetical protein PICST_80003 [Scheffersomyces stipitis CBS
6054]
gi|158514831|sp|A3LZT3.2|DBP10_PICST RecName: Full=ATP-dependent RNA helicase DBP10
gi|149387992|gb|ABN68395.2| ATP dependent RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 931
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAF +P+I L+G +G RA+I+ P+RELA QTY + S+G
Sbjct: 136 NRDVVGMARTGSGKTAAFTLPVIEKLKGHSARVGIRAIILSPSRELALQTYKQVKEFSKG 195
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LRA V+ ++F + D++I TP + ++L ++M L+L VE+++ DE
Sbjct: 196 SDLRAIVLTGGDSLEDQFSSMVSNP-DIVIATPGRFLHLQVEM---QLDLKTVEYIVFDE 251
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D LFE +GF +QL + A P + +FSAT
Sbjct: 252 ADHLFE---QGFAEQLNELLAVLP-PQRQSLLFSAT 283
>gi|410730255|ref|XP_003671307.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
gi|401780125|emb|CCD26064.2| hypothetical protein NDAI_0G02870 [Naumovozyma dairenensis CBS 421]
Length = 991
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/176 (35%), Positives = 101/176 (57%), Gaps = 10/176 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I ++ +G RAVI+ P+RELA QT+N S+G
Sbjct: 168 RDIVGMARTGSGKTAAFILPMIRKIKTHSSKIGARAVILSPSRELAMQTHNVFKEFSKGT 227
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++FG DV+I TP + ++L ++M +L+L ++E+ + DE+
Sbjct: 228 QLRSVLLTGGDSLEDQFG-MMMNNPDVIIATPGRFLHLKVEM---SLDLKSIEYAVFDEA 283
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
D+LFE GF+DQL + A+ N + +FSAT + + + L V + +
Sbjct: 284 DRLFEM---GFQDQLNELLASLPS-NRQTLLFSATLPSSLVDFAKAGLTNPVLVRL 335
>gi|325179957|emb|CCA14359.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 843
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 62/181 (34%), Positives = 106/181 (58%), Gaps = 12/181 (6%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLGFRAVIVCPTRELAKQTYNETV 102
++ LG+ I A A TGSGKTAAFL+PI+ LR + R +I+CP RELA Q + +
Sbjct: 249 MALLGKDICASAQTGSGKTAAFLLPILERLQLRTRRIAATRVIIICPVRELATQCQSVLI 308
Query: 103 RLSEGLGL-RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L+ + A V+G + A++ R+ D+++ TP +++ L+ + P+++L ++E
Sbjct: 309 KLARFTDITSALVVGGLPLKAQELELRTCP--DIIVCTPGRMIDHLR-NSPSVHLDSLEI 365
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQ 220
L++DE+D+L E GF +++ I C P ++ M FSAT T + + +KR V+
Sbjct: 366 LVLDEADRLLEL---GFTEEIQEIVRMC--PRARQTMLFSATMTSKIDQLIALSMKRPVR 420
Query: 221 I 221
I
Sbjct: 421 I 421
>gi|392578431|gb|EIW71559.1| hypothetical protein TREMEDRAFT_27480 [Tremella mesenterica DSM
1558]
Length = 786
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 16/187 (8%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNE 100
L+ LGR I A TGSGKTAAF++PI+ L RG R +I+CPTRELA Q
Sbjct: 239 LALLGRDILGSAVTGSGKTAAFMVPILERLTYRERGRGGQACRVLILCPTRELAVQCEEF 298
Query: 101 TVRLSE--GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+LS GL +R A ++G + A+ R+ D+LI TP +L+ L + P+ L+
Sbjct: 299 GKKLSTQGGLNIRFALLVGGLSLNAQAQNLRTLP--DILIATPGRLIDHL-TNTPSFTLS 355
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++ L++DE+D++ EA GF D+L I +C P ++ M FSAT T+ V + + L
Sbjct: 356 ALDVLVIDEADRMLEA---GFTDELNEIVRSC--PRGRQTMLFSATMTDSVDELVKLSLD 410
Query: 217 RRVQINV 223
+ +++ V
Sbjct: 411 KPIRLFV 417
>gi|118360242|ref|XP_001013358.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|89295125|gb|EAR93113.1| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 1130
Score = 94.4 bits (233), Expect = 3e-17, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 22/183 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQ------TYNET 101
GR + AC+ TGSGKTAAF+IP+I+ L+ + +G RA+IV PTRELA Q T+ +
Sbjct: 336 GRDVVACSRTGSGKTAAFIIPLINKLQNHSRIVGARALIVVPTRELALQIASVLKTFIKF 395
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
L+ L + H + G+ + A P D++I TP +L L+ D L+L VE
Sbjct: 396 TDLTYTLIVGGHGLEGQFESLASN--P------DIIIATPGRLSQLI--DETDLSLNKVE 445
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
+LI DE D LFE GF DQ+ I S + MFSAT E+++ + R LK V
Sbjct: 446 FLIFDECDYLFEM---GFADQMKTILKKVS-QQRQTLMFSATIPEELSSFARAGLKEYVF 501
Query: 221 INV 223
+ +
Sbjct: 502 VKL 504
>gi|449302774|gb|EMC98782.1| hypothetical protein BAUCODRAFT_120082 [Baudoinia compniacensis
UAMH 10762]
Length = 699
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 27/202 (13%)
Query: 43 TYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPK-------NLGFRAVIVCPTRELAK 95
T P G + APTGSGKT AFL+P++H R + N +A+I+ PT+EL
Sbjct: 208 TESGPYGLDMLTVAPTGSGKTLAFLVPLVHKARHQRRTKVVGDNGQAKAIILAPTKELVS 267
Query: 96 QTYNETVRLSEGLGLRAHVI--------------GKIQQAAE--KFGPRSAQKFDVLITT 139
Q NE +L++G G+R + G + AA+ G R+ + D+L++T
Sbjct: 268 QIVNEGRKLTQGTGVRVVQLRKGMRLIARNDSDRGTVAAAADAPSSGVRTIVRADILVST 327
Query: 140 PNKLVYLLQMDP-PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM 198
P L +L+ D + +L NV LI+DE+D L + FR+Q + + P L+ +
Sbjct: 328 PGLLHAMLRDDEISSADLVNVSSLILDEADVLLDP---LFREQTLSTWDNLNNPELRVSL 384
Query: 199 FSATHTEDVAKWCRRKLKRRVQ 220
+SAT ++ + R L+RR++
Sbjct: 385 WSATMGSNIEELTRSTLERRLK 406
>gi|348686378|gb|EGZ26193.1| hypothetical protein PHYSODRAFT_555670 [Phytophthora sojae]
Length = 698
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 26/181 (14%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLS 105
L R + A APTGSGKTAAF IPI+ +L G R++++ PTR+LA Q +E RL+
Sbjct: 291 LRRDVLATAPTGSGKTAAFAIPILANLAAGSGTGSGIRSIVLAPTRDLAVQIRSEFTRLA 350
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
G L ++ K A + T +K+ A++L+ VE + +D
Sbjct: 351 AGKKLHITLLSKATAAT------------IASQTKSKM---------AVDLSTVEMVCLD 389
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D+L E GF +Q+ I+AAC+ ++R MFSAT E V + + L+ V++ VG
Sbjct: 390 EADRLLEL---GFVEQVDEIFAACTHAKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGT 446
Query: 226 R 226
+
Sbjct: 447 K 447
>gi|198423018|ref|XP_002125988.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
[Ciona intestinalis]
Length = 718
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LGR I ACA TG+GKTAAF++P++ L R R + + PTRELA Q Y+ T L+
Sbjct: 207 LGRDICACAATGTGKTAAFMLPVLERLLYRTQSTPITRVLCLVPTRELAVQVYSVTHHLA 266
Query: 106 EGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ LR + K Q+AA + GP D++I TP +L+ L + P+ +L VE
Sbjct: 267 QHSNLRICLAAGGLDMKSQEAALRQGP------DIVIATPGRLIDHLH-NTPSFDLQMVE 319
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F DQ+ I CS + + +FSAT +E V + LK V+
Sbjct: 320 ILILDEADRMLD---EFFEDQMNEIIKLCSH-HRQTMLFSATMSEQVQELAAVSLKNPVK 375
Query: 221 INVG 224
I V
Sbjct: 376 IFVN 379
>gi|320168199|gb|EFW45098.1| DEAD box polypeptide 49 [Capsaspora owczarzaki ATCC 30864]
Length = 611
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 8/161 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + CA TGSGKTAAF +PI+H L G AV++ PTRELA Q + L +G+
Sbjct: 215 GRNVIGCAKTGSGKTAAFALPILHRL-SDDPYGPFAVVLTPTRELAFQIAEQFRALGKGI 273
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR A V+G + + A++ V+I TP +L L + L+LA +L++DE+
Sbjct: 274 NLREAVVVGGVDMMQQSL--VLAKRPHVIIATPGRLADHLNSN-SQLSLARARFLVLDEA 330
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVA 208
D+L E GF L I AA S P + +FSAT T+++A
Sbjct: 331 DRLLE---EGFSPDLNRILAAASNPQRQTLLFSATITKNIA 368
>gi|149241448|ref|XP_001526316.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013474|sp|A5DZT7.1|DBP10_LODEL RecName: Full=ATP-dependent RNA helicase DBP10
gi|146450439|gb|EDK44695.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 13/177 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + A TGSGKTAAF++P+I L+ G RAVI+ P+RELA QTY + S G
Sbjct: 159 RDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTN 218
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIVDE 166
L++ V+ E FG + K D+++ TP + ++L +Q D L +V++++ DE
Sbjct: 219 LQSIVLIGGDSLEEDFG-KMMTKPDIIVCTPGRFLHLKVEMQYD-----LMSVQYIVFDE 272
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE GF +QL + A N + +FSAT + ++ + L V + +
Sbjct: 273 ADRLFEM---GFAEQLNELLLALPS-NRQSLLFSATLPRSLVEFAKAGLTNPVLVRL 325
>gi|294875674|ref|XP_002767430.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
gi|239868997|gb|EER00148.1| ATP-dependent RNA helicase dbp10, putative [Perkinsus marinus ATCC
50983]
Length = 952
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I +L+G +G RAVI+ PTRELA QT T L +
Sbjct: 60 GSDVVAMARTGSGKTAAFVIPMIQTLKGHSEVVGARAVILSPTRELAMQTIKVTRMLGKF 119
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVDE 166
LR +I +F R + DVLI TP +LV ++++ D L+L V++++ DE
Sbjct: 120 TDLRLCLIVGGHSMESQFD-RLSSNPDVLICTPGRLVHHMVEAD---LSLQRVQYIVFDE 175
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF D + I A P+ + +FSAT + ++ R L+
Sbjct: 176 ADRLFEM---GFSDDMQTILKATP-PSRQCLLFSATLPSQLTQFSRAGLR 221
>gi|330443505|ref|NP_010253.2| Dbp10p [Saccharomyces cerevisiae S288c]
gi|341940422|sp|Q12389.2|DBP10_YEAST RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|329138871|tpg|DAA11821.2| TPA: Dbp10p [Saccharomyces cerevisiae S288c]
gi|392300086|gb|EIW11177.1| Dbp10p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 995
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 175 RDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGT 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 235 ELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 290
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + A S P ++ +FSAT
Sbjct: 291 DRLFEM---GFQEQLNELLA--SLPTTRQTLLFSAT 321
>gi|259145212|emb|CAY78476.1| Dbp10p [Saccharomyces cerevisiae EC1118]
gi|349577043|dbj|GAA22212.1| K7_Dbp10p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 995
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 175 RDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGT 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 235 ELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 290
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + A S P ++ +FSAT
Sbjct: 291 DRLFEM---GFQEQLNELLA--SLPTTRQTLLFSAT 321
>gi|160380606|sp|A6ZXU0.1|DBP10_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP10; AltName: Full=DEAD
box protein 10
gi|151941964|gb|EDN60320.1| DEAD box protein [Saccharomyces cerevisiae YJM789]
gi|190405046|gb|EDV08313.1| hypothetical protein SCRG_00534 [Saccharomyces cerevisiae RM11-1a]
gi|256269702|gb|EEU04973.1| Dbp10p [Saccharomyces cerevisiae JAY291]
Length = 995
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 175 RDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGT 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 235 ELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 290
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + A S P ++ +FSAT
Sbjct: 291 DRLFEM---GFQEQLNELLA--SLPTTRQTLLFSAT 321
>gi|363740165|ref|XP_003642273.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Gallus gallus]
Length = 858
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 93/155 (60%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTA FL+P+ L+ P G RA+I+ PTRELA QT T L +
Sbjct: 109 GRDVVAMARTGSGKTACFLLPMFERLKAPSPSGARALILSPTRELALQTLKFTKELGKFT 168
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
GL+ ++ + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE+
Sbjct: 169 GLKTALVLGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDEA 224
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL I A G + + +FSAT
Sbjct: 225 DRLFEM---GFAEQLQEILARLPGSH-QTVLFSAT 255
>gi|254566739|ref|XP_002490480.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238030276|emb|CAY68199.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328350871|emb|CCA37271.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 1003
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAFL+P++ L+ +G RA+I+ P+RELA QT+ + S G
Sbjct: 153 RDVVGMARTGSGKTAAFLLPLVEKLKVHSAKVGIRAIILSPSRELAVQTFRQFKEFSRGT 212
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LRA ++ ++FG + DV+I TP + ++L ++M +L+L ++E+++ DE+
Sbjct: 213 NLRAMLLIGGDSMEDQFGAMMSNP-DVVIATPGRFLHLKVEM---SLDLKSIEYVVYDEA 268
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL + AA P+ ++ +FSAT
Sbjct: 269 DRLFEM---GFAEQLNELLAAL--PHRRQSLLFSAT 299
>gi|324505328|gb|ADY42291.1| ATP-dependent RNA helicase DDX27 [Ascaris suum]
Length = 688
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 30/186 (16%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGF-RAVIVCPTRELAKQTYNETVRLSE 106
GR + ACA TG+GKTAAF++PI+ L PK R +++ PTRELA Q ++ T LS+
Sbjct: 182 GRDLCACAATGTGKTAAFMLPILERLLFKPKQKSVTRVLVLVPTRELAMQVFHVTRLLSQ 241
Query: 107 -----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
GL ++A Q+AA + GP D++I TP +L+ L + P +
Sbjct: 242 FSQVEICLCAGGLDIKA------QEAALRLGP------DIVIATPGRLIDHLH-NAPNFS 288
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
L ++E L++DE+D++ + F DQ+ + CS N + +FSAT T+ + + L
Sbjct: 289 LHDIEVLVLDEADRMLD---EAFADQMKELIRLCSA-NRQTLLFSATMTDQIEQLAAVSL 344
Query: 216 KRRVQI 221
K V+I
Sbjct: 345 KNPVRI 350
>gi|294929941|ref|XP_002779431.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239888539|gb|EER11226.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 863
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 98/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I +L+G +G RAVI+ PTRELA QT T L +
Sbjct: 60 GSDVVAMARTGSGKTAAFVIPMIQTLKGHSEVVGARAVILSPTRELAMQTIKVTRMLGKF 119
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVDE 166
LR +I +F R + DVLI TP +LV ++++ D L+L V++++ DE
Sbjct: 120 TDLRLCLIVGGHSMESQFD-RLSSNPDVLICTPGRLVHHMVEAD---LSLQRVQYIVFDE 175
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF D + I A P+ + +FSAT + ++ R L+
Sbjct: 176 ADRLFEM---GFSDDMQTILKATP-PSRQCLLFSATLPSQLTQFSRAGLR 221
>gi|68465679|ref|XP_723201.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|68465972|ref|XP_723054.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|74680391|sp|Q5ANB2.1|DBP10_CANAL RecName: Full=ATP-dependent RNA helicase DBP10
gi|46445068|gb|EAL04339.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|46445224|gb|EAL04494.1| likely DEAD box ATP-dependent RNA helicase [Candida albicans
SC5314]
gi|238880918|gb|EEQ44556.1| hypothetical protein CAWG_02828 [Candida albicans WO-1]
Length = 908
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 13/157 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKTAAF++P+I L+ + G RAVI+ P+RELA QTY + S G
Sbjct: 136 GRDVVGMARTGSGKTAAFVLPLIERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGT 195
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIVD 165
L++ V+ E F + K D+++ TP + ++L +Q D L V++++ D
Sbjct: 196 NLQSIVLIGGDSLEEDFS-KMMTKPDIIVCTPGRFLHLKVEMQYD-----LMTVQYIVFD 249
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE GF +QL + A+ N + +FSAT
Sbjct: 250 EADRLFEM---GFAEQLNELLASLPS-NRQSLLFSAT 282
>gi|325179839|emb|CCA14242.1| Os08g0159900 putative [Albugo laibachii Nc14]
Length = 1173
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P + G +I+ P RELA+Q Y E R
Sbjct: 608 GRDVIGIAKTGSGKTLAFLLPMFRHILHQPPLKEGEGPIGLIMAPARELAQQIYVEAKRF 667
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP-PALNLANVEWLI 163
++ LGLRA + +E+ G + +++I TP +++ +L M ++L V +++
Sbjct: 668 AKDLGLRATAVYGGSSVSEQIG-NLKRGSEIVICTPGRMIDILCMSAGKVVSLQRVSYVV 726
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V R+ L + V+I V
Sbjct: 727 LDEADRMFDM---GFEPQITKIIMNIR-PDRQTLLFSATFPRAVETLARKVLLKPVEITV 782
Query: 224 GLR 226
G R
Sbjct: 783 GAR 785
>gi|393218427|gb|EJD03915.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 782
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 101/184 (54%), Gaps = 22/184 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L RG R V++ PTREL Q + +
Sbjct: 221 LGKDVVGNAVTGSGKTAAFMIPVLERLMYRERGKNKAAVRCVVLVPTRELGVQCVDVAKK 280
Query: 104 LSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
LS + +R + ++G K Q+A + P D++I TP +L+ L+ + P+ L
Sbjct: 281 LSAFMDVRISLIVGGLSLKSQEAELRTRP------DIVIATPGRLIDHLR-NSPSFGLET 333
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ LI+DE+D++ GF D+L I AC P ++ M FSAT T+DV R L R
Sbjct: 334 LDVLILDEADRMLSD---GFADELKEIIQAC--PTSRQTMLFSATMTDDVDALVRMSLNR 388
Query: 218 RVQI 221
V++
Sbjct: 389 PVKL 392
>gi|294658755|ref|XP_461087.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
gi|218512019|sp|Q6BL34.2|DBP10_DEBHA RecName: Full=ATP-dependent RNA helicase DBP10
gi|202953360|emb|CAG89469.2| DEHA2F16720p [Debaryomyces hansenii CBS767]
Length = 932
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF +P++ L+ +G RA+I+ P+RELA QT+ + S+G
Sbjct: 135 RDVVGMARTGSGKTAAFTLPLVEKLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGT 194
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ V+ E+F DV++ TP + ++L ++M+ L L VE+++ DE+
Sbjct: 195 DLRSIVLIGGDSLEEQFSSMMTNP-DVIVATPGRFLHLKVEME---LELKTVEYIVFDEA 250
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL + AA P+ ++ +FSAT
Sbjct: 251 DRLFEM---GFAEQLNELIAAL--PSSRQSLLFSAT 281
>gi|324503749|gb|ADY41623.1| ATP-dependent RNA helicase DDX54 [Ascaris suum]
Length = 799
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 92/155 (59%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF++P++ L+ + G RA+++ PTRELA QT+ T L
Sbjct: 75 GKDVVAMSRTGSGKTAAFVVPMLQKLKRREVNGTRALLIAPTRELALQTFKFTKELGRFT 134
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
GLR + E+FG +K D++I TP +L++L ++M+ L L V++L+ DE+
Sbjct: 135 GLRCAALVGGDSIEEQFGA-IHEKPDIIIATPGRLLHLIIEMN---LRLTTVQYLVFDEA 190
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL I N + +FSAT
Sbjct: 191 DRLFEM---GFSEQLHEILKRLPD-NRQTLLFSAT 221
>gi|340384313|ref|XP_003390658.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Amphimedon
queenslandica]
Length = 708
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TGSGKTAAFLIP+ L+ P+ G R +I+ PTRELA QT T L
Sbjct: 23 GKDVVAMARTGSGKTAAFLIPLFERLKSHSPQVSGVRGLILSPTRELALQTMKFTKELGR 82
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVD 165
GLRA VI + ++F + D++I TP + ++ LL+MD + L +VE+++ D
Sbjct: 83 FTGLRAAVILGGDRIEDQFSTMH-ENPDIIIATPGRFLHLLLEMD---MKLLHVEYVVFD 138
Query: 166 ESDKLFEAGVRGFRDQLAVI 185
E+D+LFE GF +QL I
Sbjct: 139 EADRLFEM---GFSEQLHEI 155
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
G I A TGSGKTAAF++P I+H + P K G V+ PTRELA Q Y ET +
Sbjct: 262 GSDIIGMAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLETKKF 321
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S+ G+R + ++F A +++I TP +L+ +L+M ALN++ +L++
Sbjct: 322 SKSHGIRVSAVYGGMSKLDQFKELKA-GCEIVIATPGRLIDMLKM--KALNMSRATYLVL 378
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT + K R L V++ VG
Sbjct: 379 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKIEKLAREILTDPVRVTVG 434
>gi|197123442|ref|YP_002135393.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. K]
gi|196173291|gb|ACG74264.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp. K]
Length = 478
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 112/220 (50%), Gaps = 25/220 (11%)
Query: 18 ISIIVTTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIPIIHSLR 75
+++ TL + + F+H P + P GR + A TG+GKTAAFL+PII L
Sbjct: 12 LNLSEKTLQALERAGFEHPTP-IQAQAIPPALGGRDVIGAAATGTGKTAAFLLPIIERLA 70
Query: 76 G--PKNL--------GFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAAEK 124
G PK+ G RA+++ PTRELA Q E R G +R A VIG + A+
Sbjct: 71 GGAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELERFGRGRHVRGALVIGGVGMGAQS 130
Query: 125 FGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAV 184
R +V++ TP +LV LQ L +E L++DE+D++ + GF QL
Sbjct: 131 AALRD---HEVIVATPGRLVDHLQQG--TARLDGLEVLVLDEADRMLDM---GFAPQLKR 182
Query: 185 IYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
I A P +++ +FSAT +VA + R L+ V++ V
Sbjct: 183 ILARV--PKVRQTLLFSATMAGEVADFARAHLRDPVRVEV 220
>gi|424513172|emb|CCO66756.1| PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein
7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr
virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48)
(Zinc finger protein [Bathycoccus prasinos]
Length = 991
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 13/143 (9%)
Query: 51 QIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGL 110
+ A APTGSGKT AFL+PI L K+ G RA+++ PT+ELA Q+ LS+GL
Sbjct: 529 ETLAVAPTGSGKTLAFLLPIFMRLGKRKDGGVRAILLAPTKELATQSTRICTLLSDGL-- 586
Query: 111 RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
++ Q ++ K D+LI+TP +L LL+ ++ VE+L++DE+DKL
Sbjct: 587 ------RVTQLSKANAANDFDKVDILISTPLRLASLLRQ--KKISTHAVEFLVLDEADKL 638
Query: 171 FEAGVRGFRDQLAVIYAACSGPN 193
FE GF +Q+ + AC P+
Sbjct: 639 FEM---GFVEQIDAVVHACDNPD 658
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 102/185 (55%), Gaps = 14/185 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF IPII L +G R ++V PTRELA Q + R
Sbjct: 222 LGKDVVGGAVTGSGKTAAFTIPIIERLLYRDKGKNAAATRCLVVVPTRELAVQCFEVGTR 281
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ +R V+G + +++ RS + DVLI TP +L+ L + P+ L ++ L
Sbjct: 282 MAGHTDVRFCLVVGGLSLKSQEAALRS--RPDVLIATPGRLIDHLH-NSPSFTLDALDIL 338
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ E GF D+L I AC P ++ M FSAT T+ V K R L + V+I
Sbjct: 339 VLDEADRMLED---GFADELTEIVKAC--PVSRQTMLFSATMTDSVDKLIRLSLTKPVRI 393
Query: 222 NVGLR 226
V +
Sbjct: 394 FVDAK 398
>gi|367045536|ref|XP_003653148.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
gi|347000410|gb|AEO66812.1| hypothetical protein THITE_2115255 [Thielavia terrestris NRRL 8126]
Length = 938
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 99/169 (58%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT L +G
Sbjct: 138 RDVVGMARTGSGKTAAFVIPMIERLKAHSARVGARALILSPSRELALQTLKVVKELGKGT 197
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 198 DLRTVLLVGGDSLEEQFGLMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 253
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 254 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 298
>gi|326929996|ref|XP_003211139.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Meleagris gallopavo]
Length = 831
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 93/155 (60%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTA FL+P+ L+ P G RA+I+ PTRELA QT T L +
Sbjct: 97 GRDVVAMARTGSGKTACFLLPMFERLKAPSPSGARALILSPTRELALQTLKFTKELGKFT 156
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
GL+ ++ + ++F + D++I TP +LV++ ++M+ L L ++E+++ DE+
Sbjct: 157 GLKTALVLGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLHSMEYVVFDEA 212
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL I A G + + +FSAT
Sbjct: 213 DRLFEM---GFAEQLQEILARLPGSH-QTVLFSAT 243
>gi|71999646|ref|NP_741347.2| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
gi|351051384|emb|CCD74206.1| Protein Y94H6A.5, isoform b [Caenorhabditis elegans]
Length = 871
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF+IP++ L+ G RA++V PTRELA QT+ L
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR + Q E+F + D+L+ TP +L++ +++MD L L+ V++++ DE+
Sbjct: 121 GLRCACLVGGDQIEEQFST-IHENPDILLATPGRLLHVIVEMD---LRLSYVQYVVFDEA 176
Query: 168 DKLFEAGVRGFRDQL 182
D+LFE GF+DQL
Sbjct: 177 DRLFEM---GFQDQL 188
>gi|302843242|ref|XP_002953163.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
gi|300261550|gb|EFJ45762.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
Length = 602
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 18/179 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVR-LSEG 107
GR++ A APTGSGKT AFL+PI+ LR ++ G P E K ++ L G
Sbjct: 282 GRELLAVAPTGSGKTLAFLVPILAGLRAARSRG-----EWP--EGVKALVARVLKLLLPG 334
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GLR ++ K A F K DVL+ P +LV +++ + LA ++++DE+
Sbjct: 335 TGLRGCLLTKSTAAGSDF-----SKVDVLLANPLRLVKMVEEG--KVQLAQCRYVVLDEA 387
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
DKLFE GF DQ+ + AA ++ R +FSAT E V R L++ ++I VGLR
Sbjct: 388 DKLFEL---GFMDQIDALLAAAQHRDVVRALFSATLPERVEDLARSVLQQPLRITVGLR 443
>gi|367013516|ref|XP_003681258.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
gi|359748918|emb|CCE92047.1| hypothetical protein TDEL_0D04630 [Torulaspora delbrueckii]
Length = 968
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 92/155 (59%), Gaps = 10/155 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RELA QT+ S G
Sbjct: 152 RDIVGLARTGSGKTAAFILPMIEKLKSHSSKVGARAVILSPSRELAMQTHKVFKDFSRGT 211
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+FG + DV++ TP + ++L ++M+ L+L ++E+ + DES
Sbjct: 212 HLRSVLLTGGDSLEEQFGMMMSNP-DVIVATPGRFLHLKVEMN---LDLKSIEYAVFDES 267
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + AA N + +FSAT
Sbjct: 268 DRLFEM---GFEEQLNELLAALPS-NRQTLLFSAT 298
>gi|45198439|ref|NP_985468.1| AFL080Wp [Ashbya gossypii ATCC 10895]
gi|74693084|sp|Q755A5.1|DBP3_ASHGO RecName: Full=ATP-dependent RNA helicase DBP3
gi|44984326|gb|AAS53292.1| AFL080Wp [Ashbya gossypii ATCC 10895]
gi|374108696|gb|AEY97602.1| FAFL080Wp [Ashbya gossypii FDAG1]
Length = 535
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 105/181 (58%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I+SL K+ G + +++ PTRELA Q Y+ V+L++
Sbjct: 160 GKDVIGVAETGSGKTFAFGVPAINSLMSEKSTPRGVKCLVISPTRELASQIYDNLVQLTD 219
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+GL V G +Q+ +++ + AQ V++ TP +L+ L++ + LA V++L++D
Sbjct: 220 KVGLNCCCVYGGVQKDSQREQLKKAQ---VVVATPGRLLDLIE--EGSAKLAGVQYLVLD 274
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + MF+AT ++V + ++ V++++G
Sbjct: 275 EADRMLE---KGFEEDIKRIIKETKSDVRQTLMFTATWPKEVRELASTFMRAPVKVSIGN 331
Query: 226 R 226
R
Sbjct: 332 R 332
>gi|254578362|ref|XP_002495167.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
gi|238938057|emb|CAR26234.1| ZYRO0B04972p [Zygosaccharomyces rouxii]
Length = 979
Score = 92.0 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RE+A QTY S+G
Sbjct: 161 RDIVGMARTGSGKTAAFVLPMIEKLKAHSSKIGARAVILSPSREIAMQTYKVFKEFSKGS 220
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++FG + DV++ TP + ++L ++M+ LNL +VE+ + DE+
Sbjct: 221 DLRSVLLTGGDSLEDQFGMMMSNP-DVVVATPGRFLHLKVEMN---LNLKSVEYAVFDEA 276
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL + A S P ++ +FSAT
Sbjct: 277 DRLFEM---GFAEQLNELLA--SLPEKRQTLLFSAT 307
>gi|410077309|ref|XP_003956236.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
gi|372462820|emb|CCF57101.1| hypothetical protein KAFR_0C01060 [Kazachstania africana CBS 2517]
Length = 973
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 97/157 (61%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P+I L+ +G RA+I+ P+RELA QT+N S+G
Sbjct: 158 SRDIVGMARTGSGKTAAFVLPMIEKLKTHSSKIGARAIILSPSRELAMQTHNVFKEFSKG 217
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ ++FG A DV+I TP + ++L ++M+ L+L +VE++ DE
Sbjct: 218 SDLRSVLLTGGDSLEDQFGMIMANP-DVIIATPGRFLHLKVEMN---LDLKSVEYICFDE 273
Query: 167 SDKLFEAGVRGFRDQL-AVIYAACSGPNLKRGMFSAT 202
+D+LFE GF++QL +IY+ S N + +FSAT
Sbjct: 274 ADRLFEM---GFQEQLNELIYSLPS--NRQTLLFSAT 305
>gi|393910125|gb|EJD75750.1| DEAD box polypeptide 27 [Loa loa]
Length = 684
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 30/190 (15%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETV 102
L+ GR + AC+ TG+GKTAAF++P++ L R + R V++ PTRELA QT+ +
Sbjct: 174 LALAGRDLCACSATGTGKTAAFMLPVLERLLYRPQQKAMTRVVVLTPTRELAIQTFQVSR 233
Query: 103 RLSE-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
+LS+ GL L K Q+AA + P D++I TP +L+ L +
Sbjct: 234 QLSQFMRIDICLCAGGLDL------KTQEAALRQRP------DIVIATPGRLIDHLH-NA 280
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
P +L NVE L++DE+D++ + F DQ+ I C+ N + +FSAT T+ V +
Sbjct: 281 PNFSLVNVEILVLDEADRMLDE---AFADQMKEIIHLCA-QNRQTMLFSATMTDQVEELA 336
Query: 212 RRKLKRRVQI 221
LK V++
Sbjct: 337 AVSLKNPVKL 346
>gi|395146553|gb|AFN53706.1| putative dead box ATP-dependent RNA helicase [Linum usitatissimum]
Length = 1272
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR---AVIVCPTRELAKQTYNETVRLS 105
G+ + A A TGSGKTA+FL+PII +NL + +++ PTREL Q ++ L
Sbjct: 461 GKSLLASAETGSGKTASFLVPIITCCSRHQNLNRKKPLGIVLTPTRELCIQVEDQAKLLG 520
Query: 106 EGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+GL + A V+G A + R Q ++++ TP +L+ LL + L V+ +V
Sbjct: 521 KGLLFKTALVVGGDAMAGQVH--RLQQGVELIVATPGRLIDLLTKHD--IELDEVKMFVV 576
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE D + ++ GFRDQ+ I+ + + P + M+SAT +E+V K +K V I++G
Sbjct: 577 DEVDYMLQS---GFRDQVMQIFVSLAQPQVL--MYSATISEEVEKLASSMIKEIVSISIG 631
Query: 225 LR 226
LR
Sbjct: 632 LR 633
>gi|220918247|ref|YP_002493551.1| DEAD/DEAH box helicase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956101|gb|ACL66485.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 488
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 113/222 (50%), Gaps = 27/222 (12%)
Query: 18 ISIIVTTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIPIIHSLR 75
+++ TL + + F+H P + P GR + A TG+GKTAAFL+PII L
Sbjct: 20 LNLSEKTLQALERAGFEHPTP-IQAQAIPPALGGRDVIGAAATGTGKTAAFLLPIIERLG 78
Query: 76 G----PKNL--------GFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAA 122
G PK+ G RA+++ PTRELA Q E R G +R A VIG + A
Sbjct: 79 GGAPAPKDRPAAAHGKPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGGVGMGA 138
Query: 123 EKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQL 182
+ R +V++ TP +LV LQ L +E L++DE+D++ + GF QL
Sbjct: 139 QSAALRD---HEVIVATPGRLVDHLQQG--TARLDGLEVLVLDEADRMLDM---GFAPQL 190
Query: 183 AVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
I A P +++ +FSAT +VA++ R L+ V++ V
Sbjct: 191 KRILARV--PKVRQTLLFSATMAGEVAEFARAHLRDPVRVEV 230
>gi|281209095|gb|EFA83270.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1070
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 8/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF++P+I L +G RA+I+ PTRELA QTY + G
Sbjct: 294 GSDVVAMARTGSGKTAAFVVPMIQKLGEHSIKVGARAIILSPTRELAIQTYKVVKDFTYG 353
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR+ ++ ++F A+ D+++ TP +LV+ LQ + L+ V++++ DE+
Sbjct: 354 SNLRSCLVVGGDSMEDQFA-ELARNPDIIVATPGRLVHHLQ--EVGMGLSTVQYIVFDEA 410
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF+ QL I + S N + +FSAT
Sbjct: 411 DRLFEM---GFQQQLNDIVSKLSD-NRQTLLFSAT 441
>gi|449268056|gb|EMC78927.1| ATP-dependent RNA helicase DDX54, partial [Columba livia]
Length = 797
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 11/156 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTA FLIP+ L+ P G RA+++ PTRELA QT T L +
Sbjct: 59 GRDVVAMARTGSGKTACFLIPMFERLKAPSQAGARALVLSPTRELALQTLKFTKELGKFT 118
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
GL+ +I + ++F + D++I TP +LV++ ++M L L VE+++ DE+
Sbjct: 119 GLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEM---KLKLHTVEYVVFDEA 174
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL I A P+ + +FSAT
Sbjct: 175 DRLFEM---GFAEQLQEIIARL--PDCHQTVLFSAT 205
>gi|388854481|emb|CCF51868.1| related to DRS1-RNA helicase of the DEAD box family [Ustilago
hordei]
Length = 935
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 101/186 (54%), Gaps = 21/186 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
G+ I A A TGSGKTAAF+IP I L R P R +I+ PTRELA Q Y+
Sbjct: 363 GKDIVAGAVTGSGKTAAFMIPTIERLTWRAKSRTPLQAKSRVLILAPTRELAIQCYSVGK 422
Query: 103 RLSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+++ +R +G K Q+A K P +V+I TP +L+ ++ + + L
Sbjct: 423 NIAKFTDIRFCLCVGGLSVKSQEAELKLRP------EVVIATPGRLIDHVR-NSASFTLD 475
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
++E L++DE+D++ + GF D+L I +C + +FSAT T+DV + R LKR
Sbjct: 476 DIEILVMDEADRMLQ---DGFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKR 532
Query: 218 RVQINV 223
V++ V
Sbjct: 533 PVRLFV 538
>gi|401626375|gb|EJS44323.1| dbp10p [Saccharomyces arboricola H-6]
Length = 1001
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P++ L+G +G RAVI+ P+RELA QT+N ++G
Sbjct: 181 RDIVGMARTGSGKTAAFILPMVEKLKGHSGKIGARAVILSPSRELAMQTFNVFKDFAKGT 240
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+F + DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 241 ELRSVLLTGGDSLEEQFSMMMSNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 296
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + A+ P ++ +FSAT
Sbjct: 297 DRLFEM---GFQEQLNELLASL--PTTRQTLLFSAT 327
>gi|389742318|gb|EIM83505.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 584
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 13/184 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG-------FRAVIVCPTRELAKQTYNETV 102
R + A +PTG+GKT ++L+P++ L P + RAVI+ PTRELA Q +NE +
Sbjct: 177 RDLAAISPTGTGKTLSYLLPLMSQLGSPSSSSSSEAGSGVRAVILAPTRELAHQIHNECL 236
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+L++ R + K AA K DV+I+TP +LV LQ L L NV L
Sbjct: 237 KLAQKRKWRIVLFSKA-TAATLADKNVRSKVDVIISTPLRLVTSLQSG--DLELNNVRHL 293
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ +A F DQ+ + AAC+ P +++ +FSAT K L +++
Sbjct: 294 VLDEADRMLDA---EFLDQVQEVIAACTHPKIQKAVFSATLPASAEKVAMGMLNDPIRVV 350
Query: 223 VGLR 226
VGL+
Sbjct: 351 VGLK 354
>gi|323338349|gb|EGA79576.1| Dbp10p [Saccharomyces cerevisiae Vin13]
Length = 581
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 78 SRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARG 137
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE
Sbjct: 138 TELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDE 193
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + A+ P ++ +FSAT
Sbjct: 194 ADRLFEM---GFQEQLNELLASL--PTTRQTLLFSAT 225
>gi|71999644|ref|NP_741348.2| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
gi|351051383|emb|CCD74205.1| Protein Y94H6A.5, isoform a [Caenorhabditis elegans]
Length = 825
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF+IP++ L+ G RA++V PTRELA QT+ L
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR + Q E+F + D+L+ TP +L++ +++MD L L+ V++++ DE+
Sbjct: 121 GLRCACLVGGDQIEEQFST-IHENPDILLATPGRLLHVIVEMD---LRLSYVQYVVFDEA 176
Query: 168 DKLFEAGVRGFRDQL 182
D+LFE GF+DQL
Sbjct: 177 DRLFEM---GFQDQL 188
>gi|326433021|gb|EGD78591.1| hypothetical protein PTSG_09283 [Salpingoeca sp. ATCC 50818]
Length = 448
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 24/190 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+G+ + ACA TGSGKT AFLIP + S + P R +++ PTRELAKQ + +LS
Sbjct: 213 MGKDMCACAATGSGKTLAFLIPALDRLSYKPPGPSVTRVLVLAPTRELAKQVHENAWKLS 272
Query: 106 -------EGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+GL + +I K+Q P + DV++ TP +LV ++ + P +
Sbjct: 273 AMFQSSKKGLNISCALIMGGNKLQADL----PIIKARPDVIVATPGRLVDHIE-NTPGFD 327
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
L+ VE LI+DE+D+L E GF D L I +C P+ + +FSAT T A K
Sbjct: 328 LSTVEILILDEADRLLEL---GFEDHLKSIVKSCK-PDRQTMLFSATMT---ASKPLSKA 380
Query: 216 KRRVQINVGL 225
KRR+++ L
Sbjct: 381 KRRMEMGFDL 390
>gi|255728265|ref|XP_002549058.1| hypothetical protein CTRG_03355 [Candida tropicalis MYA-3404]
gi|240133374|gb|EER32930.1| hypothetical protein CTRG_03355 [Candida tropicalis MYA-3404]
Length = 531
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 102/178 (57%), Gaps = 9/178 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ + A TGSGKT AF +P I+S+ KN + + PTRELA Q Y+ + L+
Sbjct: 158 KDVIGVAETGSGKTFAFGVPAINSIITTKNKNLSVLCISPTRELALQIYDNLIELTNDTN 217
Query: 110 LR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ V G + + + ++A +V++ TP +LV L+ + A+NL+N+++L++DE+D
Sbjct: 218 VKCVAVYGGVSKDEQIQKIKTA---NVVVATPGRLVDLI--NDGAINLSNIDYLVLDEAD 272
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
++ E +GF + + I ++ + + + MF+AT ++V + +K +++ VG R
Sbjct: 273 RMLE---KGFEEDIKRIISSTNAEDRQTLMFTATWPKEVRELANNFMKSPIKVTVGDR 327
>gi|380006435|gb|AFD29608.1| VASA-1 [Schmidtea mediterranea]
Length = 923
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 64/188 (34%), Positives = 107/188 (56%), Gaps = 17/188 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-----RGPKN-LGF-RAVIVCPTRELAKQTYNETV 102
R + ACA TGSGKTAAFLIPII SL P + + F +A+I+ PTREL +Q +
Sbjct: 521 RDLMACAQTGSGKTAAFLIPIIKSLSENGTESPASAVAFPKALIMAPTRELCRQIFTAAR 580
Query: 103 RLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L G ++ A++ G I+ + + A D+L+ TP +L++ L++ L+L +++
Sbjct: 581 HLCRGSNIKCAYIYGGIEMNKSRRNIQ-ATGCDILVATPGRLIHFLEL--VWLSLRYLQF 637
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIY--AACSGPN--LKRGMFSATHTEDVAKWCRRKLKR 217
++DE+D++ ++ GF + + IY A SG + ++ MFSAT ++ R LK
Sbjct: 638 FVLDEADRMLDSD--GFYESVTKIYNEANFSGDDRSIQISMFSATFPNEIQTLARNLLKN 695
Query: 218 RVQINVGL 225
+ + VG+
Sbjct: 696 YLFLAVGV 703
>gi|326432491|gb|EGD78061.1| hypothetical protein PTSG_08940 [Salpingoeca sp. ATCC 50818]
Length = 478
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + APTGSGKT AF P++ +L + G RAV+V PT ELA Q +E LS G
Sbjct: 192 RDVVGIAPTGSGKTCAFSFPLLANLGKHDDSGIRAVVVAPTPELAFQIKSELELLSRGSK 251
Query: 110 LRAHV-----IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L + +G + +A ++ D+L++TP +LVY L ++LA V W+++
Sbjct: 252 LSIQLLTKANVGNVAKARQR-------SHDILVSTPRRLVYCLSKG--LIDLAKVSWVVI 302
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D LFE G+ QL I AC+ +FSAT
Sbjct: 303 DEADTLFE---NGYETQLDEILHACAN-REHVSLFSAT 336
>gi|261335430|emb|CBH18424.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 556
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 15/165 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + ACAPTGSGKT AFLIP+ L P ++ G RA+I+ PT ELA+Q E L +
Sbjct: 168 GRDVLACAPTGSGKTVAFLIPMFARLGKPDRDAGVRALIITPTMELAEQIEREAFFLLK- 226
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G R ++ Q K D+ ITTP ++ LL+ ++L+N+++L+ DE
Sbjct: 227 -GKRWKLVQHGQTTRNK---------DIFITTPGRVSTLLERK--LVDLSNIQYLVFDEG 274
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
D+L+++ R + ++ AC+ +F+AT +E + R
Sbjct: 275 DRLWDSSTDNLR-VMDIVLTACTYKEKVVALFTATLSEKIEAAAR 318
>gi|74025742|ref|XP_829437.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834823|gb|EAN80325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 556
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 15/165 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + ACAPTGSGKT AFLIP+ L P ++ G RA+I+ PT ELA+Q E L +
Sbjct: 168 GRDVLACAPTGSGKTVAFLIPMFARLGKPDRDAGVRALIITPTMELAEQIEREAFFLLK- 226
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G R ++ Q K D+ ITTP ++ LL+ ++L+N+++L+ DE
Sbjct: 227 -GKRWKLVQHGQTTRNK---------DIFITTPGRVSTLLERK--LVDLSNIQYLVFDEG 274
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
D+L+++ R + ++ AC+ +F+AT +E + R
Sbjct: 275 DRLWDSSTDNLR-VMDIVLTACTYKEKVVALFTATLSEKIEAAAR 318
>gi|410077537|ref|XP_003956350.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
gi|372462934|emb|CCF57215.1| hypothetical protein KAFR_0C02220 [Kazachstania africana CBS 2517]
Length = 511
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 103/182 (56%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P IHSL N +++ PTRELA Q Y+ + L++
Sbjct: 135 GKDVIGVAETGSGKTFAFGVPAIHSLVSSSNKKDISVLVISPTRELASQIYDNLIILTDK 194
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+GL I G + + ++ R +Q V++ TP +L+ L+Q ++NL+ V++L++DE
Sbjct: 195 VGLECCCIYGGVPKDEQRKQLRRSQ---VVVATPGRLLDLIQ--EGSVNLSKVQYLVLDE 249
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I +G R MF+AT ++V + ++ V++++G
Sbjct: 250 ADRMLE---KGFEEDIKNIIKETNGNRANRQTLMFTATWPKEVRELASTFMRDPVKVSIG 306
Query: 225 LR 226
R
Sbjct: 307 NR 308
>gi|340377875|ref|XP_003387454.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Amphimedon queenslandica]
Length = 1183
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 10/140 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TGSGKTAAFLIP+ L+ P+ G R +I+ PTRELA QT T L
Sbjct: 87 GKDVVAMARTGSGKTAAFLIPLFERLKSHSPQVSGVRGLILSPTRELALQTMKFTKELGR 146
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVD 165
GLRA VI + ++F + D++I TP + ++ LL+MD + L +VE+++ D
Sbjct: 147 FTGLRAAVILGGDRIEDQFSTIH-ENPDIIIATPGRFLHLLLEMD---MKLLHVEYVVFD 202
Query: 166 ESDKLFEAGVRGFRDQLAVI 185
E+D+LFE GF +QL I
Sbjct: 203 EADRLFEM---GFSEQLHEI 219
>gi|294899003|ref|XP_002776456.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239883447|gb|EER08272.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 977
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I L+G +G RAVI+ PTRELA QT T L +
Sbjct: 67 GSDVVAMARTGSGKTAAFVIPMIQILKGHSEVVGARAVILSPTRELAMQTIKVTRMLGKF 126
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR +I +F R + DVLI TP +LV+ M L+L V++++ DE+
Sbjct: 127 TDLRLCLIVGGHSMESQFD-RLSSNPDVLICTPGRLVH--HMVEADLSLQRVQYIVFDEA 183
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF D + I A P+ + +FSAT + ++ R L+
Sbjct: 184 DRLFEM---GFADDMQSILKATP-PSRQCLLFSATLPSQLTQFSRAGLR 228
>gi|402221947|gb|EJU02015.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 809
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 14/185 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IPI+ L RG R VI+CPTRELA Q + R
Sbjct: 255 LGKDVVGGAVTGSGKTAAFVIPILERLLFRDRGKAAATTRVVILCPTRELAVQCHAVATR 314
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ +R + V+G + ++ R+ + DV+I TP +L+ L+ + P+ +L ++ L
Sbjct: 315 IGSFTDVRFSLVVGGLSLKGQEAELRT--RPDVVIATPGRLIDHLR-NSPSFSLDMLDVL 371
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
I+DE+D++ E GF +L I +AC P ++ M FSAT T+ V + R L + V++
Sbjct: 372 IMDEADRMLE---EGFAAELGEIISAC--PKQRQTMLFSATMTDSVDELIRMGLNKPVRL 426
Query: 222 NVGLR 226
V R
Sbjct: 427 FVDPR 431
>gi|422616661|ref|ZP_16685366.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
gi|330896875|gb|EGH28465.1| helicase [Pseudomonas syringae pv. japonica str. M301072]
Length = 445
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGGCAGRE-QTMLFSAT 185
>gi|170083961|ref|XP_001873204.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650756|gb|EDR14996.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 355
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 14/185 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L +G K R +++ PTRELA Q ++ V+
Sbjct: 32 LGKDVVGNAMTGSGKTAAFIIPMVERLLYREKGKKAAATRCLVLVPTRELAVQCFDVGVK 91
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
LS ++ ++G + +++ R+ + D++I TP +L+ ++ + PA L ++ L
Sbjct: 92 LSTHTDIQLCLLVGGLSLKSQEVALRA--RPDIVIATPGRLIDHIR-NSPAFTLDAIDIL 148
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+LA I +C P ++ M FSAT T+ V + + L + V++
Sbjct: 149 VLDEADRMLSD---GFADELAEIIKSC--PVSRQTMLFSATMTDSVDELVKMSLNKPVRL 203
Query: 222 NVGLR 226
V R
Sbjct: 204 FVDPR 208
>gi|403415272|emb|CCM01972.1| predicted protein [Fibroporia radiculosa]
Length = 782
Score = 90.9 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 22/186 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ I A TGSGKTAAF+IP++ L RG K R +++ PTREL Q + +
Sbjct: 229 LGKDIVGNAVTGSGKTAAFIIPMLERLLYRDRGKKAAATRCLVLVPTRELGVQCFEVGTK 288
Query: 104 LSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +R + V+G K Q+A + P DV+I TP +L+ L+ + PA L
Sbjct: 289 LAAHTDIRFSLVVGGLSVKTQEATLRTRP------DVVIATPGRLIDHLR-NSPAFTLDA 341
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ L++DE+D++ GF D+L I +C P ++ M FSAT T+ V + R L +
Sbjct: 342 LDILVLDEADRMLS---DGFADELTEIIKSC--PMSRQTMLFSATMTDSVDELVRMSLDK 396
Query: 218 RVQINV 223
V++ V
Sbjct: 397 PVRLFV 402
>gi|50291719|ref|XP_448292.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690788|sp|Q6FNA2.1|DBP10_CANGA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49527604|emb|CAG61253.1| unnamed protein product [Candida glabrata]
Length = 969
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RA+I+ P+RELA QT++ S G
Sbjct: 153 RDIVGMARTGSGKTAAFVLPMIEKLKTHSSKIGARAIILSPSRELAMQTHSVFKEFSRGT 212
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++FG DV+I TP + ++L ++M+ L+L +VE+ + DE+
Sbjct: 213 HLRSVLLTGGDSLEDQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYAVFDEA 268
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + AA P+ ++ +FSAT
Sbjct: 269 DRLFEM---GFQEQLNELLAAL--PSSRQTLLFSAT 299
>gi|66800711|ref|XP_629281.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
gi|74996456|sp|Q54CD8.1|DDX54_DICDI RecName: Full=ATP-dependent RNA helicase ddx54; AltName:
Full=ATP-dependent RNA helicase helA; AltName: Full=DEAD
box protein 54
gi|60462646|gb|EAL60848.1| hypothetical protein DDB_G0292992 [Dictyostelium discoideum AX4]
Length = 1091
Score = 90.9 bits (224), Expect = 4e-16, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G I A TGSGKT AF+IP+I L +G RAVI+ PTRELA QT+ S+G
Sbjct: 267 GHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQG 326
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVDE 166
LR +I ++F A+ D++I TP +L+ +LL+ ++L+ V++++ DE
Sbjct: 327 TQLRTILIVGGDSMEDQF-TDLARNPDIIIATPGRLMHHLLET---GMSLSKVQYIVFDE 382
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE GF +QL I + S N + +FSAT + + R L IN+
Sbjct: 383 ADRLFEM---GFNEQLTEILSKLS-ENRQTLLFSATLPSLLVDFVRAGLNNPKLINL 435
>gi|27545287|ref|NP_775375.1| ATP-dependent RNA helicase DDX54 [Danio rerio]
gi|20977591|gb|AAM28223.1| ATP-dependent RNA helicase [Danio rerio]
Length = 862
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFL+P+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 115 GKDVVAMARTGSGKTAAFLVPLFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKF 174
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GLR +I ++F + D++I TP +L++++Q L L +VE+++ DE+
Sbjct: 175 TGLRTALILGGDSMDDQFAALH-ENPDIIIGTPGRLMHVIQ--EMNLKLQSVEYVVFDEA 231
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCR 212
D+LFE GF +QL I P+ ++ +FSAT + + ++ R
Sbjct: 232 DRLFEM---GFAEQLQEIIRRL--PDARQTLLFSATLPKLIVEFAR 272
>gi|320581590|gb|EFW95810.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Ogataea parapolymorpha DL-1]
Length = 1254
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAFL+P+I L+ +G RA+++ P+RELA QT + S G
Sbjct: 124 NRDVVGMARTGSGKTAAFLLPLIEKLKTHVAKIGVRAIVLSPSRELAMQTSKQFKEFSRG 183
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIV 164
LR+ ++ ++FG A DV+I TP + ++L +Q+D L VE+++
Sbjct: 184 SDLRSLLLIGGDSMEDQFGAMMANP-DVIIATPGRFLHLKTEMQLD-----LRTVEYIVY 237
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
DE+D+LFE GF +QL + AA P ++ M FSAT
Sbjct: 238 DEADRLFEM---GFAEQLNELLAAL--PEKRQSMLFSAT 271
>gi|28868793|ref|NP_791412.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969602|ref|ZP_03397738.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
gi|28852032|gb|AAO55107.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925698|gb|EEB59257.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
T1]
Length = 453
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 19/161 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E R S+
Sbjct: 45 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQ 104
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L L Q++ L+L +VE
Sbjct: 105 FTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLKHVEV 156
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 157 LVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 193
>gi|301111750|ref|XP_002904954.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095284|gb|EEY53336.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 847
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ A A TGSGKTAAFL+P++ L+ +G RAV++ PTRELA QT +LS+
Sbjct: 73 GKDCVAMARTGSGKTAAFLVPMVEKLKEHSTKIGVRAVVLSPTRELAVQTLRFAKQLSKF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L+ +I + ++F A DVL+ TP +L++LLQ + P NL VE+++ DE+
Sbjct: 133 TSLKMALIVGGEGMDQQF-EAIASNPDVLVATPGRLMHLLQ-EIPDFNLKAVEYVVFDEA 190
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCR 212
D++FE GF +QL I P ++ +FSAT + + ++ R
Sbjct: 191 DRIFEM---GFAEQLQEILKNM--PTSRQTLLFSATLPKALVQFAR 231
>gi|365766492|gb|EHN07988.1| Dbp10p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 899
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 78 SRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARG 137
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE
Sbjct: 138 TELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDE 193
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + A+ P ++ +FSAT
Sbjct: 194 ADRLFEM---GFQEQLNELLASL--PTTRQTLLFSAT 225
>gi|422667305|ref|ZP_16727169.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330977878|gb|EGH77781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|416015105|ref|ZP_11562765.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|416028719|ref|ZP_11571636.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422404416|ref|ZP_16481469.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320325391|gb|EFW81456.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327468|gb|EFW83481.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330877269|gb|EGH11418.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 19/161 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L L Q++ L+L +VE
Sbjct: 97 FTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLKHVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 149 LVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|440741996|ref|ZP_20921326.1| helicase [Pseudomonas syringae BRIP39023]
gi|440378082|gb|ELQ14712.1| helicase [Pseudomonas syringae BRIP39023]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|302188635|ref|ZP_07265308.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
642]
gi|443642767|ref|ZP_21126617.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
gi|443282784|gb|ELS41789.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. syringae
B64]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|237798870|ref|ZP_04587331.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021724|gb|EGI01781.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|66047019|ref|YP_236860.1| helicase [Pseudomonas syringae pv. syringae B728a]
gi|422673345|ref|ZP_16732705.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|424068921|ref|ZP_17806369.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440722920|ref|ZP_20903290.1| helicase [Pseudomonas syringae BRIP34876]
gi|440727353|ref|ZP_20907589.1| helicase [Pseudomonas syringae BRIP34881]
gi|63257726|gb|AAY38822.1| Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Pseudomonas syringae pv. syringae B728a]
gi|330971079|gb|EGH71145.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aceris
str. M302273]
gi|407996030|gb|EKG36527.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|440360496|gb|ELP97768.1| helicase [Pseudomonas syringae BRIP34876]
gi|440364118|gb|ELQ01258.1| helicase [Pseudomonas syringae BRIP34881]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|301384847|ref|ZP_07233265.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
Max13]
gi|302059212|ref|ZP_07250753.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
K40]
gi|302130851|ref|ZP_07256841.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|422297602|ref|ZP_16385235.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
gi|422658705|ref|ZP_16721137.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331017330|gb|EGH97386.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|407990944|gb|EKG32917.1| ATP-dependent RNA helicase SrmB [Pseudomonas avellanae BPIC 631]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|71736956|ref|YP_273717.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|289647906|ref|ZP_06479249.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422584568|ref|ZP_16659674.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|422598398|ref|ZP_16672660.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422680932|ref|ZP_16739203.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|71557509|gb|AAZ36720.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157456|gb|EFH98539.1| ATP-dependent RNA helicase SrmB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330869381|gb|EGH04090.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330988677|gb|EGH86780.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010277|gb|EGH90333.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 445
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|207346902|gb|EDZ73254.1| YDL031Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 846
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 25 SRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARG 84
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE
Sbjct: 85 TELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDE 140
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + A+ P ++ +FSAT
Sbjct: 141 ADRLFEM---GFQEQLNELLASL--PTTRQTLLFSAT 172
>gi|134055621|emb|CAK37267.1| unnamed protein product [Aspergillus niger]
Length = 697
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 51 QIFACAPTGSGKTAAFLIPII-----HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+ APTGSGKT +F+IP+I H P+ G +V++ PT+ELA Q NE +L+
Sbjct: 236 DLLVVAPTGSGKTLSFMIPVINKIVRHHHEKPEERGILSVVIAPTKELASQIVNEGRKLA 295
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMD--PPALNLANVEWLI 163
G G++ ++ K K G K D+L+TTP LV L + P L V ++
Sbjct: 296 LGTGVKITLMKKGMPKNSK-GKAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVV 354
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
+DE+D L + FRDQ I+ +C+ P L+ ++SAT +V + +K R
Sbjct: 355 LDEADVLLDP---LFRDQTLDIWRSCTHPELRASLWSATMGSNVEDLAKSTIKER 406
>gi|294900795|ref|XP_002777119.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
gi|239884576|gb|EER08935.1| ATP-dependent RNA helicase dbp-10, putative [Perkinsus marinus ATCC
50983]
Length = 967
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 8/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I L+G +G RAVI+ PTRELA QT T L +
Sbjct: 68 GSDVVAMARTGSGKTAAFVIPMIQILKGHSEVVGARAVILSPTRELAMQTIKVTRMLGKF 127
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR +I +F R + DVLI TP +LV+ M L+L V++++ DE+
Sbjct: 128 TDLRLCLIVGGHSMESQF-DRLSSNPDVLICTPGRLVH--HMVEADLSLQRVQYIVFDEA 184
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF D + I A P+ + +FSAT + ++ R L+
Sbjct: 185 DRLFEM---GFADDMQSILKATP-PSRQCLLFSATLPSQLTQFSRAGLR 229
>gi|424073352|ref|ZP_17810770.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407996213|gb|EKG36696.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 445
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 22/180 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDMRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 132 L--LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|289628314|ref|ZP_06461268.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
Length = 413
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 96/165 (58%), Gaps = 19/165 (11%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETV 102
L+ GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E
Sbjct: 1 LALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVE 60
Query: 103 RLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
R S+ ++A +I K+Q A + P D+LI TP +L L Q++ L+L
Sbjct: 61 RFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLK 112
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 113 HVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 153
>gi|410093986|ref|ZP_11290448.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
gi|409758627|gb|EKN43906.1| ATP-dependent RNA helicase SrmB [Pseudomonas viridiflava UASWS0038]
Length = 445
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 99/178 (55%), Gaps = 18/178 (10%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSA---QKFDVLITTPNKLV 144
PTRELA+QT E R S+ ++A ++ E F ++A + D+LI TP +L
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFVKAGLV----TGGEDFKAQAAMLRKVPDILIGTPGRL- 132
Query: 145 YLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L Q++ L+L +VE L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 133 -LEQLNAGNLDLKHVEVLVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 185
>gi|257486807|ref|ZP_05640848.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
Length = 410
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 94/161 (58%), Gaps = 19/161 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E R S+
Sbjct: 2 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQ 61
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L L Q++ L+L +VE
Sbjct: 62 FTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLKHVEV 113
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D++ + GF + + + C+G + +FSAT
Sbjct: 114 LVLDEADRMLDM---GFSEDVERLAGECAGRE-QTMLFSAT 150
>gi|86159377|ref|YP_466162.1| DEAD/DEAH box helicase-like protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775888|gb|ABC82725.1| DEAD/DEAH box helicase-like protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 487
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 23/219 (10%)
Query: 18 ISIIVTTLAVVSNSIFKHFEPHFTITYLSPL-GRQIFACAPTGSGKTAAFLIPIIHSLRG 76
+++ TL + + F+H P T L GR + A TG+GKTAAFL+PII L G
Sbjct: 20 LNLSEKTLHALERAGFEHPTPIQTQAIPPALAGRDVIGAAATGTGKTAAFLLPIIERLSG 79
Query: 77 PKNL----------GFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAAEKF 125
G RA+++ PTRELA Q E R G +R A VIG + A+
Sbjct: 80 AATKDRPAAAHARPGPRALVLAPTRELAVQIAGELDRFGRGRHVRGALVIGGVGMGAQSA 139
Query: 126 GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVI 185
R +V++ TP +LV LQ L +E L++DE+D++ + GF QL I
Sbjct: 140 ALRD---HEVIVATPGRLVDHLQQG--TARLDGLEVLVLDEADRMLDM---GFAPQLKRI 191
Query: 186 YAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
A P +++ +FSAT +VA + R L+ V++ V
Sbjct: 192 LARV--PKVRQTLLFSATMAGEVADFARAHLRDPVRVEV 228
>gi|67479813|ref|XP_655288.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56472415|gb|EAL49901.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449703391|gb|EMD43850.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba
histolytica KU27]
Length = 684
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 13/172 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQT---YNETVRLS 105
G I A A TGSGKTAA+L+PII+ L G R++I+CPTRELA QT +NE +L+
Sbjct: 50 GNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLT 109
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
L+A +I + +++F S+ D+++ TP +L ++L+ +LN VE + D
Sbjct: 110 ---NLKASLIIGGSKLSDQFDNLSSGP-DIIVATPGRLTFILEGANISLN--RVEMVCFD 163
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
E+D +FE+ GF +Q++ I P + +FSAT ++A++ + LK+
Sbjct: 164 EADLMFES---GFSEQVSDIMRMLP-PTRQILLFSATLPRNLAEFLKNTLKQ 211
>gi|167382487|ref|XP_001736127.1| DEAD box ATP-dependent RNA helicase [Entamoeba dispar SAW760]
gi|165901566|gb|EDR27644.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba dispar
SAW760]
Length = 684
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 13/172 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQT---YNETVRLS 105
G I A A TGSGKTAA+L+PII+ L G R++I+CPTRELA QT +NE +L+
Sbjct: 50 GNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLT 109
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
L+A +I + +++F S+ D+++ TP +L ++L+ +LN VE + D
Sbjct: 110 ---NLKASLIIGGSKLSDQFDNLSSGP-DIIVATPGRLTFILEGANISLN--RVEMVCFD 163
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
E+D +FE+ GF +Q++ I P + +FSAT ++A++ + LK+
Sbjct: 164 EADLMFES---GFSEQVSDIMRMLP-PTRQILLFSATLPRNLAEFLKNTLKQ 211
>gi|157873736|ref|XP_001685372.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68128444|emb|CAJ08547.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 580
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 90/164 (54%), Gaps = 15/164 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL+P+ L+ P + G RA+IV PT ELA+Q E L +G
Sbjct: 179 RDVLACAPTGSGKTIAFLVPLFALLKAPDASCGVRALIVTPTAELAQQIEREAFFLMKGQ 238
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ G+ + +K D+ I TP +++ LL+ L+L+NV++L+ DE D
Sbjct: 239 RWKFVQHGQ-----------TTKKKDIFIATPGRILSLLEQ--KLLDLSNVQYLVFDEGD 285
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+L+++ F + I AC+ + +F+AT +E V R
Sbjct: 286 RLWDSRT-DFLTVIDRILTACTRTDKVVSLFTATLSEKVEAAAR 328
>gi|407043198|gb|EKE41803.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 684
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 102/172 (59%), Gaps = 13/172 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQT---YNETVRLS 105
G I A A TGSGKTAA+L+PII+ L G R++I+CPTRELA QT +NE +L+
Sbjct: 50 GNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKVFNELGKLT 109
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
L+A +I + +++F S+ D+++ TP +L ++L+ +LN VE + D
Sbjct: 110 ---NLKASLIIGGSKLSDQFDNLSSGP-DIIVATPGRLTFILEGANISLN--RVEMVCFD 163
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
E+D +FE+ GF +Q++ I P + +FSAT ++A++ + LK+
Sbjct: 164 EADLMFES---GFSEQVSDIMRMLP-PTRQILLFSATLPRNLAEFLKNTLKQ 211
>gi|300088260|ref|YP_003758782.1| DEAD/DEAH box helicase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527993|gb|ADJ26461.1| DEAD/DEAH box helicase domain protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 429
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TG+GKT AF++P++ LRGP+ R +IV PTRELA+Q Y+ LS+
Sbjct: 38 GRDLIGLAQTGTGKTTAFVLPMLQRLLRGPRG-KLRGLIVSPTRELAEQIYDSVKTLSQH 96
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVD 165
GLRA I G + +K R+ D++I P +L+ ++ Q ++ +VE L++D
Sbjct: 97 TGLRAMAIYGGVGMEPQKAKLRAGT--DIVIACPGRLLDHVWQG---TIDFDDVEMLVID 151
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D++F+ GF + I P + +FSAT DV K + L V + +G
Sbjct: 152 EADRMFDM---GFLPDIRKILRCLVRPERQTLLFSATMPADVRKLVQEFLTDPVTVQIG 207
>gi|223590189|sp|A5DLR3.2|DBP10_PICGU RecName: Full=ATP-dependent RNA helicase DBP10
gi|190347777|gb|EDK40116.2| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
R + A TGSGKTAAF++P++ L+ PK +G RAVI+ P+RELA QT+ + ++
Sbjct: 136 SRDVVGMARTGSGKTAAFVLPVVEKLKSHSPK-VGVRAVILSPSRELALQTFKQVKEFTK 194
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVD 165
G LR+ V+ ++F D+L+ TP + ++L ++M+ L+L VE+++ D
Sbjct: 195 GTDLRSIVLIGGDSLEDQFSSMMTNP-DILVATPGRFLHLKVEMN---LDLKTVEYIVFD 250
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE GF +QL + A P+ + +FSAT
Sbjct: 251 EADRLFEM---GFAEQLNELLVALP-PSRQSLLFSAT 283
>gi|344301065|gb|EGW31377.1| ATP-dependent RNA helicase DBP10 [Spathaspora passalidarum NRRL
Y-27907]
Length = 918
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF++P+I L+ G RA+I+ P+RELA QTY + G
Sbjct: 139 NRDVVGMARTGSGKTAAFVLPLIEKLKVRSASGVRAIILSPSRELALQTYKQVKEFGHGT 198
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ V+ E F + K D+++ TP + ++L ++MD +L+ +++++ DE+
Sbjct: 199 NLQTTVLIGGDTLEEDFS-KMVSKPDIIVCTPGRFLHLKVEMD---YDLSTIQYIVFDEA 254
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF QL + A+ PN + +FSAT
Sbjct: 255 DRLFEM---GFAIQLNELLASLP-PNRQSLLFSAT 285
>gi|1279685|emb|CAA96458.1| unknown [Saccharomyces cerevisiae]
gi|1431010|emb|CAA98590.1| DBP10 [Saccharomyces cerevisiae]
Length = 995
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 174 SRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARG 233
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE
Sbjct: 234 TELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDE 289
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + A+ P ++ +FSAT
Sbjct: 290 ADRLFEM---GFQEQLNELLASL--PTTRQTLLFSAT 321
>gi|390333392|ref|XP_783077.3| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Strongylocentrotus purpuratus]
Length = 734
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L PK R ++V PTREL Q +N + +L
Sbjct: 189 LGKDICACAATGTGKTAAFMLPVVERLLYKPKQAPVTRVLVVTPTRELGVQIFNVSRQLC 248
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
E + + +G K+Q+AA + GP D++I TP +L+ L + P +L++VE
Sbjct: 249 EFTNIECCLAVGGLDIKLQEAALRKGP------DIVIATPGRLIDHLH-NAPTFSLSSVE 301
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + +FSAT T+ V LK V+
Sbjct: 302 VLILDEADRMLD---EFFEEQMKEIIKMCSVAR-QTMLFSATMTDQVKDLALVSLKNPVR 357
Query: 221 INVG 224
I V
Sbjct: 358 IFVN 361
>gi|341892664|gb|EGT48599.1| hypothetical protein CAEBREN_09605 [Caenorhabditis brenneri]
Length = 813
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF+IP++ L+G G RA++V PTRELA QT+ L
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKGRDTKGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR + E+F + D+L+ TP +L++ +++MD L L+ V++++ DE+
Sbjct: 121 GLRCACLVGGDVLEEQFST-IHENPDILLATPGRLLHVIVEMD---LRLSFVQYVVFDEA 176
Query: 168 DKLFEAGVRGFRDQL 182
D+LFE GF+DQL
Sbjct: 177 DRLFEM---GFQDQL 188
>gi|256079059|ref|XP_002575808.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230863|emb|CCD77280.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 625
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 33/190 (17%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF-----RAVIVCPTRELAKQTYNET- 101
L R I ACA TGSGKT AFL+P++ L K+ F RA+++ PTRELA Q +N
Sbjct: 161 LHRDICACARTGSGKTLAFLLPVLERL-AKKSTDFNHAVTRALVISPTRELAVQIFNVAE 219
Query: 102 ----------VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
++L+ G GL H Q+A+ + P D+++ TP +L+ L +
Sbjct: 220 KLVKYCPKLRIQLAAG-GLDLHS----QEASLRLNP------DLVVATPGRLIDHLS-NA 267
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
P+ NL ++E+L++DE+DKL + F +Q+ I CS + +FSAT TE V +
Sbjct: 268 PSFNLQHIEYLVLDEADKLLD---EYFAEQIGEIIKFCSTKR-QTLLFSATMTESVKELA 323
Query: 212 RRKLKRRVQI 221
L+ VQ+
Sbjct: 324 ILSLRDPVQV 333
>gi|322700977|gb|EFY92729.1| ATP-dependent RNA helicase dbp10 [Metarhizium acridum CQMa 102]
Length = 894
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKT AF+IP+I LR G RA+I+ P+RELA QT + G
Sbjct: 121 KDVVGMARTGSGKTGAFVIPMIEKLRAHSGRFGSRALILSPSRELAIQTLKVVKEFARGT 180
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 181 DLKAVLLVGGDSLEEQFGYMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 236
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 237 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPASLVEFARAGLQ 281
>gi|330812848|ref|XP_003291329.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
gi|325078509|gb|EGC32157.1| hypothetical protein DICPUDRAFT_155915 [Dictyostelium purpureum]
Length = 1031
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/168 (35%), Positives = 95/168 (56%), Gaps = 8/168 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKT AF+IP++ L+ + G R+VI+ PTRELA QT+ ++G
Sbjct: 256 GNDVVGMARTGSGKTGAFVIPMVQMLQEHSTVVGVRSVILSPTRELAIQTFKVVKDFTQG 315
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR +I E++ A+ D++I TP +L++ LQ ++L+ V++++ DE+
Sbjct: 316 TNLRTILIVGGDSMEEQYDDL-ARNPDIIIATPGRLMHHLQ--ETGMSLSKVKYIVFDEA 372
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
D+LFE GF +QL I + S N + +FSAT + ++ R L
Sbjct: 373 DRLFEM---GFNEQLTEILSKLS-ENRQTLLFSATLPSLLVEFVRAGL 416
>gi|322706702|gb|EFY98282.1| ATP-dependent RNA helicase dbp10 [Metarhizium anisopliae ARSEF 23]
Length = 892
Score = 90.1 bits (222), Expect = 6e-16, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKT AF+IP+I LR G RA+I+ P+RELA QT + G
Sbjct: 121 KDVVGMARTGSGKTGAFVIPMIEKLRAHSGRFGSRALILSPSRELAIQTLKVVKEFARGT 180
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 181 DLKAILLVGGDSLEEQFGYMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 236
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 237 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPASLVEFARAGLQ 281
>gi|406861712|gb|EKD14765.1| putative ATP-dependent RNA helicase rok1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 712
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 109/225 (48%), Gaps = 43/225 (19%)
Query: 21 IVTTLAVVSNSIFKHFEPHFTITYLSPLGRQI--FACAPTGSGKTAAFLIPIIHSL---- 74
I T + + S I E + L +G ++ A APTGSGKT AFLIPI+ +
Sbjct: 177 IPTEVQMASLPILLRPEVALGDSELEQMGAEVDLLAVAPTGSGKTLAFLIPIVDRIIQRR 236
Query: 75 RGPKNL-----GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIG------------- 116
RG K G A++V PT+ELA Q NE +LS G G++ V+G
Sbjct: 237 RGQKEEDKATHGLDAIVVAPTKELASQIVNEAKKLSLGTGVK--VVGMKKGMRIVEGGGA 294
Query: 117 ---------KIQQAAEKFGPRSAQ---KFDVLITTPNKLVYLLQMDPPALN--LANVEWL 162
E G +++Q K D+LITTP ++ L P N L +V L
Sbjct: 295 QEHGNESSSDEDDVEEMDGKKTSQPIVKGDMLITTPGLILRALSTSEPGRNHSLPSVRAL 354
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
++DE+D L + FRDQ I+++C+ P+L+ ++SAT ++
Sbjct: 355 VLDEADVLLDP---LFRDQTLGIWSSCTNPSLRVTLWSATMGSNI 396
>gi|291239093|ref|XP_002739459.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Saccoglossus
kowalevskii]
Length = 851
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 94/156 (60%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A A TGSGKTAAFLIP+ L R G RA+I+ PTRELA QT T L + L
Sbjct: 116 KDVVAMARTGSGKTAAFLIPMFEKLQRHSAKTGARALILSPTRELAVQTLKFTRELGKFL 175
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR+ VI + ++F + D++I TP +L++ L++MD L L ++E+++ DE+
Sbjct: 176 GLRSAVILGGDKMDDQFAALH-ENPDIIIATPGRLLHVLVEMD---LKLNSLEYVVFDEA 231
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL I P+ ++ +FSAT
Sbjct: 232 DRLFEM---GFAEQLEEIIQRL--PDDRQTLLFSAT 262
>gi|237840157|ref|XP_002369376.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967040|gb|EEB02236.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|221483063|gb|EEE21387.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
gi|221503995|gb|EEE29672.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 652
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 103/176 (58%), Gaps = 9/176 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A APTGSGKT AFL+P++ L+ P R ++VCP+RELAKQT E L+
Sbjct: 259 GQHLLATAPTGSGKTFAFLLPLLALLKKPGKEFARLLVVCPSRELAKQTQREFDSLAGAR 318
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R ++ + +Q+ ++ + A++ D ++TTP +LV L+ ++LA +++DE+D
Sbjct: 319 GFRCRLLDEQKQSVDQAASQ-AKRVDAVVTTPLRLVQFLRDG--RVSLAQCRHIVLDEAD 375
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KL + G QL I A C+ P+L+ +FSAT DV + L V I++G
Sbjct: 376 KLLDLG------QLDEILAGCTFPSLQVSLFSATLPPDVLRLADSLLHNPVHISIG 425
>gi|71018173|ref|XP_759317.1| hypothetical protein UM03170.1 [Ustilago maydis 521]
gi|74701966|sp|Q4P9P3.1|DRS1_USTMA RecName: Full=ATP-dependent RNA helicase DRS1
gi|46099167|gb|EAK84400.1| hypothetical protein UM03170.1 [Ustilago maydis 521]
Length = 932
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 21/184 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
G+ I A A TGSGKTAAF+IP I L R P R +I+ PTRELA Q Y+
Sbjct: 370 GKDIVAGAVTGSGKTAAFMIPTIERLTWRAKTRTPHEAKSRVLILAPTRELAIQCYSVGK 429
Query: 103 RLSEGLGLR-----AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+++ +R + K Q+A K P +V+I TP +L+ ++ + + L
Sbjct: 430 SIAKFTDIRFCLCVGGLSVKSQEAELKLRP------EVVIATPGRLIDHVR-NSASFTLD 482
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
++E L++DE+D++ E GF D+L I +C + +FSAT T+DV + R LKR
Sbjct: 483 DIEILVMDEADRMLED---GFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKR 539
Query: 218 RVQI 221
V++
Sbjct: 540 PVRL 543
>gi|320593114|gb|EFX05523.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 956
Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I LR +G RA+++ P+RELA QT L +G
Sbjct: 147 RDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALVLSPSRELALQTLKVVKELGKGT 206
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG A D++I TP + ++L ++M +L+L++V +++ DE+
Sbjct: 207 DLKTILLVGGDSLEEQFG-LVASNPDIVIATPGRFLHLKVEM---SLDLSSVRYVVFDEA 262
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 263 DRLFEM---GFAAQLTEILHALP-PSRQTLLFSATLPSTLVEFARAGLQ 307
>gi|241953401|ref|XP_002419422.1| ATP-dependent RNA helicase, putative; ribosome biogenesis protein,
putative [Candida dubliniensis CD36]
gi|223642762|emb|CAX43016.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 933
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 89/157 (56%), Gaps = 13/157 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKTAAF++P+I L+ + G RAVI+ P+RELA QTY + S G
Sbjct: 144 GRDVVGMARTGSGKTAAFVLPLIERLKSRQLGGVRAVILSPSRELALQTYKQVKEFSHGT 203
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL---LQMDPPALNLANVEWLIVD 165
L++ V+ E F + K D+++ TP + ++L +Q D L +++++ D
Sbjct: 204 NLQSIVLIGGDSLEEDFS-KMMTKPDIIVCTPGRFLHLKVEMQYD-----LMTIQYIVFD 257
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE GF +QL + + N + +FSAT
Sbjct: 258 EADRLFEM---GFAEQLNELLISLPS-NRQSLLFSAT 290
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 66/186 (35%), Positives = 102/186 (54%), Gaps = 22/186 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ I A TGSGKTAAF+IP++ L + R VI+ PTRELA Q ++ +
Sbjct: 209 LGKDIVGNAVTGSGKTAAFVIPMLERLLYRDKSKNAAATRCVILVPTRELAVQCFDVATK 268
Query: 104 LSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +R ++G K Q+A+ + P DV+I TP +L+ L+ + P L
Sbjct: 269 LAAHTDVRFCLIVGGLSVKAQEASLRLRP------DVVIATPGRLIDHLR-NAPQFGLDA 321
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
V+ L++DE+D++ GF D+LA I AC P ++ M FSAT T+ V + + L +
Sbjct: 322 VDILVLDEADRMLS---DGFADELAEIVQAC--PRGRQTMLFSATMTDSVDELVKMSLNK 376
Query: 218 RVQINV 223
V++ V
Sbjct: 377 PVRLFV 382
>gi|403217984|emb|CCK72476.1| hypothetical protein KNAG_0K01110 [Kazachstania naganishii CBS
8797]
Length = 1001
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 95/157 (60%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P+I L+ +G RA+I+ P+RELA QT+N S+G
Sbjct: 175 NRDIVGMARTGSGKTAAFVLPMIEKLKTHSSKIGVRAIILSPSRELALQTHNVFKDFSKG 234
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ E+FG + DV+I TP + ++L ++M+ L L VE+ + DE
Sbjct: 235 THLRSVLLTGGDSLEEQFGMMMSNP-DVVIATPGRFLHLKVEMN---LVLKTVEYAVFDE 290
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + AA P+ ++ +FSAT
Sbjct: 291 ADRLFEM---GFQEQLNELLAAL--PSSRQTLLFSAT 322
>gi|366991885|ref|XP_003675708.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
gi|342301573|emb|CCC69343.1| hypothetical protein NCAS_0C03530 [Naumovozyma castellii CBS 4309]
Length = 977
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RELA QT+N S+G
Sbjct: 162 NRDIVGMARTGSGKTAAFILPMIEKLKTHSGKIGARAVILSPSRELAMQTHNVFKDFSKG 221
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ ++FG DV+I TP + ++L ++M+ L+L ++E+ + DE
Sbjct: 222 TQLRSVLLTGGDSLEDQFG-MMMNNPDVIIATPGRFLHLKVEMN---LDLKSIEYAVFDE 277
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF++QL + A+ P+ ++ +FSAT
Sbjct: 278 ADRLFEM---GFQEQLNELLASL--PSSRQTLLFSAT 309
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 89.7 bits (221), Expect = 8e-16, Method: Composition-based stats.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ I A TGSGKTAAF+IPI+ L +G R +++ PTRELA Q + +
Sbjct: 212 LGKDIVGNAVTGSGKTAAFMIPILERLLYRQKGKNAAATRCLVLVPTRELAVQCFEVGTK 271
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ ++ + V+G + A++ RS K D++I TP +L+ L+ + P NL ++ L
Sbjct: 272 LAAHTDIQMSLVVGGLSLKAQEATLRS--KPDLVIATPGRLIDHLR-NSPTFNLDALDVL 328
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+L I +C P ++ M FSAT T+ V + + L + V++
Sbjct: 329 VLDEADRMLS---DGFADELEEIVKSC--PRSRQTMLFSATMTDSVDELVKMSLNKPVRL 383
Query: 222 NV 223
V
Sbjct: 384 FV 385
>gi|146096246|ref|XP_001467744.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|398020630|ref|XP_003863478.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
gi|134072110|emb|CAM70809.1| putative ATP-dependent RNA helicase-like protein [Leishmania
infantum JPCM5]
gi|322501711|emb|CBZ36792.1| ATP-dependent RNA helicase-like protein, putative [Leishmania
donovani]
Length = 584
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 15/164 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL+P+ L+ P + G RA+IV PT ELA+Q E L +
Sbjct: 179 RDVLACAPTGSGKTIAFLVPLFALLKAPDASCGVRALIVTPTAELAQQIEREAFFLMK-- 236
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R + Q K D+ I TP ++V LL+ L+L+NV++L+ DE D
Sbjct: 237 GQRWKFVQHGQTTKNK---------DIFIATPGRIVSLLEQ--KLLDLSNVQYLVFDEGD 285
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+L+++ F + I AC+ + +F+AT +E V R
Sbjct: 286 RLWDSRT-DFLTVIDRILTACTRTDKVVSLFTATLSEKVEAAAR 328
>gi|367002065|ref|XP_003685767.1| hypothetical protein TPHA_0E02410 [Tetrapisispora phaffii CBS 4417]
gi|357524066|emb|CCE63333.1| hypothetical protein TPHA_0E02410 [Tetrapisispora phaffii CBS 4417]
Length = 523
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 105/184 (57%), Gaps = 14/184 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVR 103
GR + A TGSGKT AF +P I++L G + +++ PTRELA QT++ V
Sbjct: 145 GRDVIGVAETGSGKTFAFGVPAINNLVDANGQLKYKKGIQVLVISPTRELASQTFDNLVI 204
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L++ LGL V G + + ++ + +Q V++ TP +L+ LLQ +++L+NV +L
Sbjct: 205 LTDKLGLHCCCVYGGVPKDPQRTQLKVSQ---VVVATPGRLLDLLQ--EGSVDLSNVNYL 259
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ E +GF + + I + + MF+AT ++V + ++R V+++
Sbjct: 260 VLDEADRMLE---KGFEEDIKNIIRETASVGRQTLMFTATWPKEVRELASTFMERPVKVS 316
Query: 223 VGLR 226
+G R
Sbjct: 317 IGNR 320
>gi|430814638|emb|CCJ28161.1| unnamed protein product [Pneumocystis jirovecii]
Length = 772
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 14/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I L+ + +G RA+I+ P RELA QT+ L +G
Sbjct: 267 GMDVVAMARTGSGKTAAFVIPMIERLKMHQAKVGSRALILSPNRELALQTFKVVKELKKG 326
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ + E+F S D+++ TP + ++L ++MD L+L +E+++ DE
Sbjct: 327 TNLKHILLVGGESLEEQFEIMSINP-DIIVATPGRFLHLKVEMD---LDLRTIEYIVFDE 382
Query: 167 SDKLFEAGVRGFRDQLAVI--YAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D+LFE GF +QL+ I Y S + +FSAT + + ++ + L+ V I +
Sbjct: 383 ADRLFEM---GFSEQLSEILRYLPVSR---QSSLFSATLPKSLVEFAKAGLQNPVLIRLN 436
Query: 225 LR 226
+
Sbjct: 437 VE 438
>gi|226468478|emb|CAX69916.1| hypotherical protein [Schistosoma japonicum]
Length = 259
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 11/169 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTAAFLIP+ G RA+IV PTRELA QT N T L
Sbjct: 67 GRDVVAMARTGSGKTAAFLIPLFEKFPCHLPTGPRALIVSPTRELALQTLNFTKELGRYT 126
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
L+A VI + ++F + D++I TP + ++ L++M+ L+L +E+++ DE
Sbjct: 127 PLKATVILGGDKMEDQFAALHSSP-DIIIATPGRFLHILMEMN---LSLKTIEYVVFDEG 182
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
D+LFE GF +QL+ P ++ + FSAT +++ ++ R L
Sbjct: 183 DRLFEL---GFAEQLSETLKRL--PRSRQTLIFSATLPKNLVEFARAGL 226
>gi|374705810|ref|ZP_09712680.1| DEAD/DEAH box helicase [Pseudomonas sp. S9]
Length = 449
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PK-NLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A TGSGKTAAF++P+++ L G PK L RAVI+ PTRELA+QT E R S+
Sbjct: 37 GHDLRVTAQTGSGKTAAFVLPMLNRLMGDPKPRLSIRAVILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+++ +I E F ++A ++ D+LI TP +L+ + L L VE L++
Sbjct: 97 FTFIKSGLI----TGGEDFKVQAAMLRRVDILIGTPGRLIE--HANAGNLLLDEVEVLVL 150
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D++ + GF + + + ACSGP+ + +FSAT
Sbjct: 151 DEADRMLDM---GFAEDVQRLAEACSGPH-QTLLFSAT 184
>gi|47223591|emb|CAF99200.1| unnamed protein product [Tetraodon nigroviridis]
Length = 532
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 74 GKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKF 133
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
L+ +I ++F + D++I TP +L++++ +M+ L L NVE+++ DE
Sbjct: 134 TKLKTALILGGDSMDDQFAALH-ENPDIIIGTPGRLMHVIKEMN---LKLQNVEYVVFDE 189
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGL 225
+D+LFE GF +QL I P ++ +FSAT + + ++ R L V I + +
Sbjct: 190 ADRLFEM---GFAEQLQEIIRRF--PETRQTLLFSATLPKVIVEFARAGLTEPVLIRLDV 244
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTA+F++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 263 GRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKF 322
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + E+F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 323 AKAYGVRVSAVYGGMSKLEQFKELKA-GCEIVVATPGRLIDMLKMK--ALTMMRATYLVL 379
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 380 DEADRMFDL---GFEPQVRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILSDPIRVTVG 435
>gi|407918962|gb|EKG12222.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 523
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 95/177 (53%), Gaps = 19/177 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII---HSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP++ HSLR P+N G A+++ PTRELA Q + L
Sbjct: 146 GRDVLGAAKTGSGKTLAFLIPVVEMLHSLRFKPRN-GTGAIVISPTRELALQIFGVAREL 204
Query: 105 SE----GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
E G+ V+G + AE+ + + ++LI TP +L+ LQ + P N+
Sbjct: 205 MEHHTQTFGI---VMGGANRKAEQI--KLEKGVNLLIATPGRLLDHLQ-NTPGFVFKNLR 258
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLK 216
L++DE+D++ E GF D+L I P+ ++ +FSAT T V R LK
Sbjct: 259 TLVLDEADRILEV---GFEDELKAIVKILGNPDQRQTALFSATQTTKVEDLARISLK 312
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E+ +
Sbjct: 263 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYLESKKF 322
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R I E+F + +++I TP +L+ +++M AL + +L++
Sbjct: 323 AKPYGIRVSAIYGGMSKLEQFKELKS-GCEIVIATPGRLIDMIKM--KALTMLRATYLVL 379
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L V++ VG
Sbjct: 380 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILTDPVRVTVG 435
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P I+H + P ++ G VI PTRELA Q + E +
Sbjct: 265 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKF 324
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S+ GLR + E+F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 325 SKAYGLRVSAVYGGMSKHEQFKELKA-GCEIVVATPGRLIDMLKM--KALTMMRASYLVL 381
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 382 DEADRMFDL---GFEPQVRSIVGQIR-PDRQTLLFSATMPWKVEKLAREILSDPIRVTVG 437
>gi|398964629|ref|ZP_10680406.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
gi|398148015|gb|EJM36703.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
Length = 446
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVAANSARALILVPTRELAEQVHESVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R DVL+ TP +L+ LL+ + AL L ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDVLVATPGRLIDLLRQN--ALKLDQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E+ +
Sbjct: 263 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAKEEGPIGVICAPTRELAHQIYLESKKF 322
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R I E+F + +++I TP +L+ +++M AL + +L++
Sbjct: 323 AKPYGIRVSAIYGGMSKLEQFKELKS-GCEIVIATPGRLIDMIKM--KALTMLRATYLVL 379
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L V++ VG
Sbjct: 380 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILTDPVRVTVG 435
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 268 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKF 327
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + E+F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 328 AKAYGIRVSAVYGGMSKLEQFKELKA-GCEIVVATPGRLIDMLKM--KALAMLRATYLVL 384
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 385 DEADRMFDL---GFEPQVRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILSDPIRVTVG 440
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 100/193 (51%), Gaps = 32/193 (16%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I A TGSGKTAAF++PI+ L R K R +I+CPTRELA Q +N R++
Sbjct: 267 LGKDIVGAAVTGSGKTAAFVVPILERLVYRPKKIPTSRVLIICPTRELAMQCHNVAKRIA 326
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
GL L K+Q+ + P D++I TP + + ++ +
Sbjct: 327 AFTDITLCLCVGGLSL------KVQEQELRKRP------DIIIATPGRFIDHVR-NSQGF 373
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRR 213
++ N+E +++DE+D++ E GF D+L I C P ++ M FSAT TE V R
Sbjct: 374 SVDNIEIMVIDEADRMLED---GFADELNEIVKLC--PKSRQTMLFSATMTEKVDDLVRL 428
Query: 214 KLKRRVQINVGLR 226
L R V+I V +
Sbjct: 429 SLNRPVRIFVDAK 441
>gi|407915825|gb|EKG09337.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 737
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKT F +P + H + PK G +AVIV PTRELA Q + + V+++E
Sbjct: 359 GRDVIGVAETGSGKTLGFGVPCVRHIMSLPKAKGVKAVIVSPTRELASQIHEQLVKIAEP 418
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
GL++ I G + + +K G +K +++ TP +L L+ D A +++ ++++DE
Sbjct: 419 AGLKSVCIYGGVPKDEQKAG---LKKASIVVATPGRLNDLI--DEGAADISKAGYVVLDE 473
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ + +GF D + I ++ N ++ MF+AT + V + +K V+I +G
Sbjct: 474 ADRMLD---KGFEDAIRKIISSTRPINERQTLMFTATWPKSVQELASTFMKSPVKITIG 529
>gi|348685911|gb|EGZ25726.1| hypothetical protein PHYSODRAFT_486355 [Phytophthora sojae]
Length = 852
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 9/166 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ A A TGSGKTAAFLIP++ L+ +G RAV++ PTRELA QT +LS+
Sbjct: 73 GKDCVAMARTGSGKTAAFLIPMLEKLKEHSTKIGVRAVVLSPTRELAVQTLRFAKQLSKF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L+ +I + ++F +A DVL+ TP +L++ LQ + P NL VE+++ DE+
Sbjct: 133 TSLKMALIVGGEGMDQQFEAIAANP-DVLVATPGRLMHHLQ-EIPDFNLKAVEYVVFDEA 190
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCR 212
D++FE GF +QL I P ++ +FSAT + + ++ R
Sbjct: 191 DRIFEM---GFAEQLQEILKNM--PTSRQTLLFSATLPKALVQFAR 231
>gi|430811574|emb|CCJ30960.1| unnamed protein product [Pneumocystis jirovecii]
Length = 906
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 14/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAF+IP+I L+ + +G RA+I+ P RELA QT+ L +G
Sbjct: 401 GMDVVAMARTGSGKTAAFVIPMIERLKMHQAKVGSRALILSPNRELALQTFKVVKELKKG 460
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ + E+F S D+++ TP + ++L ++MD L+L +E+++ DE
Sbjct: 461 TNLKHILLVGGESLEEQFEIMSINP-DIIVATPGRFLHLKVEMD---LDLRTIEYIVFDE 516
Query: 167 SDKLFEAGVRGFRDQLAVI--YAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D+LFE GF +QL+ I Y S + +FSAT + + ++ + L+ V I +
Sbjct: 517 ADRLFEM---GFSEQLSEILRYLPVS---RQSSLFSATLPKSLVEFAKAGLQNPVLIRLN 570
Query: 225 LR 226
+
Sbjct: 571 VE 572
>gi|392542989|ref|ZP_10290126.1| ATP-dependent RNA helicase SrmB [Pseudoalteromonas piscicida JCM
20779]
Length = 408
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGF-RAVIVCPTRELAKQTYNETVRL 104
+GR I A APTG+GKTAAFLIP I L K GF R +I+ PTRELA Q + + L
Sbjct: 37 IGRDILASAPTGTGKTAAFLIPAIQYLLDFPRKEPGFARVLIMTPTRELAYQIHEQCELL 96
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ G+ L+ V+ G I + K + D+LI TP +L+ L+ + + NVE LI
Sbjct: 97 AAGVNLKIGVVTGGINYGSHK--EIFEKNNDILIATPGRLMEYLETE--NFHAENVELLI 152
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSAT-HTEDVAKWCRRKLK 216
+DE+D++ + GFR ++ I CS +R +FSAT E V K+ R L+
Sbjct: 153 LDEADRMLDM---GFRKEMLRI---CSEAVNRRQCFLFSATLEGESVEKFAERILQ 202
>gi|241953571|ref|XP_002419507.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223642847|emb|CAX43102.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 667
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGP-----KNLGFRA-------VIVCPTRELA 94
GR + ACA TGSGKT FL P++ ++GP N F + +++ PTREL
Sbjct: 224 GRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTTLVMAPTRELV 283
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPA 153
Q Y E+ + S +RA V+ ++ R+ + D+L+ TP +L LL D
Sbjct: 284 SQIYEESKKFSYRSWVRACVVYGGADIGQQM--RNMDRGCDLLVATPGRLKDLL--DRGK 339
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKW 210
++LAN+ +L++DE+D++ + GF Q+ I C P +K MFSAT D+
Sbjct: 340 VSLANIRYLVLDEADRMLDM---GFEPQIRYIVDECDMPAVKDRQTLMFSATFPRDIQML 396
Query: 211 CRRKLKRRVQINVG 224
R LK + ++VG
Sbjct: 397 ARDFLKDYIFLSVG 410
>gi|409201536|ref|ZP_11229739.1| ATP-dependent RNA helicase SrmB [Pseudoalteromonas flavipulchra
JG1]
Length = 408
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 98/176 (55%), Gaps = 17/176 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGF-RAVIVCPTRELAKQTYNETVRL 104
+GR I A APTG+GKTAAFLIP I L K GF R +I+ PTRELA Q + + L
Sbjct: 37 IGRDILASAPTGTGKTAAFLIPAIQYLLDFPRKEPGFARVLIMTPTRELAYQIHEQCELL 96
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ G+ L+ V+ G I + K + D+LI TP +L+ L+ + + NVE LI
Sbjct: 97 AAGVNLKIGVVTGGINYGSHK--EIFEKNNDILIATPGRLMEYLETE--NFHAENVELLI 152
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSAT-HTEDVAKWCRRKLK 216
+DE+D++ + GFR ++ I CS +R +FSAT E V K+ R L+
Sbjct: 153 LDEADRMLDM---GFRKEMLRI---CSEAVNRRQCFLFSATLEGESVEKFAERILQ 202
>gi|358393875|gb|EHK43276.1| hypothetical protein TRIATDRAFT_32758 [Trichoderma atroviride IMI
206040]
Length = 903
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT L G
Sbjct: 122 RDVVGMARTGSGKTAAFVIPMIERLRAHSSKFGARALILSPSRELAIQTLKVVKELGRGT 181
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+FG SA D++I TP + ++L ++M+ L+L+++++++ DE+
Sbjct: 182 DLKAVLLVGGDSLEEQFGFMSANP-DIVIATPGRFLHLKVEMN---LDLSSIKYVVFDEA 237
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 238 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPASLVEFARAGLQ 282
>gi|50289021|ref|XP_446940.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661294|sp|Q6FS54.1|DBP3_CANGA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49526249|emb|CAG59873.1| unnamed protein product [Candida glabrata]
Length = 540
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 105/181 (58%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I++L K G + +++ PTRELA Q Y+ V L++
Sbjct: 165 GKDVIGVAETGSGKTFAFGVPAINNLLTSSSKPKGIKVLVISPTRELASQIYDNLVLLTQ 224
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+G+ V+ G + + ++ R K +V++ TP +L+ L++ +++L+ V+++++D
Sbjct: 225 KVGIDCCVVYGGVPKDDQR---RQIAKSNVVVATPGRLLDLIEEG--SVDLSPVDYMVLD 279
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + MF+AT ++V + +K V++++G
Sbjct: 280 EADRMLE---KGFEEDIKRIIGQTKSKDRQTLMFTATWPKEVRELASTFMKEPVKVSIGN 336
Query: 226 R 226
R
Sbjct: 337 R 337
>gi|68478729|ref|XP_716633.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|74656359|sp|Q5A4E2.1|DED1_CANAL RecName: Full=ATP-dependent RNA helicase DED1
gi|46438305|gb|EAK97638.1| hypothetical protein CaO19.7392 [Candida albicans SC5314]
gi|238881007|gb|EEQ44645.1| ATP-dependent RNA helicase ded1 [Candida albicans WO-1]
Length = 672
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGP-----KNLGFRA-------VIVCPTRELA 94
GR + ACA TGSGKT FL P++ ++GP N F + +++ PTREL
Sbjct: 223 GRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELV 282
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPA 153
Q Y E+ + S +RA V+ ++ R+ + D+L+ TP +L LL D
Sbjct: 283 SQIYEESKKFSYRSWVRACVVYGGADIGQQM--RNMDRGCDLLVATPGRLKDLL--DRGK 338
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKW 210
++LAN+ +L++DE+D++ + GF Q+ I C P +K MFSAT D+
Sbjct: 339 VSLANIRYLVLDEADRMLDM---GFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQML 395
Query: 211 CRRKLKRRVQINVG 224
R LK V ++VG
Sbjct: 396 ARDFLKDYVFLSVG 409
>gi|428163077|gb|EKX32169.1| hypothetical protein GUITHDRAFT_121663 [Guillardia theta CCMP2712]
Length = 914
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 8/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFL+P+ L+ +G RA+I+ PTRELA QT L +
Sbjct: 187 GHDLVAMARTGSGKTAAFLLPMFERLKEHSVKVGIRALILSPTRELALQTLKFGKELGKY 246
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GLR ++ ++F A DV+I TP +L++ ++ L L +V++++ DE
Sbjct: 247 TGLRMALLVGGDSMEDQFAAL-AHNPDVVIATPGRLLH--HLEEVGLTLQSVQYIVFDEC 303
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF +L I S N + +FSAT +A++ R LK
Sbjct: 304 DRLFEM---GFAAELRAIMKKVSD-NRQTLLFSATLPAALAEFARAGLK 348
>gi|452978780|gb|EME78543.1| hypothetical protein MYCFIDRAFT_10719, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 855
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 12/171 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G RAV++ P+RELA QT + G
Sbjct: 66 GQDVVGMARTGSGKTAAFVIPMIEKLKSHSAKVGARAVVLSPSRELALQTLKVVKEMGRG 125
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ ++FG ++ D++I TP + +L ++M L L++V++++ DE
Sbjct: 126 TDLRTTLLVGGDSLEDQFGSMASNP-DIIIATPGRFEHLKVEM---GLELSSVKYVVFDE 181
Query: 167 SDKLFEAGVRGFRDQL-AVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL ++Y+ S N + +FSAT + + ++ R L+
Sbjct: 182 ADRLFEM---GFAAQLHEIMYSLPS--NRQTLLFSATLPKSLVEFARAGLQ 227
>gi|291239420|ref|XP_002739621.1| PREDICTED: Rs1-like [Saccoglossus kowalevskii]
Length = 563
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 105/181 (58%), Gaps = 18/181 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L PK R +++ PTREL Q ++ T +L+
Sbjct: 32 LGKDICACAATGTGKTAAFMLPVLERLLYKPKQAAVTRVLVLVPTRELGIQVHSVTRQLA 91
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + + +G K+Q+A + GP D++I TP +L+ L + P+ +L+N+E
Sbjct: 92 QFTEIDSCLAVGGLDVKLQEAVLRQGP------DIVIATPGRLIDHLH-NAPSFSLSNIE 144
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + +FSAT T++V LK V+
Sbjct: 145 ILILDEADRMLDE---YFEEQMKEIIRMCSITR-QTMLFSATMTDEVKDLVAVSLKNPVR 200
Query: 221 I 221
+
Sbjct: 201 L 201
>gi|389685466|ref|ZP_10176790.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
gi|388551119|gb|EIM14388.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis O6]
Length = 445
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L+ Q++ L+L VE
Sbjct: 97 FTFIKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRLIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF D + + C PN ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFADDVQRLVDEC--PNRQQTMLFSAT 185
>gi|443720455|gb|ELU10207.1| hypothetical protein CAPTEDRAFT_141736, partial [Capitella teleta]
Length = 616
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 20/168 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAFL+P++ L R + R +++ PTRELA Q + +L+
Sbjct: 70 LGKDICACAATGTGKTAAFLLPVLERLLYRPRQAPVTRVLVLTPTRELAVQIHTVARQLT 129
Query: 106 EGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + K Q+AA + GP D++I TP +L+ L + P NL +VE
Sbjct: 130 QFTNIETSLSAGGMDVKAQEAALRLGP------DIVIATPGRLIDHLH-NAPNFNLNSVE 182
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDV 207
LI+DE+D++ + F +Q+ + + C+ +++ M FSAT TE+V
Sbjct: 183 VLILDEADRMLD---EYFAEQMKEVISLCA--TVRQTMLFSATMTEEV 225
>gi|389751392|gb|EIM92465.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 812
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP+I L +G K R +I+ PTRELA Q Y +
Sbjct: 250 LGKDVVGNAVTGSGKTAAFIIPMIERLLYRDKGKKAAATRCLILVPTRELAVQCYEVGKK 309
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L ++ ++G + +++ R+ + DV+I TP +L+ L+ + P+ L ++ L
Sbjct: 310 LGTHTDIQFCLIVGGLSLKSQEVALRA--RPDVVIATPGRLIDHLR-NSPSFTLDALDIL 366
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+L I +C P ++ M FSAT T+ V + + L + V++
Sbjct: 367 VLDEADRMLS---DGFADELTEIIQSC--PTSRQTMLFSATMTDSVDELVKMSLNKPVRL 421
Query: 222 NV 223
V
Sbjct: 422 FV 423
>gi|357017323|gb|AET50690.1| hypothetical protein [Eimeria tenella]
Length = 639
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 11/156 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A APTGSGKT AFL+P+I L+ P++ R V++ PTRELA+Q+ RL+EG
Sbjct: 164 GRHLLASAPTGSGKTLAFLLPVITCLKAPRSAFGRLVVLSPTRELARQSLRTFQRLTEGT 223
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G +A + ++G D + TP L+ LL+ L+L++ + L++DE+D
Sbjct: 224 GFKAAF--PQSHSGSRYG-----AADAVFATPLSLLTLLKEK--RLSLSDCQHLVLDEAD 274
Query: 169 KLFEAGVRGFRDQL--AVIYAACSGPNLKRGMFSAT 202
+L ++G D L + A + L +FSAT
Sbjct: 275 RLLDSGFSPQVDALLFEIKSATATAKRLHICLFSAT 310
>gi|366993102|ref|XP_003676316.1| hypothetical protein NCAS_0D03740 [Naumovozyma castellii CBS 4309]
gi|342302182|emb|CCC69955.1| hypothetical protein NCAS_0D03740 [Naumovozyma castellii CBS 4309]
Length = 519
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I+ L K+ G + +++ PTRELA Q Y+ + L++
Sbjct: 147 GKDVIGVAETGSGKTFAFGVPAINYLVLNNGKSKGVQVLVISPTRELASQIYDNLIVLTD 206
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+GL V G + + A++ R +Q V++ TP +L+ L+Q +++L+ V++L++D
Sbjct: 207 KVGLECCCVYGGVPKDAQRAQLRRSQ---VVVATPGRLLDLIQ--EGSVDLSAVKYLVLD 261
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + + MF+AT ++V + + + V++++G
Sbjct: 262 EADRMLE---KGFEEDIKNIIRETATKDRQTLMFTATWPKEVRELASSFMNKPVKVSIGN 318
Query: 226 R 226
R
Sbjct: 319 R 319
>gi|398852711|ref|ZP_10609359.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
gi|398243285|gb|EJN28876.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
Length = 445
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ S+ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLSMEGPKVAANSARALILVPTRELAEQVHESVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R DVL+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDVLVATPGRLIDLFRQN--ALKLDQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|348532949|ref|XP_003453968.1| PREDICTED: ATP-dependent RNA helicase DDX54-like, partial
[Oreochromis niloticus]
Length = 336
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 104/180 (57%), Gaps = 12/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 113 GKDVVAMARTGSGKTAAFLIPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKF 172
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L++ +++M+ L L +V +++ DE
Sbjct: 173 TGLKTALILGGDRMEDQFAALH-ENPDIIIGTPGRLMHVVMEMN---LKLHSVAYVVFDE 228
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGL 225
+D+LFE GF +QL I P+ ++ +FSAT + + ++ R L V I + +
Sbjct: 229 ADRLFEM---GFAEQLQEIIRRL--PDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDV 283
>gi|50305865|ref|XP_452893.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660558|sp|Q6CT46.1|DBP3_KLULA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49642026|emb|CAH01744.1| KLLA0C15499p [Kluyveromyces lactis]
Length = 504
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 105/181 (58%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I+++ G K+ + +++ PTRELA Q Y+ + L++
Sbjct: 129 GKDVIGIAETGSGKTFAFGVPAINNIVTSGDKSSSVKVLVISPTRELASQIYDNLIVLTD 188
Query: 107 GLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
GLR+ V G + + ++ R +Q V++ TP +L+ L++ +++L++V +L++D
Sbjct: 189 ACGLRSCCVYGGVPKDQQREDLRRSQ---VVVATPGRLLDLIE--EGSVDLSHVNYLVLD 243
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + MF+AT ++V + + V++++G
Sbjct: 244 EADRMLE---KGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEPVKVSIGN 300
Query: 226 R 226
R
Sbjct: 301 R 301
>gi|399004628|ref|ZP_10707239.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
gi|398129239|gb|EJM18612.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
Length = 445
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
L+ Q++ L+L VE L++DE+D++ + GF D + + C PN ++ M FSA
Sbjct: 132 LIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|425898142|ref|ZP_18874733.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397891895|gb|EJL08373.1| DEAD/DEAH box helicase domain protein [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 445
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
L+ Q++ L+L VE L++DE+D++ + GF D + + C PN ++ M FSA
Sbjct: 132 LIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|259155174|ref|NP_001158829.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
gi|223647616|gb|ACN10566.1| ATP-dependent RNA helicase DDX54 [Salmo salar]
Length = 875
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 93/156 (59%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFL+P+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 114 GKDMVAMARTGSGKTAAFLVPMFEKLKVPQAQTGARALILTPTRELALQTMKFTKELGKF 173
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L++ +++M+ L L +VE+++ DE
Sbjct: 174 TGLKTALILGGDRMDDQFAALH-ENPDIIIGTPGRLMHVVMEMN---LKLQSVEYVVFDE 229
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF DQL I N + +FSAT
Sbjct: 230 ADRLFEM---GFADQLQEIIRRLPD-NRQTLLFSAT 261
>gi|297828467|ref|XP_002882116.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
gi|297327955|gb|EFH58375.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
Length = 739
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P I+H + P K+ G VI PTRELA Q + E +
Sbjct: 266 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQKDEGPIGVICAPTRELAHQIFLEAKKF 325
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S+ GLR + E+F A ++++ TP +L+ +L++ AL + +L++
Sbjct: 326 SKAYGLRVSAVYGGMSKHEQFKELKA-GCEIVVATPGRLIDMLKI--KALTMMRASYLVL 382
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 383 DEADRMFDL---GFEPQVRSIVGQIR-PDRQTLLFSATMPWKVEKLAREILSDPIRVTVG 438
>gi|432859445|ref|XP_004069111.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Oryzias
latipes]
Length = 771
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 30/193 (15%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETV 102
+S LGR + ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++
Sbjct: 231 VSLLGRDLCACAATGTGKTAAFMLPVLERLIYKPRTSQVTRVLVLVPTRELGIQVHSVAR 290
Query: 103 RLSE-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
+L++ GL L++ Q+AA + GP DVLI TP +L+ L +
Sbjct: 291 QLAQFTSITTCLAVGGLDLKS------QEAALRAGP------DVLIATPGRLIDHLH-NT 337
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
P L+++E LI+DE+D++ + F +Q+ I CS N + +FSAT TE+V
Sbjct: 338 PNFELSHIEILILDEADRMLDE---YFEEQMKEIIRLCSY-NRQTMLFSATMTEEVKDLA 393
Query: 212 RRKLKRRVQINVG 224
LK+ V+I V
Sbjct: 394 AVSLKQPVRIFVN 406
>gi|440799062|gb|ELR20123.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 762
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 106/187 (56%), Gaps = 20/187 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TGSGKTA+F++PI+ L R + + R VI+ PTRELA Q ++ +L++
Sbjct: 230 GKDVCASATTGSGKTASFVLPILERLIHRDKRIMATRVVILTPTRELAIQCHSVIEKLAK 289
Query: 107 GLGLRAHVI-----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ A ++ K+Q+AA + P D+++ TP +++ L+ + + L V+
Sbjct: 290 FTDITACLVVGGLSNKVQEAALRRHP------DIVVATPGRIIDHLR-NAQSFTLETVDI 342
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR--RV 219
L++DE+D+L GF D+L I C PN + +FSAT TE+V + L R RV
Sbjct: 343 LVLDEADRLLSL---GFADELEQIIKFCP-PNRQTLLFSATMTEEVDRLASLSLNRPVRV 398
Query: 220 QINVGLR 226
+++ +R
Sbjct: 399 RLDPNMR 405
>gi|268573988|ref|XP_002641971.1| Hypothetical protein CBG16678 [Caenorhabditis briggsae]
Length = 972
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/185 (34%), Positives = 102/185 (55%), Gaps = 18/185 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P+ G AVI+ PTRELA QTY E +
Sbjct: 344 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 403
Query: 105 SEGLGLRAHV----IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
++ LGLR +G +Q A+ R A+ +++ TP +++ +L + + NL V
Sbjct: 404 AKVLGLRVACTYGGVGISEQIADL--KRGAE---IVVCTPGRMIDVLAANSGKVTNLRRV 458
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++F+ +GF Q+ + P+ + +FSAT + R+ L + V
Sbjct: 459 TYLVLDEADRMFD---KGFEPQIMKVVNNIR-PDKQTVLFSATFPRHMEALARKVLDKPV 514
Query: 220 QINVG 224
+I VG
Sbjct: 515 EILVG 519
>gi|260942725|ref|XP_002615661.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
gi|238850951|gb|EEQ40415.1| hypothetical protein CLUG_04543 [Clavispora lusitaniae ATCC 42720]
Length = 955
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAF++P+I L+ +G R+VI+ P+RELA QT+ + S+G
Sbjct: 155 NRDVVGMARTGSGKTAAFVLPVIEKLKSHSAKVGARSVILSPSRELALQTFKQVKEFSKG 214
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ V+ E+F + D+++ TP + ++L ++M L+L+ VE+++ DE
Sbjct: 215 TDLRSVVLIGGDSLEEQFSSMMSNP-DIIVATPGRFLHLQVEM---QLDLSTVEYIVFDE 270
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL + A P ++ +FSAT
Sbjct: 271 ADRLFEM---GFAEQLNELLAIL--PTSRQSLLFSAT 302
>gi|398392503|ref|XP_003849711.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
gi|339469588|gb|EGP84687.1| hypothetical protein MYCGRDRAFT_75563 [Zymoseptoria tritici IPO323]
Length = 833
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G RA+++ P+RELA QT +S G
Sbjct: 33 GQDVVGMARTGSGKTAAFVIPMIEKLKSHSAKVGARAIVLSPSRELALQTLKVVKEMSRG 92
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ E+F ++ D++I TP + +L ++M +L L++V++++ DE
Sbjct: 93 TDLRTTLLVGGDSLEEQFSSMASNP-DIIIATPGRFEHLKVEM---SLELSSVKYVVFDE 148
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL I + N + +FSAT + + ++ R L+
Sbjct: 149 ADRLFEM---GFAAQLLEIMHSLPS-NRQTLLFSATLPKSLVEFARAGLQ 194
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L RG K R +++ PTREL Q + +
Sbjct: 223 LGKDVVGNAVTGSGKTAAFIIPMLERLMYRDRGKKAAATRCLVLVPTRELGVQCFEVGTK 282
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ +R A V+G + A++ R+ + DV+I TP +L+ ++ + P L ++ L
Sbjct: 283 LAAHTDIRFALVVGGLSIKAQEANLRT--RPDVVIATPGRLIDHIR-NSPTFTLDALDIL 339
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ E GF D+L I +C P ++ M FSAT T+ V + R L + V++
Sbjct: 340 VLDEADRMLED---GFADELTEIIKSC--PTSRQTMLFSATMTDSVDELVRMSLNKPVRL 394
Query: 222 NV 223
V
Sbjct: 395 FV 396
>gi|402593242|gb|EJW87169.1| DEAD/DEAH box helicase, partial [Wuchereria bancrofti]
Length = 746
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ I A + TGSGKTAAF+IPI+ L+ G RA+I+ PTRELA QT+ L
Sbjct: 32 GKDIVAMSRTGSGKTAAFVIPILQKLKVRDMKGIRALIIEPTRELAMQTFTVVKELGRFT 91
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR V+ + E+F +K D++I TP +L++ +++MD L+ V+ ++ DE+
Sbjct: 92 GLRCAVLVGGDRIEEQFQA-VHEKPDIVIATPGRLLHVIVEMD---FRLSAVQVIVFDEA 147
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + N + +FSAT
Sbjct: 148 DRLFEM---GFAEQLHEVLKRLP-ENRQTLLFSAT 178
>gi|296212991|ref|XP_002753123.1| PREDICTED: ATP-dependent RNA helicase DDX54, partial [Callithrix
jacchus]
Length = 471
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 10/177 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE GF +QL I A G + + +FSAT + + ++ R L V I +
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 301
>gi|398869109|ref|ZP_10624494.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
gi|398231623|gb|EJN17609.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
Length = 446
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVAANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYKAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|432885908|ref|XP_004074816.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Oryzias
latipes]
Length = 853
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFL+P+ L+ P+ + G RA+I+ PTRELA QT T L +
Sbjct: 115 GKDVVAMARTGSGKTAAFLVPMFEKLKAPQASAGARALIMSPTRELALQTMKFTKELGKF 174
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L++++ +M+ L L +VE+++ DE
Sbjct: 175 AGLKTALILGGDRMEDQFAALH-ENPDIIIGTPGRLMHVVKEMN---LKLHSVEYVVFDE 230
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL I P+ ++ +FSAT
Sbjct: 231 ADRLFEM---GFAEQLQEIIQRL--PDTRQTLLFSAT 262
>gi|432885906|ref|XP_004074815.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Oryzias
latipes]
Length = 852
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 96/157 (61%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFL+P+ L+ P+ + G RA+I+ PTRELA QT T L +
Sbjct: 114 GKDVVAMARTGSGKTAAFLVPMFEKLKAPQASAGARALIMSPTRELALQTMKFTKELGKF 173
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L++++ +M+ L L +VE+++ DE
Sbjct: 174 AGLKTALILGGDRMEDQFAALH-ENPDIIIGTPGRLMHVVKEMN---LKLHSVEYVVFDE 229
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL I P+ ++ +FSAT
Sbjct: 230 ADRLFEM---GFAEQLQEIIQRL--PDTRQTLLFSAT 261
>gi|392597372|gb|EIW86694.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 750
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 103/189 (54%), Gaps = 22/189 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
+G+ I A TGSGKTAAF+IP++ L +G R +I+ PTREL Q Y +
Sbjct: 214 IGKDIVGNAVTGSGKTAAFVIPMLERLLYREKGKSAAATRCLILVPTRELGVQCYEVAQK 273
Query: 104 LSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ R A V+G K Q+AA + P DV+I TP +LV + + P+ NL
Sbjct: 274 LAAYTDARIALVVGGLSLKSQEAALRTRP------DVVIATPGRLVDHIH-NSPSFNLDA 326
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ L++DE+D++ GF D+L+ I AC P ++ M FSAT T+ V + + L +
Sbjct: 327 LDILVLDEADRMLS---EGFADELSEIIKAC--PKSRQTMLFSATMTDSVDELVKMSLNK 381
Query: 218 RVQINVGLR 226
V++ V R
Sbjct: 382 PVRLFVDPR 390
>gi|443712578|gb|ELU05832.1| hypothetical protein CAPTEDRAFT_148777 [Capitella teleta]
Length = 902
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A A TGSGKTAAFLIP+ L+G G RA+I+ PTRELA QT T L +
Sbjct: 186 GKDVVAMARTGSGKTAAFLIPMFEKLKGHLPTGARALILAPTRELALQTLKFTKELGKFT 245
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDES 167
GL+ VI +F + D+LI TP + +++L +M+ + L+ V++++ DE+
Sbjct: 246 GLKPAVILGGDSMENQFAA-IHENPDILIATPGRFMHILVEME---MKLSEVQYVVYDEA 301
Query: 168 DKLFEAGVRGFRDQLAVI 185
D+LFE GF +QL I
Sbjct: 302 DRLFEM---GFSEQLHEI 316
>gi|398896410|ref|ZP_10647539.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
gi|398178670|gb|EJM66315.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
Length = 445
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYKAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|268553635|ref|XP_002634804.1| Hypothetical protein CBG13909 [Caenorhabditis briggsae]
Length = 845
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 82/135 (60%), Gaps = 8/135 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF+IP++ L+G G RA++V PTRELA QT+ L
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKGRDTKGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR + ++F + D+L+ TP +L++ +++MD L L V++++ DE+
Sbjct: 121 GLRCACLVGGDVLEDQFST-IHENPDILLATPGRLLHVIVEMD---LRLQFVQYVVFDEA 176
Query: 168 DKLFEAGVRGFRDQL 182
D+LFE GF+DQL
Sbjct: 177 DRLFEM---GFQDQL 188
>gi|444315728|ref|XP_004178521.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
gi|387511561|emb|CCH59002.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
Length = 929
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAFL+P+I L+ +G R VI+ P+RE+A QT+ S+
Sbjct: 143 RDIVGMARTGSGKTAAFLLPMIEKLKTHSSKIGVRGVILSPSREIAIQTHRVFKEFSKNT 202
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++FG + DV+I TP + ++L ++M L+L +VE+++ DE+
Sbjct: 203 ELRSVLLTGGDSLEDQFGMMMSNP-DVVIATPGRFLHLKVEM---KLDLKSVEYIVFDEA 258
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF +QL + AA N + +FSAT + ++ + LK
Sbjct: 259 DRLFEM---GFEEQLNELLAALP-DNRQSLLFSATLPNSLVEFAKAGLK 303
>gi|449486366|ref|XP_002191498.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Taeniopygia guttata]
Length = 757
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 30/189 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 215 LGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 274
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL + K Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 275 QFSNVTTCLAVGGLDV------KTQEAALRSGP------DILIATPGRLIDHLH-NCPSF 321
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L++VE LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V
Sbjct: 322 HLSSVEVLILDEADRMLDE---YFEEQMKEIIRLCSH-HRQTMLFSATMTEEVKDLASVS 377
Query: 215 LKRRVQINV 223
LK V+I V
Sbjct: 378 LKNPVRIFV 386
>gi|116196072|ref|XP_001223848.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
gi|118575168|sp|Q2H0R2.1|DBP10_CHAGB RecName: Full=ATP-dependent RNA helicase DBP10
gi|88180547|gb|EAQ88015.1| hypothetical protein CHGG_04634 [Chaetomium globosum CBS 148.51]
Length = 762
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT L +G
Sbjct: 124 RDVVGMARTGSGKTAAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGKGT 183
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG +A D++I TP + ++L ++M +LNL++V +++ DE+
Sbjct: 184 DLKTVLLVGGDSLEEQFGLMAANP-DIIIATPGRFLHLKVEM---SLNLSSVRYVVFDEA 239
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 240 DRLFEM---GFAAQLTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 284
>gi|388580558|gb|EIM20872.1| DEAD-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 801
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 23/211 (10%)
Query: 25 LAVVSNSIFKHFEP-HFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSL-----RGPK 78
L +S F H P T+ ++ G+ + A TGSGKTAAF++P++ L K
Sbjct: 217 LKAISGLGFTHPTPIQKTVMPVALAGKDVVGQAVTGSGKTAAFILPVLERLMYRPKTSSK 276
Query: 79 NLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIG------KIQQAAEKFGPRSAQK 132
R +++CPTRELA+Q + LS+ +G + + K+Q+ K Q+
Sbjct: 277 GGETRVLVLCPTRELAQQCFEVGQSLSKFMGDISFCLCVGGLSLKLQEQQLK------QR 330
Query: 133 FDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP 192
DV+I TP +L+ ++ + P+ L ++ LI+DE+D++ E GF+D+L I C
Sbjct: 331 PDVVIATPGRLIDHVR-NSPSFTLDALDILIMDEADRMLE---DGFKDELDEIVKECP-K 385
Query: 193 NLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
N + +FSAT T+ V + R L + V++ V
Sbjct: 386 NRQTMLFSATMTDKVDELVRLSLNKPVRLFV 416
>gi|50312293|ref|XP_456179.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74689956|sp|Q6CIR0.1|DBP10_KLULA RecName: Full=ATP-dependent RNA helicase DBP10
gi|49645315|emb|CAG98887.1| KLLA0F24684p [Kluyveromyces lactis]
Length = 973
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 93/155 (60%), Gaps = 10/155 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RELA QT+ S+G
Sbjct: 164 RDIVGMARTGSGKTAAFVLPMIEKLKTHSAKIGVRAVILSPSRELAIQTHRVFKEFSKGS 223
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++FG DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 224 DLRSILLTGGDSLEDQFGMMMGNP-DVVIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 279
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF++QL + A N + +FSAT
Sbjct: 280 DRLFEM---GFQEQLNELLVAFP-TNRQTLLFSAT 310
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + ++L G AVI+ PTRELA Q E +
Sbjct: 409 GRDLMGIAKTGSGKTMAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF 468
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 469 SKTLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 524 TYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKPI 579
Query: 220 QINVGLR 226
++ VG R
Sbjct: 580 EVQVGGR 586
>gi|170590083|ref|XP_001899802.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158592721|gb|EDP31318.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 782
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ I A + TGSGKTAAF+IPI+ L+ G RA+I+ PTRELA QT+ L
Sbjct: 68 GKDIVAMSRTGSGKTAAFVIPILQKLKVRDMKGIRALIIEPTRELAMQTFTVVKELGRFT 127
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR V+ + E+F +K D++I TP +L++ +++MD L+ V+ ++ DE+
Sbjct: 128 GLRCAVLVGGDRIEEQFQT-VHEKPDIVIATPGRLLHVIVEMD---FRLSAVQVIVFDEA 183
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + N + +FSAT
Sbjct: 184 DRLFEM---GFAEQLHEVLKRLP-ENRQTLLFSAT 214
>gi|426411630|ref|YP_007031729.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
gi|426269847|gb|AFY21924.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
Length = 446
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|156846782|ref|XP_001646277.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
gi|160380605|sp|A7TGW7.1|DBP10_VANPO RecName: Full=ATP-dependent RNA helicase DBP10
gi|156116952|gb|EDO18419.1| hypothetical protein Kpol_1032p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 977
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 93/155 (60%), Gaps = 10/155 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RELA QT+ S+G
Sbjct: 159 RDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGARAVILSPSRELALQTHRVFKEFSKGT 218
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ ++F + DV++ TP + ++L ++M +L+L VE+++ DE+
Sbjct: 219 HLRSVLLTGGDSLEDQFSMMMSNP-DVIVATPGRFLHLKVEM---SLDLKTVEYVVFDEA 274
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF++QL + AA N + +FSAT
Sbjct: 275 DRLFEM---GFQEQLNELLAALP-MNRQTLLFSAT 305
>gi|398954425|ref|ZP_10675961.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|398152444|gb|EJM40963.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
Length = 446
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|398931338|ref|ZP_10665140.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
gi|398163790|gb|EJM51940.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
Length = 446
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|390604335|gb|EIN13726.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 785
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP++ L R K+ R +++ PTREL Q + +
Sbjct: 234 LGKDVVGNAVTGSGKTAAFIIPMLERLLYRDRAKKSAATRCLVLVPTRELGVQCFEVGTK 293
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L+ +R +G + +++ RS K DV+I TP +L+ L+ + P+ NL ++ L
Sbjct: 294 LATYTDIRFCLAVGGLSVKSQEAALRS--KPDVVIATPGRLIDHLR-NSPSFNLDALDIL 350
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+LA I +C P ++ M FSAT T+ V + + L + V++
Sbjct: 351 VLDEADRMLSD---GFADELAEIIKSC--PKSRQTMLFSATMTDSVDELVKMSLDKPVRL 405
Query: 222 NV 223
V
Sbjct: 406 FV 407
>gi|255719590|ref|XP_002556075.1| KLTH0H04466p [Lachancea thermotolerans]
gi|238942041|emb|CAR30213.1| KLTH0H04466p [Lachancea thermotolerans CBS 6340]
Length = 553
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P IH+L+ K+ G + +++ PTRELA Q Y+ + L++
Sbjct: 178 GKDVVGVAETGSGKTFAFGVPAIHNLKTADAKSQGVQVLVISPTRELASQIYDNLILLTK 237
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
G+ V G + + ++ + +Q V++ TP +L+ L++ + L+NV++L++D
Sbjct: 238 KAGVNCCCVYGGVPKDEQRSQLKKSQ---VVVATPGRLLDLIE--EGSARLSNVKYLVLD 292
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + MF+AT ++V + + V+I++G
Sbjct: 293 EADRMLE---KGFEEDIKRIIGSTKATGRQTLMFTATWPKEVRELANTFMDSPVKISIGN 349
Query: 226 R 226
R
Sbjct: 350 R 350
>gi|448102171|ref|XP_004199738.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359381160|emb|CCE81619.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 939
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 10/155 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF++P+I L+ LG RA+I+ P+RELA QT+ + S+G
Sbjct: 145 RDVVGMARTGSGKTAAFVLPLIEKLKSHSPVLGARALILSPSRELALQTFRQVKEFSKGT 204
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR V+ E F D+++ TP + ++L ++M L+L+ +E+++ DE+
Sbjct: 205 DLRTVVLVGGDSLEEHFSSLMNNP-DIVVATPGRFLHLKVEMQ---LDLSTMEYVVFDEA 260
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + AA + +FSAT
Sbjct: 261 DRLFEM---GFAEQLNELLAALPASR-QTLLFSAT 291
>gi|326435254|gb|EGD80824.1| hypothetical protein PTSG_11725 [Salpingoeca sp. ATCC 50818]
Length = 818
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 99/172 (57%), Gaps = 12/172 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP++ L+ +G RA+++ PTRELA+QT+ L
Sbjct: 73 GQDVVGMARTGSGKTAAFVIPMLEKLKSHSAKVGIRALVMSPTRELAEQTFKFIKELGRR 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
LR +I ++FG A DV++ TP + ++LL +M+ L+L VE+++ DE
Sbjct: 133 TDLRVALILGGDNMDDQFGWMHANP-DVIVATPGRFLHLLVEME---LSLKAVEYVVFDE 188
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKR 217
+D+LFE +GF + L I P ++ +FSAT + + ++ R LK+
Sbjct: 189 ADQLFE---KGFEEHLKEILMRL--PEDRQTLLFSATLPKKLIEFARAGLKQ 235
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 14/185 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P I H+L PK N G +I+ PTREL Q NE +L
Sbjct: 382 GRDVIGIAETGSGKTLAFLLPAIRHALDQPKLRENDGMIVLIIAPTRELIMQISNECSKL 441
Query: 105 SEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQM-DPPALNLANVEW 161
S+ +GL+ + E+ R A+ ++ TP +L+ +L + + NL V +
Sbjct: 442 SKSVGLKTLCVYGGAGIGEQLNALKRGAE---IVCGTPGRLIDVLTISNGKVTNLRRVTF 498
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++F+ GF Q+ I P+ + +FSAT + ++ L + +QI
Sbjct: 499 LVLDEADRMFDM---GFSPQITAIVENIR-PDRQTALFSATFPTSIENLAKKILSKPLQI 554
Query: 222 NVGLR 226
VG R
Sbjct: 555 IVGQR 559
>gi|50838814|ref|NP_001002869.1| probable ATP-dependent RNA helicase DDX27 [Danio rerio]
gi|49618925|gb|AAT68047.1| DEAD box polypeptide 27 [Danio rerio]
Length = 776
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 30/189 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q + +L+
Sbjct: 237 LGKDICACAATGTGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLA 296
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL L++ Q+AA + GP DVLI TP +L+ L + P+
Sbjct: 297 QFTTISTCLAVGGLDLKS------QEAALRAGP------DVLIATPGRLIDHLH-NTPSF 343
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
L+ +E LI+DE+D++ + F +Q+ I C+ + +FSAT +E+V
Sbjct: 344 ELSQIEILILDEADRMLD---EYFEEQMKEIIRMCAYQR-QTMLFSATMSEEVKDLASVS 399
Query: 215 LKRRVQINV 223
LK+ V+I V
Sbjct: 400 LKQPVRIFV 408
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + ++L G AVI+ PTRELA Q E +
Sbjct: 409 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF 468
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 469 SKTLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 523
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 524 TYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKPI 579
Query: 220 QINVGLR 226
++ VG R
Sbjct: 580 EVQVGGR 586
>gi|402700606|ref|ZP_10848585.1| DEAD/DEAH box helicase [Pseudomonas fragi A22]
Length = 448
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 99/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + +A+I+
Sbjct: 18 LKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKALIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
L L Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 L--LEQLNAGNLDLKEVEVLVLDEADRMLDM---GFSEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 100/187 (53%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + ++L G AVI+ PTRELA Q E +
Sbjct: 407 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF 466
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 467 SKTLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 521
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 522 TYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKPI 577
Query: 220 QINVGLR 226
++ VG R
Sbjct: 578 EVQVGGR 584
>gi|401426831|ref|XP_003877899.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494146|emb|CBZ29443.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 584
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 21/167 (12%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT AFL+P+ L+ P + RA+IV PT ELA+Q E L +
Sbjct: 179 RDVLACAPTGSGKTIAFLVPLFALLKTPDSSCSVRALIVTPTAELAQQIEREAFFLMK-- 236
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R + Q K D+ I TP ++V LL+ L+L+NV++L+ DE D
Sbjct: 237 GQRWKFVQHGQTTKNK---------DIFIATPGRIVSLLEQ--KLLDLSNVQYLVFDEGD 285
Query: 169 KLFEAGVRGFRDQLAV---IYAACSGPNLKRGMFSATHTEDVAKWCR 212
+L+++ D LAV I AC+ + +F+AT +E V R
Sbjct: 286 RLWDSRT----DFLAVIDRILTACTRTDKVVSLFTATLSEKVEAAAR 328
>gi|171690518|ref|XP_001910184.1| hypothetical protein [Podospora anserina S mat+]
gi|170945207|emb|CAP71318.1| unnamed protein product [Podospora anserina S mat+]
Length = 924
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 102/171 (59%), Gaps = 14/171 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAF+IP+I L+G PK +G RA+I+ P+RELA QT L G
Sbjct: 126 RDVVGMARTGSGKTAAFVIPMIERLKGHSPK-VGARALILSPSRELALQTLKVVKELGRG 184
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ E+F + A D++I TP + ++L ++M+ LNL+++++++ DE
Sbjct: 185 TDLKTILLVGGDSLEEQFA-QMATNPDIVIATPGRFLHLKVEMN---LNLSSIKYVVFDE 240
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+D+LFE GF +QL I A P+ ++ +FSAT + ++ R L+
Sbjct: 241 ADRLFEM---GFAEQLTEILHAL--PSSRQTLLFSATLPSSLVEFARAGLQ 286
>gi|330947853|ref|XP_003306985.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
gi|311315219|gb|EFQ84923.1| hypothetical protein PTT_20304 [Pyrenophora teres f. teres 0-1]
Length = 893
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF+IP+I L+ +G R +I+ P+RELA QT L G
Sbjct: 114 GEDVVGMARTGSGKTAAFVIPMIQKLKAHSAKVGARGIIMSPSRELALQTLKVVKELGRG 173
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ E+F + D++I TP + ++L ++M L+L++V +++ DE
Sbjct: 174 TDLRTILLVGGDSLEEQFSSMTTNP-DIIIATPGRFLHLKVEM---GLDLSSVRYIVFDE 229
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL+ I A + +FSAT + + ++ R L+
Sbjct: 230 ADRLFEM---GFAAQLSEILHALPASR-QTLLFSATLPKSLVEFARAGLQ 275
>gi|189189808|ref|XP_001931243.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972849|gb|EDU40348.1| ATP-dependent RNA helicase DBP10 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 892
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/170 (34%), Positives = 93/170 (54%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF+IP+I L+ +G R +I+ P+RELA QT L G
Sbjct: 114 GEDVVGMARTGSGKTAAFVIPMIQKLKAHSAKVGARGIIMSPSRELALQTLKVVKELGRG 173
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ E+F + D++I TP + ++L ++M L+L++V +++ DE
Sbjct: 174 TDLRTILLVGGDSLEEQFSSMTTNP-DIIIATPGRFLHLKVEM---GLDLSSVRYIVFDE 229
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL+ I A + +FSAT + + ++ R L+
Sbjct: 230 ADRLFEM---GFAAQLSEILHALPASR-QTLLFSATLPKSLVEFARAGLQ 275
>gi|409083507|gb|EKM83864.1| hypothetical protein AGABI1DRAFT_117335, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 701
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 14/180 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP+I L +G K R +++ PTRELA Q Y +
Sbjct: 230 LGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGKKAAAIRCLVLVPTRELAVQCYEVGTK 289
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
LS +R V+G + +++ RS + D++I TP +L+ ++ + + +L ++ L
Sbjct: 290 LSIHTDIRLCLVVGGLSLKSQEADLRS--RPDIVIATPGRLIDHIR-NSASFSLDALDIL 346
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+L I +C P ++ M FSAT T+ V + R L++ V++
Sbjct: 347 VIDEADRILS---EGFSDELTEIIKSC--PRSRQTMLFSATMTDSVDELVRVSLEKPVRL 401
>gi|398873687|ref|ZP_10628940.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
gi|398198842|gb|EJM85794.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
Length = 446
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + RS D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRSG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLTIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|410931566|ref|XP_003979166.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like, partial
[Takifugu rubripes]
Length = 697
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 30/190 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LGR + ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q + T +L+
Sbjct: 219 LGRDLCACAATGTGKTAAFVLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHAVTRQLA 278
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL L++ Q+ A + GP DVLI TP +L+ L + P+
Sbjct: 279 QFTSITTCLAVGGLDLKS------QEVALRAGP------DVLIATPGRLIDHLH-NTPSF 325
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
L+++E LI+DE+D++ + F +Q+ I CS N + +FSAT +E+V
Sbjct: 326 ELSHIEILILDEADRMLD---EYFEEQMKEIIRLCSY-NRQTMLFSATMSEEVKDLAAVS 381
Query: 215 LKRRVQINVG 224
LK+ V+I V
Sbjct: 382 LKQPVRIFVN 391
>gi|146415030|ref|XP_001483485.1| hypothetical protein PGUG_04214 [Meyerozyma guilliermondii ATCC
6260]
Length = 914
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 93/157 (59%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
R + A TGSGKTAAF++P++ L+ PK +G RAVI+ P RELA QT+ + ++
Sbjct: 136 SRDVVGMARTGSGKTAAFVLPVVEKLKSHSPK-VGVRAVILSPLRELALQTFKQVKEFTK 194
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVD 165
G LR+ V+ ++F D+L+ TP + ++L ++M+ L+L VE+++ D
Sbjct: 195 GTDLRSIVLIGGDSLEDQFLSMMTNP-DILVATPGRFLHLKVEMN---LDLKTVEYIVFD 250
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
E+D+LFE GF +QL + A P+ + +FSAT
Sbjct: 251 EADRLFEM---GFAEQLNELLVALP-PSRQSLLFSAT 283
>gi|281208721|gb|EFA82896.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 803
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 100/172 (58%), Gaps = 10/172 (5%)
Query: 55 CAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRA 112
CA TGSGKTAAFL+PI+ L R N R +++ PTRELA Q + L++ + +
Sbjct: 218 CATTGSGKTAAFLLPILERLLYRDVDNRAIRVLVLLPTRELALQCQSVLENLAQFTNITS 277
Query: 113 -HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLF 171
V+G + ++ R ++ DV+I TP +L+ L ++ + L ++E L++DE+D+L
Sbjct: 278 CLVVGGLSNKVQEVELR--KRPDVVIATPGRLIDHL-LNAHDVGLDDLEILVLDEADRLL 334
Query: 172 EAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+ GF+D+L I +C N + +FSAT +++V + LK+ +++ V
Sbjct: 335 DM---GFKDELEKIVESCPA-NRQSLLFSATLSDEVKTLAKLSLKQPIRVAV 382
>gi|126134609|ref|XP_001383829.1| ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family
[Scheffersomyces stipitis CBS 6054]
gi|146286101|sp|A3LRW2.1|DBP3_PICST RecName: Full=ATP-dependent RNA helicase DBP3
gi|126095978|gb|ABN65800.1| ATP-dependent RNA helicase CA3 of the DEAD/DEAH box family
[Scheffersomyces stipitis CBS 6054]
Length = 526
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF +P I+++ G + + PTRELA Q Y+ V L+
Sbjct: 153 GKDVIGVAETGSGKTFAFGVPAINNILTLGKSGLSVLCISPTRELASQIYDNLVDLTSNT 212
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
++ V G + + + ++A +V++ TP +L+ L++ A+NL V++L++DE+
Sbjct: 213 NVKCVCVYGGVPKHDQVKNLKNA---NVVVATPGRLLDLIE--DGAVNLGTVDYLVLDEA 267
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E GF D + I N + MF+AT ++V K + + V++++G R
Sbjct: 268 DRMLET---GFEDAIKAIIGGTKKENRQTLMFTATWPQEVRKLASTFMNQPVKVSIGDR 323
>gi|50405707|ref|XP_456492.1| DEHA2A03454p [Debaryomyces hansenii CBS767]
gi|74659594|sp|Q6BZ77.1|DBP3_DEBHA RecName: Full=ATP-dependent RNA helicase DBP3
gi|49652156|emb|CAG84444.1| DEHA2A03454p [Debaryomyces hansenii CBS767]
Length = 527
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF +P I+++ G + + + PTRELA Q Y+ V L+
Sbjct: 154 GKDVIGVAETGSGKTFAFGVPAINNILTHDKKGLKVLCISPTRELALQIYDNLVDLTANT 213
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L+ V G + + + R+A V++ TP +L+ LL + AL+L ++E+L++DE+
Sbjct: 214 PLKCVAVYGGVSKHEQVSSLRNAS---VVVATPGRLIDLL--NDGALSLDSIEYLVLDEA 268
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + + N + MF+AT ++V + + V++++G R
Sbjct: 269 DRMLE---KGFEQDIKSVMQQTNHANRQTLMFTATWPKEVRELASTFMNSPVKVSIGDR 324
>gi|424925048|ref|ZP_18348409.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
gi|404306208|gb|EJZ60170.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
Length = 446
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVAANSARALILVPTRELAEQVHESVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R DVL+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDVLVATPGRLIDLFRQN--ALKLDQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 11/184 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKT AFL+P+ ++ + + G +I+ PTRELA Q Y E
Sbjct: 514 GRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVETSEGPVGIIMTPTRELAVQIYREMRPF 573
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEWLI 163
LGLRA + +E+ + D+++ TP +++ LL + + NL V +L+
Sbjct: 574 IRALGLRAACVYGGAPISEQIA-EMKKTADIVVATPGRMIDLLTANSGRVTNLRRVTYLV 632
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR-VQIN 222
+DE+D++F+ GF Q+ I P+ + +FSAT + + R+ LK + ++I
Sbjct: 633 LDEADRMFDM---GFEPQVMRIVNNIR-PDRQTVLFSATFPKQMESLARKVLKNKPLEIT 688
Query: 223 VGLR 226
VG R
Sbjct: 689 VGGR 692
>gi|339250128|ref|XP_003374049.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316969700|gb|EFV53757.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 693
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 32/188 (17%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
LG+ I ACA TG+GKT A++IPI+ L K +G R +++ PTRELA Q Y L
Sbjct: 188 LGKDICACAATGTGKTCAYMIPILERLLF-KPVGRRITRVLVMVPTRELAMQVYETGTTL 246
Query: 105 SE-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPA 153
++ G+ L++ Q+AA + P DV+I TP +L+ L + P
Sbjct: 247 AKYTSISIALSTGGMDLKS------QEAALRLNP------DVVIATPGRLIDHLH-NSPG 293
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
NL VE L++DE+D++ + F +Q+ I CS P + +FSAT T+ V
Sbjct: 294 FNLNGVEILVLDEADRMLD---EHFEEQMLEIMRLCS-PTRQAMLFSATMTDKVKDLASV 349
Query: 214 KLKRRVQI 221
LK+ V++
Sbjct: 350 SLKKPVKL 357
>gi|428167084|gb|EKX36049.1| hypothetical protein GUITHDRAFT_165849 [Guillardia theta CCMP2712]
Length = 312
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 98/179 (54%), Gaps = 13/179 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKT +F +PII + L+ P + AV++ PTRELA Q L +G
Sbjct: 50 GRDLIALAKTGSGKTGSFALPIIEALLKNPAP--YFAVVISPTRELASQIEEHFQALGKG 107
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+GL+ VIG I + + A+ V++ TP +L+Y+LQ + +L N+++L++DE
Sbjct: 108 IGLKTVSVIGGIDEVTQM--RMLAKTPHVIVGTPGRLLYMLQ-NMKGFSLRNIKYLVLDE 164
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D+L DQ+ + P ++ +FSAT T V K R L+ +++ V
Sbjct: 165 ADRLLHEDFEKQLDQILEVL-----PRERQTFLFSATMTSKVQKLQRASLRDPIKVEVA 218
>gi|302695203|ref|XP_003037280.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
gi|300110977|gb|EFJ02378.1| hypothetical protein SCHCODRAFT_73122 [Schizophyllum commune H4-8]
Length = 771
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 101/186 (54%), Gaps = 22/186 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF IP++ L +G K R +++ PTRELA Q Y +
Sbjct: 215 LGKDVVGNAVTGSGKTAAFTIPMLERLLYREKGKKAAATRCLVLVPTRELAVQCYEVGKK 274
Query: 104 LSEGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ + A ++G K Q+A + P D++I TP +L+ + + P+ L N
Sbjct: 275 LAAHTDIEVALIVGGLSLKSQEATLRARP------DIVIATPGRLIDHIH-NSPSFTLDN 327
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ L++DE+D++ GF D+L I AC P ++ M FSAT T+ V + R L +
Sbjct: 328 LDVLVLDEADRMLSD---GFADELTEIIKAC--PKSRQTMLFSATMTDSVDELVRMSLDK 382
Query: 218 RVQINV 223
V++ V
Sbjct: 383 PVRLFV 388
>gi|383455859|ref|YP_005369848.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
gi|380734128|gb|AFE10130.1| ATP-dependent RNA helicase [Corallococcus coralloides DSM 2259]
Length = 424
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 13/177 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + CA TG+GKTAA+L+P+I G K G R +I+ PTRELA+Q + E L
Sbjct: 40 GRDVIGCAATGTGKTAAYLLPMIERFAGEK--GTRGLILTPTRELAQQVEEQARFFGEPL 97
Query: 109 G-LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G L ++G A+ R ++ +++ TP +LV LL + A+NL ++ L++DE+
Sbjct: 98 GVLPVLIVGGEDMNAQVDALR--ERPSLIVATPGRLVDLLGVK--AVNLHRIQTLVLDEA 153
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
D++ + GF Q+ I A P ++ +FSAT DV ++ +R L + V++ V
Sbjct: 154 DRMLDM---GFLPQINQILHAL--PRERQTLLFSATLGADVTRFGQRALHKPVRVEV 205
>gi|361128136|gb|EHL00089.1| putative ATP-dependent RNA helicase dbp3 [Glarea lozoyensis 74030]
Length = 526
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 14/188 (7%)
Query: 41 TITYLSPLGRQIFACAPTGSGKTAAFLIPI---IHSLRGPKNLGFRAVIVCPTRELAKQT 97
T YLS GR + A TGSGKT AF +P I SL G KN G RAVI+ PTRELA Q+
Sbjct: 142 TWPYLS-AGRDLIGVAETGSGKTMAFAVPCARHILSLPGGKNKGPRAVIISPTRELAMQS 200
Query: 98 YNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
Y + + L++ GL+A V G + + ++ R+A D+++ TP +L L+ + +L
Sbjct: 201 YEQVMLLAKVSGLQAVCVYGGVPKDEQRRALRTA---DIVVATPGRLNDLI--NEGCADL 255
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+ +++++DE+D++ + +GF +++ I S + MF+AT E V +K
Sbjct: 256 SKAKYVVLDEADRMLD---KGFEEEIRKIINTTS-TERQTLMFTATWPESVRALASTFMK 311
Query: 217 RRVQINVG 224
++I +G
Sbjct: 312 TPLRITIG 319
>gi|323355122|gb|EGA86952.1| Dbp3p [Saccharomyces cerevisiae VL3]
Length = 537
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQ--EGSVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|343427053|emb|CBQ70581.1| related to RNA helicase [Sporisorium reilianum SRZ2]
Length = 1155
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 11/184 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKT AFL+P+ ++ + + G +++ PTRELA Q Y E
Sbjct: 516 GRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEVGEGPVGIVMTPTRELAVQIYREMRPF 575
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEWLI 163
+ LGLRA + +E+ + D+++ TP +L+ LL + + NL V +L+
Sbjct: 576 IKALGLRAACVYGGAPISEQIA-EMKKTADIVVATPGRLIDLLTANSGRVTNLRRVTYLV 634
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR-VQIN 222
+DE+D++F+ GF Q+ I P+ + +FSAT + + R+ LK + ++I
Sbjct: 635 LDEADRMFDM---GFEPQVMKIVNNIR-PDRQTVLFSATFPKQMESLARKVLKNKPLEIT 690
Query: 223 VGLR 226
VG R
Sbjct: 691 VGGR 694
>gi|330840963|ref|XP_003292476.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
gi|325077283|gb|EGC31006.1| hypothetical protein DICPUDRAFT_157190 [Dictyostelium purpureum]
Length = 780
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 104/179 (58%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ I A A TGSGKTAAFL+PI+ L R + R +++ PTRELA Q + L++
Sbjct: 219 GKDILASASTGSGKTAAFLLPILERLLFRDSEYRAIRVLVLLPTRELALQCQSVLENLAQ 278
Query: 107 GLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ + ++G + A++ R ++ DV+I TP +L+ L ++ + L ++E LI+D
Sbjct: 279 FSNITSCLIVGGLSNKAQEVELR--KRPDVVIATPGRLIDHL-LNAHGIGLEDLEILILD 335
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
E+D+L + GF+D++ I +C P ++ M FSAT ++V + L++ +++ V
Sbjct: 336 EADRLLDM---GFKDEINKIVDSC--PTSRQTMLFSATLNDEVKTLAKLSLQQPIRVQV 389
>gi|118351203|ref|XP_001008880.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89290647|gb|EAR88635.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 643
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 99/180 (55%), Gaps = 15/180 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A + TGSGKTAAFLIPI+ R P +A+IV PTRELA Q Y +L++
Sbjct: 227 GKDLLASSLTGSGKTAAFLIPILQKFYRSPFTNYSKALIVTPTRELAFQIYEVFTKLNKY 286
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LRA VIG Q A +K +V+I TP +L+ LQ + +++L N+E LI DE
Sbjct: 287 TKLRACLVIG--QSAMQKQEAELRGNPEVIIATPGRLIDHLQ-NSRSIDLDNLEVLIFDE 343
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKR--RVQIN 222
+DKL + GF I C N +R +FSAT T +V K L++ R+Q N
Sbjct: 344 ADKLLDL---GFEAAAQNIVENC---NRERQTLLFSATLTSEVNKLIDIALRKPIRIQAN 397
>gi|421486785|ref|ZP_15934320.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
gi|400194954|gb|EJO27955.1| ATP-dependent RNA helicase [Achromobacter piechaudii HLE]
Length = 497
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANASASPARHPVRALILTPTRELADQVYESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 170 ILVLDEADRMLDM---GFLPDLERIIRLL--PTQRQGLLFSATFSNEIRKLGRSYLNHPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|114776507|ref|ZP_01451552.1| Superfamily II DNA and RNA helicase [Mariprofundus ferrooxydans
PV-1]
gi|114553337|gb|EAU55735.1| Superfamily II DNA and RNA helicase [Mariprofundus ferrooxydans
PV-1]
Length = 414
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 106/202 (52%), Gaps = 28/202 (13%)
Query: 40 FTITYLSPL------------GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG--FRA 84
T+TY P GR + A A TG+GKTA F +P++H L +GP+ RA
Sbjct: 16 ITVTYTKPTPVQLESIPAILKGRDVMAAAQTGTGKTAGFTLPMLHLLAQGPRVRANQVRA 75
Query: 85 VIVCPTRELAKQTYNETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKL 143
+I+ PTRELA Q + VR L LR+ V+ G ++ + R D+L+ TP +L
Sbjct: 76 LILVPTRELAGQVGDSVVRYGVRLPLRSAVVFGGVKINPQMMKLRKG--VDILVATPGRL 133
Query: 144 VYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSA 201
+ L Q + A+ +E L++DE+D++ + GF D+L I A +KR MFSA
Sbjct: 134 LDLHQQN--AVRFNQLEILVLDEADRMLDM---GFMDELKKILALLP---VKRQNLMFSA 185
Query: 202 THTEDVAKWCRRKLKRRVQINV 223
T+++++ + + V+I V
Sbjct: 186 TYSDEIRALAKTIVHHPVEICV 207
>gi|332284754|ref|YP_004416665.1| ATP-dependent RNA helicase DbpA [Pusillimonas sp. T7-7]
gi|330428707|gb|AEC20041.1| ATP-dependent RNA helicase DbpA [Pusillimonas sp. T7-7]
Length = 444
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 99/181 (54%), Gaps = 19/181 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A A TGSGKTAAF + I+H L P +A+++CPTREL++Q NE RL+ +
Sbjct: 23 GQDLIAQAKTGSGKTAAFGLGIVHKL-DPGAYNIQALVLCPTRELSEQVANELRRLARAI 81
Query: 109 G------LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
G L + Q + KFG +++ TP +L+ ++ D ++ + + L
Sbjct: 82 GNIKVITLCGGTPIRPQIESLKFGAH------IVVGTPGRLMDHIERD--TVDFSGLHTL 133
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ + GF D + I +C G + +FSAT+ +D+ K R L++ ++
Sbjct: 134 VLDEADRMLDM---GFYDDVTKIVGSCPGTRQTQ-LFSATYADDIRKASARFLRKPKEVK 189
Query: 223 V 223
V
Sbjct: 190 V 190
>gi|398364607|ref|NP_011437.3| RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|1708151|sp|P20447.2|DBP3_YEAST RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|172582|gb|AAA73137.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1322595|emb|CAA96783.1| DBP3 [Saccharomyces cerevisiae]
gi|285812127|tpg|DAA08027.1| TPA: RNA-dependent ATPase DBP3 [Saccharomyces cerevisiae S288c]
gi|392299185|gb|EIW10279.1| Dbp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 523
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQ--EGSVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|348544540|ref|XP_003459739.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Oreochromis
niloticus]
Length = 736
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 30/190 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ + ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++ +L+
Sbjct: 202 LGKDLCACAATGTGKTAAFMLPVLERLVYKPRTSQVTRVLVLVPTRELGIQVHSVARQLA 261
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL L++ Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 262 QFTSITTCLAVGGLDLKS------QEAALRAGP------DILIATPGRLIDHLH-NTPSF 308
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
L ++E LI+DE+D++ + F +Q+ I CS N + +FSAT TE+V
Sbjct: 309 ELTHIEILILDEADRMLDE---YFEEQMKEIIRLCSY-NRQTMLFSATMTEEVKDLAAVS 364
Query: 215 LKRRVQINVG 224
LK+ V+I V
Sbjct: 365 LKQPVRIFVN 374
>gi|256269719|gb|EEU04989.1| Dbp3p [Saccharomyces cerevisiae JAY291]
Length = 523
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|365990195|ref|XP_003671927.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
gi|343770701|emb|CCD26684.1| hypothetical protein NDAI_0I01150 [Naumovozyma dairenensis CBS 421]
Length = 523
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 104/186 (55%), Gaps = 16/186 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL------RGPKNLG-FRAVIVCPTRELAKQTYNET 101
G+ + A TGSGKT AF +P I L KN G + +++ PTRELA Q Y+
Sbjct: 143 GKDVIGVAETGSGKTFAFGVPAIDYLVKTNQSNNKKNSGGIQVLVISPTRELASQIYDNL 202
Query: 102 VRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ L+E +GL+ V G + + A++ + +Q V++ TP +L+ L+Q ++NL+ V+
Sbjct: 203 IILTEKVGLQCCCVYGGVPKEAQRIQLKKSQ---VVVATPGRLLDLIQEG--SVNLSAVK 257
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
+L++DE+D++ E +GF + + I S + MF+AT ++V + + V+
Sbjct: 258 YLVLDEADRMLE---KGFEEDIKNIIRETSPKGRQTLMFTATWPKEVRELASSFMNEPVK 314
Query: 221 INVGLR 226
+++G R
Sbjct: 315 VSIGNR 320
>gi|323333679|gb|EGA75072.1| Dbp3p [Saccharomyces cerevisiae AWRI796]
Length = 368
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|160380616|sp|A6ZUA1.1|DBP3_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP3; AltName: Full=DEAD
box protein 3; AltName: Full=Helicase CA3
gi|151943729|gb|EDN62039.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 523
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|323309067|gb|EGA62295.1| Dbp3p [Saccharomyces cerevisiae FostersO]
Length = 368
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|303249337|ref|ZP_07335567.1| DEAD/DEAH box helicase domain protein [Desulfovibrio fructosovorans
JJ]
gi|302489269|gb|EFL49229.1| DEAD/DEAH box helicase domain protein [Desulfovibrio fructosovorans
JJ]
Length = 498
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR I A TG+GKTAAFL+PIIH L P+ G RA+I+ PTRELA+Q Y V L
Sbjct: 58 GRDIMGLAQTGTGKTAAFLLPIIHRLMTTKPEKRGVRALILAPTRELAEQIYRAGVDLGR 117
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
G LRA VI G + + R Q D+++ P +L L M+ + +E L++D
Sbjct: 118 GTRLRAAVIYGGVGMFPQVRALR--QGLDIVVACPGRL--LDHMNQGNVRFDALETLVLD 173
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D +F+ GF L I AA P ++ +FSAT +A L V + +G
Sbjct: 174 EADHMFDM---GFLPDLRRILAAV--PEKRQTLLFSATMPAAIAGLAGETLTDPVTVRIG 228
>gi|190407035|gb|EDV10302.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|207345345|gb|EDZ72198.1| YGL078Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146428|emb|CAY79685.1| Dbp3p [Saccharomyces cerevisiae EC1118]
gi|365765558|gb|EHN07065.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 523
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|405968650|gb|EKC33699.1| ATP-dependent RNA helicase DDX54 [Crassostrea gigas]
Length = 472
Score = 87.0 bits (214), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 83 GKDVVAMARTGSGKTAAFLIPMFEKLKTHTAKSGARGLILSPTRELALQTLKFTKELGKY 142
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
GLRA V+ + ++F + D++I TP +L++ L++M+ L +VE+++ DE
Sbjct: 143 TGLRAAVVLGGDKMDDQFAALH-ENPDIIIATPGRLMHVLVEMEK---KLKSVEYVVFDE 198
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF++QL I
Sbjct: 199 ADRLFEM---GFQEQLHEI 214
>gi|408479143|ref|ZP_11185362.1| ATP-dependent RNA helicase [Pseudomonas sp. R81]
Length = 444
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFAVPLLQLLTMEGPKVAANSARALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R D+L+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQNLPLTTYAVYGGVSINPQMMKLRKG--VDILVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|349578148|dbj|GAA23314.1| K7_Dbp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 523
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>gi|426201453|gb|EKV51376.1| hypothetical protein AGABI2DRAFT_114110 [Agaricus bisporus var.
bisporus H97]
Length = 754
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 14/180 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ + A TGSGKTAAF+IP+I L +G K R +++ PTRELA Q Y +
Sbjct: 230 LGKDVVGNAVTGSGKTAAFMIPMIERLLFREKGKKAAAIRCLVLVPTRELAVQCYEVGTK 289
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
LS +R V+G + +++ RS + D++I TP +L+ ++ + + +L ++ L
Sbjct: 290 LSIHTDIRLCLVVGGLSLKSQEADLRS--RPDIVIATPGRLIDHIR-NSASFSLDALDIL 346
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+L I +C P ++ M FSAT T+ V + R L++ V++
Sbjct: 347 VIDEADRILS---EGFSDELTEIIKSC--PRSRQTMLFSATMTDSVDELVRVSLEKPVRL 401
>gi|187479233|ref|YP_787258.1| ATP-dependent RNA helicase [Bordetella avium 197N]
gi|115423820|emb|CAJ50371.1| putative ATP-dependent RNA helicase [Bordetella avium 197N]
Length = 477
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 52 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANSSASPARHPVRALILTPTRELADQVYENV 111
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S LR+ V+ G + +K R Q +VL+ TP +L L ++ +NL+ V
Sbjct: 112 KRYSLHTPLRSAVVFGGVDIGPQKEALR--QGCEVLVATPGRL--LDHVEQKNVNLSQVG 167
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L + V
Sbjct: 168 ILVLDEADRMLDM---GFLPDLERIIRLL--PPQRQGLLFSATFSNEIRKLGRSYLNQPV 222
Query: 220 QINVGLR 226
+I V R
Sbjct: 223 EIEVAAR 229
>gi|407926601|gb|EKG19568.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 913
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT L G
Sbjct: 126 GQDVVGMARTGSGKTAAFVIPMIERLKAHSAKVGARAIIMSPSRELALQTLKVVKELGRG 185
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ ++F ++ D++I TP + ++L ++M+ L+L+ V +++ DE
Sbjct: 186 TDLRTVLLVGGDSLEDQFADMNSNP-DIIIATPGRFLHLKVEME---LDLSTVRYVVFDE 241
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL I A PN + +FSAT + + ++ R L+
Sbjct: 242 ADRLFEM---GFAAQLTEILHALP-PNRQTLLFSATLPKSLVEFARAGLQ 287
>gi|406604990|emb|CCH43589.1| hypothetical protein BN7_3142 [Wickerhamomyces ciferrii]
Length = 958
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R I A TGSGKTAAF +P++ L+ +G RA+++ P+RELA QTY S G
Sbjct: 152 NRDIVGMARTGSGKTAAFSLPLVERLKIHSAKVGARAIVLSPSRELAIQTYKVIKEFSRG 211
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ ++ ++F + D++I TP + ++L ++M L+L VE+++ DE
Sbjct: 212 TDLRSVLLIGGDSLEDQFSLMMSNP-DIVIATPGRFLHLKVEM---QLDLKTVEYVVFDE 267
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL + +A PN + +FSAT
Sbjct: 268 ADRLFEM---GFEEQLNELLSALP-PNRQSLLFSAT 299
>gi|326932134|ref|XP_003212175.1| PREDICTED: hypothetical protein LOC100549747 [Meleagris gallopavo]
Length = 1561
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 105/181 (58%), Gaps = 18/181 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 1019 LGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 1078
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + + +G K Q+AA + GP D+LI TP +L+ L + P+ +L++VE
Sbjct: 1079 QFSSVTSCLAVGGLDVKTQEAALRSGP------DILIATPGRLIDHLH-NCPSFHLSSVE 1131
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V LK +
Sbjct: 1132 VLILDEADRMLD---EYFEEQMKEIIRLCSK-HRQTMLFSATMTEEVKDLASVSLKNPTR 1187
Query: 221 I 221
I
Sbjct: 1188 I 1188
>gi|395499060|ref|ZP_10430639.1| putative ATP-dependent RNA helicase [Pseudomonas sp. PAMC 25886]
Length = 443
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPK--NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFAVPLLQLLTMEGPKVSANSVRALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R DVL+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQNLPLTTYAVYGGVSINPQMMKLRKG--VDVLVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++++ + + L + +
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDEIRQLAGQMLNDPLTVE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|358384615|gb|EHK22212.1| hypothetical protein TRIVIDRAFT_209061 [Trichoderma virens Gv29-8]
Length = 897
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT L G
Sbjct: 125 KDVVGMARTGSGKTAAFVIPMIEKLRAHSSKFGSRALILSPSRELAIQTLKVVKELGRGT 184
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ ++ E+FG SA D++I TP + ++L ++M L+L+++++++ DE+
Sbjct: 185 DLKSVLLVGGDSLEEQFGFMSANP-DIVIATPGRFLHLKVEM---GLDLSSIKYVVFDEA 240
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 241 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPASLVEFARAGLQ 285
>gi|358055869|dbj|GAA98214.1| hypothetical protein E5Q_04897 [Mixia osmundae IAM 14324]
Length = 835
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 103/190 (54%), Gaps = 32/190 (16%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+G+ I A + TGSGKT AF + ++ L R K+ R +++CPTRELA Q ++ L+
Sbjct: 304 MGKDIVASSNTGSGKTVAFWLGVLERLLYRDKKDARTRVLVICPTRELAVQVHSVGKALA 363
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
GL L K+Q+A + Q+ DV+++TP +L+ ++ +
Sbjct: 364 RYTDISFCLCVGGLSL------KVQEAELR------QRPDVVVSTPGRLIDHVR-NTSTF 410
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRR 213
L ++E LI+DE+D++ E GFRD+L I C P ++ +FSAT TEDV + R
Sbjct: 411 TLDSLEILIIDEADRILE---EGFRDELTEIIKEC--PRSRQSLLFSATITEDVNELARL 465
Query: 214 KLKRRVQINV 223
L + V+I +
Sbjct: 466 SLDKPVRIKI 475
>gi|422661603|ref|ZP_16723858.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330982735|gb|EGH80838.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 170
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 15/133 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E R S+
Sbjct: 45 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQ 104
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L L Q++ L+L +VE
Sbjct: 105 FTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLKHVEV 156
Query: 162 LIVDESDKLFEAG 174
L++DE+D++ + G
Sbjct: 157 LVLDEADRMLDMG 169
>gi|395647109|ref|ZP_10434959.1| putative ATP-dependent RNA helicase [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 444
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTAAF +P++ ++ GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAAFAVPLLQLLTMEGPKVAANSARALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R + D+L+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQHLPLTTYAVYGGVSINPQMM--RLRKGVDILVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++++ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDEIRTLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|423015941|ref|ZP_17006662.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
gi|338781000|gb|EGP45396.1| putative ATP-dependent RNA helicase [Achromobacter xylosoxidans
AXX-A]
Length = 457
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 26 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 85
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 86 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 141
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L + V
Sbjct: 142 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNQPV 196
Query: 220 QINVGLR 226
+I V R
Sbjct: 197 EIEVAAR 203
>gi|422322840|ref|ZP_16403880.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
gi|317402151|gb|EFV82742.1| ATP-dependent RNA helicase [Achromobacter xylosoxidans C54]
Length = 481
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 55 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 114
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 115 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 170
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 171 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNHPV 225
Query: 220 QINVGLR 226
+I V R
Sbjct: 226 EIEVAAR 232
>gi|422635168|ref|ZP_16699778.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae Cit
7]
gi|330955887|gb|EGH56147.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae Cit 7]
Length = 136
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 15/133 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E R S+
Sbjct: 12 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVILLPTRELAQQTLKEVERFSQ 71
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++A +I K+Q A + P D+LI TP +L L Q++ L+L +VE
Sbjct: 72 FTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEQLNAGNLDLKHVEV 123
Query: 162 LIVDESDKLFEAG 174
L++DE+D++ + G
Sbjct: 124 LVLDEADRMLDMG 136
>gi|169608063|ref|XP_001797451.1| hypothetical protein SNOG_07098 [Phaeosphaeria nodorum SN15]
gi|160701550|gb|EAT85749.2| hypothetical protein SNOG_07098 [Phaeosphaeria nodorum SN15]
Length = 798
Score = 86.7 bits (213), Expect = 7e-15, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 12/171 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF+IP+I L+ +G R VI+ P+RELA QT G
Sbjct: 115 GDDVVGMARTGSGKTAAFVIPMIERLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGRG 174
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ E+F + D++I TP + ++L ++M L+L++V++++ DE
Sbjct: 175 TDLRTILLVGGDSLEEQFNSMTTNP-DIIIATPGRFLHLKVEM---GLDLSSVQYIVFDE 230
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+D+LFE GF QLA I A P ++ +FSAT + + ++ R L+
Sbjct: 231 ADRLFEM---GFAAQLAEILYAL--PTSRQTLLFSATLPKSLVEFARAGLQ 276
>gi|403216375|emb|CCK70872.1| hypothetical protein KNAG_0F02050 [Kazachstania naganishii CBS
8797]
Length = 533
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 103/181 (56%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P + H + K + G +A+I+ PTRELA Q Y+ + L++
Sbjct: 158 GKDVIGVAETGSGKTLAFGVPAVNHIIETSKTVSGIQALIISPTRELASQIYDNLIPLTD 217
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+GL V G + + ++ R K +++ TP +L+ LLQ ++NL+ V +L++D
Sbjct: 218 KVGLECCCVYGGVPKDEQRMKLR---KCHIVVATPGRLLDLLQEG--SVNLSKVNYLVLD 272
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + MF+AT ++V + + + V++++G
Sbjct: 273 EADRMLE---KGFEEDIKNIIRETAPHGRQTLMFTATWPKEVRELAATFMNQPVKVSIGN 329
Query: 226 R 226
R
Sbjct: 330 R 330
>gi|340521482|gb|EGR51716.1| predicted protein [Trichoderma reesei QM6a]
Length = 914
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT L G
Sbjct: 125 KDVVGMARTGSGKTAAFVIPMIERLRAHSSKFGSRALILSPSRELAIQTLKVVKELGRGT 184
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ ++ E+FG SA D++I TP + ++L ++M L+L+++++++ DE+
Sbjct: 185 DLKSVLLVGGDSLEEQFGFMSANP-DIVIATPGRFLHLKVEM---GLDLSSIKYVVFDEA 240
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 241 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPASLVEFARAGLQ 285
>gi|430811708|emb|CCJ30841.1| unnamed protein product [Pneumocystis jirovecii]
Length = 610
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 103/185 (55%), Gaps = 20/185 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I A TGSGKTAAF+IP++ L PK + R +I+CPTRELA Q YN T +L+
Sbjct: 207 LGKDIVGSAVTGSGKTAAFVIPVLERLLYRPKKIAVTRVLILCPTRELAIQCYNVTKKLA 266
Query: 106 EGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
++ + KIQ+A + P D++I TP + + ++ + + ++E
Sbjct: 267 TYTDIKTCICTGGLSLKIQEAELRKRP------DIVIATPGRFIDHVR-NSYGFSPNSIE 319
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
+++DE+D++ + GF+D+L I C P ++ +FSAT T+ V + R L + V
Sbjct: 320 IIVIDEADRILD---EGFQDELNEIIKIC--PKSRQTILFSATMTDKVDQLIRLSLNKPV 374
Query: 220 QINVG 224
++ V
Sbjct: 375 RLFVD 379
>gi|241999744|ref|XP_002434515.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215497845|gb|EEC07339.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 771
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTAAFL+PI+ L+ G RA+++ PTRELA QT+ L +
Sbjct: 55 GRDVVAMARTGSGKTAAFLVPILDKLKARSLQAGARALVLSPTRELALQTHKFAKELGKF 114
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L++ VI ++F + DVLI TP + +++ ++MD L L+++++++ DE
Sbjct: 115 TDLKSTVILGGDNMEDQFEA-IHENPDVLIATPGRFLHIVMEMD---LKLSSIKYVVFDE 170
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF++QL I N + +FSAT
Sbjct: 171 ADRLFEM---GFQEQLNEILHRLP-ENRQTLLFSAT 202
>gi|156845404|ref|XP_001645593.1| hypothetical protein Kpol_1033p40 [Vanderwaltozyma polyspora DSM
70294]
gi|160380615|sp|A7TJ36.1|DBP3_VANPO RecName: Full=ATP-dependent RNA helicase DBP3
gi|156116258|gb|EDO17735.1| hypothetical protein Kpol_1033p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 530
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
G+ + A TGSGKT AF +P I+++ P G + +I+ PTRELA Q Y+ V
Sbjct: 152 GKDVIGVAETGSGKTFAFGVPAINNILTKSGSKPGKNGIQVLIISPTRELASQIYDNLVI 211
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L++ +GL V G + + ++ + +Q V++ TP +L+ L+Q A NL+NV +L
Sbjct: 212 LTDKVGLECCCVYGGVPKDEQRTQLKRSQ---VVVATPGRLLDLIQ--EGAANLSNVNYL 266
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ E +GF + + I + MF+AT ++V + + ++++
Sbjct: 267 VLDEADRMLE---KGFEEDIKNIIRETKSTGRQTLMFTATWPKEVRELASTFMNSPIKVS 323
Query: 223 VG 224
+G
Sbjct: 324 IG 325
>gi|453081414|gb|EMF09463.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 849
Score = 86.3 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 12/171 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ G RA+I+ P+RELA QT + +G
Sbjct: 33 GQDVVGMARTGSGKTAAFVIPMIEKLKAHSAKFGARAMILSPSRELALQTLKVVKEMGKG 92
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR +I + FG +A D++I TP + ++ ++M L+L++V++++ DE
Sbjct: 93 TDLRTVLIVGGDGIEDNFGSMAANP-DIIIATPGRFEHVKVEM---GLDLSSVKYMVFDE 148
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL I S P ++ +FSAT + + ++ R L+
Sbjct: 149 ADRLFEM---GFAAQLMEIMH--SLPATRQTLLFSATLPKSLVEFARAGLQ 194
>gi|15030137|gb|AAH11321.1| Ddx27 protein [Mus musculus]
Length = 572
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 32 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 91
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 92 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 144
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+DK+ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 145 VLILDEADKMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 200
Query: 221 INVG 224
I V
Sbjct: 201 IFVN 204
>gi|330842567|ref|XP_003293247.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
gi|325076448|gb|EGC30233.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
Length = 551
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 21/185 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKTA F+ P I H + P K G A+ + PTRELA+Q Y ET++
Sbjct: 145 GRDLIAIAKTGSGKTATFIWPSIPHIMDQPYLEKGDGPIALFLAPTRELAQQIYLETLKY 204
Query: 105 SEGLGLRAHV----IGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
S+ LR V + K QQ E K G +++++TP +L+ ++++ LN V
Sbjct: 205 SKYFKLRTTVLYGGVSKQQQCKELKAG------CEIVVSTPGRLIDMIKLKATKLN--RV 256
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+DK+F+ GF Q+ I P+ + +FSAT ++V + R L +
Sbjct: 257 TYLVLDEADKMFDF---GFGPQVLSIVNHVR-PDRQTLLFSATFKQNVEDFARSILTDPI 312
Query: 220 QINVG 224
+I++G
Sbjct: 313 KISIG 317
>gi|153006338|ref|YP_001380663.1| DEAD/DEAH box helicase [Anaeromyxobacter sp. Fw109-5]
gi|152029911|gb|ABS27679.1| DEAD/DEAH box helicase domain protein [Anaeromyxobacter sp.
Fw109-5]
Length = 455
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 107/203 (52%), Gaps = 16/203 (7%)
Query: 25 LAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF 82
LA + + F+H P + P G+ + A TG+GKTAAFL+P+I L G G
Sbjct: 16 LAALRRAGFEHPTP-IQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDRLAG--KPGT 72
Query: 83 RAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPN 141
RA+++ PTRELA Q E R +R A +IG + A + R QK +++I TP
Sbjct: 73 RALVLAPTRELALQIGEELERFGHARRVRGAVIIGGVGMAQQAEALR--QKREIVIATPG 130
Query: 142 KLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFS 200
+LV L+ L+ +E L++DE+D++ + GF+ QL I P ++ +FS
Sbjct: 131 RLVDHLEQGNARLD--GIEALVLDEADRMLDM---GFKPQLDRILRRL--PKQRQTLLFS 183
Query: 201 ATHTEDVAKWCRRKLKRRVQINV 223
AT +VA + R L+ V++ V
Sbjct: 184 ATMAGEVADFARAHLRDPVRVEV 206
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 86.3 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 100/187 (53%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + + L G +VI+ PTRELA Q E +
Sbjct: 399 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKF 458
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 459 SKPLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLGANSGRVTNLRRV 513
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I + P+ + MFSAT + RR L + +
Sbjct: 514 TYMVLDEADRMFDM---GFEPQVMRIVDSVR-PDRQTVMFSATFPRAMEALARRILNKPI 569
Query: 220 QINVGLR 226
++ VG R
Sbjct: 570 EVQVGGR 576
>gi|76154760|gb|AAX26182.2| SJCHGC05440 protein [Schistosoma japonicum]
Length = 202
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 6/160 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ I A TGSGKTAAF IPI+ L F A+I+ PTRELA Q + L + G
Sbjct: 42 KDIVGLAETGSGKTAAFAIPILQDLLSKPRHNF-ALILTPTRELALQIKRLLMELGDKFG 100
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+ + Q ++ KF V++ TP ++VY L+ + L L + +L++DE+D+
Sbjct: 101 LKVACLVGGQHVEDQVRDLKRFKFHVIVGTPGRVVYHLE-NTKELRLNHARYLVLDEADQ 159
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK 209
+ E F +QLA I PN + ++SAT T++V K
Sbjct: 160 MLED---TFEEQLAFIMTKLH-PNKQTFLYSATMTQNVEK 195
>gi|311104225|ref|YP_003977078.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
gi|310758914|gb|ADP14363.1| ATP-dependent RNA helicase RhlE 2 [Achromobacter xylosoxidans A8]
Length = 493
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 170 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNHPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|10732632|gb|AAG22482.1|AF193054_1 unknown [Homo sapiens]
Length = 312
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 32 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 91
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 92 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 144
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 145 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 200
Query: 221 INVG 224
I V
Sbjct: 201 IFVN 204
>gi|268563805|ref|XP_002638939.1| Hypothetical protein CBG22166 [Caenorhabditis briggsae]
Length = 753
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 40/202 (19%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG-FRAVIVCPTRELAKQTYNETVRLSE 106
G+ I ACA TG+GKTAAF++PI+ + PK R +++ PTRELA Q + +LS
Sbjct: 180 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 239
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE- 160
+ L + K Q+AA + GP DV++ TP +L+ L + P+ NLA++E
Sbjct: 240 FIQLEVCLCAGGLDLKAQEAALRSGP------DVVVATPGRLIDHLH-NSPSFNLASIEV 292
Query: 161 ---------------------WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMF 199
L++DE+D++ E FRDQ+ + C+ N + +F
Sbjct: 293 FLSLEKEKFRNSEIQESKNLKVLVLDEADRMLE---EAFRDQMNELIRLCA-ENRQTLLF 348
Query: 200 SATHTEDVAKWCRRKLKRRVQI 221
SAT TE++ + LK+ V+I
Sbjct: 349 SATMTEEIDELASMSLKKPVKI 370
>gi|384498823|gb|EIE89314.1| hypothetical protein RO3G_14025 [Rhizopus delemar RA 99-880]
Length = 674
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 94/180 (52%), Gaps = 26/180 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P +IH + P K G +I+ PTRELA Q Y ET +
Sbjct: 286 GRDVIGIAKTGSGKTAAFVLPMLIHIMDQPELVKGDGPIGLILAPTRELAIQIYQETRKF 345
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ GL+ + E+F + ++L+ TP +L+ +++M A NL V +L++
Sbjct: 346 AKAYGLKVAAVYGGASKLEQFKDLRSGTVEILVATPGRLIDMIKM--KATNLRRVSYLVL 403
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ G A+ +FSAT + + + R ++INVG
Sbjct: 404 DEADRMFDLG-------FAL-------------LFSATFQKLIERLARSVTSDPIRINVG 443
>gi|359795873|ref|ZP_09298486.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
gi|359366192|gb|EHK67876.1| putative ATP-dependent RNA helicase [Achromobacter arsenitoxydans
SY8]
Length = 466
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 31 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 90
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 91 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 146
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 147 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNHPV 201
Query: 220 QINVGLR 226
+I V R
Sbjct: 202 EIEVAAR 208
>gi|358254115|dbj|GAA54145.1| ATP-dependent RNA helicase DDX27 [Clonorchis sinensis]
Length = 586
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 37/192 (19%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG---FRAVIVCPTRELAKQTYNETVR 103
L I ACA TGSGKT AFL+PI+ L + P RA+++ PTRELA Q + R
Sbjct: 19 LNHDICACARTGSGKTFAFLLPILERLTKKPSGTARSITRALVISPTRELAVQIF----R 74
Query: 104 LSEGL--------------GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQM 149
++E L GL H Q+A+ + P D++I TP +L+ L
Sbjct: 75 VAEKLVAYCPKIRIQLAAGGLDLHT----QEASLRLNP------DLVIATPGRLIDHLS- 123
Query: 150 DPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK 209
+ P NL +E+L++DE+DKL + F +Q++ I C G + +FSAT TE V +
Sbjct: 124 NAPNFNLQQIEYLVLDEADKLLD---EYFVEQISEIVKHC-GRQRQTLLFSATMTESVKE 179
Query: 210 WCRRKLKRRVQI 221
LK VQ+
Sbjct: 180 LATLSLKNPVQV 191
>gi|346325171|gb|EGX94768.1| dead box ATP-dependent rna helicase [Cordyceps militaris CM01]
Length = 891
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 14/171 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT LS G
Sbjct: 121 KDVVGMARTGSGKTAAFVIPMIERLRAHSAQFGSRALIMSPSRELAIQTLKVVKELSRGT 180
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+FG +A D++I TP + ++L ++M +LNL+++++++ DE+
Sbjct: 181 DLKAVLLVGGDSLEEQFGFMAANP-DIVIATPGRFLHLKVEM---SLNLSSIKYVVFDEA 236
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A L R +FSAT + ++ R L+
Sbjct: 237 DRLFEM---GFAAQLTEILHALP---LSRQTLLFSATLPTSLVEFARAGLQ 281
>gi|145506703|ref|XP_001439312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406496|emb|CAK71915.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ + A APTGSGKT AF +P +H+L K G R ++ P +ELA Q Y E + ++ L
Sbjct: 135 KNLIAIAPTGSGKTCAFALPTLHNLENHKEGGPRCLVFAPAQELADQLYKEFNKFNKELK 194
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
++ I ++ + + F ++ D+LI++P K + L ++ ++L+ VE++I+DE+DK
Sbjct: 195 IKQ--IQEMNREKQAFK-QAWNHIDILISSPLKFLKLHKV----VDLSTVEYVIMDEADK 247
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
FE G+ QL I + + FSAT E V R L ++I +G R
Sbjct: 248 YFELGLLAQVKQLLRILESLQ---ITYMFFSATLPEPVEDIYRELLIDPIKIMIGGR 301
>gi|358341811|dbj|GAA31574.2| ATP-dependent RNA helicase DDX47/RRP3 [Clonorchis sinensis]
Length = 464
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKTAAF IPI+ L F A+++ PTRELA Q ++ + L E
Sbjct: 52 GKDVVGLAETGSGKTAAFAIPILQDLISKPKHNF-ALVLTPTRELALQLKSQFMDLGEVY 110
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
GLR + Q ++ K+ ++I TP ++ Y L+ + L L ++ +L++DE+D
Sbjct: 111 GLRVICLVGGQHVEDQTRDLKVSKYHIIIGTPGRICYHLE-NSKDLRLNHIRYLVLDEAD 169
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK 209
++ E F DQL+ I A PN + ++SAT + V K
Sbjct: 170 QMLED---TFEDQLSAIIANLP-PNHRTYLYSATLSPKVQK 206
>gi|163855229|ref|YP_001629527.1| ATP-dependent RNA helicase [Bordetella petrii DSM 12804]
gi|163258957|emb|CAP41256.1| putative ATP-dependent RNA helicase [Bordetella petrii]
Length = 476
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P R +I+ PTRELA Q Y
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRTLILTPTRELADQVYESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + ++L+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSKHTPLRSAVVFGGVDIGPQKEALR--RGCEILVATPGRL--LDHVEQKTVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + G D++ + P ++G +FSAT + ++ K R L + V
Sbjct: 170 ILVLDEADRMLDMGFLPDLDRIVRLL-----PAQRQGLLFSATFSNEIRKLGRTYLNQPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|350416437|ref|XP_003490948.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Bombus
impatiens]
Length = 741
Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 25/187 (13%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-----LRGPKNLGFRAVIVCPTRELAKQTYNETV 102
+GR I CA TG+GKTAA+++P + L GP R +++ PTREL Q Y T
Sbjct: 194 MGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPSI--SRVLVLVPTRELGVQVYQVTK 251
Query: 103 RLSE------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+LS+ GL + + K+Q+A + P D++I TP +L+ L+ + P+ +L
Sbjct: 252 QLSQFTTIEVGLSVGGLDV-KVQEAVLRKNP------DIVIATPGRLIDHLR-NTPSFSL 303
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
++E LI+DE+D++ + F +Q+ I CS + +FSAT TE+V L
Sbjct: 304 DSIEVLILDEADRMLD---EYFAEQMKYIVKQCSRSR-QTILFSATMTEEVKDLAAVSLD 359
Query: 217 RRVQINV 223
+ V++ V
Sbjct: 360 KPVKVFV 366
>gi|367006623|ref|XP_003688042.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
gi|357526349|emb|CCE65608.1| hypothetical protein TPHA_0M00330 [Tetrapisispora phaffii CBS 4417]
Length = 981
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 91/155 (58%), Gaps = 10/155 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P+I L+ +G RAVI+ P+RELA QT+ S G
Sbjct: 162 RDIVGMARTGSGKTAAFILPMIEKLKTHSGKIGARAVILSPSRELAMQTHKVFKDFSRGS 221
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+F + DV++ TP + ++L ++M L+L VE+++ DE+
Sbjct: 222 QLRSVLLTGGDSLEEQFSMMMSNP-DVIVATPGRFMHLKVEM---GLDLKTVEYVVFDEA 277
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF++QL + A+ N + +FSAT
Sbjct: 278 DRLFEM---GFQEQLNELLASLP-MNRQTLLFSAT 308
>gi|57529371|ref|NP_001006293.1| probable ATP-dependent RNA helicase DDX27 [Gallus gallus]
gi|53130268|emb|CAG31463.1| hypothetical protein RCJMB04_6k21 [Gallus gallus]
Length = 758
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 99/173 (57%), Gaps = 30/173 (17%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 216 LGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 275
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL + K Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 276 QFSSVTTCLAVGGLDV------KTQEAALRSGP------DILIATPGRLIDHLH-NCPSF 322
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
+L++VE LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V
Sbjct: 323 HLSSVEVLILDEADRMLDE---YFEEQMKEIIRLCS-RHRQTMLFSATMTEEV 371
>gi|336172862|ref|YP_004580000.1| DEAD/DEAH box helicase [Lacinutrix sp. 5H-3-7-4]
gi|334727434|gb|AEH01572.1| DEAD/DEAH box helicase domain protein [Lacinutrix sp. 5H-3-7-4]
Length = 444
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKN--LGFRAVIVCPTRELAKQTYNETVRLS 105
G + A A TG+GKTA F +P++H L PK RA+++ PTRELA Q Y S
Sbjct: 38 GYDVLASAQTGTGKTAGFTLPLLHILSENPKEKFRPIRALVLTPTRELAAQVYANVKEYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
E L LR+ VI G + Q + R DVL+ TP +L+ L L+L VE ++
Sbjct: 98 EFLNLRSVVIFGGVNQKPQVANIRKG--VDVLVATPGRLIDLNNQG--LLSLKRVEIFVL 153
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQI 221
DE+D++ + G RD V+ P+ ++ MFSAT ++D+ K LK VQ+
Sbjct: 154 DEADRMLDMGF--LRDIERVMKLM---PDKRQNLMFSATFSKDIKKLAFNILKNPVQV 206
>gi|154336403|ref|XP_001564437.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061472|emb|CAM38500.1| putative ATP-dependent RNA helicase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 803
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 96/158 (60%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ QT + L+
Sbjct: 59 GNDVVAMARTGSGKTAAFLIPMLNALKAHSKVVGIRGLVLSPTRELSLQTLHNGFALNRF 118
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G ++Q E A DV++ TP +L+++ M+ +L+L +V L++
Sbjct: 119 LDLRFAALVGGDSMEQQFELL----ASNPDVVVATPGRLLHI--MEEASLHLTSVRCLVL 172
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 173 DEADRLFELGL---QPQIGAIMQKIP-ESCQRALFSAT 206
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I A TGSGKTAAF++PI+ L R K R I+ PTRELA Q YN +L+
Sbjct: 346 LGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLA 405
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKF-----DVLITTPNKLVYLLQMDPPALNLANVE 160
H Q F R + DV+I TP + + ++ + P+ + +E
Sbjct: 406 ------THTDITFCQLVGGFSLREQENILKKRPDVIIATPGRFIDHMR-NSPSFTVDTLE 458
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ E GF D+L I P ++ M FSAT T+ V K R L R V
Sbjct: 459 ILVLDEADRMLE---DGFADELNEILTTI--PKSRQTMLFSATMTDSVDKLIRVGLNRPV 513
Query: 220 QINV 223
++ V
Sbjct: 514 RLMV 517
>gi|254585603|ref|XP_002498369.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
gi|238941263|emb|CAR29436.1| ZYRO0G08580p [Zygosaccharomyces rouxii]
Length = 539
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 103/182 (56%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A TGSGKT AF +P I L K + +++ PTRELA QTY+ + L+
Sbjct: 163 GRDVIGVAETGSGKTFAFGVPAIDQLVSNGDAKRKSVKVLVISPTRELASQTYDNLIILT 222
Query: 106 EGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+GL V G + + ++ R++Q V++ TP +L+ L+ + +++L+ V++L++
Sbjct: 223 NKVGLECCCVYGGVPKQEQRNQLRNSQ---VVVATPGRLLDLI--NEQSVDLSQVQYLVL 277
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++ E +GF + + I + + + MF+AT ++V + ++ V++++G
Sbjct: 278 DEADRMLE---KGFEEDIKNIINQTNSRDRQTLMFTATWPKEVRELASTFMRDPVKVSIG 334
Query: 225 LR 226
R
Sbjct: 335 NR 336
>gi|398995582|ref|ZP_10698462.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
gi|398129619|gb|EJM18978.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM21]
Length = 448
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI+H L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILHRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R ++ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTIKEVERFAQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + A C+ N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVAECT--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 32/191 (16%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETV 102
L+ LG+ I A TGSGKTAAF++PI+ L R K R +I+CPTRELA Q ++
Sbjct: 292 LALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVAT 351
Query: 103 RLSE-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
+++ GL L K+Q+ + P D++I TP + + ++ +
Sbjct: 352 KIASFTDIMVCLCIGGLSL------KLQEQELRKRP------DIVIATPGRFIDHMR-NS 398
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKW 210
+ N+E +++DE+D++ E GF D+L I AC P ++ M FSAT T+ V
Sbjct: 399 QGFTVENIEIMVMDEADRMLED---GFADELNEIIQAC--PKSRQTMLFSATMTDKVDDL 453
Query: 211 CRRKLKRRVQI 221
R L R V++
Sbjct: 454 IRLSLNRPVRV 464
>gi|357617988|gb|EHJ71096.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 776
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 101/180 (56%), Gaps = 17/180 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
LG+ I ACA TG+GKTAA+++P++ L P R +++ PTREL Q + T +L++
Sbjct: 203 LGKDICACAATGTGKTAAYMVPVLERLLYKPTERRTRVLVLVPTRELGAQVHTVTRQLAQ 262
Query: 107 ----GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+GL + K Q++ + P DV+I TP +L+ ++ + P+ +L ++E
Sbjct: 263 FTSVTIGLSVGGLDVKYQESVLRRHP------DVVIATPGRLIDHVR-NTPSFDLNSIEV 315
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
LI+DE+D++ + F +Q+ I CS P + +FSAT ++ V LK+ V++
Sbjct: 316 LILDEADRMLD---EYFAEQMKEIIRQCS-PKRQTMLFSATMSDQVRDLAAVSLKKPVKL 371
>gi|406606644|emb|CCH41966.1| hypothetical protein BN7_1505 [Wickerhamomyces ciferrii]
Length = 528
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG-FRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P + L +L + + V PTRELA Q Y+ L++
Sbjct: 155 GKDVIGVAETGSGKTLAFGVPAVDKLIKSGDLKPVQVLAVSPTRELASQIYDNLKTLTDK 214
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+GL + G + + ++ R +K ++I TP +L+ L M+ ++NL+NV +L++DE
Sbjct: 215 VGLNCVCLYGGVPKEQQR---RDLKKAQIVIATPGRLIDL--MNEGSVNLSNVHYLVLDE 269
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + + + + + MF+AT ++V + +K V++++G R
Sbjct: 270 ADRMLE---KGFEEDIKNVMRSTTHKARQTLMFTATWPKEVRELASGFMKEPVKVSIGNR 326
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTA+F++P I+H + P K G VI PTRELA Q + E +
Sbjct: 274 GRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIFLEAKKF 333
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + E+F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 334 AKAYGVRVSAVYGGMSKLEQFKELKA-GCEIVVATPGRLIDMLKMK--ALTMMRATYLVL 390
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 391 DEADRMFDL---GFEPQVRSIVGQIR-PDRQTLLFSATMPCKVEKLAREILSDPIRVTVG 446
>gi|340059591|emb|CCC53980.1| putative ATP-dependent DEAD/H RNA helicase, fragment, partial
[Trypanosoma vivax Y486]
Length = 504
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 15/155 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + ACAPTGSGKT AFL+P+ LR P +G RA+IV PT ELA+Q E L +G
Sbjct: 163 GRDVLACAPTGSGKTLAFLVPMFARLREPDPEVGVRALIVTPTMELAEQIEREVFLLMKG 222
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
+ G+ S + D+ +TTP ++ +L+ +L++ V++L+ DE
Sbjct: 223 QRWKLVRHGQ-----------STRNKDIFVTTPGRVAVMLEKKLVSLDM--VQYLVFDEG 269
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+L+++ + + V+ AC+ +F+AT
Sbjct: 270 DRLWDSTTDNLQ-VVDVVLTACTLKEKVVALFTAT 303
>gi|67517343|ref|XP_658548.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|74681451|sp|Q5BET6.1|ROK1_EMENI RecName: Full=ATP-dependent RNA helicase rok1
gi|40746817|gb|EAA65973.1| hypothetical protein AN0944.2 [Aspergillus nidulans FGSC A4]
gi|259488768|tpe|CBF88477.1| TPA: ATP-dependent RNA helicase rok1 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BET6] [Aspergillus
nidulans FGSC A4]
Length = 742
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 39/204 (19%)
Query: 51 QIFACAPTGSGKTAAFLIPII-----HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+ APTGSGKT +F+IP+I H P+ G AV+V PT+ELA Q NE +L+
Sbjct: 243 DLLVVAPTGSGKTLSFMIPVINKIVRHHHTHPEERGIFAVVVAPTKELASQIVNEGRKLA 302
Query: 106 EGLGLRAHVIGKIQQAAEKF-----------------------------GPRSAQKFDVL 136
G G++ ++ K + E+ GP K D+L
Sbjct: 303 LGTGVKVTLMKKGMRVVERENEDEDVLDESNSESSESESDERTPNNKNKGPVPITKSDIL 362
Query: 137 ITTPNKLVYLLQMD--PPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
++TP +LV L + P L V L++DE+D L + FRDQ I+ +C+ P L
Sbjct: 363 VSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDP---LFRDQTLDIWRSCTHPEL 419
Query: 195 KRGMFSATHTEDVAKWCRRKLKRR 218
+ ++SAT + + +K R
Sbjct: 420 RASLWSATMGSSIEDMAKTTIKER 443
>gi|442750425|gb|JAA67372.1| Putative atp-dependent rna helicase [Ixodes ricinus]
Length = 767
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTAAFL+PI+ L+ G RA+++ PTRELA QT+ L +
Sbjct: 51 GRDMVAMARTGSGKTAAFLVPILDKLKARSLQAGARALVLSPTRELALQTHKFAKELGKF 110
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L++ VI ++F + DVLI TP + +++ ++MD L L+++++++ DE
Sbjct: 111 TDLKSTVILGGDNMEDQFEA-IHENPDVLIATPGRFLHIVMEMD---LKLSSIKYVVFDE 166
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF++QL I N + +FSAT
Sbjct: 167 ADRLFEM---GFQEQLNEILHRLP-ENRQTLLFSAT 198
>gi|405975829|gb|EKC40371.1| ATP-dependent RNA helicase DDX54, partial [Crassostrea gigas]
Length = 742
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 70 GKDVVAMARTGSGKTAAFLIPMFEKLKTHTAKSGARGLILSPTRELALQTLKFTKELGKY 129
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
GLRA V+ + ++F + D++I TP +L++ L++M+ L +VE+++ DE
Sbjct: 130 TGLRAAVVLGGDKMDDQFAALH-ENPDIIIATPGRLMHVLVEMEK---KLKSVEYVVFDE 185
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF++QL I
Sbjct: 186 ADRLFEM---GFQEQLHEI 201
>gi|404401914|ref|ZP_10993498.1| DEAD/DEAH box helicase [Pseudomonas fuscovaginae UPB0736]
Length = 448
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L +VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKDVEVLVLDEADRMLDM---GFAEDVQRLVEEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|410904152|ref|XP_003965556.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Takifugu
rubripes]
Length = 863
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 84/139 (60%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 111 GKDVVAMARTGSGKTAAFLIPMFEKLKAPQAQTGARALILSPTRELALQTMKFTKELGKF 170
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
L+ +I ++F + D++I TP +L++++ +M+ L L N+E+++ DE
Sbjct: 171 TKLKTALILGGDSMDDQFAALH-ENPDIIIGTPGRLMHVIKEMN---LKLHNMEYVVFDE 226
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +QL I
Sbjct: 227 ADRLFEM---GFAEQLQEI 242
>gi|255072735|ref|XP_002500042.1| predicted protein [Micromonas sp. RCC299]
gi|226515304|gb|ACO61300.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 523
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 7/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++H LR G RAV++ PTRELA QTY LS+
Sbjct: 108 GADVVAMARTGSGKTAAFLIPVLHKLRQHSLKAGARAVVLSPTRELALQTYKFAQELSKF 167
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR + +F ++ D+L+ TP +L++ ++ + ++ +V +++DE+
Sbjct: 168 TDLRCVCVVGGDSMEAQFDDLASNP-DLLVATPGRLLHHVE-EISGFSIRSVSHVVLDEA 225
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+L E GF DQL I + + +FSAT +A++ R LK
Sbjct: 226 DRLLEM---GFADQLRDIMKQVAD-QRQCLLFSATMPSALAEFVRVGLK 270
>gi|67624743|ref|XP_668654.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium hominis
TU502]
gi|54659828|gb|EAL38390.1| DEAD box polypeptide, Y chromosome-related [Cryptosporidium
hominis]
Length = 702
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG------PKNLGFR--------AVIVCPTRELA 94
GR + ACA TGSGKTAAFL PI+ + P+ R A+++ PTRELA
Sbjct: 238 GRDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELA 297
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
QTY E+ + G G+R +V+ + + + D+++ TP +L L+ D +
Sbjct: 298 IQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLD-RGSDIIVATPGRLRDLI--DRGKV 354
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----MFSATHTEDVAKW 210
NL +++LI+DE+D++ + GF Q+ I P+ G MFSAT ++ +
Sbjct: 355 NLKLIKFLILDEADRMLDM---GFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQL 411
Query: 211 CRRKLKRRVQINVG 224
+ L + + VG
Sbjct: 412 AKDFLHNYIFLTVG 425
>gi|66357412|ref|XP_625884.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|46226846|gb|EAK87812.1| Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc)
[Cryptosporidium parvum Iowa II]
gi|323510023|dbj|BAJ77905.1| cgd4_3000 [Cryptosporidium parvum]
Length = 702
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG------PKNLGFR--------AVIVCPTRELA 94
GR + ACA TGSGKTAAFL PI+ + P+ R A+++ PTRELA
Sbjct: 238 GRDLMACAQTGSGKTAAFLFPIVMKMLNDGPPPTPQQSSLRIKRMAYPVALVLSPTRELA 297
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
QTY E+ + G G+R +V+ + + + D+++ TP +L L+ D +
Sbjct: 298 IQTYEESRKFCFGTGIRTNVLYGGSEVRSQIMDLD-RGSDIIVATPGRLRDLI--DRGKV 354
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----MFSATHTEDVAKW 210
NL +++LI+DE+D++ + GF Q+ I P+ G MFSAT ++ +
Sbjct: 355 NLKLIKFLILDEADRMLDM---GFAPQIREIVEDSEMPHSLDGRQTVMFSATFPREIQQL 411
Query: 211 CRRKLKRRVQINVG 224
+ L + + VG
Sbjct: 412 AKDFLHNYIFLTVG 425
>gi|405953609|gb|EKC21239.1| Putative ATP-dependent RNA helicase DDX27 [Crassostrea gigas]
Length = 740
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 100/190 (52%), Gaps = 30/190 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LGR + ACA TGSGKT AF++PI+ L R + R +++ PTRELA Q + +L+
Sbjct: 204 LGRDLCACAVTGSGKTVAFMLPILERLMYRTQEEAATRVLVLVPTRELAVQVHTVARQLA 263
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL ++A Q+AA + P D++I TP +L+ L + P
Sbjct: 264 QYTNIEIVLSAGGLDIKA------QEAALRMKP------DIVIATPGRLIDHLH-NSPNF 310
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L N+E L++DE+D++ + F +Q+ I C+ + +FSAT +E V
Sbjct: 311 SLRNIEILVLDEADRMLD---EYFAEQMNEIIRQCAQTR-QTMLFSATMSEAVQDLASVS 366
Query: 215 LKRRVQINVG 224
LK+ V+I V
Sbjct: 367 LKQPVKIFVN 376
>gi|425901734|ref|ZP_18878325.1| putative ATP-dependent RNA helicase [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397892868|gb|EJL09344.1| putative ATP-dependent RNA helicase [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 444
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|388468703|ref|ZP_10142913.1| putative ATP-dependent RNA helicase [Pseudomonas synxantha BG33R]
gi|388012283|gb|EIK73470.1| putative ATP-dependent RNA helicase [Pseudomonas synxantha BG33R]
Length = 444
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLTMEGPKVAANSARALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R D+L+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQHLPLTTYAVYGGVSINPQMMKLRKG--VDILVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|401625757|gb|EJS43750.1| dbp3p [Saccharomyces arboricola H-6]
Length = 517
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H L K G + +++ PTRELA Q Y+ + L+
Sbjct: 143 GKDVVGVAETGSGKTFAFGVPAISHLLDDQKKRGIQVLVISPTRELASQIYDNLIILTNK 202
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+ V G + + ++ R +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 203 VGMECCCVYGGVPKDEQRNQLRKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 257
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 258 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIRVSIG 312
>gi|345328224|ref|XP_001507068.2| PREDICTED: probable ATP-dependent RNA helicase DDX27
[Ornithorhynchus anatinus]
Length = 716
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 104/190 (54%), Gaps = 30/190 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 174 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 233
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL + K Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 234 QFSNVTTCLAVGGLDV------KTQEAALRAGP------DILIATPGRLIDHLH-NCPSF 280
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L+++E LI+DE+D++ + F +Q+ I CS + + +FSAT T++V
Sbjct: 281 HLSSIEVLILDEADRMLD---EYFEEQMKEIIKMCSH-HRQTMLFSATMTDEVKDLASVS 336
Query: 215 LKRRVQINVG 224
LK V+I V
Sbjct: 337 LKNPVRIFVN 346
>gi|221504486|gb|EEE30159.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 1544
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT A+ +P+I + K FR A+++ PTREL Q + E R
Sbjct: 1010 GRDVIAVAETGSGKTLAYGLPLIRHVLSVKQQDFRDGAIALVIAPTRELCNQIFKEINRC 1069
Query: 105 SEGLGLRAHV------IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLA 157
+ + L A IG Q A K G +V++ TP +L+ +L M+ L +L
Sbjct: 1070 CKLVDLNAVACYGGAGIGS-QLGAIKRG------VEVIVGTPGRLIDILTMNGGRLTSLK 1122
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
V ++++DE+D++F+ GF Q+ I A+ S P+ + +FSAT + RR L++
Sbjct: 1123 RVTFIVLDEADRMFDF---GFEPQVTSIIAS-SRPDRQTCLFSATFPPHIEALARRILQK 1178
Query: 218 RVQINVG 224
V+I VG
Sbjct: 1179 PVEIIVG 1185
>gi|221482438|gb|EEE20786.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 1544
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT A+ +P+I + K FR A+++ PTREL Q + E R
Sbjct: 1010 GRDVIAVAETGSGKTLAYGLPLIRHVLSVKQQDFRDGAIALVIAPTRELCNQIFKEINRC 1069
Query: 105 SEGLGLRAHV------IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLA 157
+ + L A IG Q A K G +V++ TP +L+ +L M+ L +L
Sbjct: 1070 CKLVDLNAVACYGGAGIGS-QLGAIKRG------VEVIVGTPGRLIDILTMNGGRLTSLK 1122
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
V ++++DE+D++F+ GF Q+ I A+ S P+ + +FSAT + RR L++
Sbjct: 1123 RVTFIVLDEADRMFDF---GFEPQVTSIIAS-SRPDRQTCLFSATFPPHIEALARRILQK 1178
Query: 218 RVQINVG 224
V+I VG
Sbjct: 1179 PVEIIVG 1185
>gi|237841393|ref|XP_002369994.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967658|gb|EEB02854.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 1544
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 22/187 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT A+ +P+I + K FR A+++ PTREL Q + E R
Sbjct: 1010 GRDVIAVAETGSGKTLAYGLPLIRHVLSVKQQDFRDGAIALVIAPTRELCNQIFKEINRC 1069
Query: 105 SEGLGLRAHV------IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLA 157
+ + L A IG Q A K G +V++ TP +L+ +L M+ L +L
Sbjct: 1070 CKLVDLNAVACYGGAGIGS-QLGAIKRG------VEVIVGTPGRLIDILTMNGGRLTSLK 1122
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
V ++++DE+D++F+ GF Q+ I A+ S P+ + +FSAT + RR L++
Sbjct: 1123 RVTFIVLDEADRMFDF---GFEPQVTSIIAS-SRPDRQTCLFSATFPPHIEALARRILQK 1178
Query: 218 RVQINVG 224
V+I VG
Sbjct: 1179 PVEIIVG 1185
>gi|37521894|ref|NP_925271.1| ATP-dependent RNA helicase [Gloeobacter violaceus PCC 7421]
gi|35212893|dbj|BAC90266.1| gll2325 [Gloeobacter violaceus PCC 7421]
Length = 384
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 92/176 (52%), Gaps = 11/176 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACA TGSGKTAAFL+PI+ L RA+++ PTRELA Q +L+
Sbjct: 38 GRDVLACAMTGSGKTAAFLLPILQQLIAQPRSTTRALVLTPTRELAGQIEMHLGQLARYS 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR A +IG + + R+ K +VLI TP +L L D P LAN+E L++DE
Sbjct: 98 ALRGASIIGGVSPEPQA---RAFHKGVEVLIGTPGRL--LDHFDQPYARLANLEILVLDE 152
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
+D++ E GF + I +G + FSAT +AK L+ V +N
Sbjct: 153 ADRMLEM---GFLPDIRRIL-RHTGHRRQTLFFSATMPGPIAKLATEILRNPVTLN 204
>gi|444910739|ref|ZP_21230918.1| ATP-dependent RNA helicase RhlE [Cystobacter fuscus DSM 2262]
gi|444718836|gb|ELW59644.1| ATP-dependent RNA helicase RhlE [Cystobacter fuscus DSM 2262]
Length = 550
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 98/177 (55%), Gaps = 13/177 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + CA TG+GKTAA+L+P++ L G G V++ PTREL +Q +E +
Sbjct: 40 GRDVIGCAATGTGKTAAYLLPLVERLAGAP--GPAGVVLAPTRELVQQIADEATFFGQPR 97
Query: 109 GL-RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL +A VIG A+ R Q +++ TP +L LLQ +NL+ V L++DE+
Sbjct: 98 GLAQAVVIGGTDATAQVEALR--QNPSLVLATPGRLADLLQAG--VVNLSTVRMLVLDEA 153
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
D++ E GF +L I AA P ++ +FSAT +V ++ + L++ V++ V
Sbjct: 154 DRMLEM---GFMPELEKILAAL--PRERQTLLFSATLGHNVTRFAQEVLRKPVRVEV 205
>gi|428164262|gb|EKX33294.1| hypothetical protein GUITHDRAFT_81602 [Guillardia theta CCMP2712]
Length = 679
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A + TGSGKTAAF +PI+ L R + R +++ PTRELA Q + +L+
Sbjct: 150 GKDVCASSRTGSGKTAAFALPILERLLYRPRRVAATRVLVLTPTRELAVQAHAMMEKLAA 209
Query: 107 GLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+R + VIG ++ ++ R +K DV++ TP +++ L+ + P + +E L++D
Sbjct: 210 FTDIRCYIVIGGVKNQLQETELR--KKPDVVVATPGRMIDHLR-NAPGIGFEALEILVLD 266
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
E+D+L E GF +++ + C P ++ M FSAT T DV K L+R V++
Sbjct: 267 EADRLLEM---GFTEEVQELVKMC--PQQRQTMLFSATMTHDVDKLAAFSLRRPVRV 318
>gi|299115354|emb|CBN74178.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 923
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 24 TLAVVSNSIFKHFEPHFTITYLSPL-GRQIFACAPTGSGKTAAFLIPIIHSL-------- 74
T+A + + F P ITY L GR I + TG+GKT AF +P+I L
Sbjct: 267 TVAALKARGIEKFTPVQAITYDHILSGRDIIGKSRTGTGKTIAFGLPVIQHLGRFAEDHQ 326
Query: 75 -------RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP 127
R P R ++VCPTRELA+Q Y E L GL+A V +GP
Sbjct: 327 QRTYQRGRSP-----RFLVVCPTRELARQVYGELETLGSTFGLKADVF----HGGAAYGP 377
Query: 128 RS---AQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAV 184
+ + D+L+ TP +++ LQ AL+L++V ++DE+D++ GF D +
Sbjct: 378 QMRSLSDGLDILVATPGRIMDHLQRG--ALDLSDVRHAVLDEADEMLNM---GFADDIET 432
Query: 185 IYAACSGPNLKRGMFSATHTEDVAKWCR 212
I++ + +FSAT V W R
Sbjct: 433 IFSYVDVKECQVLLFSAT----VPSWVR 456
>gi|399009866|ref|ZP_10712274.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
gi|398109615|gb|EJL99537.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM17]
Length = 444
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPK--NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVSANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|395506879|ref|XP_003757757.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Sarcophilus
harrisii]
Length = 766
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 30/189 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 228 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 287
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL +++ Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 288 QFSTVTTCLAVGGLDVKS------QEAALRAGP------DILIATPGRLIDHLH-NCPSF 334
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L+++E LI+DE+D++ + F +Q+ I CS + + +FSAT T++V
Sbjct: 335 HLSSIEVLILDEADRMLD---EYFEEQMKEIIQLCSH-HRQTMLFSATMTDEVKDLASVS 390
Query: 215 LKRRVQINV 223
LK V+I V
Sbjct: 391 LKNPVRIFV 399
>gi|367016443|ref|XP_003682720.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
gi|359750383|emb|CCE93509.1| hypothetical protein TDEL_0G01420 [Torulaspora delbrueckii]
Length = 512
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 101/181 (55%), Gaps = 11/181 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I+ L K G + +++ PTRELA Q Y+ + L E
Sbjct: 137 GKDVIGVAETGSGKTFAFGVPAINKLVTEDGKKKGVQVLVISPTRELASQIYDNMILLIE 196
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
L V G + + ++ + AQ V++ TP +L+ L+Q +++L+NV +L++D
Sbjct: 197 KADLECCCVYGGVPKYEQREKLKKAQ---VVVATPGRLLDLMQEG--SVDLSNVSYLVLD 251
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGL 225
E+D++ E +GF + + I + + + + MF+AT ++V + + V++++G
Sbjct: 252 EADRMLE---KGFEEDIKNIIRSTNTSSRQTLMFTATWPKEVRELASTFMSDPVKVSIGN 308
Query: 226 R 226
R
Sbjct: 309 R 309
>gi|319783363|ref|YP_004142839.1| DEAD/DEAH box helicase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169251|gb|ADV12789.1| DEAD/DEAH box helicase domain protein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 474
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 102/182 (56%), Gaps = 17/182 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
GR IF A TGSGKTAAF +PI+ + R PK RA+I+ PTRELA Q +
Sbjct: 53 GRDIFGIAQTGSGKTAAFALPILSKIIALGTKRRPKTA--RALILAPTRELAVQIEDTIK 110
Query: 103 RLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L++G + A V+G + + ++ + A D+LI TP +L L++ L LA+ +W
Sbjct: 111 ILAKGAHVSTALVLGGVSRFSQV--KKVAPGVDILIATPGRLTDLVREG--DLMLADTKW 166
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE D++ + GF + + I A + P+ + +FSAT ++A+ + LK +++
Sbjct: 167 LVLDEGDRMLDM---GFINDVKRI-AKATAPDRQTVLFSATMPNEIAELAKGLLKNPIRV 222
Query: 222 NV 223
V
Sbjct: 223 EV 224
>gi|293335107|ref|NP_001168851.1| uncharacterized protein LOC100382656 [Zea mays]
gi|223973339|gb|ACN30857.1| unknown [Zea mays]
Length = 692
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLG----FRAVIVCPTRELAKQTYNET 101
G A APTGSGKT +FL+P I+++ R ++LG A+IV PTREL Q +E
Sbjct: 209 GVDFLAIAPTGSGKTISFLVPAINNILCRRSRQSLGDIHELEAIIVAPTRELVHQIVSEG 268
Query: 102 VRLSEGLGLRAHVIGK-IQQAAEKFG--------------------------PRSAQKFD 134
+L++G L+ + K Q +AE+ P K D
Sbjct: 269 QKLAQGTRLKVVSMKKHTQLSAEQVDMAEDGSEDEEDKESDSEDEEDKADDKPEQITKAD 328
Query: 135 VLITTPNKLVYLLQMDPPALN--LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP 192
+L+TTP L+ L PP+ L V LI+DE+D L + FRD + + AC+ P
Sbjct: 329 ILVTTPFLLLKFLTSGPPSTQKVLPTVRDLILDEADVLLDPL---FRDAMMSDWTACTNP 385
Query: 193 NLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
+L+ +SAT ++ KL R Q
Sbjct: 386 HLRVSFWSATMGSNIESMVTEKLTSRAQ 413
>gi|336470872|gb|EGO59033.1| hypothetical protein NEUTE1DRAFT_60019 [Neurospora tetrasperma FGSC
2508]
gi|350291940|gb|EGZ73135.1| ATP-dependent RNA helicase dbp-10 [Neurospora tetrasperma FGSC
2509]
Length = 934
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
+ + A TGSGKTAAF+IP+I L+G P+ +G RA+I+ P+RELA QT L G
Sbjct: 137 KDVVGMARTGSGKTAAFVIPMIERLKGHSPR-VGSRALIMSPSRELALQTLKVVKELGRG 195
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ E+FG A D++I TP + ++L ++M+ L+LA++++++ DE
Sbjct: 196 TDLKTVLLVGGDSLEEQFG-MMASNPDIIIATPGRFLHLKVEMN---LSLASIKYVVFDE 251
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF +L I A P+ + +FSAT + ++ R L+
Sbjct: 252 ADRLFEM---GFATELTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 297
>gi|156379137|ref|XP_001631315.1| predicted protein [Nematostella vectensis]
gi|156218353|gb|EDO39252.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 20/184 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+G+ + ACA TG+GKTAAF++PI+ L R ++ R +++ PTRELA Q ++ T LS
Sbjct: 32 MGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQIHSVTNNLS 91
Query: 106 EGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ ++ + K Q+AA + P D++I TP +LV L + + L ++E
Sbjct: 92 KYTNIQVCLAAGGLDLKSQEAALRKNP------DIVIATPGRLVDHLH-NTMSFGLQSIE 144
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + FRDQ+ I P ++ M FSAT T++V + L + V
Sbjct: 145 ILVLDEADRMLD---EHFRDQMNEIIKL--SPRGRQTMLFSATMTDEVEELVTLSLNQPV 199
Query: 220 QINV 223
++ V
Sbjct: 200 RLFV 203
>gi|126664485|ref|ZP_01735469.1| DNA and RNA helicase [Marinobacter sp. ELB17]
gi|126630811|gb|EBA01425.1| DNA and RNA helicase [Marinobacter sp. ELB17]
Length = 444
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 17/184 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPK-NLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TG+GKTA F++PI+ L + P+ G R +I+ PTRELA Q ++ S
Sbjct: 38 GKDVMAAAQTGTGKTAGFVLPILQMLEQNPRTGKGPRVLILTPTRELAAQVHDSVNLYSR 97
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ RA V+ G ++ + R DVL+ TP +L+ L Q + A+ VE+L++D
Sbjct: 98 YVPTRAAVVFGGVKINPQMMKLRKG--LDVLVATPGRLMDLYQQN--AVRFNEVEFLVLD 153
Query: 166 ESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQIN 222
E+D++ + G +R R LA++ A KR +FSAT + ++ + L VQI+
Sbjct: 154 EADRMLDMGFIRDIRKILAMLPA-------KRQSLLFSATFSNEIRTLAKGLLNDPVQID 206
Query: 223 VGLR 226
V +R
Sbjct: 207 VAVR 210
>gi|85107031|ref|XP_962298.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
gi|74696531|sp|Q7S9J4.1|DBP10_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-10
gi|28923900|gb|EAA33062.1| hypothetical protein NCU07712 [Neurospora crassa OR74A]
Length = 934
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
+ + A TGSGKTAAF+IP+I L+G P+ +G RA+I+ P+RELA QT L G
Sbjct: 137 KDVVGMARTGSGKTAAFVIPMIERLKGHSPR-VGSRALIMSPSRELALQTLKVVKELGRG 195
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ E+FG A D++I TP + ++L ++M+ L+LA++++++ DE
Sbjct: 196 TDLKTVLLVGGDSLEEQFG-MMASNPDIIIATPGRFLHLKVEMN---LSLASIKYVVFDE 251
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF +L I A P+ + +FSAT + ++ R L+
Sbjct: 252 ADRLFEM---GFATELTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 297
>gi|402082831|gb|EJT77849.1| ATP-dependent RNA helicase DBP10 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 951
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF++P+I LR +G RA+I+ P+RELA QT L +G
Sbjct: 128 RDVVGMARTGSGKTAAFVVPMIERLRAHSARVGARALIMSPSRELALQTLKVVKELGKGT 187
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ ++FG + D++I TP + ++L ++M +L+L+++ +++ DE+
Sbjct: 188 DLKTVLLVGGDSLEDQFGFMTTNP-DIIIATPGRFLHLKVEM---SLDLSSIRYVVFDEA 243
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QLA I A P+ + +FSAT + ++ R L+
Sbjct: 244 DRLFEM---GFATQLAEILHALP-PSRQTLLFSATLPRSLVEFARAGLQ 288
>gi|395797811|ref|ZP_10477099.1| putative ATP-dependent RNA helicase [Pseudomonas sp. Ag1]
gi|421141916|ref|ZP_15601895.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens
BBc6R8]
gi|395338179|gb|EJF70032.1| putative ATP-dependent RNA helicase [Pseudomonas sp. Ag1]
gi|404506936|gb|EKA20927.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens
BBc6R8]
Length = 445
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPK--NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFAVPLLQLLTMEGPKVSANSVRALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ + L + V G + + R DVL+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQNVPLTTYAVYGGVSINPQMMKLRKG--VDVLVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++++ + + L + +
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDEIRQLAGQMLNDPLTVE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|40063513|gb|AAR38313.1| ATP-dependent RNA helicase RhlE [uncultured marine bacterium 581]
Length = 446
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A A TG+GKTA F +P++H L + K RA+++ PTRELA Q
Sbjct: 38 GRDVMAAAQTGTGKTAGFTLPLLHGLSKGQSAKANQVRALVLTPTRELAAQVAESVDIYG 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGP---RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L LR+ V+ G + K P R + D+LI TP +L+ L Q + A++ +E
Sbjct: 98 KYLNLRSAVVFGGV-----KINPQMMRLRKGVDILIATPGRLLDLYQQN--AMSFQKLEV 150
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + GF + I A PN ++ MFSAT +ED+ + + V+
Sbjct: 151 LILDEADRMLDM---GFIHDIRRIMKAL--PNKRQNLMFSATFSEDIRDLAKTIVNNPVE 205
Query: 221 INVGLR 226
I+V R
Sbjct: 206 ISVTPR 211
>gi|398980078|ref|ZP_10688813.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
gi|398135037|gb|EJM24167.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
Length = 446
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDI 193
>gi|298708839|emb|CBJ30797.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 819
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAFLIP++ L + +G R++I+ PTRELA QT ++S+
Sbjct: 47 GADVVVMARTGSGKTAAFLIPVLEKLGSHSHKMGARSIILSPTRELAVQTLTFARKMSKL 106
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR ++ ++F A D++I TP +L++ LQ + P L +VE ++ DE+
Sbjct: 107 KDLRMALLVGGDSMDKQFTAL-ADNPDIIIATPGRLMHHLQ-EVPEFTLRSVEVVVFDEA 164
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
D+LFE GF +QL I P ++ +FSAT + + ++ R LK V I +
Sbjct: 165 DRLFEM---GFAEQLREIMRGV--PEERQSLLFSATMPKQLVQFARAGLKDPVLIRL 216
>gi|417405072|gb|JAA49261.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 876
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GRDVVAMARTGSGKTACFLIPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIV 164
GL+ +I + ++F SA + DV+I TP +L+++ ++M+ L L +VE+++
Sbjct: 193 TGLKTALILGGDKMEDQF---SALHENPDVIIATPGRLMHVAVEMN---LKLQSVEYVVF 246
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE GF +QL I + G + + +FSAT
Sbjct: 247 DEADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 280
>gi|399546760|ref|YP_006560068.1| ATP-dependent RNA helicase rhlE [Marinobacter sp. BSs20148]
gi|399162092|gb|AFP32655.1| ATP-dependent RNA helicase rhlE [Marinobacter sp. BSs20148]
Length = 444
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 102/184 (55%), Gaps = 17/184 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPK-NLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TG+GKTA F++PI+ L + P+ G R +I+ PTRELA Q ++ S
Sbjct: 38 GKDVMAAAQTGTGKTAGFVLPILQMLEQNPRTGKGPRVLILTPTRELAAQVHDSVNLYSR 97
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ RA V+ G ++ + R DVL+ TP +L+ L Q + A+ VE+L++D
Sbjct: 98 YVPTRAAVVFGGVKINPQMMKLRKG--LDVLVATPGRLMDLYQQN--AVRFNEVEFLVLD 153
Query: 166 ESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQIN 222
E+D++ + G +R R LA++ A KR +FSAT + ++ + L VQI+
Sbjct: 154 EADRMLDMGFIRDIRKILAMLPA-------KRQSLLFSATFSNEIRTLAKGLLNDPVQID 206
Query: 223 VGLR 226
V +R
Sbjct: 207 VAVR 210
>gi|432930301|ref|XP_004081420.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Oryzias latipes]
Length = 643
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 103/205 (50%), Gaps = 24/205 (11%)
Query: 24 TLAVVSNSIFKHFEP--HFTITYLSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR- 75
TL V F+H H T+ PL GR + A A TGSGKT AFLIP +I+ L+
Sbjct: 162 TLKGVKEMGFQHMTEIQHKTV---RPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKF 218
Query: 76 GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKF 133
P+N G +I+ PTRELA QTY L E + H G I + + R A
Sbjct: 219 MPRN-GTGVIILSPTRELAMQTYG---VLKELMTHHVHTYGLIMGGSNRSAEAQRLANGV 274
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
++L+ TP +L+ LQ P N++ LI+DE+D++ E GF ++L I P
Sbjct: 275 NILVATPGRLLDHLQX-TPGFMFKNLQCLIIDEADRILEV---GFEEELKQIIKLL--PK 328
Query: 194 LKRGM-FSATHTEDVAKWCRRKLKR 217
++ M FSAT T V R LK+
Sbjct: 329 RRQTMLFSATQTRRVEDLARISLKK 353
>gi|410976686|ref|XP_003994747.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Felis catus]
Length = 866
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 113 GKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELALQTMKFTKELGKF 172
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GLR +I + ++F + DV+I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 173 TGLRTALILGGDKIEDQFAALH-ENPDVIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 228
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 229 ADRLFEM---GFAEQLQEILCRLPGGH-QTVLFSAT 260
>gi|448101925|ref|XP_004199679.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
gi|359381101|emb|CCE81560.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
Length = 548
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT F +P +++ G + + V PTRELA Q Y+ V +++
Sbjct: 176 GQDVVGVAETGSGKTLGFGVPAVNNFLRLGKQGLKILCVSPTRELAVQIYDNLVEVTKST 235
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
++ V+ G + + + + A +V++ TP +L+ ++ + A+NL V++L++DE+
Sbjct: 236 SVKCTVLYGGVPKYEQIENLKGA---NVVVATPGRLIDII--NDGAINLGTVDYLVLDEA 290
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + I +G + + MF+AT ++V + +K V++N+G R
Sbjct: 291 DRMLE---KGFEQDIKTIMQNTAGASRQTVMFTATWPKEVRELASSFMKNPVKVNIGNR 346
>gi|296200672|ref|XP_002747679.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Callithrix
jacchus]
Length = 764
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 16/182 (8%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-----RGPKNLGFRAVIVCPTRELAKQTYNETV 102
LG+ I ACA TG+GKTAAF +P++ L RGP R +++ PTREL Q ++ T
Sbjct: 222 LGKDICACAATGTGKTAAFALPVLERLIYKPRRGPVT---RVLVLVPTRELGIQVHSVTR 278
Query: 103 RLSEGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+L++ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E
Sbjct: 279 QLAQFCNITTCLAVGGLDVKSQEVALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEV 335
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I
Sbjct: 336 LILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRI 391
Query: 222 NV 223
V
Sbjct: 392 FV 393
>gi|229828479|ref|ZP_04454548.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
gi|229793073|gb|EEP29187.1| hypothetical protein GCWU000342_00541 [Shuttleworthia satelles DSM
14600]
Length = 538
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 15/179 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + CA TG+GKTAAF +P++H L K RA+++ PTRELA Q ++ + L
Sbjct: 99 GRDMIGCAQTGTGKTAAFALPVLHKLTLLKRPRVRALVLTPTRELAIQIFDNFKKYGRYL 158
Query: 109 GLRAHVIGKIQQAAEKFGPRSA---QKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
LR + K GP+ + D+L+ TP +L+ + D ++L++VE L++D
Sbjct: 159 HLRTVCL----YGGAKRGPQIGALRRGADILVATPGRLLDFMGQD--LVDLSSVEILVLD 212
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
E+D++ + GF ++ I S P+ ++ MFSAT ++V + R LK VQ+ V
Sbjct: 213 EADRMLDM---GFLPDVSRIVE--STPSKRQTLMFSATMEKEVRQLADRMLKDPVQVQV 266
>gi|407411508|gb|EKF33546.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi
marinkellei]
Length = 825
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP+++ L+ K +G R +++ PTREL+ Q ++L++
Sbjct: 65 GNDVVAMARTGSGKTAAFLIPMLNLLKSHSKTVGIRGLVLAPTRELSLQILRFGIQLNKF 124
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G ++Q E G D+++ TP +L+++ M+ +L L+ V+ L++
Sbjct: 125 LDLRFAALVGGNSLEQQFELLGSNP----DIVVATPGRLLHI--MEEASLKLSMVKCLVL 178
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRGMFSAT 202
DE+D+LFE G+ Q ++ P+ +R +FSAT
Sbjct: 179 DEADRLFELGL-----QPQIVAVMQKVPDACQRALFSAT 212
>gi|336263707|ref|XP_003346633.1| hypothetical protein SMAC_04806 [Sordaria macrospora k-hell]
gi|380090528|emb|CCC11825.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 934
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 101/170 (59%), Gaps = 12/170 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
+ + A TGSGKTAAF+IP+I L+G P+ +G RA+I+ P+RELA QT L G
Sbjct: 138 KDVVGMARTGSGKTAAFVIPMIERLKGHSPR-VGARALIMSPSRELALQTLKVVKELGRG 196
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+ ++ E+FG +A D++I TP + ++L ++M +L+L++V++++ DE
Sbjct: 197 TDLKTVLLVGGDSLEEQFGMMAANP-DIIIATPGRFLHLKVEM---SLSLSSVKYVVFDE 252
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF +L I A P+ + +FSAT + ++ R L+
Sbjct: 253 ADRLFEM---GFATELTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 298
>gi|346977175|gb|EGY20627.1| ATP-dependent RNA helicase DBP10 [Verticillium dahliae VdLs.17]
Length = 899
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I L+ G RA+I+ P+RELA QT ++G
Sbjct: 125 KDVVGMARTGSGKTAAFVIPMIERLKTHSAKFGARALIMSPSRELAIQTLRVVKDFNKGT 184
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+F SA D++I TP + ++L ++M +LNL+++++++ DE+
Sbjct: 185 DLKAALVVGGDSMDEQFSLLSANP-DIIIATPGRFLHLKVEM---SLNLSSIQYVVFDEA 240
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 241 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 285
>gi|168065191|ref|XP_001784538.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663919|gb|EDQ50659.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 748
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP+I L N G RAVI+ P+RELA QT+ LS+
Sbjct: 44 GYDVVAMARTGSGKTAAFLIPMIEKLVEHSNNAGARAVILSPSRELALQTFKFCKELSKY 103
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L+ ++ +F + A DV+I TP +L++ L + ++L VE+++ DE+
Sbjct: 104 TDLKIAILVGGDSMEAQF-EQLAGNPDVIIATPGRLMHHLS-EVEGMSLRTVEYIVFDEA 161
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL I + G + + +FSAT
Sbjct: 162 DRLFEM---GFAEQLRQIMSHL-GESRQVLLFSAT 192
>gi|388468344|ref|ZP_10142554.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
gi|388011924|gb|EIK73111.1| DEAD/DEAH box helicase domain protein [Pseudomonas synxantha BG33R]
Length = 448
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++P+++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + A C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVAECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|389873083|ref|YP_006380502.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
gi|388538332|gb|AFK63520.1| ATP-dependent RNA helicase [Advenella kashmirensis WT001]
Length = 476
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 94/186 (50%), Gaps = 16/186 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR I A TG+GKTAAF +P++H L P RA+I+ PTRELA Q
Sbjct: 53 GRDIMGAAQTGTGKTAAFTLPLLHRLMPMANSSMSPARHPVRALILAPTRELADQVAESV 112
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S LR V+ G + A++ R + ++LI TP +L L ++ ++L+ V
Sbjct: 113 KRYSHSSPLRVAVVFGGVDMNAQRDQLR--KGCELLIATPGRL--LDHIEQKNVSLSQVS 168
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
L++DE+D++ + GF L I P + +FSAT + D+ K R L V+
Sbjct: 169 VLVLDEADRMLDM---GFLPDLERIVRLLPKPR-QSLLFSATFSNDIRKLARSFLNNPVE 224
Query: 221 INVGLR 226
INV R
Sbjct: 225 INVAPR 230
>gi|356558698|ref|XP_003547640.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 9/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFL+P++H L P++ G RA+I+ PTR+LA QT T L
Sbjct: 55 GSDVVAMARTGSGKTAAFLVPMLHRLNQHIPQS-GVRALILSPTRDLALQTLKFTKELGH 113
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR ++ +F AQ D++I TP +L++ L + ++L +VE+++ DE
Sbjct: 114 FTDLRVSLLVGGDSMESQF-EELAQSPDIIIATPGRLMHHLS-EVDDMSLRSVEYVVFDE 171
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D LF G+ GF +QL I A G N + +FSAT +A++ + L+
Sbjct: 172 ADCLF--GM-GFAEQLHQILAQL-GENRQTLLFSATLPSALAEFAKAGLR 217
>gi|440637394|gb|ELR07313.1| hypothetical protein GMDG_02493 [Geomyces destructans 20631-21]
Length = 582
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 100/180 (55%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKT AF +P I H PK G +AV+V PTRELA Q+Y + +L+
Sbjct: 205 GRDVIGVAETGSGKTMAFAVPCIRHISEQPKFKGAKAVVVSPTRELAMQSYEQINKLAAL 264
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G++A V G + + ++ R+ + D+++ TP +L L+Q + +L+ V ++++DE
Sbjct: 265 SGMQAVCVYGGVAKDEQR---RALKTADIVVATPGRLNDLIQEG--SADLSKVSYVVLDE 319
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ + +GF +++ I P KR MF+AT E V + ++I +G
Sbjct: 320 ADRMLD---KGFEEEIRKIINTAR-PLGKRQTLMFTATWPESVRSLASTFMTSPIKIAIG 375
>gi|342186417|emb|CCC95903.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 552
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + ACAPTGSGKT AFL+P+ L+ P + G RA+I+ PT ELA+Q E L +
Sbjct: 167 GRDVLACAPTGSGKTLAFLLPMFARLKRPDREAGVRALIITPTMELAEQIEREAFFLMK- 225
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G R ++ Q K D+ ITTP ++ +L+ ++L NV++L+ DE
Sbjct: 226 -GERWKLVQHGQTTRNK---------DIFITTPGRVFSMLEKG--LVDLGNVQYLVFDEG 273
Query: 168 DKLFEAGVRGFRDQLAVIYA---ACSGPNLKRGMFSATHTEDVAKWCR 212
D+L+++ D L ++ A AC +F+AT ++ + R
Sbjct: 274 DRLWDSTT----DNLKIVDAVLTACVCSEKVVALFTATLSKKIEAMAR 317
>gi|328704199|ref|XP_001943651.2| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Acyrthosiphon pisum]
Length = 771
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 23/184 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGF----RAVIVCPTRELAKQTYNETV 102
LGR I CA TG+GKTAA+++PI+ L PK GF R +++ PTREL Q Y T
Sbjct: 201 LGRDICGCAATGTGKTAAYMLPILERLLYRPK--GFTPITRVLVLVPTRELGVQVYQVTK 258
Query: 103 RLSEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+L++ + + +G K+Q++ + P DV+I TP +L+ LQ + P+ +LA
Sbjct: 259 QLAQFTSVEVGLSVGGLELKVQESILRKNP------DVVIATPGRLLDHLQ-NTPSFSLA 311
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
++E L++DE+D++ + F DQ+ I C+ + +FSAT T+ V L +
Sbjct: 312 DLEVLVLDEADRMLD---ENFADQMKEIINMCARTR-QTMLFSATMTDAVNDLATVSLSK 367
Query: 218 RVQI 221
V+I
Sbjct: 368 PVKI 371
>gi|302406797|ref|XP_003001234.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
gi|261359741|gb|EEY22169.1| ATP-dependent RNA helicase DBP10 [Verticillium albo-atrum VaMs.102]
Length = 902
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I L+ G RA+I+ P+RELA QT ++G
Sbjct: 125 KDVVGMARTGSGKTAAFVIPMIERLKTHSAKFGARALIMSPSRELAIQTLRVVKDFNKGT 184
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+F SA D++I TP + ++L ++M +LNL+++++++ DE+
Sbjct: 185 DLKAALVVGGDSMDEQFSLLSANP-DIIIATPGRFLHLKVEM---SLNLSSIQYVVFDEA 240
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 241 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 285
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P ++H + P K G VI PTRELA+Q Y+E +
Sbjct: 271 GRDLIGIAKTGSGKTAAFVLPMMVHIMDQPELGKGEGPIGVICAPTRELAQQIYSEAKKF 330
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + E+F A +V++ TP +L+ +++M AL++ +L++
Sbjct: 331 AKVHGIRISGVYGGMSKFEQFKELKA-GCEVVVATPGRLIDMIKM--KALSMHRATYLVL 387
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT + V + R L +++ VG
Sbjct: 388 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPKRVERLAREILTDPIRVTVG 443
>gi|77461141|ref|YP_350648.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens Pf0-1]
gi|77385144|gb|ABA76657.1| putative ATP-dependent RNA helicase [Pseudomonas fluorescens Pf0-1]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 15/165 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVTANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R D+L+ TP +L+ L + + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDLLVATPGRLLDLFRQN--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
+DE+D++ + GF ++LA IY A P ++ +FSAT ++D+
Sbjct: 154 LDEADRMLDL---GFSEELANIYRAL--PKKRQTLLFSATFSDDI 193
>gi|115762569|ref|XP_792708.2| PREDICTED: ATP-dependent RNA helicase DDX54-like
[Strongylocentrotus purpuratus]
Length = 889
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAFL+P++ L R G RA+I+ PTRELA QT T L+
Sbjct: 110 GQDVVGMARTGSGKTAAFLLPMLERLQRRSAQSGARALILSPTRELALQTLKFTKELARY 169
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
LR+ VI + ++F + D+LI T +L++ L++MD L L VE+++ DE
Sbjct: 170 TDLRSEVILGGDRMDDQFAALH-ENPDILIATRGRLLHVLVEMD---LKLMQVEYVVFDE 225
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + N + +FSAT
Sbjct: 226 ADRLFEM---GFAEQLNEILSRLP-DNRQTLLFSAT 257
>gi|66812836|ref|XP_640597.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
gi|74897154|sp|Q54TJ4.1|DDX27_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx27; AltName:
Full=DEAD box protein 27
gi|60468614|gb|EAL66617.1| hypothetical protein DDB_G0281711 [Dictyostelium discoideum AX4]
Length = 783
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 103/179 (57%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ I A A TGSGKTAAFL+P++ L R + R +I+ PTRELA Q + L++
Sbjct: 227 GKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQ 286
Query: 107 GLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ + ++G + A++ R + DV+I TP +L+ L ++ + L ++E LI+D
Sbjct: 287 FSNITSCLIVGGLSNKAQEVELRKSP--DVVIATPGRLIDHL-LNAHGIGLDDLEILILD 343
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR--RVQIN 222
E+D+L + GF+D++ I +C N + +FSAT ++V + L++ RVQ++
Sbjct: 344 EADRLLDM---GFKDEINKIVESCP-TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVD 398
>gi|66911669|gb|AAH96848.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Danio rerio]
gi|182889788|gb|AAI65637.1| Ddx18 protein [Danio rerio]
Length = 653
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT AFLIP +I+ L+ P+N G +++ PTRELA QTY L
Sbjct: 198 GRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRN-GTGVIVLSPTRELAMQTYG---VL 253
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPALNLANVE 160
E + H G I + + AQK ++L+ TP +L+ LQ + P N++
Sbjct: 254 KELMTHHVHTYGLIMGGSNRSA--EAQKLANGVNILVATPGRLLDHLQ-NTPGFMFKNLQ 310
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRR 218
LI+DE+D++ E GF ++L I P ++ M FSAT T V R LK+
Sbjct: 311 CLIIDEADRILEV---GFEEELKQIIKLL--PKKRQSMLFSATQTRKVEDLARISLKKE 364
>gi|342884574|gb|EGU84781.1| hypothetical protein FOXB_04676 [Fusarium oxysporum Fo5176]
Length = 897
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT S G
Sbjct: 121 KDLVGMARTGSGKTAAFVIPMIERLRAHSARFGTRALILSPSRELAIQTLKVVKEFSRGT 180
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 181 DLKCVLLVGGDSLEEQFGSMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 236
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 237 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 281
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKF 315
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +V+I TP +L+ LL+M AL + +L+
Sbjct: 316 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEVVIATPGRLIDLLKMK--ALKMFRATYLV 371
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 372 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVTV 427
Query: 224 G 224
G
Sbjct: 428 G 428
>gi|51010913|ref|NP_001003411.1| ATP-dependent RNA helicase DDX18 [Danio rerio]
gi|49618963|gb|AAT68066.1| myc-regulated DEAD/H box 18 RNA helicase [Danio rerio]
Length = 653
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 94/179 (52%), Gaps = 21/179 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT AFLIP +I+ L+ P+N G +++ PTRELA QTY L
Sbjct: 198 GRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRN-GTGVIVLSPTRELAMQTYG---VL 253
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPALNLANVE 160
E + H G I + + AQK ++L+ TP +L+ LQ + P N++
Sbjct: 254 KELMTHHVHTYGLIMGGSNRSA--EAQKLANGVNILVATPGRLLDHLQ-NTPGFMFKNLQ 310
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRR 218
LI+DE+D++ E GF ++L I P ++ M FSAT T V R LK+
Sbjct: 311 CLIIDEADRILEV---GFEEELKQIIKLL--PKKRQSMLFSATQTRKVEDLARISLKKE 364
>gi|381188403|ref|ZP_09895965.1| ATP-dependent RNA helicase RhlE [Flavobacterium frigoris PS1]
gi|379650191|gb|EIA08764.1| ATP-dependent RNA helicase RhlE [Flavobacterium frigoris PS1]
Length = 428
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +PI+ L K+L RA+I+ PTRELA Q S
Sbjct: 38 GKDVLASAQTGTGKTAGFTLPILQILAEGKHLSHRPIRALILTPTRELAAQILANIKEYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
E L LR+ VI G + Q + R Q D+L+ TP +L+ L + L+ VE L++
Sbjct: 98 EFLDLRSTVIFGGVNQKPQVAQLR--QGIDILVATPGRLIDLQNQG--LITLSKVEILVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
DE+D++ + G +R + V+ NL MFSAT ++D+ K L + VQ+
Sbjct: 154 DEADRMLDMGFLRDIERIMKVL--PVKRQNL---MFSATFSKDIKKLAMGILHKPVQV 206
>gi|398855606|ref|ZP_10612087.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
gi|398230573|gb|EJN16591.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM80]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C PN ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFSEDVQRLVDEC--PNRQQTMLFSAT 185
>gi|319411502|emb|CBQ73546.1| related to DRS1-RNA helicase of the DEAD box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 101/185 (54%), Gaps = 20/185 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RG-PKNLGFRAVIVCPTRELAKQTYNETVR 103
G+ I A A TGSGKTAAF+IP + L +G + R +I+ PTRELA Q Y+
Sbjct: 370 GKDIVAGAVTGSGKTAAFMIPTLERLTWRAKGRAQEAKTRVLILAPTRELAIQCYSVGKS 429
Query: 104 LSEGLGLR-----AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
+++ +R + K Q+A K P +V+I TP +L+ ++ + + L +
Sbjct: 430 IAKFTDIRFCLCVGGLSVKSQEAELKLRP------EVVIATPGRLIDHVR-NSASFTLDD 482
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
VE L++DE+D++ E GF D+L I +C + +FSAT T+DV + R LKR
Sbjct: 483 VEILVMDEADRMLED---GFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKRP 539
Query: 219 VQINV 223
V++ V
Sbjct: 540 VRLFV 544
>gi|302758696|ref|XP_002962771.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
gi|300169632|gb|EFJ36234.1| hypothetical protein SELMODRAFT_165331 [Selaginella moellendorffii]
Length = 786
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFLIP++ LR PK G RA+I+ PTRELA QT+ L
Sbjct: 61 GNDVVAMARTGSGKTAAFLIPMLEKLRAHSPKP-GARALILSPTRELALQTFKFCKELGR 119
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR V+ +F + ++ D+LI TP +L++ L + ++L +VE+++ DE
Sbjct: 120 NTDLRITVLVGGDSMETQF-EQLSKNPDILIATPGRLMHHLS-EVEGMSLKSVEYVVFDE 177
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +QL I
Sbjct: 178 ADRLFEM---GFAEQLRQI 193
>gi|398925961|ref|ZP_10662200.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
gi|398171555|gb|EJM59457.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM48]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|334312364|ref|XP_001379053.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Monodelphis
domestica]
Length = 891
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 30/190 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 354 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 413
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL +++ Q+AA + GP D+LI TP +L+ L + P+
Sbjct: 414 QFSTVTTCLAVGGLDVKS------QEAALRAGP------DILIATPGRLIDHLH-NCPSF 460
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L+++E LI+DE+D++ + F +Q+ I CS + + +FSAT T++V
Sbjct: 461 HLSSIEVLILDEADRMLD---EYFEEQMKEIIQMCSH-HRQTMLFSATMTDEVKDLASVS 516
Query: 215 LKRRVQINVG 224
LK V+I V
Sbjct: 517 LKNPVRIFVN 526
>gi|384493436|gb|EIE83927.1| hypothetical protein RO3G_08632 [Rhizopus delemar RA 99-880]
Length = 711
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 32/188 (17%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
+G+ I A TGSGKTAAF+IPI+ L R + R +I+CPTRELA Q ++ V+ +
Sbjct: 252 MGKDICGGAATGSGKTAAFVIPILERLLYRPRQTPSTRVLILCPTRELAAQVHSAAVKFA 311
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
GL L K Q+ K P DV++ TP +L+ ++ +
Sbjct: 312 AYTDITFCLCVGGLSL------KTQEQELKLKP------DVVVATPGRLIDHVR-NTSGF 358
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRR 213
+L E L++DE+D++ E GF D+L I +C P ++ M FSAT T++V + R
Sbjct: 359 HLDACEILVMDEADRMLED---GFADELGEIVKSC--PKSRQTMLFSATMTDNVDQLIRM 413
Query: 214 KLKRRVQI 221
L V++
Sbjct: 414 SLHNPVRL 421
>gi|312084924|ref|XP_003144474.1| DEAD/DEAH box helicase [Loa loa]
gi|307760364|gb|EFO19598.1| DEAD/DEAH box helicase [Loa loa]
Length = 783
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 9/155 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ I A + TGSGKTAAF+IPI+ L+ G RA+I+ PTRELA QT+ L
Sbjct: 68 GKDIVAMSRTGSGKTAAFVIPILQKLKVRDMKGIRALIIEPTRELAIQTFIVVKELGRFT 127
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
GLR V+ + E+F +K D+++ TP +L++ +++MD L+ V+ ++ DE+
Sbjct: 128 GLRCAVLVGGDRIEEQFQA-VHEKPDIVVATPGRLLHVIVEMD---FRLSAVQIIVFDEA 183
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
D+LFE GF +QL + N + +FSAT
Sbjct: 184 DRLFEM---GFAEQLHEVLKRIP-ENRQTLLFSAT 214
>gi|443897915|dbj|GAC75254.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 909
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 100/183 (54%), Gaps = 20/183 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RG-PKNLGFRAVIVCPTRELAKQTYNETVR 103
G+ I A A TGSGKTAAF+IP I L +G + R +I+ PTRELA Q Y+
Sbjct: 355 GKDIVAGAVTGSGKTAAFMIPAIERLTWRAKGRAQEAKSRVLILAPTRELAIQCYSVGKS 414
Query: 104 LSEGLGLR-----AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
+++ +R + K Q+A K P +V+I TP +L+ ++ + + L +
Sbjct: 415 IAKFTDIRFCLCVGGLSVKSQEAELKLRP------EVVIATPGRLIDHVR-NSASFTLDD 467
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
+E L++DE+D++ E GF D+L I +C + +FSAT T+DV + R LKR
Sbjct: 468 IEILVMDEADRMLED---GFADELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKRP 524
Query: 219 VQI 221
V++
Sbjct: 525 VRL 527
>gi|303277179|ref|XP_003057883.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460540|gb|EEH57834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 532
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 7/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++H LR G RA+++ PTRELA QT+ LS+
Sbjct: 117 GADVVAMARTGSGKTAAFLIPVLHKLRAHSLKAGARAIVLSPTRELALQTFKFAQELSKF 176
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR I +F A D+ + TP +L++ ++ + L + +V+ +++DE+
Sbjct: 177 TDLRCVCIVGGDSMEAQF-EDLATNPDLYVATPGRLLHHVE-EIDGLTIRSVQHVVLDEA 234
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+L E GF DQL I S + +FSAT +A++ R L+
Sbjct: 235 DRLLEM---GFSDQLRDIMRQVSDVR-QTLLFSATMPSQLAEFVRVGLR 279
>gi|346642808|ref|YP_258676.2| DEAD/DEAH box helicase [Pseudomonas protegens Pf-5]
gi|341579950|gb|AAY90832.2| DEAD/DEAH box helicase domain protein [Pseudomonas protegens Pf-5]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
+ L Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 M--LEQLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|149063450|gb|EDM13773.1| similar to ATP-dependent RNA-helicase (predicted) [Rattus
norvegicus]
Length = 297
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 96/166 (57%), Gaps = 10/166 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+D+LFE GF +QL I G + + +FSAT + + ++ R
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSATLPKLLVEFAR 289
>gi|398891184|ref|ZP_10644598.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
gi|398187211|gb|EJM74560.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM55]
Length = 446
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C PN ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSAT 185
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 15/182 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKF 315
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKF--DVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ LR + I KF K +++I TP +L+ LL+M AL + +L
Sbjct: 316 AKPYNLR---VAAIYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKM--KALKMFRATYL 370
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++
Sbjct: 371 VLDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVT 426
Query: 223 VG 224
VG
Sbjct: 427 VG 428
>gi|225451679|ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
vinifera]
Length = 540
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 16/184 (8%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH---SLR---GPKNLGFRAVIVCPTRELAKQTYNET 101
+G+ + A TGSGKTA+FL+PI+ S+R P A+++ PTREL Q +
Sbjct: 173 VGKNLLVSADTGSGKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQA 232
Query: 102 VRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
L +GL + A V+G A + R Q ++++ TP +L+ LL + L +V
Sbjct: 233 KLLGKGLPFKTALVVGG--DAMPRQLHRIQQGVELIVGTPGRLIDLLSKH--EIELDDVF 288
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
L++DE D + E RGFRDQ+ IY A S P + M+SAT +++V K K +
Sbjct: 289 MLVLDEVDCMLE---RGFRDQVMQIYRALSQPQVL--MYSATISQEVEKVASSMAKDIIV 343
Query: 221 INVG 224
I+VG
Sbjct: 344 ISVG 347
>gi|158287566|ref|XP_309566.4| AGAP011084-PA [Anopheles gambiae str. PEST]
gi|157019713|gb|EAA05253.5| AGAP011084-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
+GR I CA TG+GKTAA+++P I L N+ R +++ PTREL Q Y +L
Sbjct: 210 MGRDICGCAATGTGKTAAYMLPTIERLLYKPNVAQAVTRVLVLVPTRELGAQVYQVAKQL 269
Query: 105 SEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ + + IG K Q+A + P DV+I TP +L+ ++ + P+ +L ++
Sbjct: 270 TQFTNVDVGIAIGGLDVKAQEAVLRKNP------DVVIATPGRLIDHIK-NTPSFSLDSI 322
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
E LI+DE+D++ + F +Q+ I +CS + +FSAT TE+V LK+ V
Sbjct: 323 EILILDEADRMLD---EYFAEQMKEIIRSCSATR-QTMLFSATMTEEVKDLAAVSLKKPV 378
Query: 220 QI 221
+I
Sbjct: 379 KI 380
>gi|407831412|gb|EKF98153.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 763
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 95/159 (59%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP+++ L+ K +G R +++ PTREL+ Q ++L +
Sbjct: 4 GSDVVAMARTGSGKTAAFLIPMLNLLKSHSKTVGIRGLVLAPTRELSLQILRFGIQLDKF 63
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G ++Q E G D+++ TP +L+++ M+ +L L+ V+ L++
Sbjct: 64 LDLRFAALVGGNSLEQQFELLGSNP----DIVVATPGRLLHI--MEEASLKLSMVKCLVL 117
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRGMFSAT 202
DE+D+LFE G+ Q ++ P+ +R +FSAT
Sbjct: 118 DEADRLFELGL-----QPQIVAVMQKVPDACQRALFSAT 151
>gi|355564704|gb|EHH21204.1| hypothetical protein EGK_04216 [Macaca mulatta]
Length = 790
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 10/177 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE GF +QL I A G + + +FSAT + + ++ R L V I +
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 301
>gi|143456026|sp|Q0E2Z7.2|RH41_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 41
gi|46390396|dbj|BAD15860.1| putative DEAD box [Oryza sativa Japonica Group]
gi|215701515|dbj|BAG92939.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767715|dbj|BAG99943.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 536
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPII------HSLRGPKNLGFRAVIVCPTRELAKQTYNETVR 103
R + A TGSGKTA+FL+PII S R G A+++ PTREL Q +
Sbjct: 175 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKV 234
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L +GL + A V+G A + + R ++++ TP +L+ LL ++L V+
Sbjct: 235 LGKGLPFKTALVVGGDPLAQQIY--RIENGIELIVGTPGRLIDLLMKH--NVDLNKVDVF 290
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE D L E RGFRDQ+ I+ A S P + MFSAT +V K K + I+
Sbjct: 291 VLDEVDCLLE---RGFRDQVMQIFQALSHPQVM--MFSATVNSEVEKMSNSLAKNAIHIS 345
Query: 223 VG 224
G
Sbjct: 346 CG 347
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P+I + + LG VI PTRELA+Q +NE+ +
Sbjct: 220 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQEELGKGEGPIGVICAPTRELAQQIFNESRKF 279
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + ++F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 280 AKPYGIRVSGVFGGMSKLDQFKELKA-GCEIVVATPGRLIDMLKM--KALTMFRATYLVL 336
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V R L V++ G
Sbjct: 337 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRRVETLAREVLSAPVRVTAG 392
>gi|222622384|gb|EEE56516.1| hypothetical protein OsJ_05798 [Oryza sativa Japonica Group]
Length = 648
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPII------HSLRGPKNLGFRAVIVCPTRELAKQTYNETVR 103
R + A TGSGKTA+FL+PII S R G A+++ PTREL Q +
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKV 279
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L +GL + A V+G A + + R ++++ TP +L+ LL ++L V+
Sbjct: 280 LGKGLPFKTALVVGGDPLAQQIY--RIENGIELIVGTPGRLIDLLMKH--NVDLNKVDVF 335
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE D L E RGFRDQ+ I+ A S P + MFSAT +V K K + I+
Sbjct: 336 VLDEVDCLLE---RGFRDQVMQIFQALSHPQVM--MFSATVNSEVEKMSNSLAKNAIHIS 390
Query: 223 VG 224
G
Sbjct: 391 CG 392
>gi|218190271|gb|EEC72698.1| hypothetical protein OsI_06281 [Oryza sativa Indica Group]
Length = 648
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPII------HSLRGPKNLGFRAVIVCPTRELAKQTYNETVR 103
R + A TGSGKTA+FL+PII S R G A+++ PTREL Q +
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKV 279
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L +GL + A V+G A + + R ++++ TP +L+ LL ++L V+
Sbjct: 280 LGKGLPFKTALVVGGDPLAQQIY--RIENGIELIVGTPGRLIDLLMKH--NVDLNKVDVF 335
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE D L E RGFRDQ+ I+ A S P + MFSAT +V K K + I+
Sbjct: 336 VLDEVDCLLE---RGFRDQVMQIFQALSHPQVM--MFSATVNSEVEKMSNSLAKNAIHIS 390
Query: 223 VG 224
G
Sbjct: 391 CG 392
>gi|213402583|ref|XP_002172064.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
gi|212000111|gb|EEB05771.1| ATP-dependent RNA helicase dbp10 [Schizosaccharomyces japonicus
yFS275]
Length = 854
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 12/171 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKTAAF+IP+I L+ + G RA+I+ P+RELA QT S+
Sbjct: 102 GRDVVGMARTGSGKTAAFVIPMIEKLKASRAQSGSRAIILSPSRELALQTMKVVKDFSKD 161
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR VI + E+F + K D+++ TP + ++L ++M L L ++E+++ DE
Sbjct: 162 TNLRTAVIVGGEGLEEQFSILT-NKPDIIVATPGRFLHLKVEM---KLELGSIEYVVFDE 217
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL I P+ ++ +FSAT +++ ++ + L+
Sbjct: 218 ADRLFEM---GFAAQLTEILHGL--PSSRQTLLFSATLPKNLVEFAKAGLQ 263
>gi|296808523|ref|XP_002844600.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
gi|238844083|gb|EEQ33745.1| ATP-dependent RNA helicase ROK1 [Arthroderma otae CBS 113480]
Length = 740
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 31/203 (15%)
Query: 51 QIFACAPTGSGKTAAFLIPII-----HSLRGPKNL--GFRAVIVCPTRELAKQTYNETVR 103
+ APTGSGKT AF+IP+I H + P + G RA++V PT+ELA Q NE +
Sbjct: 255 DLLTVAPTGSGKTLAFMIPLISKIMKHRHQNPSDQSKGIRAIVVAPTKELASQIANEGRK 314
Query: 104 LSEGL---------------GLRAHVIGKIQQAAEKFGPR---SAQKFDVLITTPNKLVY 145
L+ G+ G ++ K P+ + K D+LITTP +LV
Sbjct: 315 LALGMRVVEERGGESMKKGDGTSDDSDADSEEERPKEQPKPLATVTKSDILITTPLQLVN 374
Query: 146 LLQMDPPAL--NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATH 203
L + + ++ V L++DE+D L + FRDQ I+ +C P L+ G++SAT
Sbjct: 375 ALSDNGHKVLASMPLVRSLVLDEADVLLDP---LFRDQTLSIWRSCVNPRLRVGLWSATM 431
Query: 204 TEDVAKWCRRKLKRRVQINVGLR 226
++ + + + R Q ++GL+
Sbjct: 432 GSNIEELAKSTIGER-QKSLGLK 453
>gi|229591936|ref|YP_002874055.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
gi|229363802|emb|CAY51237.1| ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
Length = 456
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 45 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 104
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 105 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 156
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF D + + A C N ++ M FSAT
Sbjct: 157 LVLDEADRMLDM---GFADDVQRLVAECI--NRQQTMLFSAT 193
>gi|398963567|ref|ZP_10679679.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
gi|398149569|gb|EJM38213.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM30]
Length = 446
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|302758194|ref|XP_002962520.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
gi|300169381|gb|EFJ35983.1| hypothetical protein SELMODRAFT_438217 [Selaginella moellendorffii]
Length = 821
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 8/139 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFLIP++ LR PK G RA+I+ PTRELA QT+ L
Sbjct: 90 GNDVVAMARTGSGKTAAFLIPMLEKLRAHSPKP-GARALILSPTRELALQTFKFCKELGR 148
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR V+ +F + ++ D+LI TP +L++ L + ++L +VE+++ DE
Sbjct: 149 NTDLRITVLVGGDSMETQF-EQLSKNPDILIATPGRLMHHLS-EVEGMSLKSVEYVVFDE 206
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +QL I
Sbjct: 207 ADRLFEM---GFAEQLRQI 222
>gi|71649079|ref|XP_813297.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70878168|gb|EAN91446.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 903
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP+++ L+ K +G R +++ PTREL+ Q ++L++
Sbjct: 144 GSDVVAMARTGSGKTAAFLIPMLNLLKSHSKTVGIRGLVLAPTRELSLQILRFGIQLNKF 203
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G ++Q E G D+++ TP +L+++ M+ +L L+ V+ L++
Sbjct: 204 LDLRFAALVGGNSLEQQFELLGSNP----DIVVATPGRLLHI--MEEASLKLSMVKCLVL 257
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPN-LKRGMFSAT 202
DE+D+LFE G+ Q ++ P+ +R +FSAT
Sbjct: 258 DEADRLFELGL-----QPQIVAVMQKVPDACQRALFSAT 291
>gi|328781928|ref|XP_397101.4| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis mellifera]
Length = 772
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A A TGSGKTA FLIP+ L+ +G RA+I+ PTRELA QT L
Sbjct: 73 GRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQTLKFIKELGRF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+A +I +F D+LI TP + +++ ++MD L L N+E+++ DE
Sbjct: 133 TGLKATIILGGDNMENQFSAIHGNP-DILIATPGRFLHICIEMD---LQLNNIEYVVFDE 188
Query: 167 SDKLFEAG 174
+D+LFE G
Sbjct: 189 ADRLFEMG 196
>gi|398978205|ref|ZP_10687628.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
gi|398137316|gb|EJM26378.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM25]
Length = 446
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 14/180 (7%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVR 103
LG+ I A TGSGKTAAF+IP++ L +G + R +I+ PTRELA Q Y R
Sbjct: 210 LGKDIVGNAVTGSGKTAAFMIPMLERLLYREKGKRAAATRCLILLPTRELAVQCYEVGKR 269
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L ++ ++G + A++ R Q+ DV++ TP +L+ ++ + NL +++ L
Sbjct: 270 LGAHTDIQFCLLVGGLSLKAQEAALR--QRPDVVLATPGRLIDHVR-NSVGFNLDSLDIL 326
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ GF D+L I AC P ++ M FSAT T+ V + + L + V++
Sbjct: 327 VLDEADRMLS---EGFADELTEIIKAC--PKSRQTMLFSATMTDSVDELIKMSLNKPVRL 381
>gi|307109616|gb|EFN57854.1| hypothetical protein CHLNCDRAFT_6836, partial [Chlorella
variabilis]
Length = 461
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 27/188 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P I+H + P K G VIV PTRELA+Q + ET R
Sbjct: 100 GRDVLGIAKTGSGKTAAFVLPMIVHIMDQPELQKGEGPIGVIVAPTRELAEQIHKETRRF 159
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA-QKF-------DVLITTPNKLVYLLQMDPPALNL 156
S +A+ +G A FG S Q+F +V + TP +++ L++M A N+
Sbjct: 160 S-----KAYNLG----VAAAFGGLSKHQQFKDLKAGCEVAVCTPGRMIDLIRM--KACNM 208
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+L+ DE+D++F+ GF Q+ I P+ + +FSAT V + L
Sbjct: 209 KRATYLVFDEADRMFDM---GFEPQVRSIMGQIR-PDRQTLLFSATMPRKVERLAGDALT 264
Query: 217 RRVQINVG 224
V+I VG
Sbjct: 265 SPVRITVG 272
>gi|412988365|emb|CCO17701.1| predicted protein [Bathycoccus prasinos]
Length = 497
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 100/196 (51%), Gaps = 24/196 (12%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL------------RGPKNLGFRAVIVCPTRE 92
+S GR + ACA TGSGKTAAF PII + RG K L A+++ PTRE
Sbjct: 81 ISLAGRDLMACAQTGSGKTAAFCFPIICGILNRGLLTGGGGQRGRKTLPL-ALVLSPTRE 139
Query: 93 LAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDP 151
LA Q + E + + G RA V+ AAE+F R ++ D+LI TP +L+ L+ D
Sbjct: 140 LAIQIHEEARKFAYKTGCRAVVVYGGAPAAEQF--REMERGCDILIATPGRLIDLI--DR 195
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL---KRGMFSATHTEDVA 208
+ LA E+L +DE+D++ + GF Q+ + P + +FSAT +++
Sbjct: 196 AKVGLAKCEYLALDEADRMLDM---GFEPQIRQLVEQRDMPRTGERQTMLFSATFPKEIQ 252
Query: 209 KWCRRKLKRRVQINVG 224
+ L V + VG
Sbjct: 253 RMASDFLHDYVFLTVG 268
>gi|256074321|ref|XP_002573474.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353228911|emb|CCD75082.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 829
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 11/166 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + + A TGSGKTAAFLIP+ G RA+I+ PTRELA QT N T L +
Sbjct: 67 GRDVVSMARTGSGKTAAFLIPLFEKFPCHSPAGPRALIMSPTRELAIQTLNFTKELGKFT 126
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
L+A +I + E+F D++I TP + ++ L++M+ L+L ++E+++ DE
Sbjct: 127 PLKATIILGGDKMEEQFAALHKSP-DIIIATPGRFLHVLMEMN---LSLKSIEYVVFDEG 182
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCR 212
D+LFE GF +QL+ P ++ + FSAT +++ ++ R
Sbjct: 183 DRLFEL---GFAEQLSETLKRL--PRSRQTLIFSATLPKNLVEFAR 223
>gi|322795050|gb|EFZ17898.1| hypothetical protein SINV_07122 [Solenopsis invicta]
Length = 725
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 25/187 (13%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-----LRGPKNLGFRAVIVCPTRELAKQTYNETV 102
+GR I CA TG+GKTAA+++P++ L GP R +++ PTREL Q Y T
Sbjct: 195 MGRDICGCAATGTGKTAAYMLPVLERLLYRPLDGPAI--SRVLVLVPTRELGVQVYQVTK 252
Query: 103 RLSE------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+L++ GL + + KIQ+ + P D++I TP +L+ L+ + P +L
Sbjct: 253 QLAQFTTVEVGLSVGGLDV-KIQEGVLRKNP------DIVIATPGRLIDHLR-NAPTFSL 304
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
++E LI+DE+D++ + F +Q+ I CS + +FSAT TE+V L
Sbjct: 305 DSIEVLILDEADRMLD---EYFAEQMKYIVKQCSRTR-QTILFSATMTEEVKDLAAVSLD 360
Query: 217 RRVQINV 223
+ ++I V
Sbjct: 361 KPIKIFV 367
>gi|340372235|ref|XP_003384650.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Amphimedon queenslandica]
Length = 598
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETV 102
L+ +G+ I ACA TG+GKTAAF++PI+ L R + R +I+ PTRELA Q ++
Sbjct: 178 LALMGKDICACAATGTGKTAAFMLPILERLLYRPTRMRSTRVLILLPTRELAIQVHSVGK 237
Query: 103 RLSEGLGLR-----AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L++ + + G+ Q+A+ + P D++I TP +LV L + P+ +L
Sbjct: 238 ALAQNTKIDLCLAAGGLEGRSQEASLRKSP------DIVIATPGRLVDHLH-NTPSFSLQ 290
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+E L++DE+D++ + F DQ+ I C P ++ +FSAT T++V + R L
Sbjct: 291 AIEILVLDEADRMLD---EHFLDQMNEIIRLC--PVSRQTLLFSATMTDEVEELARLSLH 345
Query: 217 RRVQINVG 224
V++ V
Sbjct: 346 NPVRVFVD 353
>gi|46136501|ref|XP_389942.1| hypothetical protein FG09766.1 [Gibberella zeae PH-1]
gi|91206536|sp|Q4HZ42.1|DBP10_GIBZE RecName: Full=ATP-dependent RNA helicase DBP10
Length = 897
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT S G
Sbjct: 120 KDLVGMARTGSGKTAAFVIPMIEKLRAHSARFGTRALIMSPSRELAIQTLKVVKEFSRGT 179
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 180 DLKCVLLVGGDSLEEQFGYMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 235
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 236 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 280
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
G I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 268 GGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKF 327
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
S+ GLR + K Q E K G ++++ TP +L+ ++++ AL ++
Sbjct: 328 SKAHGLRVSAVYGGMSKFDQLKELKAG------CEIVVATPGRLIDMIKL--KALTMSKA 379
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++F+ GF Q+ I P+ + +FSAT V K R L V
Sbjct: 380 TYLVLDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILTDPV 435
Query: 220 QINVG 224
++ VG
Sbjct: 436 RVTVG 440
>gi|77457664|ref|YP_347169.1| DEAD/DEAH box helicase-like protein [Pseudomonas fluorescens Pf0-1]
gi|77381667|gb|ABA73180.1| ATP-dependent RNA helicase [Pseudomonas fluorescens Pf0-1]
Length = 446
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|408398412|gb|EKJ77543.1| hypothetical protein FPSE_02293 [Fusarium pseudograminearum CS3096]
Length = 897
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT S G
Sbjct: 120 KDLVGMARTGSGKTAAFVIPMIEKLRAHSARFGTRALIMSPSRELAIQTLKVVKEFSRGT 179
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 180 DLKCVLLVGGDSLEEQFGYMAANP-DIVIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 235
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 236 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 280
>gi|281343478|gb|EFB19062.1| hypothetical protein PANDA_014817 [Ailuropoda melanoleuca]
Length = 819
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 76 GKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELALQTMKFTKELGKF 135
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GLR +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 136 TGLRTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LRLQSVEYVVFDE 191
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + G + + +FSAT
Sbjct: 192 ADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 223
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P+I + + LG VI PTRELA+Q +NE+ +
Sbjct: 220 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQEELGKGEGPIGVICAPTRELAQQIFNESRKF 279
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
++ G+R + ++F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 280 AKPYGIRVSGVFGGMSKLDQFKELKA-GCEIVVATPGRLIDMLKM--KALTMFRATYLVL 336
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ GF Q+ I P+ + +FSAT V R L V++ G
Sbjct: 337 DEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRRVETLAREVLSAPVRVTAG 392
>gi|453086687|gb|EMF14729.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 687
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 102/190 (53%), Gaps = 21/190 (11%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTY 98
+ PL G+ + A TGSGKT AFLIP ++H+LR P+N G ++V PTRELA Q +
Sbjct: 240 MGPLLAGKDVLGAAKTGSGKTLAFLIPCVELLHALRFKPRN-GTGVIVVSPTRELALQIF 298
Query: 99 NETVRL----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
L S+ G+ VIG + AE + A+ ++LI TP +L+ LQ +
Sbjct: 299 GVARELMEHHSQTFGI---VIGGANRRAE--AEKLAKGVNLLIATPGRLLDHLQ-NTQGF 352
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
NV+ L++DE+D++ E GF D++ I + + +FSAT T VA R
Sbjct: 353 VFKNVKALVIDEADRILEV---GFEDEMRQIVKILPKEDRQTMLFSATQTTKVADLARVS 409
Query: 215 LKRR-VQINV 223
L+ R + INV
Sbjct: 410 LRERPLYINV 419
>gi|448528530|ref|XP_003869731.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis Co 90-125]
gi|380354084|emb|CCG23598.1| Drs1 nucleolar DEAD-box protein [Candida orthopsilosis]
Length = 632
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 98/178 (55%), Gaps = 12/178 (6%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKTAA+LIP+I L + +A+I+ PTRELA Q Y+ +L +
Sbjct: 189 LGKDIVAGAQTGSGKTAAYLIPLIERLIFKNSTSTKAIILAPTRELAIQVYDVGRKLGQF 248
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L V G ++Q ++ R D++I TP +L+ ++ + P+ ++ +V+ L+
Sbjct: 249 VKNLSFGLAVGGLNLRQQEQQLKSRP----DIVIATPGRLIDHIR-NSPSFSVEDVQVLV 303
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+++L I + + +FSAT V + L + V++
Sbjct: 304 IDEADRMLE---EGFQEELTEILSLIPKQKRQTLLFSATMNTKVQDLVQLSLNKPVRV 358
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + + L G +VI+ PTRELA Q E +
Sbjct: 398 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKF 457
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 458 SKPLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLGANSGRVTNLRRV 512
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 513 TYVVLDEADRMFDM---GFEPQVMRIIDNVR-PDRQTVMFSATFPRAMEALARRILSKPL 568
Query: 220 QINVGLR 226
+I VG R
Sbjct: 569 EIQVGGR 575
>gi|447918451|ref|YP_007399019.1| putative ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
gi|445202314|gb|AGE27523.1| putative ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
Length = 445
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ L GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLMMEGPKVAANSARALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R D+L+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQNLPLTTYAVYGGVSINPQMMKLRKG--VDILVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++++ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDEIRTLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|15226155|ref|NP_180929.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
gi|75319077|sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|1707017|gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|17473908|gb|AAL38370.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|20259792|gb|AAM13243.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|330253781|gb|AEC08875.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
Length = 733
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 345 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQ 404
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
ETV+ + LG R ++G Q+ E+ G + Q +++I TP +L+ L+ LN
Sbjct: 405 IEEETVKFAHYLGFRVTSIVGG--QSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLN 462
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+A + A NLK MF
Sbjct: 463 QCN--YVVLDEADRMIDM---GFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMF 517
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 518 SATMPPGVERLARKYLRNPVVVTIG 542
>gi|68473179|ref|XP_719395.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|74656492|sp|Q5ACK7.1|DRS1_CANAL RecName: Full=ATP-dependent RNA helicase DRS1
gi|46441210|gb|EAL00509.1| hypothetical protein CaO19.7635 [Candida albicans SC5314]
gi|238880416|gb|EEQ44054.1| hypothetical protein CAWG_02313 [Candida albicans WO-1]
Length = 613
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 16/182 (8%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKT A++IPII L + + +I+ PTRELA Q Y +LS
Sbjct: 166 LGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHH 225
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L + V G ++Q E+ R D++I TP +L+ ++ + P+ ++ +++ L+
Sbjct: 226 VNNLNIGLAVGGLNLRQQEEQLKTRP----DIVIATPGRLIDHIR-NSPSFSVQDIQVLV 280
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+D+L I + P KR +FSAT + + L++ V+I
Sbjct: 281 IDEADRMLE---EGFQDELTEILSLI--PKHKRQTLLFSATMNTRIQDLIQLSLQKPVRI 335
Query: 222 NV 223
+
Sbjct: 336 MI 337
>gi|424921971|ref|ZP_18345332.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
gi|404303131|gb|EJZ57093.1| Superfamily II DNA and RNA helicase [Pseudomonas fluorescens R124]
Length = 446
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C PN ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSAT 185
>gi|398985369|ref|ZP_10691023.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
gi|399014054|ref|ZP_10716350.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398111891|gb|EJM01765.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398154210|gb|EJM42690.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
Length = 446
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C PN ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDEC--PNRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|336373869|gb|EGO02207.1| hypothetical protein SERLA73DRAFT_178026 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386778|gb|EGO27924.1| hypothetical protein SERLADRAFT_462194 [Serpula lacrymans var.
lacrymans S7.9]
Length = 449
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 15/180 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ I A TGSGKTAAF +PI+ L PK G A ++ PTRELA Q + L
Sbjct: 52 GKDIIGVASTGSGKTAAFALPILQKLWEEPK--GLFACVLAPTRELAYQISQQFESLGSD 109
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+R A ++G + + A+K V++ TP +L++ LQ + LAN+++L++DE
Sbjct: 110 MGVRCAVIVGGVPTVPQAVA--LAKKPHVVVATPGRLLWHLQ-ETKGFGLANLKFLVLDE 166
Query: 167 SDKLFEAGV-RGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D+L + + D L VI P + +FSAT T VAK R LK V++ V
Sbjct: 167 ADRLLDMDFGQVIDDILKVI------PKQRTTYLFSATMTSKVAKLQRASLKNPVRVEVA 220
>gi|167622797|ref|YP_001673091.1| ATP-dependent RNA helicase SrmB [Shewanella halifaxensis HAW-EB4]
gi|167352819|gb|ABZ75432.1| DEAD/DEAH box helicase domain protein [Shewanella halifaxensis
HAW-EB4]
Length = 411
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 93/180 (51%), Gaps = 17/180 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRA--VIVCPTRELAKQTYNETVRLSE 106
R I A APTG+GKTA+FL+P + H L P+ G RA +I+ PTRELA Q + L+
Sbjct: 42 RDILARAPTGTGKTASFLLPALQHLLDFPRRYGGRARVLILTPTRELASQIHRYASHLAT 101
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSA---QKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
GLGL +I +GP+ + D+L+ TP +L+ L D N VE LI
Sbjct: 102 GLGLDTVII----TGGVPYGPQEEALQKNVDILVATPGRLMEYL--DKGHFNAEEVEVLI 155
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT-HTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + G + +A+ S + +FSAT DV ++ L V++
Sbjct: 156 IDEADRMLDMGFSAVVETIAI----ESVGRKQTMLFSATLEGSDVGRFSHELLTNPVKLE 211
>gi|447917697|ref|YP_007398265.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
gi|445201560|gb|AGE26769.1| ATP-dependent RNA helicase [Pseudomonas poae RE*1-1-14]
Length = 448
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVSECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|297826827|ref|XP_002881296.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
gi|297327135|gb|EFH57555.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 343 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQ 402
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
ETV+ + LG R ++G Q+ E+ G + Q +++I TP +L+ L+ LN
Sbjct: 403 IEEETVKFAHYLGFRVTSIVGG--QSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLN 460
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+A + A NLK MF
Sbjct: 461 QCN--YVVLDEADRMIDM---GFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMF 515
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 516 SATMPPGVERLARKYLRNPVVVTIG 540
>gi|301779842|ref|XP_002925338.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Ailuropoda
melanoleuca]
Length = 863
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 120 GKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELALQTMKFTKELGKF 179
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GLR +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 180 TGLRTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LRLQSVEYVVFDE 235
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + G + + +FSAT
Sbjct: 236 ADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 267
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
G I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 271 GGDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLECKKF 330
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
S+ GLR + K Q E K G ++++ TP +L+ ++++ AL ++
Sbjct: 331 SKAHGLRVSAVYGGMSKFDQLKELKAG------CEIVVATPGRLIDMIKL--KALTMSKA 382
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++F+ GF Q+ I P+ + +FSAT V K R L V
Sbjct: 383 TYLVLDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPRKVEKLAREILTDPV 438
Query: 220 QINVG 224
++ VG
Sbjct: 439 RVTVG 443
>gi|302388236|ref|YP_003824058.1| DEAD/DEAH box helicase [Clostridium saccharolyticum WM1]
gi|302198864|gb|ADL06435.1| DEAD/DEAH box helicase domain protein [Clostridium saccharolyticum
WM1]
Length = 471
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 18/183 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-----LGFRAVIVCPTRELAKQTYNETVR 103
GR + CA TG+GKTAAF IP I LR K RA+IV PTRELA Q Y
Sbjct: 38 GRDLLGCAQTGTGKTAAFAIPTIQLLREEKESHGAKQNIRALIVTPTRELALQIYESFNT 97
Query: 104 LSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ L+ V+ G + Q ++ + Q+ D+L+ TP +L+ L+ D +N+ +++ L
Sbjct: 98 YGKFTDLKCCVVFGGVSQKPQE--EKLKQRVDILVATPGRLLALI--DQKIVNIDHIKIL 153
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQ 220
I+DE+D++ + GF + I A LK+ +FSAT D+AK LK +
Sbjct: 154 ILDEADRMLDM---GFIHDVKKIIARTP---LKKQTLLFSATMPPDIAKLAGTILKAPAK 207
Query: 221 INV 223
I +
Sbjct: 208 IEI 210
>gi|440736789|ref|ZP_20916374.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
gi|440382721|gb|ELQ19213.1| ATP-dependent RNA helicase [Pseudomonas fluorescens BRIP34879]
Length = 448
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVSECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|388546779|ref|ZP_10150051.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
gi|388275103|gb|EIK94693.1| DEAD/DEAH box helicase-like protein [Pseudomonas sp. M47T1]
Length = 445
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 19/165 (11%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETV 102
L+ GR + A TGSGKTAAF++PI++ L GP + RAVI+ PTRELA+QT E
Sbjct: 33 LAVQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVEIRAVILLPTRELAQQTLKEVE 92
Query: 103 RLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
R S+ +++ +I K+Q A + P D+LI TP +L L ++ L+L+
Sbjct: 93 RFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRL--LEHLNAGNLDLS 144
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
VE L++DE+D++ + GF + + + C + +FSAT
Sbjct: 145 KVEVLVLDEADRMLDM---GFSEDVTRLSEECK-DRAQTLLFSAT 185
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKF 315
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +V+I TP +L+ LL+M AL + +L+
Sbjct: 316 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEVVIATPGRLIDLLKMK--ALKMFRATYLV 371
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P + +FSAT V + R L +++ V
Sbjct: 372 LDEADRMFDL---GFEPQIRSIVGQIR-PGRQTLLFSATMPYKVERLAREILTDPIRVTV 427
Query: 224 G 224
G
Sbjct: 428 G 428
>gi|334183955|ref|NP_177829.5| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
gi|75318355|sp|O49289.1|RH29_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 29
gi|2829912|gb|AAC00620.1| Similar ATP-dependent RNA Helicase [Arabidopsis thaliana]
gi|332197806|gb|AEE35927.1| DEAD-box helicase domain-containing protein [Arabidopsis thaliana]
Length = 845
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFLIP++ L+ P+ G RA+I+ PTR+LA+QT T L +
Sbjct: 65 GVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQG-GVRALILSPTRDLAEQTLKFTKELGK 123
Query: 107 GLGLRAHVIGKIQQAAEKF-----GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
LR ++ ++F GP DV+I TP +L++LL + + L VE+
Sbjct: 124 FTDLRVSLLVGGDSMEDQFEELTKGP------DVIIATPGRLMHLLS-EVDDMTLRTVEY 176
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
++ DE+D LF G+ GF +QL I S N + +FSAT +A++ + L+
Sbjct: 177 VVFDEADSLF--GM-GFAEQLHQILTQLS-ENRQTLLFSATLPSALAEFAKAGLR 227
>gi|293603664|ref|ZP_06686084.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
gi|292817932|gb|EFF76993.1| ATP-dependent RNA helicase RhlE [Achromobacter piechaudii ATCC
43553]
Length = 493
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q +
Sbjct: 54 GRDVMGAAQTGTGKTAAFTVPILHRLMPLANASASPARHPVRALILTPTRELADQVFESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S+ LR+ V+ G + +K R + ++L+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSKQTPLRSAVVFGGVDIGPQKEALR--RGCEILVATPGRL--LDHVEQKNVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L + V
Sbjct: 170 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNQPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|302895429|ref|XP_003046595.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727522|gb|EEU40882.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 897
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT G
Sbjct: 123 KDLVGMARTGSGKTAAFVIPMIERLRAHSARFGTRALILSPSRELAIQTLKVVKEFGRGT 182
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ ++ E+FG +A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 183 DLKSVLLVGGDSLEEQFGYMAANP-DIVIATPGRFLHLKVEM---SLDLSSIQYVVFDEA 238
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 239 DRLFEM---GFAAQLTEILHALP-PSRQSLLFSATLPASLVEFARAGLQ 283
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ PI+ + K L G AVIVCPTREL +Q ++E R
Sbjct: 287 GRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRF 346
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 347 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVTY 400
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK---RR 218
L+ DE+D++F+ GF Q+ I A P+ + +FSAT + + K R L R
Sbjct: 401 LVFDEADRMFDM---GFEYQVRSI-ANHVRPDRQTLLFSATFRKKIEKLARDILVDPIRV 456
Query: 219 VQINVG 224
VQ ++G
Sbjct: 457 VQGDIG 462
>gi|154418331|ref|XP_001582184.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916417|gb|EAY21198.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 640
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 101/186 (54%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGPKNLGFR--AVIVCPTRELAKQTYNETVRLS 105
GR I CA TGSGKT AF+IP ++H L P + AVI+ PTRELA QT+ E ++
Sbjct: 138 GRDIIGCAVTGSGKTLAFIIPCLLHVLAQPPTGQYEAAAVILSPTRELAYQTHIECQKIF 197
Query: 106 EGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + A ++G + Q A K G +V+I TP + + LL A N+ V
Sbjct: 198 SLMDKKSACLVGGNDIENQLRAIKNGS------NVIIATPGRFIDLLS--SSAFNIKKVS 249
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
+L++DE+D++F+ GF Q+ I A + + MFSAT V + R+ L+ ++
Sbjct: 250 YLVIDEADRMFDL---GFEPQVIRI-AERMRKDRQTLMFSATFPHTVERIARKLLQNSIE 305
Query: 221 INVGLR 226
I VGLR
Sbjct: 306 IVVGLR 311
>gi|297842471|ref|XP_002889117.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
gi|297334958|gb|EFH65376.1| hypothetical protein ARALYDRAFT_316620 [Arabidopsis lyrata subsp.
lyrata]
Length = 834
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 19/175 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFLIP++ L+ P+ G RA+I+ PTR+LA+QT T L +
Sbjct: 65 GVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQG-GVRALILSPTRDLAEQTLKFTKELGK 123
Query: 107 GLGLRAHVIGKIQQAAEKF-----GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
LR ++ ++F GP DV+I TP +L++LL + + L VE+
Sbjct: 124 FTDLRVSLLVGGDSMEDQFEELTKGP------DVIIATPGRLMHLLS-EVDDMTLRTVEY 176
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
++ DE+D LF G+ GF +QL I S N + +FSAT +A++ + L+
Sbjct: 177 VVFDEADSLF--GM-GFAEQLHQILTQLS-ENRQTLLFSATLPSALAEFAKAGLR 227
>gi|189425609|ref|YP_001952786.1| DEAD/DEAH box helicase [Geobacter lovleyi SZ]
gi|189421868|gb|ACD96266.1| DEAD/DEAH box helicase domain protein [Geobacter lovleyi SZ]
Length = 430
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A A TG+GKTAAF+IP + L GP +G R +++ PTRELA Q + R
Sbjct: 38 GRDLIASAQTGTGKTAAFIIPALERLAKPGPAGIGPRVLVLTPTRELAAQVADSVARYGR 97
Query: 107 GLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
L +R ++G + + R Q D+++ TP +L+ L+ ++L+ VE L++D
Sbjct: 98 FLRMRYGSIVGGMPYPDQVRLLR--QPVDLIVATPGRLIDHLERG--RIDLSRVELLVLD 153
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
E+D++ + G DQ+ AA + + +F+AT + +A+ R LK +I +
Sbjct: 154 EADRMLDMGFTDAVDQI----AAATPKKRQTLLFTATMDDPMARLAGRLLKDPSRIAI 207
>gi|297693028|ref|XP_002823828.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX54
[Pongo abelii]
Length = 883
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|255728663|ref|XP_002549257.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
gi|240133573|gb|EER33129.1| hypothetical protein CTRG_03554 [Candida tropicalis MYA-3404]
Length = 434
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + APTGSGKT A+ IP+I + K G +I+ PT ELA Q YN +L+E +
Sbjct: 123 GKDVIVSAPTGSGKTLAYGIPMIQRIIDSKGKG---LIIAPTNELANQIYNTLGQLTESI 179
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ V+ +++A+ R+ KFD+LI+ P +L+ + +D ++L+ + L++DE+D
Sbjct: 180 K-KVEVLLLTKKSAKNLSKRT--KFDILISAPKRLIDV--VDKEKVDLSTINQLVLDEAD 234
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
KLFE D+ + S P++ ++SAT
Sbjct: 235 KLFEGDFAYQTDE--ITSHLSSNPSV--ALYSAT 264
>gi|10039341|dbj|BAB13313.1| Vasa-related protein PlVAS1 [Girardia dorotocephala]
Length = 573
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG---------PKNLGF-RAVIVCPTRELAKQTY 98
GR + ACA TGSGKTAAFLIPII L G + F RA+I+ PTREL +Q +
Sbjct: 150 GRDLMACAQTGSGKTAAFLIPIIKGLHGTVLETDSSNTSSTAFPRALIMTPTRELCRQIF 209
Query: 99 NETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
L G +R A++ G I+ + + A D+L+ TP +L++ L++ ++L
Sbjct: 210 TAARLLCRGSNIRCAYMYGGIEMNKSRRNIQ-ATGCDILVATPGRLIHFLEL--VWVSLR 266
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIY--AACSGP---NLKRGMFSATHTEDVAKWCR 212
+++ ++DE+D++ + GF + + IY A SG ++ MFSAT ++
Sbjct: 267 YIKYFVLDEADRMLDE--EGFYEVVNKIYKEAHQSGDADRSIHLSMFSATFPNEIQTLAS 324
Query: 213 RKLKRRVQINVGL 225
R L + + VG+
Sbjct: 325 RLLSNYLFLAVGV 337
>gi|146421825|ref|XP_001486856.1| hypothetical protein PGUG_00233 [Meyerozyma guilliermondii ATCC
6260]
Length = 534
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A TGSGKT AF +P I+++ G R + + PTRELA Q Y+ L++
Sbjct: 166 GDDVVGVAETGSGKTFAFGVPAINNIITDNKKGLRVLCISPTRELALQIYDNLTMLTKNC 225
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL I G + + + ++A V++ TP +LV LL + A++L+ +++L++DE+
Sbjct: 226 GLTCVAIYGGVPKDQQIKAVKTAS---VVVATPGRLVDLL--NDGAVDLSTIDYLVLDEA 280
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + I C+ + MF+AT ++V + + + V++++G R
Sbjct: 281 DRMLE---KGFEEDIKNII-GCTNKQRQTLMFTATWPKEVRELAATFMNKAVKVSIGNR 335
>gi|119504065|ref|ZP_01626146.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
HTCC2080]
gi|119460068|gb|EAW41162.1| DEAD/DEAH box helicase-like protein [marine gamma proteobacterium
HTCC2080]
Length = 437
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 99/186 (53%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A A TG+GKTA F +P++H L + K RA+++ PTRELA Q
Sbjct: 38 GRDVMAAAQTGTGKTAGFTLPLLHGLSKGQPAKANQVRALVLTPTRELAAQVAESVDIYG 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGP---RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L LR+ V+ G + K P R + D+LI TP +L+ L Q + A++ +E
Sbjct: 98 KYLNLRSAVVFGGV-----KINPQMMRLRKGVDILIATPGRLLDLYQQN--AMSFQKLEV 150
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + GF + I A PN ++ MFSAT +ED+ + + V+
Sbjct: 151 LILDEADRMLDM---GFIHDIRRIMKAL--PNKRQNLMFSATFSEDIRDLAKTIVNNPVE 205
Query: 221 INVGLR 226
I+V R
Sbjct: 206 ISVTPR 211
>gi|408480568|ref|ZP_11186787.1| ATP-dependent RNA helicase [Pseudomonas sp. R81]
Length = 448
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++P+++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALEGRDLRVTAQTGSGKTAAFVLPVLNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVSECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|374336908|ref|YP_005093595.1| ATP-dependent RNA helicase SrmB [Oceanimonas sp. GK1]
gi|372986595|gb|AEY02845.1| ATP-dependent RNA helicase SrmB [Oceanimonas sp. GK1]
Length = 432
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 8/130 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLG--FRAVIVCPTRELAKQTYNETVRLS 105
GR I A APTG+GKTAAFL+P+ H L P+ R +++ PTRELAKQ ++ L
Sbjct: 41 GRDIMASAPTGTGKTAAFLLPVCQHLLDFPRRQAGPARVLVLTPTRELAKQIADDAKALL 100
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ GLR I G + AEK P + D+++ TP +L+ + D + + ++E LI+
Sbjct: 101 KDTGLRVETITGGVN--AEKHLPALTKTTDIVVATPGRLLQYI--DEESFDSRDIEMLIL 156
Query: 165 DESDKLFEAG 174
DE+D++ + G
Sbjct: 157 DEADRMLDMG 166
>gi|28301751|gb|AAN59978.1| DEAD box RNA helicase DP97 [Homo sapiens]
gi|119618446|gb|EAW98040.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_b [Homo
sapiens]
Length = 865
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 117 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 176
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 177 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 232
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 233 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 264
>gi|85001021|ref|XP_955229.1| RNA helicase [Theileria annulata strain Ankara]
gi|65303375|emb|CAI75753.1| RNA helicase, putative [Theileria annulata]
Length = 976
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 14/185 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P I H+L P +N G +++ PTREL Q NE+ +
Sbjct: 405 GRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRENDGMIVLVIAPTRELVIQISNESSKF 464
Query: 105 SEGLGLRAHVIGKIQQAAEKFG--PRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEW 161
S +GL+ I E+ R A+ ++I TP +L+ +L + + NL V +
Sbjct: 465 SRAVGLKTLAIYGGAGIGEQLNALKRGAE---IVIGTPGRLIDVLTLSKGKVTNLRRVTF 521
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++F+ GF Q++ I P+ + +FSAT + ++ L + +QI
Sbjct: 522 LVLDEADRMFDM---GFAPQISAIVGNIR-PDRQTALFSATFPIMIENLAKKILAKPLQI 577
Query: 222 NVGLR 226
VG R
Sbjct: 578 VVGQR 582
>gi|422644088|ref|ZP_16707226.1| ATP-dependent RNA helicase SrmB, partial [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957640|gb|EGH57900.1| ATP-dependent RNA helicase SrmB [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 165
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 85/148 (57%), Gaps = 18/148 (12%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP + PL GR + A TGSGKTAAF++PI++ L GP + RAVI+
Sbjct: 26 LKFVEPTPVQSAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVDIRAVIL 85
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ ++A +I K+Q A + P D+LI TP +
Sbjct: 86 LPTRELAQQTLKEVERFSQFTFVKAGLITGGEDFKVQAAMLRKVP------DILIGTPGR 139
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKL 170
L L Q++ L+L +VE L++DE+D++
Sbjct: 140 L--LEQLNAGNLDLKHVEVLVLDEADRM 165
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G V+ PTRELA Q Y E +
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKF 315
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +++I TP +L+ LL+M AL + +L+
Sbjct: 316 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEIVIATPGRLIDLLKMK--ALKMFRATYLV 371
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 372 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVTV 427
Query: 224 G 224
G
Sbjct: 428 G 428
>gi|365760745|gb|EHN02442.1| Dbp3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401840222|gb|EJT43125.1| DBP3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 516
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 100/178 (56%), Gaps = 10/178 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + G + +++ PTRELA Q Y+ + L++
Sbjct: 142 GKDVVGVAETGSGKTFAFGVPAISHLMNDQGKRGIQVLVISPTRELASQIYDNLIILTDK 201
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 202 VGMQCCCVYGGVPKDEQRNQLKRSQ---VVVATPGRLLDLLQ--EGSVDLSQVNYLVLDE 256
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + +K +++++G
Sbjct: 257 ADRMLE---KGFEEDIRNIIRETDASKRQTLMFTATWPKEVRELASTFMKNPIKVSIG 311
>gi|402887738|ref|XP_003907240.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Papio anubis]
Length = 883
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|223590190|sp|A5DAC8.2|DBP3_PICGU RecName: Full=ATP-dependent RNA helicase DBP3
gi|190344457|gb|EDK36135.2| hypothetical protein PGUG_00233 [Meyerozyma guilliermondii ATCC
6260]
Length = 534
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A TGSGKT AF +P I+++ G R + + PTRELA Q Y+ L++
Sbjct: 166 GDDVVGVAETGSGKTFAFGVPAINNIITDNKKGLRVLCISPTRELALQIYDNLTMLTKNC 225
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL I G + + + ++A V++ TP +LV LL + A++L+ +++L++DE+
Sbjct: 226 GLTCVAIYGGVPKDQQIKAVKTAS---VVVATPGRLVDLL--NDGAVDLSTIDYLVLDEA 280
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + I C+ + MF+AT ++V + + + V++++G R
Sbjct: 281 DRMLE---KGFEEDIKNII-GCTNKQRQTLMFTATWPKEVRELAATFMNKAVKVSIGNR 335
>gi|71651136|ref|XP_814251.1| ATP-dependent RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70879209|gb|EAN92400.1| ATP-dependent RNA helicase, putative [Trypanosoma cruzi]
Length = 861
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 96/159 (60%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFL+P+++ L+ K +G R +++ PTREL+ Q ++L++
Sbjct: 102 GSDVVAMARTGSGKTAAFLVPMLNLLKSHSKTVGIRGLVLAPTRELSLQILRFGIQLNKF 161
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G ++Q E G D+++ TP +L+++ M+ +L L+ V+ L++
Sbjct: 162 LDLRFAALVGGNSLEQQFELLGSNP----DIVVATPGRLLHI--MEEASLKLSMVKCLVL 215
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRGMFSAT 202
DE+D+LFE G+ Q ++ P+ +R +FSAT
Sbjct: 216 DEADRLFELGL-----QPQIVAVMQKVPDACQRALFSAT 249
>gi|89269500|emb|CAJ82782.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus (Silurana)
tropicalis]
Length = 437
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 110 GKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKF 169
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L VE+++ DE
Sbjct: 170 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLMHVAIEMN---LKLRTVEYVVFDE 225
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGL 225
+D+LFE GF +QL I + P ++ +FSAT + + ++ R L V I + +
Sbjct: 226 ADRLFEM---GFAEQLQEIISRL--PETRQTLLFSATLPKMLLEFARAGLTEPVLIRLDV 280
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKF 315
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +V+I TP +L+ LL+M AL + +L+
Sbjct: 316 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEVVIATPGRLIDLLKMK--ALKMFRATYLV 371
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P + +FSAT V + R L +++ V
Sbjct: 372 LDEADRMFDL---GFEPQIRSIVGQIR-PGRQTLLFSATMPYKVERLAREILTDPIRVTV 427
Query: 224 G 224
G
Sbjct: 428 G 428
>gi|13470594|ref|NP_102163.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
gi|14021336|dbj|BAB47949.1| ATP-dependent RNA helicase [Mesorhizobium loti MAFF303099]
Length = 467
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR IF A TGSGKTAAF +PI+ + G K RA+I+ PTRELA Q + L
Sbjct: 47 GRDIFGIAQTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKIL 106
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G + A V+G + + ++ + A D+LI TP +L L++ L L++ +WL+
Sbjct: 107 AKGAHVSTALVLGGVSRFSQV--KKVAPGVDILIATPGRLTDLVREGD--LILSDTKWLV 162
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE D++ + GF + + I A + P+ + +FSAT +++A+ + LK V+I V
Sbjct: 163 LDEGDRMLDM---GFINDVKRI-AKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEV 218
>gi|383421509|gb|AFH33968.1| ATP-dependent RNA helicase DDX54 isoform 1 [Macaca mulatta]
Length = 884
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|336258308|ref|XP_003343970.1| hypothetical protein SMAC_09016 [Sordaria macrospora k-hell]
Length = 580
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---------RAVIVCPTRELAKQTYN 99
GR + A TGSGKT AF +P + SL F RAVIV PTRELA QT+
Sbjct: 182 GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 241
Query: 100 ETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +GL A I G + ++ D++ TP +L L +++LAN
Sbjct: 242 ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEG--SISLAN 299
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLK 216
V + ++DE+D++ + RGF + + +I + C P KR MF+AT D+ K +
Sbjct: 300 VSFAVLDEADRMLD---RGFSEDIKMILSECP-PREKRQTLMFTATWPLDIQKLAESYMI 355
Query: 217 RRVQINVGLR 226
Q+ +G R
Sbjct: 356 NPAQVTIGHR 365
>gi|344302066|gb|EGW32371.1| ATP-dependent RNA helicase DBP3 [Spathaspora passalidarum NRRL
Y-27907]
Length = 554
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF +P I+++ G R + + PTRELA Q Y+ V L+
Sbjct: 181 GKDVIGVAETGSGKTFAFGVPAINNIITLNKTGLRVLCISPTRELALQIYDNLVDLTANT 240
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
+ I G + + + R+A +V++ TP +L+ L+ + A++L+++++L++DE+
Sbjct: 241 SINCVAIYGGVSKDDQIKKLRNA---NVVVATPGRLLDLI--NDGAVDLSDIDYLVLDEA 295
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + I + + MF+AT ++V + +K ++++G R
Sbjct: 296 DRMLE---KGFEEDIKAIIGNTKAESRQTLMFTATWPKEVRELANTFMKTPAKVSIGDR 351
>gi|307193157|gb|EFN76062.1| ATP-dependent RNA helicase DDX54 [Harpegnathos saltator]
Length = 772
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT L +
Sbjct: 72 GRDIVAMARTGSGKTACFLIPLFEKLKTRLAKTGARALILSPTRELALQTLKFIKELGKF 131
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+A VI ++F D+++ TP + +++ ++MD L L NVE+++ DE
Sbjct: 132 TGLKAAVILGGDSIDDQFSAIHGNP-DIIVATPGRFLHICVEMD---LQLKNVEYVVFDE 187
Query: 167 SDKLFEAG 174
+D+LFE G
Sbjct: 188 ADRLFEMG 195
>gi|337269037|ref|YP_004613092.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
opportunistum WSM2075]
gi|336029347|gb|AEH88998.1| DEAD/DEAH box helicase domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 477
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR IF A TGSGKTAAF +PI+ + G K RA+I+ PTRELA Q + L
Sbjct: 57 GRDIFGIAQTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKIL 116
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G + A V+G + + ++ + A D+LI TP +L L++ L L++ +WL+
Sbjct: 117 AKGAHVSTALVLGGVSRFSQV--KKVAPGVDILIATPGRLTDLVREGD--LILSDTKWLV 172
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE D++ + GF + + I A + P+ + +FSAT +++A+ + LK V+I V
Sbjct: 173 LDEGDRMLDM---GFINDVKRI-AKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEV 228
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G V+ PTRELA Q Y E +
Sbjct: 182 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKF 241
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +++I TP +L+ LL+M AL + +L+
Sbjct: 242 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEIVIATPGRLIDLLKMK--ALKMFRATYLV 297
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 298 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVTV 353
Query: 224 G 224
G
Sbjct: 354 G 354
>gi|109098826|ref|XP_001111246.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Macaca
mulatta]
Length = 883
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|344232323|gb|EGV64202.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 910
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 87/156 (55%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAF +P++ L+ G RA+I+ P+RELA QTY + S
Sbjct: 125 SRDVVGMARTGSGKTAAFTLPMVEKLKAHSAKSGSRAIILSPSRELALQTYKQVKEFSHR 184
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ ++F D++I TP + ++L ++MD LNL ++E+++ DE
Sbjct: 185 TDLRIMLLVGGDSLDDQFSAMMTNP-DIIIATPGRFMHLKIEMD---LNLKSIEYIVFDE 240
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL + A + + +FSAT
Sbjct: 241 ADRLFEL---GFAEQLNELIAGLPA-SRQTLLFSAT 272
>gi|320580417|gb|EFW94640.1| Putative ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 499
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKT AF +P + L + + +I+ PTRELA Q Y+ L+ +
Sbjct: 127 GRDMVGVAETGSGKTMAFGVPAVEHLLKSDSKALQVLIISPTRELASQIYDNLNELTAKV 186
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL V G + + ++ R+ ++ +I TP +L+ L++ +++L + +L++DE+
Sbjct: 187 GLECVCVYGGVSKDDQR---RAVKRSQCVIATPGRLIDLIE--DGSISLDKINYLVLDEA 241
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + + +G N + MF+AT ++V + + + V++ +G R
Sbjct: 242 DRMLE---KGFEEDIKKVMKLTNG-NRQTLMFTATWPKEVRELAMNFMDKPVKVTIGQR 296
>gi|452838537|gb|EME40477.1| hypothetical protein DOTSEDRAFT_90700 [Dothistroma septosporum
NZE10]
Length = 1010
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G RA+++ P+RELA QT + +G
Sbjct: 218 GQDVVGMARTGSGKTAAFVIPMIEKLKSHSAKVGARAIVLSPSRELALQTLKVVKEMGKG 277
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ ++F ++ D++I TP + +L ++M L L++V++++ DE
Sbjct: 278 TDLRTTLLVGGDSLEDQFSSMASNP-DIIIATPGRFEHLKVEM---GLELSSVKYVVFDE 333
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL I + PN + +FSAT + + ++ R L+
Sbjct: 334 ADRLFEM---GFAAQLHEIMYSLP-PNRQTLLFSATLPKSLVEFARAGLQ 379
>gi|397525044|ref|XP_003832488.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Pan paniscus]
Length = 884
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|340368286|ref|XP_003382683.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Amphimedon
queenslandica]
Length = 640
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 77/132 (58%), Gaps = 13/132 (9%)
Query: 55 CAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHV 114
CAPTG GKT ++++PI+ SL +A++V P+++LA Q YN V +S+G +R
Sbjct: 219 CAPTGCGKTLSYVVPIVSSLLNRITRELKALVVVPSKDLALQVYNVFVSVSKGTRVRIGA 278
Query: 115 IG--------KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G + +Q GP DVL+ TP +LV LQ + P L+LA++ +L++DE
Sbjct: 279 VGSQNTSFSVEQKQLISHHGP----AVDVLVATPGRLVRHLQ-ETPFLSLASLRYLVIDE 333
Query: 167 SDKLFEAGVRGF 178
+D++FE +
Sbjct: 334 ADRIFEQSYHNW 345
>gi|38014855|gb|AAH05848.2| DDX54 protein, partial [Homo sapiens]
Length = 864
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 116 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 175
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 176 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 231
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 232 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 263
>gi|451946005|ref|YP_007466600.1| DNA/RNA helicase, superfamily II [Desulfocapsa sulfexigens DSM
10523]
gi|451905353|gb|AGF76947.1| DNA/RNA helicase, superfamily II [Desulfocapsa sulfexigens DSM
10523]
Length = 409
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 82/128 (64%), Gaps = 7/128 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TG+GKTAAF++P++ L GPK RA+I+ PTRELA+QT++ ++++E
Sbjct: 38 GRDLLGLAQTGTGKTAAFVLPLLQRLHTGPKG-KVRALIIAPTRELAEQTHSYIIKMAEH 96
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR+ V+ G + + ++ R ++++ P +L+ L+ + +NL+ VE LI+DE
Sbjct: 97 THLRSMVVYGGVSKQSQINAIRKGA--EIIVACPGRLLDLV--NTKIINLSTVEMLILDE 152
Query: 167 SDKLFEAG 174
+D +F+ G
Sbjct: 153 ADHMFDHG 160
>gi|33594279|ref|NP_881923.1| ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|384205577|ref|YP_005591316.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|408417408|ref|YP_006628115.1| ATP-dependent RNA helicase [Bordetella pertussis 18323]
gi|33564354|emb|CAE43658.1| putative ATP-dependent RNA helicase [Bordetella pertussis Tohama I]
gi|332383691|gb|AEE68538.1| putative ATP-dependent RNA helicase [Bordetella pertussis CS]
gi|401779578|emb|CCJ65116.1| putative ATP-dependent RNA helicase [Bordetella pertussis 18323]
Length = 477
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSLHTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 170 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNHPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|110835269|ref|YP_694128.1| DEAD/DEAH box helicase [Alcanivorax borkumensis SK2]
gi|110648380|emb|CAL17856.1| ATP-dependent RNA helicase, DEAD box family [Alcanivorax
borkumensis SK2]
Length = 450
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 17/160 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A TGSGKTAAFL+P++H L P+ RA+I+ PTRELA+QT +
Sbjct: 39 GRDLRVVARTGSGKTAAFLLPMLHQLLQYSRPRT-DTRALILLPTRELAQQTLKQV---- 93
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSA---QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
E LG + ++ E F ++A + ++LI TP +L+ +D L L ++E L
Sbjct: 94 EALGRYTFIKAELLTGGEDFKVQAAKMRKNPEILIGTPGRLIE--HLDAGNLLLQDLEML 151
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
++DESD++ + GF D + + A C P + +FSAT
Sbjct: 152 VLDESDRMLDM---GFNDDVLRLAAECR-PERQTLLFSAT 187
>gi|426392064|ref|XP_004062380.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Gorilla
gorilla gorilla]
Length = 575
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 33 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 92
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 93 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 145
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 146 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 201
Query: 221 INVG 224
I V
Sbjct: 202 IFVN 205
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + + L G +VI+ PTRELA Q E +
Sbjct: 404 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKF 463
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL
Sbjct: 464 SKALGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLGANSGRVTNLRRA 518
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 519 TYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKPI 574
Query: 220 QINVGLR 226
++ VG R
Sbjct: 575 EVQVGGR 581
>gi|33598065|ref|NP_885708.1| ATP-dependent RNA helicase [Bordetella parapertussis 12822]
gi|33566623|emb|CAE38832.1| putative ATP-dependent RNA helicase [Bordetella parapertussis]
Length = 477
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 54 GRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILTPTRELADQVYESV 113
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S LR+ V+ G + +K R + +VL+ TP +L L ++ +NL+ V
Sbjct: 114 KRYSLHTPLRSAVVFGGVDIGPQKEALR--RGCEVLVATPGRL--LDHVEQKNVNLSQVG 169
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L V
Sbjct: 170 ILVLDEADRMLDM---GFLPDLERIIRLL--PAQRQGLLFSATFSNEIRKLGRSYLNHPV 224
Query: 220 QINVGLR 226
+I V R
Sbjct: 225 EIEVAAR 231
>gi|325284979|ref|YP_004260769.1| DEAD/DEAH box helicase [Cellulophaga lytica DSM 7489]
gi|324320433|gb|ADY27898.1| DEAD/DEAH box helicase domain protein [Cellulophaga lytica DSM
7489]
Length = 429
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +P++H L K L RA+I+ PTRELA Q + S
Sbjct: 38 GKDVLASAQTGTGKTAGFTLPLLHLLSEQKALRHRPVRALILTPTRELAAQIFANVKEYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
E L LR+ VI G + Q + + DVL+ TP +L+ L + L+L VE ++
Sbjct: 98 EFLDLRSAVIFGGVNQKPQIANLKRG--MDVLVATPGRLLDL--HNQRFLSLDKVEIFVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
DE+D++ + G +R + +I A NL MFSAT ++D+ K L +Q+
Sbjct: 154 DEADRMLDMGFLRDIERVMKLIPAKRQ--NL---MFSATFSKDIKKLAHGILNNPIQV 206
>gi|410216684|gb|JAA05561.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253652|gb|JAA14793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293490|gb|JAA25345.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354051|gb|JAA43629.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 885
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|410216682|gb|JAA05560.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410253650|gb|JAA14792.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410293488|gb|JAA25344.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
gi|410354049|gb|JAA43628.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Pan troglodytes]
Length = 882
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|114647100|ref|XP_001152281.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 5 [Pan
troglodytes]
Length = 884
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G V+ PTRELA Q Y E +
Sbjct: 268 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKF 327
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ LR A V G + + ++F A +++I TP +L+ LL+M AL + +L+
Sbjct: 328 AKPYNLRVAAVYGGVSK-FDQFKELKA-GCEIVIATPGRLIDLLKMK--ALKMFRATYLV 383
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 384 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVTV 439
Query: 224 G 224
G
Sbjct: 440 G 440
>gi|164419743|ref|NP_001104792.1| ATP-dependent RNA helicase DDX54 isoform 1 [Homo sapiens]
gi|19110894|gb|AAL85336.1|AF478457_1 ATP-dependent RNA helicase [Homo sapiens]
gi|119618445|gb|EAW98039.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, isoform CRA_a [Homo
sapiens]
Length = 882
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|51094101|ref|NP_076977.3| ATP-dependent RNA helicase DDX54 isoform 2 [Homo sapiens]
gi|46576615|sp|Q8TDD1.2|DDX54_HUMAN RecName: Full=ATP-dependent RNA helicase DDX54; AltName:
Full=ATP-dependent RNA helicase DP97; AltName: Full=DEAD
box RNA helicase 97 kDa; AltName: Full=DEAD box protein
54
gi|162319036|gb|AAI56670.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [synthetic construct]
Length = 881
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|345570653|gb|EGX53474.1| hypothetical protein AOL_s00006g340 [Arthrobotrys oligospora ATCC
24927]
Length = 946
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF++P+I L+ +G RA+++ P+RELA QT +S G
Sbjct: 139 GQDVVGMARTGSGKTAAFVVPMIEKLKAHSAKVGARALVMSPSRELALQTLKVVKDISRG 198
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+A ++ ++F + D++I TP + ++L ++M+ L+L+++++++ DE
Sbjct: 199 TDLKAILLVGGDSLEDQFSMMTTNP-DIIIATPGRFLHLKVEME---LDLSSMQYVVFDE 254
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
+D+LFE GF QL I A + +FSAT + + ++ + L
Sbjct: 255 ADRLFEM---GFAAQLGEILHALPASR-QTTLFSATLPKSLVEFAKAGL 299
>gi|283769405|ref|ZP_06342304.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
gi|283104062|gb|EFC05446.1| putative ATP-dependent RNA helicase RhlE [Bulleidia extructa W1219]
Length = 425
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 19/181 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + ACA TG+GKTA F +PI++SL KN RA+I+ PTRELA Q + +
Sbjct: 38 GSDLIACAQTGTGKTATFALPILNSLSKEKNHSIRALILTPTRELATQIFENIKMFGRYM 97
Query: 109 GLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LRA V G A + RS D+LI TP +L+ L ++L ++E+L++DE+
Sbjct: 98 HLRACCVYGGSPAAPQLKAIRSG--CDILIATPGRLLDYLAHG--KISLRHIEFLVLDEA 153
Query: 168 DKLFEAG----VRGFRDQLAVIYAACSGPNLK-RGMFSATHTEDVAKWCRRKLKRRVQIN 222
D++ + G VR Q+ PN + +FSAT +++ + R LK ++
Sbjct: 154 DRMLDMGFIADVRKIVQQI---------PNDRITALFSATMPKEIQELARDILKNPKEVR 204
Query: 223 V 223
+
Sbjct: 205 I 205
>gi|47219195|emb|CAG11213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 574
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 23 TTLAVVSNSIFKHFEP--HFTITYLSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR 75
TL V F+H H TI PL GR + A A TGSGKT AFLIP +I+ L+
Sbjct: 71 NTLKGVKELGFEHMTEIQHKTI---RPLLEGRDVLAAAKTGSGKTLAFLIPCIELIYKLK 127
Query: 76 -GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF- 133
P+N G +I+ PTRELA QTY + E + H G I + + AQK
Sbjct: 128 FMPRN-GTGVIILSPTRELAMQTYG---VMKELMTHHVHTYGLIMGGSNRSA--EAQKLA 181
Query: 134 ---DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACS 190
++L+ TP +L+ LQ + P N++ LI+DE+D++ E GF ++L I
Sbjct: 182 NGINILVATPGRLLDHLQ-NTPGFMFKNLQCLIIDEADRILEV---GFEEELKQIIKLL- 236
Query: 191 GPNLKRGM-FSATHTEDVAKWCRRKLKR 217
P ++ M FSAT T V R LK+
Sbjct: 237 -PKRRQTMLFSATQTRRVEDLARISLKK 263
>gi|307175593|gb|EFN65503.1| ATP-dependent RNA helicase DDX54 [Camponotus floridanus]
Length = 751
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A A TGSGKTA FLIP+ L+ + G RA+I+ PTRELA QT L
Sbjct: 45 GRDIVAMARTGSGKTACFLIPLFEKLKTRQTKTGARALILSPTRELALQTLKFIKELGRF 104
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+A VI +F + D+++ TP + V++ ++MD L L NVE+++ DE
Sbjct: 105 TGLKAVVILGGDSMDNQFSI-IHENPDIIVATPGRFVHICIEMD---LKLKNVEYVVFDE 160
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +Q+ I
Sbjct: 161 ADRLFEM---GFGEQIQEI 176
>gi|143456390|sp|Q0DBS1.2|RH51_ORYSJ RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 51
gi|53792028|dbj|BAD54613.1| putative myc-regulated DEAD/H box 18 RNA helicase [Oryza sativa
Japonica Group]
Length = 590
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 23/191 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH---SLR-GPKNLGFRAVIVCPTRELAKQTYN---E 100
LG + A A TGSGKT AFLIP I LR P+N G +++CPTRELA QT+N E
Sbjct: 122 LGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRN-GTGVIVLCPTRELAIQTHNVAKE 180
Query: 101 TVRL-SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+R S+ LG +VIG I E + A+ +VL+ TP +L+ +Q + +
Sbjct: 181 LMRYHSQTLG---YVIGGIDLRGE--AEQLAKGINVLVATPGRLLDHMQ-KTKSFKYECL 234
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR-----RK 214
+ LI+DE+D++ E + F +Q+ I+ + +FSAT TE V + + ++
Sbjct: 235 KCLIIDEADRILE---QNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKE 291
Query: 215 LKRRVQINVGL 225
++R + VG+
Sbjct: 292 ERQRTLVYVGV 302
>gi|340717314|ref|XP_003397129.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Bombus
terrestris]
Length = 740
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 100/184 (54%), Gaps = 23/184 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-----LRGPKNLGFRAVIVCPTRELAKQTYNETV 102
LGR I CA TG+GKTAA+++P + L GP R +++ PTREL Q Y T
Sbjct: 193 LGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPS--ISRVLVLVPTRELGVQVYQVTK 250
Query: 103 RLSE----GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
+LS+ +GL + K+Q+A + P D++I TP +L+ L+ + P+ +L
Sbjct: 251 QLSQFTTIEVGLSVGGLDVKVQEAVLRKNP------DIVIATPGRLIDHLR-NTPSFSLD 303
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
++E LI+DE+D++ + F +Q+ I CS + +FSAT TE+V L +
Sbjct: 304 SIEVLILDEADRMLDE---YFAEQMKYIVKQCSRSR-QTILFSATMTEEVKDLAAVSLDK 359
Query: 218 RVQI 221
V++
Sbjct: 360 PVKV 363
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 326 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEDNEAEGPYAVVMAPTRELAQQ 385
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+ETV+ + LG++ ++G Q+ E+ G R Q +V+I TP +L+ L+ LN
Sbjct: 386 IEDETVKFAHYLGIKVVSIVGG--QSIEEQGFRIRQGCEVVIATPGRLLDCLERRYAVLN 443
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+ + A NLK MF
Sbjct: 444 QCN--YVVLDEADRMIDM---GFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMF 498
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V +N+G
Sbjct: 499 SATMPPAVERLARKYLRNPVVVNIG 523
>gi|355683380|gb|AER97088.1| DEAD box polypeptide 54 [Mustela putorius furo]
Length = 877
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GLR +I + ++F + D++I TP +LV++ ++M+ L L ++E+++ DE
Sbjct: 192 TGLRTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSIEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|433775456|ref|YP_007305923.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
gi|433667471|gb|AGB46547.1| DNA/RNA helicase, superfamily II [Mesorhizobium australicum
WSM2073]
Length = 473
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR IF A TGSGKTAAF +PI+ + G K RA+I+ PTRELA Q + L
Sbjct: 53 GRDIFGIAQTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKIL 112
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G + A V+G + + ++ + A D+LI TP +L L++ L L++ +WL+
Sbjct: 113 AKGAHVSTALVLGGVSRFSQV--KKVAPGVDILIATPGRLTDLVREG--DLILSDTKWLV 168
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE D++ + GF + + I A + P+ + +FSAT +++A+ + LK V+I V
Sbjct: 169 LDEGDRMLDM---GFINDVKRI-AKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEV 224
>gi|344923278|ref|ZP_08776739.1| superfamily II DNA/RNA helicase [Candidatus Odyssella
thessalonicensis L13]
Length = 413
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 21/172 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF--RAVIVCPTRELAKQTYNETVRLSE 106
G+ I ACA TG+GKTAAFL+P I ++ ++ AVI+ PTRELA Q Y+ + +
Sbjct: 38 GKDILACAQTGTGKTAAFLLPTIEIIKHSRSRHRLPSAVILAPTRELATQVYDNFLSYTA 97
Query: 107 GLGLRA-HVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
G L+A V+G IQ+ K G D+LI TP +L+ L + L L NV+
Sbjct: 98 GTNLKAISVVGGEIISIQERILKKG------VDILIATPGRLIDLFERG--KLILTNVKV 149
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCR 212
+++DE+D++ + GF ++ I++ P L++ MFSAT + ++ + +
Sbjct: 150 VVIDEADRMLDM---GFMPEVDKIFSFL--PRLRQTLMFSATISPEIKRISQ 196
>gi|59713736|ref|YP_206511.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
gi|59481984|gb|AAW87623.1| ATP-dependent RNA helicase [Vibrio fischeri ES114]
Length = 460
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNETVRLS 105
G+ + A + TGSGKT AF++P++H K+ RAVI+ PTRELAKQ Y+ +
Sbjct: 53 GKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTRELAKQVYSHLRAML 112
Query: 106 EGLGLRAHVIGKIQQAAEKFGP-RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL A +I + ++ R KF ++ TP +L L+ +L L +E LI+
Sbjct: 113 GGLTYDATLITGGENFNDQVNALRKHPKF--IVATPGRLADHLEH--QSLYLDGLETLIL 168
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTED-VAKWCRRKLKRRVQINV 223
DE+D++ + GF + L I+ A S + MFSAT D V K+ L +I+V
Sbjct: 169 DEADRMLDL---GFAEHLQKIHKAASHRRRQTLMFSATLDHDAVNKFAGNMLDNPKRISV 225
Query: 224 GL 225
GL
Sbjct: 226 GL 227
>gi|224613200|gb|ACN60179.1| ATP-dependent RNA helicase DDX18 [Salmo salar]
Length = 470
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A A TGSGKT AFLIP +I+ L+ P+N G VI+ PTRELA QTY +
Sbjct: 15 GRDILAAAKTGSGKTLAFLIPSIELIYKLKFMPRN-GTGVVILSPTRELAMQTYG---VM 70
Query: 105 SEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
E + H G I + + R A ++L+ TP +L+ LQ + N++ L
Sbjct: 71 KELMTHHVHTFGLIMGGSNRTAEAQRLANGVNILVATPGRLLDHLQ-NTAGFMYKNLQCL 129
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRR 218
I+DE+D++ E GF ++L I P ++ M FSAT T V R LK+
Sbjct: 130 IIDEADRILEV---GFEEELKQIIKLL--PKRRQTMLFSATQTRKVEDLARISLKKE 181
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 102/186 (54%), Gaps = 21/186 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKTA F+ P I H + P K G A+ + PTRELA Q Y ET++
Sbjct: 342 GRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLETLKY 401
Query: 105 SEGLGLRAHV----IGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
S+ L+ V + K QQ E K G ++++ TP +L+ ++++ LN V
Sbjct: 402 SKYFKLKTTVLYGGVSKQQQCKELKAG------CEIIVATPGRLIDMIKLKATKLN--RV 453
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+DK+F+ GF Q+ I P+ + +FSAT +V ++ R L +
Sbjct: 454 SYLVLDEADKMFDF---GFGPQVLSIVNHVR-PDRQTLLFSATFKPNVEEFARTILSDPI 509
Query: 220 QINVGL 225
+I++G+
Sbjct: 510 KISIGM 515
>gi|395648526|ref|ZP_10436376.1| ATP-dependent RNA helicase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 448
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVGECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|392546250|ref|ZP_10293387.1| ATP-dependent RNA helicase SrmB [Pseudoalteromonas rubra ATCC
29570]
Length = 410
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 17/176 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGF-RAVIVCPTRELAKQTYNETVRL 104
+GR I A APTG+GKTAAFLIP I L ++ GF R +I+ PTRELA Q + + L
Sbjct: 37 MGRDILASAPTGTGKTAAFLIPAIQYLMDFPRRDPGFARVLIMTPTRELAYQVFEQCEAL 96
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ G L+ V+ G I + K + D+LI TP +L+ L+ + + NVE LI
Sbjct: 97 AAGTHLKIGVVTGGINYGSHK--EIFEKNNDILIATPGRLMEYLETEN--FHADNVELLI 152
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTED-VAKWCRRKLK 216
+DE+D++ + GF+ ++ I C+ +R +FSAT D V + R LK
Sbjct: 153 LDEADRMLDL---GFKKEMLKI---CNEAKNRRQCFLFSATLEGDSVELFAERILK 202
>gi|367022384|ref|XP_003660477.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
gi|347007744|gb|AEO55232.1| hypothetical protein MYCTH_2298870 [Myceliophthora thermophila ATCC
42464]
Length = 926
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 96/169 (56%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT L G
Sbjct: 129 RDVVGMARTGSGKTAAFVIPMIEHLKAHSARVGARALILSPSRELALQTLKVVKELGRGT 188
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG A D++I TP + ++L ++M +L+L+++ +++ DE+
Sbjct: 189 DLKTVLLVGGDSLEEQFG-LMATNPDIIIATPGRFLHLKVEM---SLDLSSIRYVVFDEA 244
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 245 DRLFEM---GFATQLTEILHALP-PSRQTLLFSATLPSSLVEFARAGLQ 289
>gi|328849200|gb|EGF98385.1| hypothetical protein MELLADRAFT_22529 [Melampsora larici-populina
98AG31]
Length = 815
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ ++ + L G A+I+ PTRELA Q Y E
Sbjct: 185 GRDVIGVAKTGSGKTLAFLLPMFRHIKDQRPLEALEGPIAMIMTPTRELATQIYKEGRPF 244
Query: 105 SEGLGLRA----------HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-A 153
+ LGLRA I +++ AE V++ TP +++ LL +
Sbjct: 245 LKALGLRAACAYGGSPLKDNIADMKRGAE-----------VIVCTPGRMIELLTTNSGRV 293
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
+N+ V +L++DE+D++F+ GF Q+ I P+ + +FSAT + + R+
Sbjct: 294 INMRRVTYLVLDEADRMFDM---GFEPQVMKIVNQIR-PDRQTVLFSATFPKQMEALARK 349
Query: 214 KLKRRVQINVGLR 226
L+R ++I VG R
Sbjct: 350 ILRRPLEITVGGR 362
>gi|426374226|ref|XP_004053980.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Gorilla gorilla
gorilla]
Length = 881
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|226483435|emb|CAX74018.1| putative ATP-dependent RNA helicase DDX52 [Schistosoma japonicum]
Length = 606
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 66/233 (28%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--------------RGPKNLGFR-----AVIVCP 89
R + ACAPTGSGKTAA+L+P+++ L K L A+I+ P
Sbjct: 97 SRNLLACAPTGSGKTAAYLLPVLNQLLSTNVSENSKCVDTSNGKTLSEHKISPFALILAP 156
Query: 90 TRELAKQTYNETVRLSEGL-------------GLRAHVIGKIQQAA---EKFGPRSAQKF 133
T+EL Q +E +RL G+ +R ++ A+ +KF K
Sbjct: 157 TQELMHQIRSEAIRLLRGIQDCYVAALHKKHYSVRCRKRAEVNDASVLTKKFKNVRELKL 216
Query: 134 ----DVLITTPNKLVYLLQ--MDPPALNLANVEWLIVDESDKLFEAGV------------ 175
++++TPN+L LL +D +NL+ + W++VDE DK+ E
Sbjct: 217 PISTKIIVSTPNRLSNLLSLPLDKCPINLSRLSWIVVDECDKMLEINFNDIPSNSEPGNK 276
Query: 176 -----RGFRDQLAVIYAACSGPNLKR--------GMFSATHTEDVAKWCRRKL 215
RGF +QLA I+ A N +FSAT ++V W R +L
Sbjct: 277 TNYRPRGFHNQLAPIFKAVQNINHVEQSNIRPAVALFSATVPDEVVSWARNQL 329
>gi|197336796|ref|YP_002158115.1| ATP-dependent RNA helicase [Vibrio fischeri MJ11]
gi|197314048|gb|ACH63497.1| ATP-dependent RNA helicase [Vibrio fischeri MJ11]
Length = 460
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNETVRLS 105
G+ + A + TGSGKT AF++P++H K+ RAVI+ PTRELAKQ Y+ +
Sbjct: 53 GKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTRELAKQVYSHLRAML 112
Query: 106 EGLGLRAHVIGKIQQAAEKFGP-RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL A +I + ++ R KF ++ TP +L L+ +L L +E LI+
Sbjct: 113 GGLTYDATLITGGENFNDQVNALRKHPKF--IVATPGRLADHLEH--QSLYLDGLETLIL 168
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTED-VAKWCRRKLKRRVQINV 223
DE+D++ + GF + L I+ A S + MFSAT D V K+ L +I+V
Sbjct: 169 DEADRMLDL---GFAEHLQKIHKAASHRRRQTLMFSATLDHDAVNKFAGNMLDNPKRISV 225
Query: 224 GL 225
GL
Sbjct: 226 GL 227
>gi|433460136|ref|ZP_20417771.1| ATP-dependent RNA helicase [Halobacillus sp. BAB-2008]
gi|432191918|gb|ELK48837.1| ATP-dependent RNA helicase [Halobacillus sp. BAB-2008]
Length = 393
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 23/182 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR I A A TG+GKT AFL+PI+H++ P ++V++ PTRELA Q E ++ +
Sbjct: 39 GRDIIAEAQTGTGKTFAFLLPILHNI-DPDLAEVQSVVITPTRELALQITEEVTKVKDA- 96
Query: 109 GLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
HV+ + + A K R+ ++I TP +L L M ++L +V L+
Sbjct: 97 --STHVLAVYGGQDVAKQANKLNGRA----HIVIATPGRL--LDHMRRGTISLQSVRHLV 148
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ EAG L + A S N +R +FSAT T+ V K R+ LK +I
Sbjct: 149 LDEADQMLEAGF------LPDVEAILSEMNAERQSMLFSATITKQVQKLGRKMLKDPARI 202
Query: 222 NV 223
+V
Sbjct: 203 SV 204
>gi|387894976|ref|YP_006325273.1| DEAD/DEAH box helicase [Pseudomonas fluorescens A506]
gi|387163383|gb|AFJ58582.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
A506]
Length = 448
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++P+++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVGECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|440637343|gb|ELR07262.1| ATP-dependent RNA helicase dbp10 [Geomyces destructans 20631-21]
Length = 928
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 57/170 (33%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT + G
Sbjct: 128 QDVVGMARTGSGKTAAFVIPMIEKLKAHSAKVGARALILSPSRELALQTLQVVKQFGRGT 187
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG ++ D++I TP + ++L ++M L+L+++++++ DE+
Sbjct: 188 DLKCVLLVGGDSLEEQFGFMASNP-DIVIATPGRFLHLKVEM---GLDLSSMKYVVFDEA 243
Query: 168 DKLFEAGVRGFRDQLA-VIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL ++YA S + + +FSAT + + ++ R L+
Sbjct: 244 DRLFEM---GFAAQLTEILYALPS--SRQTLLFSATLPKSLVEFARAGLE 288
>gi|403281618|ref|XP_003932278.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Saimiri boliviensis
boliviensis]
Length = 879
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I A G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIARLPGGH-QTVLFSAT 280
>gi|423692871|ref|ZP_17667391.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
gi|387997844|gb|EIK59173.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
SS101]
Length = 448
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIV 87
K EP PL GR + A TGSGKTAAF++P+++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPVLNRLIGPAKVRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGIITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF D + + C N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFADDVQRLVGECV--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|380029382|ref|XP_003698353.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Apis florea]
Length = 772
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A A TGSGKTA FLIP+ L+ + G RA+I+ PTRELA QT L
Sbjct: 73 GRDIVAMARTGSGKTACFLIPLFEKLKTRQAKAGARALILSPTRELALQTLKFIKELGRF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+A +I +F D+LI TP + +++ ++MD L L N+E+++ DE
Sbjct: 133 TGLKATLILGGDNMENQFSAIHGNP-DILIATPGRFLHICVEMD---LQLNNIEYVVFDE 188
Query: 167 SDKLFEAG 174
+D+LFE G
Sbjct: 189 ADRLFEMG 196
>gi|344279740|ref|XP_003411645.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX27-like [Loxodonta africana]
Length = 822
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 280 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 339
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 340 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 392
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 393 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 448
Query: 221 INV 223
I V
Sbjct: 449 IFV 451
>gi|322787030|gb|EFZ13254.1| hypothetical protein SINV_10425 [Solenopsis invicta]
Length = 775
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTA FLIP+ L+ + G RA+I+ PTRELA QT L
Sbjct: 73 GRDVVAMARTGSGKTACFLIPLFEKLKARQAKAGARALILSPTRELALQTLKFIKELGRF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
G +A VI ++F D+++ TP + +++ ++MD L L NVE+++ DE
Sbjct: 133 TGFKASVILGGDSMDDQFNAIHGNP-DIIVATPGRFLHICVEMD---LQLKNVEYVVFDE 188
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +Q+ I
Sbjct: 189 ADRLFEM---GFGEQIQEI 204
>gi|357147783|ref|XP_003574483.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 29-like
[Brachypodium distachyon]
Length = 851
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFL+P++ L R G RA+I+ PTR+LA QT +L +
Sbjct: 92 GLDVAAMARTGSGKTAAFLVPMLQRLRRRDPGAGIRALILSPTRDLAMQTLKFAHQLGKF 151
Query: 108 LGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL+ I G I E A D++I TP +LV++L M L+L +VE+++
Sbjct: 152 TGLKTEAIVGGGSIDSQFEIL----ADNPDIIIATPGRLVHILTM-VNDLSLRSVEYVVF 206
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
DE+D LF GF +QL I S + +FSAT + +A++ + L+
Sbjct: 207 DEADSLFSL---GFAEQLHTILQKLSD-TRQTLLFSATMPKALAEFAKAGLR 254
>gi|357028767|ref|ZP_09090792.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
gi|355537467|gb|EHH06723.1| DEAD/DEAH box helicase domain-containing protein [Mesorhizobium
amorphae CCNWGS0123]
Length = 482
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 102/180 (56%), Gaps = 13/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR IF A TGSGKTAAF +PI+ + G K RA+I+ PTRELA Q + L
Sbjct: 58 GRDIFGIAQTGSGKTAAFALPILSKIIALGTKRRAKTTRALILAPTRELAVQIEDTIKIL 117
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G + A V+G + + ++ + A D+LI TP +L L++ L L++ +WL+
Sbjct: 118 AKGAHVSTALVLGGVSRFSQV--KKVAPGVDILIATPGRLTDLVREGD--LILSDTKWLV 173
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE D++ + GF + + I A + P+ + +FSAT +++A+ + LK V+I V
Sbjct: 174 LDEGDRMLDM---GFINDVKRI-AKATAPDRQTALFSATMPDEIAELAKGLLKNPVRIEV 229
>gi|260791488|ref|XP_002590761.1| hypothetical protein BRAFLDRAFT_218590 [Branchiostoma floridae]
gi|229275957|gb|EEN46772.1| hypothetical protein BRAFLDRAFT_218590 [Branchiostoma floridae]
Length = 372
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 17/176 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A A TGSGKT AFLIP + + P+N G +++ PTRELA QTY L
Sbjct: 47 GRDILAAAKTGSGKTLAFLIPAVELMYKLKFMPRN-GTGVIVLSPTRELAMQTYGV---L 102
Query: 105 SEGLGLRAHVIGKIQQAAEKF--GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
E L H G I + + A+ ++++ TP +L+ +Q + P N++ L
Sbjct: 103 KELLKYHCHTYGLIMGGTSRSSEADKLAKGINIVVATPGRLLDHMQ-NTPQFMFKNLQCL 161
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++DE+D++ E GF ++L I P ++ M FSAT T + R LKR
Sbjct: 162 VIDEADRILEV---GFEEELKQIVRLL--PKRRQTMLFSATQTRKIEDLARVSLKR 212
>gi|431914219|gb|ELK15477.1| ATP-dependent RNA helicase DDX54 [Pteropus alecto]
Length = 942
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 98/168 (58%), Gaps = 14/168 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIV 164
GL+ +I + ++F SA + D++I TP +L+++ ++M+ L L +VE+++
Sbjct: 193 TGLKTALILGGDKMEDQF---SALHENPDIIIATPGRLMHVAVEMN---LKLQSVEYVVF 246
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
DE+D+LFE GF +QL I + G + +FSAT + + ++ R
Sbjct: 247 DEADRLFEM---GFAEQLQEIISRLPG-GQQTVLFSATLPKMLVEFAR 290
>gi|13384106|gb|AAK21271.1| RNA helicase-like protein [Homo sapiens]
Length = 561
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 19 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 78
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 79 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 131
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 132 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 187
Query: 221 INVG 224
I V
Sbjct: 188 IFVN 191
>gi|312375048|gb|EFR22493.1| hypothetical protein AND_15188 [Anopheles darlingi]
Length = 879
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
LGR I CA TG+GKTAA+++P + L N R +++ PTREL Q Y +L
Sbjct: 244 LGRDICGCAATGTGKTAAYMLPTLERLLYKPNAAQAVTRVLVLVPTRELGAQVYQVAKQL 303
Query: 105 SEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ + + IG K Q+A + P D++I TP +L+ ++ + P+ +L ++
Sbjct: 304 TQFTNVEVGIAIGGLDVKAQEAVLRTNP------DIVIATPGRLIDHIK-NTPSFSLDSI 356
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
E LI+DE+D++ + F +Q+ I +CS + +FSAT TE+V LK+ V
Sbjct: 357 EILILDEADRMLD---EYFAEQMKEIIRSCSATR-QTMLFSATMTEEVKDLAAVSLKKPV 412
Query: 220 QI 221
+I
Sbjct: 413 KI 414
>gi|125555617|gb|EAZ01223.1| hypothetical protein OsI_23250 [Oryza sativa Indica Group]
Length = 523
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 23/191 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH---SLR-GPKNLGFRAVIVCPTRELAKQTYN---E 100
LG + A A TGSGKT AFLIP I LR P+N G +++CPTRELA QT+N E
Sbjct: 122 LGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRN-GTGVIVLCPTRELAIQTHNVAKE 180
Query: 101 TVRL-SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+R S+ LG +VIG I E + A+ +VL+ TP +L+ +Q + +
Sbjct: 181 LMRYHSQTLG---YVIGGIDLRGE--AEQLAKGINVLVATPGRLLDHMQ-KTKSFKYECL 234
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR-----RK 214
+ LI+DE+D++ E + F +Q+ I+ + +FSAT TE V + + ++
Sbjct: 235 KCLIIDEADRILE---QNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKE 291
Query: 215 LKRRVQINVGL 225
++R + VG+
Sbjct: 292 ERQRTLVYVGV 302
>gi|125597456|gb|EAZ37236.1| hypothetical protein OsJ_21574 [Oryza sativa Japonica Group]
Length = 523
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 23/191 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH---SLR-GPKNLGFRAVIVCPTRELAKQTYN---E 100
LG + A A TGSGKT AFLIP I LR P+N G +++CPTRELA QT+N E
Sbjct: 122 LGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRN-GTGVIVLCPTRELAIQTHNVAKE 180
Query: 101 TVRL-SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+R S+ LG +VIG I E + A+ +VL+ TP +L+ +Q + +
Sbjct: 181 LMRYHSQTLG---YVIGGIDLRGE--AEQLAKGINVLVATPGRLLDHMQ-KTKSFKYECL 234
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR-----RK 214
+ LI+DE+D++ E + F +Q+ I+ + +FSAT TE V + + ++
Sbjct: 235 KCLIIDEADRILE---QNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKE 291
Query: 215 LKRRVQINVGL 225
++R + VG+
Sbjct: 292 ERQRTLVYVGV 302
>gi|426247766|ref|XP_004017647.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Ovis aries]
Length = 864
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 280
>gi|444723055|gb|ELW63720.1| ATP-dependent RNA helicase DDX54 [Tupaia chinensis]
Length = 937
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTRSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+D+LFE GF +QL I + G + + +FSAT + + ++ R
Sbjct: 249 ADRLFEM---GFAEQLQEILSRLPGGH-QTVLFSATLPKMLVEFAR 290
>gi|157960630|ref|YP_001500664.1| ATP-dependent RNA helicase SrmB [Shewanella pealeana ATCC 700345]
gi|157845630|gb|ABV86129.1| DEAD/DEAH box helicase domain protein [Shewanella pealeana ATCC
700345]
Length = 411
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 12/141 (8%)
Query: 50 RQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRA--VIVCPTRELAKQTYNETVRLSE 106
R I A APTG+GKTA+FL+P + H + P+ G RA +I+ PTRELA Q + L+
Sbjct: 42 RDILARAPTGTGKTASFLLPALQHLIDFPRRYGGRARVLILTPTRELASQIHRYASHLAT 101
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSA---QKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
GLGL +I +GP+ + D+L+ TP +L+ L D N VE LI
Sbjct: 102 GLGLDTVII----TGGVPYGPQEEALQKNVDILVATPGRLMEYL--DKGHFNAEEVEVLI 155
Query: 164 VDESDKLFEAGVRGFRDQLAV 184
+DE+D++ + G + +A+
Sbjct: 156 IDEADRMLDMGFSAVVESIAI 176
>gi|383786573|ref|YP_005471142.1| DNA/RNA helicase [Fervidobacterium pennivorans DSM 9078]
gi|383109420|gb|AFG35023.1| DNA/RNA helicase, superfamily II [Fervidobacterium pennivorans DSM
9078]
Length = 548
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ I A A TG+GKTAAF IPI+ + + +A+IV PTRELA Q Y E L
Sbjct: 53 KDIIAQAQTGTGKTAAFAIPILELVDFKVDKSIKALIVTPTRELALQIYEEIKSLKGNRR 112
Query: 110 LR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ A V G Q+ E+ A+ D+++ TP +L L ++ L+L+NV++L++DE+D
Sbjct: 113 IKVATVYG--GQSMERQLKDLARGIDIVVGTPGRL--LDHINRKTLDLSNVKYLVLDEAD 168
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
++ + G D L +I P KR +FSAT +++ R+ +K
Sbjct: 169 RMLDMGF--LDDVLEIIKQT---PETKRTFLFSATMPKEIVSIARKFMK 212
>gi|410897405|ref|XP_003962189.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Takifugu
rubripes]
Length = 649
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 93/177 (52%), Gaps = 17/177 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT AFLIP +I+ L+ P+N G VI+ PTRELA QTY L
Sbjct: 194 GRDVLAAAKTGSGKTLAFLIPCIELIYKLKFMPRN-GTGVVILSPTRELAMQTYG---VL 249
Query: 105 SEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
E + H G I + + R A ++L+ TP +L+ LQ + P N++ L
Sbjct: 250 KELMTHHVHTYGLIMGGSNRSAEAQRLANGVNILVATPGRLLDHLQ-NTPGFMFKNLQCL 308
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRR 218
I+DE+D++ E GF ++L I P ++ +FSAT T V R LK+
Sbjct: 309 IIDEADRILEV---GFEEELKQIIKLL--PKRRQTLLFSATQTRRVEDLARISLKKE 360
>gi|399218830|emb|CCF75717.1| unnamed protein product [Babesia microti strain RI]
Length = 486
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 21/184 (11%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG-------PKNLGFRAVIVCPTRELAKQTYNE 100
LG I +PTGSGKT A+LIP++ L+ P+ L R++I+ TRELA Q ++
Sbjct: 148 LGSDILGISPTGSGKTLAYLIPLLIKLQAFNISNWNPQKLSIRSLIIAHTRELAHQI-DK 206
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ L G G++ V+ K + D+ I+TP L+ LL+ +NL +
Sbjct: 207 IILLLTGFGIKCSVLRKKNT--------ELTRLDICISTPLTLIKLLR--DGNINLNYCK 256
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+DKLF+ GF Q+ I + N++R +FSAT V K + +
Sbjct: 257 ILIMDEADKLFDL---GFESQIDEILSFLPKENVQRLLFSATMHGKVRKLVNSIMIDYYK 313
Query: 221 INVG 224
I VG
Sbjct: 314 ILVG 317
>gi|395798906|ref|ZP_10478189.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|421139467|ref|ZP_15599506.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
gi|395337140|gb|EJF68998.1| DEAD/DEAH box helicase [Pseudomonas sp. Ag1]
gi|404509383|gb|EKA23314.1| ATP-dependent RNA helicase SrmB [Pseudomonas fluorescens BBc6R8]
Length = 448
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF D + + C N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFADDVQRLVQECV--NRQQTMLFSAT 185
>gi|294055756|ref|YP_003549414.1| DEAD/DEAH box helicase [Coraliomargarita akajimensis DSM 45221]
gi|293615089|gb|ADE55244.1| DEAD/DEAH box helicase domain protein [Coraliomargarita akajimensis
DSM 45221]
Length = 406
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TG+GKTAAF +P +H L + K R +++ PTRELA Q + + +
Sbjct: 39 GRDVIGSAQTGTGKTAAFALPALHRLGKHQKGAAPRCLVLGPTRELAAQVKEQFEKYGKD 98
Query: 108 LGLRAHVI------GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L+ +I G+ +Q E DV+I TP +L+ +Q +L NV+
Sbjct: 99 AQLKCALIHGGVGYGRQRQELEAGA-------DVVIATPGRLIDHVQQ--RTADLRNVDL 149
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
LI+DE D++ + GF D + I CS + +FSAT +E++ + R LK V++
Sbjct: 150 LILDEVDRMLDM---GFIDDVKKIIKFCSKQGRQTLLFSATVSEEIKRLIARSLKDPVEV 206
Query: 222 NVGLR 226
+ ++
Sbjct: 207 AIAVK 211
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + L G AVI+ PTRELA Q Y E R
Sbjct: 461 GRNLIGIAKTGSGKTLAFLLPMFRHIMDQDPLEADDGPLAVIMSPTRELAMQIYKECKRF 520
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
L +R + G +Q AE R A+ +++ TP +++ +L + + NL
Sbjct: 521 CRALNVRGVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLTANSGRVTNLRRC 575
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L + +
Sbjct: 576 TYVVLDEADRMFDM---GFEPQVMRIVDNIR-PDRQTVMFSATFPRQMEALARRILNKPL 631
Query: 220 QINVGLR 226
++ VG R
Sbjct: 632 EVQVGGR 638
>gi|380089262|emb|CCC12821.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 580
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---------RAVIVCPTRELAKQTYN 99
GR + A TGSGKT AF +P + SL F RAVIV PTRELA QT+
Sbjct: 182 GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 241
Query: 100 ETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +GL A I G + ++ D++ TP +L L +++LAN
Sbjct: 242 ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEG--SISLAN 299
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLK 216
V + ++DE+D++ + RGF + + +I + C P KR MF+AT D+ K +
Sbjct: 300 VSFAVLDEADRMLD---RGFSEDIKMILSECP-PREKRQTLMFTATWPLDIQKLAESYMI 355
Query: 217 RRVQINVGLR 226
Q+ +G R
Sbjct: 356 NPAQVTIGHR 365
>gi|241949729|ref|XP_002417587.1| ATP-dependent, RNA helicase, putative [Candida dubliniensis CD36]
gi|223640925|emb|CAX45242.1| ATP-dependent, RNA helicase, putative [Candida dubliniensis CD36]
Length = 538
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVI-VCPTRELAKQTYNETVRLSEG 107
+ + A TGSGKT AF +P I+++ N +V+ + PTRELA Q Y+ + L+
Sbjct: 164 NKDVIGVAETGSGKTFAFGVPAINNIITTGNTNTLSVLCISPTRELALQIYDNLIELTAD 223
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G+ V G + + + R + +V++ TP +LV L+ + A+NL NV +L++DE
Sbjct: 224 SGVNCVAVYGGVSKDDQ---IRKLKTANVVVATPGRLVDLI--NDGAINLGNVNYLVLDE 278
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + I + + + MF+AT ++V + + V++ VG R
Sbjct: 279 ADRMLE---KGFEEDIKTIISNTNNAKRQTLMFTATWPKEVRELANNFMNSPVKVTVGDR 335
>gi|358416383|ref|XP_615157.5| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
Length = 885
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 142 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 201
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 202 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 257
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 258 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 289
>gi|308454438|ref|XP_003089847.1| hypothetical protein CRE_06212 [Caenorhabditis remanei]
gi|308268147|gb|EFP12100.1| hypothetical protein CRE_06212 [Caenorhabditis remanei]
Length = 820
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P+ G AVI+ PTRELA QTY E +
Sbjct: 183 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 242
Query: 105 SEGLGLRAHV----IGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
++ LGLR +G +Q A+ K G ++++ TP +++ +L + + NL
Sbjct: 243 AKVLGLRVACTYGGVGISEQIADLKRGA------EIVVCTPGRMIDVLAANSGKVTNLRR 296
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V +L++DE+D++F+ +GF Q+ + P+ + +FSAT + R+ L++
Sbjct: 297 VTYLVLDEADRMFD---KGFEPQIMKVVNNIR-PDKQTVLFSATFPRHMEALARKVLEKP 352
Query: 219 VQINVG 224
V+I VG
Sbjct: 353 VEILVG 358
>gi|297484847|ref|XP_002694562.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Bos taurus]
gi|296478588|tpg|DAA20703.1| TPA: DEAD box RNA helicase DP97-like [Bos taurus]
Length = 876
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 280
>gi|297605959|ref|NP_001057788.2| Os06g0535100 [Oryza sativa Japonica Group]
gi|255677118|dbj|BAF19702.2| Os06g0535100 [Oryza sativa Japonica Group]
Length = 500
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 104/191 (54%), Gaps = 23/191 (12%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIH---SLR-GPKNLGFRAVIVCPTRELAKQTYN---E 100
LG + A A TGSGKT AFLIP I LR P+N G +++CPTRELA QT+N E
Sbjct: 122 LGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRN-GTGVIVLCPTRELAIQTHNVAKE 180
Query: 101 TVRL-SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+R S+ LG +VIG I E + A+ +VL+ TP +L+ +Q + +
Sbjct: 181 LMRYHSQTLG---YVIGGIDLRGE--AEQLAKGINVLVATPGRLLDHMQK-TKSFKYECL 234
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR-----RK 214
+ LI+DE+D++ E + F +Q+ I+ + +FSAT TE V + + ++
Sbjct: 235 KCLIIDEADRILE---QNFEEQMKQIFKLLPRQGRQTVLFSATQTEKVEDFAKLTFGSKE 291
Query: 215 LKRRVQINVGL 225
++R + VG+
Sbjct: 292 ERQRTLVYVGV 302
>gi|226229150|ref|YP_002763256.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
gi|226092341|dbj|BAH40786.1| ATP-dependent RNA helicase RhlE [Gemmatimonas aurantiaca T-27]
Length = 498
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + ACA TGSGKT AFL+PI+H L RA+++ PTRELA Q ++
Sbjct: 40 GRDVLACAMTGSGKTYAFLLPILHQLMSKPRGNTRALVLTPTRELAAQILESLQDVTTHT 99
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L A V G + ++ RS DV++ TP +L+ + P L +E+L++DE+
Sbjct: 100 PLTGAAVFGGVGMGPQEHAFRSG--VDVIVATPGRLLDHFRQ--PYAKLDQLEYLVLDEA 155
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINV 223
D++ + GF ++ I PN KR FSAT +A + L + V +N+
Sbjct: 156 DRMLDM---GFLPEIKKILRHL--PNRKRQTLFFSATMPPPIAALTQEMLNKPVTLNL 208
>gi|452844095|gb|EME46029.1| hypothetical protein DOTSEDRAFT_168285 [Dothistroma septosporum
NZE10]
Length = 465
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP ++HSLR P+N G ++V PTRELA Q + L
Sbjct: 26 GRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFKPRN-GTGVIVVSPTRELALQIFGVAREL 84
Query: 105 ----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ G+ VIG + AE + A+ ++LI TP +L+ LQ + NV+
Sbjct: 85 MEHHSQTFGI---VIGGANRRAE--AEKLAKGVNLLIATPGRLLDHLQ-NTQGFVFKNVK 138
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
L++DE+D++ E GF D++ I + + +FSAT T V R L+
Sbjct: 139 ALVIDEADRILEV---GFEDEMRQIVKILPKEDRQTMLFSATQTTKVEDLARISLR 191
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 338 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQ 397
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+ETV+ + LG++ ++G Q+ E+ G R Q +V+I TP +L+ L+ LN
Sbjct: 398 IEDETVKFAHYLGIKVVSIVGG--QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 455
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+ + A NLK MF
Sbjct: 456 QCN--YVVLDEADRMIDM---GFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMF 510
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 511 SATMPPAVERLARKYLRNPVVVTIG 535
>gi|403282331|ref|XP_003932605.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Saimiri
boliviensis boliviensis]
Length = 765
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 104/189 (55%), Gaps = 30/189 (15%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ GL L++ Q+AA + P D+LI TP +L+ L + P+
Sbjct: 283 QFCNITTCLAVGGLDLKS------QEAALRAAP------DILIATPGRLIDHLH-NCPSF 329
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+L+++E LI+DE+D++ + F +Q+ I CS + + +FSAT T++V
Sbjct: 330 HLSSIEVLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVS 385
Query: 215 LKRRVQINV 223
LK V+I V
Sbjct: 386 LKNPVRIFV 394
>gi|356506148|ref|XP_003521849.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29-like
[Glycine max]
Length = 778
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 98/170 (57%), Gaps = 9/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFL+P++H L P++ G RA+I+ PTR+LA QT T L
Sbjct: 55 GSDVVAMARTGSGKTAAFLVPMLHRLNQHIPQS-GVRALILSPTRDLALQTLKFTKELGH 113
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR ++ +F AQ D++I TP +L++ L + ++L +VE+++ DE
Sbjct: 114 FTDLRVSLLVGGDSMEIQF-EELAQSPDIIIATPGRLMHHLS-EVDDMSLRSVEYVVFDE 171
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D LF G+ GF +QL I A G N + +FSAT +A++ + L+
Sbjct: 172 ADCLF--GM-GFAEQLHQILAQL-GENRQTLLFSATLPSALAEFAKAGLR 217
>gi|68465332|ref|XP_723365.1| hypothetical protein CaO19.12334 [Candida albicans SC5314]
gi|46445394|gb|EAL04663.1| hypothetical protein CaO19.12334 [Candida albicans SC5314]
Length = 564
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVI-VCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I+++ N +V+ + PTRELA Q Y+ + L+
Sbjct: 190 GKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLSVLCISPTRELALQIYDNLIELTAD 249
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G+ V G + + + R + +V++ TP +LV L+ + A+NL V +L++DE
Sbjct: 250 SGVNCVAVYGGVSKDDQ---IRKLKTANVVVATPGRLVDLI--NDGAINLGKVNYLVLDE 304
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + I + S + MF+AT ++V + + V++ VG R
Sbjct: 305 ADRMLE---KGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDR 361
>gi|440898266|gb|ELR49795.1| ATP-dependent RNA helicase DDX54 [Bos grunniens mutus]
Length = 872
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 280
>gi|424778096|ref|ZP_18205049.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
gi|422887089|gb|EKU29499.1| ATP-dependent RNA helicase [Alcaligenes sp. HPC1271]
Length = 414
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-------PKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI++ L P RA+++ PTRELA Q
Sbjct: 5 GRDVMGAAQTGTGKTAAFSLPILNRLMAHATTSASPARHPVRALVLTPTRELADQVAESI 64
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ + LR+ V+ G + +K R + +++I TP +L L +D +NL+ V
Sbjct: 65 ALYSKSVPLRSTVVFGGVDIGPQKEALR--RGVEIVIATPGRL--LDHIDQRTINLSQVS 120
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + G D++ + P ++G +FSAT ++++ K R L V
Sbjct: 121 ILVLDEADRMLDMGFLPDLDRIVSLL-----PKNRQGLLFSATFSKEIRKLARNFLNDPV 175
Query: 220 QINVGLR 226
+I V R
Sbjct: 176 EIEVAAR 182
>gi|395500069|ref|ZP_10431648.1| DEAD/DEAH box helicase [Pseudomonas sp. PAMC 25886]
Length = 448
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 92/162 (56%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF D + + C N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFADDVQRLVQECV--NRQQTMLFSAT 185
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 242 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQ 301
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+ETV+ + LG++ ++G Q+ E+ G R Q +V+I TP +L+ L+ LN
Sbjct: 302 IEDETVKFAHYLGIKVVSIVGG--QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 359
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+ + A NLK MF
Sbjct: 360 QCN--YVVLDEADRMIDM---GFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMF 414
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 415 SATMPPAVERLARKYLRNPVVVTIG 439
>gi|340960309|gb|EGS21490.1| hypothetical protein CTHT_0033480 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 924
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I L+ G RA+++ P+RELA QT L +G
Sbjct: 128 RDVVGMARTGSGKTAAFVIPMIERLKAHSARFGARALVLSPSRELALQTLKVVKELGKGT 187
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG A D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 188 DLKTVLLVGGDSLEEQFG-LMATNPDIIIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 243
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P+ + +FSAT + ++ R L+
Sbjct: 244 DRLFEM---GFAAQLTEILHALP-PSRQTLLFSATLPSSLVEFTRAGLQ 288
>gi|219119587|ref|XP_002180550.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408023|gb|EEC47958.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 552
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 101/190 (53%), Gaps = 21/190 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RG----PKNLGFR----AVIVCPTRELAKQTY 98
GR + ACA TGSGKTA FL PII S+ RG P+N R A+++ PTRELA+Q +
Sbjct: 159 GRDLMACAQTGSGKTAGFLFPIIMSMIKRGGSDPPENARRRIYPEALVLAPTRELAQQIH 218
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLA 157
E R + G+ + VI ++ R ++ D+L+ TP +LV L++ L +
Sbjct: 219 EEAKRFTYATGIASVVIYGGANVGDQL--REMERGCDLLVATPGRLVDLIER--GRLGME 274
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP---NLKRGMFSATHTEDVAKWCRRK 214
+V +L++DE+D++ + GF Q+ I P + + MFSAT ++ +
Sbjct: 275 SVSFLVLDEADRMLDM---GFEPQIRRIVEESGMPGGIDRQTMMFSATFPANIQRLASDF 331
Query: 215 LKRRVQINVG 224
++ V + VG
Sbjct: 332 MRDYVFLTVG 341
>gi|440794934|gb|ELR16079.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 972
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 30/193 (15%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + CA TGSGKT AFL+P++ H L P G +I+ PTRELA Q + + +
Sbjct: 280 GRDLIGCAKTGSGKTLAFLLPMLRHILDQPHLEPGEGPIGLIMAPTRELALQIHRDAKKF 339
Query: 105 SEGLGLR----------AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+G+GLR A I K++ AE +++ TP +++ +L + +
Sbjct: 340 CKGIGLRSICVYGGSVVADQISKLKAGAE-----------IVVCTPGRMIDILSTNSGRI 388
Query: 155 -NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
NL V ++++DE+D++F+ GF Q+ I P+ + MFSAT V R+
Sbjct: 389 CNLRRVTFVVLDEADRMFDM---GFEPQIMKILENVR-PDRQTVMFSATFPRPVETAARK 444
Query: 214 KLKRRVQINVGLR 226
L++ ++I VG R
Sbjct: 445 ILQKPLEIVVGTR 457
>gi|407041638|gb|EKE40867.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 578
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHS-LRGP-----KNLGFR------AVIVCPTRELAKQT 97
R + +CA TGSGKTAAFL PII L+ P N R A+I+ PTREL +Q
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228
Query: 98 YNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
Y E VR +E +R+ + + + + D+L+ TP +L+Y + ++L+
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQ-EMGKGCDILVATPGRLLYFTEKK--IVSLS 285
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRG--MFSATHTEDVAKWCRRK 214
+V +LI DE+D++ + GF Q+ I P + KR MFSAT + + +
Sbjct: 286 SVRYLIFDEADRMLDM---GFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADF 342
Query: 215 LKRRVQINVG 224
L V I VG
Sbjct: 343 LDDYVFITVG 352
>gi|423687836|ref|ZP_17662639.1| ATP-dependent RNA helicase [Vibrio fischeri SR5]
gi|371493024|gb|EHN68628.1| ATP-dependent RNA helicase [Vibrio fischeri SR5]
Length = 445
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNETVRLS 105
G+ + A + TGSGKT AF++P++H K+ RAVI+ PTRELAKQ Y+ +
Sbjct: 38 GKDVLASSKTGSGKTLAFVLPMLHKSLKTKSFSKNDPRAVILAPTRELAKQVYSHLRAML 97
Query: 106 EGLGLRAHVIGKIQQAAEKFGP-RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL A +I + ++ R KF ++ TP +L L+ +L L +E LI+
Sbjct: 98 GGLTYDATLITGGENFNDQVNALRKHPKF--IVATPGRLADHLEH--QSLYLDGLETLIL 153
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTED-VAKWCRRKLKRRVQINV 223
DE+D++ + GF + L I+ A S + MFSAT D V K+ L +I+V
Sbjct: 154 DEADRMLDL---GFAEHLQKIHKAASHRRRQTLMFSATLDHDAVNKFAGNMLDNPKRISV 210
Query: 224 GL 225
GL
Sbjct: 211 GL 212
>gi|334322878|ref|XP_003340311.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Monodelphis
domestica]
Length = 730
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELDPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL---KRR 218
L+ DE+D++F+ GF Q+ I A+ P+ + +FSAT + + K R L R
Sbjct: 404 LVFDEADRMFDM---GFEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRV 459
Query: 219 VQINVG 224
VQ ++G
Sbjct: 460 VQGDIG 465
>gi|68464953|ref|XP_723554.1| hypothetical protein CaO19.4870 [Candida albicans SC5314]
gi|74656726|sp|Q5APT8.1|DBP3_CANAL RecName: Full=ATP-dependent RNA helicase DBP3
gi|46445590|gb|EAL04858.1| hypothetical protein CaO19.4870 [Candida albicans SC5314]
Length = 564
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVI-VCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I+++ N +V+ + PTRELA Q Y+ + L+
Sbjct: 190 GKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLSVLCISPTRELALQIYDNLIELTAD 249
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G+ V G + + + R + +V++ TP +LV L+ + A+NL V +L++DE
Sbjct: 250 SGVNCVAVYGGVSKDDQ---IRKIKTANVVVATPGRLVDLI--NDGAINLGKVNYLVLDE 304
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + I + S + MF+AT ++V + + V++ VG R
Sbjct: 305 ADRMLE---KGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDR 361
>gi|124249330|ref|NP_694705.2| probable ATP-dependent RNA helicase DDX27 [Mus musculus]
gi|341940504|sp|Q921N6.3|DDX27_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|74140985|dbj|BAE22077.1| unnamed protein product [Mus musculus]
gi|74210620|dbj|BAE23664.1| unnamed protein product [Mus musculus]
gi|148674548|gb|EDL06495.1| mCG14602, isoform CRA_c [Mus musculus]
Length = 760
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 220 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 279
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 280 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 332
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 333 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 388
Query: 221 INVG 224
I V
Sbjct: 389 IFVN 392
>gi|354548342|emb|CCE45078.1| hypothetical protein CPAR2_700820 [Candida parapsilosis]
Length = 559
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 100/190 (52%), Gaps = 28/190 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKT AF +P I+++ G +N G + + PTRELA Q Y+ L++
Sbjct: 181 GKDVIGVAETGSGKTFAFGVPAINNIITSGEENPGLSVLCISPTRELALQIYDNLQELTK 240
Query: 107 GLGL----------RAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+ + I KI+Q A +V++ TP +LV L+ + A++L
Sbjct: 241 NTSISCVAIYGGVSKDDQINKIRQGA-----------NVIVATPGRLVDLI--NDGAVDL 287
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+++ +L++DE+D++ E +GF + + I + + N + MF+AT ++V + +
Sbjct: 288 SSINYLVLDEADRMLE---KGFEEDIKHIIGSTNAHNRQTLMFTATWPKEVRELANAFMH 344
Query: 217 RRVQINVGLR 226
V++ +G R
Sbjct: 345 NPVKLTIGDR 354
>gi|256822194|ref|YP_003146157.1| DEAD/DEAH box helicase [Kangiella koreensis DSM 16069]
gi|256795733|gb|ACV26389.1| DEAD/DEAH box helicase domain protein [Kangiella koreensis DSM
16069]
Length = 458
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 19/161 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS-LRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A TGSGKTAAFL+PIIH+ L P ++ R +I+ PTRELA+Q L++
Sbjct: 40 GHDVMVSAETGSGKTAAFLLPIIHNLLENPSRHTSTRVLILAPTRELARQIDKHARDLTQ 99
Query: 107 GLGLRAH-VIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
++ +IG K QQA + P +++I TP ++ L + +L ++E+
Sbjct: 100 FTQIKTGLIIGGADYKYQQAIFRDNP------EIIIATPGRM--LEHCEKQGADLNDLEY 151
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+DK+FE GF D + I C + + +FSAT
Sbjct: 152 LVIDEADKMFEM---GFTDDVQAIAGFCKS-DRQTLLFSAT 188
>gi|427785439|gb|JAA58171.1| Putative atp-dependent rna helicase ddx54 [Rhipicephalus
pulchellus]
Length = 816
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 86/140 (61%), Gaps = 11/140 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A A TGSGKTAAFL+PI+ L R P + G RA+I+ PTRELA QT+ L +
Sbjct: 93 GRDVVAMARTGSGKTAAFLVPILERLGGRSP-HTGPRALILSPTRELALQTHKFAKELGK 151
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVD 165
LR+ VI ++F + D+LI TP + ++ +++M+ L L +V++++ D
Sbjct: 152 FTDLRSTVILGGDSMEDQFEA-IHENPDLLIATPGRFLHVVMEMN---LRLNSVKYVVFD 207
Query: 166 ESDKLFEAGVRGFRDQLAVI 185
E+D+LFE GF++QL +
Sbjct: 208 EADRLFEM---GFQEQLTEV 224
>gi|348551186|ref|XP_003461411.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 2 [Cavia
porcellus]
Length = 876
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKARSGQTGARALVLSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 280
>gi|348551184|ref|XP_003461410.1| PREDICTED: ATP-dependent RNA helicase DDX54-like isoform 1 [Cavia
porcellus]
Length = 875
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKARSGQTGARALVLSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 280
>gi|440902879|gb|ELR53614.1| Putative ATP-dependent RNA helicase DDX27, partial [Bos grunniens
mutus]
Length = 741
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 193 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 252
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 253 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 305
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 306 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 361
Query: 221 INVG 224
I V
Sbjct: 362 IFVN 365
>gi|94265120|ref|ZP_01288885.1| Helicase-like:DEAD/DEAH box helicase-like [delta proteobacterium
MLMS-1]
gi|93454407|gb|EAT04705.1| Helicase-like:DEAD/DEAH box helicase-like [delta proteobacterium
MLMS-1]
Length = 369
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TG+GKTAAF++P++ L GP+ RAVIV PTRELA+Q + L
Sbjct: 38 GRDIMGLAQTGTGKTAAFVLPLLQKLSAGPRGR-VRAVIVAPTRELAEQIHVNIGELGRQ 96
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQK--FDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
G+R+ V G + KFG A K ++++ P +L L +D +NL VE L++
Sbjct: 97 TGIRSVAVYGGV----SKFGQLKAFKAGVEIIVACPGRL--LDHLDSRDVNLGAVEMLVL 150
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR--RVQIN 222
DE+D +F+ G +L + Y NL +FSAT ++ LK RVQIN
Sbjct: 151 DEADMMFDMGFMPAIKKL-LKYLPAKRQNL---LFSATMPAEIRHLADSILKDPARVQIN 206
>gi|357474503|ref|XP_003607536.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
gi|355508591|gb|AES89733.1| hypothetical protein MTR_4g079320 [Medicago truncatula]
Length = 787
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 9/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFL+P++H L P+ G R +I+ PTR+LA+QT T L
Sbjct: 55 GIDVVAMARTGSGKTAAFLVPMLHRLNQHVPQG-GVRGLILSPTRDLAQQTLKFTKELGH 113
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR ++ +F AQ D++I TP +L++ L + ++L VE+++ DE
Sbjct: 114 FTDLRVSLLVGGDSMESQF-EELAQNPDIIIATPGRLMHHLS-EVDDMSLRKVEYVVFDE 171
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D LF G+ GF +QL I A G N + +FSAT +A++ + L+
Sbjct: 172 ADCLF--GM-GFAEQLHQILAQL-GENRQTLLFSATLPSALAEFAKAGLR 217
>gi|388455396|ref|ZP_10137691.1| ATP-dependent RNA helicase RhlE [Fluoribacter dumoffii Tex-KL]
Length = 461
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA+F++P++H L K+ R +I+ PTRELA Q +
Sbjct: 77 GKDVLASAQTGTGKTASFVLPVLHMLSAKPRAKSNRTRVLILTPTRELASQVHESIREYG 136
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR+ V+ G ++ + RS ++L+ TP +L+ L Q A+ V+ LI+
Sbjct: 137 RYLSLRSAVVFGGVKINPQMMKLRSG--VELLVATPGRLLDLFQQR--AIQFDQVDTLIL 192
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++ + G D +I C N + +FSAT T+++ K + L V I+V
Sbjct: 193 DEADRMLDMGF--IHDIRRIIN--CLPKNRQNLLFSATFTDEIRKLVKTILNEPVAIDVT 248
Query: 225 LR 226
R
Sbjct: 249 PR 250
>gi|307214987|gb|EFN89832.1| Probable ATP-dependent RNA helicase DDX27 [Harpegnathos saltator]
Length = 734
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 35/205 (17%)
Query: 41 TITYLSP------------LGRQIFACAPTGSGKTAAFLIPIIHSLR-----GPKNLGFR 83
T+ +L+P +GR I CA TG+GKTAA+++P + L GP R
Sbjct: 172 TMNFLTPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLERLMYKPLDGPAVT--R 229
Query: 84 AVIVCPTRELAKQTYNETVRLSEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLIT 138
+++ PTREL Q Y T +LS+ + + +G K+Q++ + P D++I
Sbjct: 230 VLVLVPTRELGVQVYQVTKQLSQFTSVETGLSVGGLDVKVQESILRRNP------DIVIA 283
Query: 139 TPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM 198
TP +L+ L+ + P +L +E LI+DE+D++ + F +Q+ I CS + +
Sbjct: 284 TPGRLIDHLR-NTPTFSLDIIEVLILDEADRMLD---EYFAEQMKYIVNQCSRSR-QTML 338
Query: 199 FSATHTEDVAKWCRRKLKRRVQINV 223
FSAT TE+V L + ++I V
Sbjct: 339 FSATMTEEVKDLAAVSLDKPIKIFV 363
>gi|429765433|ref|ZP_19297729.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
gi|429186393|gb|EKY27337.1| putative ATP-dependent RNA helicase RhlE [Clostridium celatum DSM
1785]
Length = 426
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 100/181 (55%), Gaps = 15/181 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RG-PKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I CA TG+GKTAAF IPII ++ +G K +A+IV PTRELA Q
Sbjct: 38 GRDILGCAQTGTGKTAAFAIPIIQNIVTAKGNSKERSIKALIVAPTRELAIQIEENFTIY 97
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L ++ VI G + Q ++ + DVL+ TP +L+ L+ + ++L+NV++ +
Sbjct: 98 AKYLDIKNTVIFGGVNQTSQVRKINAG--VDVLVATPGRLLDLV--NQRHIDLSNVKYFV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + G+ D +I P ++ +FSAT ++V K LK V++
Sbjct: 154 LDEADRMLDMGM--IHDVKKII---SKLPKERQNLLFSATMPKEVTKLVNSILKNPVKVE 208
Query: 223 V 223
V
Sbjct: 209 V 209
>gi|355683275|gb|AER97071.1| DEAD box polypeptide 27 [Mustela putorius furo]
Length = 712
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +I+ PTREL Q ++ T +L+
Sbjct: 222 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLILVPTRELGIQVHSVTKQLA 281
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 282 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 334
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 335 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 390
Query: 221 INV 223
I V
Sbjct: 391 IFV 393
>gi|149245944|ref|XP_001527442.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013518|sp|A5DY34.1|DRS1_LODEL RecName: Full=ATP-dependent RNA helicase DRS1
gi|146449836|gb|EDK44092.1| hypothetical protein LELG_02271 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 686
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 92/160 (57%), Gaps = 13/160 (8%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSE 106
LG+ I A A TGSGKTAA+LIPII L KN +A+I+ PTRELA Q ++ +L +
Sbjct: 232 LGKDIVASAQTGSGKTAAYLIPIIERLLYVKNSTSTKAIILTPTRELAIQVHDVGRKLGQ 291
Query: 107 ---GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L V G ++Q ++ R D++I TP +L+ ++ + P+ ++ +V+ L
Sbjct: 292 FVSNLNFGMAVGGLSLKQQEQQLKTRP----DIVIATPGRLIDHIR-NSPSFSVEDVQVL 346
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
I+DE+D++ E GF+++L I + + +FSAT
Sbjct: 347 IIDEADRMLE---EGFQEELTEILSLIPKQKRQTLLFSAT 383
>gi|395513190|ref|XP_003760812.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Sarcophilus
harrisii]
Length = 509
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ +I G + A+ ++K V+I TP +L L+ N+ + +L++DE+
Sbjct: 98 GLKECIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLR-SSSTFNIKKIRFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTE 205
D+L E G F L VI+ A P ++ +FSAT T+
Sbjct: 155 DRLLEQGCTDFTKDLEVIFDA--APTQRQTLLFSATLTD 191
>gi|354547460|emb|CCE44195.1| hypothetical protein CPAR2_504190 [Candida parapsilosis]
Length = 604
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKTAA+LIP+I L +A+I+ PTRELA Q Y+ +L +
Sbjct: 161 LGKDIVAGAQTGSGKTAAYLIPLIERLIFKNATSTKAIILTPTRELAIQVYDVGKKLGQF 220
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L V G ++Q ++ R D++I TP +L+ ++ + P+ ++ +V+ L+
Sbjct: 221 VKNLSFGLAVGGLNLRQQEQQLKSRP----DIVIATPGRLIDHIR-NSPSFSVEDVQVLV 275
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+++L I + + +FSAT V + L + V++
Sbjct: 276 IDEADRMLE---EGFQEELTEILSLIPKQKRQTLLFSATMNTKVQDLVQLSLNKPVRV 330
>gi|407410868|gb|EKF33151.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi marinkellei]
Length = 546
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 21/157 (13%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT +FLIP+ H L+ P G R +I+ PT ELA+Q E L +G
Sbjct: 166 RDVLACAPTGSGKTLSFLIPMFHILKSPNTEAGVRGLIITPTMELAEQIEREAFFLMKGQ 225
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ +Q +S + D+ ITTP ++ +++ ++L N ++L+ DE D
Sbjct: 226 RWKL-----VQHG------QSTRNKDIFITTPRRVFTMIEKK--LIDLGNTQYLVFDEVD 272
Query: 169 KLFEAGVRGFRDQLAV---IYAACSGPNLKRGMFSAT 202
+L+++ D L V I AC+ +F+AT
Sbjct: 273 RLWDSAT----DNLQVVDSILTACTFEEKVVALFTAT 305
>gi|407850251|gb|EKG04705.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi]
Length = 553
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 21/157 (13%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT +FLIP+ H L+ P G R +I+ PT ELA+Q E L +G
Sbjct: 166 RDVLACAPTGSGKTLSFLIPMFHILKSPNTEAGVRGLIITPTMELAEQIEREAFFLMKGQ 225
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ G+ S + D+ ITTP ++ +++ ++L N ++L+ DE D
Sbjct: 226 RWKLVQHGQ-----------STRNKDIFITTPRRVFTMIE--KKLIDLGNTQYLVFDEVD 272
Query: 169 KLFEAGVRGFRDQLAV---IYAACSGPNLKRGMFSAT 202
+L+++ D L V I AC+ +F+AT
Sbjct: 273 RLWDSAT----DNLQVVDSILTACTFEEKVVALFTAT 305
>gi|307173483|gb|EFN64393.1| Probable ATP-dependent RNA helicase DDX27 [Camponotus floridanus]
Length = 694
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 25/187 (13%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHS-----LRGPKNLGFRAVIVCPTRELAKQTYNETV 102
+GR I CA TG+GKTAA+++P + L GP R +++ PTREL Q Y T
Sbjct: 150 MGRDICGCAATGTGKTAAYMLPTLERLLYRPLDGPAV--SRVLVLVPTRELGVQVYQVTK 207
Query: 103 RLSE------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+L++ GL + + K+Q++ + P D++I TP +L+ L + P +L
Sbjct: 208 QLTQFTTVEVGLSVGGLDV-KVQESVLRKNP------DIVIATPGRLIDHLN-NAPTFSL 259
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
N+E LI+DE+D++ + F +Q+ I C+ + +FSAT TE+V L
Sbjct: 260 NNIEVLILDEADRMLD---EYFAEQMKYIVKQCARTK-QTILFSATMTEEVKDLAAVSLN 315
Query: 217 RRVQINV 223
++I V
Sbjct: 316 NPIKIFV 322
>gi|238878589|gb|EEQ42227.1| hypothetical protein CAWG_00429 [Candida albicans WO-1]
Length = 529
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVI-VCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I+ + N +V+ + PTRELA Q Y+ + L+
Sbjct: 155 GKDVIGVAETGSGKTFAFGVPAINKIITTGNTKTLSVLCISPTRELALQIYDNLIELTAD 214
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G+ V G + + + R + +V++ TP +LV L+ + A+NL V +L++DE
Sbjct: 215 SGVNCVAVYGGVSKDDQ---IRKIKTANVVVATPGRLVDLI--NDGAINLGKVNYLVLDE 269
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + I + S + MF+AT ++V + + V++ VG R
Sbjct: 270 ADRMLE---KGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDR 326
>gi|195478796|ref|XP_002100656.1| GE17181 [Drosophila yakuba]
gi|194188180|gb|EDX01764.1| GE17181 [Drosophila yakuba]
Length = 1215
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF++P+ + +L G A+I+ PTREL Q + +
Sbjct: 539 GRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDGAIAIIMAPTRELCMQIGKDIRKF 598
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 599 SKSLGLRPVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 653
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR LK+ +
Sbjct: 654 TYVVLDEADRMFDM---GFEPQVMRIIDNVR-PDRQTVMFSATFPRQMEALARRILKKPI 709
Query: 220 QINVGLR 226
++ VG R
Sbjct: 710 EVIVGGR 716
>gi|194894625|ref|XP_001978097.1| GG17877 [Drosophila erecta]
gi|190649746|gb|EDV47024.1| GG17877 [Drosophila erecta]
Length = 1222
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF++P+ + +L G A+I+ PTREL Q + +
Sbjct: 546 GRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDGAIAIIMAPTRELCMQIGKDIRKF 605
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 606 SKSLGLRPVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 660
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ GF Q+ I P+ + MFSAT + RR LK+ +
Sbjct: 661 TYVVLDEADRMFDM---GFEPQVMRIIDNVR-PDRQTVMFSATFPRQMEALARRILKKPI 716
Query: 220 QINVGLR 226
++ VG R
Sbjct: 717 EVIVGGR 723
>gi|154279136|ref|XP_001540381.1| ATP-dependent RNA helicase ded1 [Ajellomyces capsulatus NAm1]
gi|160380637|sp|A6R3L3.1|DED1_AJECN RecName: Full=ATP-dependent RNA helicase DED1
gi|150412324|gb|EDN07711.1| ATP-dependent RNA helicase ded1 [Ajellomyces capsulatus NAm1]
Length = 694
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS---LRGPKNLGFR-----------AVIVCPTRELA 94
GR + ACA TGSGKT FL PI+ RGP+ R A+I+ PTREL
Sbjct: 240 GRDLMACAQTGSGKTGGFLFPILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELV 299
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y+E + L V+ + + + Q +VL+ TP +LV +++ +
Sbjct: 300 SQIYDEARKFCYRTALHPRVVYGGAEMGNQLR-QLDQGCNVLVATPGRLVDMMERG--RI 356
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRGMFSATHTEDVAKWC 211
+LA++++L++DE+D++ + GF Q+ I P+ + MFSAT D+ K
Sbjct: 357 SLAHIQYLVLDEADRMLDM---GFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLA 413
Query: 212 RRKLKRRVQINVG 224
LK + ++VG
Sbjct: 414 EEFLKDHIFLSVG 426
>gi|67475258|ref|XP_653330.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470272|gb|EAL47944.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 578
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHS-LRGP-----KNLGFR------AVIVCPTRELAKQT 97
R + +CA TGSGKTAAFL PII L+ P N R A+I+ PTREL +Q
Sbjct: 169 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 228
Query: 98 YNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
Y E VR +E +R+ + + + + D+L+ TP +L+Y + ++L+
Sbjct: 229 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQ-EMGKGCDILVATPGRLLYFTEKK--IVSLS 285
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRG--MFSATHTEDVAKWCRRK 214
+V +LI DE+D++ + GF Q+ I P + KR MFSAT + + +
Sbjct: 286 SVRYLIFDEADRMLDM---GFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADF 342
Query: 215 LKRRVQINVG 224
L V I VG
Sbjct: 343 LDDYVFITVG 352
>gi|407776571|ref|ZP_11123844.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
gi|407301862|gb|EKF20981.1| DEAD/DEAH box helicase [Nitratireductor pacificus pht-3B]
Length = 456
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 99/184 (53%), Gaps = 21/184 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNL--GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF +PI+ + G K L RA+I+CPTRELA Q +E VR
Sbjct: 47 GRDVLGIAQTGSGKTAAFTMPILSKIMALGTKRLRKTARALILCPTRELAVQ-IDEVVRQ 105
Query: 105 SEGLGLRAH-----VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
L AH V+G + + ++ R AQ DV+I TP +L L++ L+LA
Sbjct: 106 ---LSHHAHLSTALVLGGVSRGSQVR--RLAQGVDVVIATPGRLTDLVRSG--ELSLAET 158
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
WL++DE+D++ + GF + + I A + + +FSAT ++ + LK V
Sbjct: 159 RWLVLDEADRMLDM---GFINDVRRIARATHA-DRQTALFSATMPREIEQLAASLLKEPV 214
Query: 220 QINV 223
++ V
Sbjct: 215 RVEV 218
>gi|71420983|ref|XP_811671.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70876358|gb|EAN89820.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 553
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 21/157 (13%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + ACAPTGSGKT +FLIP+ H L+ P G R +I+ PT ELA+Q E L +G
Sbjct: 166 RDVLACAPTGSGKTLSFLIPMFHILKSPNTEAGVRGLIITPTMELAEQIEREAFFLMKGQ 225
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+ +Q +S + D+ ITTP ++ +++ ++L N ++L+ DE D
Sbjct: 226 RWKL-----VQHG------QSTRNKDIFITTPRRVFTMIEKK--LIDLGNTQYLVFDEVD 272
Query: 169 KLFEAGVRGFRDQLAV---IYAACSGPNLKRGMFSAT 202
+L+++ D L V I AC+ +F+AT
Sbjct: 273 RLWDSAT----DNLQVVDSILTACTFEEKVVALFTAT 305
>gi|393759582|ref|ZP_10348395.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393162143|gb|EJC62204.1| ATP-dependent RNA helicase [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 414
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 98/187 (52%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-------PKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI++ L P RA+++ PTRELA Q
Sbjct: 5 GRDVMGAAQTGTGKTAAFSLPILNRLMAHATTSASPARHPVRALVLTPTRELADQVAESI 64
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ + LR+ V+ G + +K R + +++I TP +L L +D +NL+ V
Sbjct: 65 ALYSKSVPLRSTVVFGGVDIGPQKEALR--RGVEIVIATPGRL--LDHIDQRTINLSQVS 120
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + G D++ + P ++G +FSAT ++++ K R L V
Sbjct: 121 ILVLDEADRMLDMGFLPDLDRIVSLL-----PKNRQGLLFSATFSKEIRKLARTFLNDPV 175
Query: 220 QINVGLR 226
+I V R
Sbjct: 176 EIEVAAR 182
>gi|449477372|ref|XP_004176637.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Taeniopygia guttata]
Length = 849
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTA FLIP+ L+ P G RA+I+ PTRELA QT T L +
Sbjct: 99 GRDVVAMARTGSGKTACFLIPMFERLKAPSQAGARALILSPTRELALQTLKFTKELGKFT 158
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
GL+ +I + ++F + D+ + T +LV++ ++M L VE+++ DE+
Sbjct: 159 GLKTALILGGDKMEDQFAALH-ENPDMXVGTTGRLVHVAVEM---KQKLHTVEYVVFDEA 214
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF +QL I A P+ + +FSAT
Sbjct: 215 DRLFEM---GFAEQLQEIIARL--PDCHQTVLFSAT 245
>gi|348528897|ref|XP_003451952.1| PREDICTED: ATP-dependent RNA helicase DDX18 [Oreochromis niloticus]
Length = 656
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 25/226 (11%)
Query: 5 LTIALGIFTIGFVISIIV-TTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSG 61
LT A + + SI+ TL V F+H + PL GR + A A TGSG
Sbjct: 155 LTGAFEDTSFASLASIVSENTLKGVKGMGFEHM-TEIQHKSIRPLLEGRDVLAAAKTGSG 213
Query: 62 KTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGK 117
KT AFLIP +I+ L+ P+N G +I+ PTRELA QTY L E + H G
Sbjct: 214 KTLAFLIPCIELIYKLKFMPRN-GTGVIILSPTRELAMQTYG---VLKELMTHHVHTYGL 269
Query: 118 IQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEA 173
I + + AQK ++++ TP +L+ LQ + P N++ LI+DE+D++ E
Sbjct: 270 IMGGSNRSA--EAQKLANGVNIVVATPGRLLDHLQ-NTPGFMYKNLQCLIIDEADRILEV 326
Query: 174 GVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRR 218
GF ++L I P ++ M FSAT T V R LK+
Sbjct: 327 ---GFEEELKQIIKLL--PKRRQTMLFSATQTRKVEDLARISLKKE 367
>gi|240281206|gb|EER44709.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus H143]
gi|325092298|gb|EGC45608.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus H88]
Length = 694
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS---LRGPKNLGFR-----------AVIVCPTRELA 94
GR + ACA TGSGKT FL PI+ RGP+ R A+I+ PTREL
Sbjct: 240 GRDLMACAQTGSGKTGGFLFPILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELV 299
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y+E + L V+ + + + Q +VL+ TP +LV +++ +
Sbjct: 300 SQIYDEARKFCYRTALHPRVVYGGAEMGNQLR-QLDQGCNVLVATPGRLVDMMERG--RI 356
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRGMFSATHTEDVAKWC 211
+LA++++L++DE+D++ + GF Q+ I P+ + MFSAT D+ K
Sbjct: 357 SLAHIQYLVLDEADRMLDM---GFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLA 413
Query: 212 RRKLKRRVQINVG 224
LK + ++VG
Sbjct: 414 EEFLKDHIFLSVG 426
>gi|194214292|ref|XP_001915035.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Equus caballus]
Length = 860
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+++ PTRELA QT T L +
Sbjct: 113 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALVLSPTRELALQTMKFTKELGKF 172
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 173 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 228
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 229 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 260
>gi|340053299|emb|CCC47587.1| putative ATP-dependent RNA helicase [Trypanosoma vivax Y486]
Length = 857
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 94/159 (59%), Gaps = 16/159 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++H L+ K +G R +I+ PTREL+ Q ++L +
Sbjct: 61 GNDVVAMARTGSGKTAAFLIPMLHLLKSHSKVVGVRGLILSPTRELSMQILRFGIKLGKF 120
Query: 108 LGLR--AHVIGK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A V G ++Q E A D+++ TP +++++ M+ +L L+ V+ L++
Sbjct: 121 LDLRFVALVGGNSLEQQFEML----ASNPDIVVATPGRILHI--MEEASLQLSMVKLLVL 174
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGP-NLKRGMFSAT 202
DE+D+LFE G+ Q +I P + +R +FSAT
Sbjct: 175 DEADRLFELGL-----QPQIIAIMQKLPESCQRALFSAT 208
>gi|157125871|ref|XP_001654429.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108873494|gb|EAT37719.1| AAEL010317-PA [Aedes aegypti]
Length = 804
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
LGR I CA TG+GKTAA+++P + L + R +++ PTREL Q Y + +L
Sbjct: 217 LGRDICGCAATGTGKTAAYMLPTLERLLYKPSAAQAVTRVLVLVPTRELGAQVYQVSKQL 276
Query: 105 SEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ + + IG K Q+A + P DV+I TP +L+ ++ + P+ +L ++
Sbjct: 277 TQFTSIEVGIAIGGLDVKAQEAVLRTNP------DVVIATPGRLIDHIK-NTPSFSLDSI 329
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
E LI+DE+D++ + F +Q+ I +CS + +FSAT T+ V L + V
Sbjct: 330 EVLILDEADRMLD---EYFAEQMKEIIQSCSKTR-QTMLFSATMTDQVKDLAAVSLTKPV 385
Query: 220 QINV 223
++ V
Sbjct: 386 KVFV 389
>gi|326923057|ref|XP_003207758.1| PREDICTED: ATP-dependent RNA helicase DDX18-like [Meleagris
gallopavo]
Length = 703
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 23 TTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-G 76
TL +S+ F H + PL GR I A A TGSGKT AFLIP +I+ L+
Sbjct: 222 NTLKGISDMGFTHMT-EIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFM 280
Query: 77 PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF--- 133
P+N G +I+ PTRELA QTY L E + H G I + + AQK
Sbjct: 281 PRN-GTGVIILSPTRELAMQTYG---VLKEVMNHHVHTYGLIMGGSNRSA--EAQKLGNG 334
Query: 134 -DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP 192
++++ TP +L+ +Q + P N++ L++DE+D++ E GF +++ I P
Sbjct: 335 INIIVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILEV---GFEEEMKQIIKLL--P 388
Query: 193 NLKRGM-FSATHTEDVAKWCRRKLKRR 218
++ M FSAT T V R LK+
Sbjct: 389 KRRQTMLFSATQTRKVEDLARISLKKE 415
>gi|399116636|emb|CCG19443.1| putative ATP-dependent RNA helicase [Taylorella asinigenitalis
14/45]
Length = 444
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 21/211 (9%)
Query: 25 LAVVSNSIFKHFEPHFTITYLSPL-GRQIFACAPTGSGKTAAFLIPIIHSL-------RG 76
L +SN+ + H P +++ L GR + A TG+GKTAAF +P+++ +
Sbjct: 16 LENISNTGYLHATPIQALSFPPILEGRDVMGAAQTGTGKTAAFTLPLLNRMIPKASFSTS 75
Query: 77 PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI-GKIQQAAEKFG-PRSAQKFD 134
P R +++ PTRELA+Q + ++GL LR +I G + A+K R A D
Sbjct: 76 PAKHPVRMLVLTPTRELAEQISKNVIAYADGLPLRTSLIYGGVDFNAQKLELMRGA---D 132
Query: 135 VLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
++I TP +L L ++ +NL VE+LI+DE+D++ + GF L I A P+
Sbjct: 133 IVIATPGRL--LDHVEQRTINLNQVEFLILDEADRMLDM---GFMPDLLKILAQL--PSR 185
Query: 195 KRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
++ ++SAT ++++ ++ L V+I V
Sbjct: 186 RQSLLYSATFSDNIRSLAQKFLHDPVEITVA 216
>gi|348564128|ref|XP_003467857.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like [Cavia
porcellus]
Length = 803
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 261 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 320
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 321 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 373
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V LK V+
Sbjct: 374 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTEEVKDLASVSLKNPVR 429
Query: 221 INV 223
I V
Sbjct: 430 IFV 432
>gi|346972098|gb|EGY15550.1| ATP-dependent RNA helicase DBP3 [Verticillium dahliae VdLs.17]
Length = 603
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR A TGSGKT AF +P++ S+ K +AV+V PTRELA QT+ +T +L+ L
Sbjct: 220 GRDAIGVAETGSGKTMAFALPLVESISKMKKRCIKAVVVSPTRELAMQTHEQTAQLAAHL 279
Query: 109 GLRAHVI--GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
GL++ + G + R A D+++ TP +L M ++L++ + ++DE
Sbjct: 280 GLKSVCVYGGASKDEQRALLQRGA---DIIVATPGRLKDF--MSDGTVDLSHSRFAVLDE 334
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D++ + +GF D + I A ++ MF+AT
Sbjct: 335 ADRMLD---KGFEDDIKAILGAMPAREARQTLMFTAT 368
>gi|94265968|ref|ZP_01289692.1| Helicase-like:DEAD/DEAH box helicase-like [delta proteobacterium
MLMS-1]
gi|93453471|gb|EAT03884.1| Helicase-like:DEAD/DEAH box helicase-like [delta proteobacterium
MLMS-1]
Length = 369
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 95/180 (52%), Gaps = 17/180 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TG+GKTAAF++P++ L GP+ RAVIV PTRELA+Q + L
Sbjct: 38 GRDIMGLAQTGTGKTAAFVLPLLQKLSAGPRGR-VRAVIVAPTRELAEQIHVNIGELGRQ 96
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQK--FDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
G+R+ V G + KFG A K ++++ P +L L +D +NL VE L++
Sbjct: 97 TGIRSVAVYGGV----SKFGQLKAFKAGVEIIVACPGRL--LDHLDSRDVNLGAVEMLVL 150
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR--RVQIN 222
DE+D +F+ G +L + Y NL +FSAT ++ LK RVQIN
Sbjct: 151 DEADMMFDMGFMPAIKKL-LKYLPAKRQNL---LFSATMPAEIRHLADSILKDPARVQIN 206
>gi|26327389|dbj|BAC27438.1| unnamed protein product [Mus musculus]
Length = 874
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|209447030|ref|NP_001129273.1| probable ATP-dependent RNA helicase DDX27 [Rattus norvegicus]
gi|169642292|gb|AAI60885.1| Ddx27 protein [Rattus norvegicus]
Length = 761
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 220 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 279
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 280 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 332
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 333 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 388
Query: 221 INV 223
I V
Sbjct: 389 IFV 391
>gi|28076989|ref|NP_082317.1| ATP-dependent RNA helicase DDX54 [Mus musculus]
gi|46576606|sp|Q8K4L0.1|DDX54_MOUSE RecName: Full=ATP-dependent RNA helicase DDX54; AltName: Full=DEAD
box protein 54
gi|21325958|gb|AAM47540.1|AF319547_1 ATP-dependent RNA-helicase [Mus musculus]
gi|55249609|gb|AAH43699.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 874
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|357404833|ref|YP_004916757.1| ATP-dependent RNA helicase srmB [Methylomicrobium alcaliphilum 20Z]
gi|351717498|emb|CCE23163.1| ATP-dependent RNA helicase srmB [Methylomicrobium alcaliphilum 20Z]
Length = 440
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 33 FKH-FEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCP 89
F H E + L+ + ++ CA TGSGKTAAFLIP + L P++ + +I+ P
Sbjct: 31 FDHPTEVQAAVIPLANESKDLWVCAKTGSGKTAAFLIPALQHLLQNCPEDSAAKVLILAP 90
Query: 90 TRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRS---AQKFDVLITTPNKLVYL 146
TRELAKQT+ + +L+E +++ +I E F +S A+ ++I TP +L+ +
Sbjct: 91 TRELAKQTHKQCRQLAEFTPIKSGMI----IGGEDFKKQSALFAKSTAIIIATPGRLIEV 146
Query: 147 LQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
++ + + + ++ LI+DE+D++ + GF++ L I + C P + +FSAT
Sbjct: 147 IE--EGSADFSRLDLLILDEADRMLDM---GFKNDLLKIASVCK-PERQTLLFSAT 196
>gi|85816749|gb|EAQ37935.1| DEAD/DEAH box helicase [Dokdonia donghaensis MED134]
Length = 425
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 14/168 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---FRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +P++H+L G RA+++ PTRELA Q Y+ S
Sbjct: 38 GKDVLASAQTGTGKTAGFTLPMLHNLIANPRQGRRKVRALVLTPTRELAAQIYDNVREYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + +++ VI G + Q + R Q D+L+ TP +L+ L + L+L+++E+L++
Sbjct: 98 KYVDIKSTVIFGGVNQNPQVRTIR--QGVDILVATPGRLLDL--ENQGLLSLSDIEFLVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
DE+D++ + G + + L ++ A NL +FSAT +D+ K
Sbjct: 154 DEADRMLDMGFIHDIKKVLRLVPAKRQ--NL---LFSATFNKDIKKLA 196
>gi|332293596|ref|YP_004432205.1| DEAD/DEAH box helicase domain protein [Krokinobacter sp. 4H-3-7-5]
gi|332171682|gb|AEE20937.1| DEAD/DEAH box helicase domain protein [Krokinobacter sp. 4H-3-7-5]
Length = 427
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 14/168 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKN--LGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +P+IH L PK RA+++ PTRELA Q + S
Sbjct: 38 GKDVLASAQTGTGKTAGFTLPMIHRLINNPKQGRRKIRALVLTPTRELAAQIQENVLEYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + +++ VI G + Q + R Q D+L+ TP +L+ L + L+L++VE+L++
Sbjct: 98 KYVDIKSMVIFGGVNQNPQVRTLR--QGVDILVATPGRLLDL--QNQGLLSLSDVEFLVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWC 211
DE+D++ + G + + L ++ A NL +FSAT D+ K+
Sbjct: 154 DEADRMLDMGFIHDIKKVLKMVPAKRQ--NL---LFSATFNTDIKKFA 196
>gi|302409340|ref|XP_003002504.1| ATP-dependent RNA helicase DBP3 [Verticillium albo-atrum VaMs.102]
gi|261358537|gb|EEY20965.1| ATP-dependent RNA helicase DBP3 [Verticillium albo-atrum VaMs.102]
Length = 571
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR A TGSGKT AF +P++ S+ K +AV+V PTRELA QT+ +T +L+ L
Sbjct: 213 GRDAIGVAETGSGKTMAFALPLVESISKMKKRCIKAVVVSPTRELAMQTHEQTAQLAAHL 272
Query: 109 GLRAHVI--GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
GL++ + G + R A D+++ TP +L M ++L++ + ++DE
Sbjct: 273 GLKSVCVYGGASKDEQRALLQRGA---DIIVATPGRLKDF--MSDGTVDLSHSRFAVLDE 327
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D++ + +GF D + I A ++ MF+AT
Sbjct: 328 ADRMLD---KGFEDDIKAILGAMPAREDRQTLMFTAT 361
>gi|426241599|ref|XP_004014677.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Ovis aries]
Length = 765
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INVG 224
I V
Sbjct: 392 IFVN 395
>gi|122692565|ref|NP_001073740.1| probable ATP-dependent RNA helicase DDX27 [Bos taurus]
gi|142980808|sp|A1A4H6.1|DDX27_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|119223998|gb|AAI26498.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Bos taurus]
gi|296481114|tpg|DAA23229.1| TPA: probable ATP-dependent RNA helicase DDX27 [Bos taurus]
Length = 765
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INVG 224
I V
Sbjct: 392 IFVN 395
>gi|89093138|ref|ZP_01166088.1| ATP-dependent RNA helicase [Neptuniibacter caesariensis]
gi|89082434|gb|EAR61656.1| ATP-dependent RNA helicase [Neptuniibacter caesariensis]
Length = 417
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 97/179 (54%), Gaps = 10/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPI---IHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G + A A TGSGKTA F++P+ +HS+ P N A+++ PTRELA Q R S
Sbjct: 38 GHDLIAAAETGSGKTAGFVLPLLEKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYS 97
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
E + + AA +S K D+++ TP +L+ L++ + AL+L ++ L++
Sbjct: 98 ENCPRKIRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKN--ALDLRGLKALVL 155
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + GF D+L I G N++ +FSAT + V + L+ V+I+V
Sbjct: 156 DEADRMLDL---GFADELDDILDQTPG-NVQTLLFSATFPDKVKELTEELLRNPVEISV 210
>gi|449702259|gb|EMD42932.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
Length = 555
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHS-LRGP-----KNLGFR------AVIVCPTRELAKQT 97
R + +CA TGSGKTAAFL PII L+ P N R A+I+ PTREL +Q
Sbjct: 153 RDLMSCAQTGSGKTAAFLFPIISDILKNPPMPRQSNFSHRVTVFPVALILAPTRELGQQI 212
Query: 98 YNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
Y E VR +E +R+ + + + + D+L+ TP +L+Y + ++L+
Sbjct: 213 YEEAVRFTEDTPIRSVCVYGGSDSYTQIQ-EMGKGCDILVATPGRLLYFTEKK--IVSLS 269
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKWCRRK 214
+V +LI DE+D++ + GF Q+ I P + + MFSAT + + +
Sbjct: 270 SVRYLIFDEADRMLDM---GFEPQIREICEDNEMPPVGKRQTLMFSATFPKQIQRLAADF 326
Query: 215 LKRRVQINVG 224
L V I VG
Sbjct: 327 LDDYVFITVG 336
>gi|378731790|gb|EHY58249.1| ATP-dependent RNA helicase [Exophiala dermatitidis NIH/UT8656]
Length = 524
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 20/207 (9%)
Query: 30 NSIFKHFEPHFTITYLS-PL---GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRA 84
+S+F FE +I + P GR + A TGSGKT AF +P+I L G K G RA
Sbjct: 116 SSVFSSFEKPSSIQSAAWPFLLSGRDVVGVAETGSGKTIAFGMPLIFRLSGLKKKKGIRA 175
Query: 85 VIVCPTRELAKQTYNETVRL-----SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLIT 138
V+V PTRELA Q + + +L S G L+ I G + ++ RS Q ++++
Sbjct: 176 VVVAPTRELAIQVFEQIDKLCKTATSAGQKLKPVCIYGGTNKDEQR---RSLQGANIVVA 232
Query: 139 TPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLA-VIYAACSGPNLKRG 197
TP +L M ++++ +L++DE+D++ + +GF D + +I S +
Sbjct: 233 TPGRLKDF--MSDGTIDVSKTRYLVLDEADRMLD---KGFEDDIKHIISQMPSSSKRQTA 287
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT + + +K V+I +G
Sbjct: 288 MFTATWPKSIRDLAATFMKEPVKITIG 314
>gi|300796770|ref|NP_001178477.1| ATP-dependent RNA helicase DDX54 [Rattus norvegicus]
Length = 874
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|414876217|tpg|DAA53348.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 294
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 35/191 (18%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGFRAVIVCPTRELAKQTYN------ 99
+ + A TGSGKT AF++P++ LR PK+ A+I+ PTREL+ Q +N
Sbjct: 58 KDVAVDAATGSGKTLAFIVPVVEILRRRSSPPKSHEVLALIISPTRELSSQIFNVAQPFF 117
Query: 100 ------ETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPA 153
++ L GL ++A + K+++ + ++L+ TP KL ++ D A
Sbjct: 118 ATLNGVSSMLLVGGLDIKAE-LKKVEE----------EGANILVGTPGKLFDIMHTD--A 164
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCR 212
L N+E LI+DE+D+L + GF+ + I + P L+R G+FSAT T+ VA +
Sbjct: 165 LEYKNLEILILDEADRLLDM---GFQKHINFILSML--PKLRRTGLFSATQTKAVADLSK 219
Query: 213 RKLKRRVQINV 223
L+ +++ V
Sbjct: 220 AGLRNPIRVEV 230
>gi|345562876|gb|EGX45884.1| hypothetical protein AOL_s00112g73 [Arthrobotrys oligospora ATCC
24927]
Length = 699
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 19/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
G+ + A TGSGKT AF P + L R PK G R VIV PTRELA Q + +
Sbjct: 310 GKDLIGVAETGSGKTMAFAYPAVQYLCKFPKSDRNPKKSGARVVIVSPTRELAMQIFEQV 369
Query: 102 VRLSEGLGLRAH---VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
+L+ GL+ + G + + ++ S +K V++ TP +L L+ A N++
Sbjct: 370 EKLTIAAGLKDAATCIYGGVPKDPQR---ESLKKALVIVATPGRLNDFLEEG--AANISQ 424
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAAC-SGPNLKRGMFSATHTEDVAKWCRRKLKR 217
E++++DE+D++ + +GF D + +I A + P + MF+AT + V + + +
Sbjct: 425 AEYVVLDEADRMLD---KGFEDAIKMILGATPATPKRQTLMFTATWPQSVRQLASTFMTK 481
Query: 218 RVQINV 223
V+I +
Sbjct: 482 PVRIGI 487
>gi|396463068|ref|XP_003836145.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
gi|312212697|emb|CBX92780.1| similar to ATP-dependent RNA helicase dbp10 [Leptosphaeria maculans
JN3]
Length = 894
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 95/170 (55%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF+IP+I L+ +G R +I+ P+RELA QT L G
Sbjct: 115 GDDVVGMARTGSGKTAAFVIPMIQKLKAHSAKVGARGIIMSPSRELALQTLKVVKELGRG 174
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR ++ E+F + D++I TP + ++L ++M L+L++V++++ DE
Sbjct: 175 TDLRTILLVGGDSLEEQFSSMTTNP-DIIIATPGRFLHLKVEM---GLDLSSVKYIVFDE 230
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF QL+ I A N + +FSAT + + ++ R L+
Sbjct: 231 ADRLFEM---GFAAQLSEILHALP-TNRQTLLFSATLPKSLVEFARAGLQ 276
>gi|384252494|gb|EIE25970.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 806
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 9/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A TGSGKTAAF+IP++ LR P+ G RA+I+ PTREL Q + LS
Sbjct: 81 GQDVVGMARTGSGKTAAFVIPMLERLREHSPR-AGARALILAPTRELTLQLHKVVKELSR 139
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR V+ +F +A D+L+ TP +L++ LQ + ++L V++ + DE
Sbjct: 140 YTDLRTAVLVGGDSMEAQFAELAANP-DILLATPGRLMHHLQ-EVEGMSLQTVQYCVFDE 197
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF +QL + + G + +FSAT +A++ R LK
Sbjct: 198 ADQLFEM---GFAEQLRAVLSKM-GDARQTLLFSATLPAALAEFARAGLK 243
>gi|328869268|gb|EGG17646.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 860
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 106/179 (59%), Gaps = 12/179 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ I A A TGSGKTAAF++PI+ L R + R +IV PTRELA Q ++ L++
Sbjct: 271 GKDILASATTGSGKTAAFILPILERLLYRDATHRVSRVLIVLPTRELALQCHSVFESLAQ 330
Query: 107 GLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+++ V+G + ++ R ++ DV+I TP +L+ L ++ + L ++E L++D
Sbjct: 331 FTNVQSCLVVGGLSNKVQEHELR--KRPDVIIATPGRLIDHL-LNAHDVGLEDIEILVLD 387
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
E+D+L + GF+D+L + +C P+ ++ +FSAT ++DV + L + V++ V
Sbjct: 388 EADRLLDM---GFKDELNRVVESC--PDGRQTLLFSATLSDDVKLLAKLSLSQPVRVAV 441
>gi|225562366|gb|EEH10645.1| ATP-dependent RNA helicase DED1 [Ajellomyces capsulatus G186AR]
Length = 694
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 23/193 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS---LRGPKNLGFR-----------AVIVCPTRELA 94
GR + ACA TGSGKT FL PI+ RGP+ R A+I+ PTREL
Sbjct: 240 GRDLMACAQTGSGKTGGFLFPILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELV 299
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y+E + L V+ + + + Q +VL+ TP +LV +++ +
Sbjct: 300 SQIYDEARKFCYRTALHPRVVYGGAEMGNQLR-QLDQGCNVLVATPGRLVDMMERG--RI 356
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRGMFSATHTEDVAKWC 211
+LA++++L++DE+D++ + GF Q+ I P+ + MFSAT D+ K
Sbjct: 357 SLAHIQYLVLDEADRMLDM---GFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLA 413
Query: 212 RRKLKRRVQINVG 224
LK + ++VG
Sbjct: 414 EEFLKDHIFLSVG 426
>gi|213408863|ref|XP_002175202.1| ATP-dependent RNA helicase dbp3 [Schizosaccharomyces japonicus
yFS275]
gi|212003249|gb|EEB08909.1| ATP-dependent RNA helicase dbp3 [Schizosaccharomyces japonicus
yFS275]
Length = 554
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 10/181 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A TGSGKT AF IP ++ L K+ R ++V PTRELA QTY L
Sbjct: 177 GRDVVGIAETGSGKTVAFGIPALRYLNQLPKEKHPSIRVLVVSPTRELAIQTYENMRDLL 236
Query: 106 EGLGLRAHVIGKIQQAAEKF-GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
LGL + + A KF R+A++ V+I TP +L+ L+ + A+N + V +L++
Sbjct: 237 APLGLN---VVAVYGGAPKFEQARAAREASVIIGTPGRLLDLI--NDGAVNCSKVGYLVL 291
Query: 165 DESDKLFEAGV-RGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + G + R+ ++ +G + FSAT E V + LK V+I +
Sbjct: 292 DEADRMLDTGFEQDIRNIMSATPNPLAGGQRQTVFFSATWPESVRELASTFLKDPVKITI 351
Query: 224 G 224
G
Sbjct: 352 G 352
>gi|452982809|gb|EME82567.1| hypothetical protein MYCFIDRAFT_163928 [Pseudocercospora fijiensis
CIRAD86]
Length = 481
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP ++HSLR P+N G ++V PTRELA Q + L
Sbjct: 44 GRDVLGAAKTGSGKTLAFLIPAVEMLHSLRFKPRN-GTGVIVVSPTRELALQIFGVAREL 102
Query: 105 ----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ G+ VIG + AE + ++ ++LI TP +L+ LQ + NV+
Sbjct: 103 MEHHSQTFGI---VIGGANRRAE--AEKLSKGVNLLIATPGRLLDHLQ-NTQGFVFKNVK 156
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
L++DE+D++ E GF D++ I + + +FSAT T V R L+
Sbjct: 157 ALVIDEADRILEV---GFEDEMRQIVKILPKEDRQTMLFSATQTTKVEDLARISLR 209
>gi|383849107|ref|XP_003700188.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Megachile
rotundata]
Length = 770
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTA FLIP+ L+ + +G RA+I+ PTRELA QT L
Sbjct: 73 GRDVVAMARTGSGKTACFLIPLFEKLKARQTKIGARALILSPTRELALQTLKFIKELGRF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+A VI +F D+L+ TP + +++ ++MD L L ++E+++ DE
Sbjct: 133 TGLQAAVILGGDNMENQFSTIHGNP-DILVATPGRFLHICIEMD---LQLNSIEYVVFDE 188
Query: 167 SDKLFEAG 174
+D+LFE G
Sbjct: 189 ADRLFEMG 196
>gi|354480665|ref|XP_003502525.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Cricetulus
griseus]
Length = 788
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 247 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 306
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 307 QFCSVTTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 359
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 360 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 415
Query: 221 INV 223
I V
Sbjct: 416 IFV 418
>gi|395834008|ref|XP_003790009.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Otolemur garnettii]
Length = 859
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 84/141 (59%), Gaps = 9/141 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 117 GKDVVAMARTGSGKTACFLLPMFERLKTRSAQTGARALILSPTRELALQTMKFTKELGKF 176
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 177 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 232
Query: 167 SDKLFEAGVRGFRDQLAVIYA 187
+D+LFE GF +QL I A
Sbjct: 233 ADRLFEM---GFAEQLQEIIA 250
>gi|88801632|ref|ZP_01117160.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
gi|88782290|gb|EAR13467.1| putative ATP-dependent RNA helicase [Polaribacter irgensii 23-P]
Length = 432
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 14/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ I A A TG+GKTA F +P++ L + PK RA+++ PTRELA Q ++ S
Sbjct: 38 GKDILASAQTGTGKTAGFTLPVLQYLVETKHPKYRPLRALVLTPTRELAAQVHDNVREYS 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + +++ V+ G + + RS D+L+ TP +L+ L D AL+ VE LI+
Sbjct: 98 KYVDIKSTVVFGGVNAKPQIATLRSG--VDILVATPGRLLDL--HDQKALSFKRVEVLIL 153
Query: 165 DESDKLFEAGVRGFRDQLAVI-YAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + G RD +I + NL MFSAT + D+ K L+ V +
Sbjct: 154 DEADRMLDMGF--VRDINKIISFMPAKRQNL---MFSATFSNDIKKLASGILRDPVSVET 208
>gi|318041670|ref|ZP_07973626.1| putative ATP-dependent RNA helicase [Synechococcus sp. CB0101]
Length = 407
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 96/180 (53%), Gaps = 14/180 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GP--KNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A A TG+GKTA F +P++ LR GP +N RA+++ PTRELA Q S
Sbjct: 23 GRDVMAAAQTGTGKTAGFTLPMLERLRHGPHARNNVVRALVLTPTRELAAQVGENVAAYS 82
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR+ V+ G ++ + R DVL+ TP +L+ L Q + A+ L VE L++
Sbjct: 83 RHLDLRSDVVFGGVKINPQMMRLRGG--ADVLVATPGRLMDLAQQN--AVKLNRVEILVL 138
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + G +R + LA++ A NL +FSAT + K L VQ+
Sbjct: 139 DEADRMLDMGFIRDIQKILALLPAKRQ--NL---LFSATFEASIKKLATGLLHNPVQLQA 193
>gi|194224511|ref|XP_001501169.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Equus
caballus]
Length = 724
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 272 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 331
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 332 QFCSITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 384
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 385 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 440
Query: 221 INVG 224
I V
Sbjct: 441 IFVN 444
>gi|398986786|ref|ZP_10691704.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
gi|399011731|ref|ZP_10714061.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398117315|gb|EJM07067.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM16]
gi|398151662|gb|EJM40204.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM24]
Length = 445
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 94/165 (56%), Gaps = 15/165 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ GPK RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQLLAMEGPKVAANSVRALILVPTRELAEQVHEAVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L LR + V G + + R D+L+ TP +L+ L + AL ++ L+
Sbjct: 98 AENLPLRTYAVYGGVSINPQMMKLRGG--VDLLVATPGRLLDLFRQK--ALKFNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
+DE+D++ + GF ++L+ IY A P ++ +FSAT ++D+
Sbjct: 154 LDEADRMLDL---GFSEELSNIYRAL--PKKRQTLLFSATFSDDI 193
>gi|167518760|ref|XP_001743720.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777682|gb|EDQ91298.1| predicted protein [Monosiga brevicollis MX1]
Length = 787
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 12/171 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFLIP+ L+ +G RA+++ PTRELA QT+ L
Sbjct: 39 GQDVVAMARTGSGKTAAFLIPLFERLKNHSARVGIRALVLSPTRELALQTFKFVKELGRF 98
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
LR+ +I +FG D+++ TP + ++L+ +M+ L+L E+++ DE
Sbjct: 99 SDLRSILILGGDSMDSQFGDMHTNP-DIVVATPGRFLHLIVEME---LSLVTTEYVVFDE 154
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLK 216
+D+LFE GF +QL I A P+ ++ +FSAT + + + R LK
Sbjct: 155 ADRLFEM---GFAEQLREIMARL--PDTRQTTLFSATLPKVLVDFARAGLK 200
>gi|330804668|ref|XP_003290314.1| hypothetical protein DICPUDRAFT_95112 [Dictyostelium purpureum]
gi|325079564|gb|EGC33158.1| hypothetical protein DICPUDRAFT_95112 [Dictyostelium purpureum]
Length = 706
Score = 82.8 bits (203), Expect = 9e-14, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 99/195 (50%), Gaps = 27/195 (13%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHS--LRG------------PKNLGFRAVIVCPTRELAK 95
R + ACA TGSGKTAAFL+PII L G P+ RA+++ PTRELA+
Sbjct: 270 RDLMACAQTGSGKTAAFLLPIISGILLDGAPEPPASYKPGVPRAAAPRALVLAPTRELAQ 329
Query: 96 QTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPA 153
Q YNE + S G +++ V I AE F + + D+L+ T +LV LL
Sbjct: 330 QIYNEANKFSYGSPIQSVV---IYGGAEVFNQINELDKGVDILVATTGRLVDLLLRG--R 384
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP---NLKRGMFSATHTEDVAKW 210
+ L+ +++L++DE+D++ + GF Q+ I P + + MFSAT + +
Sbjct: 385 VTLSKIKYLVLDEADRMLDM---GFEPQIRQIIGDFDMPGSRDRQTLMFSATFPKQIQAL 441
Query: 211 CRRKLKRRVQINVGL 225
L + + VG+
Sbjct: 442 ASDFLSNYIFLKVGV 456
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 251 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVICAPTRELAHQIYLEAKKF 310
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L+ A V G + + ++F A ++++ TP +L+ LL+M AL + +L+
Sbjct: 311 AKPYNLQVAAVYGGVSK-FDQFKELKA-GCEIVVATPGRLIDLLKMK--ALKMFRATYLV 366
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 367 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILSDPIRVTV 422
Query: 224 G 224
G
Sbjct: 423 G 423
>gi|148687811|gb|EDL19758.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Mus musculus]
Length = 855
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 134 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 193
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 194 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 249
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 250 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 281
>gi|260798638|ref|XP_002594307.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
gi|229279540|gb|EEN50318.1| hypothetical protein BRAFLDRAFT_275600 [Branchiostoma floridae]
Length = 563
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 31/194 (15%)
Query: 28 VSNSIFKHFEPHFTITY-LSPLGRQIFACAPTGSGKTAAFLIPIIHS-LRGPKNLGF-RA 84
+S F H P T ++ LG+ + ACA TG+GKTAAF++P++ L P+ R
Sbjct: 11 ISQMKFHHPTPIQKATIPVALLGKDVCACAATGTGKTAAFMLPVLERLLYKPRQAPVTRV 70
Query: 85 VIVCPTRELAKQTYNETVRLSE-----------GLGLRAHVIGKIQQAAEKFGPRSAQKF 133
+++ PTRELA Q + + +L++ GL +R Q+AA + GP
Sbjct: 71 LVLAPTRELAVQVHQVSRQLAQFTSVEISLAAGGLDIRT------QEAALRLGP------ 118
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
DV+I TP +L+ L + P+ +L ++E LI+DE+D++ + F +Q+ I C+
Sbjct: 119 DVVIATPGRLIDHLH-NTPSFDLKSIEVLILDEADRMLDE---FFEEQMNEIIRLCARKR 174
Query: 194 LKRGMFSATHTEDV 207
+ +FSAT ++ V
Sbjct: 175 -QTMLFSATMSDQV 187
>gi|26327531|dbj|BAC27509.1| unnamed protein product [Mus musculus]
Length = 909
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|281351106|gb|EFB26690.1| hypothetical protein PANDA_000812 [Ailuropoda melanoleuca]
Length = 703
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 191 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 250
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 251 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 303
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 304 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 359
Query: 221 INVG 224
I V
Sbjct: 360 IFVN 363
>gi|167526114|ref|XP_001747391.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774226|gb|EDQ87858.1| predicted protein [Monosiga brevicollis MX1]
Length = 504
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 100/185 (54%), Gaps = 23/185 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELA---KQTYNETV 102
G+ + A TGSGKTAAF +P++H L +G K F A+++ PTRELA +QT+N
Sbjct: 118 GKDVIGLAETGSGKTAAFALPVLHDLLATKGKKE--FFALVLAPTRELAFQIRQTFNA-- 173
Query: 103 RLSEGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L +GL++ V +G I + A+K VLI TP +LV L+ + +L + +
Sbjct: 174 -LGSPIGLKSAVLVGGIDMTTQAIA--LAKKPHVLIATPGRLVDHLE-NTKGFHLKALRY 229
Query: 162 LIVDESDKLFEAGVRGFRDQ-LAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
LI+DE+D++ D+ LAVI P +R +FSAT T V K R L+ V
Sbjct: 230 LIMDEADRMLNMDYEKELDKILAVI------PRERRTFLFSATMTSKVGKLQRASLRDPV 283
Query: 220 QINVG 224
++ V
Sbjct: 284 KVEVN 288
>gi|375011473|ref|YP_004988461.1| DNA/RNA helicase [Owenweeksia hongkongensis DSM 17368]
gi|359347397|gb|AEV31816.1| DNA/RNA helicase, superfamily II [Owenweeksia hongkongensis DSM
17368]
Length = 419
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G I CA TG+GKTAAF++PI+H + K G ++IVCPTRELA Q + L+
Sbjct: 38 GSDIIGCAQTGTGKTAAFILPILHKIATSKTKGTNSLIVCPTRELAMQIDQQVQGLAYFT 97
Query: 109 GLRAHVI--GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+ I G + E+ D++I TP +L L M+ + +N++ LI+DE
Sbjct: 98 NTSSFAIYGGGDGISWEQERRALTDGVDIIIATPGRL--LSHMNNGYADFSNIQHLILDE 155
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGL 225
+D++ + GF D + I P K+ MFSAT + K + L ++N+ +
Sbjct: 156 ADRMLDI---GFHDDIIKIIKEL--PAKKQSLMFSATMAPKIRKLAKEILHSPKEVNLAV 210
>gi|229592757|ref|YP_002874876.1| putative ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
gi|229364623|emb|CAY52530.1| putative ATP-dependent RNA helicase [Pseudomonas fluorescens SBW25]
Length = 444
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG--FRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ L GPK RA+I+CPTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFAVPLLQLLTTEGPKVAANSARALILCPTRELAEQVHASVAEY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L L + V G + + R D+L+ TP +L+ L + + AL L ++ L+
Sbjct: 98 AQHLPLTTYAVYGGVSINPQMMKLRKG--VDILVATPGRLIDLFRQN--ALKLNQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++LA IY P ++ +FSAT ++++ + L + I
Sbjct: 154 LDEADRMLDL---GFSEELANIYRML--PKKRQTLLFSATFSDEIRLLAGQMLNDPLTIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|303288181|ref|XP_003063379.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455211|gb|EEH52515.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 513
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL---------RGPKNLGFRAVIVCPTRELAKQTYNE 100
R + ACA TGSGKTAAF PII+ L RG + A+++ PTRELA Q + E
Sbjct: 91 RDLMACAQTGSGKTAAFCFPIIYGLLDRGLAGSQRGGRKTFPLALVIAPTRELAIQIHEE 150
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLANV 159
+ + + G+ + VI AA++F R ++ D+L+ TP +L+ L+ D ++L+ V
Sbjct: 151 SRKFAYQTGVASCVIYGGAPAAQQF--REMERGCDILVATPGRLIDLV--DRAKISLSEV 206
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP---NLKRGMFSATHTEDVAKWCRRKLK 216
+L +DE+D++ + GF Q+ I P + +FSAT ++ + LK
Sbjct: 207 RYLALDEADRMLDM---GFEPQIRQIVEQRDMPPTGERQTMLFSATFPREIQRMASDFLK 263
Query: 217 RRVQINVG 224
+ + VG
Sbjct: 264 DYIFLTVG 271
>gi|399519771|ref|ZP_10760562.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
pseudoalcaligenes CECT 5344]
gi|399112168|emb|CCH37121.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
pseudoalcaligenes CECT 5344]
Length = 441
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 17/160 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN----LGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TGSGKTAAF++P+++ L G N L RA+I+ PTRELA+QT E R
Sbjct: 37 GKDLRVIAQTGSGKTAAFVLPLLNRLLGDGNSKQRLSIRALILLPTRELAQQTLKEVERF 96
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ L+A ++ E F ++A +K D+LI TP +L+ + L L VE L
Sbjct: 97 AQFTFLKAGLV----TGGEDFKVQAAMMRKIDILIGTPGRLIE--HANAGNLPLDEVEVL 150
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+ DE+D++ + GF + + AC GP+ + +FSAT
Sbjct: 151 VFDEADRMLDM---GFAEDAQRLAEAC-GPH-QTLLFSAT 185
>gi|363736126|ref|XP_422125.2| PREDICTED: ATP-dependent RNA helicase DDX18 [Gallus gallus]
Length = 639
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 27/206 (13%)
Query: 23 TTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-G 76
TL +S+ F H + PL GR I A A TGSGKT AFLIP +I+ L+
Sbjct: 158 NTLKGISDMGFTHM-TEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFM 216
Query: 77 PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF--- 133
P+N G +I+ PTRELA QTY L E + H G I + + AQK
Sbjct: 217 PRN-GTGVIILSPTRELAMQTYG---VLKELMNHHVHTYGLIMGGSNRSA--EAQKLGNG 270
Query: 134 -DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP 192
++++ TP +L+ +Q + P N++ L++DE+D++ E GF +++ I P
Sbjct: 271 INIIVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILEV---GFEEEMKQIIKLL--P 324
Query: 193 NLKRGM-FSATHT---EDVAKWCRRK 214
++ M FSAT T ED+AK +K
Sbjct: 325 KRRQTMLFSATQTRKVEDLAKISLKK 350
>gi|330502250|ref|YP_004379119.1| DEAD/DEAH box helicase [Pseudomonas mendocina NK-01]
gi|328916536|gb|AEB57367.1| DEAD/DEAH box helicase domain-containing protein [Pseudomonas
mendocina NK-01]
Length = 441
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 17/160 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN----LGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TGSGKTAAF++P+++ L G N L RA+I+ PTRELA+QT E R
Sbjct: 37 GKDLRVIAQTGSGKTAAFVLPLLNRLLGDGNSKQRLSIRALILLPTRELAQQTLKEVERF 96
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ L+A ++ E F ++A +K D+LI TP +L+ + L L VE L
Sbjct: 97 AQFTFLKAGLV----TGGEDFKVQAAMMRKIDILIGTPGRLIE--HANAGNLPLDEVEVL 150
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+ DE+D++ + GF + + AC GP+ + +FSAT
Sbjct: 151 VFDEADRMLDM---GFAEDAQRLAEAC-GPH-QTLLFSAT 185
>gi|170093371|ref|XP_001877907.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647766|gb|EDR12010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 441
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I APTGSGKT AF+IPI+H L P+ G+ A ++ PTRELA Q + L
Sbjct: 41 GRDIIGIAPTGSGKTLAFVIPILHRLWDNPQ--GYFACVLSPTRELAYQISAQFEALGAA 98
Query: 108 LGLRAHVI-----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+G+++ VI ++QQA R AQK +++ TP +L L+ +L +++ L
Sbjct: 99 MGVQSVVIVGGDDDRVQQAV-----RLAQKPHIIVATPGRLHDHLK-STKGFSLRSLKHL 152
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D+L + F+ ++ I + +FSAT T +V+K R L V+++
Sbjct: 153 VLDEADRLLDL---DFQREITEIMQSIPKERCTY-LFSATMTANVSKLQRASLSDPVRVD 208
Query: 223 VGL 225
L
Sbjct: 209 ASL 211
>gi|268566495|ref|XP_002639737.1| Hypothetical protein CBG12465 [Caenorhabditis briggsae]
Length = 542
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 19/188 (10%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRGPKNLGFRAVIVCPTRELAKQTYN 99
+ PL G+ + A A TGSGKT AFL+P ++H L ++ G +IV PTREL+ QTY
Sbjct: 98 IDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYG 157
Query: 100 ETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L EG L V+G ++AEK + A+ +L+ TP +L+ LQ D + N
Sbjct: 158 VLTELLEGSNLTFGLVMGGSNRSAEK--DKLAKGVSILVATPGRLLDHLQND--NFLVRN 213
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ LI+DE+D++ + GF ++ + P ++ M FSATH+ V + + L
Sbjct: 214 LKCLIIDEADRILDI---GFEIEMQQVLRHL--PKQRQSMLFSATHSPKVDELVKLALHS 268
Query: 218 ---RVQIN 222
RV +N
Sbjct: 269 NPVRVSVN 276
>gi|239611619|gb|EEQ88606.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis ER-3]
gi|327348365|gb|EGE77222.1| ATP-dependent RNA helicase DED1 [Ajellomyces dermatitidis ATCC
18188]
Length = 692
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSL--RGPKNLGFR-----------AVIVCPTRELA 94
GR + ACA TGSGKT FL PI+ SL RGP+ R A+I+ PTREL
Sbjct: 236 GRDLMACAQTGSGKTGGFLFPILSQSLHRRGPEAEATRGLGRQQKAYPTALILGPTRELV 295
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y+E + L V+ + + + Q +VL+ TP +LV +++ +
Sbjct: 296 SQIYDEARKFCYRTALHPRVVYGGAEMGNQLR-QLDQGCNVLVATPGRLVDMMERG--RI 352
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRGMFSATHTEDVAKWC 211
+LA++++L++DE+D++ + GF Q+ I P+ + MFSAT D+ K
Sbjct: 353 SLAHIQYLVLDEADRMLDM---GFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLA 409
Query: 212 RRKLKRRVQINVG 224
LK + ++VG
Sbjct: 410 EEFLKDHIFLSVG 422
>gi|256087842|ref|XP_002580072.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646373|emb|CCD58966.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 454
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ I A TGSGKTAAF IPI+ L F A+I+ PTRELA Q + L + G
Sbjct: 42 KDIVGLAETGSGKTAAFAIPILQDLLSKPRHNF-ALILTPTRELALQVKCLFMELGDKFG 100
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+ + Q ++ KF V++ TP ++VY L+ + L L +V + ++DE+D+
Sbjct: 101 LKVVCLVGGQHVEDQVRDLKRLKFHVIVGTPGRVVYHLE-NTKELRLNHVRYFVLDEADQ 159
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK 209
+ E F QLA I PN + ++SAT T++V K
Sbjct: 160 MLED---TFEQQLAFIITKLH-PNKQTFLYSATMTQNVDK 195
>gi|342319919|gb|EGU11864.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhodotorula
glutinis ATCC 204091]
Length = 1534
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 97/193 (50%), Gaps = 30/193 (15%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKT AF++P+ ++ L G A+I+ PTRELA Q Y E
Sbjct: 611 GRDIIGVAKTGSGKTMAFILPMFRHIKDQPPLRPLDGPIAIIMTPTRELATQIYKECKPF 670
Query: 105 SEGLGLRAHV----------IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
+ LGLRA I +++ +E V++ TP +++ LL + L
Sbjct: 671 LKALGLRASCAYGGMPLKDNIADMKRGSE-----------VIVCTPGRMIELLTTNSGRL 719
Query: 155 -NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
NL V +L++DE+D++F+ GF Q+ I P+ + +FSAT + R+
Sbjct: 720 INLQRVTYLVLDEADRMFDM---GFEPQVMKIIGQIR-PDRQTVLFSATFPRQMEALARK 775
Query: 214 KLKRRVQINVGLR 226
L+R ++I VG R
Sbjct: 776 VLRRPLEITVGGR 788
>gi|414876218|tpg|DAA53349.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein,
partial [Zea mays]
Length = 295
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 35/185 (18%)
Query: 56 APTGSGKTAAFLIPIIHSLR----GPKNLGFRAVIVCPTRELAKQTYN------------ 99
A TGSGKT AF++P++ LR PK+ A+I+ PTREL+ Q +N
Sbjct: 64 AATGSGKTLAFIVPVVEILRRRSSPPKSHEVLALIISPTRELSSQIFNVAQPFFATLNGV 123
Query: 100 ETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ L GL ++A + ++ A ++L+ TP KL ++ D AL N+
Sbjct: 124 SSMLLVGGLDIKAELKKVEEEGA-----------NILVGTPGKLFDIMHTD--ALEYKNL 170
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLKRR 218
E LI+DE+D+L + GF+ + I + P L+R G+FSAT T+ VA + L+
Sbjct: 171 EILILDEADRLLDM---GFQKHINFILSML--PKLRRTGLFSATQTKAVADLSKAGLRNP 225
Query: 219 VQINV 223
+++ V
Sbjct: 226 IRVEV 230
>gi|423096700|ref|ZP_17084496.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
gi|397887096|gb|EJL03579.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q2-87]
Length = 448
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C+ N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFSEDVQRLVDECT--NRQQTMLFSAT 185
>gi|343428869|emb|CBQ72414.1| probable DEAD box protein (putative RNA helicase) [Sporisorium
reilianum SRZ2]
Length = 568
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 114/230 (49%), Gaps = 15/230 (6%)
Query: 2 KNILTIALGIFTIGFV-ISIIVTTLAVVSNSIFKHFEPHFTITYLSPL-GRQIFACAPTG 59
K + TIA + F + +I + +N FKH P L R + A TG
Sbjct: 109 KKVATIAEDGKKVSFQDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTG 168
Query: 60 SGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGK 117
SGKTAAF IPI+ +L PK F A ++ PTRELA Q + L +G+R A ++G
Sbjct: 169 SGKTAAFTIPILQALWDNPKP--FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGG 226
Query: 118 IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRG 177
+ ++ +++ V++ TP +L L+ + +L +++L++DE+D+L +
Sbjct: 227 MDMMSQSIA--LSKRPHVIVATPGRLQDHLE-NTKGFSLRGLQYLVMDEADRLLDMDFGP 283
Query: 178 FRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINVGLR 226
D+L S P +R M FSAT T VAK R LK V++ V +
Sbjct: 284 IIDKL-----LQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTK 328
>gi|448098288|ref|XP_004198888.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
gi|359380310|emb|CCE82551.1| Piso0_002281 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKTAAF++P+I L+ LG RA+I+ P+RELA QT+ + S G
Sbjct: 164 NRDVVGMARTGSGKTAAFVLPLIEKLKSHSPVLGARALILSPSRELALQTFRQVKEFSRG 223
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR V+ + F D+++ TP + ++L ++M L+L+ +E+++ DE
Sbjct: 224 TDLRTVVLVGGDSLEDHFSSL-MNNPDIVVATPGRFLHLKVEM---QLDLSTMEYVVFDE 279
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL + AA P ++ +FSAT
Sbjct: 280 ADRLFEM---GFAEQLNELLAAL--PAARQTLLFSAT 311
>gi|400596455|gb|EJP64229.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 895
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 9/142 (6%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I LR G RA+I+ P+RELA QT LS+G
Sbjct: 123 KDVVGMARTGSGKTAAFVIPMIERLRAHSAKFGSRALIMSPSRELAIQTLKVVKELSKGT 182
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+A ++ E+FG +A D++I TP + ++L ++M L+++++++++ DE+
Sbjct: 183 DLKAVLLVGGDSLEEQFGFMAANP-DIVIATPGRFLHLKVEM---KLDISSIKYVVFDEA 238
Query: 168 DKLFEAGVRGFRDQLAVIYAAC 189
D+LFE GF QL I A
Sbjct: 239 DRLFEM---GFAAQLTEILHAL 257
>gi|219122480|ref|XP_002181572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406848|gb|EEC46786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 467
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 100/182 (54%), Gaps = 11/182 (6%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
L+ GR I A A TGSGKTAAFL+PI+ L + +A+I+ PTRELA Q
Sbjct: 32 LALAGRDICASAVTGSGKTAAFLLPILERLLHRYSGRTKAIILTPTRELAAQCLGMLTSF 91
Query: 105 SEGLGLRAHVI--GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ LRA +I G A+ RS + DV++ TP +L+ + + + L ++E L
Sbjct: 92 AQFTNLRASLIVGGAKNVNAQAAELRS--RPDVIVATPGRLLDHI-TNSAGVTLEDIEIL 148
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQI 221
++DE+D+L + GF+D++ + AC P ++ +FSAT V + +KR V++
Sbjct: 149 VLDEADRLLDL---GFQDEVHELVKAC--PVQRQTLLFSATMNTKVDDLIQLSMKRPVRV 203
Query: 222 NV 223
+
Sbjct: 204 RI 205
>gi|440636791|gb|ELR06710.1| hypothetical protein GMDG_00327 [Geomyces destructans 20631-21]
Length = 787
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 20/184 (10%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ + A TGSGKTAAF++P++ L R K R I+ PTRELA Q + +L+
Sbjct: 299 LGKDVVGGAVTGSGKTAAFIVPVLERLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLA 358
Query: 106 EGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
++ +G KIQ+A + P D++I TP + + ++ + P+ + +E
Sbjct: 359 SYTDIKFCLAVGGLSLKIQEAELRLRP------DIIIATPGRFIDHMR-NSPSFTVDTLE 411
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ E GF D+L I P ++ M FSAT T V K R L R V
Sbjct: 412 ILVLDEADRMLE---DGFADELNEILTTI--PKSRQTMLFSATMTSSVDKLIRVGLNRPV 466
Query: 220 QINV 223
++ V
Sbjct: 467 RLMV 470
>gi|255726050|ref|XP_002547951.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
gi|240133875|gb|EER33430.1| ATP-dependent RNA helicase ded1 [Candida tropicalis MYA-3404]
Length = 665
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 29/196 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGPKNL-----GFRA-------VIVCPTRELA 94
GR + ACA TGSGKT FL P++ L GP + F + +++ PTREL
Sbjct: 223 GRDLMACAQTGSGKTGGFLFPVLSESYLNGPAPVPETTGAFSSHKVYPTILVMAPTRELV 282
Query: 95 KQTYNETVRLSEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
Q Y E+ + S +R V+ I Q + D+L+ TP +L LL+
Sbjct: 283 SQIYEESKKFSYRSWVRPCVVYGGADIGQQMRNLD----RGCDLLVATPGRLKDLLERG- 337
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL---KRGMFSATHTEDVA 208
++LAN+++L++DE+D++ + GF Q+ I C P + + MFSAT D+
Sbjct: 338 -KVSLANIKYLVLDEADRMLDM---GFEPQIRHIVEECDMPEVTDRQTLMFSATFPRDIQ 393
Query: 209 KWCRRKLKRRVQINVG 224
R LK V ++VG
Sbjct: 394 MLARDFLKDYVFLSVG 409
>gi|116246290|ref|XP_001230399.1| Anopheles gambiae str. PEST AGAP012892-PA [Anopheles gambiae str.
PEST]
gi|116133307|gb|EAU77946.1| AGAP012892-PA [Anopheles gambiae str. PEST]
Length = 82
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Query: 81 GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAE-KFGPRSAQKFDVLITT 139
GFRA+I+CPTRELAKQT E +RL + + LR HVI + + + S + +D+L+TT
Sbjct: 4 GFRALIICPTRELAKQTQREALRLGDEMNLRTHVIHMVDDPKKCDYSFASGRSYDILVTT 63
Query: 140 PNKLVYLLQMDPPALNLA 157
PN++ YLL +PP ++L+
Sbjct: 64 PNRICYLLSHNPPKIDLS 81
>gi|350423736|ref|XP_003493575.1| PREDICTED: ATP-dependent RNA helicase DDX54-like [Bombus impatiens]
Length = 772
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A A TGSGKTA FLIP+ L+ + G RA+I+ PTRELA QT L +
Sbjct: 73 GRDIVAMARTGSGKTACFLIPLFEKLKTRQAKAGARALILSPTRELALQTLKFIKELGKF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+A VI +F D+L+ TP + +++ ++MD L L N+E+++ DE
Sbjct: 133 TDLKAAVILGGDSMENQFSAIHGNP-DILVATPGRFLHICIEMD---LQLNNIEYVVFDE 188
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +Q+ I
Sbjct: 189 ADRLFEM---GFGEQITEI 204
>gi|321464010|gb|EFX75021.1| hypothetical protein DAPPUDRAFT_306922 [Daphnia pulex]
Length = 825
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 87/155 (56%), Gaps = 11/155 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
+ + A A TGSGKTA FLIP+ L+ +G RA+I+ PTRELA QT T L + G
Sbjct: 73 KDVVAMARTGSGKTACFLIPLFERLQAHSTIGTRALIMSPTRELALQTLKFTRELGKFTG 132
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDESD 168
L+A I +F + D++I TP + +L ++M+ L L +E+++ DE+D
Sbjct: 133 LKAATILGGDSMEAQFAAMH-EIPDIIIATPGRFAHLCVEME---LKLKEIEYVVFDEAD 188
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+LFE GF +QL I P L++ +FSAT
Sbjct: 189 RLFEM---GFGEQLLEILNRL--PELRQTLLFSAT 218
>gi|297851254|ref|XP_002893508.1| hypothetical protein ARALYDRAFT_473025 [Arabidopsis lyrata subsp.
lyrata]
gi|297339350|gb|EFH69767.1| hypothetical protein ARALYDRAFT_473025 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 32/204 (15%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + + TGSGKTAAF++P++ + R P + G A+++ PTRELA Q
Sbjct: 5 PLGLEQRDVIGISQTGSGKTAAFVLPMLAYISRLPPLREENQTEGPYALVMAPTRELAHQ 64
Query: 97 TYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
ETV+ + LG +A I ++ EK + +Q +++I TP +L+ L+ LN
Sbjct: 65 IEEETVKFARYLGFKAISITG-GESIEKQALKLSQGCEIVIATPGRLIDCLERRYVVLNQ 123
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MFS 200
N +L++DE+D++ + GF Q+A + A NLK MFS
Sbjct: 124 CN--YLVLDEADRMIDM---GFEPQVAEVLDAMPSSNLKPKKEDEELEEKKIYRTTYMFS 178
Query: 201 ATHTEDVAKWCRRKLKRRVQINVG 224
AT V + R+ L+ V + +G
Sbjct: 179 ATMLHSVERLARKYLRNPVVVTIG 202
>gi|452749107|ref|ZP_21948877.1| ATP-dependent RNA helicase [Pseudomonas stutzeri NF13]
gi|452006933|gb|EMD99195.1| ATP-dependent RNA helicase [Pseudomonas stutzeri NF13]
Length = 440
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIH--SLRGPK--NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ ++ G K + RA+++ PTRELA+Q +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ L LR + V G + + R DVL+ TP +L+ L + + A+ A ++ L+
Sbjct: 98 GQNLPLRTYAVYGGVSINPQMMALRKG--IDVLVATPGRLLDLYRQN--AVGFAQLQALV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF D+L ++AA P ++ +FSAT +E + + R L+ + +
Sbjct: 154 LDEADRMLDL---GFADELDQLFAAL--PKKRQTLLFSATFSEPIRQMARELLRDPLSVE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|398914196|ref|ZP_10656834.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|398951208|ref|ZP_10673906.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|426410872|ref|YP_007030971.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
gi|398156990|gb|EJM45400.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM33]
gi|398178936|gb|EJM66566.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM49]
gi|426269089|gb|AFY21166.1| ATP-dependent RNA helicase [Pseudomonas sp. UW4]
Length = 446
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C+ N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFAEDVQRLVDECT--NRQQTMLFSAT 185
>gi|198433176|ref|XP_002130371.1| PREDICTED: similar to ATP-dependent RNA helicase [Ciona
intestinalis]
Length = 816
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 12/156 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A A TGSGKTAAFLIP+ L+G ++ G RA+++ PTRELA QT L
Sbjct: 106 KDVVAMARTGSGKTAAFLIPMFEKLQGAQSGAGARALLLSPTRELALQTLKFVKELGRFT 165
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDES 167
LR I E+F + DV I TP +L++ L++M+ L L+N+ +++ DE+
Sbjct: 166 SLRTACILGGDSMDEQFSAMH-ENPDVTIATPGRLMHVLIEME---LRLSNIHYVVFDEA 221
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LFE GF++QL + P+ ++ +FSAT
Sbjct: 222 DRLFEL---GFQEQLHEVLHRL--PDDRQTLLFSAT 252
>gi|146306338|ref|YP_001186803.1| DEAD/DEAH box helicase [Pseudomonas mendocina ymp]
gi|145574539|gb|ABP84071.1| DEAD/DEAH box helicase domain protein [Pseudomonas mendocina ymp]
Length = 441
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 17/160 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN----LGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TGSGKTAAF++P+++ L G N + RA+I+ PTRELA+QT E R
Sbjct: 37 GKDLRVIAQTGSGKTAAFVLPLLNRLLGDGNSQQRVSIRALILLPTRELAQQTLKEVERF 96
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ L+A ++ E F ++A +K D+LI TP +L+ + L L +VE L
Sbjct: 97 AQFTFLKAGLV----TGGEDFKVQAAMMRKIDILIGTPGRLIE--HANAGNLPLGDVEVL 150
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+ DE+D++ + GF + + AC GP+ + +FSAT
Sbjct: 151 VFDEADRMLDM---GFAEDAQRLAEAC-GPH-QTLLFSAT 185
>gi|432110218|gb|ELK33991.1| Putative ATP-dependent RNA helicase DDX27 [Myotis davidii]
Length = 863
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|313233521|emb|CBY09693.1| unnamed protein product [Oikopleura dioica]
Length = 800
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A A TGSGKTAAFLIPI+ L+ + G R VI+ PTRELA QT T LS+
Sbjct: 74 GKDVVAMARTGSGKTAAFLIPILERLKKREQRGPRVVILSPTRELAIQTAKFTNDLSKFC 133
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDES 167
L VI +F + Q D++I TP +L++LL +MD L V+ ++ DE+
Sbjct: 134 NLSVSVILGGDSLDNQF-TQLDQNPDIVIATPGRLLHLLVEMD---RRLNYVKMVVFDEA 189
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
D+LF+ GF +QL I P K+ +FSAT
Sbjct: 190 DQLFDL---GFTEQLNEILGRL--PESKQTLLFSAT 220
>gi|156043047|ref|XP_001588080.1| hypothetical protein SS1G_10526 [Sclerotinia sclerotiorum 1980]
gi|154694914|gb|EDN94652.1| hypothetical protein SS1G_10526 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 548
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 18/184 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF +P + + + KN G RAV+V PTRELA Q+Y + V+L
Sbjct: 216 GRDVIGVAETGSGKTMAFAVPCVRYMSSLPKNQKNKGPRAVVVSPTRELAMQSYEQIVKL 275
Query: 105 SEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ GL V G + + + R+ + D+++ TP +L L+ +L+ +++
Sbjct: 276 AKASGLECVCVYGGVPKDEQI---RALKTADIVVATPGRLNDLINQG--CADLSKARYVV 330
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRG--MFSATHTEDVAKWCRRKLKRRVQ 220
+DE+D++ + +GF +++ I P+L KR MF+AT E V + + V+
Sbjct: 331 LDEADRMLD---KGFEEEIRKIINTT--PSLGKRQTLMFTATWPESVRELASTFMTSPVK 385
Query: 221 INVG 224
I +G
Sbjct: 386 IAIG 389
>gi|119596071|gb|EAW75665.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_a [Homo
sapiens]
Length = 440
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|255582203|ref|XP_002531894.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223528461|gb|EEF30493.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 789
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 7/169 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++ L+ G RA+I+ PTR+LA QT T L
Sbjct: 64 GSDVVAMARTGSGKTAAFLIPMLERLKQHVSQGGARALILSPTRDLALQTLKFTKELGRF 123
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LRA ++ +F AQ D++I TP +L++ L + ++L VE+++ DE+
Sbjct: 124 TDLRASLLVGGDSMESQF-EELAQNPDIIIATPGRLMHHLS-EVDDMSLRTVEYVVFDEA 181
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D LF G+ GF +QL I S N + +FSAT +A++ + L+
Sbjct: 182 DSLF--GM-GFAEQLHQILTQLS-ENRQTLLFSATLPSALAEFAKAGLR 226
>gi|20072320|gb|AAH26492.1| Ddx46 protein [Mus musculus]
Length = 626
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + ++L G AVI+ PTRELA Q E +
Sbjct: 3 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF 62
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
S+ LGLR + G +Q AE K G ++++ TP +++ +L + + NL
Sbjct: 63 SKTLGLRVVCVYGGTGISEQIAELKRGA------EIIVCTPGRMIDMLAANSGRVTNLRR 116
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V ++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L +
Sbjct: 117 VTYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKP 172
Query: 219 VQINVGLR 226
+++ VG R
Sbjct: 173 IEVQVGGR 180
>gi|432094964|gb|ELK26372.1| ATP-dependent RNA helicase DDX54 [Myotis davidii]
Length = 829
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 99/168 (58%), Gaps = 14/168 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 84 GKDMVAMARTGSGKTACFLIPMFERLKARSAQSGARALILSPTRELALQTMKFTKELGKF 143
Query: 108 LGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIV 164
GL+ +I + ++F SA + D++I TP +L+++ ++M+ L L +VE+++
Sbjct: 144 TGLKTALILGGDKMEDQF---SALHENPDIIIATPGRLMHVAVEMN---LKLQSVEYVVF 197
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
DE+D+LFE GF +QL I + G + + +FSAT + + ++ R
Sbjct: 198 DEADRLFEM---GFAEQLQEIISRLPGGH-QTLLFSATLPKMLVEFAR 241
>gi|398866146|ref|ZP_10621647.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
gi|398241657|gb|EJN27303.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM78]
Length = 446
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 98/181 (54%), Gaps = 24/181 (13%)
Query: 33 FKHFEPHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIV 87
K EP PL GR + A TGSGKTAAF++PI++ L GP + + +I+
Sbjct: 18 LKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLIL 77
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNK 142
PTRELA+QT E R S+ +++ +I K+Q A + P D+LI TP +
Sbjct: 78 LPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGR 131
Query: 143 LVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSA 201
++ Q++ L+L VE L++DE+D++ + GF + + + C+ N ++ M FSA
Sbjct: 132 MIE--QLNAGNLDLKEVEVLVLDEADRMLDM---GFAEDVQRLVDECT--NRQQTMLFSA 184
Query: 202 T 202
T
Sbjct: 185 T 185
>gi|429770137|ref|ZP_19302216.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
gi|429185399|gb|EKY26379.1| putative ATP-dependent RNA helicase RhlE [Brevundimonas diminuta
470-4]
Length = 491
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 21/184 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TG+GKTAAF +PI+H L PK RA+I+ PTRELA Q + +
Sbjct: 33 GKDLLGIAQTGTGKTAAFALPILHRLAENRVAPKPRTTRALILSPTRELATQIADSFKQY 92
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRS---AQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
LG R V+ G + K+GP+ Q DVL+ P +L+ +Q L+L++ E
Sbjct: 93 GAHLGFRVAVVFGGV-----KYGPQERALQQGLDVLVAAPGRLLDHIQQK--TLDLSSTE 145
Query: 161 WLIVDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++DE+D++ + G ++ R ++ I A NL FSAT ++ K LK V
Sbjct: 146 IFVLDEADQMLDLGFIKPIRQIVSRIPAKRQ--NL---FFSATMPSEIGKLAGELLKDPV 200
Query: 220 QINV 223
++ V
Sbjct: 201 KVQV 204
>gi|62740160|gb|AAH94142.1| LOC495097 protein, partial [Xenopus laevis]
Length = 693
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 101/180 (56%), Gaps = 12/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 112 GKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKF 171
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 172 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLMHVAIEMN---LKLRSVEYVVFDE 227
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGL 225
+D+LFE GF +QL I + P ++ +FSAT + + ++ R L V I + +
Sbjct: 228 ADRLFEM---GFAEQLQEIISRL--PETRQTLLFSATLPKMLLEFARAGLTEPVLIRLDV 282
>gi|398870252|ref|ZP_10625599.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
gi|398209137|gb|EJM95820.1| DNA/RNA helicase, superfamily II [Pseudomonas sp. GM74]
Length = 446
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL--GFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C+ N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFAEDVQRLVDECT--NRQQTMLFSAT 185
>gi|241957775|ref|XP_002421607.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
gi|223644951|emb|CAX40951.1| ATP-dependent DEAD-box RNA helicase, ribosome assembly, putative
[Candida dubliniensis CD36]
Length = 592
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKT A++IPII L + + +I+ PTRELA Q Y +LS
Sbjct: 150 LGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHH 209
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L + V G ++Q E+ R D++I TP +L+ ++ + P+ ++ +++ L+
Sbjct: 210 VNNLNIGLAVGGLNLRQQEEQLKTRP----DIVIATPGRLIDHIR-NSPSFSVQDIQVLV 264
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+++L I + + +FSAT + + L++ V+I
Sbjct: 265 IDEADRMLE---EGFQEELTEILSLIPKHKRQTLLFSATMNTRIQDLIQLSLQKPVRI 319
>gi|160380699|sp|A7EYW0.2|DBP3_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp3
Length = 596
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 18/184 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF +P + + + KN G RAV+V PTRELA Q+Y + V+L
Sbjct: 216 GRDVIGVAETGSGKTMAFAVPCVRYMSSLPKNQKNKGPRAVVVSPTRELAMQSYEQIVKL 275
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ GL V G + + + R+ + D+++ TP +L L+ +L+ +++
Sbjct: 276 AKASGLECVCVYGGVPKDEQI---RALKTADIVVATPGRLNDLINQG--CADLSKARYVV 330
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNL-KRG--MFSATHTEDVAKWCRRKLKRRVQ 220
+DE+D++ + +GF +++ I P+L KR MF+AT E V + + V+
Sbjct: 331 LDEADRMLD---KGFEEEIRKIINTT--PSLGKRQTLMFTATWPESVRELASTFMTSPVK 385
Query: 221 INVG 224
I +G
Sbjct: 386 IAIG 389
>gi|49903707|gb|AAH75762.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++P++ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKL-SEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ +I G + + G ++K V++ TP +L ++ +NL +++LI+DE+
Sbjct: 98 GLKDCIIVGGMDMVTQ--GLELSKKPHVVVATPGRLADHIR-SSDTINLNRIQFLIMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L VI +A + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTKDLEVILSAVPAKR-QTLLFSATLTD 191
>gi|255543463|ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 514
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 98/182 (53%), Gaps = 15/182 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS-----LRGPKNLGFRAVIVCPTRELAKQTYNETVR 103
G+ + A A TGSGKTA++L+PII S L+ + A+++ PTREL Q ++
Sbjct: 157 GKSLLASADTGSGKTASYLVPIISSCASYRLQHSSDRKPLAMVLTPTRELCIQVEDQAKL 216
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+GL + A V+G A + + R Q ++++ TP +L+ LL + L N+
Sbjct: 217 FGKGLPFKTALVVGGDAMAGQLY--RIQQGVELIVGTPGRLIDLLTKHD--IELDNMIIF 272
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE D + + RGFRDQ+ I+ A S P + ++SAT T++V K K ++
Sbjct: 273 VIDEVDCMLQ---RGFRDQVMQIFWALSQPQVL--LYSATVTQEVEKMASSMAKDMALVS 327
Query: 223 VG 224
+G
Sbjct: 328 IG 329
>gi|72387978|ref|XP_844413.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62358560|gb|AAX79020.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei]
gi|70800946|gb|AAZ10854.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 843
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G I A A TGSGKTAAFLIP++H L+ K +G R +I+ PTREL+ Q +++S+
Sbjct: 63 GNDIVAMARTGSGKTAAFLIPMLHLLKAHSKIVGVRGLILSPTRELSMQILRFGIQISKF 122
Query: 108 LGLR--AHVIGK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A V G ++Q E A D+++ TP +++++ M+ +L L+ V+ +++
Sbjct: 123 LDLRFVALVGGNSLEQQFEML----ASNPDIVVATPGRILHI--MEEASLQLSMVKSIVL 176
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 177 DEADRLFELGL---QPQIVAIMQKIP-ESCQRSLFSAT 210
>gi|421502670|ref|ZP_15949623.1| DEAD/DEAH box helicase [Pseudomonas mendocina DLHK]
gi|400346654|gb|EJO95011.1| DEAD/DEAH box helicase [Pseudomonas mendocina DLHK]
Length = 441
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 17/160 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN----LGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TGSGKTAAF++P+++ L G N + RA+I+ PTRELA+QT E R
Sbjct: 37 GKDLRVIAQTGSGKTAAFVLPMLNRLLGDGNSQQRVSIRALILLPTRELAQQTLKEVERF 96
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
++ L+A ++ E F ++A +K D+LI TP +L+ + L L +VE L
Sbjct: 97 AQFTFLKAGLV----TGGEDFKVQAAMMRKIDILIGTPGRLIE--HANAGNLPLGDVEVL 150
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+ DE+D++ + GF + + AC GP+ + +FSAT
Sbjct: 151 VFDEADRMLDM---GFAEDAQRLAEAC-GPH-QTLLFSAT 185
>gi|261327581|emb|CBH10557.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 843
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G I A A TGSGKTAAFLIP++H L+ K +G R +I+ PTREL+ Q +++S+
Sbjct: 63 GNDIVAMARTGSGKTAAFLIPMLHLLKAHSKIVGVRGLILSPTRELSMQILRFGIQISKF 122
Query: 108 LGLR--AHVIGK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A V G ++Q E A D+++ TP +++++ M+ +L L+ V+ +++
Sbjct: 123 LDLRFVALVGGNSLEQQFEML----ASNPDIVVATPGRILHI--MEEASLQLSMVKSIVL 176
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 177 DEADRLFELGL---QPQIVAIMQKIP-ESCQRSLFSAT 210
>gi|391865804|gb|EIT75083.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 928
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G R +I+ P+RELA QT L +G
Sbjct: 126 GQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGKG 185
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L++ ++ E+F + D++I TP + ++L ++M+ L+L+++ +++ DE
Sbjct: 186 TDLKSVLLVGGDSLEEQFSLMAGNP-DIVIATPGRFLHLKVEMN---LDLSSIRYVVFDE 241
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF DQL I N + +FSAT + + ++ R L+
Sbjct: 242 ADRLFEM---GFADQLTEILYGLPA-NRQTLLFSATLPKSLVEFARAGLQ 287
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 13/181 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF++P I+H + P K G VI PTRELA Q Y E +
Sbjct: 251 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLEAKKF 310
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++ L+ A V G + + E+F + ++++ TP +L+ LL+M AL + +L+
Sbjct: 311 AKPYNLQVAAVYGGVSK-FEQFKELKS-GCEIVVATPGRLIDLLKMK--ALRMFRATYLV 366
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I P+ + +FSAT V + R L +++ V
Sbjct: 367 LDEADRMFDL---GFEPQIRSIVGQIR-PDRQTLLFSATMPYKVERLAREILTDPIRVTV 422
Query: 224 G 224
G
Sbjct: 423 G 423
>gi|149910407|ref|ZP_01899049.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
gi|149806555|gb|EDM66524.1| ATP-dependent RNA helicase, DEAD box family [Moritella sp. PE36]
Length = 460
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 20/184 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G I A + TGSGKT A+ +PI+ + R ++ RAVI+ PTRELA Q + L
Sbjct: 38 GCDIMATSQTGSGKTIAYGLPILQRMLKQRRFEHRAVRAVILAPTRELAIQVHANMKHLG 97
Query: 106 EGLGLRAH-VIGKIQ-QAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L + +IG+ Q EK ++ + VLI TP +L L + +++L ++E+L+
Sbjct: 98 MSLDYQIQLIIGRESFQHQEKLLRKNPE---VLIATPGRL--LDHIREKSISLEHLEFLV 152
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTE-DVAKWCRRKLK--RR 218
+DE+D++ + GFRD ++ I + S PN+KR +FSAT DVA C + L+ R
Sbjct: 153 LDEADRMLDM---GFRDDVSAI--SNSAPNVKRQTMLFSATLEHVDVANICNQVLRAPER 207
Query: 219 VQIN 222
++IN
Sbjct: 208 IEIN 211
>gi|126323567|ref|XP_001370574.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Monodelphis
domestica]
Length = 491
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPILQKL-SEDPFGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ +I G + A+ ++K V+I TP +L L+ N+ + +L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLR-SSNTFNIKKIRFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L VI+ A + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTKDLEVIFDAAPAQR-QTLLFSATLTD 191
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 89/157 (56%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKTAAF+IP+I L+ N RA+I+ P RELA QT S+G
Sbjct: 106 GRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKG 165
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
LR+ I E+F S K D+++ TP + ++L ++M L L+++E+++ DE
Sbjct: 166 TDLRSVAIVGGVSLEEQFSLLSG-KPDIVVATPGRFLHLKVEM---KLELSSIEYVVFDE 221
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF QL I A P ++ +FSAT
Sbjct: 222 ADRLFEM---GFAAQLTEILHAL--PTSRQTLLFSAT 253
>gi|185132644|ref|NP_001117993.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
gi|52547136|gb|AAU81664.1| myc-regulated DEAD box protein [Oncorhynchus mykiss]
Length = 663
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 23 TTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-G 76
TL V F+H + PL GR I A A TGSGKT AFLIP +I+ L+
Sbjct: 181 NTLKGVKEMGFEHM-TEIQHKSIQPLLEGRDILAAAKTGSGKTLAFLIPSIELIYKLKFM 239
Query: 77 PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFD 134
P+N G VI+ PTRELA QTY + E + H G I + + R A +
Sbjct: 240 PRN-GTGVVILSPTRELAMQTYG---VMKELMTHHVHTFGLIMGGSNRTAEAQRLANGVN 295
Query: 135 VLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNL 194
+L+ TP +L+ LQ + N++ LI+DE+D++ E GF ++L I P
Sbjct: 296 ILVATPGRLLDHLQ-NAAGFMYKNLQCLIIDEADRILEV---GFEEELKQIIKLL--PKR 349
Query: 195 KRGM-FSATHTEDVAKWCRRKLKRR 218
++ M FSAT T V R LK+
Sbjct: 350 RQTMLFSATQTRKVEDLARISLKKE 374
>gi|164687249|ref|ZP_02211277.1| hypothetical protein CLOBAR_00890 [Clostridium bartlettii DSM
16795]
gi|164603673|gb|EDQ97138.1| DEAD/DEAH box helicase [Clostridium bartlettii DSM 16795]
Length = 371
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 98/179 (54%), Gaps = 16/179 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS--E 106
+ I A + TG+GKT AFLIPI S+ PKN + +I+ PTRELA Q YNE +L+ +
Sbjct: 38 NKDILAQSQTGTGKTLAFLIPIFDSI-SPKNQNIQTLILAPTRELAIQIYNEAEKLNKDK 96
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+ + A GK ++ R+ Q ++I TP +L L +D +++L+ + L++DE
Sbjct: 97 NINVLAAYGGKDIKSQLNKLKRNIQ---LVIATPGRL--LDHLDRKSIDLSKLNTLVLDE 151
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM--FSATHTEDVAKWCRRKLKRRVQINV 223
+D++ + GF++++ I N KR FSAT V K R +K V++ +
Sbjct: 152 ADQMI---LMGFKNEIEAIIKET---NKKRQTLCFSATLDSQVKKLAYRYMKDPVEVTI 204
>gi|391327051|ref|XP_003738021.1| PREDICTED: ATP-dependent RNA helicase DDX51-like [Metaseiulus
occidentalis]
Length = 429
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 36 FEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAK 95
+P + I L P R I APTGSGKT A+++P+I L+G RAVI+ PT ELAK
Sbjct: 10 LDPRYDIMGLPP--RDICVAAPTGSGKTLAYVLPLIKLLKGLFEKAIRAVILLPTSELAK 67
Query: 96 QTYNETVRLSEGLGLRAHVIGKIQQAAEKFG---PRSAQKFDVLITTPNKLVYLLQMDPP 152
Q Y+ R + L A ++ ++ +E+ R DV+I TP + L++ P
Sbjct: 68 QVYDVFTRYAAPFQLSAALLTGLKSHSEEVKTLLERGHPIVDVVIATPKTFLNHLRL-TP 126
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGF 178
NL V L++DE+D++ + + G
Sbjct: 127 GFNLRLVSHLVLDEADRMVDMVIHGL 152
>gi|385304329|gb|EIF48351.1| atp-dependent rna helicase [Dekkera bruxellensis AWRI1499]
Length = 442
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
G+ + A TGSGKT AFLIP +++SL+ P+N G A+++ PTRELA Q + L
Sbjct: 15 GKDVLGAAKTGSGKTLAFLIPAIELLYSLKFKPRN-GTGAIVITPTRELALQIFGVAREL 73
Query: 105 ----SEGLGLRAHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
S+ LG+ VIG +Q AEK A+ ++LI TP +L+ LQ + N
Sbjct: 74 MAHHSQTLGI---VIGGANRRQEAEKL----AKGVNLLIATPGRLLDHLQ-NTRGFVFKN 125
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
+ LI DE+D++ E GF D++ I + + +FSAT T V R LK+
Sbjct: 126 LRTLIFDEADRILEI---GFEDEIRQIVKILPNEDRQTMLFSATQTTKVEDLARAALKKA 182
Query: 219 -VQINVGLR 226
V INV R
Sbjct: 183 PVYINVSER 191
>gi|301754403|ref|XP_002913034.1| PREDICTED: probable ATP-dependent RNA helicase DDX27-like
[Ailuropoda melanoleuca]
Length = 764
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 222 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 281
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 282 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 334
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 335 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 390
Query: 221 INV 223
I V
Sbjct: 391 IFV 393
>gi|85095256|ref|XP_960042.1| hypothetical protein NCU05782 [Neurospora crassa OR74A]
gi|74615933|sp|Q7S5R1.1|DBP3_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-3
gi|28921501|gb|EAA30806.1| hypothetical protein NCU05782 [Neurospora crassa OR74A]
Length = 614
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---------RAVIVCPTRELAKQTYN 99
GR + A TGSGKT AF +P + SL F RAVIV PTRELA QT+
Sbjct: 216 GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 275
Query: 100 ETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +GL A I G + ++ D++ TP +L L +++LAN
Sbjct: 276 ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEG--SISLAN 333
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLK 216
V + ++DE+D++ + RGF + + +I + C P +R MF+AT D+ K +
Sbjct: 334 VSFAVLDEADRMLD---RGFSEDIKLILSGCP-PKEQRQTLMFTATWPLDIQKLAESYMI 389
Query: 217 RRVQINVGLR 226
Q+ +G R
Sbjct: 390 NPAQVTIGHR 399
>gi|47121785|gb|AAT11555.1| vasa-like protein [Copidosoma floridanum]
gi|47175561|gb|AAT12450.1| vasa protein [Copidosoma floridanum]
Length = 708
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 23/192 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL----RGPKNLGF------RAVIVCPTRELAKQTY 98
GR + CA TGSGKTAAFLIPIIH+L R ++G RA+I+ PTRELA Q +
Sbjct: 317 GRDLMGCAQTGSGKTAAFLIPIIHNLLLKPREINDMGSLSTVEPRALILAPTRELAIQIH 376
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF---DVLITTPNKLVYLLQMDPPALN 155
+E + S+ L+ +I G + Q F D+L+ TP +L + +
Sbjct: 377 DECRKFSKDSVLKCCLI----YGGTAVGHQLKQIFYGCDLLVATPGRLKDFVGRG--KVV 430
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRR 213
+ +E+L++DE+D++ + G G D VI P +R MFSAT D+ + +
Sbjct: 431 FSAIEYLVLDEADRMIDMGFIG--DVEMVIRHETMTPPGERQTLMFSATFPRDIQELAVK 488
Query: 214 KLKRRVQINVGL 225
L + + VG+
Sbjct: 489 FLNNYIFVAVGI 500
>gi|169773155|ref|XP_001821046.1| ATP-dependent RNA helicase DBP10 [Aspergillus oryzae RIB40]
gi|238491104|ref|XP_002376789.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
gi|91208275|sp|Q2UHC1.1|DBP10_ASPOR RecName: Full=ATP-dependent RNA helicase dbp10
gi|83768907|dbj|BAE59044.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697202|gb|EED53543.1| ATP dependent RNA helicase (Dbp10), putative [Aspergillus flavus
NRRL3357]
Length = 929
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKTAAF+IP+I L+ +G R +I+ P+RELA QT L +G
Sbjct: 126 GQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGKG 185
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L++ ++ E+F + D++I TP + ++L ++M+ L+L+++ +++ DE
Sbjct: 186 TDLKSVLLVGGDSLEEQFSLMAGNP-DIVIATPGRFLHLKVEMN---LDLSSIRYVVFDE 241
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+D+LFE GF DQL I N + +FSAT + + ++ R L+
Sbjct: 242 ADRLFEM---GFADQLTEILYGLPA-NRQTLLFSATLPKSLVEFARAGLQ 287
>gi|119596074|gb|EAW75668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_d [Homo
sapiens]
Length = 763
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 254 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 313
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 314 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 366
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 367 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 422
Query: 221 INV 223
I V
Sbjct: 423 IFV 425
>gi|32425487|gb|AAH09304.2| DDX27 protein, partial [Homo sapiens]
Length = 769
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 227 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 286
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 287 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 339
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 340 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 395
Query: 221 INV 223
I V
Sbjct: 396 IFV 398
>gi|330808146|ref|YP_004352608.1| ATP-dependent RNA helicase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423695930|ref|ZP_17670420.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
gi|327376254|gb|AEA67604.1| putative ATP-dependent RNA helicase [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|388009311|gb|EIK70562.1| DEAD/DEAH box helicase domain protein [Pseudomonas fluorescens
Q8r1-96]
Length = 448
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN--LGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKTAAF++PI++ L GP + + +I+ PTRELA+QT E R S+
Sbjct: 37 GRDLRVTAQTGSGKTAAFVLPILNRLIGPAKVRVSIKTLILLPTRELAQQTLKEVERFSQ 96
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ +I K+Q A + P D+LI TP +++ Q++ L+L VE
Sbjct: 97 FTFIKSGLITGGEDFKVQAAMLRKVP------DILIGTPGRMIE--QLNAGNLDLKEVEV 148
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSAT 202
L++DE+D++ + GF + + + C+ N ++ M FSAT
Sbjct: 149 LVLDEADRMLDM---GFAEDVQRLVDECT--NRQQTMLFSAT 185
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 20/188 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + ++L G AVI+ PTRELA Q E +
Sbjct: 351 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKF 410
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
S+ LGLR + G +Q AE K G ++++ TP +++ +L + + NL
Sbjct: 411 SKALGLRVVCVYGGTGISEQIAELKRGA------EIIVCTPGRMIDMLAANSGRVTNLRR 464
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V ++++DE+D++F+ GF Q+ I P+ + MFSAT + RR L +
Sbjct: 465 VTYVVLDEADRMFDM---GFEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILNKP 520
Query: 219 VQINVGLR 226
V++ VG R
Sbjct: 521 VEVQVGGR 528
>gi|189342956|gb|ACD91989.1| DEAD box polypeptide 27 [Homo sapiens]
gi|313883628|gb|ADR83300.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 765
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|146099084|ref|XP_001468551.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
gi|134072919|emb|CAM71636.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
Length = 803
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 24/163 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ Q L++
Sbjct: 59 GNDVVAMARTGSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKF 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKF-------DVLITTPNKLVYLLQMDPPALNLANV 159
L LR A ++G G Q+F DV++ TP +L+++ M+ +L+L +V
Sbjct: 119 LDLRFAALVG---------GDSMDQQFELLASNPDVVVATPGRLLHI--MEEASLHLTSV 167
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 168 RCLVLDEADRLFELGL---QPQIGAIMQKLP-ESCQRALFSAT 206
>gi|398022356|ref|XP_003864340.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
gi|322502575|emb|CBZ37658.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
Length = 803
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 24/163 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ Q L++
Sbjct: 59 GNDVVAMARTGSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKF 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKF-------DVLITTPNKLVYLLQMDPPALNLANV 159
L LR A ++G G Q+F DV++ TP +L+++ M+ +L+L +V
Sbjct: 119 LDLRFAALVG---------GDSMDQQFELLASNPDVVVATPGRLLHI--MEEASLHLTSV 167
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 168 RCLVLDEADRLFELGL---QPQIGAIMQKLP-ESCQRALFSAT 206
>gi|336124129|ref|YP_004566177.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
gi|335341852|gb|AEH33135.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
Length = 485
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
G+ + A A TG+GKTA F +PI+ L +GPK +G RA+I+ PTRELA Q +
Sbjct: 59 GKDVMAAAQTGTGKTAGFTLPILDLLVKGPK-VGPNQVRALILTPTRELAAQVADNVATY 117
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ L LR+ VI G ++ + R D+L+ TP +L+ L + A+ +E L+
Sbjct: 118 GQNLPLRSEVIFGGVKVNPQMMKMRRG--VDILVATPGRLLDLYNQN--AIKFNQLEILV 173
Query: 164 VDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + G +R + LA++ A NL +FSAT ++++ + + + V+I+
Sbjct: 174 LDEADRMLDMGFIRDIKKILALLPAKRQ--NL---LFSATFSDEIRQLAKGLVNNPVEIS 228
Query: 223 VGLR 226
V R
Sbjct: 229 VTPR 232
>gi|365539790|ref|ZP_09364965.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
Length = 465
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 16/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG---FRAVIVCPTRELAKQTYNETVRL 104
G+ + A A TG+GKTA F +PI+ L +GPK +G RA+I+ PTRELA Q +
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPILDLLVKGPK-VGPNQVRALILTPTRELAAQVADNVATY 96
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ L LR+ VI G ++ + R D+L+ TP +L+ L + A+ +E L+
Sbjct: 97 GQNLPLRSEVIFGGVKVNPQMMKMRRG--VDILVATPGRLLDLYNQN--AIKFNQLEILV 152
Query: 164 VDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + G +R + LA++ A NL +FSAT ++++ + + + V+I+
Sbjct: 153 LDEADRMLDMGFIRDIKKILALLPAKRQ--NL---LFSATFSDEIRQLAKGLVNNPVEIS 207
Query: 223 VGLR 226
V R
Sbjct: 208 VTPR 211
>gi|366999310|ref|XP_003684391.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
gi|357522687|emb|CCE61957.1| hypothetical protein TPHA_0B02850 [Tetrapisispora phaffii CBS 4417]
Length = 628
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRG-----PKNLGFR--------AVIVCPTRELA 94
GR + ACA TGSGKT FL P++ S + P++L A+++ PTRELA
Sbjct: 192 GRDLMACAQTGSGKTGGFLFPVLSQSFKNGPAPVPEDLKRSFLRKGNPTALVLAPTRELA 251
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF-DVLITTPNKLVYLLQMDPPA 153
Q Y+E + + +R VI + R ++ D+L+ TP +L LL+
Sbjct: 252 TQIYDEAKKFTYRSWVRPVVIYGGSDVGTQI--RELERGCDLLVATPGRLNDLLERG--R 307
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP---NLKRGMFSATHTEDVAKW 210
++LANV++L++DE+D++ + GF Q+ I C P N + MFSAT +D+
Sbjct: 308 VSLANVKYLVLDEADRMLDM---GFEPQIRHIVDGCDMPDANNRQTLMFSATFPDDIQHL 364
Query: 211 CRRKLKRRVQINVG 224
R L + ++VG
Sbjct: 365 ARDFLNDYIFLSVG 378
>gi|341900203|gb|EGT56138.1| hypothetical protein CAEBREN_02977 [Caenorhabditis brenneri]
Length = 982
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 102/186 (54%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P+ G A+I+ PTRELA QTY E +
Sbjct: 351 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAIILAPTRELAMQTYKEANKF 410
Query: 105 SEGLGLRAHV----IGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
++ LGLR +G +Q A+ K G ++++ TP +++ +L + + NL
Sbjct: 411 AKVLGLRVACTYGGVGISEQIADLKRGA------EIVVCTPGRMIDMLAANGGKVTNLRR 464
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V +L++DE+D++F+ +GF Q+ + P+ + +FSAT + R+ L +
Sbjct: 465 VTYLVLDEADRMFD---KGFEPQIMKVVNNIR-PDKQTVLFSATFPRHMDALARKALDKP 520
Query: 219 VQINVG 224
V+I VG
Sbjct: 521 VEILVG 526
>gi|221043088|dbj|BAH13221.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|449279979|gb|EMC87401.1| ATP-dependent RNA helicase DDX18, partial [Columba livia]
Length = 544
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 96/178 (53%), Gaps = 24/178 (13%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A A TGSGKT AFLIP +I+ L+ P+N G +I+ PTRELA QTY L
Sbjct: 90 GRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRN-GTGVIILSPTRELAMQTYG---VL 145
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPALNLANVE 160
E + H G I + + AQK +V++ TP +L+ +Q + P N++
Sbjct: 146 KELMNHHVHTYGLIMGGSNRSA--EAQKLGNGINVIVATPGRLLDHMQ-NTPGFMYKNLQ 202
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHT---EDVAKWCRRK 214
L++DE+D++ E GF +++ I P ++ M FSAT T ED+AK +K
Sbjct: 203 CLVIDEADRILEV---GFEEEMKQIIKLL--PKRRQTMLFSATQTRKVEDLAKISLKK 255
>gi|336467732|gb|EGO55896.1| hypothetical protein NEUTE1DRAFT_124213 [Neurospora tetrasperma
FGSC 2508]
gi|350287611|gb|EGZ68847.1| ATP-dependent RNA helicase dbp-3 [Neurospora tetrasperma FGSC 2509]
Length = 613
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---------RAVIVCPTRELAKQTYN 99
GR + A TGSGKT AF +P + SL F RAVIV PTRELA QT+
Sbjct: 215 GRDVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHA 274
Query: 100 ETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L+ +GL A I G + ++ D++ TP +L L +++LAN
Sbjct: 275 ALSGLASLVGLSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEG--SISLAN 332
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLK 216
V + ++DE+D++ + RGF + + +I + C P +R MF+AT D+ K +
Sbjct: 333 VSFAVLDEADRMLD---RGFSEDIKLILSGCP-PKEQRQTLMFTATWPLDIQKLAESYMI 388
Query: 217 RRVQINVGLR 226
Q+ +G R
Sbjct: 389 NPAQVTIGHR 398
>gi|448098046|ref|XP_004198829.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
gi|359380251|emb|CCE82492.1| Piso0_002219 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 97/179 (54%), Gaps = 9/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT F +P +++ G + + V PTRELA Q Y+ +++
Sbjct: 180 GKDVVGVAETGSGKTLGFGVPAVNNFLRLGKQGLKILCVSPTRELAVQIYDNLAEVTKST 239
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
++ V+ G + + + + A +V++ TP +L+ ++ + A+NL V++L++DE+
Sbjct: 240 SVKCTVLYGGVPKYEQIENLKGA---NVVVATPGRLIDII--NDGAINLGTVDYLVLDEA 294
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + I +G + + MF+AT ++V + + V++N+G R
Sbjct: 295 DRMLE---KGFEQDIKTIMQNTAGASRQTVMFTATWPKEVRELASSFMNNPVKVNIGNR 350
>gi|254567599|ref|XP_002490910.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|238030707|emb|CAY68630.1| Putative ATP-dependent RNA helicase of the DEAD-box family involved
in ribosomal biogenesis [Komagataella pastoris GS115]
gi|328352552|emb|CCA38951.1| hypothetical protein PP7435_Chr2-1277 [Komagataella pastoris CBS
7435]
Length = 498
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 98/179 (54%), Gaps = 10/179 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A TGSGKT AF +P I + + G + +++ PTRELA Q Y+ +L++
Sbjct: 129 GNDVIGVAETGSGKTFAFGVPAISHVLQKNSKGLQVLVISPTRELAVQIYDNLKQLTDLC 188
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL I G + + ++ R ++ +I TP +L+ L M+ +++L + +L++DE+
Sbjct: 189 GLECCCIYGGVSKDDQR---RQVKQSQCVIATPGRLLDL--MEEGSIDLTGINYLVLDEA 243
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + I A + + + MF+AT ++V + +K V++ VG R
Sbjct: 244 DRMLE---KGFEEAIKSIMANVN-TDRQTLMFTATWPKEVRELASHFMKSPVKVTVGDR 298
>gi|74224046|dbj|BAE23880.1| unnamed protein product [Mus musculus]
Length = 309
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 6/158 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ +I G + A+ ++K V+I TP +L L+ N+ +++L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLR-SSNTFNMKKIQFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L I AA + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTTDLETILAAVPARR-QTLLFSATLTD 191
>gi|38198641|ref|NP_938179.1| probable ATP-dependent RNA helicase DDX49 [Danio rerio]
gi|28839770|gb|AAH47834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Danio rerio]
Length = 468
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 6/158 (3%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++P++ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKL-SEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ +I G + + G ++K V++ TP +L ++ +NL +++LI+DE+
Sbjct: 98 GLKDCIIVGGMDMVTQ--GLELSKKPHVVVATPGRLADHIR-SSDTINLNRIQFLIMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L VI +A + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTKDLEVILSAVPAKR-QTLLFSATLTD 191
>gi|40225538|gb|AAH11927.2| DDX27 protein, partial [Homo sapiens]
gi|48257213|gb|AAH16060.2| DDX27 protein, partial [Homo sapiens]
Length = 767
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 18/184 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 225 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 284
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 285 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 337
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 338 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 393
Query: 221 INVG 224
I V
Sbjct: 394 IFVN 397
>gi|358449520|ref|ZP_09160004.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
gi|357226275|gb|EHJ04756.1| DEAD/DEAH box helicase domain-containing protein [Marinobacter
manganoxydans MnI7-9]
Length = 440
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPK-NLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A A TG+GKTA F +P++ L P+ G RA+I+ PTRELA Q ++ S+
Sbjct: 38 GRDVMAAAQTGTGKTAGFTLPLLQRLGENPRTGKGPRALILTPTRELAAQVHDSVNLYSK 97
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ +A V+ G ++ + R DVL+ TP +L+ L Q + A+ VE L++D
Sbjct: 98 YVPTKAAVVFGGVKINPQMMKLRKG--LDVLVATPGRLMDLYQQN--AVRFNEVEILVLD 153
Query: 166 ESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D++ + G +R R LA++ A NL +FSAT + ++ L VQ+ V
Sbjct: 154 EADRMLDMGFIRDIRKILALLPAKRQ--NL---LFSATFSNEIRTLAEGLLDNPVQVEVA 208
Query: 225 LR 226
R
Sbjct: 209 AR 210
>gi|302036818|ref|YP_003797140.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|190343232|gb|ACE75620.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
gi|300604882|emb|CBK41215.1| ATP-dependent RNA helicase [Candidatus Nitrospira defluvii]
Length = 431
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 11/177 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + CA TG+GKTAAF+IP++ L G RA+I+ PTRELA Q L L
Sbjct: 44 GRDVLGCAQTGTGKTAAFVIPMLERLSGTPKGQPRALILAPTRELAIQIQATIDTLGRDL 103
Query: 109 GLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
L A V+G A+ G R Q+ D+++ TP +L L M ++L + L++DE+
Sbjct: 104 QLFATTVVGGADMQAQVRGLR--QRPDIIVATPGRL--LDHMWNGTISLLAMSILVLDEA 159
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
D++ + GF Q+ I A P ++ +FSAT D+A+ + +K V++ V
Sbjct: 160 DRMLDM---GFAQQINQILDAM--PEERQTLLFSATMPNDLARLAQASVKDPVRVMV 211
>gi|71004804|ref|XP_757068.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
gi|46096872|gb|EAK82105.1| hypothetical protein UM00921.1 [Ustilago maydis 521]
Length = 870
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 31/201 (15%)
Query: 8 ALGIFT-IGFVISIIVTTLAV-VSNSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAA 65
ALGI +S+I LA S S+++ F P R + APTGSGKT A
Sbjct: 360 ALGISEWFAVQVSVIPCLLAQPQSRSLYRPFAP----------PRDLCVSAPTGSGKTLA 409
Query: 66 FLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR----------AHVI 115
+ +PI+ LR + + RA+IV PTR+L Q + +++G GLR AH
Sbjct: 410 YSVPIVEVLRTRQIVRLRALIVLPTRDLVSQVRSTLELVAKGSGLRIGTATGQHSFAHEQ 469
Query: 116 GKIQQAA-----EKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKL 170
++ ++ ++ +S K D+LI TP +L+ L P NLA++ +L+VDE+D+L
Sbjct: 470 NQLVGSSSAVDQDQDEAQSEPKIDILIATPGRLIDHLDST-PGFNLAHLRFLVVDEADRL 528
Query: 171 FEAGVRGFRDQLAVIYAACSG 191
+ F++ L + AA +G
Sbjct: 529 LN---QSFQEWLRRVLAATNG 546
>gi|10434683|dbj|BAB14343.1| unnamed protein product [Homo sapiens]
Length = 765
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|340723049|ref|XP_003399911.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX54-like [Bombus terrestris]
Length = 772
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTA FLIP+ L+ + G RA+I+ PTRELA QT L +
Sbjct: 73 GRDVVAMARTGSGKTACFLIPLFEKLKTRRAKAGARALILSPTRELALQTLKFIKELGKF 132
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
L+A VI +F D+L+ TP + +++ ++MD L L N+E+++ DE
Sbjct: 133 TDLKAAVILGGDSMENQFSAIHGNP-DILVATPGRFLHICIEMD---LQLNNIEYVVFDE 188
Query: 167 SDKLFEAGVRGFRDQLAVI 185
+D+LFE GF +Q+ I
Sbjct: 189 ADRLFEM---GFGEQITEI 204
>gi|389644026|ref|XP_003719645.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
gi|152013475|sp|A4R5B8.1|DBP10_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP10
gi|351639414|gb|EHA47278.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae 70-15]
Length = 914
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I LR +G RA+I+ P+RELA QT +G
Sbjct: 128 RDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGT 187
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ ++FG + D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 188 DLKTVLLVGGDSLEDQFGFMTTNP-DIIIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 243
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I + P+ + +FSAT + ++ R L+
Sbjct: 244 DRLFEM---GFATQLTEILHSLP-PSRQTLLFSATLPRSLVEFARAGLQ 288
>gi|365991671|ref|XP_003672664.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
gi|343771440|emb|CCD27421.1| hypothetical protein NDAI_0K02300 [Naumovozyma dairenensis CBS 421]
Length = 709
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 19 SIIVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPK 78
+I++ T+ N K + HFT +G I A TGSGKT A+ IPII +L K
Sbjct: 254 TILLDTILPTLNFSLKTTKKHFT----RRVG-DILVNASTGSGKTLAYSIPIIQTLSKRK 308
Query: 79 NLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLIT 138
RA+I+ PT+ L Q Y+ +LS+G GL + E+ + D+LIT
Sbjct: 309 VNKLRALIIVPTKLLIHQVYDTLSKLSQGTGLIITMSKLENSLKEEHIKLQTNEPDILIT 368
Query: 139 TPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQL 182
TP +LV L M+ + NL N++ L++DE+D+L + + ++L
Sbjct: 369 TPGRLVDHLNMN--SFNLKNLKMLVLDEADRLLNQSFQNWCNEL 410
>gi|323453556|gb|EGB09427.1| hypothetical protein AURANDRAFT_53132 [Aureococcus anophagefferens]
Length = 790
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 15/186 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK----NLGFRAVIVCPTRELAKQTYNETVR 103
GR + A TGSGKT AF++P++ H + P G A+I+ P RELA Q + E R
Sbjct: 118 GRDVIGIAKTGSGKTLAFVLPLLRHIMDQPPIVDGGDGPVALILAPARELALQIWREAKR 177
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVE 160
+ LGLRA + + A++ R A+ +++ TP +L+ +L M L L V
Sbjct: 178 FANPLGLRAIAVYGGAKVADQIADLKRGAE---IVVATPGRLIDILTMSQGRLIGLRRVS 234
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
++++DE+D++F+ GF Q+A+I P+ + +FSAT V + R+ L ++
Sbjct: 235 YVVLDEADRMFDM---GFEPQIAMILRNAR-PDRQTALFSATFPRAVEQLARKALSYPLE 290
Query: 221 INVGLR 226
I G R
Sbjct: 291 IVAGGR 296
>gi|291237232|ref|XP_002738539.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18-like
[Saccoglossus kowalevskii]
Length = 634
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 93/175 (53%), Gaps = 17/175 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKT AFLIP ++H L+ P+N G +I+ PTREL+ QTY L
Sbjct: 178 GRDLLAAAQTGSGKTLAFLIPCIELLHKLKFMPRN-GTGVIIISPTRELSMQTYG---VL 233
Query: 105 SEGLGLRAHVIGKIQQAAEKF--GPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
E L H G I A + + + ++++ TP +L+ LQ + P N++ L
Sbjct: 234 REVLKYHYHTFGLIMGGANRAEESKKLGKGVNIVVATPGRLLDHLQ-NSPQFMYKNLQCL 292
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
++DE+D++ E GF +++ I P ++ M FSAT T+ + R LK
Sbjct: 293 VIDEADRILEV---GFEEEMKQIMKLL--PKRRQTMLFSATQTKKIENLARLSLK 342
>gi|224085049|ref|XP_002307470.1| predicted protein [Populus trichocarpa]
gi|222856919|gb|EEE94466.1| predicted protein [Populus trichocarpa]
Length = 510
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 11/171 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G + A A TGSGKTAAFL+P++ L+ P++ G RA+I+ PTR+LA QT T L
Sbjct: 62 GIDVVAMARTGSGKTAAFLLPMLEKLKQHLPQS-GVRALILSPTRDLALQTLKFTKELGR 120
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVD 165
LR ++ + +F S Q D++I TP +L+ +L ++D ++L VE+++ D
Sbjct: 121 FTDLRISLLVGGDRMESQFEDLS-QNPDIIIATPGRLMHHLSEID--DMSLKTVEYVVFD 177
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
E+D LF GF +QL I S N + +FSAT +A++ + L+
Sbjct: 178 EADSLFGM---GFAEQLHKILTQLS-ENRQTLLFSATLPSALAEFAKAGLR 224
>gi|359494643|ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
vinifera]
gi|297736137|emb|CBI24175.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 17/165 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A TGSGKTAAF +PI+H L G A++V PTRELA Q + L L
Sbjct: 88 GDDVLGLAQTGSGKTAAFALPILHRL-AEDPFGVFALVVTPTRELAYQLAEQFRALGSCL 146
Query: 109 GLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP--PALNLANVEWL 162
LR V+ I QA Q+ V+I TP ++ LL+ +P PA+ A ++L
Sbjct: 147 HLRCAVVVGGMDMINQAQTLM-----QRPHVVIATPGRVKVLLEQNPDIPAV-FARTKFL 200
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
++DE+D++ + GF ++L V++ C N + +FSAT T D+
Sbjct: 201 VLDEADRVLDV---GFEEELRVVF-QCLPKNRQTLLFSATMTSDL 241
>gi|452125822|ref|ZP_21938405.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|452129183|ref|ZP_21941759.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
gi|451920917|gb|EMD71062.1| ATP-dependent RNA helicase [Bordetella holmesii F627]
gi|451925053|gb|EMD75193.1| ATP-dependent RNA helicase [Bordetella holmesii H558]
Length = 457
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 18/187 (9%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TG+GKTAAF +PI+H L P RA+I+ PTRELA Q Y
Sbjct: 27 GRDVMGAAQTGTGKTAAFTVPILHRLMPLANSSASPARHPVRALILTPTRELADQVYESV 86
Query: 102 VRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
R S LR+ V+ G + +K R + ++L+ TP +L L ++ +NL+ V
Sbjct: 87 KRYSLHTPLRSAVVFGGVDIGPQKEALR--RGCEILVATPGRL--LDHVEQKNVNLSQVG 142
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + GF L I P ++G +FSAT + ++ K R L + +
Sbjct: 143 ILVLDEADRMLDM---GFLPDLERIIRLL--PPQRQGLLFSATFSNEIRKLGRSYLNQPI 197
Query: 220 QINVGLR 226
++ V R
Sbjct: 198 ELEVAAR 204
>gi|440633330|gb|ELR03249.1| hypothetical protein GMDG_01232 [Geomyces destructans 20631-21]
Length = 672
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 95/207 (45%), Gaps = 42/207 (20%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG------------------PKNLGFRA----VI 86
G I ACA TGSGKT AFLIP + L G P+N RA +I
Sbjct: 181 GHDIVACAQTGSGKTGAFLIPTLSKLMGKAKKLCAPRPNPATFVPDPRNF-TRAEPLMLI 239
Query: 87 VCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRS------AQKFDVLITTP 140
VCP RELA Q +NE R LR V+ GPR A+ DVLI TP
Sbjct: 240 VCPNRELAVQIFNEARRFCYRSMLRPCVV-------YGGGPRRDQLNQIAKGCDVLIGTP 292
Query: 141 NKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP--NLKRGM 198
+LV + +P L+L ++++IVDE+D++ + + D+ VI N+ M
Sbjct: 293 GRLVDFITNEPERLSLCRLKYMIVDEADEMLSS---DWEDEFKVIMNGGDQEDGNITYMM 349
Query: 199 FSATHTEDVAKWCRRKLKRR-VQINVG 224
FSAT + + L V+I VG
Sbjct: 350 FSATFPKAARDLAKEHLANDFVRIRVG 376
>gi|54038020|gb|AAH84268.1| LOC495097 protein, partial [Xenopus laevis]
Length = 717
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 112 GKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKF 171
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 172 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLMHVAIEMN---LKLRSVEYVVFDE 227
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL I + P ++ +FSAT
Sbjct: 228 ADRLFEM---GFAEQLQEIISRL--PETRQTLLFSAT 259
>gi|297707298|ref|XP_002830447.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Pongo abelii]
Length = 765
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 282
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 335
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 336 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 391
Query: 221 INV 223
I V
Sbjct: 392 IFV 394
>gi|149239594|ref|XP_001525673.1| hypothetical protein LELG_03601 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451166|gb|EDK45422.1| hypothetical protein LELG_03601 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 461
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%), Gaps = 8/179 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF +P I+++ KN + + PTRELA Q Y+ L+ G
Sbjct: 163 GKDVVGVAETGSGKTFAFGVPAINNIITSKNKDLSVLCISPTRELALQIYDNLEDLTRGT 222
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
+ I G + + + R+ +V++ TP +LV L+ + A++L+++ +L++DE+
Sbjct: 223 DVSCVAIYGGVSKDDQIKKIRNGA--NVVVATPGRLVDLI--NDGAVDLSSINYLVLDEA 278
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + +I + + MF+AT ++V + + + V++ +G R
Sbjct: 279 DRMLE---KGFEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANNFMNQPVKVTIGDR 334
>gi|114682555|ref|XP_001166506.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 5 [Pan
troglodytes]
Length = 796
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 254 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 313
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 314 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 366
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 367 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 422
Query: 221 INV 223
I V
Sbjct: 423 IFV 425
>gi|440472202|gb|ELQ41079.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae Y34]
gi|440478179|gb|ELQ59033.1| ATP-dependent RNA helicase DBP10 [Magnaporthe oryzae P131]
Length = 880
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF+IP+I LR +G RA+I+ P+RELA QT +G
Sbjct: 128 RDVVGMARTGSGKTAAFVIPMIERLRAHSARVGARALIMSPSRELALQTLKVVKEFGKGT 187
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ ++FG + D++I TP + ++L ++M +L+L+++++++ DE+
Sbjct: 188 DLKTVLLVGGDSLEDQFGFMTTNP-DIIIATPGRFLHLKVEM---SLDLSSIKYVVFDEA 243
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I + P+ + +FSAT + ++ R L+
Sbjct: 244 DRLFEM---GFATQLTEILHSLP-PSRQTLLFSATLPRSLVEFARAGLQ 288
>gi|405962641|gb|EKC28298.1| Putative ATP-dependent RNA helicase DDX46 [Crassostrea gigas]
Length = 913
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 104/188 (55%), Gaps = 20/188 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP+ H + P +N G A+I+ PTRELA Q +E +
Sbjct: 287 GRDLIGIAKTGSGKTLAFLIPLFRHIMDQPPLDENDGPIAIIMTPTRELAMQITSECKKF 346
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
++ LGL+A + G +Q AE K G ++++ TP +++ +L + + NL
Sbjct: 347 TKPLGLKAVCVYGGTGISEQIAELKRG------CEIIVCTPGRMIDMLSANNGRVTNLRR 400
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
++++DE+D++F+ GF Q+ I + P+ + MFSAT + R+ L++
Sbjct: 401 CTYVVLDEADRMFDM---GFEPQVTKIVDSIR-PDRQTVMFSATFPRQMEALARKILQKP 456
Query: 219 VQINVGLR 226
+++ VG R
Sbjct: 457 IEVQVGGR 464
>gi|157875861|ref|XP_001686302.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
gi|68129376|emb|CAJ07917.1| putative ATP-dependent RNA helicase [Leishmania major strain
Friedlin]
Length = 803
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 24/163 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ Q L++
Sbjct: 59 GNDVVAMARTGSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILRNGFALNKF 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKF-------DVLITTPNKLVYLLQMDPPALNLANV 159
L LR A ++G G Q+F DV++ TP +L+++ M+ +L+L +V
Sbjct: 119 LDLRFAALVG---------GDSMDQQFELLASNPDVVVATPGRLLHI--MEEASLHLTSV 167
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D+LFE G++ Q+ I + +R +FSAT
Sbjct: 168 RCLVLDEADRLFELGLQP---QIGAIMQKLP-ESCQRALFSAT 206
>gi|442608582|ref|ZP_21023329.1| ATP-dependent RNA helicase SrmB [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441749978|emb|CCQ09391.1| ATP-dependent RNA helicase SrmB [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 408
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGF-RAVIVCPTRELAKQTYNETVRL 104
+GR I A APTG+GKTAAFLIP I L K+ GF R +I+ PTRELA Q + + L
Sbjct: 37 IGRDILASAPTGTGKTAAFLIPAIQYLLDFPRKDPGFARVLIMTPTRELAYQIHEQCQLL 96
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ L+ V+ G I + K + D+LI TP +L+ Q + + NVE LI
Sbjct: 97 AANTHLKIGVVTGGINYGSHK--EIFEKNNDILIATPGRLMEYFQTEN--FHAENVELLI 152
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSAT 202
+DE+D++ + GFR ++ I C +R +FSAT
Sbjct: 153 LDEADRMLDM---GFRKEMLKI---CDEAKNRRQCFLFSAT 187
>gi|388582544|gb|EIM22848.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 459
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 42 ITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGFRAVIVCPTRELAKQT 97
++ L+ +Q A TGSGKT AFLIP+IHSL+ K RA+IV PTREL +Q
Sbjct: 116 MSLLNGRNKQSLLAAETGSGKTFAFLIPLIHSLKSTEGSSKKTKPRAIIVAPTRELCRQL 175
Query: 98 YNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
++ L+ L++ + + GP DV++ +P + LL++D
Sbjct: 176 TSQVKALTHNAKLKSTYVHNAED-----GPFDND--DVIVGSPEQ---LLKLDD---GFE 222
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKW 210
VEWL++DE+D LFE + L G N+ M +AT E +K+
Sbjct: 223 GVEWLVIDEADALFEKDFIASTESLIETIRRVRGNNVNLVMSTATVNEKFSKY 275
>gi|67967779|dbj|BAE00372.1| unnamed protein product [Macaca fascicularis]
Length = 764
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 222 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 281
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 282 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 334
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 335 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 390
Query: 221 INV 223
I V
Sbjct: 391 IFV 393
>gi|73992237|ref|XP_534451.2| PREDICTED: probable ATP-dependent RNA helicase DDX27 isoform 1
[Canis lupus familiaris]
Length = 765
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L + ++ R +++ PTREL Q ++ T +L+
Sbjct: 221 LGKDICACAATGTGKTAAFALPVLERLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLA 280
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 281 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 333
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 334 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 389
Query: 221 INV 223
I V
Sbjct: 390 IFV 392
>gi|335420259|ref|ZP_08551297.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
gi|334894618|gb|EGM32803.1| DEAD box family ATP-dependent RNA helicase [Salinisphaera
shabanensis E1L3A]
Length = 437
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 104/185 (56%), Gaps = 21/185 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A A TG+GKTAAF +P++H L + R +++ PTRELA Q NE+VR
Sbjct: 38 GQDVLAAAQTGTGKTAAFTLPLLHKLGDRQEKKPRVLVLAPTRELAAQV-NESVRTYGKS 96
Query: 109 G-LRAHVI-GKIQQAAEKFGPRSAQ---KFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
G +R+ VI G + + P+ AQ D+++ TP +L+ LLQ +L+N++ L+
Sbjct: 97 GAIRSTVIFGGV-----GYQPQIAQFKKGVDIVVATPGRLLDLLQEG--HADLSNIQTLV 149
Query: 164 VDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ + G + + L + P ++ +FSAT ++D+ K L + V+I
Sbjct: 150 LDEADRMLDMGFIHDIKRVLKYV------PEKRQTLLFSATFSKDIRKLASSLLHKPVEI 203
Query: 222 NVGLR 226
+V R
Sbjct: 204 DVAPR 208
>gi|224593278|ref|NP_060365.7| probable ATP-dependent RNA helicase DDX27 [Homo sapiens]
gi|29427946|sp|Q96GQ7.2|DDX27_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX27; AltName:
Full=DEAD box protein 27
gi|116497013|gb|AAI26288.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|119596072|gb|EAW75666.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, isoform CRA_b [Homo
sapiens]
gi|120660308|gb|AAI30276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|219519028|gb|AAI44126.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sapiens]
gi|313883552|gb|ADR83262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [synthetic construct]
Length = 796
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 254 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 313
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 314 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 366
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 367 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 422
Query: 221 INV 223
I V
Sbjct: 423 IFV 425
>gi|392967075|ref|ZP_10332493.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
gi|387843872|emb|CCH54541.1| DEAD/DEAH box helicase domain protein [Fibrisoma limi BUZ 3]
Length = 421
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 20/183 (10%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
R + CA TG+GKTAAF IPI+ L +GP+ + RA+I+ PTRELA Q
Sbjct: 39 RDLLGCAQTGTGKTAAFAIPILQLLHEDRKQQQGPRRI--RALILTPTRELAIQIGESFA 96
Query: 103 RLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L +R VI G + Q A+ +S DVLI TP +L+ L M+ ++L N++
Sbjct: 97 AYGRHLNVRHTVIFGGVSQHAQVNALKSG--IDVLIATPGRLLDL--MNQGFISLRNIDL 152
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQ 220
++DE+D++ + G D VI P ++ + FSAT DVAK L + V+
Sbjct: 153 FVLDEADRMLDMGF--IHDVKKVIVKL---PTQRQSLFFSATMPPDVAKLADSILNKPVK 207
Query: 221 INV 223
+ V
Sbjct: 208 VEV 210
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 324 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQ 383
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+ETV+ + LG++ ++G Q+ E+ G R Q +V+I TP +L+ L+ LN
Sbjct: 384 IEDETVKFAHYLGIKVVSIVGG--QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 441
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+ + A NLK MF
Sbjct: 442 QCN--YVVLDEADRMIDM---GFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMF 496
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 497 SATMPPAVERLARKYLRNPVVVTIG 521
>gi|331214536|ref|XP_003319949.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298939|gb|EFP75530.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1329
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ ++ + L G A+I+ PTRELA Q Y E
Sbjct: 687 GRDVIGVAKTGSGKTLAFLLPMFRHIKDQRPLDALEGPIAMIMTPTRELATQIYKEGRPF 746
Query: 105 SEGLGLRA----------HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-A 153
+ LGLRA I +++ AE V++ TP +++ LL +
Sbjct: 747 LKSLGLRAACAYGGSPLKDNIADMKRGAE-----------VIVCTPGRMIELLTTNSGRV 795
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRR 213
+N+ V +L++DE+D++F+ GF Q+ I P+ + +FSAT + + R+
Sbjct: 796 INMRRVTYLVLDEADRMFDM---GFEPQVMKIVNQIR-PDRQTVLFSATFPKQMEALARK 851
Query: 214 KLKRRVQINVGLR 226
L+R ++I VG R
Sbjct: 852 ILRRPLEITVGGR 864
>gi|392578929|gb|EIW72056.1| hypothetical protein TREMEDRAFT_41472 [Tremella mesenterica DSM
1558]
Length = 491
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 95/180 (52%), Gaps = 11/180 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKTAAF +PI+ L P+ F A+I+ PTRELA Q + L
Sbjct: 83 GRDVIGLAQTGSGKTAAFSLPILQKLWENPQ--PFFALILAPTRELAYQISQQVTSLGSP 140
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LG+R VI G + ++ +++ V++ TP +L+ L+ + +L NV++L++DE
Sbjct: 141 LGVRTAVIVGGMDMMSQSIA--LSKRPHVIVATPGRLMDHLE-NTKGFSLKNVKFLVMDE 197
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D+L + D++ + L FSAT T VAK R L + V++ V +
Sbjct: 198 ADRLLDMDFGPIIDKILKVIPKERNTYL----FSATMTTKVAKLQRASLNKPVRVEVATK 253
>gi|344257761|gb|EGW13865.1| ATP-dependent RNA helicase DDX54 [Cricetulus griseus]
Length = 861
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 116 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 175
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 176 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLMHVAVEMN---LKLQSVEYVVFDE 231
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 232 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 263
>gi|389748758|gb|EIM89935.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 452
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKTAAF +PII +L PK G A ++ PTRELA Q + L G
Sbjct: 52 GRDIIGVASTGSGKTAAFALPIIQALWNDPK--GLFACVIAPTRELAYQISQQFEALGSG 109
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+R A +IG + ++ A+K +++ TP +L Y L+ + +L +++ ++DE
Sbjct: 110 IGVRCAVIIGGMDVVSQSIA--LAKKPHIIVATPGRLNYHLE-NTKGFSLRGLKFFVLDE 166
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+L + D++ + L FSAT T VAK R L+ V++ V
Sbjct: 167 ADRLLDMDFGPDIDKILKVIPKERTTYL----FSATMTTKVAKLQRASLQNPVRVEV 219
>gi|358386508|gb|EHK24104.1| hypothetical protein TRIVIDRAFT_89504 [Trichoderma virens Gv29-8]
Length = 477
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKT AF +P + S+ G +AV+V PTRELA QT+ + RL+ L
Sbjct: 94 GRDVVGVAETGSGKTMAFALPCVESISLINKKGVKAVVVSPTRELAMQTHEQLARLASQL 153
Query: 109 GLRAHVIGKIQQAAEKFGPRS--AQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
L+ + A K R+ + D+++ TP +L M ++L+ + ++DE
Sbjct: 154 RLKCVC---LYGGASKDDQRALLQKGADIIVATPGRLKDF--MSDETVDLSGCRFAVLDE 208
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ + +GF + + +I AC P +R MF+AT V + V+I +G
Sbjct: 209 ADRMLD---KGFEEDIKMILGACP-PREERQTLMFTATWPMSVQSLASTFMVDPVKITIG 264
Query: 225 LR 226
R
Sbjct: 265 SR 266
>gi|351694739|gb|EHA97657.1| ATP-dependent RNA helicase DDX54 [Heterocephalus glaber]
Length = 876
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L
Sbjct: 133 GKDTVAMARTGSGKTACFLIPMFERLKTRSAQTGARALILSPTRELALQTMKFTKELGRF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLVHVAVEMN---LKLHSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I + G + + +FSAT
Sbjct: 249 ADRLFEM---GFAEQLQEIISRLPGGH-QTVLFSAT 280
>gi|389681720|ref|ZP_10173064.1| putative ATP-dependent RNA helicase [Pseudomonas chlororaphis O6]
gi|388554255|gb|EIM17504.1| putative ATP-dependent RNA helicase [Pseudomonas chlororaphis O6]
Length = 444
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 15/184 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGPK--NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TG+GKTA F +P++ S L GPK + RA+I+ PTRELA+Q + +
Sbjct: 38 GRDLMAAAQTGTGKTAGFALPLLQSLTLEGPKVASNSVRALILVPTRELAEQVHESVRQY 97
Query: 105 SEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E L L + V G + + R D+L+ TP +L+ L + + A+ + ++ L+
Sbjct: 98 AEHLPLSTYAVYGGVSINPQMMKLRKG--IDLLVATPGRLLDLYRQN--AVKFSQLQTLV 153
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQIN 222
+DE+D++ + GF ++L IYAA P ++ +FSAT ++ + + L + I
Sbjct: 154 LDEADRMLDL---GFSEELKDIYAAL--PKKRQTLLFSATFSDAIRLLAGQMLNDPLSIE 208
Query: 223 VGLR 226
V R
Sbjct: 209 VSPR 212
>gi|109091647|ref|XP_001099400.1| PREDICTED: probable ATP-dependent RNA helicase DDX27 [Macaca
mulatta]
gi|355563050|gb|EHH19612.1| Putative ATP-dependent RNA helicase DDX27 [Macaca mulatta]
gi|355784407|gb|EHH65258.1| Putative ATP-dependent RNA helicase DDX27 [Macaca fascicularis]
Length = 763
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 221 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 280
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 281 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 333
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 334 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 389
Query: 221 INV 223
I V
Sbjct: 390 IFV 392
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 106/205 (51%), Gaps = 34/205 (16%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 321 PLGLQQRDVIGIAETGSGKTAAFVLPMLTYISRLPPISEENEAEGPYAVVMAPTRELAQQ 380
Query: 97 TYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
+ETV+ + LG++ ++G Q+ E+ G R Q +V+I TP +L+ L+ LN
Sbjct: 381 IEDETVKFAHYLGIKVVSIVGG--QSIEEQGFRIRQGCEVVIATPGRLIDCLERRYAVLN 438
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + GF Q+ + A NLK MF
Sbjct: 439 QCN--YVVLDEADRMIDM---GFEPQVVGVLDAMPSSNLKPENEDEELDEKKIYRTTYMF 493
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 494 SATMPPAVERLARKYLRNPVVVTIG 518
>gi|159490042|ref|XP_001702998.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270905|gb|EDO96736.1| predicted protein [Chlamydomonas reinhardtii]
Length = 485
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A TGSGKTAAF++P+IH L+ G RAVI+ PTRELA QT+ L +
Sbjct: 47 GLDVVGMARTGSGKTAAFVLPMIHRLKEHSIRAGARAVILSPTRELALQTHKTVRDLCKY 106
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
LR + +F +A DV++ TP +L + L+ + L+L VE+ + DE+
Sbjct: 107 TSLRTACLVGGDSMEVQFAELAANP-DVIVATPGRLAHHLE-EVEGLSLRAVEYCVCDEA 164
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKW 210
D++FE GF Q++ + S P + +FSAT +A++
Sbjct: 165 DRMFEM---GFIAQVSELLRKMS-PGRQTLLFSATMPSTLAEF 203
>gi|1764094|gb|AAB39865.1| ATP-dependent RNA helicase [Leishmania amazonensis]
Length = 855
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ Q L++
Sbjct: 61 GNDVVAMARTGSGKTAAFLIPMLNTLKAHSKIVGIRGLVLSPTRELSLQILRNGFALNKF 120
Query: 108 LGLR-AHVIG--KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A ++G + Q E A D+++ TP +L+++ M+ +L+L +V L++
Sbjct: 121 LDLRFAALVGGDSMDQQFELL----ASNPDIVVATPGRLLHI--MEEASLHLTSVRCLVL 174
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 175 DEADRLFELGL---QPQIGAIMQKLP-ESCQRALFSAT 208
>gi|15422163|gb|AAK95821.1| RNA helicase-like protein [Homo sapiens]
Length = 796
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 104/183 (56%), Gaps = 18/183 (9%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 254 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 313
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + P D+LI TP +L+ L + P+ +L+++E
Sbjct: 314 QFCNITTCLAVGGLDVKSQEAALRAAP------DILIATPGRLIDHLH-NCPSFHLSSIE 366
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 367 VLILDEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVR 422
Query: 221 INV 223
I V
Sbjct: 423 IFV 425
>gi|359792085|ref|ZP_09294909.1| DEAD/DEAH helicase, partial [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251831|gb|EHK55155.1| DEAD/DEAH helicase, partial [Mesorhizobium alhagi CCNWXJ12-2]
Length = 237
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 21/184 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL------RGPKNLGFRAVIVCPTRELAKQTYNETV 102
GR + A A TGSGKTAAF +PI+ + R PK RA+I+ PTRELA Q +
Sbjct: 50 GRDVLAVAQTGSGKTAAFSLPILTKIIALGTKRLPKT--ARALILAPTRELAVQIEDTIR 107
Query: 103 RLSEGLGLR-AHVIGKIQQAAE--KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
L++GL + A V+G + + ++ K P D+L+ TP +L L++ +NL++
Sbjct: 108 VLAKGLHVSTALVLGGVSRYSQVKKMAP----GVDILVATPGRLTDLVREG--EVNLSDT 161
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
WL++DE+D++ + G +L A + + + +FSAT ++ R +K V
Sbjct: 162 RWLVLDEADRMLDMGFIHDVKRL----AKATHKDRQTALFSATMPAEIEGLARGIMKDPV 217
Query: 220 QINV 223
+ V
Sbjct: 218 HVEV 221
>gi|301609527|ref|XP_002934380.1| PREDICTED: ATP-dependent RNA helicase DDX54 [Xenopus (Silurana)
tropicalis]
Length = 847
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 110 GKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKF 169
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L VE+++ DE
Sbjct: 170 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLMHVAIEMN---LKLRTVEYVVFDE 225
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL I + P ++ +FSAT
Sbjct: 226 ADRLFEM---GFAEQLQEIISRL--PETRQTLLFSAT 257
>gi|401428549|ref|XP_003878757.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495006|emb|CBZ30309.1| putative ATP-dependent RNA helicase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 804
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 94/163 (57%), Gaps = 24/163 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++++L+ K +G R +++ PTREL+ Q L++
Sbjct: 59 GNDVVAMARTGSGKTAAFLIPMLNTLKAHSKIVGIRGLVLSPTRELSLQILRNGFALNKF 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKF-------DVLITTPNKLVYLLQMDPPALNLANV 159
L LR A ++G G Q+F D+++ TP +L+++ M+ +L+L +V
Sbjct: 119 LDLRFAALVG---------GDSMDQQFELLASNPDIVVATPGRLLHI--MEEASLHLTSV 167
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
L++DE+D+LFE G+ + Q+ I + +R +FSAT
Sbjct: 168 RCLVLDEADRLFELGL---QPQIGAIMQKLP-ESCQRALFSAT 206
>gi|440295520|gb|ELP88433.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 672
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 11/171 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A A TGSGKTAA+L+PII L G R++++CPTRELA QT L+
Sbjct: 49 GVDVIAMARTGSGKTAAYLVPIIEKLGFHSEDGVRSIVICPTRELALQTVKVFNELTFKT 108
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
LRA +I + E+F + D+++ TP +L ++L+ ++L V+ + DE+D
Sbjct: 109 NLRASLIIGGSKLYEQF-ENLEKNPDIIVATPGRLTFILE--SANISLQRVDIVCFDEAD 165
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKR 217
+FE +GF +Q++ I L R +FSAT + + + ++ LKR
Sbjct: 166 MMFE---QGFSEQISDIVRLLP---LSRQFLLFSATIPQSLGVFLKKTLKR 210
>gi|46580391|ref|YP_011199.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153190|ref|YP_005702126.1| DEAD/DEAH box helicase [Desulfovibrio vulgaris RCH1]
gi|46449808|gb|AAS96458.1| ATP-dependent RNA helicase RhlE [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233634|gb|ADP86488.1| DEAD/DEAH box helicase domain protein [Desulfovibrio vulgaris RCH1]
Length = 462
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 99/178 (55%), Gaps = 13/178 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TG+GKTAAF++P++ L GP+ RA++V PTRELA+QT++ RL
Sbjct: 38 GEDVLALAATGTGKTAAFVLPMLQRLMDGPRG-AVRALVVAPTRELAEQTHDHVRRLGSM 96
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
LR+ I G + A+ R+ +V++ P +L+ ++ L+L+++E L++DE
Sbjct: 97 SRLRSTTIYGGVGVVAQALRLRAG--VEVVVGCPGRLLDHIRRG--NLDLSSLEVLVLDE 152
Query: 167 SDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
D LF+ G + R L ++ A C +R +FSAT + V L++ V + V
Sbjct: 153 GDSLFDLGFLADVRMLLGMVPATC-----QRMLFSATMPDAVRVLAAEALRQPVTVQV 205
>gi|152013480|sp|A5E1W4.2|DBP3_LODEL RecName: Full=ATP-dependent RNA helicase DBP3
Length = 535
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 98/179 (54%), Gaps = 8/179 (4%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF +P I+++ KN + + PTRELA Q Y+ L+ G
Sbjct: 163 GKDVVGVAETGSGKTFAFGVPAINNIITSKNKDLSVLCISPTRELALQIYDNLEDLTRGT 222
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
+ I G + + + R+ +V++ TP +LV L+ + A++L+++ +L++DE+
Sbjct: 223 DVSCVAIYGGVSKDDQIKKIRNGA--NVVVATPGRLVDLI--NDGAVDLSSINYLVLDEA 278
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ E +GF + + +I + + MF+AT ++V + + + V++ +G R
Sbjct: 279 DRMLE---KGFEEDIKLIIGSTPAQGRQTLMFTATWPKEVRELANNFMNQPVKVTIGDR 334
>gi|406863084|gb|EKD16132.1| ATP-dependent RNA helicase DED1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 689
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 101/200 (50%), Gaps = 33/200 (16%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGPKNL------GFR-------AVIVCPTREL 93
GR + ACA TGSGKT FL PI+ L GP + FR ++I+ PTREL
Sbjct: 224 GRDLMACAQTGSGKTGGFLFPILSQAFLTGPSAVPAGASNNFRQRKAYPTSLILAPTREL 283
Query: 94 AKQTYNETVRLSEGLGLRAHV------IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL 147
Q ++E+ + + +R V IG +A E R + D+L+ TP +LV L+
Sbjct: 284 VSQIFDESRKFAYRSWVRPCVVYGGADIGSQLRAME----RDQKCCDLLVATPGRLVDLI 339
Query: 148 QMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP---NLKRGMFSATHT 204
+ ++L N+++L++DE+D++ + GF Q+ I P N + MFSAT
Sbjct: 340 ERG--RISLCNIKYLVLDEADRMLDM---GFEPQIRRIVEGEDMPGVQNRQTLMFSATFP 394
Query: 205 EDVAKWCRRKLKRRVQINVG 224
D+ R LK V ++VG
Sbjct: 395 RDIQMLARDFLKDYVFLSVG 414
>gi|354497513|ref|XP_003510864.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 2 [Cricetulus
griseus]
Length = 875
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLMHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|342180685|emb|CCC90161.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
IL3000]
Length = 842
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 94/158 (59%), Gaps = 14/158 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G + A A TGSGKTAAFLIP++H L+ K +G R +++ PTREL+ Q ++L +
Sbjct: 62 GNDVVAMARTGSGKTAAFLIPMLHMLKTHSKVVGVRGLVLSPTRELSMQILRFGIQLGKF 121
Query: 108 LGLR--AHVIGK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L LR A V G ++Q E A D+++ TP +++++ M+ +L L+ V+ L++
Sbjct: 122 LDLRFVALVGGNSLEQQFEML----ASNPDIVVATPGRILHI--MEEASLQLSMVKCLVL 175
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE G++ Q+ I + +R +FSAT
Sbjct: 176 DEADRLFELGLQP---QIVAIMQKVP-ESCQRALFSAT 209
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 98/190 (51%), Gaps = 32/190 (16%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I A TGSGKTAAF++PI+ L R K R VI+ PTRELA Q YN +V+L+
Sbjct: 340 LGKDIVGSAVTGSGKTAAFIVPILERLLFRPRKVPTSRVVILMPTRELAVQCYNVSVKLA 399
Query: 106 E-----------GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
G LR Q+ K P DV+I TP + + ++ + P+
Sbjct: 400 TFTDVTFCQLVGGFSLRE------QENVLKKRP------DVIIATPGRFIDHMR-NSPSF 446
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRR 213
+ +E L++DE+D++ E GF D+L I P ++ M FSAT T+ + K R
Sbjct: 447 TVDTLEILVLDEADRMLED---GFADELNEILTTI--PKSRQTMLFSATMTDSIDKLIRV 501
Query: 214 KLKRRVQINV 223
+ R V++ V
Sbjct: 502 GMNRPVRLMV 511
>gi|357121829|ref|XP_003562620.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like
[Brachypodium distachyon]
Length = 500
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 9/161 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G + A TGSGKTAAF +PI+H L G G A++V PTRELA Q + L L
Sbjct: 113 GENVLGIAETGSGKTAAFALPILHRL-GEDPFGVAALVVTPTRELAAQLAEQFRALGSPL 171
Query: 109 GLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEWLIVDE 166
GLR IG A+ G +++ V++ TP ++ L+ DP A A ++L++DE
Sbjct: 172 GLRCLAAIGGFDSLAQAKG--LSRRPHVVVATPGRIATLINNDPDLAKVFARTKFLVLDE 229
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
+D++ ++ F + L VI+ C + +FSAT +E++
Sbjct: 230 ADRVIDS---NFEEDLKVIF-DCLPKKRQTFLFSATMSENL 266
>gi|347835985|emb|CCD50557.1| similar to ATP-dependent RNA helicase has1 [Botryotinia fuckeliana]
Length = 510
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT +FLIP ++HSLR P+N G ++V PTRELA Q + +
Sbjct: 71 GRDVLGAAKTGSGKTLSFLIPAVEMLHSLRFKPRN-GTGVIVVSPTRELALQIFGVAREI 129
Query: 105 ----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ G+ V+G + AE + A+ ++LI TP +L+ LQ + N++
Sbjct: 130 MAHHSQTYGI---VMGGANRRAE--AEKLAKGVNLLIATPGRLLDHLQ-NTQGFVFKNLK 183
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
L++DE+D++ EA GF D++ I + + +FSAT T V R L+
Sbjct: 184 ALVIDEADRILEA---GFEDEMKQIVKVLPKDDRQTMLFSATQTTKVEDLARISLR 236
>gi|261204854|ref|XP_002627164.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis SLH14081]
gi|239592223|gb|EEQ74804.1| ATP-dependent RNA helicase ded1 [Ajellomyces dermatitidis SLH14081]
Length = 692
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSL--RGPKNLGFR-----------AVIVCPTRELA 94
GR + ACA TGSGKT FL PI+ SL RGP+ R A+I+ PTREL
Sbjct: 236 GRDLMACAQTGSGKTGGFLFPILSQSLHRRGPEAEATRGLGRQQKAYPTALILGPTRELV 295
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y E + L V+ + + + Q +VL+ TP +LV +++ +
Sbjct: 296 SQIYEEARKFCYRTALHPRVVYGGAEMGNQLR-QLDQGCNVLVATPGRLVDMMERG--RI 352
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRGMFSATHTEDVAKWC 211
+LA++++L++DE+D++ + GF Q+ I P+ + MFSAT D+ K
Sbjct: 353 SLAHIQYLVLDEADRMLDM---GFEPQIRRIVQGSDMPDKHMRQTLMFSATFPPDIQKLA 409
Query: 212 RRKLKRRVQINVG 224
LK + ++VG
Sbjct: 410 EEFLKDHIFLSVG 422
>gi|388856716|emb|CCF49676.1| probable DEAD box protein (putative RNA helicase) [Ustilago hordei]
Length = 556
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 13 TIGFV-ISIIVTTLAVVSNSIFKHFEPHFTITYLSPL-GRQIFACAPTGSGKTAAFLIPI 70
TI F + +I + +N FKH P + L R + A TGSGKTAAF IPI
Sbjct: 108 TIAFSDLGVIPQIVEACTNMGFKHPTPIQVKSIPEALQSRDVIGLAQTGSGKTAAFTIPI 167
Query: 71 IHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPR 128
+ +L PK F A ++ PTRELA Q + L +G+R A ++G + ++
Sbjct: 168 LQALWDNPKP--FFACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQSIA-- 223
Query: 129 SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAA 188
+++ V++ TP +L L+ + +L +++L++DE+D+L + D+L
Sbjct: 224 LSKRPHVIVATPGRLQDHLE-NTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKL-----L 277
Query: 189 CSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINVGLR 226
S P +R M FSAT T VAK R LK V++ V +
Sbjct: 278 QSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEVDTK 316
>gi|385333348|ref|YP_005887299.1| DEAD/DEAH box helicase [Marinobacter adhaerens HP15]
gi|311696498|gb|ADP99371.1| DEAD/DEAH box helicase domain protein [Marinobacter adhaerens HP15]
Length = 440
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPK-NLGFRAVIVCPTRELAKQTYNETVRLSE 106
GR + A A TG+GKTA F +P++ L P+ G RA+I+ PTRELA Q ++ S+
Sbjct: 38 GRDVMAAAQTGTGKTAGFTLPLLQRLGENPRTGKGPRALILTPTRELAAQVHDSVNLYSK 97
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ +A V+ G ++ + R DVL+ TP +L+ L Q + A+ VE L++D
Sbjct: 98 YIPTKAAVVFGGVKINPQMMKLRKG--LDVLVATPGRLMDLYQQN--AVRFNEVEILVLD 153
Query: 166 ESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D++ + G +R R L+++ A NL +FSAT + ++ L VQ+ V
Sbjct: 154 EADRMLDMGFIRDIRKILSLLPAKRQ--NL---LFSATFSNEIRTLAEGLLDNPVQVEVA 208
Query: 225 LR 226
R
Sbjct: 209 AR 210
>gi|281201459|gb|EFA75669.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 751
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRG------------PKNLGFRAVIVCPTRELA 94
GR + ACA TGSGKTAAFL PII L G P+ + RA+++ PTRELA
Sbjct: 322 GRDLMACAQTGSGKTAAFLFPIISGILLDGAPEPLAAYRPGVPRPVHPRALVLAPTRELA 381
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q Y+E + S G + + V+ + + + + D+L+ T +LV LL +
Sbjct: 382 LQIYDEASKFSYGSPVTSVVVYGGAEISHQIAELD-RGCDILVATTGRLVDLLSRG--RV 438
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+LA+V++L++DE+D++ + G Q+ V + + MFSAT + +
Sbjct: 439 SLAHVKYLVLDEADRMLDMGFEPQIRQIVVDNDMPGNRDRQTLMFSATFPKPIQNLASDF 498
Query: 215 LKRRVQINVGL 225
L + + VG+
Sbjct: 499 LNNYIFLKVGV 509
>gi|407973411|ref|ZP_11154323.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
gi|407431252|gb|EKF43924.1| DEAD/DEAH box helicase [Nitratireductor indicus C115]
Length = 473
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 101/186 (54%), Gaps = 25/186 (13%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG------PKNLGFRAVIVCPTRELAKQTYNETV 102
GR + A TGSGKTAAF +PI+ + G P+ RA+I+CPTRELA Q +E V
Sbjct: 47 GRDVLGIAQTGSGKTAAFSLPILSQIIGLGTKRLPRT--ARALILCPTRELAVQ-IDEVV 103
Query: 103 RLSEGLGLRAH-----VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLA 157
R L AH V+G + + ++ R AQ DVLI TP +L +++ L+LA
Sbjct: 104 R---SLAKHAHLATALVLGGVSRGSQVR--RLAQGVDVLIATPGRLTDIVRSG--ELSLA 156
Query: 158 NVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
WL++DE+D++ + GF + + I A + + + +FSAT +++ + LK
Sbjct: 157 ETRWLVLDEADRMLDM---GFINDVRRI-ARATHTDRQTALFSATMPKEIDQLAGSLLKE 212
Query: 218 RVQINV 223
+++ +
Sbjct: 213 PLRVEI 218
>gi|402082038|gb|EJT77183.1| hypothetical protein GGTG_07095 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 685
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 28/197 (14%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGPKNLGFR---------------AVIVCPTR 91
GR + ACA TGSGKT FL PI+ L GP + ++I+ PTR
Sbjct: 229 GRDLMACAQTGSGKTGGFLFPILSQAFLTGPSAIPANQGGGGFGRQRRAFPTSLILAPTR 288
Query: 92 ELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMD 150
ELA Q Y+E + + +R V+ + R ++ D+L+ TP +LV L++
Sbjct: 289 ELASQIYDEARKFAYRSWVRPCVVYGGADIGSQL--RQIERGCDLLVATPGRLVDLIERG 346
Query: 151 PPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDV 207
++L N+++LI+DE+D++ + GF Q+ I PN+ MFSAT E +
Sbjct: 347 --RVSLCNIKYLILDEADRMLDM---GFEPQIRRIVEGEDMPNVNDRQTLMFSATFPEYI 401
Query: 208 AKWCRRKLKRRVQINVG 224
K R LK V ++VG
Sbjct: 402 QKLARDFLKDYVFLSVG 418
>gi|354497511|ref|XP_003510863.1| PREDICTED: ATP-dependent RNA helicase DDX54 isoform 1 [Cricetulus
griseus]
Length = 876
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALH-ENPDIIIATPGRLMHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
+D+LFE GF +QL I G + + +FSAT
Sbjct: 248 ADRLFEM---GFAEQLQEIIGRLPGGH-QTVLFSAT 279
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVTY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL---KRR 218
L+ DE+D++F+ GF Q+ + A+ P + +FSAT + + K R L R
Sbjct: 404 LVFDEADRMFDM---GFEYQVRSV-ASHVRPERQTLLFSATFRKKIEKLARDILIDPIRV 459
Query: 219 VQINVG 224
VQ ++G
Sbjct: 460 VQGDIG 465
>gi|242015175|ref|XP_002428249.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
gi|212512810|gb|EEB15511.1| ATP-dependent RNA helicase DDX54, putative [Pediculus humanus
corporis]
Length = 723
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 92/158 (58%), Gaps = 12/158 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKN-LGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A A TGSGKTA FL+P+ L + PK+ LG RA+I+ PTRELA QT L
Sbjct: 64 GRDVVAMARTGSGKTACFLLPMFEKLINKTPKSRLGVRALILSPTRELALQTVKFIKELG 123
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIV 164
+ L+A I ++FG + D+++ TP + +++ ++M+ L L +VE+++
Sbjct: 124 KFTKLKALAILGGDSMDQQFGA-IHENPDIIVATPGRFLHICVEME---LKLTSVEYVVF 179
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT 202
DE+D+LFE GF +QL I G + + +FSAT
Sbjct: 180 DEADRLFEM---GFGEQLKEILDRL-GVSRQTVLFSAT 213
>gi|120556730|ref|YP_961081.1| DEAD/DEAH box helicase [Marinobacter aquaeolei VT8]
gi|120326579|gb|ABM20894.1| DEAD/DEAH box helicase domain protein [Marinobacter aquaeolei VT8]
Length = 443
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 99/182 (54%), Gaps = 13/182 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKN-LGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TG+GKTA F +P++ L P+ G RA+I+ PTRELA Q ++ S+
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPLLQRLAENPRTGKGPRALILTPTRELAAQVHDSVNLYSK 97
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ +A V+ G ++ + R DVL+ TP +L+ L Q + A+ VE L++D
Sbjct: 98 YVPTKAAVVFGGVKINPQMMKLRKG--LDVLVATPGRLMDLYQQN--AVRFNEVEILVLD 153
Query: 166 ESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
E+D++ + G +R R LA++ A NL +FSAT + ++ + L VQ+ V
Sbjct: 154 EADRMLDMGFIRDIRKILALLPAKRQ--NL---LFSATFSNEIRTLAQGLLDNPVQVEVA 208
Query: 225 LR 226
R
Sbjct: 209 AR 210
>gi|358058122|dbj|GAA96101.1| hypothetical protein E5Q_02762 [Mixia osmundae IAM 14324]
Length = 928
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 17/176 (9%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
R + A TGSGKT A++IP+I L G + G RA+++ PTRELA Q LS G
Sbjct: 142 RDLVGMARTGSGKTLAYMIPLIQRLGGQHSQKFGARALVMVPTRELALQVLKVGKDLSRG 201
Query: 108 LG------LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVE 160
L LR +I E+FG ++ DV+I TP +L++L+ +MD L++++V
Sbjct: 202 LKEGDSETLRWGLIIGGDGLEEQFGLMASNP-DVIIATPGRLLHLIVEMD---LDMSSVA 257
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
+ + DE+D+LFE GF QL I P+ + +FSAT + ++ R L+
Sbjct: 258 YAVFDEADRLFEM---GFATQLHEILHRLP-PSRQTLLFSATLPTSLVEFARAGLQ 309
>gi|296425145|ref|XP_002842103.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638362|emb|CAZ86294.1| unnamed protein product [Tuber melanosporum]
Length = 513
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 11/178 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKTAAF IPI+ +L G A I+ PTRELA Q + L G+
Sbjct: 119 GKDLIGLAETGSGKTAAFAIPILQAL-WDNPTGLFACILAPTRELAFQISEQFEALGGGI 177
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G+R+ VI G + + +K +L+ TP +L+ L+ + +L N+++L++DE+
Sbjct: 178 GVRSAVIVGGMDMMTQSVA--LGKKPHILVATPGRLLDHLE-NTKGFSLRNLKYLVMDEA 234
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVG 224
D+L + D++ + P +R +FSAT T V K R L V+I+VG
Sbjct: 235 DRLLDMDFGPILDKILKVI-----PQTRRTYLFSATMTSKVEKLQRASLSSPVRISVG 287
>gi|406865244|gb|EKD18286.1| putative ATP-dependent RNA helicase dbp10 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1090
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 98/170 (57%), Gaps = 12/170 (7%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I L+ +G RA+I+ P+RELA QT S G
Sbjct: 251 KDVVGMARTGSGKTAAFVIPMIERLKSHSVKVGARAIIMSPSRELALQTLKVVKEFSRGT 310
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L+ ++ E+FG + D++I TP + ++L ++M +L+L++V++++ DE+
Sbjct: 311 DLKCVLLVGGDSLEEQFGFMAGNP-DIVIATPGRFLHLQVEM---SLDLSSVKYVVFDEA 366
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
D+LFE GF QL I A P ++ +FSAT + + ++ R L+
Sbjct: 367 DRLFEM---GFAAQLTEILHAL--PTSRQTLLFSATLPKSLVEFARAGLQ 411
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 81.6 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 100/183 (54%), Gaps = 10/183 (5%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P++ ++ + + G A+I+ PTRELA Q Y E+
Sbjct: 489 GRDVIGIAKTGSGKTIAFLLPLLRHVKDQRPVSGMDGPIALILAPTRELAMQIYKESKPF 548
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEWLI 163
++ + LR Q ++ + ++++ TP +++ LL + + NL + +++
Sbjct: 549 AKVMNLRVTCCVGGQSISDDIAAMK-KGAEIVVCTPGRMIDLLTANNGRVTNLRRITFMV 607
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ GF Q+ I + P+ ++ +FSAT + + R+ L + ++I V
Sbjct: 608 MDEADRMFDM---GFEPQVMKIVNN-TRPDAQKVLFSATFPKTMESLARKILVKPLEITV 663
Query: 224 GLR 226
G R
Sbjct: 664 GGR 666
>gi|18645108|gb|AAL76409.1| ATP-dependent RNA helicase RhlE [uncultured marine proteobacterium]
Length = 446
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 98/186 (52%), Gaps = 20/186 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR + A A TG+GKTA F +P++H L + K RA+++ PTRELA Q
Sbjct: 47 GRDVMAAAQTGTGKTAGFTLPLLHGLSKGQPAKANQVRALVLTPTRELAAQVAESVDIYG 106
Query: 106 EGLGLRAHVI-GKIQQAAEKFGP---RSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L LR+ V+ G + K P R + D+LI TP +L+ L Q + A++ +E
Sbjct: 107 KYLNLRSAVVFGGV-----KINPQMMRLRKGVDILIATPGRLLDLYQQN--AMSFQKLEV 159
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + GF + I A P ++ MFSAT +ED+ + + V+
Sbjct: 160 LILDEADRMLDM---GFIHDIRRIMKAL--PKKRQNLMFSATFSEDIRDLAKTIVNNPVE 214
Query: 221 INVGLR 226
I+V R
Sbjct: 215 ISVTPR 220
>gi|344300784|gb|EGW31105.1| ATP-dependent RNA helicase HAS1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 560
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 18/176 (10%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP ++HSL+ P+N G +I+ PTRELA Q + +L
Sbjct: 133 GRDVLGAAKTGSGKTLAFLIPAIELLHSLKIKPRN-GTAVIIITPTRELALQIFGVARQL 191
Query: 105 ----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
S+ G+ VIG + AE + + ++L+ TP +L+ L+ + P N++
Sbjct: 192 MEHHSQTCGI---VIGGADRRAEAV--KLGKGVNLLVATPGRLLDHLK-NTPGFVFNNLK 245
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
L++DE+D++ E GF D++ I N + +FSAT T V R L+
Sbjct: 246 ALVIDEADRILEI---GFEDEMKQIIKILPNENRQSMLFSATQTTKVEDLARISLR 298
>gi|147898895|ref|NP_001088266.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 [Xenopus laevis]
gi|83318280|gb|AAI08845.1| LOC495097 protein [Xenopus laevis]
Length = 846
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 91/157 (57%), Gaps = 12/157 (7%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G R +I+ PTRELA QT T L +
Sbjct: 112 GKDVVAMARTGSGKTACFLIPMFEKLKAHSAQTGVRGLILSPTRELALQTLKFTKELGKF 171
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F + D++I TP +L+++ ++M+ L L +VE+++ DE
Sbjct: 172 TGLKTALILGGDRMEDQFAALH-ENPDIIIATPGRLMHVAIEMN---LKLRSVEYVVFDE 227
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSAT 202
+D+LFE GF +QL I + P ++ +FSAT
Sbjct: 228 ADRLFEM---GFAEQLQEIISRL--PETRQTLLFSAT 259
>gi|253575100|ref|ZP_04852439.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
gi|251845556|gb|EES73565.1| ATP-dependent RNA helicase DeaD [Paenibacillus sp. oral taxon 786
str. D14]
Length = 410
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 98/186 (52%), Gaps = 24/186 (12%)
Query: 49 GRQIFACAPTGSGKTAAFLIP---IIHSLRGPK--NLGFRAVIVCPTRELAKQTYNETVR 103
G+ + CA TG+GKTAAF IP ++H P+ RA+++ PTRELA Q Y
Sbjct: 38 GQDLLGCAQTGTGKTAAFAIPTLQLLHKDGAPRAGRRNIRALVITPTRELALQIYENFCA 97
Query: 104 LSEGLGLRAHVI-----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
+ L L+ VI K Q+AA + G D+L+ TP +L L+Q ++L N
Sbjct: 98 YGKYLPLKCAVIFGGVSQKPQEAALQKG------VDILVATPGRLNDLMQQK--LIDLKN 149
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKR 217
VE LI+DE+D++ + GF + I A P+ ++ +FSAT + +A+ L+
Sbjct: 150 VELLILDEADRMLDM---GFIHDVKKIIAKT--PSQRQTLLFSATMPDAIAQMADSILRN 204
Query: 218 RVQINV 223
V++ +
Sbjct: 205 PVKVEI 210
>gi|154249323|ref|YP_001410148.1| DEAD/DEAH box helicase domain-containing protein [Fervidobacterium
nodosum Rt17-B1]
gi|154153259|gb|ABS60491.1| DEAD/DEAH box helicase domain protein [Fervidobacterium nodosum
Rt17-B1]
Length = 571
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 44 YLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVR 103
Y + + A A TG+GKTAAF IP++ + N +A+IV PTRELA Q + E
Sbjct: 51 YALSTDKDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKS 110
Query: 104 LSEGLGLRAHVIGKIQ--QAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L G + I + Q+ EK + D+++ TP +++ L D L+L++VE+
Sbjct: 111 LK---GTKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRD--TLDLSHVEY 165
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ + G D L +I +G N + +FSAT +++ R+ +K + +
Sbjct: 166 LVLDEADRMLDMGF--LDDVLEII--KRTGENKRTFLFSATMPKEIVDIARKFMKEYIHV 221
Query: 222 N 222
+
Sbjct: 222 S 222
>gi|363749123|ref|XP_003644779.1| hypothetical protein Ecym_2213 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888412|gb|AET37962.1| Hypothetical protein Ecym_2213 [Eremothecium cymbalariae
DBVPG#7215]
Length = 554
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 100/182 (54%), Gaps = 12/182 (6%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AF +P ++++ N + +I+ PTRELA Q Y+ V L+
Sbjct: 178 GKDVIGVAETGSGKTFAFGVPAVNNIVSSGDASNKNVQCLIISPTRELASQIYDNLVELT 237
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ L + G + + A++ +++Q +++ TP +L+ L+Q +L+ V++L++
Sbjct: 238 NKVSLNCCCLYGGVPKDAQRLQLKNSQ---IVVATPGRLLDLIQEG--YADLSQVQYLVL 292
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++ E +GF + + I + MF+AT ++V + +K V+I++G
Sbjct: 293 DEADRMLE---KGFEEDIKKIIKETDVTRRQTLMFTATWPKEVRELASTFMKHPVKISIG 349
Query: 225 LR 226
R
Sbjct: 350 NR 351
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,332,119,968
Number of Sequences: 23463169
Number of extensions: 130814019
Number of successful extensions: 497967
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3430
Number of HSP's successfully gapped in prelim test: 23626
Number of HSP's that attempted gapping in prelim test: 455735
Number of HSP's gapped (non-prelim): 28871
length of query: 226
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 89
effective length of database: 9,144,741,214
effective search space: 813881968046
effective search space used: 813881968046
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 74 (33.1 bits)