Your job contains 1 sequence.
>psy12977
MKNILTIALGIFTIGFVISIIVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGS
GKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQ
AAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRD
QLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12977
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-060623-1 - symbol:ddx52 "DEAD (Asp-Glu-Ala-... 588 3.6e-57 1
MGI|MGI:1925644 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) bo... 564 1.3e-54 1
UNIPROTKB|A5D7C1 - symbol:DDX52 "Probable ATP-dependent R... 562 2.1e-54 1
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R... 559 4.3e-54 1
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R... 559 4.3e-54 1
RGD|621743 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box pol... 559 4.3e-54 1
UNIPROTKB|F1NQA6 - symbol:DDX52 "Uncharacterized protein"... 558 5.5e-54 1
UNIPROTKB|I3LJA0 - symbol:DDX52 "Uncharacterized protein"... 557 7.0e-54 1
UNIPROTKB|E2RB54 - symbol:DDX52 "Uncharacterized protein"... 555 1.1e-53 1
UNIPROTKB|E1C4M1 - symbol:DDX52 "Uncharacterized protein"... 549 4.9e-53 1
UNIPROTKB|J9P4L6 - symbol:DDX52 "Uncharacterized protein"... 549 4.9e-53 1
FB|FBgn0036754 - symbol:CG5589 species:7227 "Drosophila m... 480 1.0e-45 1
DICTYBASE|DDB_G0274325 - symbol:ddx52 "DEAD/DEAH box heli... 328 8.6e-29 1
POMBASE|SPAC22F3.08c - symbol:rok1 "ATP-dependent RNA hel... 296 7.5e-26 1
TAIR|locus:2075034 - symbol:AT3G09720 species:3702 "Arabi... 284 2.8e-24 1
WB|WBGene00011032 - symbol:R05D11.4 species:6239 "Caenorh... 263 6.7e-22 1
SGD|S000003139 - symbol:ROK1 "RNA-dependent ATPase" speci... 259 1.7e-21 1
WB|WBGene00022148 - symbol:Y71G12B.8 species:6239 "Caenor... 247 6.0e-20 1
UNIPROTKB|F1NTK9 - symbol:DDX54 "Uncharacterized protein"... 246 9.2e-20 1
ZFIN|ZDB-GENE-021220-2 - symbol:ddx54 "DEAD (Asp-Glu-Ala-... 240 4.4e-19 1
CGD|CAL0003464 - symbol:orf19.5991 species:5476 "Candida ... 236 1.3e-18 1
UNIPROTKB|F8VRX4 - symbol:DDX54 "ATP-dependent RNA helica... 223 1.7e-18 1
SGD|S000002189 - symbol:DBP10 "Putative ATP-dependent RNA... 233 3.1e-18 1
WB|WBGene00022378 - symbol:Y94H6A.5 species:6239 "Caenorh... 231 4.1e-18 1
TAIR|locus:2032910 - symbol:RH36 "RNA helicase 36" specie... 208 5.6e-18 2
POMBASE|SPBC17D1.06 - symbol:dbp3 "ATP-dependent RNA heli... 203 7.1e-18 2
UNIPROTKB|Q8TDD1 - symbol:DDX54 "ATP-dependent RNA helica... 228 8.7e-18 1
UNIPROTKB|F1NQV5 - symbol:DDX27 "Uncharacterized protein"... 226 1.1e-17 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 226 1.1e-17 1
MGI|MGI:1919240 - symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) bo... 226 1.4e-17 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 224 1.4e-17 1
UNIPROTKB|E1BGI6 - symbol:DDX54 "Uncharacterized protein"... 226 1.4e-17 1
MGI|MGI:2385884 - symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) bo... 225 1.4e-17 1
RGD|1562539 - symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box po... 226 1.5e-17 1
UNIPROTKB|A1A4H6 - symbol:DDX27 "Probable ATP-dependent R... 223 2.4e-17 1
DICTYBASE|DDB_G0292992 - symbol:helA "putative RNA helica... 225 2.5e-17 1
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 222 3.0e-17 1
UNIPROTKB|F1Q073 - symbol:DDX27 "Uncharacterized protein"... 222 3.1e-17 1
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 219 3.1e-17 1
UNIPROTKB|J9P9C6 - symbol:DDX27 "Uncharacterized protein"... 222 3.2e-17 1
UNIPROTKB|Q96GQ7 - symbol:DDX27 "Probable ATP-dependent R... 222 3.3e-17 1
DICTYBASE|DDB_G0281711 - symbol:ddx27 "DEAD/DEAH box heli... 221 4.1e-17 1
FB|FBgn0032919 - symbol:CG9253 species:7227 "Drosophila m... 217 4.7e-17 1
UNIPROTKB|G5EHR3 - symbol:MGCH7_ch7g509 "ATP-dependent RN... 164 5.1e-17 2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 219 5.2e-17 1
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 218 6.4e-17 1
UNIPROTKB|E1C187 - symbol:DDX27 "Uncharacterized protein"... 217 1.0e-16 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 214 1.2e-16 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 218 1.2e-16 1
POMBASE|SPAC31A2.07c - symbol:dbp10 "ATP-dependent RNA he... 217 1.2e-16 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 217 1.6e-16 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 217 1.6e-16 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 217 1.6e-16 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 217 1.6e-16 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 217 1.6e-16 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 217 1.6e-16 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 217 1.6e-16 1
ZFIN|ZDB-GENE-031030-3 - symbol:ddx49 "DEAD (Asp-Glu-Ala-... 211 1.8e-16 1
ZFIN|ZDB-GENE-031001-8 - symbol:ddx27 "DEAD (Asp-Glu-Ala-... 214 2.3e-16 1
MGI|MGI:2136689 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) bo... 208 4.0e-16 1
UNIPROTKB|I3LQ10 - symbol:LOC100626268 "Uncharacterized p... 210 4.9e-16 1
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 213 5.1e-16 1
CGD|CAL0000864 - symbol:DRS1 species:5476 "Candida albica... 209 5.2e-16 1
UNIPROTKB|Q5ACK7 - symbol:DRS1 "ATP-dependent RNA helicas... 209 5.2e-16 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 212 5.3e-16 1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica... 208 5.7e-16 1
FB|FBgn0052344 - symbol:CG32344 species:7227 "Drosophila ... 210 6.7e-16 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 206 6.8e-16 1
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 209 7.7e-16 1
ASPGD|ASPL0000054300 - symbol:AN0583 species:162425 "Emer... 210 8.0e-16 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 207 9.8e-16 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 207 1.0e-15 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 206 1.1e-15 1
TAIR|locus:2828586 - symbol:AT3G02065 species:3702 "Arabi... 204 1.2e-15 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 208 1.5e-15 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 205 1.9e-15 1
UNIPROTKB|E2QSR5 - symbol:DDX54 "Uncharacterized protein"... 206 2.1e-15 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 204 2.1e-15 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 204 2.1e-15 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 204 2.2e-15 1
UNIPROTKB|E2RBM7 - symbol:DDX49 "Uncharacterized protein"... 201 2.4e-15 1
UNIPROTKB|F1NA53 - symbol:DDX49 "Uncharacterized protein"... 199 2.4e-15 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 206 2.5e-15 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 203 2.7e-15 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 206 3.1e-15 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 199 3.3e-15 1
POMBASE|SPAC823.08c - symbol:SPAC823.08c "ATP-dependent R... 199 3.5e-15 1
UNIPROTKB|F1NYX0 - symbol:DDX49 "Uncharacterized protein"... 199 3.8e-15 1
UNIPROTKB|Q9Y6V7 - symbol:DDX49 "Probable ATP-dependent R... 199 3.9e-15 1
UNIPROTKB|F1S7D9 - symbol:DDX49 "Uncharacterized protein"... 199 3.9e-15 1
DICTYBASE|DDB_G0280147 - symbol:ddx47 "DEAD/DEAH box heli... 200 3.9e-15 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 202 3.9e-15 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 202 4.0e-15 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 202 4.0e-15 1
GENEDB_PFALCIPARUM|PFB0860c - symbol:PFB0860c "RNA helica... 200 4.1e-15 1
UNIPROTKB|O96264 - symbol:PFB0860c "DEAD/DEAH box helicas... 200 4.1e-15 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 198 4.2e-15 1
UNIPROTKB|P25888 - symbol:rhlE "ATP-dependent RNA helicas... 198 4.3e-15 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 198 4.3e-15 1
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 198 4.3e-15 1
WARNING: Descriptions of 635 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 105/177 (59%), Positives = 139/177 (78%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R+I ACAPTGSGKT AF +P++ LR P N GFRA+I+ PTRELA QT+ E ++LSEG+G
Sbjct: 205 REILACAPTGSGKTMAFCLPLLAHLRQPLNKGFRALIISPTRELATQTHRELLKLSEGVG 264
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R H+I K +A +K+GP+SA+KFD+L+TTPN+L+YLL DPPA+NL++VEWL+VDESDK
Sbjct: 265 FRVHMINKGVEAVKKYGPKSAKKFDILVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDK 324
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G GFR+QLA I+ ACS PN++R +FSAT DV +WC+ L V +++G R
Sbjct: 325 LFEDGKTGFREQLATIFLACSSPNVRRVLFSATFATDVERWCKLNLDNLVSVSIGAR 381
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L NVEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFR+QLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFREQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNVVSVSIGAR 380
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 105/178 (58%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V+LSEG
Sbjct: 200 GRELLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQIHRELVKLSEGT 259
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 319
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WCR L + ++VG R
Sbjct: 320 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCRLNLDSVITVSVGAR 377
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 94 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 154 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 213
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 214 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 271
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 101/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E +++SEG
Sbjct: 202 GRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGT 261
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++LA+VEWL+VDESD
Sbjct: 262 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESD 321
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 322 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGAR 379
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 100/178 (56%), Positives = 135/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E +++SEG
Sbjct: 203 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKISEGT 262
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ +PP ++L +VEWL+VDESD
Sbjct: 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ P ++R MFSAT DV +WC+ L V +++G R
Sbjct: 323 KLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYDVEQWCKLNLDNIVSVSIGAR 380
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 102/178 (57%), Positives = 136/178 (76%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IP++ L+ P N GFRA+I+ PTRELA QT+ E V+L++G
Sbjct: 196 GRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRELASQTHRELVKLADGT 255
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K +AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPPA++L +VEWL+VDESD
Sbjct: 256 GFRIHMIQKASEAAKKFGPKSSRKFDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESD 315
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R FSAT DV +WC+ L V ++VG R
Sbjct: 316 KLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVSVGAR 373
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+++ PTRELA Q + E V++SEG
Sbjct: 110 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELVKISEGT 169
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 170 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 229
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ +KR MFSAT DV +WC+ L + +++G R
Sbjct: 230 KLFEDGKTGFRDQLASIFLACTSHKVKRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 287
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 101/178 (56%), Positives = 134/178 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 204 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 263
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 264 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 323
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSAT DV +WC+ L + +++G R
Sbjct: 324 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVITVSIGAR 381
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 102/179 (56%), Positives = 136/179 (75%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IP++ L+ P N GFRA+I+ PTRELA QT+ E V+L++G
Sbjct: 196 GRELLASAPTGSGKTLAFCIPLLTHLKQPMNKGFRALIISPTRELASQTHRELVKLADGT 255
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKF-DVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G R H+I K +AA+KFGP+S++KF D+L+TTPN+L+YLL+ DPPA++L +VEWL+VDES
Sbjct: 256 GFRIHMIQKASEAAKKFGPKSSRKFVDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDES 315
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
DKLFE G GFRDQLA I+ AC+ ++R FSAT DV +WC+ L V ++VG R
Sbjct: 316 DKLFEDGKSGFRDQLASIFLACTSHVVRRAFFSATFAHDVEEWCKLNLDSIVLVSVGAR 374
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 100/178 (56%), Positives = 133/178 (74%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR++ A APTGSGKT AF IPI+ L+ P N GFRA+I+ PTRELA Q + E V++SEG
Sbjct: 201 GRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPTRELANQIHRELVKISEGT 260
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
G R H+I K AA+KFGP+S++KFD+L+TTPN+L+YLL+ DPP ++L +VEWL+VDESD
Sbjct: 261 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 320
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
KLFE G GFRDQLA I+ AC+ ++R MFSA DV +WC+ L + +++G R
Sbjct: 321 KLFEDGKTGFRDQLASIFLACTSHKVRRAMFSAIFAYDVEQWCKLNLDNVITVSIGAR 378
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 89/177 (50%), Positives = 122/177 (68%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT AFL PII+ LR K G RA+++ PTRELA+Q Y E L+ G
Sbjct: 157 RALMACAPTGSGKTLAFLTPIINGLRAHKTTGLRALVLAPTRELAQQIYRECAELTRETG 216
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
LR H I K+ +A +K G Q++D+L++TPN++ +LLQ +PP L+L++VEW ++DE+D+
Sbjct: 217 LRTHFISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADR 276
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
L E G F++QL IYAACS P FSAT+T VAKW R LK V+I +G++
Sbjct: 277 LMEEGQNNFKEQLDDIYAACSNPTKCVAFFSATYTVPVAKWALRHLKNLVRITIGVQ 333
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 328 (120.5 bits), Expect = 8.6e-29, P = 8.6e-29
Identities = 73/175 (41%), Positives = 109/175 (62%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R++ A APTGSGKTA+F IPI+ +L PK GFR+VI+ PTRELA+Q Y LS+G
Sbjct: 237 REVVAIAPTGSGKTASFSIPILQALYEPKKEGFRSVIIAPTRELAQQIYRNFRLLSKGKP 296
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
R V+ K + + +D+LITTP +LVYL++ + L+L VE+L+ DE+DK
Sbjct: 297 FRICVLSK-NLHNQSTNENLIKNYDILITTPLRLVYLIKEN--LLSLNKVEYLVFDEADK 353
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
LF+ + F++Q+ ++ AC P LK +FSAT + V + +K ++I +G
Sbjct: 354 LFD---KNFQEQVDIVVTACQNPKLKICLFSATMNQQVEELGHSIMKNPIKIIIG 405
>POMBASE|SPAC22F3.08c [details] [associations]
symbol:rok1 "ATP-dependent RNA helicase Rok1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
NextBio:20802875 Uniprot:Q09775
Length = 481
Score = 296 (109.3 bits), Expect = 7.5e-26, P = 7.5e-26
Identities = 67/177 (37%), Positives = 104/177 (58%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLG 109
R + ACAPTGSGKT A+L PI+ L+ G+RA+IV PTREL +Q Y + +LS G
Sbjct: 84 RDLLACAPTGSGKTIAYLFPILQKLQLHVPGGYRAIIVAPTRELCEQIYRQAEKLSFGTS 143
Query: 110 LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDK 169
L+ + K + ++ P+ +K+D+ I TP +LV +Q L+ VE+ ++DE+D+
Sbjct: 144 LKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQT---GLSFEKVEFFVMDEADR 200
Query: 170 LFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
LFE G F +Q I +AC+ N+ + +FSAT V + + ++I VGL+
Sbjct: 201 LFEPG---FIEQTDHILSACTSSNICKSLFSATIPSRVEELAKVVTVDPIRIIVGLK 254
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 284 (105.0 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 69/176 (39%), Positives = 101/176 (57%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR+ FACAPTGSGKT AF+ P++ L+ P G RAVI+ P RELA QT E +L +G
Sbjct: 178 GRECFACAPTGSGKTFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGS 237
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
++ K F S DVLI+TP +L ++ ++L+ VE+L++DESD
Sbjct: 238 NFHIRLMTKPLVKTADF---SKLWCDVLISTPMRLKRAIKAKK--IDLSKVEYLVLDESD 292
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
KLFE + Q+ + ACS P++ R +FSAT + V + R + V++ +G
Sbjct: 293 KLFE---QSLLKQIDCVVKACSNPSIIRSLFSATLPDSVEELARSIMHDAVRVIIG 345
>WB|WBGene00011032 [details] [associations]
symbol:R05D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG EMBL:Z75546 PIR:T23922 RefSeq:NP_492326.1
ProteinModelPortal:Q21736 SMR:Q21736 STRING:Q21736 PaxDb:Q21736
EnsemblMetazoa:R05D11.4.1 EnsemblMetazoa:R05D11.4.2 GeneID:172651
KEGG:cel:CELE_R05D11.4 UCSC:R05D11.4 CTD:172651 WormBase:R05D11.4
InParanoid:Q21736 NextBio:876429 Uniprot:Q21736
Length = 581
Score = 263 (97.6 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 69/190 (36%), Positives = 100/190 (52%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG---------FRAVIVCPTRELAKQTYNE 100
R + A APTGSGKT AF +P+I + K AV++ PTRELA QTY E
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTE 223
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
++ + A + E+ Q D+L++TPN++V+ L ++ +++
Sbjct: 224 FLKYCANTSISA-----ANFSGEE---TDIQHADILVSTPNRIVFHLDK----IDTSSLR 271
Query: 161 WLIVDESDKLFEAGVRG----FRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
WL+VDESD+LFE V G FR+QLA IY AC + FSAT + +V KWC+ +
Sbjct: 272 WLVVDESDRLFEV-VEGQDKCFRNQLAAIYKACDAKCTRVAFFSATFSHEVEKWCKENID 330
Query: 217 RRVQINVGLR 226
+ VG R
Sbjct: 331 EIGMVCVGER 340
>SGD|S000003139 [details] [associations]
symbol:ROK1 "RNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
Length = 564
Score = 259 (96.2 bits), Expect = 1.7e-21, P = 1.7e-21
Identities = 63/182 (34%), Positives = 108/182 (59%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-GFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + AC PTGSGKT AFLIP++ + K G + +I+ PT+ELA Q + E +LS +
Sbjct: 160 RDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSYKI 219
Query: 109 GLRAHVIGKIQQAAEKFGPR------SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
L ++ ++ G + S +K+D++I+TP +L+ +++ + AL+L+ V+ L
Sbjct: 220 FLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNE--ALDLSKVKHL 277
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
I DE+DKLF+ + F +Q I +AC P+L++ MFSAT +V + + + V++
Sbjct: 278 IFDEADKLFD---KTFVEQSDDILSACREPSLRKAMFSATIPSNVEEIAQSIMMDPVRVI 334
Query: 223 VG 224
+G
Sbjct: 335 IG 336
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 247 (92.0 bits), Expect = 6.0e-20, P = 6.0e-20
Identities = 65/180 (36%), Positives = 104/180 (57%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLSE 106
G+ I ACA TG+GKTAAF++PI+ + PK R +++ PTRELA Q + +LS
Sbjct: 185 GKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLST 244
Query: 107 GLGLRAHVIG-----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ L + K Q+AA + GP DV++ TP +L+ L + P+ NL+N+E
Sbjct: 245 FIQLEVCLCAGGLDLKAQEAALRSGP------DVVVATPGRLIDHLH-NSPSFNLSNIEV 297
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ E FRDQ+ + C+ N + +FSAT TE++ + L++ V+I
Sbjct: 298 LVLDEADRMLE---EAFRDQMNELIRLCA-QNRQTLLFSATMTEEIDELASMSLQKPVKI 353
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 246 (91.7 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 67/177 (37%), Positives = 103/177 (58%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A A TGSGKTA FL+P+ L+ P G RA+I+ PTRELA QT T L +
Sbjct: 73 GRDVVAMARTGSGKTACFLLPMFERLKAPSPSGARALILSPTRELALQTLKFTKELGKFT 132
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ A V+G + ++F D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 133 GLKTALVLGG-DKMEDQFAALHENP-DIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 187
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I A G + + +FSAT + + ++ R L + I +
Sbjct: 188 ADRLFEMG---FAEQLQEILARLPGSH-QTVLFSATLPKLLVEFARAGLTEPMLIRL 240
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 240 (89.5 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 65/177 (36%), Positives = 100/177 (56%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTAAFL+P+ L+ P+ G RA+I+ PTRELA QT T L +
Sbjct: 115 GKDVVAMARTGSGKTAAFLVPLFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKF 174
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GLR +I ++F D++I TP +L++++Q L L +VE+++ DE+
Sbjct: 175 TGLRTALILGGDSMDDQFAALHENP-DIIIGTPGRLMHVIQ--EMNLKLQSVEYVVFDEA 231
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
D+LFE G F +QL I P+ ++ + FSAT + + ++ R L V I +
Sbjct: 232 DRLFEMG---FAEQLQEIIRRL--PDARQTLLFSATLPKLIVEFARAGLTEPVLIRL 283
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 236 (88.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 60/176 (34%), Positives = 98/176 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKTAAF++P+I L+ + G RAVI+ P+RELA QTY + S G
Sbjct: 136 GRDVVGMARTGSGKTAAFVLPLIERLKSRQPGGVRAVILSPSRELALQTYKQVKEFSHGT 195
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ V+ E F + K D+++ TP + ++L ++M +L V++++ DE+
Sbjct: 196 NLQSIVLIGGDSLEEDFS-KMMTKPDIIVCTPGRFLHLKVEMQ---YDLMTVQYIVFDEA 251
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
D+LFE G F +QL + A+ N + +FSAT + + + L V + +
Sbjct: 252 DRLFEMG---FAEQLNELLASLPS-NRQSLLFSATLPRSLVDFAKAGLTNPVLVRL 303
>UNIPROTKB|F8VRX4 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC089999 HGNC:HGNC:20084 ChiTaRS:DDX54 IPI:IPI01022245
ProteinModelPortal:F8VRX4 SMR:F8VRX4 Ensembl:ENST00000552375
ArrayExpress:F8VRX4 Bgee:F8VRX4 Uniprot:F8VRX4
Length = 208
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 61/166 (36%), Positives = 96/166 (57%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 50 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 109
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 110 TGLKTALILGGDRMEDQFAALHENP-DIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 165
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+D+LFE G F +QL I A G + + +FSAT + + ++ R
Sbjct: 166 ADRLFEMG---FAEQLQEIIARLPGGH-QTVLFSATLPKLLVEFAR 207
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 233 (87.1 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 62/177 (35%), Positives = 102/177 (57%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R I A TGSGKTAAF++P++ L+ +G RAVI+ P+RELA QT+N + G
Sbjct: 175 RDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGARAVILSPSRELAMQTFNVFKDFARGT 234
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
LR+ ++ E+FG DV+I TP + ++L ++M+ L+L +VE+++ DE+
Sbjct: 235 ELRSVLLTGGDSLEEQFGMMMTNP-DVIIATPGRFLHLKVEMN---LDLKSVEYVVFDEA 290
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
D+LFE G F++QL + A+ P ++ + FSAT + + + L V + +
Sbjct: 291 DRLFEMG---FQEQLNELLASL--PTTRQTLLFSATLPNSLVDFVKAGLVNPVLVRL 342
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 231 (86.4 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 56/136 (41%), Positives = 85/136 (62%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A + TGSGKTAAF+IP++ L+ G RA++V PTRELA QT+ L
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFT 120
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVEWLIVDE 166
GLR A ++G Q E+F D+L+ TP +L++++ +MD L L+ V++++ DE
Sbjct: 121 GLRCACLVGG-DQIEEQFSTIHENP-DILLATPGRLLHVIVEMD---LRLSYVQYVVFDE 175
Query: 167 SDKLFEAGVRGFRDQL 182
+D+LFE G F+DQL
Sbjct: 176 ADRLFEMG---FQDQL 188
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 208 (78.3 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 57/162 (35%), Positives = 89/162 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKTAAF +PI+H L G A++V PTRELA Q + L L
Sbjct: 95 GRDVLGLAQTGSGKTAAFALPILHRL-AEDPYGVFALVVTPTRELAFQLAEQFKALGSCL 153
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP--PALNLANVEWLIVD 165
LR VI G + + S ++ITTP ++ LL+ +P P + + ++L++D
Sbjct: 154 NLRCSVIVGGMDMLTQTMSLVSRPH--IVITTPGRIKVLLENNPDVPPV-FSRTKFLVLD 210
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
E+D++ + G F+D+L I+ C + + +FSAT T ++
Sbjct: 211 EADRVLDVG---FQDELRTIFQ-CLPKSRQTLLFSATMTSNL 248
Score = 39 (18.8 bits), Expect = 5.6e-18, Sum P(2) = 5.6e-18
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 205 EDVAKWCRRKLKRRVQINVGL 225
ED K RRKLKR+ + GL
Sbjct: 459 EDKVK-DRRKLKRKTLADKGL 478
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 203 (76.5 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 63/182 (34%), Positives = 94/182 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGF-RAVIVCPTRELAKQTYNETVRLSE 106
GR + A TGSGKT AF IP + L G N R ++V PTRELA QTY L +
Sbjct: 202 GRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSLIQ 261
Query: 107 GLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G L+A V+ +E+ R+A+ V+I TP +L+ L+ + +++ + V +L++DE
Sbjct: 262 GTNLKAVVVYGGAPKSEQ--ARAAKNASVIIGTPGRLLDLI--NDGSIDCSQVGYLVLDE 317
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGP--NLKRG--MFSATHTEDVAKWCRRKLKRRVQIN 222
+D++ + G F + I + P N R FSAT E V LK V+I
Sbjct: 318 ADRMLDTG---FEQDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKIT 374
Query: 223 VG 224
+G
Sbjct: 375 IG 376
Score = 46 (21.3 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 21 IVTTLAVVSNSIFKHFEPHFTITYL 45
+VTTL + ++F H FT+T+L
Sbjct: 21 LVTTLISLKENVFLHI---FTLTFL 42
>UNIPROTKB|Q8TDD1 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006396
"RNA processing" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 GO:GO:0030520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
EMBL:AF478457 EMBL:AC089999 EMBL:AY148094 EMBL:BC005848
IPI:IPI00152510 IPI:IPI00879999 RefSeq:NP_001104792.1
RefSeq:NP_076977.3 UniGene:Hs.506861 ProteinModelPortal:Q8TDD1
SMR:Q8TDD1 IntAct:Q8TDD1 STRING:Q8TDD1 PhosphoSite:Q8TDD1
DMDM:46576615 SWISS-2DPAGE:Q8TDD1 PaxDb:Q8TDD1 PRIDE:Q8TDD1
DNASU:79039 Ensembl:ENST00000306014 Ensembl:ENST00000314045
GeneID:79039 KEGG:hsa:79039 UCSC:uc001tup.3 UCSC:uc001tuq.4
CTD:79039 GeneCards:GC12M113595 HGNC:HGNC:20084 HPA:HPA028244
MIM:611665 neXtProt:NX_Q8TDD1 PharmGKB:PA134992026
HOVERGEN:HBG051333 InParanoid:Q8TDD1 ChiTaRS:DDX54 GenomeRNAi:79039
NextBio:67773 ArrayExpress:Q8TDD1 Bgee:Q8TDD1 CleanEx:HS_DDX54
Genevestigator:Q8TDD1 GermOnline:ENSG00000123064 Uniprot:Q8TDD1
Length = 881
Score = 228 (85.3 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 64/177 (36%), Positives = 100/177 (56%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F D++I TP +LV++ ++M +L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDRMEDQFAALHENP-DIIIATPGRLVHVAVEM---SLKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I A G + + +FSAT + + ++ R L V I +
Sbjct: 249 ADRLFEMG---FAEQLQEIIARLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 301
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 216 LGKDICACAATGTGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLA 275
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + GP D+LI TP +L+ L + P+ +L++VE
Sbjct: 276 QFSSVTTCLAVGGLDVKTQEAALRSGP------DILIATPGRLIDHLH-NCPSFHLSSVE 328
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V LK +
Sbjct: 329 VLILDEADRMLD---EYFEEQMKEIIRLCSR-HRQTMLFSATMTEEVKDLASVSLKNPTR 384
Query: 221 INV 223
I V
Sbjct: 385 IFV 387
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 61/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF++P I+H + P ++ G VI PTRELA Q + E +
Sbjct: 265 GRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKF 324
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
S+ GLR + E+F A ++++ TP +L+ +L+M AL + +L++
Sbjct: 325 SKAYGLRVSAVYGGMSKHEQFKELKAG-CEIVVATPGRLIDMLKMK--ALTMMRASYLVL 381
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D++F+ G F Q+ I P+ + +FSAT V K R L +++ VG
Sbjct: 382 DEADRMFDLG---FEPQVRSIVGQIR-PDRQTLLFSATMPWKVEKLAREILSDPIRVTVG 437
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 226 (84.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALHENP-DIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I G + + +FSAT + + ++ R L V I +
Sbjct: 248 ADRLFEMG---FAEQLQEIIGRLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 300
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 224 (83.9 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 70/194 (36%), Positives = 101/194 (52%)
Query: 39 HFTITYLSPLGRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELA 94
H TI L GR + A A TGSGKT AFLIP +I+ L+ P+N G +++ PTRELA
Sbjct: 189 HKTIRPLLE-GRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRN-GTGVIVLSPTRELA 246
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPP 152
QTY L E + H G I + + + A ++L+ TP +L+ LQ + P
Sbjct: 247 MQTYGV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLDHLQ-NTP 302
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWC 211
N++ LI+DE+D++ E G F ++L I P ++ M FSAT T V
Sbjct: 303 GFMFKNLQCLIIDEADRILEVG---FEEELKQIIKLL--PKKRQSMLFSATQTRKVEDLA 357
Query: 212 RRKLKRRVQINVGL 225
R LK+ + VG+
Sbjct: 358 RISLKKE-PLYVGV 370
>UNIPROTKB|E1BGI6 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030331 "estrogen receptor binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0003723 GO:GO:0006396 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:DAAA02045421
IPI:IPI00690851 Ensembl:ENSBTAT00000029525 Uniprot:E1BGI6
Length = 877
Score = 226 (84.6 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 64/177 (36%), Positives = 99/177 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 193 TGLKTALILGGDKMEDQFAALHENP-DIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 248
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I G + + +FSAT + + ++ R L V I +
Sbjct: 249 ADRLFEMG---FAEQLQEIIGRLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 301
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 225 (84.3 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 220 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLA 279
Query: 106 EGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E LI+
Sbjct: 280 QFCSITTCLAVGGLDVKSQEAALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEVLIL 336
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I V
Sbjct: 337 DEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRIFV 391
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 226 (84.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FL+P+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 132 GKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKF 191
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GL+ +I + ++F D++I TP +LV++ ++M+ L L +VE+++ DE
Sbjct: 192 TGLKTALILGGDKMEDQFAALHENP-DIIIATPGRLVHVAVEMN---LKLQSVEYVVFDE 247
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I G + + +FSAT + + ++ R L V I +
Sbjct: 248 ADRLFEMG---FAEQLQEIIGRLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 300
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 223 (83.6 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 282
Query: 106 EGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E LI+
Sbjct: 283 QFCSITTCLAVGGLDVKSQEAALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEVLIL 339
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I V
Sbjct: 340 DEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRIFV 394
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 225 (84.3 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/177 (36%), Positives = 97/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEG 107
G I A TGSGKT AF+IP+I L +G RAVI+ PTRELA QT+ S+G
Sbjct: 267 GHDIVGMARTGSGKTGAFVIPMIQKLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQG 326
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY-LLQMDPPALNLANVEWLIVDE 166
LR +I ++F A+ D++I TP +L++ LL+ ++L+ V++++ DE
Sbjct: 327 TQLRTILIVGGDSMEDQFTDL-ARNPDIIIATPGRLMHHLLET---GMSLSKVQYIVFDE 382
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL I + S N + +FSAT + + R L IN+
Sbjct: 383 ADRLFEMG---FNEQLTEILSKLS-ENRQTLLFSATLPSLLVDFVRAGLNNPKLINL 435
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 222 (83.2 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 62/183 (33%), Positives = 103/183 (56%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGF-RAVIVCPTRELAKQTYNETV 102
L+ LG+ I A TGSGKTAAF++PI+ L PK + R +I+CPTRELA Q ++
Sbjct: 292 LALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVAT 351
Query: 103 RLSEGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+++ + + IG + ++ R ++ D++I TP + + ++ + + N+E
Sbjct: 352 KIASFTDIMVCLCIGGLSLKLQEQELR--KRPDIVIATPGRFIDHMR-NSQGFTVENIEI 408
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQ 220
+++DE+D++ E G F D+L I AC P ++ M FSAT T+ V R L R V+
Sbjct: 409 MVMDEADRMLEDG---FADELNEIIQAC--PKSRQTMLFSATMTDKVDDLIRLSLNRPVR 463
Query: 221 INV 223
+ V
Sbjct: 464 VFV 466
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 222 (83.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 223 LGKDICACAATGTGKTAAFALPVLERLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLA 282
Query: 106 EGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E LI+
Sbjct: 283 QFCNITTCLAVGGLDVKSQEAALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEVLIL 339
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I V
Sbjct: 340 DEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRIFV 394
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 219 (82.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 51/178 (28%), Positives = 100/178 (56%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I H + K G + +++ PTRELA Q Y+ + L++
Sbjct: 149 GKDVVGVAETGSGKTFAFGVPAISHLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDK 208
Query: 108 LGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V G + + ++ + +Q V++ TP +L+ LLQ +++L+ V +L++DE
Sbjct: 209 VGMQCCCVYGGVPKDEQRIQLKKSQ---VVVATPGRLLDLLQEG--SVDLSQVNYLVLDE 263
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++ E +GF + + I + MF+AT ++V + + +++++G
Sbjct: 264 ADRMLE---KGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVSIG 318
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 222 (83.2 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 244 LGKDICACAATGTGKTAAFALPVLERLIYKPRQSPVTRVLVLVPTRELGIQVHSVTKQLA 303
Query: 106 EGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E LI+
Sbjct: 304 QFCNITTCLAVGGLDVKSQEAALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEVLIL 360
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I V
Sbjct: 361 DEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRIFV 415
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 222 (83.2 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 60/179 (33%), Positives = 104/179 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 254 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLA 313
Query: 106 EGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ + + +G + +++ R+A D+LI TP +L+ L + P+ +L+++E LI+
Sbjct: 314 QFCNITTCLAVGGLDVKSQEAALRAAP--DILIATPGRLIDHLH-NCPSFHLSSIEVLIL 370
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+I V
Sbjct: 371 DEADRMLD---EYFEEQMKEIIRMCSH-HRQTMLFSATMTDEVKDLASVSLKNPVRIFV 425
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 221 (82.9 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 58/178 (32%), Positives = 102/178 (57%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
G+ I A A TGSGKTAAFL+P++ L R + R +I+ PTRELA Q + L++
Sbjct: 227 GKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQ 286
Query: 107 GLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+ + ++G + A++ R + DV+I TP +L+ L ++ + L ++E LI+D
Sbjct: 287 FSNITSCLIVGGLSNKAQEVELRKSP--DVVIATPGRLIDHL-LNAHGIGLDDLEILILD 343
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
E+D+L + G F+D++ I +C N + +FSAT ++V + L++ +++ V
Sbjct: 344 EADRLLDMG---FKDEINKIVESCP-TNRQTMLFSATLNDEVKTLAKLSLQQPIRVQV 397
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 217 (81.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 59/178 (33%), Positives = 99/178 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +PI+H+L P+ + A+++ PTRELA Q + L G
Sbjct: 98 GKDVIGLAETGSGKTGAFALPILHALLENPQR--YFALVLTPTRELAFQIGEQFEALGSG 155
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V+ G + A+ G + A+K ++I TP +LV L+ + NL +++L++DE
Sbjct: 156 IGIKCCVVVGGMDMVAQ--GLQLAKKPHIIIATPGRLVDHLE-NMKGFNLKAIKYLVMDE 212
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + P +R +FSAT T+ V K R LK V++ V
Sbjct: 213 ADRILNMDFEVELDKILKVL-----PRERRTFLFSATMTKKVKKLQRASLKDPVKVEV 265
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 164 (62.8 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 48/155 (30%), Positives = 73/155 (47%)
Query: 74 LRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI---GKIQQAAEKFGPRSA 130
+ GP VIVCPTRELA Q +NE +L LR V+ G + G
Sbjct: 205 IHGPVRAEPLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGC- 263
Query: 131 QKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACS 190
D+L TP +L++ + P LNL V ++++DE+D++ A D ++ A +
Sbjct: 264 ---DILCATPGRLLHFMDK-PELLNLQRVRYVVIDEADEMLTADWE--EDMKKIMSAGGA 317
Query: 191 GPNLKRGMFSATHTEDVAKWCRRKLKR-RVQINVG 224
+K +FSAT + + R L VQ+ VG
Sbjct: 318 AQEIKYLLFSATFPKKIRDLAREHLSEDHVQLRVG 352
Score = 88 (36.0 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG 76
G + A TGSGKTAAFLIP+I+ L G
Sbjct: 159 GHDVIGIAQTGSGKTAAFLIPVINKLMG 186
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 219 (82.2 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 65/194 (33%), Positives = 100/194 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS--LRGP-----KNLGFRA-------VIVCPTRELA 94
GR + ACA TGSGKT FL P++ ++GP N F + +++ PTREL
Sbjct: 223 GRDLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELV 282
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPA 153
Q Y E+ + S +RA V+ ++ R+ + D+L+ TP +L LL D
Sbjct: 283 SQIYEESKKFSYRSWVRACVVYGGADIGQQM--RNMDRGCDLLVATPGRLKDLL--DRGK 338
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKW 210
++LAN+ +L++DE+D++ + G F Q+ I C P +K MFSAT D+
Sbjct: 339 VSLANIRYLVLDEADRMLDMG---FEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQML 395
Query: 211 CRRKLKRRVQINVG 224
R LK V ++VG
Sbjct: 396 ARDFLKDYVFLSVG 409
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 218 (81.8 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 73/213 (34%), Positives = 109/213 (51%)
Query: 24 TLAVVSNSIFKHFEP--HFTITYLSPLGRQIFACAPTGSGKTAAFLIP---IIHSLRG-P 77
TL +S+ F H H +I L GR I A A TGSGKT AFLIP +I+ L+ P
Sbjct: 177 TLKGISDMGFTHMTEIQHKSIKPLLE-GRDILAAAKTGSGKTLAFLIPAVELIYKLKFMP 235
Query: 78 KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF---- 133
+N G +I+ PTRELA QTY L E + H G I + + AQK
Sbjct: 236 RN-GTGVIILSPTRELAMQTYGV---LKELMNHHVHTYGLIMGGSNRSA--EAQKLGNGI 289
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
++++ TP +L+ +Q + P N++ L++DE+D++ E G F +++ I P
Sbjct: 290 NIIVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILEVG---FEEEMKQIIKLL--PK 343
Query: 194 LKRGM-FSATHTEDVAKWCRRKLKRRVQINVGL 225
++ M FSAT T V + LK+ + VG+
Sbjct: 344 RRQTMLFSATQTRKVEDLAKISLKKE-PLYVGV 375
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 217 (81.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 65/184 (35%), Positives = 105/184 (57%)
Query: 48 LGRQIFACAPTGS-GKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRL 104
LG+ I ACA TG+ GKTAAF++P++ L P+ R +++ PTREL Q ++ T +L
Sbjct: 216 LGKDICACAATGTVGKTAAFILPVLERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQL 275
Query: 105 SEGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
++ + + +G K Q+AA + GP D+LI TP +L+ L + P+ +L++V
Sbjct: 276 AQFSSVTTCLAVGGLDVKTQEAALRSGP------DILIATPGRLIDHLH-NCPSFHLSSV 328
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
E LI+DE+D++ + F +Q+ I CS + + +FSAT TE+V LK
Sbjct: 329 EVLILDEADRMLD---EYFEEQMKEIIRLCSR-HRQTMLFSATMTEEVKDLASVSLKNPT 384
Query: 220 QINV 223
+I V
Sbjct: 385 RIFV 388
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 214 (80.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 64/187 (34%), Positives = 102/187 (54%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRGPKNLGFRAVIVCPTRELAKQTYN 99
+ PL G+ + A A TGSGKT AFL+P ++H L ++ G +IV PTREL+ QTY
Sbjct: 99 IDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYG 158
Query: 100 ETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLAN 158
L EG L V+G ++AEK + A+ +L+ TP +L+ LQ L + N
Sbjct: 159 VLSELLEGSNLTYGLVMGGSNRSAEK--DKLAKGVSILVATPGRLLDHLQNTDNFL-VRN 215
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKR 217
++ LI+DE+D++ + G F ++ + P ++ M FSATH+ V + + L
Sbjct: 216 MKCLIIDEADRILDIG---FEIEMQQVLRHL--PKQRQSMLFSATHSPKVDELVKLALHS 270
Query: 218 R-VQINV 223
V+++V
Sbjct: 271 NPVRVSV 277
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 218 (81.8 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/185 (34%), Positives = 102/185 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L P+ G AVI+ PTRELA QTY E +
Sbjct: 341 GRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Query: 105 SEGLGLRAHV----IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
++ LGL+ +G +Q A+ R A+ +++ TP +++ +L + + NL V
Sbjct: 401 AKPLGLKVACTYGGVGISEQIADL--KRGAE---IVVCTPGRMIDVLAANSGKVTNLRRV 455
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++F+ +GF Q+ + P+ + +FSAT + R+ L + V
Sbjct: 456 TYLVLDEADRMFD---KGFEPQIMKVVNNIR-PDKQTVLFSATFPRHMEALARKVLDKPV 511
Query: 220 QINVG 224
+I VG
Sbjct: 512 EILVG 516
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 63/179 (35%), Positives = 100/179 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKTAAF+IP+I L+ N RA+I+ P RELA QT S+G
Sbjct: 106 GRDVVGMARTGSGKTAAFVIPMIEHLKSTLANSNTRALILSPNRELALQTVKVVKDFSKG 165
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVD 165
LR+ ++G + E+F S K D+++ TP + ++L ++M L L+++E+++ D
Sbjct: 166 TDLRSVAIVGGVS-LEEQFSLLSG-KPDIVVATPGRFLHLKVEMK---LELSSIEYVVFD 220
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
E+D+LFE G F QL I A P ++ + FSAT + + + L+ V + +
Sbjct: 221 EADRLFEMG---FAAQLTEILHAL--PTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRL 274
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 217 (81.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 71/213 (33%), Positives = 111/213 (52%)
Query: 28 VSNSIFKH-FEPHFTI-TYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-- 80
+ NS+ KH +E I T P GR + A TGSGKT AFL+P+ + ++L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 81 --GFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVI----GKIQQAAEKFGPRSAQKFD 134
G AVI+ PTRELA Q E + S+ LGLR + G +Q AE R A+
Sbjct: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL--KRGAE--- 497
Query: 135 VLITTPNKLVYLLQMDPPAL-NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN 193
+++ TP +++ +L + + NL V ++++DE+D++F+ G F Q+ I P+
Sbjct: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNVR-PD 553
Query: 194 LKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+ MFSAT + RR L + +++ VG R
Sbjct: 554 RQTVMFSATFPRAMEALARRILSKPIEVQVGGR 586
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 211 (79.3 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/159 (34%), Positives = 87/159 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++P++ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCMGCAKTGSGKTAAFVLPVLQKL-SEDPYGVFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVDE 166
GL+ ++G + + G ++K V++ TP +L ++ D +NL +++LI+DE
Sbjct: 98 GLKDCIIVGGMDMVTQ--GLELSKKPHVVVATPGRLADHIRSSD--TINLNRIQFLIMDE 153
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
+D+L E G F L VI +A + +FSAT T+
Sbjct: 154 ADRLLEQGCTDFTKDLEVILSAVPAKR-QTLLFSATLTD 191
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 214 (80.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 63/183 (34%), Positives = 102/183 (55%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF++P++ L P+ R +++ PTREL Q + +L+
Sbjct: 237 LGKDICACAATGTGKTAAFMLPVLERLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLA 296
Query: 106 EGLGLRAHV-IG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + + +G K Q+AA + GP DVLI TP +L+ L + P+ L+ +E
Sbjct: 297 QFTTISTCLAVGGLDLKSQEAALRAGP------DVLIATPGRLIDHLH-NTPSFELSQIE 349
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I C+ + +FSAT +E+V LK+ V+
Sbjct: 350 ILILDEADRMLD---EYFEEQMKEIIRMCAYQR-QTMLFSATMSEEVKDLASVSLKQPVR 405
Query: 221 INV 223
I V
Sbjct: 406 IFV 408
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 208 (78.3 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 55/158 (34%), Positives = 84/158 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ ++G + A+ ++K V+I TP +L L+ N+ +++L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFNMKKIQFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L I AA + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTTDLETILAAVPARR-QTLLFSATLTD 191
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 210 (79.0 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 60/183 (32%), Positives = 102/183 (55%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
LG+ I ACA TG+GKTAAF +P++ L P+ R +++ PTREL Q ++ T +L+
Sbjct: 247 LGKDICACAATGTGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLA 306
Query: 106 EG-----LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ + G + +++ R+A D+LI TP +L+ L + P+ +L+++E
Sbjct: 307 QSSLCVITTISGLFAGGLDVKSQEAALRAAXP-DILIATPGRLIDHLH-NCPSFHLSSIE 364
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D++ + F +Q+ I CS + + +FSAT T++V LK V+
Sbjct: 365 VLILDEADRMLD---EYFEEQMKEIIRMCS-LHRQTMLFSATMTDEVKDLASVSLKNPVR 420
Query: 221 INV 223
I V
Sbjct: 421 IFV 423
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 213 (80.0 bits), Expect = 5.1e-16, P = 5.1e-16
Identities = 68/187 (36%), Positives = 103/187 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNL---GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ H L PK+ G A+I+ PTRELA Q + E +
Sbjct: 546 GRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKF 605
Query: 105 SEGLGLR-AHVIGKI---QQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR A V G +Q AE R A D+++ TP +++ +L + + NL V
Sbjct: 606 SKVLGLRTACVYGGASISEQIAEL--KRGA---DIVVCTPGRMIDILCANNRRITNLRRV 660
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++F+ G F Q+ I + P+ + MFSAT V ++ L + +
Sbjct: 661 TFLVLDEADRMFDMG---FGPQINCIVDSIR-PDRQTIMFSATFPPKVENVAKKILNKPL 716
Query: 220 QINVGLR 226
+I G R
Sbjct: 717 EIIAGGR 723
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 209 (78.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 60/182 (32%), Positives = 100/182 (54%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKT A++IPII L + + +I+ PTRELA Q Y +LS
Sbjct: 166 LGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHH 225
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L + V G ++Q E+ R D++I TP +L+ ++ + P+ ++ +++ L+
Sbjct: 226 VNNLNIGLAVGGLNLRQQEEQLKTRP----DIVIATPGRLIDHIR-NSPSFSVQDIQVLV 280
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+D+L I + P KR +FSAT + + L++ V+I
Sbjct: 281 IDEADRMLE---EGFQDELTEILSLI--PKHKRQTLLFSATMNTRIQDLIQLSLQKPVRI 335
Query: 222 NV 223
+
Sbjct: 336 MI 337
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 209 (78.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 60/182 (32%), Positives = 100/182 (54%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE- 106
LG+ I A A TGSGKT A++IPII L + + +I+ PTRELA Q Y +LS
Sbjct: 166 LGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHH 225
Query: 107 --GLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
L + V G ++Q E+ R D++I TP +L+ ++ + P+ ++ +++ L+
Sbjct: 226 VNNLNIGLAVGGLNLRQQEEQLKTRP----DIVIATPGRLIDHIR-NSPSFSVQDIQVLV 280
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQI 221
+DE+D++ E GF+D+L I + P KR +FSAT + + L++ V+I
Sbjct: 281 IDEADRMLE---EGFQDELTEILSLI--PKHKRQTLLFSATMNTRIQDLIQLSLQKPVRI 335
Query: 222 NV 223
+
Sbjct: 336 MI 337
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 212 (79.7 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 64/186 (34%), Positives = 102/186 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A A TGSGKTA F+ P I H + P K G A+ + PTRELA Q Y ET++
Sbjct: 342 GRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYLETLKY 401
Query: 105 SEGLGLRAHV----IGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
S+ L+ V + K QQ E K G ++++ TP +L+ ++++ LN V
Sbjct: 402 SKYFKLKTTVLYGGVSKQQQCKELKAG------CEIIVATPGRLIDMIKLKATKLN--RV 453
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+DK+F+ G F Q+ I P+ + +FSAT +V ++ R L +
Sbjct: 454 SYLVLDEADKMFDFG---FGPQVLSIVNHVR-PDRQTLLFSATFKPNVEEFARTILSDPI 509
Query: 220 QINVGL 225
+I++G+
Sbjct: 510 KISIGM 515
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 208 (78.3 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 55/180 (30%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVI-VCPTRELAKQTYNETVRLSEG 107
G+ + A TGSGKT AF +P I+++ N +V+ + PTRELA Q Y+ + L+
Sbjct: 190 GKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLSVLCISPTRELALQIYDNLIELTAD 249
Query: 108 LGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
G+ V G + + + R + +V++ TP +LV L+ + A+NL V +L++DE
Sbjct: 250 SGVNCVAVYGGVSKDDQI---RKIKTANVVVATPGRLVDLI--NDGAINLGKVNYLVLDE 304
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVGLR 226
+D++ E +GF + + I + S + MF+AT ++V + + V++ VG R
Sbjct: 305 ADRMLE---KGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVTVGDR 361
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 210 (79.0 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 63/178 (35%), Positives = 97/178 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A A TGSGKTA FLIP+ L R G RA+I+ PTRELA QTY L
Sbjct: 76 GRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRF 135
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
+ L++ ++ +F DV++ TP + ++L ++MD L L ++E+++ DE
Sbjct: 136 MELKSILVLGGDSMDSQFSAIHTCP-DVIVATPGRFLHLCVEMD---LKLNSIEYVVFDE 191
Query: 167 SDKLFEAGVRGFRDQL-AVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LFE G F +QL ++ S + + MFSAT + + ++ R L V I +
Sbjct: 192 ADRLFEMG---FGEQLNETLHRLPS--SRQTVMFSATLPKLLVEFARAGLNDPVLIRL 244
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 206 (77.6 bits), Expect = 6.8e-16, P = 6.8e-16
Identities = 59/180 (32%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A TGSGKT AF IP++ SL F +++ PTRELA Q + L G+
Sbjct: 81 GKDVIGLAETGSGKTGAFAIPVLQSLLDHPQ-AFFCLVLTPTRELAFQIGQQFEALGSGI 139
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL A VI G + AA+ A++ +++ TP +LV L+ + NL +++LI+DE+
Sbjct: 140 GLIAAVIVGGVDMAAQAMA--LARRPHIIVATPGRLVDHLE-NTKGFNLKALKFLIMDEA 196
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINVGLR 226
D++ D++ + P +R +FSAT T+ V+K R L+ +++V R
Sbjct: 197 DRILNMDFEVELDKILKVI-----PRERRTYLFSATMTKKVSKLERASLRDPARVSVSSR 251
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 209 (78.6 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 57/170 (33%), Positives = 87/170 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL---GFRAVIVCPTRELAKQTYNETVRLS 105
G + A A TGSGKT AFL+P+I L K G A+I+ PTRELA Q Y ++
Sbjct: 78 GHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIG 137
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
A ++ I KF + ++LI TP +++ L LN +N++ L++D
Sbjct: 138 SHTSFSAGLV--IGGKDVKFELERISRINILIGTPGRILQHLDQ-AVGLNTSNLQMLVLD 194
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKL 215
E+D+ + G F+ L I + S P+ + +FSAT ++ VA R L
Sbjct: 195 EADRCLDMG---FKKTLDAIVSTLS-PSRQTLLFSATQSQSVADLARLSL 240
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 210 (79.0 bits), Expect = 8.0e-16, P = 8.0e-16
Identities = 56/170 (32%), Positives = 98/170 (57%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKN-LGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ + A TGSGKTAAF+IP+I L+ G R +I+ P+RELA QT L +G
Sbjct: 129 QDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGKGT 188
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDES 167
L++ ++ E+FG + D++I TP + ++L ++M+ L+L+++++++ DE+
Sbjct: 189 DLKSVLLVGGDSLEEQFGMMAGNP-DIVIATPGRFLHLKVEMN---LDLSSIKYVVFDEA 244
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
D+LFE G F QL I P+ ++ + FSAT + + ++ R L+
Sbjct: 245 DRLFEMG---FAAQLTEILHGL--PSTRQTLLFSATLPKSLVEFARAGLQ 289
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 207 (77.9 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 69/211 (32%), Positives = 105/211 (49%)
Query: 24 TLAVVSNSIFKHFEP--HFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIH---SLRG-P 77
TL + FKH H +I L GR + A A TGSGKT AFLIP+I L+ P
Sbjct: 182 TLKAIEEMGFKHMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMP 240
Query: 78 KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDV 135
+N G +I+ PTRELA QT+ L E + H G I + + + ++
Sbjct: 241 RN-GTGVLILSPTRELAMQTFGV---LKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINI 296
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
++ TP +L+ +Q + P N++ L++DE+D++ + G F ++L I P +
Sbjct: 297 VVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILDVG---FEEELKQIIKLL--PARR 350
Query: 196 RGM-FSATHTEDVAKWCRRKLKRRVQINVGL 225
+ M FSAT T V R LK+ + VG+
Sbjct: 351 QTMLFSATQTRKVEDLARISLKKE-PLYVGV 380
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 207 (77.9 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 69/211 (32%), Positives = 105/211 (49%)
Query: 24 TLAVVSNSIFKHFEP--HFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIH---SLRG-P 77
TL + FKH H +I L GR + A A TGSGKT AFLIP+I L+ P
Sbjct: 194 TLKAIEEMGFKHMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMP 252
Query: 78 KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDV 135
+N G +I+ PTRELA QT+ L E + H G I + + + ++
Sbjct: 253 RN-GTGVLILSPTRELAMQTFGV---LKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINI 308
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
++ TP +L+ +Q + P N++ L++DE+D++ + G F ++L I P +
Sbjct: 309 VVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILDVG---FEEELKQIIKLL--PARR 362
Query: 196 RGM-FSATHTEDVAKWCRRKLKRRVQINVGL 225
+ M FSAT T V R LK+ + VG+
Sbjct: 363 QTMLFSATQTRKVEDLARISLKKE-PLYVGV 392
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 206 (77.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 67/193 (34%), Positives = 97/193 (50%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A TGSGKT AFLIP I L P+N G ++V PTRELA Q +
Sbjct: 159 IPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKPRN-GTGVIVVSPTRELALQIF 217
Query: 99 NETVRL----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
L S+ G+ VIG + AE + + ++LI TP +L+ LQ + P
Sbjct: 218 GVARELLTAHSQTYGI---VIGGANRRAE--AEKLTKGVNLLIATPGRLLDHLQ-NTPGF 271
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
N++ L++DE+D++ E G F D++ I + + +FSAT T V R
Sbjct: 272 VFKNLKTLVIDEADRILEVG---FEDEMRQIIKILPNEDRQTMLFSATQTTKVEDLARIS 328
Query: 215 LKRR-VQINVGLR 226
L+ + INV R
Sbjct: 329 LRPGPLYINVDHR 341
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/184 (33%), Positives = 98/184 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII------HSLR-GPKNLGFRAVIVCPTRELAKQTYNET 101
G+ + A A TGSGKTA+FL+PII HS + A+++ PTREL Q ++
Sbjct: 147 GKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQA 206
Query: 102 VRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
L +GL + A V+G + + + R Q +++I TP ++V LL + L N+
Sbjct: 207 KMLGKGLPFKTALVVGGDPMSGQLY--RIQQGVELIIGTPGRVVDLLSKH--TIELDNIM 262
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
++DE D + + RGFRDQ+ I+ A S P + +FSAT + +V K K +
Sbjct: 263 TFVLDEVDCMLQ---RGFRDQVMQIFQALSQPQVL--LFSATISREVEKVGGSLAKEIIL 317
Query: 221 INVG 224
+++G
Sbjct: 318 VSIG 321
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 208 (78.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 63/187 (33%), Positives = 99/187 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + + L G AVI+ PTRELA Q E +
Sbjct: 408 GRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKF 467
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 468 SKTLGLRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANNGRVTNLRRV 522
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ G F Q+ I P+ + MFSAT + RR L + +
Sbjct: 523 TYVVLDEADRMFDMG---FEPQVMRIVDNVR-PDRQTVMFSATFPRAMEALARRILSKPI 578
Query: 220 QINVGLR 226
++ VG R
Sbjct: 579 EVQVGGR 585
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 205 (77.2 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 67/205 (32%), Positives = 105/205 (51%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSL-RGP------KNLGFRAVIVCPTRELAKQ 96
PLG R + A TGSGKTAAF++P++ + R P + G AV++ PTRELA+Q
Sbjct: 345 PLGLQQRDVIGIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQ 404
Query: 97 TYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
ETV+ + LG R ++G Q+ E+ G + Q +++I TP +L+ L+ LN
Sbjct: 405 IEEETVKFAHYLGFRVTSIVGG--QSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLN 462
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG----------------MF 199
N ++++DE+D++ + G F Q+A + A NLK MF
Sbjct: 463 QCN--YVVLDEADRMIDMG---FEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMF 517
Query: 200 SATHTEDVAKWCRRKLKRRVQINVG 224
SAT V + R+ L+ V + +G
Sbjct: 518 SATMPPGVERLARKYLRNPVVVTIG 542
>UNIPROTKB|E2QSR5 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
Ensembl:ENSCAFT00000014352 Uniprot:E2QSR5
Length = 912
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 65/177 (36%), Positives = 95/177 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK-NLGFRAVIVCPTRELAKQTYNETVRLSEG 107
G+ + A A TGSGKTA FLIP+ L+ G RA+I+ PTRELA QT T L +
Sbjct: 133 GKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELALQTMKFTKELGKF 192
Query: 108 LGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYL-LQMDPPALNLANVEWLIVDE 166
GLR +I + ++F D++I TP +LV++ ++M+ L L +VE+ VD
Sbjct: 193 TGLRTALILGGDKMEDQFAALHENP-DIIIATPGRLVHVAVEMN---LKLQSVEY--VDS 246
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
D LFE G F +QL I G + + +FSAT + + ++ R L V I +
Sbjct: 247 IDWLFEMG---FAEQLQEIIGRLPGGH-QTVLFSATLPKLLVEFARAGLTEPVLIRL 299
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 204 (76.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 65/190 (34%), Positives = 99/190 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I LR P+N G +I+ PTRELA QT+
Sbjct: 207 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRN-GTGVLILSPTRELAMQTF 265
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G I + + + A ++++ TP +L+ +Q + P
Sbjct: 266 GV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQ-NTPGFMY 321
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R L
Sbjct: 322 KNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARISL 376
Query: 216 KRRVQINVGL 225
K+ + VG+
Sbjct: 377 KKE-PLYVGV 385
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 204 (76.9 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 65/190 (34%), Positives = 99/190 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I LR P+N G +I+ PTRELA QT+
Sbjct: 211 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRN-GTGVLILSPTRELAMQTF 269
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G I + + + A ++++ TP +L+ +Q + P
Sbjct: 270 GV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQ-NTPGFMY 325
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R L
Sbjct: 326 KNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARISL 380
Query: 216 KRRVQINVGL 225
K+ + VG+
Sbjct: 381 KKE-PLYVGV 389
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 204 (76.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 65/190 (34%), Positives = 99/190 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I LR P+N G +I+ PTRELA QT+
Sbjct: 236 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRN-GTGVLILSPTRELAMQTF 294
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G I + + + A ++++ TP +L+ +Q + P
Sbjct: 295 GV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQ-NTPGFMY 350
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R L
Sbjct: 351 KNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARISL 405
Query: 216 KRRVQINVGL 225
K+ + VG+
Sbjct: 406 KKE-PLYVGV 414
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 201 (75.8 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 55/159 (34%), Positives = 85/159 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ ++G + A+ ++K V+I TP +L L+ ++ + +L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFSIKKIRFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTE 205
D+L E G F L I AA P ++ + FSAT T+
Sbjct: 155 DRLLEQGCTDFTVDLEAILAAV--PTRRQTLLFSATLTD 191
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 199 (75.1 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 55/158 (34%), Positives = 84/158 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++P++ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPVLQVL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ V+G + A+ ++K V+I TP +L L+ +L +++L++DE+
Sbjct: 98 GLKDCVVVGGLDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFSLKKLKFLVLDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L VI A + +FSAT T+
Sbjct: 155 DRLLEQGCADFTADLEVILEAVPARR-QTLLFSATLTD 191
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 62/187 (33%), Positives = 98/187 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ + + +G AVI+ PTRELA Q E +
Sbjct: 394 GRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKF 453
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ L LR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 454 SKSLALRVVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLGANNGRVTNLRRV 508
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ G F Q+ I P+ + MFSAT + RR L + V
Sbjct: 509 TYVVIDEADRMFDMG---FEPQVMRIVDNVR-PDRQTVMFSATFPRTMEALARRILSKPV 564
Query: 220 QINVGLR 226
++ VG R
Sbjct: 565 EVQVGGR 571
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 203 (76.5 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 67/192 (34%), Positives = 100/192 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I LR P+N G +I+ PTRELA QT+
Sbjct: 210 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRN-GTGVLILSPTRELAMQTF 268
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPAL 154
L E + H G I + + AQK ++++ TP +L+ +Q + P
Sbjct: 269 GV---LKELMTHHVHTYGLIMGGSNRSA--EAQKLGNGINIIVATPGRLLDHMQ-NTPGF 322
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRR 213
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R
Sbjct: 323 MYKNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARI 377
Query: 214 KLKRRVQINVGL 225
LK+ + VG+
Sbjct: 378 SLKKE-PLYVGV 388
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 206 (77.6 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 62/187 (33%), Positives = 99/187 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLRGPK---NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF++P+ H L P G A+I+ PTREL Q + +
Sbjct: 547 GRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKF 606
Query: 105 SEGLGLRAHVI----GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
S+ LGLR + G +Q AE R A+ +++ TP +++ +L + + NL V
Sbjct: 607 SKSLGLRPVCVYGGTGISEQIAEL--KRGAE---IIVCTPGRMIDMLAANSGRVTNLRRV 661
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ G F Q+ I P+ + MFSAT + RR LK+ +
Sbjct: 662 TYVVLDEADRMFDMG---FEPQVMRIIDNVR-PDRQTVMFSATFPRQMEALARRILKKPI 717
Query: 220 QINVGLR 226
++ VG R
Sbjct: 718 EVIVGGR 724
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 199 (75.1 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 59/177 (33%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 118
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+++ VI G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 119 IGVQSAVIVGGIDSMSQSLA--LAKKPHIIIATPGRLIDHLE-NTKGFNLRALKYLVMDE 175
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 176 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 228
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 199 (75.1 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 60/177 (33%), Positives = 95/177 (53%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
R + A TGSGKTAAF +P+I L P F AV++ PTRELA Q + + +
Sbjct: 84 RDVIGLAQTGSGKTAAFALPVIQELWNNPSP--FFAVVLAPTRELAYQISEQFEAIGGSI 141
Query: 109 GLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G+R+ VI G + + ++K VL+ TP +L+ L+ + +L N+++LI+DE+
Sbjct: 142 GVRSVVIVGGMDMVTQAVA--LSKKPHVLVCTPGRLMDHLE-NTKGFSLKNLKYLIMDEA 198
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
D+L + D++ I P+ +R + FSAT T V K R L + V++ V
Sbjct: 199 DRLLDMDFGPIIDKILKII-----PHERRTLLFSATMTSKVEKLQRASLHQPVRVAV 250
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 199 (75.1 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 55/158 (34%), Positives = 84/158 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++P++ L G +++ PTRELA Q + L + L
Sbjct: 42 GRDCLGCAKTGSGKTAAFVLPVLQVL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 100
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ V+G + A+ ++K V+I TP +L L+ +L +++L++DE+
Sbjct: 101 GLKDCVVVGGLDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFSLKKLKFLVLDEA 157
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L VI A + +FSAT T+
Sbjct: 158 DRLLEQGCADFTADLEVILEAVPARR-QTLLFSATLTD 194
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 54/158 (34%), Positives = 83/158 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ ++G + A+ ++K V+I TP +L L+ ++ + +L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFSIKKIRFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L I AA + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTVDLEAILAAVPARR-QTLLFSATLTD 191
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 199 (75.1 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 54/158 (34%), Positives = 83/158 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ ++G + A+ ++K V+I TP +L L+ ++ + +L++DE+
Sbjct: 98 GLKDCIIVGGMDMVAQAL--ELSRKPHVVIATPGRLADHLRSSN-TFSIKKIRFLVMDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L I AA + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTVDLEAILAAVPARR-QTLLFSATLTD 191
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 200 (75.5 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 59/178 (33%), Positives = 97/178 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKTAAF+IP++ L P+ L F + + PTRELA Q ++ +
Sbjct: 156 GRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGL-F-CLALAPTRELAYQIADQFNAIGST 213
Query: 108 LGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ V +G I ++ A+K V++ +P ++++ L+ NL ++++ I+DE
Sbjct: 214 IGVKTCVLVGGIDSMSQSLA--LAKKPHVVVGSPGRVLHHLE-HTKGFNLRSIKYFIMDE 270
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
+D+LF A F +++ I P + +FSAT T VAK R L V++ V
Sbjct: 271 ADRLFSAD---FEEEVNNILKVI--PKERNTYLFSATMTSKVAKLQRASLVNPVKVQV 323
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 202 (76.2 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ L +G ++ F+ A+IV PTREL Q Y +
Sbjct: 323 GRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLD 382
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +R VI Q + ++ ++L TP +L+ +++ + + L +
Sbjct: 383 ARKFSYGTCVRPVVIYGGTQMFHSL-KQISEGCNILCATPGRLLDVIRKEK--IGLTKLR 439
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G FR+ + + + P+ + MFSAT + R LK
Sbjct: 440 YLVLDEADRMLDMG---FREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILK 495
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 202 (76.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 62/180 (34%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 327 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 386
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 387 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDVIGKEK--IGLRQVK 443
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 444 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAGEFLK 499
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 202 (76.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 62/180 (34%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 327 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 386
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 387 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDVIGKEK--IGLRQVK 443
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 444 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAGEFLK 499
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 200 (75.5 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 58/177 (32%), Positives = 92/177 (51%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
L + I + TGSGKTA F+IPI+ L+ K F A+++ PTREL Q L
Sbjct: 192 LKKDIIGLSETGSGKTACFIIPILQDLKVNKQ-SFYALVISPTRELCIQISQNFQALGMN 250
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
L + I G + + A+K +V+++TP +++ L + NL N+++L+ DE
Sbjct: 251 LLINICTIYGGVDIVTQSLN--LAKKPNVIVSTPGRILDHLN-NTKGFNLKNLKYLVFDE 307
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DKL ++L +I PN +FSAT T++VAK + LK V++ V
Sbjct: 308 ADKLLSQDFESSINKLLLILP----PNRITFLFSATMTKNVAKLKKACLKNPVKVEV 360
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 200 (75.5 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 58/177 (32%), Positives = 92/177 (51%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
L + I + TGSGKTA F+IPI+ L+ K F A+++ PTREL Q L
Sbjct: 192 LKKDIIGLSETGSGKTACFIIPILQDLKVNKQ-SFYALVISPTRELCIQISQNFQALGMN 250
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
L + I G + + A+K +V+++TP +++ L + NL N+++L+ DE
Sbjct: 251 LLINICTIYGGVDIVTQSLN--LAKKPNVIVSTPGRILDHLN-NTKGFNLKNLKYLVFDE 307
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DKL ++L +I PN +FSAT T++VAK + LK V++ V
Sbjct: 308 ADKLLSQDFESSINKLLLILP----PNRITFLFSATMTKNVAKLKKACLKNPVKVEV 360
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 198 (74.8 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 60/177 (33%), Positives = 94/177 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+ +L P+ L F A+++ PTRELA Q + L
Sbjct: 62 GRDIIGLAETGSGKTGAFALPILQALLDAPQRL-F-ALVLTPTRELAFQISEQFEALGSS 119
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+ + VI G I ++ A+K ++I TP +LV L+ + NL +++L++DE
Sbjct: 120 IGVHSAVIVGGIDSMSQSLA--LAKKPHIIIATPGRLVDHLE-NTKGFNLRALKFLVMDE 176
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 177 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKQVQKLQRAALKNPVKCAV 229
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 65/186 (34%), Positives = 98/186 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLG---FRAVIVCPTRELAKQTYNETVR 103
GR + A A TG+GKTA F +P++ L R P G RA+I+ PTRELA Q E VR
Sbjct: 38 GRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQI-GENVR 96
Query: 104 -LSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
S+ L +R+ V+ G + + R DVL+ TP +L+ L + A+ L VE
Sbjct: 97 DYSKYLNIRSLVVFGGVSINPQMMKLRGG--VDVLVATPGRLLDLEHQN--AVKLDQVEI 152
Query: 162 LIVDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
L++DE+D++ + G + R L + A NL +FSAT ++D+ + L ++
Sbjct: 153 LVLDEADRMLDMGFIHDIRRVLTKLPA--KRQNL---LFSATFSDDIKALAEKLLHNPLE 207
Query: 221 INVGLR 226
I V R
Sbjct: 208 IEVARR 213
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 58/177 (32%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ A ++G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 119 IGVQCAVIVGGIDSMSQSLA--LAKKPHIVIATPGRLIDHLE-NTKGFNLRALKYLVMDE 175
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 176 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 228
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 58/177 (32%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 61 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 118
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ A ++G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 119 IGVQCAVIVGGIDSMSQSLA--LAKKPHIVIATPGRLIDHLE-NTKGFNLRALKYLVMDE 175
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 176 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 228
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 58/177 (32%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 60 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 117
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ A ++G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 118 IGVQCAVIVGGIDSMSQSLA--LAKKPHIVIATPGRLIDHLE-NTKGFNLRALKYLVMDE 174
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 175 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 227
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 59/184 (32%), Positives = 100/184 (54%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGF-RAVIVCPTRELAKQTYNETV 102
L+ +G+ I ACA TG+GKTAAF +P++ L P + RA+++ PTRELA Q
Sbjct: 34 LALVGKDIMACAQTGTGKTAAFALPVLEQLAAKPADKPLLRALVMTPTRELAIQVCANIQ 93
Query: 103 RLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVE 160
+ S+ L L+ V G ++ G Q D+L+ TP +L ++ Q + L+L++V
Sbjct: 94 KYSQFLPLKTLAVYGGANMNPQRKGVE--QGVDILVATPGRLFDIIGQFN---LDLSSVT 148
Query: 161 WLIVDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + G VR +I P + +FSAT+++ V + + L +
Sbjct: 149 TLVIDEADRMLDLGFVRDIEKVKRLI-----APVHQTMLFSATYSDAVKQLSHKMLNQPQ 203
Query: 220 QINV 223
+NV
Sbjct: 204 WVNV 207
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 59/184 (32%), Positives = 100/184 (54%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLGF-RAVIVCPTRELAKQTYNETV 102
L+ +G+ I ACA TG+GKTAAF +P++ L P + RA+++ PTRELA Q
Sbjct: 34 LALVGKDIMACAQTGTGKTAAFALPVLEQLAAKPADKPLLRALVMTPTRELAIQVCANIQ 93
Query: 103 RLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLL-QMDPPALNLANVE 160
+ S+ L L+ V G ++ G Q D+L+ TP +L ++ Q + L+L++V
Sbjct: 94 KYSQFLPLKTLAVYGGANMNPQRKGVE--QGVDILVATPGRLFDIIGQFN---LDLSSVT 148
Query: 161 WLIVDESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ + G VR +I P + +FSAT+++ V + + L +
Sbjct: 149 TLVIDEADRMLDLGFVRDIEKVKRLI-----APVHQTMLFSATYSDAVKQLSHKMLNQPQ 203
Query: 220 QINV 223
+NV
Sbjct: 204 WVNV 207
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 58/177 (32%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 63 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 120
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G++ A ++G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 121 IGVQCAVIVGGIDSMSQSLA--LAKKPHIVIATPGRLIDHLE-NTKGFNLRALKYLVMDE 177
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 178 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 230
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 201 (75.8 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 66/192 (34%), Positives = 100/192 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I L+ P+N G +I+ PTRELA QT+
Sbjct: 209 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRN-GTGVLILSPTRELAMQTF 267
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF----DVLITTPNKLVYLLQMDPPAL 154
L E + H G I + + AQK ++++ TP +L+ +Q + P
Sbjct: 268 GV---LKELMMYHVHTYGLIMGGSNRSA--EAQKLGNGINIIVATPGRLLDHMQ-NTPGF 321
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRR 213
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R
Sbjct: 322 MYKNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARI 376
Query: 214 KLKRRVQINVGL 225
LK+ + VG+
Sbjct: 377 SLKKE-PLYVGV 387
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 201 (75.8 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 64/190 (33%), Positives = 99/190 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I L+ P+N G +I+ PTRELA QT+
Sbjct: 210 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRN-GTGVLILSPTRELAMQTF 268
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G I + + + A ++++ TP +L+ +Q + P
Sbjct: 269 GV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQ-NTPGFMY 324
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R L
Sbjct: 325 KNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARISL 379
Query: 216 KRRVQINVGL 225
K+ + VG+
Sbjct: 380 KKE-PLYVGV 388
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 201 (75.8 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 64/190 (33%), Positives = 99/190 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A A TGSGKT AFLIP +I L+ P+N G +I+ PTRELA QT+
Sbjct: 214 IRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRN-GTGVLILSPTRELAMQTF 272
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G I + + + A ++++ TP +L+ +Q + P
Sbjct: 273 GV---LKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLDHMQ-NTPGFMY 328
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ L++DE+D++ + G F ++L I P ++ M FSAT T V R L
Sbjct: 329 KNLQCLVIDEADRILDVG---FEEELKQIIKLL--PTRRQTMLFSATQTRKVEDLARISL 383
Query: 216 KRRVQINVGL 225
K+ + VG+
Sbjct: 384 KKE-PLYVGV 392
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 199 (75.1 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 60/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 305 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 364
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L ++
Sbjct: 365 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQIK 421
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 422 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 477
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 198 (74.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 53/158 (33%), Positives = 82/158 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR CA TGSGKTAAF++PI+ L G +++ PTRELA Q + L + L
Sbjct: 39 GRDCLGCAKTGSGKTAAFVLPILQKL-SEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL 97
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GL+ ++G + + ++K V+I TP +L L+ N+ + +L++DE+
Sbjct: 98 GLKDCIIVGGMDMVTQAL--ELSRKPHVVIATPGRLADHLRSSN-TFNMKKIRFLVLDEA 154
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTE 205
D+L E G F L I +A + +FSAT T+
Sbjct: 155 DRLLEQGCTDFTADLETILSAVPARR-QTLLFSATLTD 191
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 198 (74.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 59/177 (33%), Positives = 96/177 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR I A TGSGKT AF +PI+++L P+ L F A+++ PTRELA Q + L
Sbjct: 87 GRDIIGLAETGSGKTGAFALPILNALLETPQRL-F-ALVLTPTRELAFQISEQFEALGSS 144
Query: 108 LGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+++ VI G I ++ A+K ++I TP +L+ L+ + NL +++L++DE
Sbjct: 145 IGVQSAVIVGGIDSMSQSLA--LAKKPHIVIATPGRLIDHLE-NTKGFNLRALKYLVMDE 201
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+D++ D++ + + K +FSAT T+ V K R LK V+ V
Sbjct: 202 ADRILNMDFETEVDKILKVIPR----DRKTFLFSATMTKKVQKLQRAALKNPVKCAV 254
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 200 (75.5 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 68/211 (32%), Positives = 104/211 (49%)
Query: 24 TLAVVSNSIFKHFEP--HFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIH---SLRG-P 77
TL + FK H +I L GR + A A TGSGKT AFLIP+I L+ P
Sbjct: 180 TLKAIEEMGFKRMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMP 238
Query: 78 KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGP--RSAQKFDV 135
+N G +I+ PTRELA QT+ L E + H G I + + + ++
Sbjct: 239 RN-GTGVLILSPTRELAMQTFGV---LKELMTHHVHTYGLIMGGSNRSAEVQKLLNGINI 294
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
++ TP +L+ +Q + P N++ L++DE+D++ + G F ++L I P +
Sbjct: 295 IVATPGRLLDHMQ-NTPGFMYKNLQCLVIDEADRILDVG---FEEELKQIIKLL--PARR 348
Query: 196 RGM-FSATHTEDVAKWCRRKLKRRVQINVGL 225
+ M FSAT T V R LK+ + VG+
Sbjct: 349 QTMLFSATQTRKVEDLARISLKKE-PLYVGV 378
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 200 (75.5 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 66/190 (34%), Positives = 98/190 (51%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLRG-PKNLGFRAVIVCPTRELAKQTY 98
L+PL GR + A TGSGKT AFLIP +I+ LR P+N G +I+ PTREL+ QT+
Sbjct: 218 LTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRN-GTGVIIISPTRELSMQTF 276
Query: 99 NETVRLSEGLGLRAHVIGKIQQAAEKF--GPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
L E + H G + + + + + ++L+ TP +L+ LQ P L
Sbjct: 277 GV---LKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDHLQNSPDFL-Y 332
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
N++ LI+DE D++ E G F ++L I P ++ M FSAT T + + L
Sbjct: 333 KNLQCLIIDEVDRILEIG---FEEELKQIINLL--PKRRQTMLFSATQTARIEALSKLAL 387
Query: 216 KRRVQINVGL 225
K I VG+
Sbjct: 388 KSE-PIYVGV 396
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 195 (73.7 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 60/208 (28%), Positives = 107/208 (51%)
Query: 20 IIVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLR-GP- 77
++V T+A + H + L GR + A A TG+GKTA+F++PI+ LR G
Sbjct: 11 VLVQTVAQLGYQKPTHIQTQAIPVILQ--GRDLIAAAQTGTGKTASFVLPILEKLRQGQT 68
Query: 78 -KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDV 135
+ RA+I+ PTRELA Q + + + GL++ V G + + A+K R DV
Sbjct: 69 QRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK--QRLIDGVDV 126
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
L+ TP +L+ L A+ +E +++DE+D++ + G F + + I C ++
Sbjct: 127 LVATPGRLMDLYGQR--AVYFEEIEMVVLDEADRMLDMG---FIESINKIID-CLPSEVQ 180
Query: 196 RGMFSATHTEDVAKWCRRKLKRRVQINV 223
+FSAT + V + + ++ +I++
Sbjct: 181 FLLFSATLSRKVRELAKTAVRDPHEISI 208
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 195 (73.7 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 60/208 (28%), Positives = 107/208 (51%)
Query: 20 IIVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLR-GP- 77
++V T+A + H + L GR + A A TG+GKTA+F++PI+ LR G
Sbjct: 11 VLVQTVAQLGYQKPTHIQTQAIPVILQ--GRDLIAAAQTGTGKTASFVLPILEKLRQGQT 68
Query: 78 -KNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDV 135
+ RA+I+ PTRELA Q + + + GL++ V G + + A+K R DV
Sbjct: 69 QRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQK--QRLIDGVDV 126
Query: 136 LITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLK 195
L+ TP +L+ L A+ +E +++DE+D++ + G F + + I C ++
Sbjct: 127 LVATPGRLMDLYGQR--AVYFEEIEMVVLDEADRMLDMG---FIESINKIID-CLPSEVQ 180
Query: 196 RGMFSATHTEDVAKWCRRKLKRRVQINV 223
+FSAT + V + + ++ +I++
Sbjct: 181 FLLFSATLSRKVRELAKTAVRDPHEISI 208
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 198 (74.8 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 71/232 (30%), Positives = 111/232 (47%)
Query: 2 KNILTIALGIFT-IGF-VISIIVTTLAVVSNSIFKHFEPHFTITYLSPL--GRQIFACAP 57
KNI+ + GI T + F + + T + F++ + PL G+ + A
Sbjct: 76 KNIVIVGKGIMTNVTFDSLDLSEQTSIAIKEMGFQYMT-QIQAGSIQPLLEGKDVLGAAR 134
Query: 58 TGSGKTAAFLIPIIHSL---R-GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAH 113
TGSGKT AFLIP + L R P+N G +++CPTRELA QT N L +
Sbjct: 135 TGSGKTLAFLIPAVELLFKERFSPRN-GTGVIVICPTRELAIQTKNVAEELLKHHSQTVS 193
Query: 114 -VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFE 172
VIG + +E R A +++I TP +L+ LQ + A +++ L++DE+D++ E
Sbjct: 194 MVIGGNNRRSE--AQRIASGSNLVIATPGRLLDHLQ-NTKAFIYKHLKCLVIDEADRILE 250
Query: 173 AGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLKRRVQINV 223
F + + I P ++ +FSAT T V R L V ++V
Sbjct: 251 ---ENFEEDMNKILKIL--PKTRQTALFSATQTSKVKDLARVSLTSPVHVDV 297
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 197 (74.4 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 65/184 (35%), Positives = 96/184 (52%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A TGSGKT AFLIP ++HSL+ P+N G +++ PTRELA Q +
Sbjct: 73 IPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRN-GTGIIVITPTRELALQIF 131
Query: 99 NETVRL----SEGLGLRAHVIGKI--QQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP 152
L S+ G+ VIG +Q AEK + ++LI TP +L+ LQ +
Sbjct: 132 GVARELMEFHSQTFGI---VIGGANRRQEAEKL----MKGVNMLIATPGRLLDHLQ-NTK 183
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
N++ LI+DE+D++ E G F D++ I + + +FSAT T V R
Sbjct: 184 GFVFKNLKALIIDEADRILEIG---FEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLAR 240
Query: 213 RKLK 216
L+
Sbjct: 241 ISLR 244
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 199 (75.1 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 61/180 (33%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 299 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 358
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 359 ARKFSFGTCVRAVVIYGGTQFGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQVK 415
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ +FSAT E++ + LK
Sbjct: 416 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLLFSATFPEEIQRLAGEFLK 471
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 199 (75.1 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 57/171 (33%), Positives = 92/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q ++E R
Sbjct: 285 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRF 344
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 345 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVTY 398
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 399 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 445
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 199 (75.1 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 60/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 305 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 364
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L ++
Sbjct: 365 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQIK 421
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 422 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 477
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 199 (75.1 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 61/180 (33%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 310 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 369
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 370 ARKFSFGTCVRAVVIYGGTQFGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQVK 426
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ +FSAT E++ + LK
Sbjct: 427 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLLFSATFPEEIQRLAGEFLK 482
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 199 (75.1 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 61/180 (33%), Positives = 97/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 310 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 369
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 370 ARKFSFGTCVRAVVIYGGTQFGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQVK 426
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ +FSAT E++ + LK
Sbjct: 427 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLLFSATFPEEIQRLAGEFLK 482
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 199 (75.1 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 60/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 323 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 382
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L ++
Sbjct: 383 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQIK 439
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 440 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 495
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 199 (75.1 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 60/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 325 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 384
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L ++
Sbjct: 385 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQIK 441
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 442 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 497
>ASPGD|ASPL0000058969 [details] [associations]
symbol:AN0944 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001308
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 EMBL:AACD01000014 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486 KO:K14779
RefSeq:XP_658548.1 ProteinModelPortal:Q5BET6
EnsemblFungi:CADANIAT00001712 GeneID:2876717 KEGG:ani:AN0944.2
OMA:WSATMGS OrthoDB:EOG4HQHT5 Uniprot:Q5BET6
Length = 742
Score = 138 (53.6 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 52 IFACAPTGSGKTAAFLIPII-----HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
+ APTGSGKT +F+IP+I H P+ G AV+V PT+ELA Q NE +L+
Sbjct: 244 LLVVAPTGSGKTLSFMIPVINKIVRHHHTHPEERGIFAVVVAPTKELASQIVNEGRKLAL 303
Query: 107 GLGLRAHVIGKIQQAAEK 124
G G++ ++ K + E+
Sbjct: 304 GTGVKVTLMKKGMRVVER 321
Score = 116 (45.9 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 126 GPRSAQKFDVLITTPNKLVYLLQMDP--PALNLANVEWLIVDESDKLFEAGVRGFRDQLA 183
GP K D+L++TP +LV L + P L V L++DE+D L + FRDQ
Sbjct: 352 GPVPITKSDILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPL---FRDQTL 408
Query: 184 VIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
I+ +C+ P L+ ++SAT + + +K R
Sbjct: 409 DIWRSCTHPELRASLWSATMGSSIEDMAKTTIKER 443
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 199 (75.1 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 57/180 (31%), Positives = 97/180 (53%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGF-RAVIVCPTRELAKQTYNETVRL 104
LGR I CA TG+GKTAA+++P + L R N R +++ PTREL Q Y T +L
Sbjct: 193 LGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQL 252
Query: 105 SEGLGLRAHV-IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ + + IG + A++ R Q D++I TP +L+ ++ + P+ L ++E LI
Sbjct: 253 CQFTTIDVGLAIGGLDVKAQEAVLR--QNPDIVIATPGRLIDHIK-NTPSFTLDSIEVLI 309
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++ + F +Q+ I +C + +FSAT +E V L + +++ V
Sbjct: 310 LDEADRMLD---EYFAEQMKEIINSCCKTR-QTMLFSATMSEQVKDLAAVSLDKPIKVFV 365
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 198 (74.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 59/191 (30%), Positives = 100/191 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-----HSLRGPKNLGFR---AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ + + L + A+I+ PTREL Q Y +
Sbjct: 311 GRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLD 370
Query: 101 TVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLAN 158
+ S G +R V+ G IQ R +K ++L TP +L+ ++ + + L+
Sbjct: 371 ARKFSYGTCVRPVVVYGGIQPV---HAMRDVEKGCNILCATPGRLLDIVSKEK--IGLSK 425
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKWCRRKL 215
+ +L++DE+D++ + G F ++ + P ++ MFSAT+ E++ + L
Sbjct: 426 LRYLVLDEADRMLDMG---FAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYL 482
Query: 216 K-RRVQINVGL 225
K + + VGL
Sbjct: 483 KSEHLFVVVGL 493
>POMBASE|SPBC21H7.04 [details] [associations]
symbol:dbp7 "ATP-dependent RNA helicase Dbp7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC21H7.04
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
HOGENOM:HOG000268799 OrthoDB:EOG4W6S47 PIR:T39930
RefSeq:NP_595929.1 ProteinModelPortal:O60173 STRING:O60173
EnsemblFungi:SPBC21H7.04.1 GeneID:2540518 KEGG:spo:SPBC21H7.04
NextBio:20801645 Uniprot:O60173
Length = 709
Score = 198 (74.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 62/183 (33%), Positives = 97/183 (53%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSL-RGPKNL-----GFRAVIVCPTRELAKQTYNETVR 103
+ F A TGSGKT A+L+PI+ L R PKNL G AVI+ PTREL +Q YN +
Sbjct: 179 KDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANK 238
Query: 104 LSEG-LG---LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
L+ L + +VIG ++ +EK R + ++LI TP +L L+ + AL+++ V
Sbjct: 239 LNNNPLSHWIVSCNVIGGEKKKSEK--ARIRKGVNILIGTPGRLADHLE-NTEALDVSQV 295
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVI--YAACSGPNLKRGMFSATHTEDVAKWCRRKLKR 217
W+++DE D+L + G F + L I Y +K+ + + + V C +K
Sbjct: 296 RWVVLDEGDRLMDMG---FEETLTKILSYLESQSSIIKKDL--SIPSRKVTMLCSATMKD 350
Query: 218 RVQ 220
V+
Sbjct: 351 TVK 353
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 326 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLE 385
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L ++
Sbjct: 386 ARKFSFGTCVRAVVIYGGTQLGHSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQIK 442
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 443 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAAEFLK 498
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/182 (32%), Positives = 95/182 (52%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYN---ETV 102
LG+ I A A TGSGKTAAF+IPII L + K R +++ PTRELA Q + +
Sbjct: 267 LGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIA 326
Query: 103 RLSEGLGLRAHVIG-KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
R G+ V G ++Q + R D++I TP + + ++ + + N+ +VE
Sbjct: 327 RFVSGITFGLAVGGLNLRQQEQMLKSRP----DIVIATPGRFIDHIR-NSASFNVDSVEI 381
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ E GF+D+L I N + +FSAT + LK+ V+I
Sbjct: 382 LVMDEADRMLE---EGFQDELNEIMGLLPS-NRQNLLFSATMNSKIKSLVSLSLKKPVRI 437
Query: 222 NV 223
+
Sbjct: 438 MI 439
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/190 (33%), Positives = 98/190 (51%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A TGSGKT AFLIP +++SL+ P+N G +I+ PTRELA Q +
Sbjct: 139 IPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRN-GTAVIIITPTRELALQIF 197
Query: 99 NETVRL----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
L S+ G+ VIG + E + A+ ++L+ TP +L L +
Sbjct: 198 GVARELMQFHSQTCGI---VIGGADRRQE--ATKLAKGVNLLVATPGRL--LDHLKNTQF 250
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+N++ L++DE+D++ E G F D++ I N + +FSAT T V R
Sbjct: 251 VFSNLKALVIDEADRILEIG---FEDEMKQIIKVLPNENRQSMLFSATQTTKVEDLARIS 307
Query: 215 LKRR-VQINV 223
L+ + INV
Sbjct: 308 LRPGPLYINV 317
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 196 (74.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/190 (33%), Positives = 98/190 (51%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIP---IIHSLR-GPKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A TGSGKT AFLIP +++SL+ P+N G +I+ PTRELA Q +
Sbjct: 139 IPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRN-GTAVIIITPTRELALQIF 197
Query: 99 NETVRL----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
L S+ G+ VIG + E + A+ ++L+ TP +L L +
Sbjct: 198 GVARELMQFHSQTCGI---VIGGADRRQE--ATKLAKGVNLLVATPGRL--LDHLKNTQF 250
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
+N++ L++DE+D++ E G F D++ I N + +FSAT T V R
Sbjct: 251 VFSNLKALVIDEADRILEIG---FEDEMKQIIKVLPNENRQSMLFSATQTTKVEDLARIS 307
Query: 215 LKRR-VQINV 223
L+ + INV
Sbjct: 308 LRPGPLYINV 317
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 199 (75.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/171 (33%), Positives = 92/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q ++E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVTY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 199 (75.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 57/171 (33%), Positives = 92/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q ++E R
Sbjct: 292 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRF 351
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 352 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVTY 405
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 406 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 452
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/181 (33%), Positives = 94/181 (51%)
Query: 50 RQIFACAPTGSGKTAAFLIPII-HSLRGPKNLG--FRAVIVCPTRELAKQTYNETVRLSE 106
R I A APTG+GKTA+FL+P + H + P+ R +I+ PTRELA Q + L+
Sbjct: 39 RDILARAPTGTGKTASFLLPALQHLIDFPRRYSGQARVLILTPTRELASQIHRYACHLAT 98
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
GL +I G + A ++ + D+L+ TP +L+ L D + +V+ LI+D
Sbjct: 99 DQGLNIAIITGGVPYAPQEEALKG--NIDILVATPGRLMEYL--DKGKFSAESVDILIID 154
Query: 166 ESDKLFEAGVRGFRDQLAVIYA-ACSGPNLKRGM-FSAT-HTEDVAKWCRRKLKRRVQIN 222
E+D++ + G AV+ A A K+ M FSAT V ++ R L ++I+
Sbjct: 155 EADRMLDMGFS------AVVKAIALEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEID 208
Query: 223 V 223
V
Sbjct: 209 V 209
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 193 (73.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/181 (33%), Positives = 94/181 (51%)
Query: 50 RQIFACAPTGSGKTAAFLIPII-HSLRGPKNLG--FRAVIVCPTRELAKQTYNETVRLSE 106
R I A APTG+GKTA+FL+P + H + P+ R +I+ PTRELA Q + L+
Sbjct: 39 RDILARAPTGTGKTASFLLPALQHLIDFPRRYSGQARVLILTPTRELASQIHRYACHLAT 98
Query: 107 GLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
GL +I G + A ++ + D+L+ TP +L+ L D + +V+ LI+D
Sbjct: 99 DQGLNIAIITGGVPYAPQEEALKG--NIDILVATPGRLMEYL--DKGKFSAESVDILIID 154
Query: 166 ESDKLFEAGVRGFRDQLAVIYA-ACSGPNLKRGM-FSAT-HTEDVAKWCRRKLKRRVQIN 222
E+D++ + G AV+ A A K+ M FSAT V ++ R L ++I+
Sbjct: 155 EADRMLDMGFS------AVVKAIALEAQGRKQNMLFSATLEGSGVIRFAREVLNDPIEID 208
Query: 223 V 223
V
Sbjct: 209 V 209
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 198 (74.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 61/180 (33%), Positives = 96/180 (53%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
LG+ I A TGSGKTAAF++PI+ L R K R I+ PTRELA Q YN +L+
Sbjct: 334 LGKDIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLA 393
Query: 106 EGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ ++G ++ + ++ DV+I TP + + ++ + + + +E L++
Sbjct: 394 TYTDITFCQLVGGFSLREQENVLK--KRPDVIIATPGRFIDHMR-NSASFTVDTLEILVL 450
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ E G F D+L I P ++ M FSAT T+ V K R L R V++ V
Sbjct: 451 DEADRMLEDG---FADELNEILTTI--PKSRQTMLFSATMTDSVDKLIRVGLNRPVRLMV 505
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 198 (74.8 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 60/183 (32%), Positives = 96/183 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR A TGSGKTAAF+ PI+ + K L G AVIVCPTREL +Q + E R
Sbjct: 294 GRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAVIVCPTRELCQQIHAECKRF 353
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ GLR+ + G + + A+ + ++++ TP +L+ + A +L V +
Sbjct: 354 GKAYGLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATSLQRVTF 407
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R L +++
Sbjct: 408 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLARDILVDPIRV 463
Query: 222 NVG 224
G
Sbjct: 464 VQG 466
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 195 (73.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 62/182 (34%), Positives = 89/182 (48%)
Query: 45 LSPL--GRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTRELAKQTY 98
+ PL GR + A TGSGKT AFLIP I L P+N G +I+ PTRELA Q +
Sbjct: 120 IPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRN-GTGVIIISPTRELALQIF 178
Query: 99 NETVRL----SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
L + G+ VIG + AE + + ++L+ TP +L+ LQ +
Sbjct: 179 GVAKELLKYHHQTFGI---VIGGANRRAE--ADKLVKGVNLLVATPGRLLDHLQ-NTKGF 232
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
N+ L++DE+D++ E G F D++ I N + +FSAT T V R
Sbjct: 233 VFRNLRSLVIDEADRILEIG---FEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARIS 289
Query: 215 LK 216
LK
Sbjct: 290 LK 291
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 196 (74.1 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 59/173 (34%), Positives = 95/173 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q Y E
Sbjct: 298 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 357
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 358 ARKFSFGTCVRAVVIYGGTQFGHSVR-QIVQGCNILCATPGRLMDIIGKEK--IGLKQVK 414
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAK 209
+L++DE+D++ + G F ++ + + C G P+ ++ +FSAT E++ +
Sbjct: 415 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLLFSATFPEEIQR 463
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 196 (74.1 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 61/180 (33%), Positives = 96/180 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H + G F+ +IV PTREL Q Y E
Sbjct: 326 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELINQIYLE 385
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +RA VI Q + Q ++L TP +L+ ++ + + L V+
Sbjct: 386 ARKFSFGTCVRAVVIYGGTQLGYSIR-QIVQGCNILCATPGRLMDIIGKEK--IGLRQVK 442
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG-PNLKRG---MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G F ++ + + C G P+ ++ MFSAT E++ + LK
Sbjct: 443 YLVLDEADRMLDMG---FGPEMKKLIS-CPGMPSKEQRQTLMFSATFPEEIQRLAGEFLK 498
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 197 (74.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 197 (74.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 197 (74.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 193 (73.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 59/180 (32%), Positives = 100/180 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPK-NLG-FRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +P++ L +G K G RA+++ PTRELA Q
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYG 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ L LR+ V+ G + + R DVL+ TP +L+ L+Q + A+ +E L++
Sbjct: 98 KYLPLRSAVVFGGVPINPQINKLRHG--VDVLVATPGRLLDLVQQN--AVKFNQLEILVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
DE+D++ + G +R + LA++ A NL MFSAT ++++ + + + V+I+V
Sbjct: 154 DEADRMLDMGFIRDIKKILALLPA--KRQNL---MFSATFSDEIRELAKGLVNHPVEISV 208
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 196 (74.1 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 57/171 (33%), Positives = 91/171 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKTAAF+ P++ + K L G AVIVCPTREL +Q + E R
Sbjct: 290 GRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRF 349
Query: 105 SEGLGLRAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
+ LR+ + G + + A+ + ++++ TP +L+ + A NL V +
Sbjct: 350 GKAYNLRSVAVYGGGSMWEQAKAL----QEGAEIVVCTPGRLID--HVKKKATNLQRVSY 403
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
L+ DE+D++F+ G F Q+ I A+ P+ + +FSAT + + K R
Sbjct: 404 LVFDEADRMFDMG---FEYQVRSI-ASHVRPDRQTLLFSATFRKKIEKLAR 450
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 193 (73.0 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 60/194 (30%), Positives = 97/194 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL--RGPKNL-----------GF-RAVIVCPTRELA 94
GR + ACA TGSGKT FL P+ L GP + G+ A+++ PTRELA
Sbjct: 191 GRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELA 250
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPA 153
Q + E + + +R V+ + R + D+L+ TP +L LL+
Sbjct: 251 TQIFEEARKFTYRSWVRPCVVYGGAPIGNQM--REVDRGCDLLVATPGRLNDLLERGK-- 306
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKW 210
++LAN+++L++DE+D++ + G F Q+ I C P+++ MFSAT D+
Sbjct: 307 VSLANIKYLVLDEADRMLDMG---FEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHL 363
Query: 211 CRRKLKRRVQINVG 224
R L + ++VG
Sbjct: 364 ARDFLDNYIFLSVG 377
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 194 (73.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 63/182 (34%), Positives = 96/182 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK--NL-GFRAVIVCPTRELAKQTYNETVRLS 105
GR I A TGSGKT AF++P+I +L K +L G A+++ PTRELA QT+ V++
Sbjct: 76 GRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIG 135
Query: 106 EGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL--ANVEWL 162
A +IG EK + ++L+ TP +L LQ A+N + ++ L
Sbjct: 136 RLHSFSAGLIIGGNNYKEEK---ERLSRMNILVCTPGRL---LQHIDQAVNFDTSGLQML 189
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQI 221
I+DE+D++ + G FR L I ++ P ++ M FSAT T+ V R L+ I
Sbjct: 190 ILDEADRILDMG---FRTTLDAIVSSL--PVHRQTMLFSATQTKSVKDLARLSLQNPDFI 244
Query: 222 NV 223
+V
Sbjct: 245 SV 246
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 192 (72.6 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 65/194 (33%), Positives = 102/194 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GP----KNLG-F-------RAVIVCPTRELA 94
GR + ACA TGSGKT FL P++ S + GP ++ G F AVI+ PTRELA
Sbjct: 179 GRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELA 238
Query: 95 KQTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPA 153
Q ++E + + ++A V+ + R ++ D+L+ TP +L LL+
Sbjct: 239 TQIFDEAKKFTYRSWVKACVVYGGSPIGNQL--REIERGCDLLVATPGRLNDLLERGK-- 294
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACS-GPNLKRG--MFSATHTEDVAKW 210
++LANV++L++DE+D++ + G F Q+ I C P +R MFSAT D+
Sbjct: 295 ISLANVKYLVLDEADRMLDMG---FEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHL 351
Query: 211 CRRKLKRRVQINVG 224
R L + ++VG
Sbjct: 352 ARDFLSDYIFLSVG 365
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 193 (73.0 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 62/181 (34%), Positives = 92/181 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGF------RAVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ G F A+IV PTREL Q Y E
Sbjct: 314 GRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAPTRELINQIYLE 373
Query: 101 TVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLAN 158
+ + G +R V+ G I + R K +VL TP +L L+ + L+
Sbjct: 374 ARKFAYGTCVRPVVVYGGINTG---YTIREVLKGCNVLCATPGRLHDLIGRGK--IGLSK 428
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKWCRRKL 215
V +L++DE+D++ + G F ++ + A+ P+ + MFSAT+ ED+ + L
Sbjct: 429 VRYLVLDEADRMLDMG---FEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFL 485
Query: 216 K 216
K
Sbjct: 486 K 486
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 192 (72.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 61/178 (34%), Positives = 87/178 (48%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR--------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ L R AVIV PTREL Q Y E
Sbjct: 218 GRDLMACAQTGSGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQE 277
Query: 101 TVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLAN 158
+ S G +R V+ G + + R +K +VL TP +L+ ++ + L+
Sbjct: 278 ARKFSFGTCVRPVVVYGGVNTGYQM---REIEKGCNVLCGTPGRLLDMIGRGK--VGLSK 332
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK 216
V L++DE+D++ + G +L S + MFSAT ED+ + LK
Sbjct: 333 VRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLK 390
>SGD|S000005321 [details] [associations]
symbol:DBP6 "Essential protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0030687
"preribosome, large subunit precursor" evidence=IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000005321
GO:GO:0005524 GO:GO:0005730 EMBL:BK006947 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513 GO:GO:0000466 KO:K14807
HOGENOM:HOG000203294 OrthoDB:EOG490BK3 EMBL:Z71653 PIR:S63369
RefSeq:NP_014436.1 ProteinModelPortal:P53734 SMR:P53734
IntAct:P53734 MINT:MINT-2731978 STRING:P53734 PaxDb:P53734
PeptideAtlas:P53734 PRIDE:P53734 EnsemblFungi:YNR038W GeneID:855774
KEGG:sce:YNR038W CYGD:YNR038w GeneTree:ENSGT00550000075141
OMA:SSREYVH NextBio:980232 Genevestigator:P53734 GermOnline:YNR038W
Uniprot:P53734
Length = 629
Score = 192 (72.6 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 60/183 (32%), Positives = 96/183 (52%)
Query: 2 KNILTIALGIFTIGFVI-SIIVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGS 60
K + I T F I SII+ ++ V N + +FT +G I A TGS
Sbjct: 184 KLLQNICKNFSTNTFPIQSIILDSILPVLNFTLNVSKRNFT----RRIG-DILVNAATGS 238
Query: 61 GKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQ 120
GKT A+ IPI+ +L + R +I+ PT+ L Q Y +L++G L I K++
Sbjct: 239 GKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVS-IAKLEN 297
Query: 121 AA-EKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFR 179
+ ++ S + D+LITTP +LV L M ++NL N+++LI+DE+D+L +G+
Sbjct: 298 SLKDEHKKLSNLEPDILITTPGRLVDHLNMK--SINLKNLKFLIIDEADRLLNQSFQGWC 355
Query: 180 DQL 182
+L
Sbjct: 356 PKL 358
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 181 (68.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 410 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQ 469
Query: 96 QTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 470 QIEEETIKFGKPLGIRTVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 525
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 526 VLSRCTYVVLDEADRMIDMG 545
Score = 37 (18.1 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 591 MFTATMPPAVERLARSYLRRPAVVYIG 617
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 189 (71.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 54/181 (29%), Positives = 98/181 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG--FRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +PI+ L +GPK RA+I+ PTRELA Q + +
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYG 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L L++ V+ G ++ + R + D+L+ TP +L+ L + A+ +E L++
Sbjct: 98 RHLPLKSAVVFGGVKINPQM--QRMCKGADILVATPGRLMDLYNQN--AVKFDQLEILVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQIN 222
DE+D++ + G +R L ++ P ++ + FSAT + ++ + + + V+I+
Sbjct: 154 DEADRMLDMGFIRDIHKILKLL------PEKRQNLLFSATFSTEIRELAKGLVNNPVEIS 207
Query: 223 V 223
V
Sbjct: 208 V 208
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 189 (71.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 54/181 (29%), Positives = 98/181 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG--FRAVIVCPTRELAKQTYNETVRLS 105
G+ + A A TG+GKTA F +PI+ L +GPK RA+I+ PTRELA Q + +
Sbjct: 38 GKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYG 97
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
L L++ V+ G ++ + R + D+L+ TP +L+ L + A+ +E L++
Sbjct: 98 RHLPLKSAVVFGGVKINPQM--QRMCKGADILVATPGRLMDLYNQN--AVKFDQLEILVL 153
Query: 165 DESDKLFEAG-VRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQIN 222
DE+D++ + G +R L ++ P ++ + FSAT + ++ + + + V+I+
Sbjct: 154 DEADRMLDMGFIRDIHKILKLL------PEKRQNLLFSATFSTEIRELAKGLVNNPVEIS 207
Query: 223 V 223
V
Sbjct: 208 V 208
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 181 (68.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 422 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ 481
Query: 96 QTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 482 QIEEETIKFGKPLGIRTVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 537
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 538 VLSRCTYVVLDEADRMIDMG 557
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 603 MFTATMPPAVERLARSYLRRPAVVYIG 629
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 181 (68.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 423 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ 482
Query: 96 QTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 483 QIEEETIKFGKPLGIRTVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 538
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 539 VLSRCTYVVLDEADRMIDMG 558
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIG 630
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 181 (68.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 423 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ 482
Query: 96 QTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 483 QIEEETIKFGKPLGIRTVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 538
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 539 VLSRCTYVVLDEADRMIDMG 558
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIG 630
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 181 (68.8 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 423 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ 482
Query: 96 QTYNETVRLSEGLGLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 483 QIEEETIKFGKPLGIRTVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 538
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 539 VLSRCTYVVLDEADRMIDMG 558
Score = 37 (18.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 604 MFTATMPPAVERLARSYLRRPAVVYIG 630
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 190 (71.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 57/183 (31%), Positives = 97/183 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVR 103
G+ + A TGSGKT AF++P +H L P NL + +++ PTRELA+Q E ++
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQP-NLKYGDGPIVLVLAPTRELAEQIRQECIK 208
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
S +R G + ++ + + + Q +LI P +L+ LL+ + NL V +L
Sbjct: 209 FSTESKIRNTCAYGGVPKSGQIYALK--QGVHILIACPGRLIDLLEQN--VTNLMRVTYL 264
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR-VQI 221
++DE+DK+ + G F Q+ I P+ + M+SAT ++V + K + +Q+
Sbjct: 265 VLDEADKMLDMG---FELQIRKIVDQIR-PDRQTLMWSATWPKEVQALAKDLCKEQPIQV 320
Query: 222 NVG 224
NVG
Sbjct: 321 NVG 323
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 190 (71.9 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 57/183 (31%), Positives = 97/183 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGPKNLGFR----AVIVCPTRELAKQTYNETVR 103
G+ + A TGSGKT AF++P +H L P NL + +++ PTRELA+Q E ++
Sbjct: 150 GKDMIGKAETGSGKTLAFILPAFVHILAQP-NLKYGDGPIVLVLAPTRELAEQIRQECIK 208
Query: 104 LSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
S +R G + ++ + + + Q +LI P +L+ LL+ + NL V +L
Sbjct: 209 FSTESKIRNTCAYGGVPKSGQIYALK--QGVHILIACPGRLIDLLEQN--VTNLMRVTYL 264
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR-VQI 221
++DE+DK+ + G F Q+ I P+ + M+SAT ++V + K + +Q+
Sbjct: 265 VLDEADKMLDMG---FELQIRKIVDQIR-PDRQTLMWSATWPKEVQALAKDLCKEQPIQV 320
Query: 222 NVG 224
NVG
Sbjct: 321 NVG 323
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 194 (73.4 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAV--IVCPTRELAKQTYNETVRL 104
GR A TGSGKT F++P++ ++ P G + ++ PTREL +Q Y++ +
Sbjct: 433 GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKF 492
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
S+ LG+ + G QQ +E K G ++++ TP +++ +L + NL
Sbjct: 493 SKALGIICVPVYGGSGVAQQISELKRGT------EIVVCTPGRMIDILCTSSGKITNLRR 546
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V +L++DE+D++F+ G F Q+ I P+ + +FSAT V R+ L +
Sbjct: 547 VTYLVMDEADRMFDMG---FEPQITRIVQNIR-PDRQTVLFSATFPRQVETLARKVLNKP 602
Query: 219 VQINVGLR 226
V+I VG R
Sbjct: 603 VEIQVGGR 610
>UNIPROTKB|F1SV16 [details] [associations]
symbol:F1SV16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000016375 OMA:SAREVPM Uniprot:F1SV16
Length = 301
Score = 183 (69.5 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + N++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETICFHATNLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + I P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAIIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 192 (72.6 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 55/182 (30%), Positives = 103/182 (56%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNL-GFRAVIVCPTRELAKQTYNETV 102
L+ GR + A A TGSGKTAAF +P + L PK + R +I+ PTRELA Q ++
Sbjct: 200 LALTGRDLCASAITGSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQ 259
Query: 103 RLSEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L++ ++ ++G + ++ RS D+++ TP +++ L+ + +++L ++
Sbjct: 260 NLAQFTDIKCGLIVGGLSVREQEVVLRSMP--DIVVATPGRMIDHLR-NSMSVDLDDLAV 316
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQ 220
LI+DE+D+L + G F ++ + C P ++ M FSAT TE+V + + L + ++
Sbjct: 317 LILDEADRLLQTG---FATEITELVRLC--PKRRQTMLFSATMTEEVKELVKLSLNKPLR 371
Query: 221 IN 222
++
Sbjct: 372 LS 373
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 187 (70.9 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 66/192 (34%), Positives = 97/192 (50%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNET 101
L+ GR + A + TGSGKT AF++P++H K R +I+ PTRELAKQ Y E
Sbjct: 38 LTIAGRDLLASSKTGSGKTLAFVLPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGEL 97
Query: 102 VRLSEGLGLRAHVI--GKI---QQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+ GL A +I G+ Q A GPR ++ TP +L +D +L L
Sbjct: 98 RSMLGGLSYTATLITGGENFNDQVKALARGPR------FIVATPGRLAD--HLDHRSLFL 149
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT--HTE--DVAKWCR 212
+E L++DE+D++ + G F +L I+ A + MFSAT H + D+A
Sbjct: 150 EGLETLVLDEADRMLDLG---FAKELRRIHNAAKHRRRQTLMFSATLDHADVNDMAMELL 206
Query: 213 RKLKRRVQINVG 224
+ KR + I VG
Sbjct: 207 NEPKR-IAIGVG 217
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 187 (70.9 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 66/192 (34%), Positives = 97/192 (50%)
Query: 45 LSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF---RAVIVCPTRELAKQTYNET 101
L+ GR + A + TGSGKT AF++P++H K R +I+ PTRELAKQ Y E
Sbjct: 38 LTIAGRDLLASSKTGSGKTLAFVLPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGEL 97
Query: 102 VRLSEGLGLRAHVI--GKI---QQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
+ GL A +I G+ Q A GPR ++ TP +L +D +L L
Sbjct: 98 RSMLGGLSYTATLITGGENFNDQVKALARGPR------FIVATPGRLAD--HLDHRSLFL 149
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSAT--HTE--DVAKWCR 212
+E L++DE+D++ + G F +L I+ A + MFSAT H + D+A
Sbjct: 150 EGLETLVLDEADRMLDLG---FAKELRRIHNAAKHRRRQTLMFSATLDHADVNDMAMELL 206
Query: 213 RKLKRRVQINVG 224
+ KR + I VG
Sbjct: 207 NEPKR-IAIGVG 217
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 193 (73.0 bits), Expect = 7.1e-14, P = 7.1e-14
Identities = 57/188 (30%), Positives = 97/188 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAV--IVCPTRELAKQTYNETVRL 104
GR A TGSGKT F++P++ ++ P G + ++ PTREL +Q +++ +
Sbjct: 566 GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKF 625
Query: 105 SEGLGLRAHVI----GKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLAN 158
S+ LG+R + G QQ +E K G ++++ TP +++ +L + NL
Sbjct: 626 SKPLGIRCVPVYGGSGVAQQISELKRGT------EIVVCTPGRMIDILCTSSGKITNLRR 679
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRR 218
V +L++DE+D++F+ G F Q+ I P + +FSAT V R+ L +
Sbjct: 680 VTFLVMDEADRMFDMG---FEPQITRIIQNIR-PERQTVLFSATFPRQVETLARKVLNKP 735
Query: 219 VQINVGLR 226
V+I VG R
Sbjct: 736 VEIQVGGR 743
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 56/172 (32%), Positives = 93/172 (54%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE--- 106
+ A A TG+GKTAAF +PI+ L P RA+++ PTRELA+Q + +
Sbjct: 45 VMARAQTGTGKTAAFALPILQQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTD 104
Query: 107 -GLGLRAHVIGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+G+ + +Q +E K G D+LI TP +L+ LL+ + +++L+N+E L+
Sbjct: 105 VTIGIAYGGVSTKKQISELKVG------VDILIATPGRLLDLLRTE--SVSLSNIETLVF 156
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
DE+D++ + G + DQ+ Y P K+ + FSAT +D+ K + L
Sbjct: 157 DEADRMLDMGFKEEIDQITQ-YL----PKTKQTLLFSATFADDIYKMSKNIL 203
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 186 (70.5 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 56/172 (32%), Positives = 93/172 (54%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFRAVIVCPTRELAKQTYNETVRLSE--- 106
+ A A TG+GKTAAF +PI+ L P RA+++ PTRELA+Q + +
Sbjct: 45 VMARAQTGTGKTAAFALPILQQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTD 104
Query: 107 -GLGLRAHVIGKIQQAAE-KFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+G+ + +Q +E K G D+LI TP +L+ LL+ + +++L+N+E L+
Sbjct: 105 VTIGIAYGGVSTKKQISELKVG------VDILIATPGRLLDLLRTE--SVSLSNIETLVF 156
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
DE+D++ + G + DQ+ Y P K+ + FSAT +D+ K + L
Sbjct: 157 DEADRMLDMGFKEEIDQITQ-YL----PKTKQTLLFSATFADDIYKMSKNIL 203
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 191 (72.3 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 60/181 (33%), Positives = 91/181 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFLIP++ L + + G A+I+ PTRELA Q + ++
Sbjct: 109 GKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVG 168
Query: 106 EGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP-PALNLANVEWLIV 164
+ A +I I KF + ++LI TP +L L MD P N + +E L++
Sbjct: 169 KHHDFSAGLI--IGGKNLKFERTRMDQCNILICTPGRL--LQHMDENPLFNTSTMEMLVL 224
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRVQINV 223
DE+D+ + G F+ L I + P +++ + FSAT T V R LK V +
Sbjct: 225 DEADRCLDMG---FQKTLNSIIE--NFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGY 279
Query: 224 G 224
G
Sbjct: 280 G 280
>DICTYBASE|DDB_G0271708 [details] [associations]
symbol:ddx31 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0271708 GO:GO:0005524
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HSSP:P10081
RefSeq:XP_645498.1 ProteinModelPortal:Q869P0
EnsemblProtists:DDB0234202 GeneID:8618126 KEGG:ddi:DDB_G0271708
OMA:THIQEAS Uniprot:Q869P0
Length = 908
Score = 191 (72.3 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 62/203 (30%), Positives = 102/203 (50%)
Query: 34 KHFEP-HFTITYLSPL--GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIV 87
KH +P H ++P+ G A TGSGKT ++LIP++ L R ++ G VI+
Sbjct: 227 KHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLTEQRVTRSDGCYCVII 286
Query: 88 CPTRELAKQTYNETVRLSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY 145
PTREL+ Q Y E +L + + ++G ++AEK R + ++L+ TP +L+
Sbjct: 287 TPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEK--ARIRKGINILVATPGRLLD 344
Query: 146 LLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPN---LKRG--MFS 200
LQ + + N++W I+DE+DKL + G +D +I S KR + S
Sbjct: 345 HLQ-NTQSFPTDNIKWCILDEADKLLDLGFE--KDVTTIINLLDSKKRTMKFKRQNILVS 401
Query: 201 ATHTEDVAKWCRRKLKRRVQINV 223
AT +E +++ L V I +
Sbjct: 402 ATLSEGISRLASLSLTSPVYIGL 424
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 177 (67.4 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 49/140 (35%), Positives = 80/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKT AFLIP++ ++ PK + G A+I+ PTRELA+
Sbjct: 426 PIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQ 485
Query: 96 QTYNETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET + + LG+R V+ G + + E+ G R +++I TP +L+ +L+ L
Sbjct: 486 QIEEETTKFGQPLGIRTVVVVGGLSR--EEQGFRLRLGCEIVIATPGRLIDVLENRYLVL 543
Query: 155 NLANVEWLIVDESDKLFEAG 174
N ++++DE+D++ + G
Sbjct: 544 NQCT--YIVLDEADRMIDMG 561
Score = 38 (18.4 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 198 MFSATHTEDVAKWCRRKLKRRVQINVG 224
MF+AT V + R L+R + +G
Sbjct: 606 MFTATMPPAVERLARTYLRRPATVYIG 632
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 192 (72.6 bits), Expect = 9.1e-14, P = 9.1e-14
Identities = 60/187 (32%), Positives = 99/187 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFLIP+ ++ + L G +I+ PTRELA Q + +
Sbjct: 578 GRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPF 637
Query: 105 SEGLGLRAHVI---GKIQ-QAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANV 159
+ L LRA I+ Q AE R A+ +++ TP +++ LL + + NL V
Sbjct: 638 LKALNLRAVCAYGGAPIKDQIAEL--KRGAE---IIVCTPGRMIDLLAANAGRVTNLRRV 692
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRV 219
++++DE+D++F+ G F Q+ I + P+ + +FSAT ++ R+ L + +
Sbjct: 693 TYVVLDEADRMFDMG---FEPQVMKILSNVR-PDRQTVLFSATFPRNMEALARKTLTKPI 748
Query: 220 QINVGLR 226
+I VG R
Sbjct: 749 EIVVGGR 755
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 187 (70.9 bits), Expect = 9.7e-14, P = 9.7e-14
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + +CA TGSGKTAAFL+PI+ + G F+ +IV PTREL Q + E
Sbjct: 204 GRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLE 263
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ G +R VI Q + Q ++L TP +L+ +++ ++L V+
Sbjct: 264 ARKFVYGTCIRPVVIYGGTQTGHSIR-QIMQGCNILCATPGRLLDIIEKGK--ISLVEVK 320
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G G + + Y + ++ MFSAT E+V + LK
Sbjct: 321 YLVLDEADRMLDMGF-GLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLK 376
>CGD|CAL0000117 [details] [associations]
symbol:DBP7 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000117 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
EMBL:AP006852 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 EMBL:AACQ01000156
RefSeq:XP_712474.1 RefSeq:XP_888745.1 ProteinModelPortal:Q59S50
STRING:Q59S50 GeneID:3645903 GeneID:3704147 KEGG:cal:CaO19.6902
KEGG:cal:CaO19_6902 KO:K14806 Uniprot:Q59S50
Length = 727
Score = 189 (71.6 bits), Expect = 9.8e-14, P = 9.8e-14
Identities = 55/144 (38%), Positives = 79/144 (54%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSL-RGPK-----NLGFRAVIVCPTRELAKQTYN--ETVR 103
+F A TGSGKT AF++PI H L R K G A+I+ PTRELA Q Y ET+
Sbjct: 177 LFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFAIILTPTRELATQIYGVLETLT 236
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ VIG ++ +EK R + ++L+ TP +L L+ + L+++ + WL+
Sbjct: 237 RCHHWIVPGIVIGGEKKKSEK--ARLRKGCNILVATPGRLADHLE-NTKTLDISQLRWLV 293
Query: 164 VDESDKLFEAGVRGFRDQLAVIYA 187
+DE DKL E G F D +A I A
Sbjct: 294 LDEGDKLMELG---FEDTIAQITA 314
>ZFIN|ZDB-GENE-030131-3973 [details] [associations]
symbol:ddx31 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 31" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-3973 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
KO:K14806 HOGENOM:HOG000268799 GeneTree:ENSGT00550000075041
CTD:64794 HOVERGEN:HBG103793 OrthoDB:EOG42V8FK EMBL:BX276128
IPI:IPI00614096 RefSeq:XP_683832.1 UniGene:Dr.79241
Ensembl:ENSDART00000148314 GeneID:325248 KEGG:dre:325248
InParanoid:A2BFD2 NextBio:20809193 Uniprot:A2BFD2
Length = 739
Score = 189 (71.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 67/212 (31%), Positives = 110/212 (51%)
Query: 21 IVTTLAVVSNSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRG--PK 78
+V TL V N TI L G+ + TGSGKT A+ IP++ L+ PK
Sbjct: 165 LVATLHKVLNVSSMTSVQKQTIPVLMS-GKDAVVRSQTGSGKTLAYGIPMVQFLQAIQPK 223
Query: 79 ---NLGFRAVIVCPTRELAKQTYNETVRLSEGLG--LRAHVIGKIQQAAEKFGPRSAQKF 133
+ G AV++ PTRELA Q++ +L + ++G ++ AEK R +
Sbjct: 224 VKRSDGPLAVVIVPTRELALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEK--ARLRKGI 281
Query: 134 DVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAA--CSG 191
+VLI+TP +LV ++ + ++ + V WLI+DE+D++ + G F L VI A +G
Sbjct: 282 NVLISTPGRLVDHIK-NTLSIAFSAVRWLILDEADRILDLG---FEKDLTVILNALNAAG 337
Query: 192 PNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
P+ + + SAT TE +++ +K V ++V
Sbjct: 338 PDRQNVLLSATITEGLSRLASISMKDPVSVHV 369
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 55/177 (31%), Positives = 90/177 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR--GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + +CA TGSGKTAAFL+PI+ + G F+ +IV PTREL Q + E
Sbjct: 204 GRDLMSCAQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLE 263
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ G +R VI Q + Q ++L TP +L+ +++ ++L V+
Sbjct: 264 ARKFVYGTCIRPVVIYGGTQTGHSIR-QIMQGCNILCATPGRLLDIIEKGK--ISLVEVK 320
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLK 216
+L++DE+D++ + G G + + Y + ++ MFSAT E+V + LK
Sbjct: 321 YLVLDEADRMLDMGF-GLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLK 376
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 187 (70.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 62/177 (35%), Positives = 92/177 (51%)
Query: 56 APTGSGKTAAFLIPIIHSLRG-----PKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGL 110
A TGSGKT AF++P++ LR PK VI+ PTREL+ Q YN L
Sbjct: 60 AATGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLAN 119
Query: 111 RAHVI---GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
V+ G+ +A K + +VLI TP +L +++ L+ N+E LI+DE+
Sbjct: 120 VNSVLLVGGREVKADMKI--IEEEGCNVLIGTPGRLSDIMER-MEILDFRNLEILILDEA 176
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLKRRVQINV 223
D+L E G F+ Q+ I + P +R G+FSAT TE V + + L+ V++ V
Sbjct: 177 DRLLEMG---FQRQVNYIISRL--PKQRRTGLFSATQTEGVEELAKAGLRNPVRVEV 228
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 185 (70.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 54/178 (30%), Positives = 93/178 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLGFRAVIVCPTRELAKQTYNETVRLSEG 107
GR + A TGSGKTAAF +P++ +L P+ L F +++ PTRELA Q L
Sbjct: 83 GRDVIGLAETGSGKTAAFALPMLQALMEAPQTL-F-GLVLAPTRELAYQISQAFETLGST 140
Query: 108 LGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDE 166
+G+R A ++G + A+ +K +++ TP +L+ L+ + +L N+++L +DE
Sbjct: 141 IGVRCAVIVGGMDMVAQSIA--LGKKPHIIVATPGRLLDHLE-NTKGFSLRNLKYLAIDE 197
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
+D+L + D++ I P + +FSAT + V R L V+++V
Sbjct: 198 ADRLLDMDFGESLDKIIRIL-----PRTRHTYLFSATMSTKVESLQRASLSNPVRVSV 250
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 187 (70.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 59/190 (31%), Positives = 97/190 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-------HSLRGPKNLGFRAVIVCPTRELAKQTYNET 101
GR + A TGSGKT F++P+I +SL +N G +I+CP+RELAKQT+
Sbjct: 214 GRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEII 273
Query: 102 VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVL-------ITTPNKLVYLLQMDPPAL 154
S+ L +A + +I+ G ++ DV+ + TP +L+ +L D L
Sbjct: 274 QHYSKHL--QACGMPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDML--DKKIL 329
Query: 155 NLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRK 214
L +L +DE+D++ + G F + + I++ G + +FSAT + + + R
Sbjct: 330 TLDMCRYLCMDEADRMIDMG---FEEDVRTIFSFFKGQR-QTLLFSATMPKKIQNFARSA 385
Query: 215 LKRRVQINVG 224
L + V INVG
Sbjct: 386 LVKPVTINVG 395
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 184 (69.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 59/178 (33%), Positives = 98/178 (55%)
Query: 52 IFACAPTGSGKTAAFLIPIIHSLRGPKN---LGFRAVIVCPTRELAKQTYNETVRLSEGL 108
+ A A TG+GKTAAF++P + L P G R +++ PTRELA+Q + VR + G
Sbjct: 41 LLATAQTGTGKTAAFVLPALQRLSSPPQGPGRGPRVLVLTPTRELAQQV-TDAVR-TYGA 98
Query: 109 GLRAH---VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVD 165
+R ++G + A+ SA D ++ TP +LV LL D +L+L+ +E L++D
Sbjct: 99 FMRVRSGAILGGMPYHAQ-LRLLSAP-VDFIVATPGRLVDLL--DRRSLDLSRLELLVLD 154
Query: 166 ESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
E+D++ + G F D + I AA S + +F+AT +A+ R L+ +I++
Sbjct: 155 EADRMLDMG---FSDDVDRI-AAASPATRQTLLFTATMDSAMARLAGRLLREPERIDI 208
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 52/175 (29%), Positives = 89/175 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ + A A G+GKT A+ IP++ + K+ +A+++ PTRELA QT + L++ L
Sbjct: 95 GKDVLARAKNGTGKTGAYCIPVLEQIDPTKDY-IQALVMVPTRELALQTSQICIELAKHL 153
Query: 109 GLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESD 168
+R V + R QK ++I TP +++ L MD ++++ L++DE+D
Sbjct: 154 DIRVMVTTGGTILKDDI-LRIYQKVQLIIATPGRILDL--MDKKVADMSHCRILVLDEAD 210
Query: 169 KLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
KL +G D VI P + +FSAT V + + L+ +IN+
Sbjct: 211 KLLSLDFQGMLDH--VILKLPKDPQIL--LFSATFPLTVKNFMEKHLREPYEINL 261
>UNIPROTKB|F1NM06 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:AADN02026504
EMBL:AADN02026505 EMBL:AADN02026506 EMBL:AADN02026507
EMBL:AADN02026508 EMBL:AADN02026509 EMBL:AADN02026510
IPI:IPI00573288 ProteinModelPortal:F1NM06
Ensembl:ENSGALT00000005588 Uniprot:F1NM06
Length = 690
Score = 187 (70.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 64/217 (29%), Positives = 112/217 (51%)
Query: 17 VISIIVTTLAVVS-NSIFKHFEPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLR 75
+I+ I T L + S S+ K TI L G+ + TGSGKT A+ IP++ SL+
Sbjct: 107 LIATITTVLKICSMTSVQKQ-----TIPVLLQ-GKDALVRSQTGSGKTLAYGIPLVQSLQ 160
Query: 76 GPKNL-----GFRAVIVCPTRELAKQTYNETVRLSEGLG--LRAHVIGKIQQAAEKFGPR 128
G ++ G A+++ PTRELA QT++ +L + + ++G ++ +EK R
Sbjct: 161 GMQSKIQRSDGPYALVLVPTRELALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEK--AR 218
Query: 129 SAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAA 188
+ ++LI+TP +LV ++ ++ +WLI+DE+D++ + G F + VI A
Sbjct: 219 LRKGINILISTPGRLVDHIK-STECIHFRRTQWLIIDEADRILDLG---FEKDVTVILNA 274
Query: 189 CSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINV 223
+ R + SAT TE V + L ++I++
Sbjct: 275 LNAERETRQNVLLSATLTEGVTRLADISLNDPIRISI 311
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 69/217 (31%), Positives = 106/217 (48%)
Query: 25 LAVVSNSIFKHFEPHFTITYLSPLGRQ-IFACAPTGSGKTAAFLIPIIHSLR-------- 75
L VV + F+ P T L R+ + A A TGSGKT AFL+P++ L+
Sbjct: 19 LQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETPW 78
Query: 76 GPKNLGFRAVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKI----QQAAEKFGPRSAQ 131
GPK +G A+++ PTRELA+Q + E L H+ ++ E +
Sbjct: 79 GPKEIG--ALVISPTRELARQISEVLAQFLEHEDLE-HLNQQLIVGGNSIEEDIATLRRE 135
Query: 132 KFDVLITTPNKLVYLLQMDPPALNLA----NVEWLIVDESDKLFEAGVRGFRDQLAVIYA 187
+L+ TP +L L Q LNLA ++E+L++DE+D+L + G F+ + I
Sbjct: 136 TPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLG---FKTSVNNILG 192
Query: 188 ACSGPNLKR-GMFSATHTEDVAKWCRRKLKRRVQINV 223
P +R G+FSAT T +V R L+ V ++V
Sbjct: 193 YL--PRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSV 227
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 183 (69.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/166 (32%), Positives = 87/166 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGF-RAVIVCPTRELAKQTYNETVR 103
GR + A A TGSGKTAAF +P++ L K+ G R +++ PTRELA+Q + +
Sbjct: 46 GRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLS 105
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ + ++ + +S + DVL+ TP +L+ LL + AL L V
Sbjct: 106 YASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLASN--ALKLTQVSAF 163
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDV 207
++DE+D++ G F ++L + AA P K+ + FSAT E+V
Sbjct: 164 VLDEADRMLSLG---FTEELEQVLAAL--PRQKQTLLFSATFPEEV 204
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 183 (69.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 54/166 (32%), Positives = 87/166 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR----GPKNLGF-RAVIVCPTRELAKQTYNETVR 103
GR + A A TGSGKTAAF +P++ L K+ G R +++ PTRELA+Q + +
Sbjct: 46 GRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLS 105
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ + ++ + +S + DVL+ TP +L+ LL + AL L V
Sbjct: 106 YASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVATPGRLLDLLASN--ALKLTQVSAF 163
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDV 207
++DE+D++ G F ++L + AA P K+ + FSAT E+V
Sbjct: 164 VLDEADRMLSLG---FTEELEQVLAAL--PRQKQTLLFSATFPEEV 204
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 185 (70.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 54/165 (32%), Positives = 87/165 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G I CA TG+GKT AF IPI+ L G A+I+ PTRELA Q + L + +
Sbjct: 126 GSDILGCARTGTGKTLAFAIPILQKL-SVDPYGIYALILTPTRELAFQIAEQFTALGKPI 184
Query: 109 GLRAHVI--GK--IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN--LANVEWL 162
L+ VI G+ I QA E +++ V++ TP +L L++ DP + +++
Sbjct: 185 TLKCSVIVGGRSLIHQAREL-----SERPHVVVATPGRLADLIESDPDTIAKVFKKIQFF 239
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDV 207
++DE+D++ E + DQL I+ + S + + SAT T ++
Sbjct: 240 VLDEADRMLEGQ---YNDQLKPIFESISEKR-QTLLLSATITNNI 280
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 186 (70.5 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 66/222 (29%), Positives = 106/222 (47%)
Query: 27 VVSNSIFKHFE-PHFTITYLSPL---GRQIFACAPTGSGKTAAFLIPIIHSL--RGPK-- 78
++SN ++ P Y P+ GR + ACA TGSGKT FL PI+ GP
Sbjct: 197 LISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAYQNGPAAP 256
Query: 79 ------NLGFR------AVIVCPTRELAKQTYNETVRLSEGLGLRAHVIGKIQQAAEKFG 126
G + ++I+ PTREL Q ++E + + +R V+ +
Sbjct: 257 PPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQL- 315
Query: 127 PRSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVI 185
R ++ D+L+ TP +LV L++ ++L N+++LI+DE+D++ + G F Q+ I
Sbjct: 316 -RQIERGCDLLVATPGRLVDLIERG--RISLVNIKYLILDEADRMLDMG---FEPQIRRI 369
Query: 186 YAACSGPNLKRG---MFSATHTEDVAKWCRRKLKRRVQINVG 224
PN+ MFSAT D+ R LK V ++VG
Sbjct: 370 VEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVG 411
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 187 (70.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 60/184 (32%), Positives = 96/184 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKTAAF+ P++ + K L G +I+ PTREL+ Q YNE +
Sbjct: 306 GRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKF 365
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ L +V+ K+ A Q ++++ TP +++ +++M A NL V +L
Sbjct: 366 GKVYNL--NVVC-CYGGGSKWEQSKALEQGAEIIVATPGRMIDMVKMK--ATNLRRVTFL 420
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSG--PNLKRGMFSATHTEDVAKWCRRKLKRRVQ 220
++DE+D++F G F Q+ I C+ P+ + MFSAT + + + R L V+
Sbjct: 421 VLDEADRMFHMG---FEPQVRSI---CNHVRPDRQCLMFSATFKKRIERLARDVLSDPVR 474
Query: 221 INVG 224
I G
Sbjct: 475 IVQG 478
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 185 (70.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 38 PHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTREL 93
PHF LS G+ I A TGSGKT AFL+P I+ L PKN G +I+ PTREL
Sbjct: 180 PHF----LS--GKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKN-GTGVLIISPTREL 232
Query: 94 AKQTYNETVRLSEGLG-LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP 152
Q Y L + + +IG + + EK + ++LI TP +L+ +Q
Sbjct: 233 CLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEK--KKFIHGINILIATPGRLLDHMQNTKE 290
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWC 211
+ N+ LI+DE+D+L + G F +++ +I P ++ +FSAT T V
Sbjct: 291 FI-YKNLICLIIDEADRLLQIG---FEEEINLIIKRL--PKKRQTALFSATQTTKVESLI 344
Query: 212 RRKLKRRVQINV 223
R L++ + I V
Sbjct: 345 RLSLQKPIFIEV 356
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 185 (70.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 38 PHFTITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTREL 93
PHF LS G+ I A TGSGKT AFL+P I+ L PKN G +I+ PTREL
Sbjct: 180 PHF----LS--GKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKN-GTGVLIISPTREL 232
Query: 94 AKQTYNETVRLSEGLG-LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP 152
Q Y L + + +IG + + EK + ++LI TP +L+ +Q
Sbjct: 233 CLQIYQVCKDLCKYIPQTNGIIIGGMSRNEEK--KKFIHGINILIATPGRLLDHMQNTKE 290
Query: 153 ALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWC 211
+ N+ LI+DE+D+L + G F +++ +I P ++ +FSAT T V
Sbjct: 291 FI-YKNLICLIIDEADRLLQIG---FEEEINLIIKRL--PKKRQTALFSATQTTKVESLI 344
Query: 212 RRKLKRRVQINV 223
R L++ + I V
Sbjct: 345 RLSLQKPIFIEV 356
>TAIR|locus:2064844 [details] [associations]
symbol:AT2G40700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HOGENOM:HOG000268799
EMBL:AJ010468 IPI:IPI00518934 PIR:G84832 PIR:T51746
RefSeq:NP_181602.1 UniGene:At.47 ProteinModelPortal:Q7XJN0
SMR:Q7XJN0 STRING:Q7XJN0 PaxDb:Q7XJN0 PRIDE:Q7XJN0
EnsemblPlants:AT2G40700.1 GeneID:818665 KEGG:ath:AT2G40700
GeneFarm:934 TAIR:At2g40700 InParanoid:Q7XJN0 OMA:HRFHWIV
PhylomeDB:Q7XJN0 ProtClustDB:CLSN2683635 Genevestigator:Q7XJN0
GermOnline:AT2G40700 Uniprot:Q7XJN0
Length = 609
Score = 185 (70.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/133 (36%), Positives = 74/133 (55%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PK---NLGFRAVIVCPTRELAKQTYNETVR 103
GR + APTG+GKT A+L P+IH L+G PK + G A+++ PTREL Q Y +
Sbjct: 67 GRDVLVNAPTGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEK 126
Query: 104 LSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L + +V+G ++A EK R + +LI TP +L+ L+ ++ N+ W
Sbjct: 127 LLHRFHWIVPGYVMGGEKKAKEK--ARLRKGISILIATPGRLLDHLKNTASFVH-KNLRW 183
Query: 162 LIVDESDKLFEAG 174
+I DE+D + E G
Sbjct: 184 VIFDEADSILELG 196
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 182 (69.1 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/139 (34%), Positives = 75/139 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLG--FRAVIVCPTRELAKQTYNETVRLS 105
GR + A APTG+GKTAAF+IP + L P+ R +I+ PTRELA Q + L+
Sbjct: 40 GRDVLASAPTGTGKTAAFVIPALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALA 99
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ L I G +Q ++ A D+++ TP +L L +D + +EWLI+
Sbjct: 100 KNTRLNIFTITGGVQY--QEHADILATTQDIVVATPGRL--LEYIDAERFDCRAIEWLIL 155
Query: 165 DESDKLFEAGVRGFRDQLA 183
DE+D++ + G D+L+
Sbjct: 156 DEADRMLDMGFGPTVDRLS 174
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 182 (69.1 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/139 (34%), Positives = 75/139 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-PKNLG--FRAVIVCPTRELAKQTYNETVRLS 105
GR + A APTG+GKTAAF+IP + L P+ R +I+ PTRELA Q + L+
Sbjct: 40 GRDVLASAPTGTGKTAAFVIPALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALA 99
Query: 106 EGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
+ L I G +Q ++ A D+++ TP +L L +D + +EWLI+
Sbjct: 100 KNTRLNIFTITGGVQY--QEHADILATTQDIVVATPGRL--LEYIDAERFDCRAIEWLIL 155
Query: 165 DESDKLFEAGVRGFRDQLA 183
DE+D++ + G D+L+
Sbjct: 156 DEADRMLDMGFGPTVDRLS 174
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 181 (68.8 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 54/186 (29%), Positives = 97/186 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGP-KNLG-------FRAVIVCPTRELAKQTYNE 100
G+ I A A TG+GKTA+F++P++ L K G RA+I+ PTRELA Q
Sbjct: 38 GKDIIAAAQTGTGKTASFVLPLLEQLNSQYKETGKKLRAKRIRALILVPTRELAVQVEAS 97
Query: 101 TVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANV 159
+ ++ L + + + G + +K R D+L+ TP +L+ + L+ +
Sbjct: 98 ISQYAKYLDISSMAMYGGVDAQEQK--QRLIWGVDILVATPGRLLDMTHQR--VLHFDEL 153
Query: 160 EWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRR 218
+ L++DE+D++ + G F D + I P ++ + FSAT +E+V +R + +
Sbjct: 154 DMLVLDEADRMLDMG---FIDDINKIIERL--PEHRQNLLFSATMSEEVRGLAKRTIHKP 208
Query: 219 VQINVG 224
V+I++G
Sbjct: 209 VEISIG 214
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 186 (70.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 58/182 (31%), Positives = 94/182 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKT AFL+P I+H P ++ G +++ PTRELA Q ET +
Sbjct: 421 GRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKF 480
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQK--FDVLITTPNKLVYLLQMDPPALNLANVEWL 162
G ++ + A K +A K +++I TP +L+ +L+ NL V +L
Sbjct: 481 G-GTSQISNTC--VYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKT--NLRRVTYL 535
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQIN 222
++DE+D++ + G F Q+ I + P+ + MFSAT ++V L +Q++
Sbjct: 536 VLDEADRMLDMG---FEPQIRKIISQIR-PDRQTLMFSATWPKEVQALAHDFLTDHIQVH 591
Query: 223 VG 224
+G
Sbjct: 592 IG 593
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 185 (70.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 57/184 (30%), Positives = 97/184 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG-----PKNLGFRAVIVCPTRELAKQTYNETVR 103
GR + TGSGKT A+ IP++ SL+ ++ G A+++ PTRELA Q+++ +
Sbjct: 141 GRDALVRSQTGSGKTLAYCIPVVQSLQALTSKIQRSDGPYALVLVPTRELALQSFDTVQK 200
Query: 104 LSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L + + ++G ++ +EK R + ++LI+TP +LV ++ ++ V W
Sbjct: 201 LLKPFTWIVPGVLMGGEKRKSEK--ARLRKGINILISTPGRLVDHIK-STKNIHFNRVRW 257
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRV 219
L+VDE+D++ + G F + VI A + KR + SAT TE V + L V
Sbjct: 258 LVVDEADRILDLG---FEKDVTVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHNPV 314
Query: 220 QINV 223
I+V
Sbjct: 315 SISV 318
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 187 (70.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 55/183 (30%), Positives = 94/183 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ ++ + L G A+I+ PTRELA Q + E
Sbjct: 455 GRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPF 514
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL-NLANVEWLI 163
+ L +RA ++ + ++++ TP +++ +L + + NL +L+
Sbjct: 515 LKLLNIRACCAYGGAPIKDQIADLK-RGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLV 573
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ G F Q+ I P+ + +FSAT + R+ LK+ V+I V
Sbjct: 574 LDEADRMFDLG---FEPQVMRIINNIR-PDRQTVLFSATFPRAMEALARKVLKKPVEITV 629
Query: 224 GLR 226
G R
Sbjct: 630 GGR 632
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 185 (70.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 58/184 (31%), Positives = 98/184 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVR 103
GR + TGSGKT A+ IP++ SL+ ++ G A+I+ PTRELA Q+++ +
Sbjct: 170 GRDALVRSQTGSGKTLAYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQSFDTVQK 229
Query: 104 LSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L + + ++G ++ +EK R + ++LI+TP +LV ++ ++ + W
Sbjct: 230 LLKPFTWIVPGVLMGGEKRKSEK--ARLRKGINILISTPGRLVDHIK-STKNIHFRQIRW 286
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRV 219
LI+DE+D++ + G F L VI A + +R + SAT TE VA+ L V
Sbjct: 287 LILDEADRILDLG---FEKDLTVILNAVNAECQERQNVLLSATLTEGVARLADISLHDPV 343
Query: 220 QINV 223
I+V
Sbjct: 344 SISV 347
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 182 (69.1 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 54/181 (29%), Positives = 95/181 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRG--PKNLGFR--AVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AF +P + + K R AV++ PTRELA Q Y++ V+
Sbjct: 110 GRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKF 169
Query: 105 SEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E + ++ A + G +++ ++ +SA V++ TP +L L Q D +L+L V++L+
Sbjct: 170 AEKVDIQVACIFGGVKKDEQREALKSAA---VVVATPGRLKDL-QNDG-SLDLGRVKYLV 224
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++ + +GF + I + + MF+AT V + V + +
Sbjct: 225 LDEADRMLD---KGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTI 281
Query: 224 G 224
G
Sbjct: 282 G 282
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 183 (69.5 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 54/208 (25%), Positives = 108/208 (51%)
Query: 26 AVVSNSIFKHFEPHFTITYLS-PL---GRQIFACAPTGSGKTAAFLIPII-HSLRGPKNL 80
+ + N + K FE + L P+ G + + TGSGKT +F++P I H L P+
Sbjct: 149 STIKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPAIEHILAQPRQS 208
Query: 81 ---GFRAVIVCPTRELAKQTYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVL 136
G ++V PTRELA Q E + + + A + G + +++ + +++ ++
Sbjct: 209 YYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQQL--QLSRRPKIV 266
Query: 137 ITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR 196
+ TP +++ M+ L+L N+ +L+VDE+D+L E G F Q+ I+ + P+ +
Sbjct: 267 VGTPGRIIDF--MESGDLSLKNISFLVVDEADRLMEMG---FEQQIDGIFNSIR-PDRQV 320
Query: 197 GMFSATHTEDVAKWCRRKLKRRVQINVG 224
+SAT + V+ + + ++ +++ +G
Sbjct: 321 LYWSATWPKKVSSFAEKHIRTPIRLQIG 348
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 185 (70.2 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 60/184 (32%), Positives = 97/184 (52%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
+G+ + A TGSGKTAAF++PI+ L PK + R VI+ PTRELA Q + +L+
Sbjct: 291 MGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQCHAVATKLA 350
Query: 106 EGLGLR-AHVIG----KIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
++ +G K+Q++ + P DV+I TP + + ++ + + + VE
Sbjct: 351 SHTDIKFCLAVGGLSLKVQESELRLRP------DVIIATPGRFIDHMR-NSASFAVDTVE 403
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLKRRV 219
L++DE+D++ E G F D+L I P ++ M FSAT T V R L + V
Sbjct: 404 ILVLDEADRMLEDG---FADELNEILTTL--PKSRQTMLFSATMTSSVDNLIRVGLNKPV 458
Query: 220 QINV 223
++ V
Sbjct: 459 RLMV 462
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 182 (69.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 53/177 (29%), Positives = 92/177 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TGSGKT AF +P++ SL +++ PTRELA Q + L +
Sbjct: 116 GRDVIGLAETGSGKTGAFAVPVLQSLLACAQR-LHTLVLTPTRELAFQIAEQFDALGSSI 174
Query: 109 GLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
G++ A ++G I ++ A+K V+I TP +L+ ++ + NL +++L++DE+
Sbjct: 175 GVKTAVIVGGIDMMSQALV--LAKKPHVVIATPGRLIDHME-NTKGFNLRALKYLVMDEA 231
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQINV 223
D++ D++ + P +R +FSAT T+ V K R L+ V+ +V
Sbjct: 232 DRILNMDFESEVDKILKVI-----PRDRRTFLFSATMTKKVQKLQRAALQDPVKCSV 283
>UNIPROTKB|G3V0G3 [details] [associations]
symbol:DDX56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 56,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
EMBL:CH471128 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC004938
UniGene:Hs.654762 HGNC:HGNC:18193 ProteinModelPortal:G3V0G3
SMR:G3V0G3 Ensembl:ENST00000421223 ArrayExpress:G3V0G3 Bgee:G3V0G3
Uniprot:G3V0G3
Length = 375
Score = 179 (68.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 55/168 (32%), Positives = 88/168 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG------FRAVIVCPTRELAKQTYNETV 102
G+ + A A TGSGKTAA+ IP++ L K G R +++ PT+ELA+Q +
Sbjct: 44 GKDLLARARTGSGKTAAYAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQ 103
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L+ V + A + R+ +K DV++ TP++++ LQ D L ++E
Sbjct: 104 QLATYCARDVRV-ANVSAAEDSVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLR-DSLE 161
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
L+VDE+D LF G F ++L + C P + + + SAT EDV
Sbjct: 162 LLVVDEADLLFSFG---FEEELKSLL--CHLPRIYQAFLMSATFNEDV 204
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 183 (69.5 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 60/189 (31%), Positives = 96/189 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL----GFR-----AVIVCPTRELAKQTYN 99
GR + ACA TGSGKTAAF PII + +++ G R AVI+ PTRELA Q ++
Sbjct: 183 GRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHD 242
Query: 100 ETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLAN 158
E + S G++ V ++ R ++ D+L+ TP +L LL+ +L +
Sbjct: 243 EARKFSYQTGVKVVVAYGGTPVNQQI--RELERGVDILVATPGRLNDLLERGRVSLQM-- 298
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACS--GPNLKRGM-FSATHTEDVAKWCRRKL 215
V +L +DE+D++ + G F Q+ I P +++ M FSAT ++ + L
Sbjct: 299 VRFLALDEADRMLDMG---FEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFL 355
Query: 216 KRRVQINVG 224
+ + VG
Sbjct: 356 SNYIFLAVG 364
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 180 (68.4 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 60/182 (32%), Positives = 100/182 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFR--AVIVCPTRELAKQTYNETVRLSE 106
G+ + A A TGSGKTAAF I ++ L L FR A+++CPTRELA Q E RL+
Sbjct: 41 GKDVIARAKTGSGKTAAFGIGLLSRLDA---LSFRVQALVLCPTRELADQVGKELRRLAR 97
Query: 107 GL-GLRAHVI-GKIQQAAEKFGPR--SAQK-FDVLITTPNKLVYLLQMDPPALNLANVEW 161
++ I G + FGP+ S + V+I TP +L+ L+ +L+L+ +
Sbjct: 98 FTDNIKILTICGGVP-----FGPQLGSLEHGAHVVIGTPGRLLDHLRRG--SLDLSALRT 150
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ + G F+D ++ + AA P + +FSAT+ + +A + V++
Sbjct: 151 LVLDEADRMLDMG---FQDDISALIAAAP-PKRQTLLFSATYPDSIAAMSAGVQREPVEV 206
Query: 222 NV 223
+V
Sbjct: 207 SV 208
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 182 (69.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 65/188 (34%), Positives = 95/188 (50%)
Query: 33 FKHFEPHFTITYLSPL-GRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIV 87
FK P + L L G+ + A TGSGKT AFLIP I L P+N G +I+
Sbjct: 139 FKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRN-GTGVIII 197
Query: 88 CPTRELAKQTYNETVRLSEGLGLRAH--VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVY 145
PTRELA Q Y L + + H VIG + E+ R + ++L+ TP +L+
Sbjct: 198 SPTRELALQIYGVARELMK-YHTQTHGIVIGGASKKPEE--ERLEKGVNLLVATPGRLLD 254
Query: 146 LLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHT 204
LQ + N++ LI+DE+D++ E G F +++ I P ++ M FSAT T
Sbjct: 255 HLQ-NTKGFITKNLKCLIIDEADRILEVG---FEEEMHQIIKKV--PKTRQTMLFSATQT 308
Query: 205 ---EDVAK 209
+D+AK
Sbjct: 309 RKVDDIAK 316
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 183 (69.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 58/177 (32%), Positives = 86/177 (48%)
Query: 49 GRQIFACAPTGSGKTAAFLIPII-HSLR-GPKNLGFR------AVIVCPTRELAKQTYNE 100
GR + ACA TGSGKTAAFL+PI+ H +R G F+ +IV PTREL Q + E
Sbjct: 303 GRDLMACAQTGSGKTAAFLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLE 362
Query: 101 TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+ S G +R VI Q + Q ++L TP +L+ ++ + + L +
Sbjct: 363 ARKFSFGTCVRPVVIYGGTQLGHSIR-QIMQGCNILCATPGRLMDIIGKEK--IGLGQIR 419
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAK-WCRRKLK 216
+L++DE+D++ + G +L S + MFSAT K W LK
Sbjct: 420 YLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLK 476
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 182 (69.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/183 (30%), Positives = 92/183 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIH--SLRGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
GR I A A TGSGKT +LIP +H +R +G +++ PTRELA Q E V+
Sbjct: 195 GRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFG 254
Query: 106 EGLGLRAHVIGKIQQAAEKFGP--RSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEWL 162
+ + A K GP R ++ D+++ TP +L +L+M ++L + +L
Sbjct: 255 RSSRISCTCL---YGGAPK-GPQLRDLERGADIVVATPGRLNDILEMR--RISLRQISYL 308
Query: 163 IVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRKLKRRVQI 221
++DE+D++ + G F Q+ I P ++ M++AT + V K L Q+
Sbjct: 309 VLDEADRMLDMG---FEPQIRKIVKEI--PTKRQTLMYTATWPKGVRKIAADLLVNPAQV 363
Query: 222 NVG 224
N+G
Sbjct: 364 NIG 366
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 181 (68.8 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 56/178 (31%), Positives = 93/178 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
G+ I A TGSGKTAAF IPI+ SL + F A+++ PTREL Q + L +
Sbjct: 160 GKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYF-ALVLAPTRELTFQIKDTFDALGSSM 218
Query: 109 GLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDES 167
GLR+ ++G + + +K V++ TP +++ L+ +L N+++L++DE+
Sbjct: 219 GLRSSCIVGGMDMMDQ--ARDLMRKPHVIVATPGRIMDHLE-HTKGFSLKNLKYLVMDEA 275
Query: 168 DKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRVQINV 223
D+L + D++ + P +KR +FSAT T + K R L V++ V
Sbjct: 276 DRLLDMDFGPALDKILKVI-----P-IKRTTYLFSATMTNKIEKLQRASLHNPVRVAV 327
>UNIPROTKB|Q3SZ40 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
GeneTree:ENSGT00550000074946 HSSP:P60842 EMBL:BC103169
IPI:IPI00695179 RefSeq:NP_001029501.1 UniGene:Bt.48952
ProteinModelPortal:Q3SZ40 STRING:Q3SZ40 PRIDE:Q3SZ40
Ensembl:ENSBTAT00000014014 GeneID:508728 KEGG:bta:508728 CTD:54606
HOVERGEN:HBG051334 InParanoid:Q3SZ40 OrthoDB:EOG47H5PT
NextBio:20868656 Uniprot:Q3SZ40
Length = 546
Score = 181 (68.8 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 56/168 (33%), Positives = 90/168 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG------FRAVIVCPTRELAKQTYNETV 102
G+ + A A TGSGKTAA+ IP++ L K G RA+++ PT+ELA+Q +
Sbjct: 44 GKDLLARARTGSGKTAAYAIPMLQLLLHRKATGPVVEQAVRALVLVPTKELARQAQSMIQ 103
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L+ R + + A + R+ +K DV++ TP++++ LQ D L ++E
Sbjct: 104 QLAAYCA-RDIRVANVSAAEDSASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLR-DSME 161
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
L+VDE+D LF G F ++L + C P + + + SAT EDV
Sbjct: 162 LLVVDEADLLFSFG---FEEELKSLL--CHLPRIYQAFLMSATFNEDV 204
>UNIPROTKB|Q2KEF1 [details] [associations]
symbol:MGCH7_ch7g1085 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
GO:GO:0008026 ProteinModelPortal:Q2KEF1 Uniprot:Q2KEF1
Length = 568
Score = 181 (68.8 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 65/179 (36%), Positives = 92/179 (51%)
Query: 41 TITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSL-RGPKNLG--FRAVIVCPTRELAKQT 97
TI +L + A A TG+GKT AFL+P + +L R P + G +++ PTRELA Q
Sbjct: 107 TIRHLIADRGDVLAQAKTGTGKTIAFLLPALQTLLRRPSSRGNDVSVLVISPTRELALQI 166
Query: 98 YNETVRLSEGLGLR--AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALN 155
E L + L IG + AE+ R + +LI TP +L+ L+ A
Sbjct: 167 AKEAEALLQRLPQYKVCTAIGGTNKDAEQ--RRILRGCQILIGTPGRLMDHLEEQSVAEM 224
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR----GM-FSATHTEDVAK 209
L +V+ ++DE+D+L + G F QL I AA PN ++ GM FSAT E VAK
Sbjct: 225 LQSVDTFVLDEADRLLDMG---FMPQLKKIVAAL--PNRQKVPRQGMLFSATVAEHVAK 278
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 182 (69.1 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 60/197 (30%), Positives = 98/197 (49%)
Query: 37 EPHFTITYLSPLGRQIFACAPTGSGKTAAFLIPII-HSLRGPKNL--------GFR---- 83
+ H T L+ R + +CA TGSGKTAAFL+PII H L G ++ G R
Sbjct: 166 QKHSIPTLLA--NRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYP 223
Query: 84 -AVIVCPTRELAKQTYNETVRLSEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPN 141
A+++ PTRELA Q + E + S ++ ++ G + ++ R +LI TP
Sbjct: 224 CALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVN-RLRAGTHILIATPG 282
Query: 142 KLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR--GMF 199
+L+ +++ + LA +L++DE+D++ + G F Q+ I P R MF
Sbjct: 283 RLIDIIEQG--FIGLAGCRYLVLDEADRMLDMG---FEPQIRKIVGQGMPPKTARTTAMF 337
Query: 200 SATHTEDVAKWCRRKLK 216
SAT +++ + LK
Sbjct: 338 SATFPKEIQVLAKDFLK 354
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 183 (69.5 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + N++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETICFHATNLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + I P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAIIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 183 (69.5 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + N++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETICFHATNLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + I P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAIIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 183 (69.5 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + N++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETICFHATNLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + I P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAIIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>MGI|MGI:1277172 [details] [associations]
symbol:Ddx56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 56"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1277172 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
GeneTree:ENSGT00550000074946 CTD:54606 HOVERGEN:HBG051334
OrthoDB:EOG47H5PT EMBL:AK011136 EMBL:AK077514 EMBL:BC018291
IPI:IPI00132957 RefSeq:NP_080814.1 UniGene:Mm.29810
ProteinModelPortal:Q9D0R4 SMR:Q9D0R4 STRING:Q9D0R4
PhosphoSite:Q9D0R4 PaxDb:Q9D0R4 PRIDE:Q9D0R4
Ensembl:ENSMUST00000004507 GeneID:52513 KEGG:mmu:52513
InParanoid:Q9D0R4 ChiTaRS:DDX56 NextBio:309069 Bgee:Q9D0R4
CleanEx:MM_DDX56 Genevestigator:Q9D0R4
GermOnline:ENSMUSG00000004393 Uniprot:Q9D0R4
Length = 546
Score = 180 (68.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 56/168 (33%), Positives = 88/168 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG------FRAVIVCPTRELAKQTYNETV 102
G+ + A A TGSGKTAA+ IP++ SL K G R +++ PT+ELA+Q
Sbjct: 44 GKDLLARARTGSGKTAAYAIPMLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQ 103
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L+ V + A + R+ +K DV++ TP++++ LQ + L ++E
Sbjct: 104 QLAAYCARDVRV-ANVSAAEDSASQRAVLMEKPDVVVGTPSRVLSHLQQNTLKLR-DSLE 161
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
L+VDE+D LF G F D+L + C P + + + SAT EDV
Sbjct: 162 LLVVDEADLLFSFG---FEDELKSLL--CHLPRIYQAFLMSATFNEDV 204
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 181 (68.8 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 58/184 (31%), Positives = 93/184 (50%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLRG----PKNLGFRAVIVCPTRELAKQTYNETVR 103
+G + A TGSGKT AFLIP + L P+N G +++CPTRELA Q+Y
Sbjct: 190 MGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRN-GTGVLVICPTRELAIQSYGVAKE 248
Query: 104 LSEGLGLRAHVIGKIQQAAEKFGPRS---AQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
L L + +GK+ EK + A+ ++L+ TP +L+ L+ + N++
Sbjct: 249 L---LKYHSQTVGKVI-GGEKRKTEAEILAKGVNLLVATPGRLLDHLE-NTNGFIFKNLK 303
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKR-GMFSATHTEDVAKWCRRKLKRRV 219
+L++DE+D++ E + F + L I P ++ +FSAT + V R L V
Sbjct: 304 FLVMDEADRILE---QNFEEDLKKILNLL--PKTRQTSLFSATQSAKVEDLARVSLTSPV 358
Query: 220 QINV 223
I+V
Sbjct: 359 YIDV 362
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 178 (67.7 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 65/221 (29%), Positives = 113/221 (51%)
Query: 9 LGIFTIGFVISIIVTTLA-VVSNSIFKH-FEPHFTITYLSPLGRQIFACAPTGSGKTAAF 66
+GI + GF ++ L +++S F+H E S LG + A +G GKTA F
Sbjct: 46 VGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVF 105
Query: 67 LIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL-GLRAHVI--G-KIQQAA 122
++ + + P + +++C TRELA Q NE R S+ L +R V G I+Q
Sbjct: 106 VLSTLQQIE-PVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDM 164
Query: 123 EKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIVDESDKLFEAGVRGFRDQL 182
E F +S +++ TP +L L++ L + +V+ ++DE DKL E+ V RD +
Sbjct: 165 EAFKDKSKSPH-IVVATPGRLNALVR--EKILKVNSVKHFVLDECDKLLES-VDMRRD-I 219
Query: 183 AVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
++ A + P + MFSAT + ++ C++ ++ ++I V
Sbjct: 220 QEVFRA-TPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYV 259
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 180 (68.4 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 56/183 (30%), Positives = 92/183 (50%)
Query: 49 GRQIFACAPTGSGKTAAFLIP-IIHSLRGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
GR I + A TGSGKT AF++P ++H + + G +++ PTRELA+Q ++
Sbjct: 166 GRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Query: 105 SEGLGLRAHVIGKIQQAAEKFGP--RSAQK-FDVLITTPNKLVYLLQMDPPALNLANVEW 161
LGL+ + A K GP R ++ D+++ TP +L+ L D N+ +
Sbjct: 226 CHSLGLKMTCLFG---GASK-GPQARDLERGVDIVVATPGRLLDFL--DNGTTNMKKCSY 279
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQI 221
L++DE+D++ + G F Q+ I P+ + MFSAT ++V K +
Sbjct: 280 LVLDEADRMLDMG---FEPQIKKIIGQIR-PDRQTLMFSATWPKEVRALASDFQKDAAFL 335
Query: 222 NVG 224
NVG
Sbjct: 336 NVG 338
>UNIPROTKB|F1S0U0 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:CU326339
Ensembl:ENSSSCT00000006300 Uniprot:F1S0U0
Length = 784
Score = 182 (69.1 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 59/185 (31%), Positives = 98/185 (52%)
Query: 49 GRQIFACAPTGS-GKTAAFLIPIIHSLRG--PK---NLGFRAVIVCPTRELAKQTYNETV 102
GR + TGS GKT A+ IP++ SL+ PK G A+I+ PTRELA Q+++
Sbjct: 224 GRDALVRSQTGSEGKTLAYCIPMVQSLQAVKPKIQRGDGPYALILVPTRELALQSFDTVQ 283
Query: 103 RLSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L + + ++G ++ +EK R + ++LI+TP +LV ++ + +
Sbjct: 284 KLLKPFTWIVPGVLMGGEKRKSEK--ARLRKGINILISTPGRLVDHIK-STKNMRFCRIR 340
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSG--PNLKRGMFSATHTEDVAKWCRRKLKRR 218
WLI+DE+D+L + G F +A+I A + P + + SAT TE V + L
Sbjct: 341 WLILDEADRLLDLG---FEKDIALILNAVNAERPERQNVLLSATLTEGVTRLADISLHEP 397
Query: 219 VQINV 223
V+I+V
Sbjct: 398 VRISV 402
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 177 (67.4 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 52/180 (28%), Positives = 92/180 (51%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVRL 104
+ + A A TG+GKTAAF +PI+ L RA+++ PTRELA Q V+
Sbjct: 39 QDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKY 98
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G +R + G + A++ + DVLI TP +L+ L+ ALNL + L+
Sbjct: 99 AKGTDIRVGIAYGGVSIEAQQAVFNAG--IDVLIATPGRLLDHLRQG--ALNLNQLNTLV 154
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK--RRVQI 221
DE+D++ + G F D++ + + +FSAT + + + + L+ +R+++
Sbjct: 155 FDEADRMLDMG---FMDEIQAVLKQVPAQR-QTLLFSATLDDSIFSFSKNLLRDPKRIEV 210
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 177 (67.4 bits), Expect = 6.6e-13, P = 6.6e-13
Identities = 52/180 (28%), Positives = 92/180 (51%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVRL 104
+ + A A TG+GKTAAF +PI+ L RA+++ PTRELA Q V+
Sbjct: 39 QDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKY 98
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
++G +R + G + A++ + DVLI TP +L+ L+ ALNL + L+
Sbjct: 99 AKGTDIRVGIAYGGVSIEAQQAVFNAG--IDVLIATPGRLLDHLRQG--ALNLNQLNTLV 154
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLK--RRVQI 221
DE+D++ + G F D++ + + +FSAT + + + + L+ +R+++
Sbjct: 155 FDEADRMLDMG---FMDEIQAVLKQVPAQR-QTLLFSATLDDSIFSFSKNLLRDPKRIEV 210
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 181 (68.8 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 62/195 (31%), Positives = 98/195 (50%)
Query: 50 RQIFACAPTGSGKTAAFLIPIIHS--LRG------------PKNLGFRAVIVCPTRELAK 95
R + ACA TGSGKTAAFL PII L G P+ RA+++ PTRELA+
Sbjct: 285 RDLMACAQTGSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQ 344
Query: 96 QTYNETVRLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPA 153
Q ++E + S G + + VI AE F + + D+L+ T +LV LL
Sbjct: 345 QIFDEANKFSYGSPVSSVVI---YGGAEVFHQINELDRGCDILVATTGRLVDLLMRG--R 399
Query: 154 LNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG---MFSATHTEDVAKW 210
++L+ +++L++DE+D++ + G F Q+ I + P + MFSAT + +
Sbjct: 400 VSLSKIKYLVLDEADRMLDMG---FEPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNL 456
Query: 211 CRRKLKRRVQINVGL 225
L + + VG+
Sbjct: 457 AADFLYNYIFLKVGV 471
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 182 (69.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 58/176 (32%), Positives = 91/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL---GFRAVIVCPTRELAKQTYNETVRLS 105
GR + A TGSGKT AFLIP++ L + G A+I+ PTRELA QT+ ++
Sbjct: 107 GRDVLGAAKTGSGKTLAFLIPVLECLYREQWTAMDGLGALIISPTRELAYQTFEVLRKVG 166
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPA-LNLANVEW 161
+ A ++ GK ++ +EK + +++I TP +L L MD A + +++
Sbjct: 167 KNHEFSAGLVIGGKDLKDESEKI-----HRTNIIICTPGRL--LQHMDETATFHASDLHM 219
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D L I P ++ + FSAT T V R LK
Sbjct: 220 LVLDEADRILDMG---FADTLNAIVENL--PKSRQTLLFSATQTRSVKDLARLSLK 270
>UNIPROTKB|Q9NY93 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 GO:GO:0003723 EMBL:CH236960 EMBL:CH471128
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
CleanEx:HS_DDX21 CTD:54606 HOVERGEN:HBG051334 OrthoDB:EOG47H5PT
EMBL:AJ131712 EMBL:AF247666 EMBL:AL136700 EMBL:AK022774
EMBL:AK315363 EMBL:CR457213 EMBL:AC004938 EMBL:BC001235
IPI:IPI00302281 IPI:IPI00925037 RefSeq:NP_001244118.1
RefSeq:NP_061955.1 UniGene:Hs.654762 ProteinModelPortal:Q9NY93
SMR:Q9NY93 IntAct:Q9NY93 STRING:Q9NY93 PhosphoSite:Q9NY93
DMDM:20139238 SWISS-2DPAGE:Q9NY93 PaxDb:Q9NY93 PRIDE:Q9NY93
DNASU:54606 Ensembl:ENST00000258772 Ensembl:ENST00000431640
GeneID:54606 KEGG:hsa:54606 UCSC:uc003tlg.3 GeneCards:GC07M044571
HGNC:HGNC:18193 HPA:HPA019749 MIM:608023 neXtProt:NX_Q9NY93
PharmGKB:PA134916346 InParanoid:Q9NY93 PhylomeDB:Q9NY93
GenomeRNAi:54606 NextBio:57133 ArrayExpress:Q9NY93 Bgee:Q9NY93
CleanEx:HS_DDX56 Genevestigator:Q9NY93 GermOnline:ENSG00000136271
Uniprot:Q9NY93
Length = 547
Score = 179 (68.1 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 55/168 (32%), Positives = 88/168 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG------FRAVIVCPTRELAKQTYNETV 102
G+ + A A TGSGKTAA+ IP++ L K G R +++ PT+ELA+Q +
Sbjct: 44 GKDLLARARTGSGKTAAYAIPMLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQ 103
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L+ V + A + R+ +K DV++ TP++++ LQ D L ++E
Sbjct: 104 QLATYCARDVRV-ANVSAAEDSVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLR-DSLE 161
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
L+VDE+D LF G F ++L + C P + + + SAT EDV
Sbjct: 162 LLVVDEADLLFSFG---FEEELKSLL--CHLPRIYQAFLMSATFNEDV 204
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 46/131 (35%), Positives = 77/131 (58%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPII-HSLRGPKNL-GF-RAVIVCPTRELAKQTYNETVRL 104
+G+ + A APTG+GKTAAFL+PI H L P+ GF R +I+ PTRELA Q ++ +L
Sbjct: 49 VGKDVLASAPTGTGKTAAFLLPIAQHLLDYPRTKPGFPRVLILTPTRELAIQIGEDSEQL 108
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+E ++ VI G + + S D+L+ TP +L+ ++ + + +E L+
Sbjct: 109 TELTKIKTGVITGGVNYGSHADILTSTT--DILVATPGRLLEYIENEQ--FDAREIEILV 164
Query: 164 VDESDKLFEAG 174
+DE+D++ + G
Sbjct: 165 LDEADRMLDLG 175
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 177 (67.4 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 59/188 (31%), Positives = 93/188 (49%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLR-----GPKNL--GF-RAVIVCPTRELAKQTYNE 100
GR + A A TGSGKTA F +P++ LR G KN F +++ PTRELAKQ +
Sbjct: 45 GRDLIAGANTGSGKTATFALPMLQKLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADS 104
Query: 101 ----TVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNL 156
V + + A V G + + R D+L+ TP +L+ L+ + A+ L
Sbjct: 105 IKSYAVHFNGEIKTLA-VFGGVSVNIQMLALRGG--VDILVATPGRLLDLISSN--AIKL 159
Query: 157 ANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKL 215
V+ L++DE+D++ G F ++L + A P K+ + FSAT E V + L
Sbjct: 160 DKVKTLVLDEADRMLSLG---FTEELTALLALT--PKKKQTLLFSATFPEQVTTLTQELL 214
Query: 216 KRRVQINV 223
++I +
Sbjct: 215 NNPIEIQL 222
>ZFIN|ZDB-GENE-061013-64 [details] [associations]
symbol:ddx28 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
28" species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-061013-64 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 CTD:55794
HOGENOM:HOG000008689 HOVERGEN:HBG081424 OrthoDB:EOG42RD7H
EMBL:BC124668 IPI:IPI00805270 RefSeq:NP_001070800.1
UniGene:Dr.84136 ProteinModelPortal:Q08BL1 GeneID:768189
KEGG:dre:768189 InParanoid:Q08BL1 NextBio:20918504
ArrayExpress:Q08BL1 Uniprot:Q08BL1
Length = 558
Score = 179 (68.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 45/138 (32%), Positives = 75/138 (54%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG----FRAVIVCPTRELAKQTYNETVRL 104
GR I A TGSGKT +L+PIIH L+ G RAV++ P+RELA+Q + +
Sbjct: 188 GRNILCAAETGSGKTLTYLLPIIHRLQEDLLAGSERSIRAVVIVPSRELAEQVNSVARSV 247
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
SE GL V+G + + + D+L++TP L+ L ++L+ + +L++
Sbjct: 248 SERFGLVVKVVGGGRGVGTIKAAFARGQPDILVSTPGALLKALWKR--FISLSELYFLVI 305
Query: 165 DESDKLFEAGVRGFRDQL 182
DE+D +F+ G +++
Sbjct: 306 DEADTMFDDSFAGMLEKI 323
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 181 (68.8 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 51/140 (36%), Positives = 81/140 (57%)
Query: 47 PLG---RQIFACAPTGSGKTAAFLIPIIHSLRG-PK-------NLGFRAVIVCPTRELAK 95
P+G R I A TGSGKTAAFLIP++ + PK + G A+I+ PTRELA+
Sbjct: 423 PIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQ 482
Query: 96 QTYNETVRLSEGLGLR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPAL 154
Q ET++ + LG+R VIG I + + F R +++I TP +L+ +L+ L
Sbjct: 483 QIEEETIKFGKPLGIRPVAVIGGISREDQGF--RLRMGCEIVIATPGRLIDVLENR--YL 538
Query: 155 NLANVEWLIVDESDKLFEAG 174
L+ ++++DE+D++ + G
Sbjct: 539 VLSRCTYVVLDEADRMIDMG 558
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 180 (68.4 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 62/188 (32%), Positives = 95/188 (50%)
Query: 44 YLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF--------RAVIVCPTRE 92
Y PL G+ I ACA TGSGKTAAFL+PI+ L K+L + R +I+ PTRE
Sbjct: 327 YTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRE 386
Query: 93 LAKQTYNETVRLSEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
LA Q YNE + S + V G I K + + +++ T ++ + +
Sbjct: 387 LADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK--SQIMKGCTIIVGTIGRVKHFCE--D 442
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP-NLKRG--MFSATHTEDVA 208
A+ L +L++DE+D++ ++ GF ++ I + P N KR MFSAT V
Sbjct: 443 GAIKLDKCRYLVLDEADRMIDS--MGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQ 500
Query: 209 KWCRRKLK 216
+ R+ L+
Sbjct: 501 EAARKLLR 508
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 180 (68.4 bits), Expect = 8.9e-13, P = 8.9e-13
Identities = 62/188 (32%), Positives = 95/188 (50%)
Query: 44 YLSPL---GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGF--------RAVIVCPTRE 92
Y PL G+ I ACA TGSGKTAAFL+PI+ L K+L + R +I+ PTRE
Sbjct: 327 YTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRE 386
Query: 93 LAKQTYNETVRLSEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDP 151
LA Q YNE + S + V G I K + + +++ T ++ + +
Sbjct: 387 LADQIYNEGRKFSYQSVMEIKPVYGGINVGYNK--SQIMKGCTIIVGTIGRVKHFCE--D 442
Query: 152 PALNLANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGP-NLKRG--MFSATHTEDVA 208
A+ L +L++DE+D++ ++ GF ++ I + P N KR MFSAT V
Sbjct: 443 GAIKLDKCRYLVLDEADRMIDS--MGFGPEIEQIINYKNMPKNDKRQTMMFSATFPSSVQ 500
Query: 209 KWCRRKLK 216
+ R+ L+
Sbjct: 501 EAARKLLR 508
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 181 (68.8 bits), Expect = 9.2e-13, P = 9.2e-13
Identities = 55/176 (31%), Positives = 90/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSADGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + N++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETICFHATNLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + I P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAIIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 176 (67.0 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 53/178 (29%), Positives = 93/178 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSEGL 108
GR + A TG+GKTAAF +PI+H L+ + RA+++ PTRELA+Q + V L
Sbjct: 38 GRDVMGLAQTGTGKTAAFALPILHRLQQGERGRVRALVIAPTRELAEQINDSFVTLGRQT 97
Query: 109 GLRA-HVIGKIQQAAEKFGPRSAQKFDVLITTPNKLV-YLLQMDPPALNLANVEWLIVDE 166
LR+ V G + + ++ +V++ P +L+ ++ Q ++L+ +E L++DE
Sbjct: 98 RLRSVTVYGGVGVNPQVQKLKAGA--EVVVACPGRLLDHIAQ---GTIDLSRLEVLVLDE 152
Query: 167 SDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
+D++F+ G F + + P + +FSAT D+ + L V + VG
Sbjct: 153 ADQMFDMG---FLPDIRRVLKHLP-PRRQTLLFSATMPIDIRTLAQDILVDPVTVQVG 206
>UNIPROTKB|F8WAJ0 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AL160165 HGNC:HGNC:16715
IPI:IPI01010837 ProteinModelPortal:F8WAJ0 SMR:F8WAJ0
Ensembl:ENST00000438527 ArrayExpress:F8WAJ0 Bgee:F8WAJ0
Uniprot:F8WAJ0
Length = 722
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 55/184 (29%), Positives = 97/184 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVR 103
GR + TGSGKT A+ IP++ SL+ ++ G A+++ PTRELA Q+++ +
Sbjct: 139 GRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQK 198
Query: 104 LSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L + + ++G ++ +EK R + ++LI+TP +LV ++ ++ + + W
Sbjct: 199 LLKPFTWIVPGVLMGGEKRKSEK--ARLRKGINILISTPGRLVDHIK-STKNIHFSRLRW 255
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRV 219
L+ DE+D++ + G F + VI A + KR + SAT TE V + L V
Sbjct: 256 LVFDEADRILDLG---FEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPV 312
Query: 220 QINV 223
I+V
Sbjct: 313 SISV 316
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/180 (32%), Positives = 92/180 (51%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPIIHSLR-GPKNLGF-RAVIVCPTRELAKQTYNETVRLS 105
+G + A TG+GKTAAF++P+I L G R +I+CPTRELA Q +
Sbjct: 40 MGGDVTGVAQTGTGKTAAFVLPMIQRLSTGRARARMPRCLILCPTRELAAQVAENFEKYG 99
Query: 106 EGLGLR-AHVIGKIQ-QAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
+ L L A +IG + + E R DVLI TP +L+ Q D L + VE LI
Sbjct: 100 KYLKLTMALLIGGVSFKEQETLLQRGV---DVLIATPGRLMD--QFDRGKLLMMGVETLI 154
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR--RKLKRRVQI 221
+DE+D++ + G F + I A N + +FSAT D+ + + +K +++++
Sbjct: 155 IDEADRMLDMG---FIPDIEKICAKLPA-NRQTLLFSATFPTDIQRLAKTFQKDPKKIEV 210
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 178 (67.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 57/182 (31%), Positives = 97/182 (53%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
LGR + A A TGSGKTAAFL+P+I +L K+ +++ PTRELA Q + L
Sbjct: 240 LGRDVLASADTGSGKTAAFLLPVILRALSQSKSPS--GLVLTPTRELAIQIERQAKELMS 297
Query: 107 GLG-LR-AHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL LR A ++G + ++ R Q+ V+I TP +L+ +++ ++ L +++ ++V
Sbjct: 298 GLPCLRTALLVGGLPAPPQRH--RLRQRIQVIIATPGRLLDIIKQR--SVELGSIKIVVV 353
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D + + G F+ Q+ + + + + SAT V + + L+ V I G
Sbjct: 354 DEADTMLKMG---FQQQVLDVLEQLPH-DCQTVLASATIPASVEQLACQLLRDPVAITAG 409
Query: 225 LR 226
R
Sbjct: 410 ER 411
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 178 (67.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 59/191 (30%), Positives = 94/191 (49%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---------RGPKNLGFRAVIVCPTRELAKQTYN 99
GR + ACA TGSGKTAAF PII + RG + + AVI+ PTRELA Q ++
Sbjct: 196 GRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHD 255
Query: 100 ETVRLSEGLGLRAHVIGKIQQAAEKFGPRSAQK-FDVLITTPNKLVYLLQMDPPALNLAN 158
E + S G++ V ++ R ++ D+L+ TP +L LL+ ++ +
Sbjct: 256 EAKKFSYQTGVKVVVAYGGTPINQQL--RELERGVDILVATPGRLNDLLERARVSMQM-- 311
Query: 159 VEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-----MFSATHTEDVAKWCRR 213
+ +L +DE+D++ + G F Q+ I P RG +FSAT ++ +
Sbjct: 312 IRFLALDEADRMLDMG---FEPQIRKIVEQMDMP--PRGVRQTLLFSATFPREIQRLAAD 366
Query: 214 KLKRRVQINVG 224
L + + VG
Sbjct: 367 FLANYIFLAVG 377
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 61/183 (33%), Positives = 97/183 (53%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHS-LRGP------KNLGFRAVIVCPTRELAKQTYNET 101
G+ I A A TG+GKT AFL+P I + ++ P ++ ++VCPTRELA Q E
Sbjct: 117 GKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEA 176
Query: 102 ---VRLSEGLGLRAHVIGKIQQAAEKFGPRSAQKF--DVLITTPNKLV-YLLQMDPPALN 155
++ +G++ VIG + E+ R QK +L+ TP +L ++ A
Sbjct: 177 NILLKYHPSIGVQV-VIGGTKLPTEQ---RRLQKSPCQILVATPGRLKDHIDNTSGFATR 232
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDVAKWCRRK 214
L V+ L++DE+D L + G FR ++ I AA P ++ +FSAT +++V + C
Sbjct: 233 LMGVKVLVLDEADHLLDMG---FRREIERIIAAV--PKQRQTFLFSATVSDEVRQICHVA 287
Query: 215 LKR 217
LKR
Sbjct: 288 LKR 290
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 180 (68.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/181 (28%), Positives = 94/181 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPK----NLGFRAVIVCPTRELAKQTYNETVRL 104
GR + A TGSGKT AFL+P+ ++ + N G +I+ PTRELA Q + +
Sbjct: 415 GRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPF 474
Query: 105 SEGLGLRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEWLI 163
+ LGLRA ++ + ++++ T +++ LL + ++L +++
Sbjct: 475 LKTLGLRAVCAYGGPPIKDQIADLK-RGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIV 533
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINV 223
+DE+D++F+ G F Q+ I+A P+ + +FSAT + + ++ LK V+I V
Sbjct: 534 LDEADRMFDMG---FEPQVMKIFANVR-PDRQTVLFSATMPKIMDALVKKVLKNPVEIEV 589
Query: 224 G 224
G
Sbjct: 590 G 590
>UNIPROTKB|Q9H8H2 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
EMBL:AF427339 EMBL:AF335567 EMBL:AF335568 EMBL:AF335569
EMBL:AK023695 EMBL:AK027002 EMBL:AK027484 EMBL:AL160165
EMBL:BC012726 IPI:IPI00043990 IPI:IPI00291296 IPI:IPI00552374
IPI:IPI00552716 RefSeq:NP_073616.6 RefSeq:NP_619526.1
UniGene:Hs.660767 ProteinModelPortal:Q9H8H2 SMR:Q9H8H2
IntAct:Q9H8H2 PhosphoSite:Q9H8H2 DMDM:71153334 SWISS-2DPAGE:Q9H8H2
PaxDb:Q9H8H2 PRIDE:Q9H8H2 DNASU:64794 Ensembl:ENST00000310532
Ensembl:ENST00000372153 Ensembl:ENST00000372155
Ensembl:ENST00000372159 GeneID:64794 KEGG:hsa:64794 UCSC:uc004cbq.1
UCSC:uc004cbs.2 UCSC:uc010mzu.1 CTD:64794 GeneCards:GC09M135468
HGNC:HGNC:16715 HPA:HPA020891 neXtProt:NX_Q9H8H2 PharmGKB:PA27218
HOVERGEN:HBG103793 InParanoid:Q9H8H2 OMA:ARIGCHG OrthoDB:EOG42V8FK
PhylomeDB:Q9H8H2 GenomeRNAi:64794 NextBio:66862 ArrayExpress:Q9H8H2
Bgee:Q9H8H2 CleanEx:HS_DDX31 Genevestigator:Q9H8H2
GermOnline:ENSG00000125485 Uniprot:Q9H8H2
Length = 851
Score = 179 (68.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 55/184 (29%), Positives = 97/184 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNL-----GFRAVIVCPTRELAKQTYNETVR 103
GR + TGSGKT A+ IP++ SL+ ++ G A+++ PTRELA Q+++ +
Sbjct: 268 GRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQSFDTVQK 327
Query: 104 LSEGLG--LRAHVIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEW 161
L + + ++G ++ +EK R + ++LI+TP +LV ++ ++ + + W
Sbjct: 328 LLKPFTWIVPGVLMGGEKRKSEK--ARLRKGINILISTPGRLVDHIK-STKNIHFSRLRW 384
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG--MFSATHTEDVAKWCRRKLKRRV 219
L+ DE+D++ + G F + VI A + KR + SAT TE V + L V
Sbjct: 385 LVFDEADRILDLG---FEKDITVILNAVNAECQKRQNVLLSATLTEGVTRLADISLHDPV 441
Query: 220 QINV 223
I+V
Sbjct: 442 SISV 445
>UNIPROTKB|G3V6M5 [details] [associations]
symbol:Ddx56 "Protein Ddx56" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1303195
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:TFLMSAT GeneTree:ENSGT00550000074946 EMBL:CH473963
UniGene:Rn.39458 Ensembl:ENSRNOT00000006642 Uniprot:G3V6M5
Length = 546
Score = 176 (67.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 55/168 (32%), Positives = 87/168 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSLRGPKNLG------FRAVIVCPTRELAKQTYNETV 102
G+ + A A TGSGKTAA+ IP++ L K G R +++ PT+ELA+Q +
Sbjct: 44 GKDLLARARTGSGKTAAYAIPMLQLLLHKKATGPVMEQAVRGLVLVPTKELARQAQSMIQ 103
Query: 103 RLSEGLGLRAHVIGKIQQAAEKFGPRSA--QKFDVLITTPNKLVYLLQMDPPALNLANVE 160
+L+ V + A + R+ +K DV++ TP++++ LQ L ++E
Sbjct: 104 QLASYCARDVRV-ANVSAAEDSASQRAVLMEKPDVVVGTPSRILNHLQQKNLKLR-DSLE 161
Query: 161 WLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRG-MFSATHTEDV 207
L+VDE+D LF G F D+L + C P + + + SAT EDV
Sbjct: 162 LLVVDEADLLFSFG---FEDELKSLL--CHLPRIYQAFLMSATFNEDV 204
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 176 (67.0 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
LGR + A A TGSGKTAAFL+P+I +L K A+I+ PTRELA Q N+ L
Sbjct: 240 LGRDVLASADTGSGKTAAFLLPVITRALCESKTPS--ALILTPTRELAIQIENQAKELMS 297
Query: 107 GLGLRAHV--IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL V +G + + + R Q V+I TP +L+ +++ ++ L ++ ++V
Sbjct: 298 GLPRMKTVLLVGGLPLPPQLY--RLRQHVKVIIATPGRLLDIIKQS--SVELCGIKIVVV 353
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMF-SATHTEDVAKWCRRKLKRRVQINV 223
DE+D + + G F+ Q+ I PN + + SAT + + + L V+I
Sbjct: 354 DEADTMLKMG---FQQQVLDILEHV--PNDSQTILVSATIPTSIEQLASQLLHNPVRIIT 408
Query: 224 G 224
G
Sbjct: 409 G 409
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 173 (66.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 52/165 (31%), Positives = 86/165 (52%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL-RGP---KNLGFRAVIVCPTRELAKQTYNETVRL 104
G + A TG+GKTAAF +PII+ R K R++I+ PTRELA Q
Sbjct: 39 GNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDY 98
Query: 105 SEGLGLRAHVI-GKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLI 163
S+GLGL+ V+ G + + A+ D+L+ TP +L+ L++ +N +E +
Sbjct: 99 SDGLGLKTKVVYGGVGRQAQVDSIELG--LDILVATPGRLLDLIETGD--INFKALEVFV 154
Query: 164 VDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDV 207
+DE+D + + G F+D ++I P ++ + FSAT ++
Sbjct: 155 LDEADTMLDMGF--FKDVQSIISKL---PKSRQTLLFSATMPAEI 194
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 178 (67.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 53/176 (30%), Positives = 91/176 (51%)
Query: 49 GRQIFACAPTGSGKTAAFLIPIIHSL---RGPKNLGFRAVIVCPTRELAKQTYNETVRLS 105
G+ + A TGSGKT AFL+P++ +L + G +I+ PTRELA QT+ ++
Sbjct: 106 GKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVG 165
Query: 106 EGLGLRAHVI--GK-IQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPP-ALNLANVEW 161
+ A +I GK ++ AE+ ++L+ TP +L L MD + + +++
Sbjct: 166 KNHDFSAGLIIGGKDLKHEAERIN-----NINILVCTPGRL--LQHMDETVSFHATDLQM 218
Query: 162 LIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGM-FSATHTEDVAKWCRRKLK 216
L++DE+D++ + G F D + + P ++ + FSAT T+ V R LK
Sbjct: 219 LVLDEADRILDMG---FADTMNAVIENL--PKKRQTLLFSATQTKSVKDLARLSLK 269
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 176 (67.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 57/180 (31%), Positives = 94/180 (52%)
Query: 48 LGRQIFACAPTGSGKTAAFLIP-IIHSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
LGR I A A TGSGKTAAFL+P II + K A+I+ PTRELA Q + L
Sbjct: 239 LGRDILASADTGSGKTAAFLLPVIIRAFSEDKTPS--ALILTPTRELAIQIERQAKELMS 296
Query: 107 GLGLRAHV--IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL V +G + + + R Q V+I TP +L+ +++ +++L+ ++ ++V
Sbjct: 297 GLPRMKTVLLVGGLPLPPQLY--RLRQHVKVIIATPGRLLDIIKQS--SVSLSGIKIVVV 352
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCRRKLKRRVQINVG 224
DE+D + + G F+ Q+ + G + + + SAT + + + + L V+I G
Sbjct: 353 DEADTMLKMG---FQQQVLDVLEHTPG-DCQTILVSATIPDSIEQLTDQLLHNPVRIITG 408
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 176 (67.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 48 LGRQIFACAPTGSGKTAAFLIPII-HSLRGPKNLGFRAVIVCPTRELAKQTYNETVRLSE 106
LGR + A A TGSGKTAAFL+P+I +L K A+I+ PTRELA Q N+ L
Sbjct: 240 LGRDVLASADTGSGKTAAFLLPVITRALCESKTPS--ALILTPTRELAIQIENQAKELMS 297
Query: 107 GLGLRAHV--IGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPALNLANVEWLIV 164
GL V +G + + + R Q V+I TP +L+ +++ ++ L ++ ++V
Sbjct: 298 GLPRMKTVLLVGGLPLPPQLY--RLRQHVKVIIATPGRLLDIIKQS--SVELCGIKIVVV 353
Query: 165 DESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMF-SATHTEDVAKWCRRKLKRRVQINV 223
DE+D + + G F+ Q+ I PN + + SAT + + + L V+I
Sbjct: 354 DEADTMLKMG---FQQQVLDILEHV--PNDSQTILVSATIPTSIEQLASQLLHNPVRIIT 408
Query: 224 G 224
G
Sbjct: 409 G 409
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 177 (67.4 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 58/177 (32%), Positives = 89/177 (50%)
Query: 41 TITYLSPLGRQIFACAPTGSGKTAAFLIPIIHSLRGPK---NLGFRAVIVCPTRELAKQT 97
TI Y S G + A TGSGKT A +IP++ +L K + G A+I+ PTRELA QT
Sbjct: 106 TIAY-SLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQT 164
Query: 98 YNETVRLSEGLGLRAH-VIGKIQQAAEKFGPRSAQKFDVLITTPNKLVYLLQMDPPA-LN 155
++ + G VIG A E+ ++++ TP +L L MD A ++
Sbjct: 165 FSTINAVGAHHGFSCGLVIGGSDVAFER---NRISGINIIVCTPGRL--LQHMDENAQMS 219
Query: 156 LANVEWLIVDESDKLFEAGVRGFRDQLAVIYAACSGPNLKRGMFSATHTEDVAKWCR 212
+++ L++DE+D++ + G F QL I + +FSAT T +V CR
Sbjct: 220 CDSLQVLVLDEADRMLDMG---FSKQLNSIINNLPAER-QTLLFSATQTRNVKDLCR 272
WARNING: HSPs involving 485 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.140 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 226 0.00078 113 3 11 22 0.47 32
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 735
No. of states in DFA: 599 (64 KB)
Total size of DFA: 161 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.26u 0.08s 20.34t Elapsed: 00:00:12
Total cpu time: 20.31u 0.08s 20.39t Elapsed: 00:00:15
Start: Thu Aug 15 11:36:57 2013 End: Thu Aug 15 11:37:12 2013
WARNINGS ISSUED: 2