RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12980
(609 letters)
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 54.1 bits (129), Expect = 1e-07
Identities = 81/546 (14%), Positives = 146/546 (26%), Gaps = 159/546 (29%)
Query: 5 QIFV-------YNILLDLYGNSGNS------SYITVRSVVTNKEPYVFTYTNESLPRNEC 51
Q FV Y L+ YI R + N + VF N + R +
Sbjct: 80 QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-DNQVFAKYN--VSRLQP 136
Query: 52 PTAQINNLLEVISNTT------TGQAKPVLTRALGRLMTVK-----NITWRGIGHCEDSP 100
LLE+ G K + + V+ I W + +C +SP
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC-NSP 195
Query: 101 PPPVVKVKLENQVPLIR--------------NPIDHLEAISGE-------------LLVY 133
+ LE L+ N + +I E LLV
Sbjct: 196 -----ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 134 -HVPEDTFFDHEDGGTRKLKLHLMTMDRYVISNTTTGQAKPVLTRALGRLMTVKN----- 187
+V ++ + + L L T + V + + +T
Sbjct: 251 LNVQNAKAWNAFNLSCKIL---LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307
Query: 188 ITWRGIGHCEDSPP------PPVV------------------KVKLENQVPLIRNPIDHL 223
+ + +D P P + V + +I + ++ L
Sbjct: 308 LKYLDCR-PQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 224 EAISGELLVY-----------HVPEDTF----FDHEDGGTRKL--KLHLMTM-DRTTIPP 265
E E H+P FD + KLH ++ ++
Sbjct: 367 E--PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
Query: 266 T---HWLQFDAKNQEFYGIPQLTDLGRR---EYQLVCK-DSNGLMAN--DGLEVIVKSPG 316
T + + K + + L R Y + DS+ L+ D
Sbjct: 425 TISIPSIYLELKVK----LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ--------- 471
Query: 317 PAYYSASFSLTLARPSSTFAQPAAQRAFLEKLAGLFGDRN--ASKIVNIEFEDNPQEPGK 374
Y S + + + +F D KI + N
Sbjct: 472 ---YFYSH---IGHHLKN-IEHPERMTLFRM---VFLDFRFLEQKIRHDSTAWNASGSIL 521
Query: 375 STV--VRWANRTLASNVECPETTIGLLREVLLT---------EDDLLQESLVTSLEKDYG 423
+T+ +++ + N E + + + L DLL+ +L+ E +
Sbjct: 522 NTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581
Query: 424 VKHASV 429
H V
Sbjct: 582 EAHKQV 587
Score = 47.5 bits (112), Expect = 1e-05
Identities = 67/564 (11%), Positives = 157/564 (27%), Gaps = 204/564 (36%)
Query: 5 QIFVYNILLDLYGNSGNSSYI--TVRSVVTNKEPYVFTYTNESLPRNECPTAQINNLLEV 62
+F + + + + +S+++ +E + + ++ + L
Sbjct: 23 SVFEDAFVDNF-----DCKDVQDMPKSILSKEEI-------DHIIMSKDAVSGTLRLFWT 70
Query: 63 ISNTTTGQAKPVLTRALGRLMTVKNITW--RGIGHCEDSPPPPVVKVKLENQVPLIRNPI 120
+ + + + ++ + + ++ N + I E P + ++ +E + L +
Sbjct: 71 LLS----KQEEMVQKFVEEVLR-INYKFLMSPI-KTEQRQPSMMTRMYIEQRDRLYNDN- 123
Query: 121 DHLEAISGELLV-YHVP-EDTFFDHEDGGTRKLKLHLMTMD--RYVISNTTTGQAKPVLT 176
++ Y+V + KL+ L+ + + V+ + G K +
Sbjct: 124 --------QVFAKYNVSRLQPY--------LKLRQALLELRPAKNVLIDGVLGSGKTWVA 167
Query: 177 RALGRLMTVK-----NITWRGIGHCEDSPPPPVVKVKLENQVPLIR-------------- 217
+ V+ I W + +C +SP + LE L+
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNC-NSP-----ETVLEMLQKLLYQIDPNWTSRSDHSS 221
Query: 218 NPIDHLEAISGELLVYHVPEDTFFDHEDGGTRKLKLHLMTMD--RTTIPPTHWLQFDAKN 275
N + +I EL + + L+ + + W F+
Sbjct: 222 NIKLRIHSIQAEL-------RRLLKS-----KPYENCLLVLLNVQN---AKAWNAFNLS- 265
Query: 276 QEFYGIPQLTDLGRREYQLVCK------DSNGLMANDGLEVIVKSPGPAYYSASFSLTLA 329
CK + A + ++L
Sbjct: 266 --------------------CKILLTTRFKQ----------VTDFLSAATTT---HISLD 292
Query: 330 RPSSTFAQPAAQRAFLEKLAGLFGDRNASKIVNIEFEDNPQE-----P------GKST-- 376
S T +++ L K ++ +D P+E P +S
Sbjct: 293 HHSMTLTP--------DEVKSLL-----LKYLDCRPQDLPREVLTTNPRRLSIIAESIRD 339
Query: 377 -VVRWAN----------RTLASNVEC----------------------PETTIGLL---- 399
+ W N + S++ P + L+
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 400 --REVLLTEDDLLQESLVTSLEKDYGVKHASVIPTGICEGLKTP------LHTPGVER-- 449
+V++ + L + SL +EK + IP+ E LK LH V+
Sbjct: 400 IKSDVMVVVNKLHKYSL---VEKQP-KESTISIPSIYLE-LKVKLENEYALHRSIVDHYN 454
Query: 450 -KPAYSGKNTPANASVEYLITFVA 472
+ + +Y + +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIG 478
Score = 34.8 bits (79), Expect = 0.10
Identities = 37/277 (13%), Positives = 75/277 (27%), Gaps = 84/277 (30%)
Query: 362 NIEFEDNPQEPGKSTVVRWANRTLASNVECPETTIGLLREVLLTE--DDLL--------- 410
+++FE + ++ N +C + + + +L E D ++
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSILSKEEIDHIIMSKDAVSGT 64
Query: 411 ----------QESLV-----TSLEKDYGVKHASVIPTGICEGLKTPLHTPGVERKPAYSG 455
QE +V L +Y + +KT P + +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKF---------LMSPIKTEQRQPSMMTRMYIEQ 115
Query: 456 KNTPANASVEYLITFV------------------APLVVIVIMLLCA----ALIACLLYR 493
++ N + + V A V+I +L AL CL Y+
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175
Query: 494 --RRHTGK---MSVGN-GVDSGILIRSKGIPVIFQDELEERLEVSSGTKSPIILKEEKPP 547
+ K +++ N +L + + R + SS
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS-----------NIK 224
Query: 548 LPPPEYNRDKNDFSRDKNDYSRSQPNATTALLSDIDD 584
L + + K Y LL + +
Sbjct: 225 LRIHSIQAELRRLLKSK-PYENC-------LL-VLLN 252
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 50.0 bits (119), Expect = 2e-06
Identities = 81/496 (16%), Positives = 129/496 (26%), Gaps = 191/496 (38%)
Query: 214 PLIRNPIDHLEAISGEL-LVYHVPE----------DTFFDHEDGGTRKLKLHLMTMDRTT 262
PL + H G L V VP + F T D T
Sbjct: 8 PLT---LSH-----GSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAAD----DEPT 55
Query: 263 IPP---THWLQFDAKNQEFYGIPQLTDLGR-------REYQLVCKDSNGLMA-----NDG 307
P +L + + E + Q + Y L D + L A ND
Sbjct: 56 TPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCY-LEGNDIHALAAKLLQENDT 114
Query: 308 LEVIVKSPGPAYYSASFSLTLARPSSTFAQPAAQRAFLE---KLAGLFGDRNASKIVNIE 364
V K Y +A RP + A RA E +L +FG
Sbjct: 115 TLVKTKELIKNYITARI--MAKRPFDKKSNSALFRAVGEGNAQLVAIFG----------- 161
Query: 365 FEDNPQEPGKSTVVRWAN--RTLASNVECPETTIGLLREVLLTEDDLLQESLVTSLEKDY 422
G+ + R L +T L+ +++ + L E + T+L+ +
Sbjct: 162 --------GQGNTDDYFEELRDLY------QTYHVLVGDLIKFSAETLSELIRTTLDAE- 206
Query: 423 GVKHASVIPTGICEGLKTPLHTPGVERKPAYSGKNTPANASVEYLITFVAP--LVVIVIM 480
V G+ + L P P +YL++ P +I ++
Sbjct: 207 -----KVFTQGL--NILEWLENP--SNTP-----------DKDYLLS--IPISCPLIGVI 244
Query: 481 LLCAALIACLLYRRRHTGKMSVGNGVD--SGILIRSKGIP---VI--------FQDELEE 527
L ++ + G G S+G+ I F + +
Sbjct: 245 QLAHYVVTA------KLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRK 298
Query: 528 RLEVS--SGTKS----------PIILKE-----EKPPLP--------------------- 549
+ V G + P IL++ E P P
Sbjct: 299 AITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNS 358
Query: 550 --PPE-------YNRDKNDF--------------------SRDKNDYSR---SQ--PNAT 575
P N KN + D SR S+ +
Sbjct: 359 HLPAGKQVEISLVNGAKN-LVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFS 417
Query: 576 TALLSDIDDTSPYHPP 591
L + SP+H
Sbjct: 418 NRFL-PV--ASPFHSH 430
Score = 47.7 bits (113), Expect = 1e-05
Identities = 88/547 (16%), Positives = 156/547 (28%), Gaps = 211/547 (38%)
Query: 44 ESLPRNECPTAQINNLL--------EVISNTTTGQAKPVLTRALGRL----MTVKNITWR 91
E ++ PT L+ ++ + GQ VL L + +I
Sbjct: 46 EGFAADDEPTTPAE-LVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI--- 101
Query: 92 GIGHC-----EDSPPPPVVKVKLENQVPLIRN----------PIDH------LEAI-SGE 129
H +VK K LI+N P D A+ G
Sbjct: 102 ---HALAAKLLQENDTTLVKTKE-----LIKNYITARIMAKRPFDKKSNSALFRAVGEGN 153
Query: 130 LLVYHV-----PEDTFFDHEDGGTRKLKLHLMTMDRYVISNTTTGQAKPVLTRALGRLMT 184
+ + D +F+ E L+ D Y T ++ + L
Sbjct: 154 AQLVAIFGGQGNTDDYFE-E------LR------DLY---QTYHVLVGDLIKFSAETLSE 197
Query: 185 -VKN--------------ITWRGIGHCEDSPPP------PVVKVKLENQVPLI------- 216
++ + W + + ++P P+ PLI
Sbjct: 198 LIRTTLDAEKVFTQGLNILEW--LENPSNTPDKDYLLSIPI-------SCPLIGVIQLAH 248
Query: 217 ---------RNP---IDHLEAISG---ELLVYHVP-----EDTFFDHEDG--------GT 248
P +L+ +G L+ ++FF G
Sbjct: 249 YVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGV 308
Query: 249 RKLKLHLMTMDRTTIPPTHWLQFDAKNQEFYGIP--QL--TDLGRREYQLVCKDSNG-LM 303
R + T++PP+ L+ +N E G+P L ++L + + Q +N L
Sbjct: 309 RCYE----AYPNTSLPPSI-LEDSLENNE--GVPSPMLSISNLTQEQVQDYVNKTNSHLP 361
Query: 304 ANDGLEV-IVKSP------GPAYYSASFSLTL--ARPSSTFAQ---PAAQRA------FL 345
A +E+ +V GP +LTL A+ S Q P ++R FL
Sbjct: 362 AGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFL 421
Query: 346 -----------EKLAGLFGDRNASKIVNIEFED------------NPQEPGKSTV----- 377
+ L V+ +D + + S
Sbjct: 422 PVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD 481
Query: 378 ------VRW--ANRTLASNVEC--PETTIGLLREVLLTEDDL----LQESLVTSLEK--- 420
V+W + A+++ P GL LT + ++ + +L+
Sbjct: 482 CIIRLPVKWETTTQFKATHILDFGPGGASGLGV---LTHRNKDGTGVRVIVAGTLDINPD 538
Query: 421 -DYGVKH 426
DYG K
Sbjct: 539 DDYGFKQ 545
Score = 45.8 bits (108), Expect = 4e-05
Identities = 59/309 (19%), Positives = 102/309 (33%), Gaps = 93/309 (30%)
Query: 156 MTMDRYVISNTTTGQAKPVLTRALGRLMTVKNITWRGIGHCEDSPPPPVV--------KV 207
M MD Y S A+ V RA + I ++P + ++
Sbjct: 1631 MGMDLYKTSKA----AQDVWNRADNHFKDTYGFSILDI--VINNPVNLTIHFGGEKGKRI 1684
Query: 208 KLENQVPLI-RNPIDHLEAISGELLVYHVPEDTF---FDHEDGGTRKLKL------HLMT 257
+ EN +I +D + E + + E + F E G L L
Sbjct: 1685 R-ENYSAMIFETIVD--GKLKTEKIFKEINEHSTSYTFRSEKG---LLSATQFTQPALTL 1738
Query: 258 MDRTTIPPTHWLQF-DAKNQEFYGIPQLTD------LGRREYQ-LVCKDSNGLMA-NDGL 308
M++ F D K++ G+ LG EY L +M+ +
Sbjct: 1739 MEK--------AAFEDLKSK---GLIPADATFAGHSLG--EYAALAS--LADVMSIESLV 1783
Query: 309 EVIVKSPGPAYYSA---------SFSLTLARPSS---TFAQPAAQRAFLEKLAGLFGDRN 356
E +V G A ++ + P +F+Q A + +E++ +
Sbjct: 1784 E-VVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQ-EALQYVVERVG-----KR 1836
Query: 357 ASK---IVNIEFEDNPQEPGKSTVVRWANRTLASNVECPETTIGLLREVLLTEDDL--LQ 411
IVN N + V A ++ +T +L + L + D+ LQ
Sbjct: 1837 TGWLVEIVN----YN--VENQQYVA-------AGDLRALDTVTNVLNFIKLQKIDIIELQ 1883
Query: 412 ESLVTSLEK 420
+SL SLE+
Sbjct: 1884 KSL--SLEE 1890
Score = 43.1 bits (101), Expect = 3e-04
Identities = 53/324 (16%), Positives = 86/324 (26%), Gaps = 122/324 (37%)
Query: 308 LEVIVKSPGPAYYSAS-----FSLTLARPSSTFAQPAAQRAFLEKLAGLFGDRNASKIVN 362
LE ++ P +++ AS F+ L P+ FA E L G F
Sbjct: 16 LEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE-LVGKF---------- 64
Query: 363 IEFEDNPQEPGKSTVVRWANRTLASNVECPETTIGLLREVLLTEDDLLQESLVTSLEKDY 422
+ + ++S VE + +G +VL L E E Y
Sbjct: 65 LGY-------------------VSSLVE--PSKVGQFDQVLNL---CLTE-----FENCY 95
Query: 423 GVKHASVIPTGICEGLK-TPLHTPGVERKPAYSGKNTPANASVEYLITFVAPLVVIV--I 479
L+ +H A L+
Sbjct: 96 ---------------LEGNDIH-------------------------ALAAKLLQENDTT 115
Query: 480 MLLCAALIACLLYRRRHTGKMSVGNGVDSGILIRS-----KGIPVIF--Q-------DEL 525
++ LI R K +S L R+ + IF Q +EL
Sbjct: 116 LVKTKELIKN-YITARIMAKRPFDKKSNS-ALFRAVGEGNAQLVAIFGGQGNTDDYFEEL 173
Query: 526 EERLEVSSGTKSPIILKEEKPPLPPPEYNRDKNDFSRDKNDYSRSQPNATTALLSDIDDT 585
+ + +I K L ++ R D + +L +++
Sbjct: 174 RDLYQTYHVLVGDLI-KFSAETL---------SELIRTTLDAEKVFTQGLN-ILEWLENP 222
Query: 586 SPYHPPPPIRPAPTYRLPPPYSPP 609
S P Y L P S P
Sbjct: 223 SN-------TPDKDYLLSIPISCP 239
Score = 41.2 bits (96), Expect = 0.001
Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 59/197 (29%)
Query: 17 GNSGNSSY-ITVRSVVTNK-EPYVFTYTNESLPRNECPTAQINNLLEVIS--NTTTGQAK 72
N G S +++ ++ + + YV TN LP + Q+ IS N G
Sbjct: 330 NNEGVPSPMLSISNLTQEQVQDYV-NKTNSHLPAGK----QVE-----ISLVN---GAKN 376
Query: 73 PVLT---RALGRLMTVKNITWRGIGHCEDSPPPPV--VKVKLENQVPLIRN---PI---- 120
V++ ++L L N+T R P + ++ + N P+
Sbjct: 377 LVVSGPPQSLYGL----NLTLRKA-----KAPSGLDQSRIPFSERKLKFSNRFLPVASPF 427
Query: 121 --DHLEAISGELLVYHVPEDTF-FDHEDGGTRKLKLHLMTMDRYVISNTTTGQ----AKP 173
L + +L+ + ++ F+ +D +++ + Y +T G
Sbjct: 428 HSHLLVP-ASDLINKDLVKNNVSFNAKD-----IQIPV-----Y---DTFDGSDLRVLSG 473
Query: 174 VLTRALGRLMTVKNITW 190
++ + + + W
Sbjct: 474 SISERIVDCIIRLPVKW 490
Score = 30.0 bits (67), Expect = 2.7
Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 8/61 (13%)
Query: 531 VSSGTKSPIILK----EEKPPLPPPEYNRDKNDFSRDKNDYSRSQPNATTALLSDIDDTS 586
+ + + P+ L E +P + S+ + +++ P T +D + T+
Sbjct: 1 MDAYSTRPLTLSHGSLEHVLLVPTASFFI----ASQLQEQFNKILPEPTEGFAADDEPTT 56
Query: 587 P 587
P
Sbjct: 57 P 57
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A
{Mus musculus} SCOP: b.1.6.2 d.272.1.1
Length = 246
Score = 46.8 bits (110), Expect = 8e-06
Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 225 AISGELLVYHVPEDTFFDHEDGGTRKLKLHLMTMDRTTIPPTHWLQFDAKNQEFYGIPQL 284
A+ G +P D + + + + +P WL +D + G+P
Sbjct: 13 AVVGRSFRVSIPTDLIASSGE------IIKVSAAGKEALP--SWLHWDPHSHILEGLPLD 64
Query: 285 TDLGRREYQLVCKD--SNGLMANDGLEVIVKSPGPAYYSASFSLTLARPSSTFAQPAA 340
TD G + +NG V P ++ S+ A P+A
Sbjct: 65 TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNEPQSVRAASSDPGEVVPSA 122
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.5 bits (65), Expect = 1.9
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 11/31 (35%)
Query: 438 LKTPLHTPGVERKPAYSGKNTPA---NASVE 465
L+ L K Y+ + PA A++E
Sbjct: 25 LQASL-------KL-YADDSAPALAIKATME 47
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis,
malonyl/palmitoyl transferase, phosphopantetheine,
transferase; HET: GVL FMN; 3.10A {Saccharomyces
cerevisiae} PDB: 2vkz_A* 3hmj_A*
Length = 1887
Score = 30.3 bits (68), Expect = 2.2
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 10/59 (16%)
Query: 351 LFGDRNASKIVNIEFEDNPQEPGKS-TVVRWANRTLASNVECPETTIGLLREVLLTEDD 408
D N ++V E G S T+ A RTL + E + + L RE+L D
Sbjct: 35 FLKDFNTERVV---------EIGPSPTLAGMAQRTLKNKYESYDAALSLHREILCYSKD 84
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl
reductase, ketoacyl synthase, ketoacyl reductase; 3.1A
{Thermomyces lanuginosus} PDB: 2uvb_A*
Length = 1878
Score = 30.3 bits (68), Expect = 2.3
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 10/59 (16%)
Query: 351 LFGDRNASKIVNIEFEDNPQEPGKS-TVVRWANRTLASNVECPETTIGLLREVLLTEDD 408
+ ++ +IV E G S T+ A RTL S E + + R++L D
Sbjct: 35 ILAEKRTERIV---------EIGPSDTLGGMARRTLQSKYEAYDAATSVQRQILCYCKD 84
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.136 0.407
Gapped
Lambda K H
0.267 0.0639 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 9,542,164
Number of extensions: 589074
Number of successful extensions: 1292
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1276
Number of HSP's successfully gapped: 23
Length of query: 609
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 510
Effective length of database: 3,937,614
Effective search space: 2008183140
Effective search space used: 2008183140
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.1 bits)