Your job contains 1 sequence.
>psy12983
MTRFYKELGCKLKSDGGKYPPSYECPTPLLVSVSNFCPFASFAEATEKTCLVKGKTYQIG
DKIQAEPGPKLPVPTLNVPSIWESLLDRIVAELTVYPPESFTLSNPSKLTHNDGQSHLEE
HKLTHNDATPLLVSVSIFCPFVLNQGLGKYFKEVSVSFTECPNLTSHPFNLTSAERRQTM
LFSATTTAKTETLTKLALKKEPVYIGVDDTKEEATVAGLEQGYVVCPSEKRFLLLFTFLK
KNHIGEIVAWHVLLLQVIKIKVQTRIGKEDFVTSVRNVLAAHYKDQPVGLGGVILIENAP
AKHHVMPDFSTTPLETKDQLNVRSNYIGLGGVILIENAPAKHHVMPDFSTTPLETKDQLN
EWLVFKDLTPPLISVGTVISADVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMT
EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTREL
SMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFL
YKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSATTTAKTETLTKLALKKEP
VYIGVDDTKEEATVAGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKFHHE
LLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPP
DDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQL
QLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDLGKDSKHTCVLMTRII
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12983
(838 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 1717 8.3e-177 1
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 1684 2.6e-173 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 1647 2.0e-171 2
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 1657 1.9e-170 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 1657 1.9e-170 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 1652 6.4e-170 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 1652 6.4e-170 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 1649 1.3e-169 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 1649 1.3e-169 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 1647 2.2e-169 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 1647 2.2e-169 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 1647 2.2e-169 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 1647 2.2e-169 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 1511 5.6e-155 1
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 1407 5.9e-144 1
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 1407 5.9e-144 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 1384 1.6e-141 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 1380 4.3e-141 1
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 1372 3.0e-140 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 1372 3.0e-140 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 1255 7.6e-128 1
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 1235 9.9e-126 1
GENEDB_PFALCIPARUM|PFF1500c - symbol:PFF1500c "DEAD/DEAH ... 1147 2.1e-116 1
UNIPROTKB|C6KTE4 - symbol:PFF1500c "DEAD/DEAH box ATP-dep... 1147 2.1e-116 1
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 846 1.7e-84 1
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 846 1.7e-84 1
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 836 1.9e-83 1
UNIPROTKB|H7C452 - symbol:DDX18 "ATP-dependent RNA helica... 578 8.3e-83 2
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 827 1.7e-82 1
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 827 1.7e-82 1
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 827 1.7e-82 1
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 825 2.8e-82 1
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 820 9.4e-82 1
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 778 7.4e-80 2
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 789 1.8e-78 1
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 780 1.6e-77 1
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 770 1.9e-76 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 758 3.5e-75 1
TAIR|locus:2160225 - symbol:AT5G54910 species:3702 "Arabi... 745 8.4e-74 1
WB|WBGene00021277 - symbol:Y23H5B.6 species:6239 "Caenorh... 735 9.6e-73 1
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 724 1.4e-71 1
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 724 1.4e-71 1
TAIR|locus:2825324 - symbol:AT1G71370 species:3702 "Arabi... 692 3.5e-68 1
ZFIN|ZDB-GENE-021212-1 - symbol:ddx55 "DEAD (Asp-Glu-Ala-... 670 7.4e-66 1
UNIPROTKB|Q5ZLN8 - symbol:DDX55 "ATP-dependent RNA helica... 662 5.2e-65 1
UNIPROTKB|F1P8J6 - symbol:DDX55 "Uncharacterized protein"... 662 5.2e-65 1
UNIPROTKB|F1NJA0 - symbol:DDX55 "ATP-dependent RNA helica... 658 1.4e-64 1
UNIPROTKB|E2R316 - symbol:DDX55 "Uncharacterized protein"... 657 1.8e-64 1
MGI|MGI:1915098 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) bo... 656 2.3e-64 1
TAIR|locus:2153564 - symbol:AT5G05450 species:3702 "Arabi... 655 2.9e-64 1
RGD|2324094 - symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box po... 651 7.6e-64 1
UNIPROTKB|F1MW45 - symbol:DDX55 "ATP-dependent RNA helica... 650 9.7e-64 1
UNIPROTKB|F6XWM4 - symbol:DDX55 "Uncharacterized protein"... 592 9.9e-64 2
UNIPROTKB|Q8NHQ9 - symbol:DDX55 "ATP-dependent RNA helica... 649 1.2e-63 1
UNIPROTKB|Q2NL08 - symbol:DDX55 "ATP-dependent RNA helica... 644 4.2e-63 1
UNIPROTKB|F1RFL5 - symbol:DDX55 "Uncharacterized protein"... 642 6.9e-63 1
DICTYBASE|DDB_G0271708 - symbol:ddx31 "DEAD/DEAH box heli... 418 2.4e-62 3
FB|FBgn0037561 - symbol:CG9630 species:7227 "Drosophila m... 609 2.2e-59 1
POMBASE|SPBC24C6.02 - symbol:SPBC24C6.02 "ATP-dependent R... 595 6.6e-58 1
UNIPROTKB|F1N5H8 - symbol:DDX31 "Uncharacterized protein"... 373 7.6e-58 4
FB|FBgn0030855 - symbol:CG5800 species:7227 "Drosophila m... 594 8.4e-58 1
RGD|1304895 - symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box po... 367 9.2e-58 4
UNIPROTKB|F1NM06 - symbol:DDX31 "Uncharacterized protein"... 369 2.6e-57 3
UNIPROTKB|F1S0U0 - symbol:DDX31 "Uncharacterized protein"... 358 7.9e-56 4
ZFIN|ZDB-GENE-030131-3973 - symbol:ddx31 "DEAD (Asp-Glu-A... 373 1.9e-55 2
UNIPROTKB|F8WAJ0 - symbol:DDX31 "Probable ATP-dependent R... 367 1.1e-54 3
TAIR|locus:2064844 - symbol:AT2G40700 species:3702 "Arabi... 370 1.9e-54 4
DICTYBASE|DDB_G0291588 - symbol:ddx55 "DEAD/DEAH box heli... 451 2.4e-54 2
UNIPROTKB|Q9H8H2 - symbol:DDX31 "Probable ATP-dependent R... 367 4.3e-54 3
CGD|CAL0000864 - symbol:DRS1 species:5476 "Candida albica... 548 6.3e-53 1
UNIPROTKB|Q5ACK7 - symbol:DRS1 "ATP-dependent RNA helicas... 548 6.3e-53 1
TAIR|locus:2159527 - symbol:STRS2 "STRESS RESPONSE SUPPRE... 544 1.7e-52 1
WB|WBGene00013983 - symbol:ZK512.2 species:6239 "Caenorha... 537 1.2e-51 1
TAIR|locus:2159517 - symbol:PDE340 "PIGMENT DEFECTIVE 340... 547 1.9e-51 2
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 514 3.1e-51 2
UNIPROTKB|Q9KNA4 - symbol:VC_A0061 "ATP-dependent RNA hel... 530 8.2e-51 1
TIGR_CMR|VC_A0061 - symbol:VC_A0061 "ATP-dependent RNA he... 530 8.2e-51 1
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 514 1.0e-50 2
ZFIN|ZDB-GENE-050522-359 - symbol:zgc:112350 "zgc:112350"... 528 1.4e-50 1
WB|WBGene00012059 - symbol:T26G10.1 species:6239 "Caenorh... 524 4.1e-50 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 521 9.0e-50 1
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 520 1.2e-49 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 520 1.2e-49 1
UNIPROTKB|F1NQV5 - symbol:DDX27 "Uncharacterized protein"... 532 1.7e-49 1
TIGR_CMR|SO_1383 - symbol:SO_1383 "ATP-dependent RNA heli... 518 2.0e-49 1
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 533 2.4e-49 1
ASPGD|ASPL0000013201 - symbol:AN4233 species:162425 "Emer... 517 2.6e-49 1
UNIPROTKB|F1Q073 - symbol:DDX27 "Uncharacterized protein"... 530 3.9e-49 1
UNIPROTKB|J9P9C6 - symbol:DDX27 "Uncharacterized protein"... 530 5.7e-49 1
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 514 5.7e-49 1
MGI|MGI:2385884 - symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) bo... 528 6.2e-49 1
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 527 7.2e-49 1
FB|FBgn0027602 - symbol:CG8611 species:7227 "Drosophila m... 380 7.9e-49 3
ZFIN|ZDB-GENE-031001-8 - symbol:ddx27 "DEAD (Asp-Glu-Ala-... 528 8.5e-49 1
UNIPROTKB|A1A4H6 - symbol:DDX27 "Probable ATP-dependent R... 526 1.2e-48 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 509 2.1e-48 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 509 2.1e-48 1
UNIPROTKB|E1C187 - symbol:DDX27 "Uncharacterized protein"... 523 2.7e-48 1
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 507 3.5e-48 1
UNIPROTKB|Q96GQ7 - symbol:DDX27 "Probable ATP-dependent R... 523 4.7e-48 1
WARNING: Descriptions of 797 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 1717 (609.5 bits), Expect = 8.3e-177, P = 8.3e-177
Identities = 322/443 (72%), Positives = 372/443 (83%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
F +LKG V E TL+AI +MGFT+MTEIQ++++ PLL+GRDLVG+A+TGSGKTLAFL+PAV
Sbjct: 187 FASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAV 246
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
ELI L+FMPRNGTG+IIISPTRELSMQTFGVLKELM +HHHTYGL+MGG++RQ E++KL
Sbjct: 247 ELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKL 306
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
KGINI+VATPGRLLDHLQN+P+FLYKNLQCLIIDE DRIL+IGFEE++KQI+NLLPKRR
Sbjct: 307 GKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRR 366
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
QTMLFS P+Y+GV D ++ ATV GLEQGY+VCPSE
Sbjct: 367 QTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFT 426
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
VMVFFSSCMSVK+HHEL NYIDLPV IHGKQKQ KRTTTFFQFCNAE+GI
Sbjct: 427 FLKKNRKKKVMVFFSSCMSVKYHHELFNYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGI 486
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
LLCTDVAARGLDIP VDWIVQYDPPDDP+EYIHRVGRTARG G+SGHALL++RPEELGFL
Sbjct: 487 LLCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFL 546
Query: 756 RYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQI 815
RYLK AK+PLNEFEFSW KI+DIQLQLEKLI+KNYFLN S KEAFK+YVRAYDSH LKQI
Sbjct: 547 RYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNYFLNQSAKEAFKSYVRAYDSHQLKQI 606
Query: 816 FDIDTMDLGKDSKHTCVLMTRII 838
F+++T+DL +K L+ ++
Sbjct: 607 FNVNTLDLQAVAKSFGFLVPPVV 629
Score = 143 (55.4 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 175 ERRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
+RRQTMLFS P+Y+GV D ++ ATV GLEQGY+VCPSE
Sbjct: 364 KRRQTMLFSATQTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCPSE 418
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 1684 (597.9 bits), Expect = 2.6e-173, P = 2.6e-173
Identities = 322/445 (72%), Positives = 363/445 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + F +L G V ENTLK I+DMGFT MTEIQ ++I PLLEGRD++ +AKTGS
Sbjct: 155 LGLTGAFEDNSFTSLAGLVSENTLKGISDMGFTHMTEIQHKSIKPLLEGRDILAAAKTGS 214
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELIY LKFMPRNGTG+II+SPTREL+MQT+GVLKELM +H HTYGLIMG
Sbjct: 215 GKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRELAMQTYGVLKELMNHHVHTYGLIMG 274
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKL GINIIVATPGRLLDH+QNTP F+YKNLQCL+IDEADRIL++GFEE+M
Sbjct: 275 GSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILEVGFEEEM 334
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLPKRRQTMLFS P+Y+GVDD KE ATV GLEQGYVVC
Sbjct: 335 KQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVC 394
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTT
Sbjct: 395 PSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQTKRTTT 454
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPK--EYIHRVGRTARGEGSSGH 742
FFQFCNAE+GILLCTDVAARGLDIP VDWIVQYDPPDDPK EYIHRVGRTARG GH
Sbjct: 455 FFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDPPDDPKQKEYIHRVGRTARGINGRGH 514
Query: 743 ALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKA 802
ALLILRPEELGFLRYLKQA++PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+KA
Sbjct: 515 ALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKA 574
Query: 803 YVRAYDSHHLKQIFDIDTMDLGKDS 827
Y+RAYDSH LKQI+++ +DL K S
Sbjct: 575 YIRAYDSHSLKQIYNVGNLDLNKVS 599
Score = 153 (58.9 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 31/55 (56%), Positives = 34/55 (61%)
Query: 175 ERRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
+RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVCPSE
Sbjct: 343 KRRQTMLFSATQTRKVEDLAKISLKKEPLYVGVDDNKETATVDGLEQGYVVCPSE 397
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 1647 (584.8 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 312/439 (71%), Positives = 359/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTL+AI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 194 LGLTGAFEDTSFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 253
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI L+FMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 254 GKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 313
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKLA GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 314 GSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 373
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 374 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 433
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 434 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 493
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 494 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 553
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 554 LILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 613
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 614 RAYDSHSLKQIFNVNNLNL 632
Score = 146 (56.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 383 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 436
Score = 41 (19.5 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 373 ISVGTVISADVSLSIPSILSSTQFEALKGKVCENTL 408
+S TV+S V S+ +++ EA G + + T+
Sbjct: 42 VSKETVVSGKVKKSLKQSVNAGLSEAQNGDISKETV 77
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 1657 (588.4 bits), Expect = 1.9e-170, P = 1.9e-170
Identities = 314/439 (71%), Positives = 360/439 (82%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F++L V ENTLKAI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 172 LGLTGAFEDTSFDSLTNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 231
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 232 GKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 291
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKLA GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 292 GSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 351
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 352 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 411
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 412 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 471
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 472 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 531
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 532 LILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 591
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 592 RAYDSHSLKQIFNVNNLNL 610
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 361 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 414
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 1657 (588.4 bits), Expect = 1.9e-170, P = 1.9e-170
Identities = 314/439 (71%), Positives = 360/439 (82%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F++L V ENTLKAI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 168 LGLTGAFEDTSFDSLTNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 227
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 228 GKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 287
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKLA GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 288 GSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 347
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 348 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 407
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 408 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 467
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 468 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 527
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 528 LILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 587
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 588 RAYDSHSLKQIFNVNNLNL 606
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 357 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 410
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 1652 (586.6 bits), Expect = 6.4e-170, P = 6.4e-170
Identities = 312/439 (71%), Positives = 358/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTLKAI +MGF +MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 158 LGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGS 217
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+P +ELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 218 GKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 277
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AE QKL GINIIVATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 278 GSNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 337
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVC
Sbjct: 338 KQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVC 397
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE VMVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTT
Sbjct: 398 PSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTT 457
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 458 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 517
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PLN+F+FSWSK+SDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 518 LILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYI 577
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 578 RAYDSHSLKQIFNVNNLNL 596
Score = 150 (57.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 31/54 (57%), Positives = 33/54 (61%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVCPSE
Sbjct: 347 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSE 400
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 1652 (586.6 bits), Expect = 6.4e-170, P = 6.4e-170
Identities = 314/439 (71%), Positives = 357/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTLKAI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 167 LGLTGAFEDTSFASLSSLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 226
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM YH HTYGLIMG
Sbjct: 227 GKTLAFLIPAVELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMMYHVHTYGLIMG 286
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKL GINIIVATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 287 GSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 346
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 347 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 406
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 407 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 466
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 467 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 526
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LIL PEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 527 LILHPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 586
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 587 RAYDSHSLKQIFNVNNLNL 605
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 356 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 409
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 1649 (585.5 bits), Expect = 1.3e-169, P = 1.3e-169
Identities = 311/439 (70%), Positives = 357/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTLKAI +MGF MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 172 LGVTGAFEDTSFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGS 231
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+P +ELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 232 GKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 291
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AE QKL GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 292 GSNRSAEVQKLLNGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 351
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVC
Sbjct: 352 KQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVC 411
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE VMVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTT
Sbjct: 412 PSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTT 471
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 472 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 531
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PLN+F+FSWSK+SDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 532 LILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYI 591
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 592 RAYDSHSLKQIFNVNNLNL 610
Score = 150 (57.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 31/54 (57%), Positives = 33/54 (61%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVCPSE
Sbjct: 361 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSE 414
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 1649 (585.5 bits), Expect = 1.3e-169, P = 1.3e-169
Identities = 311/439 (70%), Positives = 357/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTLKAI +MGF MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 160 LGVTGAFEDTSFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGS 219
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+P +ELI LKFMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 220 GKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 279
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AE QKL GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 280 GSNRSAEVQKLLNGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 339
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVC
Sbjct: 340 KQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVC 399
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE VMVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTT
Sbjct: 400 PSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTT 459
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 460 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 519
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PLN+F+FSWSK+SDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 520 LILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYI 579
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 580 RAYDSHSLKQIFNVNNLNL 598
Score = 150 (57.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 31/54 (57%), Positives = 33/54 (61%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD KE ATV GLEQGYVVCPSE
Sbjct: 349 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSE 402
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
Identities = 313/439 (71%), Positives = 358/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTLKAI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 168 LGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 227
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI L+FMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 228 GKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 287
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKL GINIIVATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 288 GSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 347
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 348 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 407
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTT
Sbjct: 408 PSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTT 467
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++G LLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 468 FFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 527
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EF+FSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 528 LILRPEELGFLRYLKQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 587
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 588 RAYDSHSLKQIFNVNNLNL 606
Score = 146 (56.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 357 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 410
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 653 MSVKFHHELLNYIDLPVMCIHGKQKQ 678
+++ F ++ ++DL V GKQK+
Sbjct: 609 VALSFGFKVPPFVDLNVNSNEGKQKK 634
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
Identities = 312/439 (71%), Positives = 359/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTL+AI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 169 LGLTGAFEDTSFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 228
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI L+FMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 229 GKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 288
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKLA GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 289 GSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 348
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 349 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 408
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 409 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 468
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 469 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 528
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 529 LILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 588
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 589 RAYDSHSLKQIFNVNNLNL 607
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 358 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 411
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
Identities = 312/439 (71%), Positives = 359/439 (81%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
L + T F +L V ENTL+AI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGS
Sbjct: 165 LGLTGAFEDTSFASLTDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGS 224
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMG 504
GKTLAFL+PAVELI L+FMPRNGTG++I+SPTREL+MQTFGVLKELM +H HTYGLIMG
Sbjct: 225 GKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMG 284
Query: 505 GASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDM 564
G++R AEAQKLA GINI+VATPGRLLDH+QNTP F+YKNLQCL+IDEADRILD+GFEE++
Sbjct: 285 GSNRSAEAQKLANGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEEL 344
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
KQI+ LLP RRQTMLFS P+Y+GVDD K ATV GLEQGYVVC
Sbjct: 345 KQIIKLLPTRRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVC 404
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
PSE +MVFFSSC SVK+H+ELLNYIDLPV+ IHG+QKQ KRTTT
Sbjct: 405 PSEKRFLLLFTFLKKNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTT 464
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
FFQFCNA++GILLCTDVAARGLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHAL
Sbjct: 465 FFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHAL 524
Query: 745 LILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYV 804
LILRPEELGFLRYLKQ+K+PL+EFEFSWSKISDIQ QLEKLI KNYFL+ S +EA+K+Y+
Sbjct: 525 LILRPEELGFLRYLKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYI 584
Query: 805 RAYDSHHLKQIFDIDTMDL 823
RAYDSH LKQIF+++ ++L
Sbjct: 585 RAYDSHSLKQIFNVNNLNL 603
Score = 146 (56.5 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/54 (55%), Positives = 32/54 (59%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RRQTMLFS P+Y+GVDD K ATV GLEQGYVVCPSE
Sbjct: 354 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSE 407
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 1647 (584.8 bits), Expect = 2.2e-169, P = 2.2e-169
Identities = 308/430 (71%), Positives = 360/430 (83%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
F +L V ENTLK + +MGF MTEIQ +TI PLLEGRD++ +AKTGSGKTLAFL+P++
Sbjct: 161 FASLSEVVSENTLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSI 220
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
ELIY LKFMPRNGTG+I++SPTREL+MQT+GVLKELM +H HTYGLIMGG++R AEAQKL
Sbjct: 221 ELIYKLKFMPRNGTGVIVLSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKL 280
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
A G+NI+VATPGRLLDHLQNTP F++KNLQCLIIDEADRIL++GFEE++KQI+ LLPK+R
Sbjct: 281 ANGVNILVATPGRLLDHLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKR 340
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
Q+MLFS P+Y+GVDD K+ ATV GLEQGYVVCPSE
Sbjct: 341 QSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSEKRFLLLFT 400
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
+MVFFSSCMSVKFH+ELLNYIDLPVM IHGKQKQ KRTTTFFQFCNA++GI
Sbjct: 401 FLKKNRKKKLMVFFSSCMSVKFHYELLNYIDLPVMAIHGKQKQTKRTTTFFQFCNADSGI 460
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
LLCTDVAARGLDIP VDWIVQ+DPPDDPKEYIHRVGRTARG GHALLILRPEELGFL
Sbjct: 461 LLCTDVAARGLDIPEVDWIVQFDPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFL 520
Query: 756 RYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQI 815
R+LKQAK+PL+EFEFSW+KISDIQ QL+KLI KNY+L+ S +EA+K+YVRAYDSH LKQI
Sbjct: 521 RFLKQAKVPLSEFEFSWTKISDIQSQLDKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQI 580
Query: 816 FDIDTMDLGK 825
++++T+DL K
Sbjct: 581 YNVETLDLPK 590
Score = 144 (55.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/55 (50%), Positives = 34/55 (61%)
Query: 175 ERRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
++RQ+MLFS P+Y+GVDD K+ ATV GLEQGYVVCPSE
Sbjct: 338 KKRQSMLFSATQTRKVEDLARISLKKEPLYVGVDDNKDTATVEGLEQGYVVCPSE 392
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 290/442 (65%), Positives = 344/442 (77%)
Query: 387 IPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGK 446
+ L+ T F +L+GKV N LKA+ +GFT MTEIQA++I PLLEG+D++ SAKTGSGK
Sbjct: 59 VSEFLTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGK 118
Query: 447 TLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGA 506
TLAFL+PA+EL++ L + NGTG+II+SPTRELSMQT+GVL EL++ + TYGL+MGG+
Sbjct: 119 TLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGS 178
Query: 507 SRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQ 566
+R AE KLAKG++I+VATPGRLLDHLQNT FL +N++CLIIDEADRILDIGFE +M+Q
Sbjct: 179 NRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQ 238
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS 626
++ LPK+RQ+MLFS PV + V + EEATV GL+QGY+V PS
Sbjct: 239 VLRHLPKQRQSMLFSATHSPKVDELVKLALHSNPVRVSVHEKAEEATVEGLQQGYIVAPS 298
Query: 627 EXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFF 686
+ VMVFFSSC SVKFHHELLNYID+P M IHGKQKQ KRTTTFF
Sbjct: 299 DKRLLLLFTFLKKNKTKKVMVFFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFF 358
Query: 687 QFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI 746
QFC AETGILLCTDVAARGLDIPAVDWIVQYDP D+P+EYIHRVGRTARG SG ALL+
Sbjct: 359 QFCQAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIHRVGRTARGTNGSGKALLV 418
Query: 747 LRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRA 806
LRPEELGFLRYLK AK+ LNEFEFSWSK+++IQ QLE LISKNY+LN S KEA+K Y+RA
Sbjct: 419 LRPEELGFLRYLKAAKVTLNEFEFSWSKVANIQSQLENLISKNYYLNKSAKEAYKCYLRA 478
Query: 807 YDSHHLKQIFDIDTMDLGKDSK 828
YDSH LK IFD+ MDL SK
Sbjct: 479 YDSHSLKDIFDVTNMDLTAVSK 500
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 267/450 (59%), Positives = 343/450 (76%)
Query: 374 SVGTVISADVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEG 433
+ G V ++ +S SI +F L + ENT K+I +MGF KMT IQA++I PLLEG
Sbjct: 103 NTGNVSEKELGISKESI----EFSNLP--IEENTKKSIEEMGFKKMTPIQAKSILPLLEG 156
Query: 434 RDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMK 493
+DL+G+A+TGSGKTLAFL+PA+E++ F PRNGTG+IIISPTREL++Q +GV +ELMK
Sbjct: 157 KDLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMK 216
Query: 494 YHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEAD 553
YH T+G+++GGAS++ E ++L KG+N++VATPGRLLDHLQNT F+ KNL+CLIIDEAD
Sbjct: 217 YHTQTHGIVIGGASKKPEEERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEAD 276
Query: 554 RILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEAT 613
RIL++GFEE+M QI+ +PK RQTMLFS PVY+GVDD +E +T
Sbjct: 277 RILEVGFEEEMHQIIKKVPKTRQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREIST 336
Query: 614 VAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIH 673
V GLEQGYVVCPSE ++VF SSC +VK+ ELLNYID+PV+ +H
Sbjct: 337 VEGLEQGYVVCPSERRFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELLNYIDIPVLELH 396
Query: 674 GKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRT 733
G+QKQ KRT TF++F NAE GIL+CTDVAARGLDIP+VDWI+QYDPPDDPKEYIHRVGRT
Sbjct: 397 GRQKQQKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRT 456
Query: 734 ARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLN 793
ARG G G ALL L P+ELGFL+YLK AK+PLNE+EF SKI+++Q QLEK++S+N++L
Sbjct: 457 ARGVGKKGRALLFLLPKELGFLKYLKLAKVPLNEYEFPKSKIANVQDQLEKVVSQNFYLY 516
Query: 794 MSGKEAFKAYVRAYDSHHLKQIFDIDTMDL 823
S ++A+KAY+ AY SH LK IFD++ +DL
Sbjct: 517 NSARDAYKAYICAYASHSLKDIFDVNALDL 546
Score = 143 (55.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 29/53 (54%), Positives = 32/53 (60%)
Query: 177 RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
RQTMLFS PVY+GVDD +E +TV GLEQGYVVCPSE
Sbjct: 298 RQTMLFSATQTRKVDDIAKVSLNNSPVYVGVDDEREISTVEGLEQGYVVCPSE 350
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 267/451 (59%), Positives = 342/451 (75%)
Query: 379 ISADVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVG 438
+ V+L+ S +F L+ + EN KAI +MGF MTEIQ R+IPPLL GRD++G
Sbjct: 74 VQKSVNLNASSTSDIEKFSDLQ--LSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLG 131
Query: 439 SAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHT 498
+AKTGSGKTLAFL+P +E++Y LKF PRNGTG+IIISPTREL++Q FGV KEL+KYHH T
Sbjct: 132 AAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQT 191
Query: 499 YGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDI 558
+G+++GGA+R+AEA KL KG+N++VATPGRLLDHLQNT F+++NL+ L+IDEADRIL+I
Sbjct: 192 FGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEI 251
Query: 559 GFEEDMKQIVNLLP-KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGL 617
GFE++M+QI+ +LP + RQT+LFS P+Y+ VD K +TV GL
Sbjct: 252 GFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDSGKPTSTVEGL 311
Query: 618 EQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQK 677
EQGYVV S+ V+VF SSC SVK+ ELLNYIDLPV+ +HGKQK
Sbjct: 312 EQGYVVVDSDKRFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELLNYIDLPVLDLHGKQK 371
Query: 678 QMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGE 737
Q +RT TFF+FCNAE GILLCT+VAARGLDIPAVDWIVQYDPPDDP++YIHRVGRTARG
Sbjct: 372 QQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGT 431
Query: 738 GSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGK 797
+G +L+ L P ELGFLRYLK AK+ LNEFEF +K++++Q QLEKL+SKNY+L S K
Sbjct: 432 KGTGKSLMFLAPSELGFLRYLKTAKVSLNEFEFPANKVANVQSQLEKLVSKNYYLQQSAK 491
Query: 798 EAFKAYVRAYDSHHLKQIFDIDTMDLGKDSK 828
+ +++Y++AY S+ LK IFDI+ +DL K +K
Sbjct: 492 DGYRSYLQAYASYSLKSIFDINKLDLAKVAK 522
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 257/435 (59%), Positives = 336/435 (77%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+FE LK + + TLKAI MGFT MT +QARTIPPLL GRD++G+AKTGSGKTLAFL+PA
Sbjct: 43 KFEELK--LSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 100
Query: 455 VELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQK 514
+EL+++LKF PRNGTGII+I+PTREL++Q FGV +ELM++H T+G+++GGA+R+ EA+K
Sbjct: 101 IELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEK 160
Query: 515 LAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR 574
L KG+N+++ATPGRLLDHLQNT F++KNL+ LIIDEADRIL+IGFE++M+QI+ +LP
Sbjct: 161 LMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNE 220
Query: 575 -RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
RQ+MLFS P++I V + +T GLEQGYVVC S+
Sbjct: 221 DRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDKRFLLL 280
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
++VF SSC SVK++ ELLNYIDLPV+ +HGKQKQ KRT TFF+FCNAE
Sbjct: 281 FSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAER 340
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
GIL+CTDVAARGLDIPAVDWI+Q+DPPDDP++YIHRVGRTARG G +L+ L P ELG
Sbjct: 341 GILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPNELG 400
Query: 754 FLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLK 813
FLRYLK +K+PLNE+EF +KI+++Q QLEKLI NY+L+ + K+ +++Y++AY SH LK
Sbjct: 401 FLRYLKASKVPLNEYEFPENKIANVQSQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLK 460
Query: 814 QIFDIDTMDLGKDSK 828
++ ID +DL K +K
Sbjct: 461 TVYQIDKLDLAKVAK 475
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 1380 (490.8 bits), Expect = 4.3e-141, P = 4.3e-141
Identities = 249/425 (58%), Positives = 330/425 (77%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
E TL+ I +MGF MTEIQ RTIPPLL GRD++G+AKTGSGKTLAFL+PA+E++ L+F
Sbjct: 137 EKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFK 196
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
PRNGTG+I++SPTREL++Q FGV +EL+ H TYG+++GGA+R+AEA+KL KG+N+++A
Sbjct: 197 PRNGTGVIVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTKGVNLLIA 256
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR-RQTMLFSXX 583
TPGRLLDHLQNTP F++KNL+ L+IDEADRIL++GFE++M+QI+ +LP RQTMLFS
Sbjct: 257 TPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIIKILPNEDRQTMLFSAT 316
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P+YI VD KE +TV GLEQGYV+C ++
Sbjct: 317 QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKK 376
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++VFFSSC VK+H ELLNYIDLPV+ +HGKQKQ KRT TFF+FCNA+ G+L+CTDVAA
Sbjct: 377 KIIVFFSSCNCVKYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAA 436
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKI 763
RGLDIPAVDWI+Q+DPPDD ++YIHRVGRTARG G +L+ L+P E+GFL+YLK+A++
Sbjct: 437 RGLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQPSEVGFLKYLKEARV 496
Query: 764 PLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDL 823
P+ EF+F KI ++Q QLEKLIS+NY+LN S K+ +++Y++AY SH L+ +FD+ +DL
Sbjct: 497 PVVEFDFPAKKIVNVQSQLEKLISQNYYLNKSAKDGYRSYLQAYASHSLRSVFDVHKLDL 556
Query: 824 GKDSK 828
K +K
Sbjct: 557 VKVAK 561
Score = 121 (47.7 bits), Expect = 0.00090, P = 0.00090
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 175 ERRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 229
E RQTMLFS P+YI VD KE +TV GLEQGYV+C ++
Sbjct: 306 EDRQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYVICEAD 360
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 259/424 (61%), Positives = 328/424 (77%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
E T+KAI +MGFTKMT++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+Y+LK
Sbjct: 117 EPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIK 176
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
PRNGT +III+PTREL++Q FGV +ELM++H T G+++GGA R+ EA KLAKG+N++VA
Sbjct: 177 PRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLLVA 236
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP-KRRQTMLFSXX 583
TPGRLLDHL+NT +F++ NL+ L+IDEADRIL+IGFE++MKQI+ +LP + RQ+MLFS
Sbjct: 237 TPGRLLDHLKNT-QFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSAT 295
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P+YI V K+ +T GLEQGYVVC S+
Sbjct: 296 QTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKK 355
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++VF SSC SVKF+ ELLNYIDLPV+ +HGKQKQ KRT TFF+FCNA+ GIL+CTDVAA
Sbjct: 356 KIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAA 415
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKI 763
RGLDIPAVDWIVQ+DPPDDP++YIHRVGRTARG G +L+ L P ELGFLRYLK AK+
Sbjct: 416 RGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAAKV 475
Query: 764 PLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDL 823
PLNE+EF +KI++IQ QL KLI NY LN S K+ ++AY++AY SH LK ++ ID +DL
Sbjct: 476 PLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVYQIDKLDL 535
Query: 824 GKDS 827
K S
Sbjct: 536 KKVS 539
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 259/424 (61%), Positives = 328/424 (77%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
E T+KAI +MGFTKMT++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+Y+LK
Sbjct: 117 EPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIK 176
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
PRNGT +III+PTREL++Q FGV +ELM++H T G+++GGA R+ EA KLAKG+N++VA
Sbjct: 177 PRNGTAVIIITPTRELALQIFGVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLLVA 236
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP-KRRQTMLFSXX 583
TPGRLLDHL+NT +F++ NL+ L+IDEADRIL+IGFE++MKQI+ +LP + RQ+MLFS
Sbjct: 237 TPGRLLDHLKNT-QFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLPNENRQSMLFSAT 295
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P+YI V K+ +T GLEQGYVVC S+
Sbjct: 296 QTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYVVCDSDKRFLLLFSFLKRNVKK 355
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++VF SSC SVKF+ ELLNYIDLPV+ +HGKQKQ KRT TFF+FCNA+ GIL+CTDVAA
Sbjct: 356 KIIVFLSSCNSVKFYSELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAA 415
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKI 763
RGLDIPAVDWIVQ+DPPDDP++YIHRVGRTARG G +L+ L P ELGFLRYLK AK+
Sbjct: 416 RGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSELGFLRYLKAAKV 475
Query: 764 PLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDL 823
PLNE+EF +KI++IQ QL KLI NY LN S K+ ++AY++AY SH LK ++ ID +DL
Sbjct: 476 PLNEYEFPANKIANIQSQLTKLIKTNYLLNQSAKDGYRAYLQAYASHGLKTVYQIDKLDL 535
Query: 824 GKDS 827
K S
Sbjct: 536 KKVS 539
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 242/436 (55%), Positives = 314/436 (72%)
Query: 389 SILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL 448
SI+++ FE+L + +NT K+I +MGF +MT+IQA+ IPPL+ G D++G+A+TGSGKTL
Sbjct: 149 SIMTNKTFESLS--LSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTL 206
Query: 449 AFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASR 508
AFL+PAVEL+Y +KF PRNGTG+++I PTREL++Q++GV KEL+KYH T G ++GG R
Sbjct: 207 AFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKR 266
Query: 509 QAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIV 568
+ EA+ LAKG+N++VATPGRLLDHL+NT F++KNL+ L++DEADRIL+ FEED+K+I+
Sbjct: 267 KTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKIL 326
Query: 569 NLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEX 628
NLLPK RQT LFS PVYI VD+ ++E T GLEQGY V PS
Sbjct: 327 NLLPKTRQTSLFSATQSAKVEDLARVSLTS-PVYIDVDEGRKEVTNEGLEQGYCVVPSAM 385
Query: 629 XXXXXXXXXXXXXXXX-VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQ 687
+MVFFS+C S KFH EL YI + I G Q KRT TF Q
Sbjct: 386 RLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQ 445
Query: 688 FCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
F AETGILLCT+VAARGLD P VDWIVQYDPPD+P +YIHRVGRTARGEG+ G ALL+L
Sbjct: 446 FIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVL 505
Query: 748 RPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAY 807
P+EL F++YLK AKIP+ E EF K+ D++ +E LIS+NY L S KEA+K Y+ Y
Sbjct: 506 TPQELKFIQYLKAAKIPVEEHEFEEKKLLDVKPFVENLISENYALKESAKEAYKTYISGY 565
Query: 808 DSHHLKQIFDIDTMDL 823
DSH +K +F++ ++L
Sbjct: 566 DSHSMKDVFNVHQLNL 581
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 235/434 (54%), Positives = 315/434 (72%)
Query: 390 ILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 449
I+++ F++L + E T AI +MGF MT+IQA +I PLLEG+D++G+A+TGSGKTLA
Sbjct: 85 IMTNVTFDSLD--LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLA 142
Query: 450 FLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQ 509
FL+PAVEL++ +F PRNGTG+I+I PTREL++QT V +EL+K+H T +++GG +R+
Sbjct: 143 FLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRR 202
Query: 510 AEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVN 569
+EAQ++A G N+++ATPGRLLDHLQNT F+YK+L+CL+IDEADRIL+ FEEDM +I+
Sbjct: 203 SEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILK 262
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXX 629
+LPK RQT LFS PV++ VDD + + T GLEQGY V PS+
Sbjct: 263 ILPKTRQTALFSATQTSKVKDLARVSLTS-PVHVDVDDGRRKVTNEGLEQGYCVVPSKQR 321
Query: 630 XXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
+MVFFS+C SV+FH E++ D+ V IHG Q +RT TFF F
Sbjct: 322 LILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFM 381
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
A+ GILLCTDVAARGLDIP+VDWI+QYDPPD P EYIHRVGRTARGEG+ G ALL+L P
Sbjct: 382 KAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIP 441
Query: 750 EELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDS 809
EEL F+RYLK AK+P+ E EF+ ++S++Q LEK ++K+Y LN K+A++AY+ AY+S
Sbjct: 442 EELQFIRYLKAAKVPVKELEFNEKRLSNVQSALEKCVAKDYNLNKLAKDAYRAYLSAYNS 501
Query: 810 HHLKQIFDIDTMDL 823
H LK IF++ +DL
Sbjct: 502 HSLKDIFNVHRLDL 515
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 219/438 (50%), Positives = 304/438 (69%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S +FE L +C+ K + ++ F +TEIQA+ IP L G+D++G+AKTGSGKTLAFL
Sbjct: 146 SELKFEELN--ICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFL 203
Query: 452 VPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
VP++ ++YN+KF+P+NGTG++IISPTREL +Q + V K+L KY T G+I+GG SR E
Sbjct: 204 VPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEE 263
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+K GINI++ATPGRLLDH+QNT EF+YKNL CLIIDEADR+L IGFEE++ I+ L
Sbjct: 264 KKKFIHGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRL 323
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
PK+RQT LFS P++I V T + ATV L+QGY + +
Sbjct: 324 PKKRQTALFSATQTTKVESLIRLSLQK-PIFIEV--TTKIATVERLQQGYALVDEDKRFL 380
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
+MVFF++CMSV+F+++LLNYID+P CIHGK+KQ KR +F F A
Sbjct: 381 LLFTFLKKNMSKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAA 440
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
+ ILLCT+VAARGLDIP V++I+QYDPPDD KEYIHRVGRT RG+ S+G A++ L E
Sbjct: 441 KCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGQDSNGSAIIFLMKHE 500
Query: 752 LGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHH 811
L FL YLK IP+N+F + +K+ +IQ ++ +++KN+ L+ +EAFK+Y+ Y ++
Sbjct: 501 LKFLNYLKFYNIPINQFAYDPNKLINIQSHIQSIVTKNFHLHKMAREAFKSYLNGYITYA 560
Query: 812 LKQIFDIDTMDLGKDSKH 829
LK +FD++ ++L SK+
Sbjct: 561 LKDVFDVNNLNLLLTSKN 578
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 219/438 (50%), Positives = 304/438 (69%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S +FE L +C+ K + ++ F +TEIQA+ IP L G+D++G+AKTGSGKTLAFL
Sbjct: 146 SELKFEELN--ICDALKKGLKELNFVTLTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFL 203
Query: 452 VPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
VP++ ++YN+KF+P+NGTG++IISPTREL +Q + V K+L KY T G+I+GG SR E
Sbjct: 204 VPSINILYNIKFLPKNGTGVLIISPTRELCLQIYQVCKDLCKYIPQTNGIIIGGMSRNEE 263
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+K GINI++ATPGRLLDH+QNT EF+YKNL CLIIDEADR+L IGFEE++ I+ L
Sbjct: 264 KKKFIHGINILIATPGRLLDHMQNTKEFIYKNLICLIIDEADRLLQIGFEEEINLIIKRL 323
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
PK+RQT LFS P++I V T + ATV L+QGY + +
Sbjct: 324 PKKRQTALFSATQTTKVESLIRLSLQK-PIFIEV--TTKIATVERLQQGYALVDEDKRFL 380
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
+MVFF++CMSV+F+++LLNYID+P CIHGK+KQ KR +F F A
Sbjct: 381 LLFTFLKKNMSKKIMVFFNNCMSVQFYNDLLNYIDIPTYCIHGKKKQNKRLKSFHDFSAA 440
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
+ ILLCT+VAARGLDIP V++I+QYDPPDD KEYIHRVGRT RG+ S+G A++ L E
Sbjct: 441 KCAILLCTNVAARGLDIPNVNYIIQYDPPDDSKEYIHRVGRTCRGQDSNGSAIIFLMKHE 500
Query: 752 LGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHH 811
L FL YLK IP+N+F + +K+ +IQ ++ +++KN+ L+ +EAFK+Y+ Y ++
Sbjct: 501 LKFLNYLKFYNIPINQFAYDPNKLINIQSHIQSIVTKNFHLHKMAREAFKSYLNGYITYA 560
Query: 812 LKQIFDIDTMDLGKDSKH 829
LK +FD++ ++L SK+
Sbjct: 561 LKDVFDVNNLNLLLTSKN 578
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 173/424 (40%), Positives = 263/424 (62%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAF+VPA+EL+Y L++
Sbjct: 82 KKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWT 141
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + E++++ IN+++
Sbjct: 142 SADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESERIHH-INMLIC 200
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F +LQ LI+DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 201 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 260
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A L+Q Y+VC +
Sbjct: 261 TKSVKDLARLSLKD-PEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFLRSHLKKK 319
Query: 645 VMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFF+SC V++ + + LPV+ +HGKQ+QMKR + F + +L TD+A
Sbjct: 320 SIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIA 379
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHRVGRTAR + G ALL+L P EE G + L Q
Sbjct: 380 ARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYK-EGGEALLVLLPSEEKGMVEQLAQR 438
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+NE + + KI+DIQ +++ ++++ L + F +Y+R+ K++FD+ +
Sbjct: 439 KVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQRCFVSYLRSVYLMKNKEVFDVFKL 498
Query: 822 DLGK 825
L +
Sbjct: 499 PLAE 502
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 173/424 (40%), Positives = 263/424 (62%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAF+VPA+EL+Y L++
Sbjct: 82 KKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWT 141
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + E++++ IN+++
Sbjct: 142 SADGLGVLIISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLKEESERIHH-INMLIC 200
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F +LQ LI+DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 201 TPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 260
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A L+Q Y+VC +
Sbjct: 261 TKSVKDLARLSLKD-PEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFLRSHLKKK 319
Query: 645 VMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFF+SC V++ + + LPV+ +HGKQ+QMKR + F + +L TD+A
Sbjct: 320 SIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIA 379
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHRVGRTAR + G ALL+L P EE G + L Q
Sbjct: 380 ARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYK-EGGEALLVLLPSEEKGMVEQLAQR 438
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+NE + + KI+DIQ +++ ++++ L + F +Y+R+ K++FD+ +
Sbjct: 439 KVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQRCFVSYLRSVYLMKNKEVFDVFKL 498
Query: 822 DLGK 825
L +
Sbjct: 499 PLAE 502
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 173/420 (41%), Positives = 259/420 (61%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 STDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F NLQ L++DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P YI V + + +T A LEQ Y+VC +
Sbjct: 257 TKSVKDLARLSLKN-PEYIWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F + +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRSAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P EE G ++ L Q
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEEKGMVQQLLQK 434
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+ E + + K+ D+Q +LE ++++ L + F +Y+R+ K+IFD+ T+
Sbjct: 435 KVPVKEIKINPEKLIDVQKKLESFLAQDKDLKERAQRCFVSYIRSVYLMKNKEIFDVSTL 494
>UNIPROTKB|H7C452 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 HGNC:HGNC:2741 ChiTaRS:DDX18
EMBL:AC009312 EMBL:AC009404 ProteinModelPortal:H7C452 PRIDE:H7C452
Ensembl:ENST00000415038 Bgee:H7C452 Uniprot:H7C452
Length = 214
Score = 578 (208.5 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 106/123 (86%), Positives = 115/123 (93%)
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+MVFFSSCMSVK+H+ELLNYIDLPV+ IHGKQKQ KRTTTFFQFCNA++G LLCTDVAAR
Sbjct: 92 LMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAAR 151
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIP 764
GLDIP VDWIVQYDPPDDPKEYIHRVGRTARG GHALLILRPEELGFLRYLKQ+K+P
Sbjct: 152 GLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVP 211
Query: 765 LNE 767
L+E
Sbjct: 212 LSE 214
Score = 271 (100.5 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 52/85 (61%), Positives = 60/85 (70%)
Query: 535 NTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXX 594
NTP F+YKNLQCL+IDEADRILD+GFEE++KQI+ LLP RRQTMLFS
Sbjct: 1 NTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQTMLFSATQTRKVEDLARI 60
Query: 595 XXXXXPVYIGVDDTKEEATVAGLEQ 619
P+Y+GVDD K ATV GLEQ
Sbjct: 61 SLKKEPLYVGVDDDKANATVDGLEQ 85
Score = 100 (40.3 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 22/46 (47%), Positives = 24/46 (52%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQ 221
RRQTMLFS P+Y+GVDD K ATV GLEQ
Sbjct: 40 RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQ 85
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 167/421 (39%), Positives = 257/421 (61%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 STDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F +LQ L++DEADRILD+GF + M ++ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ Y+VC +
Sbjct: 257 TKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAK 762
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P E ++ L Q K
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEKAMVQQLLQKK 434
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
+P+ E + + K+ D+Q +LE +++++ L + F +YVR+ K++FD+ +
Sbjct: 435 VPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLP 494
Query: 823 L 823
+
Sbjct: 495 I 495
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 167/421 (39%), Positives = 257/421 (61%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 STDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F +LQ L++DEADRILD+GF + M ++ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ Y+VC +
Sbjct: 257 TKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAK 762
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P E ++ L Q K
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEKAMVQQLLQKK 434
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
+P+ E + + K+ D+Q +LE +++++ L + F +YVR+ K++FD+ +
Sbjct: 435 VPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLP 494
Query: 823 L 823
+
Sbjct: 495 I 495
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 169/422 (40%), Positives = 258/422 (61%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 STDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F NLQ L++DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ Y++C
Sbjct: 257 TKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLTKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P EE G ++ L Q
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEEQGMVQQLLQK 434
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+ E + + K+ D+Q +LE ++++ L + F +Y+R+ K++FD++ +
Sbjct: 435 KVPVKEIKINPEKLIDVQKRLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFDVNKL 494
Query: 822 DL 823
+
Sbjct: 495 PI 496
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 171/422 (40%), Positives = 258/422 (61%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 SADGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F NLQ L++DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ Y+VC +
Sbjct: 257 TKSVKDLARLSLKN-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGVSLLALHGRQQQMRRMEVYNEFVRKRAAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P EE G ++ L Q
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEEKGMVQQLLQK 434
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+ E + + K+ D+Q +LE ++++ L + F +Y+R+ K+IFD+ +
Sbjct: 435 KVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFISYIRSVYLMKDKEIFDVSKL 494
Query: 822 DL 823
+
Sbjct: 495 PI 496
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 820 (293.7 bits), Expect = 9.4e-82, P = 9.4e-82
Identities = 168/422 (39%), Positives = 257/422 (60%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+++ INI+V
Sbjct: 138 STDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVC 196
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F NLQ L++DEADRILD+GF + M I+ LPK+RQT+LFS
Sbjct: 197 TPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQ 256
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ Y++C
Sbjct: 257 TKSVKDLARLSLKD-PEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLKKK 315
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+VFFSSC V++ + + + + ++ +HG+Q+QM+R + +F +L TD+A
Sbjct: 316 SIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIA 375
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHR GRTAR + G ALLIL P EE G ++ L Q
Sbjct: 376 ARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYK-EDGEALLILLPSEEQGMVQQLLQK 434
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTM 821
K+P+ E + + K+ D+Q +LE ++++ L + F +Y+R+ K++F++ +
Sbjct: 435 KVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFNVSKL 494
Query: 822 DL 823
+
Sbjct: 495 PI 496
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 778 (278.9 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 170/424 (40%), Positives = 249/424 (58%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ E TL + F +T+IQ+R I L+GRD++G+AKTGSGKTLAFLVP +E +Y +
Sbjct: 55 ISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQ 114
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINII 522
+ +G G +IISPTREL++Q F VL+++ +YH + GL++GG S + E ++L + +NI+
Sbjct: 115 WSDHDGLGALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKEEQERLGR-MNIL 173
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
V TPGR+L HL T F NLQ L++DEADRI+D+GF++ + I+ LP RQT+LFS
Sbjct: 174 VCTPGRMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPPERQTLLFSA 233
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
P Y+ V + AT + L+Q YVV P
Sbjct: 234 TQTKKVSDLARLSLQD-PEYVAVHEAASSATPSKLQQHYVVTPLPQKLDTLWSFIRSNLK 292
Query: 643 XXVMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
+VF SS V+F +E ++ +P++ +HG+QKQ R +F A+ +L TD
Sbjct: 293 SKTIVFMSSGKQVRFVYESFRHMQPGIPLLHLHGRQKQGGRLDITTRFSQAQHAVLFSTD 352
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLK 759
VAARGLD PAVDW++Q D P+D YIHRVGRTAR E G A+L L P EE G LR L+
Sbjct: 353 VAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYE-RDGRAVLFLDPSEEKGMLRRLE 411
Query: 760 QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDID 819
Q ++ + +K I+ QL+ + K+ L G++AF +YV++ K+ F++
Sbjct: 412 QKRVTVERINVRANKQQSIKNQLQNMCFKDPELKYLGQKAFISYVKSVYIQKDKETFNLK 471
Query: 820 TMDL 823
+ L
Sbjct: 472 ELKL 475
Score = 43 (20.2 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 783 EKLI-SKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDLGKDSK 828
EKL+ SK L GK Y ++H L ++ D + D+K
Sbjct: 637 EKLLKSKKKLLKFKGKGTKLVYDDEGNAHELYEMEDEEAFKARGDAK 683
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 164/417 (39%), Positives = 248/417 (59%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ TLK + + + + TEIQ +TI L+GRD++G+AKTGSGKTLAFL+P +E +Y ++
Sbjct: 79 KKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQWT 138
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G +IISPTREL+ QTF VL+++ K H + GL++GG + E++K+ + NII+
Sbjct: 139 AMDGLGALIISPTRELAYQTFEVLRKVGKNHEFSAGLVIGGKDLKDESEKIHR-TNIIIC 197
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ T F +L L++DEADRILD+GF + + IV LPK RQT+LFS
Sbjct: 198 TPGRLLQHMDETATFHASDLHMLVLDEADRILDMGFADTLNAIVENLPKSRQTLLFSATQ 257
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P Y+ V + + +T A LEQ YVVC
Sbjct: 258 TRSVKDLARLSLKD-PEYVWVHEQAKFSTPATLEQNYVVCELHQKVNMLYSFLRSHLQKK 316
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
++VFF+ C V++ + + + V+ +HGKQ+QMKR + F + +L TD+A
Sbjct: 317 IIVFFACCKEVQYLFRIFCRLRPGISVLALHGKQQQMKRVEVYNDFVRKTSAVLFATDIA 376
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQA 761
ARGLD PAV+W++Q+D P+D YIHRVGRTAR + G ALL+L P EE G + L++
Sbjct: 377 ARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYK-EGGEALLVLLPSEEKGMISQLQEK 435
Query: 762 KIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDI 818
K+P+N+ + + K+ +Q +LE +++ + F +Y+R+ K +FD+
Sbjct: 436 KVPINKIQVNPEKLMSVQQKLEAFLAQEKEQKERAQRCFVSYLRSVYLMKNKDVFDV 492
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 172/447 (38%), Positives = 256/447 (57%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S+T F+ L + + TLKA+ + F K+T+IQ ++P L GRD++G+AKTGSGKTL+F+
Sbjct: 139 SATDFKDLP--ISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFI 196
Query: 452 VPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
+P +E ++ ++ +G G I++SPTREL++Q F VLK + KYH + GLI+GG + Q E
Sbjct: 197 LPILETLWRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGLIIGGRNVQQE 256
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
K+ +NI++ATPGRLL H+ T F NL+ L++DEADRILD+GF + + IV L
Sbjct: 257 KDKI-NAMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENL 315
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
P+ RQT+LFS P YI V + T L Q V P E
Sbjct: 316 PRERQTLLFSATQTKSIRDLARLSLQE-PEYISVYEKDITTTPQNLTQTLCVIPLEMKLN 374
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFC 689
++VFF+SC V+F HE ++ + +HGK KQ R F FC
Sbjct: 375 MLFSFIKTHLTSKIIVFFASCKQVRFAHETFKLLNPGTTLFPLHGKMKQWTRLEVFEDFC 434
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
+ G L TD+AARGLD PAV+W++Q D PDD + YIHRVGRTAR + + G ++ IL P
Sbjct: 435 KKKAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHRVGRTARND-APGQSITILLP 493
Query: 750 EEL-GFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYD 808
E G + +++ K+ E + K+ I +L +S+ L +++F +Y+R+
Sbjct: 494 SEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKSFVSYLRSVY 553
Query: 809 SHHLKQIFDIDTMDLGKDSKHTCVLMT 835
K+IF I +++ + SK +L T
Sbjct: 554 RQSNKEIFKIQELNINEFSKSLGLLGT 580
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 170/433 (39%), Positives = 247/433 (57%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
LS T + + + T A+ + F +TEIQ + IP L+GRD++G+AKTGSGKTLAF
Sbjct: 34 LSETVDHFAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAF 93
Query: 451 LVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
+VP +E +Y K+ +G G ++ISPTREL++QTF L ++ + H + GLI+GG + +
Sbjct: 94 IVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKE 153
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
E ++L++ +NI+V TPGRLL H+ F LQ LI+DEADRILD+GF + IV+
Sbjct: 154 EKERLSR-MNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSS 212
Query: 571 LPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXX 630
LP RQTMLFS P +I V + +T + L Q Y+ P
Sbjct: 213 LPVHRQTMLFSATQTKSVKDLARLSLQN-PDFISVHENDTSSTPSNLNQFYLTVPLTEKL 271
Query: 631 XXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQF 688
+VF SSC V+F +E + + ++ +HGKQKQ RT +F
Sbjct: 272 DILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKF 331
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
++ +L CTD+ ARGLD PAVDW++Q D P+D YIHRVGRTAR SG+ALL+L
Sbjct: 332 TSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHRVGRTAR-YNRSGNALLLLL 390
Query: 749 PEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYD 808
P E FL+ L+ KI + K + I+ QL+ L K+ + G++AF +Y+R+
Sbjct: 391 PSEEAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFKDNDIKYIGQKAFISYLRSIY 450
Query: 809 SHHLKQIFDIDTM 821
K +F +D +
Sbjct: 451 LQKDKDVFQLDKL 463
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 758 (271.9 bits), Expect = 3.5e-75, P = 3.5e-75
Identities = 171/445 (38%), Positives = 257/445 (57%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
L ST + + E T K + D F +T+IQAR IP L+GRD++G+AKTGSGKTLAF
Sbjct: 44 LKSTPKAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAF 103
Query: 451 LVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
LVP +E +Y ++ G +++SPTREL++QTF VL+++ ++H + GL++GG S +
Sbjct: 104 LVPLLEKLYREQWTQEAKLGALVLSPTRELAVQTFQVLRKIGRHHLFSAGLVIGGKSVRE 163
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
EA+ L++ +NI++ TPGR+L HL T F NLQ L++DEADRI+D+GF+ D+ +V
Sbjct: 164 EAEALSR-MNILIGTPGRILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQH 222
Query: 571 LPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXX 630
LP RQT+LFS P Y+ V AT + L+Q Y+V P
Sbjct: 223 LPTTRQTLLFSATQSKKVSDLARLSLKD-PEYVSVHAEATTATPSTLQQHYIVTPLPEKL 281
Query: 631 XXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQF 688
++VF SS V+F +E + +P++ +HG+QKQ+ R +F
Sbjct: 282 DTLWGFIKANLKSKMVVFLSSGKQVRFVYESFRQMQPGIPLLHMHGRQKQLARLDVTKRF 341
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
+++ L TDV ARG+D VDW+VQ D P+D +YIHRVGRTAR E G A++ L
Sbjct: 342 DSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRVGRTARYE-REGKAVIFLD 400
Query: 749 P-EELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAY 807
P EE G L+ L++ K+P+ + SK I+ +L+ + K++ + ++AF +Y RA
Sbjct: 401 PSEEAGMLKRLERKKVPITKVTAKDSKKKSIRDELQSICWKSHDVKYLAQKAFISYARAV 460
Query: 808 ------DSHHLK---QIFDIDTMDL 823
D H + Q+F D +DL
Sbjct: 461 HRATERDEKHNENSDQVFKFDKLDL 485
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 165/436 (37%), Positives = 240/436 (55%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ + T + + D + MT++Q+ IP L GRD++G+A+TGSGKTLAF++P +E ++ +
Sbjct: 78 ISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRER 137
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINII 522
+ P +G G IIISPTREL+ QTFGVL ++ K+H + GL++GG ++ +NI+
Sbjct: 138 WSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNIL 197
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
V PGRLL H+ TP F LQ LI+DEADR+LD F+ + I++ LPK RQT+LFS
Sbjct: 198 VCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSA 257
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
P YI V AT L Q ++ P E
Sbjct: 258 TQTKKVKDLARLSLRD-PEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLN 316
Query: 643 XXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++VF S+ VKF HE N + +P+ +HGK Q KR + QF ++ +L CTD
Sbjct: 317 SRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQS-VLFCTD 375
Query: 701 VAARGLDIP-AVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLK 759
V ARGLD AVDW+VQ D P+D YIHRVGRTAR + G +LL L P E + L+
Sbjct: 376 VLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFY-TQGKSLLFLTPSEEKMIEKLQ 434
Query: 760 QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDID 819
+AK+P+ + + K+ ++ L L+ K L + AF Y+R+ K+IFD+
Sbjct: 435 EAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHKRRDKEIFDVS 494
Query: 820 TMDLGKDSKHTCVLMT 835
+ + S + MT
Sbjct: 495 KLSIENFSASLGLPMT 510
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 156/419 (37%), Positives = 244/419 (58%)
Query: 407 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 466
TL+ + D +TK TEIQ TI L G D+VG+AKTGSGKTLA ++P +E ++ K+ P
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPD 146
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
G G +IISPTREL++QTF + + +H + GL++GG+ E +++ GINIIV TP
Sbjct: 147 YGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTP 205
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLL H+ + +LQ L++DEADR+LD+GF + + I+N LP RQT+LFS
Sbjct: 206 GRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTR 265
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
PV++ V + AT L+Q YV+ E +
Sbjct: 266 NVKDLCRVCTND-PVFVSVHENASAATPDNLKQSYVIVEEEHKINALWSFIEAHRKKKSL 324
Query: 647 VFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
VF SSC +F E + + LPVM + G Q KR TF +F ++ +L+ TDVA+R
Sbjct: 325 VFVSSCKQARFLTEAFSQLRPGLPVMGLWGTMNQKKRIETFTKFDESKAAVLIATDVASR 384
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EELGFLRYLKQAKI 763
GLD +DW++Q D P +YIHRVGR+AR + SG++LL++ P +E + L++ I
Sbjct: 385 GLDFEHIDWVIQVDCPAQIDDYIHRVGRSARMD-DSGNSLLMVSPSQEEAMIGKLEKHSI 443
Query: 764 PLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
P+ E + +SD++++L +++++ L +++ AY+R+ + K++FD++ +D
Sbjct: 444 PIEELKIHPDAMSDVRVKLRAILAESQELKEYAQKSIVAYLRSIYTMKDKKVFDVEAID 502
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 165/434 (38%), Positives = 240/434 (55%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S +QF L + ENTLK + + F +T+IQ +TIP L+G DL+G+A+TGSGKTLAFL
Sbjct: 46 SVSQFSDLP--ITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFL 103
Query: 452 VPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
+P +E + K +G +I+SPTREL++Q F VL ++ KY+ + GL+ GG Q E
Sbjct: 104 IPVIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYNTFSAGLVTGGKDVQFE 163
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+++++ +NI+V TPGR+ HL NLQ L++DEADR LD+GF++ + I+ L
Sbjct: 164 KERVSR-MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHL 222
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKE-EATVAGLEQGYVVCPSEXXX 630
P RQT+LFS P IGV +E AT LEQ YV P +
Sbjct: 223 PTTRQTLLFSATQSESVNDLARLSLTN-PNKIGVSSDQEVSATPESLEQYYVKVPLDEKL 281
Query: 631 XXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQF 688
++VFFSS V++ +E + + +M ++G+ KQ R T +F
Sbjct: 282 DVLWSFIKSHLKSKILVFFSSSKQVQYTYETFRTLQPGISLMKLYGRHKQTSRLETTMKF 341
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
A+ L TD+ ARGLD PA+DW+VQ D P+D Y+HRVGR+AR G G +LL+L
Sbjct: 342 SQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARF-GRKGKSLLMLL 400
Query: 749 P-EELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAY 807
P EE G L+ LK KI I+ QL+ L K+ + G+ AF AY ++
Sbjct: 401 PSEEEGMLKRLKIHKIEPKLMNIKQKSKKSIRPQLQSLCFKDPVMKNLGQRAFIAYFKSV 460
Query: 808 DSHHLKQIFDIDTM 821
K +F ++ +
Sbjct: 461 HIQKDKDVFKVEEL 474
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 170/443 (38%), Positives = 245/443 (55%)
Query: 388 PSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 447
P I + F+ L + + TLK + + F K+TEIQA +IP L+G D++ +AKTGSGKT
Sbjct: 35 PKITKAKFFKDLP--ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKT 92
Query: 448 LAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGAS 507
LAFLVP +E +Y K+ +G G +IISPTREL+MQ + VL ++ + + GL++GG
Sbjct: 93 LAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKD 152
Query: 508 RQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQI 567
+ E +++++ INI++ TPGR+L HL NLQ L++DEADR LD+GF++ + I
Sbjct: 153 VKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAI 211
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDT------KEEATVAGLEQGY 621
V+ L RQT+LFS +G D KE +T L+Q Y
Sbjct: 212 VSTLSPSRQTLLFSATQSQSVADLARLSLTDYKT-VGTHDVMDGSVNKEASTPETLQQFY 270
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQM 679
+ P ++VF SS V F +E + + +M +HG+QKQ
Sbjct: 271 IEVPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQR 330
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
RT T +F A+ L TDV ARG+D PAVDW+VQ D P+D YIHRVGR AR G
Sbjct: 331 ARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGRCAR-YGK 389
Query: 740 SGHALLILRPEEL-GFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G +L++L P+E FL+ L KI + SK I+ QL+ L+ K+ L G++
Sbjct: 390 KGKSLIMLTPQEQEAFLKRLNARKIEPGKLNIKQSKKKSIKPQLQSLLFKDPELKYLGQK 449
Query: 799 AFKAYVRAYDSHHLKQIFDIDTM 821
AF +YVR+ KQ+F D +
Sbjct: 450 AFISYVRSIYVQKDKQVFKFDEL 472
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 162/440 (36%), Positives = 243/440 (55%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+F LK + E+ ++A+ GF T +QA TIP L +D+V A TGSGKTLAFL+P
Sbjct: 15 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF 74
Query: 455 VELIYNLKFMPRNGTGI--IIISPTRELSMQTFGVLKELMKYHHHTYG-LIMGGASRQAE 511
+E+I P + +IISPTRELS Q V + + + L++GG +A+
Sbjct: 75 IEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEAD 134
Query: 512 AQKLAK-GINIIVATPGRLLDHLQNTPEFL-YKNLQCLIIDEADRILDIGFEEDMKQIVN 569
L + G N+++ TPGRL D ++ EFL ++NL+ LI+DEADR+LD+GF++ + I++
Sbjct: 135 MNTLEEEGANLLIGTPGRLSDMMKRM-EFLDFRNLEILILDEADRLLDMGFQKQVNYIIS 193
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXX 629
LPK+R+T LFS I ++K + T +GL Y+ C ++
Sbjct: 194 RLPKQRRTGLFSATQTQAVADLAKAGLRNAMEVISGAESKSK-TSSGLYCEYLKCEADQK 252
Query: 630 XXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI----DLPVMCIHGKQKQMKRTTTF 685
++VFF +C V + +L+ I + HGK Q R T
Sbjct: 253 SSQLVHLLIENKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTAL 312
Query: 686 FQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALL 745
F A +G+LLCTDVAARGLDIP +D++VQYDPP DP +IHRVGRTAR E G A++
Sbjct: 313 ASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARME-RQGRAIV 371
Query: 746 ILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVR 805
L P+E ++ +++ ++PL E + S SD+ + L K+ + G +AF ++VR
Sbjct: 372 FLMPKETDYVEFMRIRRVPLQERKCS-ENASDVIPIIRSLAIKDRAVLEKGLQAFVSFVR 430
Query: 806 AYDSHHLKQIFDIDTMDLGK 825
AY HH IF +++GK
Sbjct: 431 AYKEHHCSYIFSWKGLEIGK 450
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 159/448 (35%), Positives = 247/448 (55%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
++ ++ +L K+ +N L+ + ++GFT MT +Q+ IP + +D+ A TGSGKTLAF
Sbjct: 4 ITDGKWGSLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAF 63
Query: 451 LVPAVELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASR 508
++PA+E++ + + + G +II+PTREL+MQ V+ ++ + T L++GG++
Sbjct: 64 VIPALEILLKREEKLKKMQVGALIITPTRELAMQISEVMGRFLQGFPQFTQILLIGGSNP 123
Query: 509 QAEAQKL-AKGINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEE 562
+ +KL +G NII+ATPGRL D + + L K+L L++DEADR+LD+GFE
Sbjct: 124 IEDVEKLKTQGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEA 183
Query: 563 DMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGL 617
+ I+ LPK+R+T LFS PV I GV + + T A L
Sbjct: 184 SLNTILGYLPKQRRTGLFSATQTQELEKLVRAGLRN-PVRITVKEKGVAASSVQKTPAKL 242
Query: 618 EQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGK 675
Y +C +E +VFFS+C V++ + L + ++ + CIHGK
Sbjct: 243 SNYYTMCRAEEKFNTLVAFLRQHKHEKQLVFFSTCACVEYFGKALEVLVKNVSIHCIHGK 302
Query: 676 QKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 735
K KR F F ++GIL+CTDV ARG+DIP V+W++QYDPP ++HR GRTAR
Sbjct: 303 MKH-KRNKIFADFRALKSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTAR 361
Query: 736 GEGSSGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNM 794
G+ G+AL+ L P E ++ +L K PL F S + D+ +L+ + + +
Sbjct: 362 -IGNQGNALVFLLPMEESYVNFLSINQKCPLQSFS-SVKDVVDVLPKLKAMALGDRAMFE 419
Query: 795 SGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
G AF +YV+AY H IF I +D
Sbjct: 420 KGMRAFVSYVQAYAKHECSLIFRIKDLD 447
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 159/443 (35%), Positives = 240/443 (54%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKF-MPR 466
L+A+ D+GF +MT +Q+ TIP + +D+ A TGSGKTLAF++P +E++ + + +
Sbjct: 21 LRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKK 80
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYG--LIMGGASRQAEAQKLAK-GINIIV 523
G III+PTREL++Q VL K H + L++GG + + +K + G NIIV
Sbjct: 81 MQVGAIIITPTRELAIQIDEVLTHFTK-HFPKFSQILLIGGRNPMEDVEKFKEHGGNIIV 139
Query: 524 ATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTM 578
ATPGRL D + + L K+L L++DEADR+LD+GFE + I+ LPK+R+T
Sbjct: 140 ATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTG 199
Query: 579 LFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
LFS PV I GV T + T LE Y++C ++
Sbjct: 200 LFSATQTQEVENLVRAGLRN-PVRISVKEKGVAATNTQKTPTRLENYYMICKADEKFNQL 258
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNA 691
+VFFS+C V+++ + L + + +MCIHGK K KR F +F
Sbjct: 259 VHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH-KRNKIFTEFRRL 317
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
GIL+CTDV ARG+DIP V W++QYDPP ++HR GRTAR G++G AL+ L P E
Sbjct: 318 AGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTAR-IGNAGSALVFLLPME 376
Query: 752 LGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH 810
++ +L K P+ E + + D+ +L+ + + + G +AF +Y++AY H
Sbjct: 377 ESYINFLSINQKCPMQEMQ-PQRNVLDLLPKLKSMALADRAVFEKGMKAFVSYIQAYAKH 435
Query: 811 HLKQIFDIDTMDLGKDSKHTCVL 833
IF I +D +K +L
Sbjct: 436 ECNLIFRIKDLDFASLAKGFALL 458
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 158/443 (35%), Positives = 242/443 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L ++ L A+ +GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQ 513
E++ + + +N G III+PTREL++Q VL K + + L +GG + +
Sbjct: 69 EILLRREEKLKKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVS 128
Query: 514 KLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQI 567
+ + G NIIVATPGRL D + E L K+L+ L++DEADR+LD+GFE + I
Sbjct: 129 RFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTI 188
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGYV 622
+ LPK+R+T LFS PV I GV + + T + LE Y+
Sbjct: 189 LEFLPKQRRTGLFSATQTQEVESLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENYYM 247
Query: 623 VCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMK 680
VC ++ ++FFS+C V+++ + L + + +MCIHGK K K
Sbjct: 248 VCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKH-K 306
Query: 681 RTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSS 740
R F +F ++GIL+CTDV ARG+DIP V+W++QYDPP ++HR GRTAR G
Sbjct: 307 RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTAR-IGHG 365
Query: 741 GHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEA 799
G AL+ L P E ++ +L+ K PL E + D+ +L+ + + + G +A
Sbjct: 366 GSALVFLLPMEESYVTFLEINQKCPLQEMKLQ-KNTGDLLPKLKSMALADRAVFEKGMKA 424
Query: 800 FKAYVRAYDSHHLKQIFDIDTMD 822
F +YV+AY H IF + +D
Sbjct: 425 FVSYVQAYAKHECNLIFRLKDLD 447
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 159/443 (35%), Positives = 239/443 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKF-MPR 466
L A+ D+GF +MT +Q+ TIP + +D+ A TGSGKTLAF++P +E++ + + +
Sbjct: 21 LLALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKK 80
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYG--LIMGGASRQAEAQKLAK-GINIIV 523
G III+PTREL++Q VL K H + L++GG + + +K + G NIIV
Sbjct: 81 MQVGAIIITPTRELAIQIDEVLTHFTK-HFPKFSQILLIGGRNPMEDVEKFKEHGGNIIV 139
Query: 524 ATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTM 578
ATPGRL D + + L K+L L++DEADR+LD+GFE + I+ LPK+R+T
Sbjct: 140 ATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTG 199
Query: 579 LFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
LFS PV I GV T + T LE Y++C ++
Sbjct: 200 LFSATQTQEVENLVRAGLRN-PVRISVKEKGVAATNTQKTPTRLENYYMICKADEKFNQL 258
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNA 691
+VFFS+C V+++ + L + + +MCIHGK K KR F +F
Sbjct: 259 VHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMCIHGKMKH-KRNKIFTEFRRL 317
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
GIL+CTDV ARG+DIP V W++QYDPP ++HR GRTAR G++G AL+ L P E
Sbjct: 318 AGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTAR-IGNAGSALVFLLPME 376
Query: 752 LGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH 810
++ +L K P+ E + + D+ +L+ + + + G +AF +Y++AY H
Sbjct: 377 ESYINFLSINQKCPMQEMQ-PQRNVLDLLPKLKSMALADRAVFEKGMKAFVSYIQAYAKH 435
Query: 811 HLKQIFDIDTMDLGKDSKHTCVL 833
IF I +D +K +L
Sbjct: 436 ECNLIFRIKDLDFASLAKGFALL 458
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 158/446 (35%), Positives = 242/446 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L ++ L A+ +GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQ 513
E++ + + +N G III+PTREL++Q VL K + + L +GG + +
Sbjct: 69 EILLRREEKLKKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQILWIGGRNPADDVS 128
Query: 514 KLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQI 567
+ + G NIIVATPGRL D + E L K+L+ L++DEADR+LD+GFE + I
Sbjct: 129 RFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTI 188
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGYV 622
+ LPK+R+T LFS PV I GV + + T + LE Y+
Sbjct: 189 LEFLPKQRRTGLFSATQTQEVESLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENYYM 247
Query: 623 VCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMK 680
VC ++ ++FFS+C V+++ + L + + +MCIHGK K K
Sbjct: 248 VCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIHGKMKH-K 306
Query: 681 RTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSS 740
R F +F ++GIL+CTDV ARG+DIP V+W++QYDPP ++HR GRTAR G
Sbjct: 307 RNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTAR-IGHG 365
Query: 741 GHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEA 799
G AL+ L P E ++ +L+ K PL E + D+ +L+ + + + G +A
Sbjct: 366 GSALVFLLPMEESYVTFLEINQKCPLQEMKLQ-KNTGDLLPKLKSMALADRAVFEKGMKA 424
Query: 800 FKAYVRAYDSHHLKQIFDIDTMDLGK 825
F +YV+AY H IF + L +
Sbjct: 425 FVSYVQAYAKHECNLIFRLKAKILAR 450
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 157/444 (35%), Positives = 243/444 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L+ + L A+ ++GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM--GGASRQAEA 512
E++ + + +N G I+I+PTREL++Q VL K H + I+ GG + +
Sbjct: 69 EILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTK-HFPQFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQ 566
++ + G NIIVATPGRL D + E L K+L L++DEADR+LD+GFE +
Sbjct: 128 ERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV I GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
++C ++ +VFFS+C V+++ + L + + ++CIHGK K
Sbjct: 247 MICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALLKKVKILCIHGKMKY- 305
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP + ++HR GRTAR G
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTAR-IGH 364
Query: 740 SGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G AL+ L P E ++ +L K PL E + I D+ +L + + + G +
Sbjct: 365 GGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTI-DLLPKLRAMALADRAVFEKGMK 423
Query: 799 AFKAYVRAYDSHHLKQIFDIDTMD 822
AF ++V+AY H IF + +D
Sbjct: 424 AFVSFVQAYAKHECSLIFRLKDLD 447
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 160/461 (34%), Positives = 250/461 (54%)
Query: 382 DVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAK 441
D S +I L+ T+F L+ + + ++A+ F T +QA TIP L +D+ A
Sbjct: 2 DSSANINKALTETRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAA 61
Query: 442 TGSGKTLAFLVPAVELIY-NLKFMPRNGTGI-IIISPTRELSMQTFGVLKELMKYHHHTY 499
TGSGKTLAF+VP VE++ + F P+ + +IISPTRELS Q + V + + +
Sbjct: 62 TGSGKTLAFVVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVN 121
Query: 500 G-LIMGGASRQAEAQKLAK-GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILD 557
L++GG +A+ + + + G N+++ TPGRL D ++ ++NL+ LI+DEADR+L+
Sbjct: 122 SVLLVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLE 181
Query: 558 IGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVD-DTKEEA---- 612
+GF+ + I++ LPK+R+T LFS PV + V +K E+
Sbjct: 182 MGFQRQVNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRN-PVRVEVRAKSKSESSQQL 240
Query: 613 ----TVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--- 665
T +GL Y+ C ++ ++VFF +C SV + +L+ I
Sbjct: 241 TNSKTPSGLHLEYMECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPAL 300
Query: 666 -DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPK 724
+ ++ IHG KQ R F A +G LLCTDVAARGLDIP +D++VQYDPP DP
Sbjct: 301 KSISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPN 360
Query: 725 EYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEK 784
+ HR GRTAR G G A++ L P+E ++ +++ ++PL E + S SD+ +
Sbjct: 361 MFNHRAGRTAR-LGRQGRAIVFLLPKEEAYVEFMRIRRVPLEERKCS-EDASDVIPIIRS 418
Query: 785 LISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDLGK 825
K+ + G +AF ++VRAY HH IF +++GK
Sbjct: 419 AAMKDRAVMEKGLKAFVSFVRAYKEHHCSFIFRWKDLEIGK 459
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 157/444 (35%), Positives = 243/444 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L+ + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLQVPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM--GGASRQAEA 512
E++ + + +N G I+I+PTREL++Q VL K H + I+ GG + +
Sbjct: 69 EILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTK-HFPQFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL----Y-KNLQCLIIDEADRILDIGFEEDMKQ 566
++ + G NIIVATPGRL D + E L Y K+L L++DEADR+LD+GFE +
Sbjct: 128 ERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMGFEASINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV I GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
++C ++ +VFFS+C V+++ + L + + ++CIHGK K
Sbjct: 247 MICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVKILCIHGKMKY- 305
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP + ++HR GRTAR G
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTAR-IGH 364
Query: 740 SGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G AL+ L P E ++ +L K PL E + + D+ +L + + + G +
Sbjct: 365 GGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTV-DLLPKLRAMALADRAVFEKGMK 423
Query: 799 AFKAYVRAYDSHHLKQIFDIDTMD 822
AF ++V+AY H IF + +D
Sbjct: 424 AFVSFVQAYAKHECSLIFRLKDLD 447
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 159/444 (35%), Positives = 242/444 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P V
Sbjct: 9 WESLPVPLHPQVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIV 68
Query: 456 ELIYNL--KFMPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEA 512
E++ KF ++ G III+PTREL++Q VL K + + L +GG + +
Sbjct: 69 EILLRREEKFK-KSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQ 566
+ + G NIIVATPGRL D + E L ++L+ L++DEADR+LD+GFE +
Sbjct: 128 ARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV I GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
+VC ++ +VFFS+C V+++ + L + + +MCIHGK K
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKY- 305
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP + ++HR GRTAR G
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTAR-IGH 364
Query: 740 SGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G AL+ L P E ++ +L K PL E + +D+ +L+ + + + G +
Sbjct: 365 GGSALVFLLPMEESYISFLAINQKCPLQEMKLQ-KNTADLLPKLKAMALGDRAVFEKGMK 423
Query: 799 AFKAYVRAYDSHHLKQIFDIDTMD 822
AF +YV+AY H IF + +D
Sbjct: 424 AFVSYVQAYAKHECNLIFRLKDLD 447
>UNIPROTKB|F6XWM4 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969
Ensembl:ENSCAFT00000035837 EMBL:AAEX03014637 OMA:DADNVFA
Uniprot:F6XWM4
Length = 734
Score = 592 (213.5 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 144/397 (36%), Positives = 216/397 (54%)
Query: 442 TGSGKTLAFLVPAVELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTY 499
TGSGKTLAF++P +E++ + + +N G III+PTREL++Q VL K + +
Sbjct: 190 TGSGKTLAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQVDEVLAHFTKSFPQFSQ 249
Query: 500 GLIMGGASRQAEAQKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEAD 553
L +GG + + + + G NIIVATPGRL D + E L K+L+ L++DEAD
Sbjct: 250 ILWIGGRNPADDVSRFKEQGGNIIVATPGRLEDMFRRKVEGLDLASCVKSLEVLVLDEAD 309
Query: 554 RILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDT 608
R+LD+GFE + I+ LPK+R+T LFS PV I GV +
Sbjct: 310 RLLDMGFEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRN-PVRISVKEKGVAAS 368
Query: 609 KEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--D 666
+ T + LE Y+VC ++ ++FFS+C V+++ + L +
Sbjct: 369 STQKTPSRLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKS 428
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
+ +MCIHGK K KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP +
Sbjct: 429 VKIMCIHGKMKH-KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAF 487
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKL 785
+HR GRTAR G G AL+ L P E ++ +L+ K PL E + D+ +L+ +
Sbjct: 488 VHRCGRTAR-IGHGGSALVFLLPMEESYVTFLEINQKCPLQEMKLQ-KNTGDLLPKLKSM 545
Query: 786 ISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
+ + G +AF +YV+AY H IF + +D
Sbjct: 546 ALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLD 582
Score = 76 (31.8 bits), Expect = 9.9e-64, Sum P(2) = 9.9e-64
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGK 446
+E+L ++ L A+ +GF MT +Q+ TIP ++ +D+ A + S K
Sbjct: 113 WESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVSTSWK 163
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 157/444 (35%), Positives = 242/444 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM--GGASRQAEA 512
E++ + + ++ G III+PTREL++Q VL K H + I+ GG + +
Sbjct: 69 EILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTK-HFPEFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQ 566
++ + G NIIVATPGRL D + E L ++L L++DEADR+LD+GFE +
Sbjct: 128 ERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV + GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
+VC ++ +VFFS+C V+++ + L + + +MCIHGK K
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY- 305
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP + ++HR GRTAR G
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTAR-IGH 364
Query: 740 SGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G AL+ L P E ++ +L K PL E + +D+ +L+ + + + G +
Sbjct: 365 GGSALVFLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKSMALADRAVFEKGMK 423
Query: 799 AFKAYVRAYDSHHLKQIFDIDTMD 822
AF +YV+AY H IF + +D
Sbjct: 424 AFVSYVQAYAKHECNLIFRLKDLD 447
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 158/444 (35%), Positives = 241/444 (54%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P
Sbjct: 9 WESLPVPLHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIE 68
Query: 456 ELIYNL--KFMPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEA 512
E++ KF ++ G III+PTREL++Q VL K + + L +GG + +
Sbjct: 69 EILLRREEKFK-KSQVGAIIITPTRELAVQIEEVLSHFTKPFPQFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQ 566
+ + G NIIVATPGRL D + E L ++L+ L++DEADR+LD+GFE +
Sbjct: 128 ARFKELGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV I GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGVAASSTQKTPSRLENHY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
+VC ++ +VFFS+C V+++ + L + + +MCIHGK K
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALETLVKGVKIMCIHGKMKY- 305
Query: 680 KRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGS 739
KR F +F ++GIL+CTDV ARG+DIP V+W++QYDPP + ++HR GRTAR G
Sbjct: 306 KRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTAR-IGH 364
Query: 740 SGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
G AL+ L P E ++ +L K PL E + +D+ +L+ + + + G +
Sbjct: 365 GGSALVFLLPMEESYISFLAINQKCPLQEMKLQ-KNTADLLPKLKAMALGDRAVFEKGMK 423
Query: 799 AFKAYVRAYDSHHLKQIFDIDTMD 822
AF +YV+AY H IF + +D
Sbjct: 424 AFVSYVQAYAKHECNLIFRLKDLD 447
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 156/454 (34%), Positives = 244/454 (53%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLPVPLHPRVLDVLQELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQ 513
E++ + + ++ G III+PTREL++Q VL K + + L +GG + +
Sbjct: 69 EILLRREEKLKKSQVGAIIITPTRELAVQIDEVLSHFTKPFPQFSQILWIGGRNPGEDVA 128
Query: 514 KLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQI 567
+ + G NIIVATPGRL D + E L K+L L++DEADR+LD+GFE + I
Sbjct: 129 RFKEHGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTI 188
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDD-----TKEEATVAGLEQGYV 622
+ LPK+R+T LFS PV I V + + + T + LE Y+
Sbjct: 189 LEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRISVKEKGAAASSTQKTPSRLENYYM 247
Query: 623 VCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMK 680
VC ++ +VFFS+C V+++ + L + + +MCIHGK K K
Sbjct: 248 VCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVRSVKIMCIHGKMKY-K 306
Query: 681 RTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSS 740
R F +F ++GIL+CTDV ARG+DIP V+W++QYDPP ++HR GRTAR G
Sbjct: 307 RNKIFMEFRQLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTAR-IGHG 365
Query: 741 GHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEA 799
G AL+ L P E ++ +L K PL + + + D+ +L+ + + + G +A
Sbjct: 366 GSALVFLLPMEESYVNFLAINQKCPLQAMKLQKNTV-DLLPKLKSMALADRAVFEKGMKA 424
Query: 800 FKAYVRAYDSHHLKQIFDIDTMDLGKDSKHTCVL 833
F +YV+AY H IF + +D ++ +L
Sbjct: 425 FVSYVQAYAKHECNLIFRLKDLDFASIARGFALL 458
>DICTYBASE|DDB_G0271708 [details] [associations]
symbol:ddx31 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0271708 GO:GO:0005524
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HSSP:P10081
RefSeq:XP_645498.1 ProteinModelPortal:Q869P0
EnsemblProtists:DDB0234202 GeneID:8618126 KEGG:ddi:DDB_G0271708
OMA:THIQEAS Uniprot:Q869P0
Length = 908
Score = 418 (152.2 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 92/236 (38%), Positives = 141/236 (59%)
Query: 379 ISADVSLSIPSILSSTQFEALKGKVCENTLK-AIADMGFTKMTEIQARTIPPLLEGRDLV 437
I +++ + SS + +L+ + E ++ + M K T IQ +I P+L+G D +
Sbjct: 192 IESNIKVEKSETFSSMNWGSLQ--LSETLVRNLVGHMKHEKPTHIQEASITPILKGNDAL 249
Query: 438 GSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMK-YHH 496
A+TGSGKTL++L+P V+ + + +G +II+PTRELS Q + L++L+K ++
Sbjct: 250 VKAQTGSGKTLSYLIPVVQKLTEQRVTRSDGCYCVIITPTRELSSQIYEELQKLLKPFYW 309
Query: 497 HTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRIL 556
G+IMGG +R AE ++ KGINI+VATPGRLLDHLQNT F N++ I+DEAD++L
Sbjct: 310 IVPGIIMGGENRSAEKARIRKGINILVATPGRLLDHLQNTQSFPTDNIKWCILDEADKLL 369
Query: 557 DIGFEEDMKQIVNLLPKRRQTMLFS------XXXXXXXXXXXXXXXXXXPVYIGVD 606
D+GFE+D+ I+NLL +++TM F PVYIG+D
Sbjct: 370 DLGFEKDVTTIINLLDSKKRTMKFKRQNILVSATLSEGISRLASLSLTSPVYIGLD 425
Score = 272 (100.8 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 52/103 (50%), Positives = 72/103 (69%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
+P+ +HG+ Q RT TFF F N+ GILL TDV+ARGLD+P+V+WIVQYDP D K+Y
Sbjct: 604 VPIFKLHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPSVNWIVQYDPCSDTKDY 663
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFE 769
IHR+GRTAR G+ G +LL L P E ++ +L + + + E +
Sbjct: 664 IHRIGRTAR-LGNQGCSLLFLLPSEKKYIDHLAKFNVSVKEMK 705
Score = 71 (30.1 bits), Expect = 2.4e-62, Sum P(3) = 2.4e-62
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 773 SKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHH--LKQIFDIDTMDLGKDSK 828
S++ D+QL E+ + + + A+++++R+Y +H +K IF I + LG SK
Sbjct: 732 SQVHDLQLLFERFLIYDSKAKEMARCAYQSFLRSYATHKADVKSIFHISYLHLGHVSK 789
Score = 65 (27.9 bits), Expect = 9.8e-41, Sum P(3) = 9.8e-41
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRT 682
++VFFSSC SV FHH + + + + K++ +KRT
Sbjct: 495 MIVFFSSCDSVDFHHYMFSNMKMD------KERGVKRT 526
Score = 38 (18.4 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 176 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVD 208
+RQ +L S PVYIG+D
Sbjct: 394 KRQNILVSATLSEGISRLASLSLTS-PVYIGLD 425
>FB|FBgn0037561 [details] [associations]
symbol:CG9630 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P10081 KO:K14809
GeneTree:ENSGT00550000074969 EMBL:AY051513 RefSeq:NP_649777.1
UniGene:Dm.1101 ProteinModelPortal:Q9VHU1 SMR:Q9VHU1 IntAct:Q9VHU1
STRING:Q9VHU1 PaxDb:Q9VHU1 PRIDE:Q9VHU1 EnsemblMetazoa:FBtr0081866
GeneID:40974 KEGG:dme:Dmel_CG9630 UCSC:CG9630-RA
FlyBase:FBgn0037561 InParanoid:Q9VHU1 OMA:CACVEYW OrthoDB:EOG4TDZ1Q
PhylomeDB:Q9VHU1 GenomeRNAi:40974 NextBio:821545 Bgee:Q9VHU1
GermOnline:CG9630 Uniprot:Q9VHU1
Length = 613
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 162/462 (35%), Positives = 241/462 (52%)
Query: 391 LSSTQFEAL-KGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 449
+S ++ +L K + + L+ + GF +MT +Q IP LL +D+ A TGSGKTLA
Sbjct: 1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLA 60
Query: 450 FLVPAVELIYNL-KFMP--RNGTGIIIISPTRELSMQTFGVLKELMKYH---HHTYGLIM 503
FLVP +E++ K P G ++ISPTREL+ Q VL + +++ H LI+
Sbjct: 61 FLVPMLEILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIV 120
Query: 504 GGASRQAEAQKLAKGIN-IIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILD 557
GG S + + L + I+V TPGRL D Q + L K+L+ L++DEADR+LD
Sbjct: 121 GGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLD 180
Query: 558 IGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGL 617
+GF+ + I+ LP++R+T LFS PV + V + T A L
Sbjct: 181 LGFKTSVNNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRN-PVLVSVKEKASVNTPARL 239
Query: 618 EQGY-VVCPS-EXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLP---VMCI 672
+ Y +V P + VMVFF +C V++ E L + LP V+ I
Sbjct: 240 QNFYRIVEPELKFVALLEFLSSPATVIGKVMVFFPTCACVEYWAEALPPL-LPKRTVLGI 298
Query: 673 HGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGR 732
HGK K KR +F N +LLCTDV ARGLD+P ++W+VQ+DPP ++HRVGR
Sbjct: 299 HGKMKN-KRANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGR 357
Query: 733 TARGEGSSGHALLILRPEELGFLRYLK-QAKIPLNEF--------EFSWSKISDIQLQLE 783
TAR +G+ G+AL+ L P E ++ +LK K+ L + + K+ + QL
Sbjct: 358 TAR-QGNEGNALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLH 416
Query: 784 KLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDLGK 825
+L + + + G AF ++VRAY H I + +DLGK
Sbjct: 417 RLQAADKGVYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGK 458
>POMBASE|SPBC24C6.02 [details] [associations]
symbol:SPBC24C6.02 "ATP-dependent RNA helicase Spb4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
PomBase:SPBC24C6.02 GO:GO:0005524 GO:GO:0005730 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
OMA:CACVEYW OrthoDB:EOG46MFT3 PIR:T39966 RefSeq:NP_595956.1
ProteinModelPortal:O74764 STRING:O74764 EnsemblFungi:SPBC24C6.02.1
GeneID:2540598 KEGG:spo:SPBC24C6.02 NextBio:20801723 Uniprot:O74764
Length = 606
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 151/439 (34%), Positives = 230/439 (52%)
Query: 410 AIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGT 469
A+A GF KMT +QA IP L+ +DLV A TGSGKTLA+L+P + + + G
Sbjct: 15 AVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFDKVTR-RDTDETGL 73
Query: 470 GIIIISPTRELSMQTFGVLKELMKYHHHTYG--------LIMGGASRQAE--AQKLAKGI 519
G +I++PTREL+ Q F V KEL+ Y + + +GG A K
Sbjct: 74 GALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFREKNP 133
Query: 520 NIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTML 579
++++ TPGRL + L + K+L+ LI+DEAD ++D+GF+ ++ I++ LPK+R+T L
Sbjct: 134 SVVIGTPGRLNEMLSHISS---KHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTGL 190
Query: 580 FSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEA---TVAGLEQGYVVCPSEXXXXXXXXX 636
FS V + V T ++ T + L +V P
Sbjct: 191 FSATMNDTVSSFLKIAGLRNSVRVSVTVTSKKIDTRTPSSLAIQSLVIPPIYKVQCMIHL 250
Query: 637 XXXXXXXXVMVFFSSCMSVKFHHELLNYIDLP--VMCIHGKQKQMKRTTTFFQF--CNAE 692
+VFFSSC SV++ + L LP ++ +HG+Q Q R+ F +F N +
Sbjct: 251 LCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNFEKFKKSNKK 310
Query: 693 TGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP-EE 751
T +L TD+A+RGLDIP VD+++Q DPP DPK + HR GR R G +G A+++L E
Sbjct: 311 T-VLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRA-GRAGVAIVLLNDGRE 368
Query: 752 LGFLRYLKQAKIPLNEFE-----FSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRA 806
+ L+ K+P+ + S++ + +L K++SK+ L G AF ++VRA
Sbjct: 369 EEYEELLRVRKVPITRIDTPIEALDLSRLKVLTHELRKIVSKDRDLYDKGLRAFVSHVRA 428
Query: 807 YDSHHLKQIFDIDTMDLGK 825
Y HH IF I +DLG+
Sbjct: 429 YTKHHASFIFRIKDLDLGQ 447
>UNIPROTKB|F1N5H8 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:DAAA02032283
IPI:IPI00837660 UniGene:Bt.35580 ProteinModelPortal:F1N5H8
PRIDE:F1N5H8 Ensembl:ENSBTAT00000042916 Uniprot:F1N5H8
Length = 736
Score = 373 (136.4 bits), Expect = 7.6e-58, Sum P(4) = 7.6e-58
Identities = 84/231 (36%), Positives = 140/231 (60%)
Query: 390 ILSSTQFEALK-GKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL 448
+ +S F+AL +T+ + M + MT +Q ++IP LLEGRD + ++TGSGKTL
Sbjct: 128 VFTSDAFQALDLHPHLISTINTVLKM--SSMTSVQKQSIPVLLEGRDALVRSQTGSGKTL 185
Query: 449 AFLVPAVELIYNLKFMPRNGTG--IIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGG 505
A+ +P V+ + ++ + G G +I+ PTREL++Q+F +++L+K + G++MGG
Sbjct: 186 AYCIPVVQSLQAMQSKIQRGDGPYALILVPTRELALQSFDTVQKLLKPFTWIVPGVLMGG 245
Query: 506 ASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMK 565
R++E +L KGINI+++TPGRL+DH+++T ++ ++ LI+DEADRILD+GFE+D+
Sbjct: 246 EKRKSEKARLRKGINILISTPGRLVDHIKSTKNIHFRQIRWLILDEADRILDLGFEKDLT 305
Query: 566 QIVNLLP---KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEAT 613
I+N + + RQ +L S PV I V D + +
Sbjct: 306 VILNAVNAECQERQNVLLSATLTEGVARLADISLHD-PVSISVLDESHDVS 355
Score = 255 (94.8 bits), Expect = 7.6e-58, Sum P(4) = 7.6e-58
Identities = 50/101 (49%), Positives = 67/101 (66%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
L + +H +Q +RT F F +++TGIL CTD+AARGLD+P V WIVQY+ P P EY
Sbjct: 455 LKFLRLHSALEQEERTAVFQDFTHSKTGILFCTDIAARGLDLPQVTWIVQYNAPSSPAEY 514
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNE 767
IHR+GRTAR G G +LL+L P E ++ L KI ++E
Sbjct: 515 IHRIGRTAR-IGCHGSSLLVLAPSEAEYVNSLASHKINVSE 554
Score = 69 (29.3 bits), Expect = 7.6e-58, Sum P(4) = 7.6e-58
Identities = 22/60 (36%), Positives = 27/60 (45%)
Query: 606 DDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXX----XXXXVMVFFSSCMSVKFHHEL 661
D+ A AGLEQ VV PS+ V+VFFSSC V+FH+ L
Sbjct: 372 DELDGFAIPAGLEQHVVVVPSKLRLVCLAAFILQKCKFERDQKVIVFFSSCELVEFHYTL 431
Score = 58 (25.5 bits), Expect = 7.6e-58, Sum P(4) = 7.6e-58
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 794 MSG-KEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
+SG K+A ++++RAY ++ LK IF I + LG +K
Sbjct: 610 VSGAKKALQSFIRAYATYPRELKHIFHIRLLHLGHMAK 647
Score = 42 (19.8 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 208 DDTKEEATVAGLEQGYVVCPSE 229
D+ A AGLEQ VV PS+
Sbjct: 372 DELDGFAIPAGLEQHVVVVPSK 393
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 133/365 (36%), Positives = 203/365 (55%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ T KA+A+ F T++Q +I P L+G+D++G+A TGSGKTLAFL+P +E ++ K+
Sbjct: 81 KKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWS 140
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+G G IIISPTREL+ Q F LK++ K+H + GLI+GG + + E ++ + NI++
Sbjct: 141 RTDGVGAIIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILIC 199
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL H+ P F ++ L++DEADR LD+GF++ + I+ P RQT+LFS
Sbjct: 200 TPGRLLQHMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQ 259
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDT--KEEATVAG--------------LEQGYVVCPSEX 628
PVY+G +EE + + L+Q YVV E
Sbjct: 260 TNTVQDLARLNLKD-PVYVGYGGATPREEPSASTKKTPNTAVLAVPELLQQSYVVLNLED 318
Query: 629 XXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFF 686
++VF +SC K+ +E+ + P++ ++G Q +R +
Sbjct: 319 KITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYGTLHQDRRIAIYE 378
Query: 687 QFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI 746
F ++ TDVA+RGLD PAV+W+VQ D P+D +YIHR GR+AR + + G LL+
Sbjct: 379 DFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSARNK-TRGECLLV 437
Query: 747 LRPEE 751
L P E
Sbjct: 438 LTPSE 442
Score = 266 (98.7 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 63/211 (29%), Positives = 111/211 (52%)
Query: 617 LEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHG 674
L+Q YVV E ++VF +SC K+ +E+ + P++ ++G
Sbjct: 307 LQQSYVVLNLEDKITMLWSFIKNHLKQKIIVFVASCKQAKYLYEIFCKLRPGSPLLALYG 366
Query: 675 KQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTA 734
Q +R + F ++ TDVA+RGLD PAV+W+VQ D P+D +YIHR GR+A
Sbjct: 367 TLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDVSQYIHRAGRSA 426
Query: 735 RGEGSSGHALLILRP-EELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFL 792
R + + G LL+L P EE + LK Q I + + K+ ++++E +++ L
Sbjct: 427 RNK-TRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLAQFPEL 485
Query: 793 NMSGKEAFKAYVRAYDSHHLKQIFDIDTMDL 823
+ + AF +Y+++ K++F++ ++DL
Sbjct: 486 RATAQRAFLSYIKSVFLMRNKRLFNVFSLDL 516
>RGD|1304895 [details] [associations]
symbol:Ddx31 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 31"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304895
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000075041
EMBL:CH474001 UniGene:Rn.63648 Ensembl:ENSRNOT00000064323
Uniprot:G3V9V8
Length = 682
Score = 367 (134.2 bits), Expect = 9.2e-58, Sum P(4) = 9.2e-58
Identities = 74/182 (40%), Positives = 125/182 (68%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL--KF 463
+T+ + M + MT +Q ++IP LLEGRD + ++TGSGKTLA+ +P V+ + L K
Sbjct: 116 STINTVLKM--SSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQALTSKI 173
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINII 522
+G +++ PTREL++Q+F +++L+K + G++MGG R++E +L KGINI+
Sbjct: 174 QRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINIL 233
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP---KRRQTML 579
++TPGRL+DH+++T + ++ L++DEADRILD+GFE+D+ I+N + ++RQ +L
Sbjct: 234 ISTPGRLVDHIKSTKNIHFNRVRWLVVDEADRILDLGFEKDVTVILNAVNAECQKRQNVL 293
Query: 580 FS 581
S
Sbjct: 294 LS 295
Score = 270 (100.1 bits), Expect = 9.2e-58, Sum P(4) = 9.2e-58
Identities = 53/103 (51%), Positives = 70/103 (67%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
L + +HG KQ +RT+ F +F ++ TG+LLCTDVA+RGLD+P V WIVQY P P EY
Sbjct: 417 LKFLRLHGNMKQEERTSVFHEFSHSGTGVLLCTDVASRGLDLPQVTWIVQYSAPSAPAEY 476
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFE 769
IHR+GRTAR G G +LLIL P E ++ L KI ++E +
Sbjct: 477 IHRIGRTAR-IGCHGSSLLILAPSEAEYVNSLASHKINVSEIK 518
Score = 58 (25.5 bits), Expect = 9.2e-58, Sum P(4) = 9.2e-58
Identities = 14/53 (26%), Positives = 29/53 (54%)
Query: 778 IQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
+Q E + + + K+A ++++RAY ++ LK IF + ++ LG +K
Sbjct: 557 LQTVFEDYVHSSQRMVSWAKKALQSFIRAYATYPKELKSIFHVRSLHLGHVAK 609
Score = 56 (24.8 bits), Expect = 9.2e-58, Sum P(4) = 9.2e-58
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 645 VMVFFSSCMSVKFHHEL 661
++VFFSSC V+FH+ L
Sbjct: 377 MIVFFSSCELVEFHYNL 393
>UNIPROTKB|F1NM06 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:AADN02026504
EMBL:AADN02026505 EMBL:AADN02026506 EMBL:AADN02026507
EMBL:AADN02026508 EMBL:AADN02026509 EMBL:AADN02026510
IPI:IPI00573288 ProteinModelPortal:F1NM06
Ensembl:ENSGALT00000005588 Uniprot:F1NM06
Length = 690
Score = 369 (135.0 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 73/162 (45%), Positives = 115/162 (70%)
Query: 419 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL--KFMPRNGTGIIIISP 476
MT +Q +TIP LL+G+D + ++TGSGKTLA+ +P V+ + + K +G +++ P
Sbjct: 120 MTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGIPLVQSLQGMQSKIQRSDGPYALVLVP 179
Query: 477 TRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQN 535
TREL++QTF +++L+K + G++MGG R++E +L KGINI+++TPGRL+DH+++
Sbjct: 180 TRELALQTFDTIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILISTPGRLVDHIKS 239
Query: 536 TPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
T ++ Q LIIDEADRILD+GFE+D+ I+N L R+T
Sbjct: 240 TECIHFRRTQWLIIDEADRILDLGFEKDVTVILNALNAERET 281
Score = 274 (101.5 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 58/130 (44%), Positives = 82/130 (63%)
Query: 665 IDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPK 724
+ L + +HG +Q +RT F +F ++TGILLCTDVAARGLD+P V WIVQY+ P P
Sbjct: 417 VQLQFLRLHGNMEQEERTEVFQEFLKSKTGILLCTDVAARGLDLPQVTWIVQYNAPASPA 476
Query: 725 EYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSW---SKISDIQLQ 781
EYIHR+GRTAR G G++LL+L P E ++ L KI ++E + S + D + +
Sbjct: 477 EYIHRIGRTAR-IGCHGNSLLVLAPSEAEYVSLLASHKINVSEIKMEKVLSSLMKDDRFR 535
Query: 782 LEKLISKNYF 791
L + SK +
Sbjct: 536 LRRPGSKKSY 545
Score = 66 (28.3 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 645 VMVFFSSCMSVKFHHELL 662
+++FFSSC V+FH+ELL
Sbjct: 379 MIIFFSSCEQVEFHYELL 396
>UNIPROTKB|F1S0U0 [details] [associations]
symbol:DDX31 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000075041 OMA:ARIGCHG EMBL:CU326339
Ensembl:ENSSSCT00000006300 Uniprot:F1S0U0
Length = 784
Score = 358 (131.1 bits), Expect = 7.9e-56, Sum P(4) = 7.9e-56
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 389 SILSSTQFEALK-GKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS-GK 446
S+ +S F+AL +T+ + M + +T IQ ++IP LLEGRD + ++TGS GK
Sbjct: 181 SVFTSDAFQALDLHPHLISTINTVLKM--SSLTSIQKQSIPVLLEGRDALVRSQTGSEGK 238
Query: 447 TLAFLVPAVELIYNLKFMPRNGTG--IIIISPTRELSMQTFGVLKELMK-YHHHTYGLIM 503
TLA+ +P V+ + +K + G G +I+ PTREL++Q+F +++L+K + G++M
Sbjct: 239 TLAYCIPMVQSLQAVKPKIQRGDGPYALILVPTRELALQSFDTVQKLLKPFTWIVPGVLM 298
Query: 504 GGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED 563
GG R++E +L KGINI+++TPGRL+DH+++T + ++ LI+DEADR+LD+GFE+D
Sbjct: 299 GGEKRKSEKARLRKGINILISTPGRLVDHIKSTKNMRFCRIRWLILDEADRLLDLGFEKD 358
Query: 564 MKQIVNLL----PKRRQTML 579
+ I+N + P+R+ +L
Sbjct: 359 IALILNAVNAERPERQNVLL 378
Score = 263 (97.6 bits), Expect = 7.9e-56, Sum P(4) = 7.9e-56
Identities = 51/103 (49%), Positives = 68/103 (66%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
L + +HG +Q +RT F +F ++ G+LLCTDVAARGLD+P V WIVQY P P EY
Sbjct: 510 LTFLRLHGDMEQEERTAVFQEFSRSKAGVLLCTDVAARGLDLPQVTWIVQYTAPSSPAEY 569
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFE 769
+HR+GRTAR G G +LLIL P E ++ L KI ++E +
Sbjct: 570 VHRIGRTAR-IGFQGSSLLILAPSEAEYVNSLASHKIKVSEMK 611
Score = 62 (26.9 bits), Expect = 7.9e-56, Sum P(4) = 7.9e-56
Identities = 11/17 (64%), Positives = 14/17 (82%)
Query: 645 VMVFFSSCMSVKFHHEL 661
++VFFSSC V+FHH L
Sbjct: 470 MIVFFSSCELVEFHHSL 486
Score = 58 (25.5 bits), Expect = 7.9e-56, Sum P(4) = 7.9e-56
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 797 KEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
K+A +++VRAY ++ LK IF + ++ LG +K
Sbjct: 669 KKALQSFVRAYATYPRELKHIFHVRSLHLGHVAK 702
>ZFIN|ZDB-GENE-030131-3973 [details] [associations]
symbol:ddx31 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 31" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-3973 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
KO:K14806 HOGENOM:HOG000268799 GeneTree:ENSGT00550000075041
CTD:64794 HOVERGEN:HBG103793 OrthoDB:EOG42V8FK EMBL:BX276128
IPI:IPI00614096 RefSeq:XP_683832.1 UniGene:Dr.79241
Ensembl:ENSDART00000148314 GeneID:325248 KEGG:dre:325248
InParanoid:A2BFD2 NextBio:20809193 Uniprot:A2BFD2
Length = 739
Score = 373 (136.4 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 94/285 (32%), Positives = 154/285 (54%)
Query: 338 APAKHHVMPDFSTTPLETKDQLNEWLVFKDLTPPLISVGTVISADVSLSIPSILSSTQFE 397
+P+K P P E +D ++ L + V+S V+ + +S FE
Sbjct: 100 SPSKVKTFP--KKAPTEHEDHGRPFIKTSSLFRNNPEIPDVLSPAVNQVKEKVFTSNTFE 157
Query: 398 ALK-GKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 456
L TL + ++ + MT +Q +TIP L+ G+D V ++TGSGKTLA+ +P V+
Sbjct: 158 ELNLHPHLVATLHKVLNV--SSMTSVQKQTIPVLMSGKDAVVRSQTGSGKTLAYGIPMVQ 215
Query: 457 LIYNL--KFMPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQ 513
+ + K +G ++I PTREL++Q+F + ++L++ + G++MGG ++AE
Sbjct: 216 FLQAIQPKVKRSDGPLAVVIVPTRELALQSFQMFQKLLRPFTWIVPGVLMGGEKKKAEKA 275
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
+L KGIN++++TPGRL+DH++NT + ++ LI+DEADRILD+GFE+D+ I+N L
Sbjct: 276 RLRKGINVLISTPGRLVDHIKNTLSIAFSAVRWLILDEADRILDLGFEKDLTVILNALNA 335
Query: 574 R---RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVA 615
RQ +L S PV + V + EE A
Sbjct: 336 AGPDRQNVLLSATITEGLSRLASISMKD-PVSVHVSEGSEETVEA 379
Score = 278 (102.9 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 68/175 (38%), Positives = 97/175 (55%)
Query: 645 VMVFFSSCMSVKFHHELLNYI--DLP-------VMCI-----HGKQKQMKRTTTFFQFCN 690
+++F SSC +V+F L + ++P C+ HG +Q +RT F +F
Sbjct: 430 LIIFISSCEAVEFLLNLFTAVLCEIPSNTSSKSTSCLNFYRLHGNMRQEERTEVFQEFSQ 489
Query: 691 AETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 750
+TGILLCTDVAARGLD+P V WIVQY+PP EY+HRVGRTAR G+ G +LL L P
Sbjct: 490 CKTGILLCTDVAARGLDLPQVTWIVQYNPPVSAAEYVHRVGRTAR-IGAQGSSLLFLTPS 548
Query: 751 ELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVR 805
E F+ L I L+E + I ++ E+ + + + +AF+ VR
Sbjct: 549 ETAFVDVLANHNISLSEMKMV--DILSTLMKDERFKGRGKWDSKRSADAFEQEVR 601
Score = 56 (24.8 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 778 IQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
+Q E + + + K A + ++RAY ++ LK IF I + LG +K
Sbjct: 607 LQTDFENYVHASNESLQTAKSALQCFLRAYTTYPSSLKHIFHIRMLHLGHAAK 659
>UNIPROTKB|F8WAJ0 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AL160165 HGNC:HGNC:16715
IPI:IPI01010837 ProteinModelPortal:F8WAJ0 SMR:F8WAJ0
Ensembl:ENST00000438527 ArrayExpress:F8WAJ0 Bgee:F8WAJ0
Uniprot:F8WAJ0
Length = 722
Score = 367 (134.2 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 82/226 (36%), Positives = 134/226 (59%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL--KF 463
+T+ + M + MT +Q ++IP LLEGRD + ++TGSGKTLA+ +P V+ + + K
Sbjct: 114 STINTVLKM--SSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKI 171
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINII 522
+G +++ PTREL++Q+F +++L+K + G++MGG R++E +L KGINI+
Sbjct: 172 QRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINIL 231
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP---KRRQTML 579
++TPGRL+DH+++T + L+ L+ DEADRILD+GFE+D+ I+N + ++RQ +L
Sbjct: 232 ISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVL 291
Query: 580 FSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCP 625
S PV I V D + + VCP
Sbjct: 292 LSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCP 336
Score = 263 (97.6 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 52/103 (50%), Positives = 69/103 (66%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
L + +HG +Q +RT F +F ++ G+LLCTDVAARGLD+P V WIVQY+ P P EY
Sbjct: 424 LKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEY 483
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFE 769
IHR+GRTAR G G +LLIL P E ++ L KI ++E +
Sbjct: 484 IHRIGRTAR-IGCHGSSLLILAPSEAEYVNSLASHKINVSEIK 525
Score = 56 (24.8 bits), Expect = 1.1e-54, Sum P(3) = 1.1e-54
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 645 VMVFFSSCMSVKFHHEL 661
++VFFSSC V+FH+ L
Sbjct: 384 MVVFFSSCELVEFHYSL 400
Score = 40 (19.1 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIV 568
A P L H+ P L L CL A + FEED K +V
Sbjct: 347 AIPESLKQHVTVVPSKL--RLVCLA---AFILQKCKFEEDQKMVV 386
>TAIR|locus:2064844 [details] [associations]
symbol:AT2G40700 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006406 "mRNA export from
nucleus" evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0006626 "protein targeting to mitochondrion"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0042991 "transcription factor
import into nucleus" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HOGENOM:HOG000268799
EMBL:AJ010468 IPI:IPI00518934 PIR:G84832 PIR:T51746
RefSeq:NP_181602.1 UniGene:At.47 ProteinModelPortal:Q7XJN0
SMR:Q7XJN0 STRING:Q7XJN0 PaxDb:Q7XJN0 PRIDE:Q7XJN0
EnsemblPlants:AT2G40700.1 GeneID:818665 KEGG:ath:AT2G40700
GeneFarm:934 TAIR:At2g40700 InParanoid:Q7XJN0 OMA:HRFHWIV
PhylomeDB:Q7XJN0 ProtClustDB:CLSN2683635 Genevestigator:Q7XJN0
GermOnline:AT2G40700 Uniprot:Q7XJN0
Length = 609
Score = 370 (135.3 bits), Expect = 1.9e-54, Sum P(4) = 1.9e-54
Identities = 78/193 (40%), Positives = 127/193 (65%)
Query: 382 DVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAK 441
D S + + +S F +L G + + + MGF T +QA+ IP +L GRD++ +A
Sbjct: 17 DASKAKSGLFASCSFSSL-GLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAP 75
Query: 442 TGSGKTLAFLVPAVELI--YNLKFMPRNGTGIIIISPTRELSMQTFGVLKELM-KYHHHT 498
TG+GKT+A+L P + + ++ K +GT ++I PTREL +Q + L++L+ ++H
Sbjct: 76 TGTGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIV 135
Query: 499 YGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDI 558
G +MGG + E +L KGI+I++ATPGRLLDHL+NT F++KNL+ +I DEAD IL++
Sbjct: 136 PGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILEL 195
Query: 559 GFEEDMKQIVNLL 571
G+ ++++QI+ LL
Sbjct: 196 GYGKEIEQIIKLL 208
Score = 269 (99.8 bits), Expect = 6.8e-42, Sum P(4) = 6.8e-42
Identities = 62/160 (38%), Positives = 96/160 (60%)
Query: 467 NGTGIIIISPTRELSMQTFGVLKELM-KYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
+GT ++I PTREL +Q + L++L+ ++H G +MGG + E +L KGI+I++AT
Sbjct: 103 HGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEKARLRKGISILIAT 162
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL-------------- 571
PGRLLDHL+NT F++KNL+ +I DEAD IL++G+ ++++QI+ LL
Sbjct: 163 PGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIV 222
Query: 572 PK--RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTK 609
PK ++Q +L S PV IG+D+TK
Sbjct: 223 PKGIQKQNLLLSATLNDKVNDLAKLSLDD-PVMIGLDNTK 261
Score = 223 (83.6 bits), Expect = 1.9e-54, Sum P(4) = 1.9e-54
Identities = 47/97 (48%), Positives = 61/97 (62%)
Query: 672 IHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 731
+HG +Q R + F F + +LL TDVAARGLD P V I+QYD P + EY+HRVG
Sbjct: 379 LHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVG 438
Query: 732 RTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEF 768
RTAR G G ALL L+P E+ +L+ LK+ L E+
Sbjct: 439 RTAR-IGEKGEALLFLQPIEIDYLKELKKHGASLTEY 474
Score = 65 (27.9 bits), Expect = 1.9e-54, Sum P(4) = 1.9e-54
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 775 ISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
+ +Q LE L + K AF ++VR Y +H LK IF + + LG +K
Sbjct: 504 VISLQRALESLTYAEPKMKSLAKNAFVSWVRGYAAHKGELKSIFVVKKLHLGHVAK 559
Score = 52 (23.4 bits), Expect = 1.9e-54, Sum P(4) = 1.9e-54
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 645 VMVFFSSCMSVKFHHELLNYIDLP 668
V+VFFS+ +V FH+ LL+ P
Sbjct: 334 VVVFFSTRDAVDFHYSLLSEFQWP 357
Score = 38 (18.4 bits), Expect = 1.2e-17, Sum P(4) = 1.2e-17
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 202 PVYIGVDDTK 211
PV IG+D+TK
Sbjct: 252 PVMIGLDNTK 261
>DICTYBASE|DDB_G0291588 [details] [associations]
symbol:ddx55 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0291588 GO:GO:0005524
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14809
OMA:HEKKVET RefSeq:XP_635318.1 ProteinModelPortal:Q54EC2
STRING:Q54EC2 EnsemblProtists:DDB0234215 GeneID:8628262
KEGG:ddi:DDB_G0291588 ProtClustDB:CLSZ2429585 Uniprot:Q54EC2
Length = 663
Score = 451 (163.8 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 108/339 (31%), Positives = 174/339 (51%)
Query: 501 LIMGGASRQAEAQKLAK-GINIIVATPGRLLDHL----QNTPEFLYKNLQCLIIDEADRI 555
L++GG + G NI++ TPGR + L +N +F +K + LI+DEADR+
Sbjct: 160 LLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKFKEFEMLILDEADRL 219
Query: 556 LDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVD----DTKEE 611
LD+GF + I+ LPK+R+T LFS P + V +T E+
Sbjct: 220 LDMGFHLPINSILLKLPKQRRTGLFSATQTSEVKELARTGMRN-PFKVSVSVKHIETHED 278
Query: 612 ATV-AGLEQGYVVCP-SEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDL-- 667
++ L+ Y++ P E ++++F +C +V + ++L + +
Sbjct: 279 QSIPTTLDNRYMIVPVEERLNQLVHFLLNHIDKNKIIIYFLTCSTVDYFFKILQSVKVLS 338
Query: 668 --PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKE 725
P +HGK +R F F A G LL TD+AARGLDIP VDW++QYD P DPK
Sbjct: 339 GKPFFSLHGKAPHSQRIKVFDSFSQATNGCLLSTDLAARGLDIPNVDWVLQYDSPQDPKA 398
Query: 726 YIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKL 785
++HR+GRTAR G G+AL+ L PEE ++ +LK K+PL E + ++++ +++K+
Sbjct: 399 FVHRIGRTAR-MGRDGNALIFLSPEEDSYIEFLKIKKVPLVEMVKA-ENVTNVLPEIKKI 456
Query: 786 ISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMDLG 824
+ + G A ++VR Y H IF +++G
Sbjct: 457 SFNDREIMEKGVIAMVSHVRGYKEHLCPYIFVFHRLNIG 495
Score = 173 (66.0 bits), Expect = 2.4e-54, Sum P(2) = 2.4e-54
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 399 LKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 458
L+ K+ ++TL I +GF M+ +Q+ IP + +D++ A TGSGKTLAF++P +E I
Sbjct: 13 LENKLSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIEKI 72
Query: 459 YNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELM 492
+ + + IIISPTREL++Q VL E +
Sbjct: 73 LKRETNLKKTDIASIIISPTRELAIQIQQVLLEFL 107
>UNIPROTKB|Q9H8H2 [details] [associations]
symbol:DDX31 "Probable ATP-dependent RNA helicase DDX31"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL354735 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
EMBL:AF427339 EMBL:AF335567 EMBL:AF335568 EMBL:AF335569
EMBL:AK023695 EMBL:AK027002 EMBL:AK027484 EMBL:AL160165
EMBL:BC012726 IPI:IPI00043990 IPI:IPI00291296 IPI:IPI00552374
IPI:IPI00552716 RefSeq:NP_073616.6 RefSeq:NP_619526.1
UniGene:Hs.660767 ProteinModelPortal:Q9H8H2 SMR:Q9H8H2
IntAct:Q9H8H2 PhosphoSite:Q9H8H2 DMDM:71153334 SWISS-2DPAGE:Q9H8H2
PaxDb:Q9H8H2 PRIDE:Q9H8H2 DNASU:64794 Ensembl:ENST00000310532
Ensembl:ENST00000372153 Ensembl:ENST00000372155
Ensembl:ENST00000372159 GeneID:64794 KEGG:hsa:64794 UCSC:uc004cbq.1
UCSC:uc004cbs.2 UCSC:uc010mzu.1 CTD:64794 GeneCards:GC09M135468
HGNC:HGNC:16715 HPA:HPA020891 neXtProt:NX_Q9H8H2 PharmGKB:PA27218
HOVERGEN:HBG103793 InParanoid:Q9H8H2 OMA:ARIGCHG OrthoDB:EOG42V8FK
PhylomeDB:Q9H8H2 GenomeRNAi:64794 NextBio:66862 ArrayExpress:Q9H8H2
Bgee:Q9H8H2 CleanEx:HS_DDX31 Genevestigator:Q9H8H2
GermOnline:ENSG00000125485 Uniprot:Q9H8H2
Length = 851
Score = 367 (134.2 bits), Expect = 4.3e-54, Sum P(3) = 4.3e-54
Identities = 82/226 (36%), Positives = 134/226 (59%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL--KF 463
+T+ + M + MT +Q ++IP LLEGRD + ++TGSGKTLA+ +P V+ + + K
Sbjct: 243 STINTVLKM--SSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKI 300
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINII 522
+G +++ PTREL++Q+F +++L+K + G++MGG R++E +L KGINI+
Sbjct: 301 QRSDGPYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINIL 360
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP---KRRQTML 579
++TPGRL+DH+++T + L+ L+ DEADRILD+GFE+D+ I+N + ++RQ +L
Sbjct: 361 ISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILNAVNAECQKRQNVL 420
Query: 580 FSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCP 625
S PV I V D + + VCP
Sbjct: 421 LSATLTEGVTRLADISLHD-PVSISVLDKSHDQLNPKDKAVQEVCP 465
Score = 263 (97.6 bits), Expect = 4.3e-54, Sum P(3) = 4.3e-54
Identities = 52/103 (50%), Positives = 69/103 (66%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEY 726
L + +HG +Q +RT F +F ++ G+LLCTDVAARGLD+P V WIVQY+ P P EY
Sbjct: 553 LKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEY 612
Query: 727 IHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFE 769
IHR+GRTAR G G +LLIL P E ++ L KI ++E +
Sbjct: 613 IHRIGRTAR-IGCHGSSLLILAPSEAEYVNSLASHKINVSEIK 654
Score = 56 (24.8 bits), Expect = 4.3e-54, Sum P(3) = 4.3e-54
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 645 VMVFFSSCMSVKFHHEL 661
++VFFSSC V+FH+ L
Sbjct: 513 MVVFFSSCELVEFHYSL 529
Score = 40 (19.1 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIV 568
A P L H+ P L L CL A + FEED K +V
Sbjct: 476 AIPESLKQHVTVVPSKL--RLVCLA---AFILQKCKFEEDQKMVV 515
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/353 (35%), Positives = 204/353 (57%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F+ L+ + LK IA++ FTK T IQ+ +IP L G+D+V A+TGSGKT A+++P
Sbjct: 130 TSFQTLQ--LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIP 187
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHH-TYGLIMGGASRQAEA 512
+E L + P T +II++PTREL++Q + K+L + ++ GL +GG + + +
Sbjct: 188 IIE---RLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQE 244
Query: 513 QKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP 572
++L +I++ATPGRL+DH++N+P F +++Q L+IDEADR+L+ GF++++ +I++L+P
Sbjct: 245 EQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIP 304
Query: 573 K-RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
K +RQT+LFS PV I +D K A+ L+Q + +
Sbjct: 305 KHKRQTLLFSATMNTRIQDLIQLSLQK-PVRIMIDPPKSVASKL-LQQFVRIRKRDQLKP 362
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
V+VF + + +L + L V +HG Q +R F +
Sbjct: 363 ALLYQLLKGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSL 422
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
E +L+CTD+AARGLDIP ++ ++ YD P + Y+HRVGRTAR G G ++
Sbjct: 423 EVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARA-GRDGTSI 474
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 126/353 (35%), Positives = 204/353 (57%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F+ L+ + LK IA++ FTK T IQ+ +IP L G+D+V A+TGSGKT A+++P
Sbjct: 130 TSFQTLQ--LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIP 187
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHH-TYGLIMGGASRQAEA 512
+E L + P T +II++PTREL++Q + K+L + ++ GL +GG + + +
Sbjct: 188 IIE---RLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQE 244
Query: 513 QKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP 572
++L +I++ATPGRL+DH++N+P F +++Q L+IDEADR+L+ GF++++ +I++L+P
Sbjct: 245 EQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIP 304
Query: 573 K-RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
K +RQT+LFS PV I +D K A+ L+Q + +
Sbjct: 305 KHKRQTLLFSATMNTRIQDLIQLSLQK-PVRIMIDPPKSVASKL-LQQFVRIRKRDQLKP 362
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
V+VF + + +L + L V +HG Q +R F +
Sbjct: 363 ALLYQLLKGVSSRVVVFVARKETAHRLRIVLGLLGLKVSELHGALTQEQRLQNVKNFKSL 422
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
E +L+CTD+AARGLDIP ++ ++ YD P + Y+HRVGRTAR G G ++
Sbjct: 423 EVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARA-GRDGTSI 474
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 143/460 (31%), Positives = 236/460 (51%)
Query: 367 DLTPPLI---SVGTVISADVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQ 423
D+ PLI + T + ++ + S LS T+F+ + TLK I D GF MT +Q
Sbjct: 50 DVDEPLIKKPASTTPLVTQIAKTSDSYLSKTRFDQFP--LSPLTLKGIEDAGFKTMTVVQ 107
Query: 424 ARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTG----IIIISPTRE 479
T+P +L+G+D++ AKTG+GKT+AFL+P++E + R+ ++++ PTRE
Sbjct: 108 EATLPLILQGKDILAKAKTGTGKTVAFLLPSIEAVIKAPPASRDNRHPPIIVLVVCPTRE 167
Query: 480 LSMQTFGVLKELMKYHHHT-YGLIMGGASRQAEAQKLAKG-INIIVATPGRLLDHLQNTP 537
L+ Q L+KYH +++GG E ++L K I+VATPGRL DH+ NT
Sbjct: 168 LACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTS 227
Query: 538 EFLYK--NLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXX 595
F + ++ L++DEAD +LD+GF ++++I+ +PK+RQT LFS
Sbjct: 228 GFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVPKQRQTFLFSATVSDEVRQICHVA 287
Query: 596 XXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV----MVFFSS 651
++ T + Q Y++ + V ++F ++
Sbjct: 288 LKRDHEFVNCVQEGAGETHQKVSQMYMIASLDRHFSLLYGLLKKHITDNVGYKVIIFCTT 347
Query: 652 CMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAV 711
M + +LL + L V IH ++ Q RT +F +++ IL+ +DV+ARG+D P V
Sbjct: 348 AMVTRLVADLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDV 407
Query: 712 DWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFS 771
+VQ P D ++YIHR+GRT R +G G +L+L P E FL +K +P+ +
Sbjct: 408 SLVVQMGLPSDREQYIHRLGRTGR-KGKEGEGVLLLAPWEEYFLSSVKD--LPITK---- 460
Query: 772 WSKISDIQLQLEKLISKNYF-LNMSGKEA-FKAYVRAYDS 809
S + I + K + K + M+ KEA ++A++ Y S
Sbjct: 461 -SSLPPIDHEAVKKVQKGLIQVEMTNKEAAYQAWLGYYKS 499
>WB|WBGene00013983 [details] [associations]
symbol:ZK512.2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0017038 "protein import" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:Z22177 eggNOG:COG0513 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809 PIR:B88549 PIR:S40763
RefSeq:NP_001254980.1 ProteinModelPortal:P34640 SMR:P34640
STRING:P34640 PaxDb:P34640 EnsemblMetazoa:ZK512.2a.1
EnsemblMetazoa:ZK512.2a.2 GeneID:176292 KEGG:cel:CELE_ZK512.2
UCSC:ZK512.2 CTD:176292 WormBase:ZK512.2
GeneTree:ENSGT00550000074969 InParanoid:P34640 OMA:HEKKVET
NextBio:891956 Uniprot:P34640
Length = 578
Score = 537 (194.1 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 127/427 (29%), Positives = 220/427 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L + D + T++Q + LL D+V + TGSGKTLAF++P + +I N K P +
Sbjct: 21 LLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQPAD 80
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLA-KGINIIVATP 526
G +I+SP+REL Q V++ + + T + GG + K +NI+VATP
Sbjct: 81 -IGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIKMFKNKNVNILVATP 139
Query: 527 GRLLDHLQNTPEFL---YKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
GRL +Q+ + + LQ L+IDEADR +I FE+ M++I++ +PK+R+T LFS
Sbjct: 140 GRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
+ V + A + L+ YV C ++
Sbjct: 200 QVKEEDDLMVFGLRNAK-QVKVAQERNSAAPSTLKNYYVECRADEKTSVCLEFIRQRTDK 258
Query: 644 XVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
+++FF SC SV++ +++ P+ +HGK R + F ++ G+++ TDV
Sbjct: 259 KILIFFPSCNSVRYFYKIFERCLGKRPLFAVHGKCSNPHRASQIKAFSDSTNGVMISTDV 318
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQ 760
ARG+DI +DW++Q+D P ++HR GRTAR G G+AL+++ E+L ++ +L
Sbjct: 319 MARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARC-GREGNALILIASEQLAYVNFLDNH 377
Query: 761 AKIPLNEFEFSWS---KISDIQLQLEKL-ISKNYFLNMSGKEAFKAYVRAYDSHHLKQIF 816
K+ L+E + + K +++ ++ K+ +S L +G AF ++V +Y H I
Sbjct: 378 EKVKLDEIKVPTNNSRKSEELRQKMIKIQVSDRAILE-AGTRAFVSHVESYAKHDCHLIC 436
Query: 817 DIDTMDL 823
+D +++
Sbjct: 437 SLDDLNV 443
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 547 (197.6 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 155/513 (30%), Positives = 256/513 (49%)
Query: 314 LETKDQLNVRSNYIGLGGVILIENAPAKHHVMPDFSTTPLETKDQLNEWLVFKDLTPPLI 373
LE +D + N +GLG I++ P++ D S + D+ +E L+ K + +
Sbjct: 315 LEEEDSSDDDENRVGLGN---IDDLPSE-----DSS----DEDDENDEPLIKKAASAKAV 362
Query: 374 SVGTVISADVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEG 433
V S S LS T+F+ + +LKAI D GF MT +Q T+P +L+G
Sbjct: 363 QTDKPTGEHVKTS-DSYLSKTRFDQFP--LSPLSLKAIKDAGFETMTVVQEATLPIILQG 419
Query: 434 RDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTG----IIIISPTRELSMQTFGVLK 489
+D++ AKTG+GKT+AFL+PA+E + R+ ++++ PTREL+ Q
Sbjct: 420 KDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEAN 479
Query: 490 ELMKYHHHT-YGLIMGGASRQAEAQKLAKG-INIIVATPGRLLDHLQNTPEFLYK--NLQ 545
L+KYH +++GG E +++ I+VATPGRL DH++NT F + ++
Sbjct: 480 TLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVK 539
Query: 546 CLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGV 605
L++DEAD +LD+GF D+++I+ +PK+RQT LFS +I
Sbjct: 540 VLVLDEADHLLDMGFRRDIERIIAAVPKQRQTFLFSATVPEEVRQICHVALKRDHEFINC 599
Query: 606 DDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV----MVFFSSCMSVKFHHEL 661
T + Q Y++ + V ++F ++ M + +L
Sbjct: 600 VQEGSGETHQKVTQMYMIASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVTRLVADL 659
Query: 662 LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPD 721
L+ + L V IH ++ Q RT +F ++ IL+ +DV+ARG+D P V +VQ P
Sbjct: 660 LSQLSLNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDVSLVVQMGLPS 719
Query: 722 DPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQ 781
D ++YIHR+GRT R +G G +L+L P E F+ +K +P+ + S + I +
Sbjct: 720 DREQYIHRLGRTGR-KGKEGEGVLLLAPWEEYFMSSVKD--LPITK-----SPLPPIDPE 771
Query: 782 LEKLISKNYF-LNMSGKEA-FKAYVRAYDSHHL 812
K + K + M KEA ++A++ Y S +
Sbjct: 772 AVKRVQKGLSQVEMKNKEAAYQAWLGYYKSQKM 804
Score = 42 (19.8 bits), Expect = 1.9e-51, Sum P(2) = 1.9e-51
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 FSTTPLETKDQLNVRSNYIGLGGVILIENAPAKHHVMPDFS 349
F + P+ +K R YIGLG + P + P+F+
Sbjct: 33 FRSVPVLSK-AFPFRLKYIGLGSRVNFSTRPERSQ--PEFA 70
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 514 (186.0 bits), Expect = 3.1e-51, Sum P(2) = 3.1e-51
Identities = 126/360 (35%), Positives = 194/360 (53%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+ K T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 37 EACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 92
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +I++ATPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 152
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 153 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 212
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 213 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIF 269
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 270 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 329
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF---LRYLKQAKIPL 765
P VD +V +D P K+YIHRVGRTAR G SG A+ + ++ + +L K+P+
Sbjct: 330 PHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAITFVTQYDVELFQRIEHLIGKKLPV 388
Score = 42 (19.8 bits), Expect = 3.1e-51, Sum P(2) = 3.1e-51
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 346 PDFSTTPLETKDQLNEWLVFKDL 368
PD T L+T + E FKDL
Sbjct: 7 PDSPTEALQTAAEEEETKTFKDL 29
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 530 (191.6 bits), Expect = 8.2e-51, P = 8.2e-51
Identities = 131/363 (36%), Positives = 199/363 (54%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S+ QF+ L G + LK +A F + TEIQ + IP + GRDL+ S+KTGSGKTLAF+
Sbjct: 3 STLQFKDL-G-LDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFV 60
Query: 452 VPAVELIYNLK-FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
+P + K F ++ G+I++ PTREL+ Q +G L+ ++ +T LI GG +
Sbjct: 61 LPMLHKSLKTKAFSAKDPRGLILV-PTRELAKQVYGELRSMLGGLSYTATLITGGENFND 119
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
+ + LA+G IVATPGRL DHL + FL + L+ L++DEADR+LD+GF +++++I N
Sbjct: 120 QVKALARGPRFIVATPGRLADHLDHRSLFL-EGLETLVLDEADRMLDLGFAKELRRIHNA 178
Query: 571 LP-KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EX 628
+RRQT++FS P I + EE + Q + +C +
Sbjct: 179 AKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHK--DITQHFYLCDHLDH 236
Query: 629 XXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQF 688
V++F ++ E LN +L + + G Q +R T QF
Sbjct: 237 KEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQF 296
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
A IL+ TDVA+RGLDIPAV ++ +D P +EY+HRVGRT R G+ G A+ ++
Sbjct: 297 ERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRA-GNKGDAMSLVG 355
Query: 749 PEE 751
P++
Sbjct: 356 PKD 358
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 530 (191.6 bits), Expect = 8.2e-51, P = 8.2e-51
Identities = 131/363 (36%), Positives = 199/363 (54%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S+ QF+ L G + LK +A F + TEIQ + IP + GRDL+ S+KTGSGKTLAF+
Sbjct: 3 STLQFKDL-G-LDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFV 60
Query: 452 VPAVELIYNLK-FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
+P + K F ++ G+I++ PTREL+ Q +G L+ ++ +T LI GG +
Sbjct: 61 LPMLHKSLKTKAFSAKDPRGLILV-PTRELAKQVYGELRSMLGGLSYTATLITGGENFND 119
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
+ + LA+G IVATPGRL DHL + FL + L+ L++DEADR+LD+GF +++++I N
Sbjct: 120 QVKALARGPRFIVATPGRLADHLDHRSLFL-EGLETLVLDEADRMLDLGFAKELRRIHNA 178
Query: 571 LP-KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EX 628
+RRQT++FS P I + EE + Q + +C +
Sbjct: 179 AKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHK--DITQHFYLCDHLDH 236
Query: 629 XXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQF 688
V++F ++ E LN +L + + G Q +R T QF
Sbjct: 237 KEALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQF 296
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
A IL+ TDVA+RGLDIPAV ++ +D P +EY+HRVGRT R G+ G A+ ++
Sbjct: 297 ERAVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRA-GNKGDAMSLVG 355
Query: 749 PEE 751
P++
Sbjct: 356 PKD 358
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 514 (186.0 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 126/360 (35%), Positives = 194/360 (53%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+ K T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 37 EACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 92
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +I++ATPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 152
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 153 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 212
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 213 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIF 269
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 270 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 329
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF---LRYLKQAKIPL 765
P VD +V +D P K+YIHRVGRTAR G SG A+ + ++ + +L K+P+
Sbjct: 330 PHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAITFVTQYDVELFQRIEHLIGKKLPV 388
Score = 37 (18.1 bits), Expect = 1.0e-50, Sum P(2) = 1.0e-50
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 346 PDFSTTPLETKDQLNEWLVFKDL 368
PD + L+T + E FKDL
Sbjct: 7 PDSPSGALQTAAEEEETKTFKDL 29
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 528 (190.9 bits), Expect = 1.4e-50, P = 1.4e-50
Identities = 136/406 (33%), Positives = 216/406 (53%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F+ L G V E +A +G+ K T+IQ IP L+GRD++G A+TGSGKT AF VP
Sbjct: 79 TSFKEL-G-VTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVP 136
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + L R T ++++PTREL+ Q L +I+GG ++A
Sbjct: 137 VLQSL--LACAQRLHT--LVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQAL 192
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
LAK ++++ATPGRL+DH++NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+
Sbjct: 193 VLAKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPR 252
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
R+T LFS PV V + + ATV L+Q Y+ PS+
Sbjct: 253 DRRTFLFSATMTKKVQKLQRAALQD-PVKCSV--SSKYATVDKLQQFYIFIPSKYKDCYL 309
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
MVF +C + + LL + + + +HG+ Q KR +F +
Sbjct: 310 VSILNELAGNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSR 369
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+LL TDVA+RGLDIP VD ++ +D P K+YIHRVGRTAR G SG ++ + ++
Sbjct: 370 SVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARA-GRSGKSITFVTQYDVE 428
Query: 754 FLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEA 799
+ + +A I F + ++ + +E++ F + KE+
Sbjct: 429 LFQRI-EALIGKKLPAFPTQE-EEVMMLVERVSEAQRFARIEMKES 472
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 524 (189.5 bits), Expect = 4.1e-50, P = 4.1e-50
Identities = 120/334 (35%), Positives = 188/334 (56%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G+ K ++IQ +P L+G+D++G A+TGSGKT AF +P ++ + + P+ ++
Sbjct: 62 LGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLD---HPQ-AFFCLV 117
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L +I+GG A+A LA+ +IIVATPGRL+DHL
Sbjct: 118 LTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHL 177
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXX 593
+NT F K L+ LI+DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 178 ENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKLER 237
Query: 594 XXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCM 653
P + V + TV L+Q Y+ P++ +VF ++C
Sbjct: 238 ASLRD-PARVSVSSRYK--TVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCA 294
Query: 654 SVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDW 713
+ +L + + + +HG+ Q KR + +F + IL+CTDVAARGLDIP VD
Sbjct: 295 TTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDM 354
Query: 714 IVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
++ YD P K+Y+HRVGRTAR G SG A+ ++
Sbjct: 355 VINYDMPSQSKDYVHRVGRTARA-GRSGIAITVV 387
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 521 (188.5 bits), Expect = 9.0e-50, P = 9.0e-50
Identities = 125/336 (37%), Positives = 185/336 (55%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+TK T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 37 EACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 92
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +II+ATPGR
Sbjct: 93 LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGR 152
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 153 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 212
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 213 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYIFIPSKFKDTYLVYILNELAGNSFMIF 269
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 270 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 329
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
P VD +V +D P K+YIHRVGRTAR G SG A+
Sbjct: 330 PHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAI 364
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 520 (188.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 132/393 (33%), Positives = 208/393 (52%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+TK T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 39 EACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 94
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +I++ATPGR
Sbjct: 95 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 154
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 155 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 214
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 215 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIF 271
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 272 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 331
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF---LRYLKQAKIPL 765
P VD +V +D P K+YIHRVGRTAR G SG A+ + ++ + +L K+P+
Sbjct: 332 PHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAITFVTQYDVELFQRIEHLIGKKLPV 390
Query: 766 NEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
F ++ ++ + E++ F M +E
Sbjct: 391 ----FP-TQDDEVMMLTERVTEAQRFARMELRE 418
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 520 (188.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 132/393 (33%), Positives = 208/393 (52%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+TK T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 63 EACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 118
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +I++ATPGR
Sbjct: 119 LFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGR 178
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 179 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 238
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 239 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIF 295
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 296 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 355
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF---LRYLKQAKIPL 765
P VD +V +D P K+YIHRVGRTAR G SG A+ + ++ + +L K+P+
Sbjct: 356 PHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAITFVTQYDVELFQRIEHLIGKKLPV 414
Query: 766 NEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
F ++ ++ + E++ F M +E
Sbjct: 415 ----FP-TQDDEVMMLTERVTEAQRFARMELRE 442
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 532 (192.3 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 133/363 (36%), Positives = 193/363 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI +GF + T IQ IP L G+D+ A TG+GKT AF++P +E LIY + P
Sbjct: 192 LKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLERLIYKPRQAPI 251
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
T ++++ PTREL +Q V K+L ++ T L +GG + + L G +I++ATP
Sbjct: 252 --TRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIATP 309
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ L + RQTMLFS
Sbjct: 310 GRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMTE 369
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXX-- 643
P I V+ + A L Q ++ + P+
Sbjct: 370 EVKDLASVSLKN-PTRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVSALLTRTFPD 426
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVAA
Sbjct: 427 HVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVATDVAA 486
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQAK 762
RGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K AK
Sbjct: 487 RGLDIEGVKTVINFTMPNTTKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKAAK 545
Query: 763 IPL 765
P+
Sbjct: 546 TPV 548
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 518 (187.4 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 124/360 (34%), Positives = 199/360 (55%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+FE+ C L+AI+D G+ KMT IQ + IP + G+D++ SA+TG+GKT AF +P
Sbjct: 2 RFESFS--FCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPI 59
Query: 455 VE-LIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ ++ N ++ T ++I++PTREL+ Q ++ KY + + I GG + +AQ
Sbjct: 60 LQKMVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQ 119
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
KL +G +IIVATPGRLL+HL ++ L++DEADR+LD+GF D+++I+ + K
Sbjct: 120 KLKRGADIIVATPGRLLEHL-TACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNK 178
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
+RQ +LFS P I D K+ T + Q VV P E
Sbjct: 179 KRQNLLFSATFSSAVKKLANEMMIK-PQVISAD--KQNTTADTVSQ--VVYPVEQRRKRE 233
Query: 634 XXXXXXXXXX--XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
V+VF ++ + + LN +P +HG++ Q R +F +
Sbjct: 234 LLSELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSG 293
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
+ +L+ T+VAARGLDIP+++++V +D P ++Y+HR+GRT R G SG A+ + EE
Sbjct: 294 KVRVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRA-GKSGVAISFVSREE 352
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 533 (192.7 bits), Expect = 2.4e-49, P = 2.4e-49
Identities = 128/350 (36%), Positives = 195/350 (55%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
L+ + +GF K T IQ++TIP L G+D+VG A TGSGKT AF+VP +E L+Y K +P
Sbjct: 267 LRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVPT 326
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+ ++I++PTREL++Q V +L + + L +GG S + + +L ++I+ATP
Sbjct: 327 SR--VVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVIIATP 384
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GR +DH++N+ F ++ L++DEADR+L+ GF +++ +I+ LPK RQTMLFS
Sbjct: 385 GRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSATMTS 444
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPS--EXXXXXXXXXXXXXXXX 643
PV + VD K+ TV L Q +V + P E
Sbjct: 445 SVDNLIRVGLNK-PVRLMVDSQKK--TVVTLTQEFVRLRPGREEKRMGYLVYLCKNLYTE 501
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMC--IHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
V++FF HH + + L + C +HG Q++R + F + + LL TD+
Sbjct: 502 RVIIFFRQKKIA--HHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDL 559
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL-LILRPE 750
A+RGLDI VD ++ Y+ P + Y+HRVGRTAR G SG A+ L P+
Sbjct: 560 ASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARA-GRSGTAITLAAEPD 608
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 517 (187.1 bits), Expect = 2.6e-49, P = 2.6e-49
Identities = 124/342 (36%), Positives = 183/342 (53%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ + +A +MG+ T IQ++ IP LEGRD++G A+TGSGKT AF +P ++ +
Sbjct: 53 IIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQALMEA- 111
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINII 522
P+ G+++ +PTREL+ Q + L +I+GG A++ L K +II
Sbjct: 112 --PQTLFGLVL-APTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHII 168
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
VATPGRLLDHL+NT F +NL+ L IDEADR+LD+ F E + +I+ +LP+ R T LFS
Sbjct: 169 VATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFSA 228
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
PV + V + TV+ L+ Y+ P +
Sbjct: 229 TMSTKVESLQRASLSN-PVRVSVSSKYQ--TVSTLQSSYICIPHKHKNLYLVYLLNEFAG 285
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
++F ++ + +L + + +HG+ Q R +F + IL+ TDVA
Sbjct: 286 QSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVA 345
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
ARGLDIP+VD + +D P D K YIHRVGRTAR G SG A+
Sbjct: 346 ARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARA-GKSGVAI 386
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 530 (191.6 bits), Expect = 3.9e-49, P = 3.9e-49
Identities = 140/397 (35%), Positives = 205/397 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 199 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQSPV 258
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
T ++++ PTREL +Q V K+L ++ + T L +GG +++ L +I++ATP
Sbjct: 259 --TRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATP 316
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 317 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTD 376
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXXX- 644
PV I V+ + A L Q +V + P+
Sbjct: 377 EVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFVRIRPNREGDREAIVAALLTRTFTD 433
Query: 645 -VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVAA
Sbjct: 434 HVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAA 493
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQAK 762
RGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K AK
Sbjct: 494 RGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKAAK 552
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
P+ I + ++EK+ Y L + +E
Sbjct: 553 APVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 589
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 530 (191.6 bits), Expect = 5.7e-49, P = 5.7e-49
Identities = 140/397 (35%), Positives = 205/397 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 220 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQSPV 279
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
T ++++ PTREL +Q V K+L ++ + T L +GG +++ L +I++ATP
Sbjct: 280 --TRVLVLVPTRELGIQVHSVTKQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATP 337
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 338 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTD 397
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXXX- 644
PV I V+ + A L Q +V + P+
Sbjct: 398 EVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFVRIRPNREGDREAIVAALLTRTFTD 454
Query: 645 -VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVAA
Sbjct: 455 HVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAA 514
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQAK 762
RGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K AK
Sbjct: 515 RGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKAAK 573
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
P+ I + ++EK+ Y L + +E
Sbjct: 574 APVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 610
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 514 (186.0 bits), Expect = 5.7e-49, P = 5.7e-49
Identities = 136/418 (32%), Positives = 218/418 (52%)
Query: 387 IPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGK 446
+P + + F+ L G V + +A +G+ T+IQ IP L+GRD++G A+TGSGK
Sbjct: 18 VPVVEEARSFKDL-G-VTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGK 75
Query: 447 TLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQT---FGVLKELMKYHHHTYGLIM 503
T AF +P ++ + + P+ ++++PTREL+ Q F L + H +I+
Sbjct: 76 TGAFALPILQALLDA---PQR-LFALVLTPTRELAFQISEQFEALGSSIGVHS---AVIV 128
Query: 504 GGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED 563
GG +++ LAK +II+ATPGRL+DHL+NT F + L+ L++DEADRIL++ FE +
Sbjct: 129 GGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFETE 188
Query: 564 MKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVV 623
+ +I+ ++P+ R+T LFS PV V + TV L+Q Y+
Sbjct: 189 VDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYIF 245
Query: 624 CPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTT 683
PS+ M+F S+C + + LL + + +HG+ Q KR
Sbjct: 246 IPSKFKDSYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLG 305
Query: 684 TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
+ +F ILL TDVA+RGLDIP VD ++ +D P K+YIHRVGRTAR G SG +
Sbjct: 306 SLNKFKAKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARA-GRSGKS 364
Query: 744 LLILRPEELGF---LRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE 798
+ + ++ + +L K+P F + ++ + E++ F M +E
Sbjct: 365 ITFVTQYDVELFQRIEHLIGKKLPA----FPMQE-EEVMMLTERVAEAQRFARMELRE 417
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 528 (190.9 bits), Expect = 6.2e-49, P = 6.2e-49
Identities = 141/399 (35%), Positives = 204/399 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY PR
Sbjct: 196 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYK----PR 251
Query: 467 NG--TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
T ++++ PTREL +Q V K+L ++ T L +GG +++ L +I++A
Sbjct: 252 QAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIA 311
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 312 TPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATM 371
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXX 643
PV I V+ + A L Q ++ + P+
Sbjct: 372 TDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAALLMRTF 428
Query: 644 X--VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
VM+F + H LL + L V +HG Q +R +F + + IL+ TDV
Sbjct: 429 TDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDV 488
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQ 760
AARGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K
Sbjct: 489 AARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKA 547
Query: 761 AKIPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
AK P+ I + ++EKL Y L + +E
Sbjct: 548 AKAPVKARILPQDVILKFRDKIEKLEKDVYAVLQLEAEE 586
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 527 (190.6 bits), Expect = 7.2e-49, P = 7.2e-49
Identities = 125/362 (34%), Positives = 196/362 (54%)
Query: 389 SILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL 448
S++++T + LK ++++GF T+IQ +TIP L G+D+VG+A TGSGKT
Sbjct: 252 SMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTA 311
Query: 449 AFLVPAVE-LIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGAS 507
AF+VP +E L+Y K +P T ++I+ PTREL+MQ V ++ + L +GG S
Sbjct: 312 AFIVPILERLLYRPKKVPT--TRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLS 369
Query: 508 RQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQI 567
+ + Q+L K +I++ATPGR +DH++N+ F +N++ +++DEADR+L+ GF +++ +I
Sbjct: 370 LKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEI 429
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPS 626
+ PK RQTMLFS PV + VD+ K A + L Q +V V P
Sbjct: 430 IQACPKSRQTMLFSATMTDKVDDLIRLSLNR-PVRVFVDNKKTTAKL--LTQEFVRVRPQ 486
Query: 627 EXXXXXXXXXXX--XXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
++FF S + + L IHG Q +R
Sbjct: 487 RELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLSQEQRVRA 546
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
F + + LL TDVA+RG+DI ++ ++ Y+ P + Y+HRVGRTAR G SG A+
Sbjct: 547 LEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARA-GRSGRAI 605
Query: 745 LI 746
+
Sbjct: 606 TL 607
>FB|FBgn0027602 [details] [associations]
symbol:CG8611 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806
GeneTree:ENSGT00550000075041 EMBL:AF145609 RefSeq:NP_573214.1
RefSeq:NP_788922.1 UniGene:Dm.3172 ProteinModelPortal:Q86B47
SMR:Q86B47 IntAct:Q86B47 MINT:MINT-776497 PaxDb:Q86B47 PRIDE:Q86B47
EnsemblMetazoa:FBtr0074440 GeneID:32725 KEGG:dme:Dmel_CG8611
UCSC:CG8611-RB FlyBase:FBgn0027602 InParanoid:Q86B47 OMA:YTERDPE
OrthoDB:EOG47SQVT PhylomeDB:Q86B47 GenomeRNAi:32725 NextBio:780053
Bgee:Q86B47 Uniprot:Q86B47
Length = 975
Score = 380 (138.8 bits), Expect = 7.9e-49, Sum P(3) = 7.9e-49
Identities = 75/174 (43%), Positives = 122/174 (70%)
Query: 406 NTLKAIADM-GFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL--K 462
+ +K + D+ ++T +Q +TIP +L+G+D++ ++TGSGKTLA+ +P VEL+ +
Sbjct: 337 HAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPR 396
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINI 521
++G ++I PTREL MQT+ ++++L+K Y G ++GG SR++E +L KGINI
Sbjct: 397 IQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINI 456
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
++ TPGRL+DHL +T F LQ LI+DEADR+L++G+E D+KQ+V + K+R
Sbjct: 457 LIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQR 510
Score = 206 (77.6 bits), Expect = 7.9e-49, Sum P(3) = 7.9e-49
Identities = 39/96 (40%), Positives = 59/96 (61%)
Query: 672 IHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 731
+HG Q +R F F + + +LL TDV RG+D+P + +VQY PP +++HRVG
Sbjct: 684 LHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVG 743
Query: 732 RTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNE 767
RTAR G G A+L L P E F+R+L++ +I + +
Sbjct: 744 RTARA-GRKGRAVLFLTPSEAQFVRHLEKKRIRIQQ 778
Score = 52 (23.4 bits), Expect = 7.9e-49, Sum P(3) = 7.9e-49
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 646 MVFFSSCMSVKFHHELLN 663
+VF S+ V FHH++LN
Sbjct: 631 IVFMSTTEMVNFHHDMLN 648
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 528 (190.9 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 143/416 (34%), Positives = 215/416 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI+ MGF + T IQ +P L G+D+ A TG+GKT AF++P +E LIY PR
Sbjct: 213 LKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVLERLIYK----PR 268
Query: 467 NG--TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
T ++++ PTREL +Q V ++L ++ + L +GG +++ L G ++++A
Sbjct: 269 ETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALRAGPDVLIA 328
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+DHL NTP F ++ LI+DEADR+LD FEE MK+I+ + +RQTMLFS
Sbjct: 329 TPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRMCAYQRQTMLFSATM 388
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXX 643
PV I V+ + A L Q +V + P++
Sbjct: 389 SEEVKDLASVSLKQ-PVRIFVNSNTDVAPY--LRQEFVRIRPNKEGDREAIVAALLTRTF 445
Query: 644 X--VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
VM+F + H LL + L V +HG Q +R + +F + + IL+ TDV
Sbjct: 446 QDHVMLFTQTKKQAHRMHILLGLMGLKVGELHGNLSQTQRLESLRRFKDEQIDILVATDV 505
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQ 760
AARGLDI V ++ + P+ K Y+HRVGRTAR G G ++ ++ E L+ + K+
Sbjct: 506 AARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARA-GKVGRSVSLVGETERKMLKEIVKK 564
Query: 761 AKIPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKEAFKAYVRAYDSHHLKQI 815
AK P+ I + +EKL Y L + +E A+ A S K++
Sbjct: 565 AKFPVKARVIPQEVILKFRDLIEKLEKDVYAVLCLEKEEKEMAHSEAQISSAQKRL 620
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 526 (190.2 bits), Expect = 1.2e-48, P = 1.2e-48
Identities = 139/397 (35%), Positives = 204/397 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 199 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPV 258
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
T ++++ PTREL +Q V K+L ++ T L +GG +++ L +I++ATP
Sbjct: 259 --TRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALRAAPDILIATP 316
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 317 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTD 376
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXXX- 644
PV I V+ + A L Q ++ + P+
Sbjct: 377 EVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAALLMRTFTD 433
Query: 645 -VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVAA
Sbjct: 434 HVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAA 493
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQAK 762
RGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K AK
Sbjct: 494 RGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKAAK 552
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
P+ I + ++EK+ Y L + +E
Sbjct: 553 APVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 589
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 509 (184.2 bits), Expect = 2.1e-48, P = 2.1e-48
Identities = 123/354 (34%), Positives = 184/354 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKA+ D+GF T IQ IP +LEG +LVG A TG+GKT A+L+P ++ I K
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGK----- 68
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
++I++PTREL++Q + +L KY + GG + + + + L +G+ +IV TPG
Sbjct: 69 KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPG 128
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
R+LDH+ F ++ +I+DEAD +LD+GF +D++ I+N L R+QT+LFS
Sbjct: 129 RILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAP 187
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMV 647
Y V E TV + Q Y P +V
Sbjct: 188 IKTIIKKFLGG---YKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPIQAIV 244
Query: 648 FFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLD 707
F + V E LN+ +HG Q +RT T F +T +L+ TDVAARGLD
Sbjct: 245 FCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLD 304
Query: 708 IPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA 761
IP V ++ +D P +P+ YIHR+GRT R G G A+ ++ E L+ +++A
Sbjct: 305 IPDVSHVINFDIPQNPESYIHRIGRTGRA-GREGKAITLINYRERKLLKAIEEA 357
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 509 (184.2 bits), Expect = 2.1e-48, P = 2.1e-48
Identities = 123/354 (34%), Positives = 184/354 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKA+ D+GF T IQ IP +LEG +LVG A TG+GKT A+L+P ++ I K
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGK----- 68
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
++I++PTREL++Q + +L KY + GG + + + + L +G+ +IV TPG
Sbjct: 69 KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPG 128
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
R+LDH+ F ++ +I+DEAD +LD+GF +D++ I+N L R+QT+LFS
Sbjct: 129 RILDHI-GRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAP 187
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMV 647
Y V E TV + Q Y P +V
Sbjct: 188 IKTIIKKFLGG---YKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPIQAIV 244
Query: 648 FFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLD 707
F + V E LN+ +HG Q +RT T F +T +L+ TDVAARGLD
Sbjct: 245 FCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLD 304
Query: 708 IPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA 761
IP V ++ +D P +P+ YIHR+GRT R G G A+ ++ E L+ +++A
Sbjct: 305 IPDVSHVINFDIPQNPESYIHRIGRTGRA-GREGKAITLINYRERKLLKAIEEA 357
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 523 (189.2 bits), Expect = 2.7e-48, P = 2.7e-48
Identities = 133/364 (36%), Positives = 193/364 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS-GKTLAFLVPAVE-LIYNLKFMP 465
LKAI +GF + T IQ IP L G+D+ A TG+ GKT AF++P +E LIY + P
Sbjct: 192 LKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTVGKTAAFILPVLERLIYKPRQAP 251
Query: 466 RNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
T ++++ PTREL +Q V K+L ++ T L +GG + + L G +I++AT
Sbjct: 252 I--TRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSGPDILIAT 309
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ L + RQTMLFS
Sbjct: 310 PGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQTMLFSATMT 369
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXX- 643
P I V+ + A L Q ++ + P+
Sbjct: 370 EEVKDLASVSLKN-PTRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVSALLTRTFP 426
Query: 644 -XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVA
Sbjct: 427 DHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVATDVA 486
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQA 761
ARGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ EE L+ + K A
Sbjct: 487 ARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARA-GRAGRSVSLVGEEERKMLKEIVKAA 545
Query: 762 KIPL 765
K P+
Sbjct: 546 KTPV 549
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 507 (183.5 bits), Expect = 3.5e-48, P = 3.5e-48
Identities = 120/327 (36%), Positives = 180/327 (55%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+A +G+TK T+IQ IP L+GRD++G A+TGSGKT AF +P + + P+
Sbjct: 36 EACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLET---PQR- 91
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
++++PTREL+ Q + L +I+GG +++ LAK +I++ATPGR
Sbjct: 92 LFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGR 151
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+DHL+NT F + L+ L++DEADRIL++ FE ++ +I+ ++P+ R+T LFS
Sbjct: 152 LIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKKV 211
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
PV V + TV L+Q Y+ PS+ M+F
Sbjct: 212 QKLQRAALKN-PVKCAVSSKYQ--TVEKLQQYYLFIPSKFKDTYLVYILNELAGNSFMIF 268
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
S+C + + LL + + +HG+ Q KR + +F ILL TDVA+RGLDI
Sbjct: 269 CSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDI 328
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTAR 735
P VD +V +D P K+YIHRVGRTAR
Sbjct: 329 PHVDVVVNFDIPTHSKDYIHRVGRTAR 355
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 523 (189.2 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 137/397 (34%), Positives = 205/397 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 230 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPV 289
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
T ++++ PTREL +Q V ++L ++ + T L +GG +++ L +I++ATP
Sbjct: 290 --TRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQEAALRAAPDILIATP 347
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 348 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLFSATMTD 407
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXXXXXX- 644
PV I V+ + A L Q ++ + P+
Sbjct: 408 EVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAALLTRTFTD 464
Query: 645 -VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
VM+F + H LL + L V +HG Q +R +F + + IL+ TDVAA
Sbjct: 465 HVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAA 524
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQAK 762
RGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ ++ +E L+ + K AK
Sbjct: 525 RGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA-GRAGRSVSLVGEDERKMLKEIVKAAK 583
Query: 763 IPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
P+ I + ++EK+ Y L + +E
Sbjct: 584 APVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 620
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 505 (182.8 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 121/373 (32%), Positives = 200/373 (53%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
MG ++ T +QA IPP+L+GRD +G AKTGSGKT AF++P ++++ + G ++
Sbjct: 20 MGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSEDPY----GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +++GG A+A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K L+ L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 136 RSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTLNE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + + E TV L+Q Y++ P ++
Sbjct: 196 LKSLAMNR-PFFW--EAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F +C + + +L P + +H KQ +R +F ++ IL+ TDVAARGL
Sbjct: 253 IFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-KIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G +G ++ ++ ++ + +++ K+ L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRNGISITMVTQYDIHLVHAIEEEIKLKL 371
Query: 766 NEFEFSWSKISDI 778
EF + DI
Sbjct: 372 QEFSVEEKLVLDI 384
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 505 (182.8 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 121/373 (32%), Positives = 200/373 (53%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
MG ++ T +QA IPP+L+GRD +G AKTGSGKT AF++P ++++ + G ++
Sbjct: 23 MGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSEDPY----GIFCLV 78
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +++GG A+A +L++ ++++ATPGRL DHL
Sbjct: 79 LTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLADHL 138
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K L+ L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 139 RSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTLNE 198
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + + E TV L+Q Y++ P ++
Sbjct: 199 LKSLAMNR-PFFW--EAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSII 255
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F +C + + +L P + +H KQ +R +F ++ IL+ TDVAARGL
Sbjct: 256 IFTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGL 315
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-KIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G +G ++ ++ ++ + +++ K+ L
Sbjct: 316 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRNGISITMVTQYDIHLVHAIEEEIKLKL 374
Query: 766 NEFEFSWSKISDI 778
EF + DI
Sbjct: 375 QEFSVEEKLVLDI 387
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 502 (181.8 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 119/374 (31%), Positives = 195/374 (52%)
Query: 392 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 451
S+T FE L G + E ++ ++G K T +Q +P +L GRD++G A+TGSGKT AF
Sbjct: 56 SATNFEGL-G-LAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFA 113
Query: 452 VPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
+P +++ L P G ++++PTREL+ Q K L + +I+GG +
Sbjct: 114 LP---ILHRLAEDPY-GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQ 169
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEF--LYKNLQCLIIDEADRILDIGFEEDMKQIVN 569
L +I++ TPGR+ L+N P+ ++ + L++DEADR+LD+GF+++++ I
Sbjct: 170 TMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQ 229
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVV---CPS 626
LPK RQT+LFS Y + K TV L Q ++
Sbjct: 230 CLPKSRQTLLFSATMTSNLQALLEHSSNKAYFYEAYEGLK---TVDTLTQQFIFEDKDAK 286
Query: 627 EXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFF 686
E M+F S+C + + +L+ +++ + +H Q R +
Sbjct: 287 ELYLVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALS 346
Query: 687 QFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI 746
+F + + ILL TDVA+RGLDIP VD ++ YD P DP++Y+HRVGRTAR G G A+ I
Sbjct: 347 KFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARA-GRGGLAVSI 405
Query: 747 LRPEELGFLRYLKQ 760
+ ++ + +++
Sbjct: 406 ITETDVKLIHKIEE 419
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 501 (181.4 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 130/384 (33%), Positives = 203/384 (52%)
Query: 380 SADVSLSIPSILSSTQ--FEALKG-KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDL 436
S+ S SI +I + F+ K + + L++I M FTK T IQ+ IP LEG+D+
Sbjct: 104 SSTTSSSITTIDPDAELKFKTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDI 163
Query: 437 VGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQ---TFGVLKELMK 493
+G A+TGSGKT AF +P ++ +++ + P ++++PTREL+ Q TF L M
Sbjct: 164 IGLAQTGSGKTAAFAIPILQSLWHAQ-QPYFA---LVLAPTRELTFQIKDTFDALGSSMG 219
Query: 494 YHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEAD 553
I+GG +A+ L + ++IVATPGR++DHL++T F KNL+ L++DEAD
Sbjct: 220 LRS---SCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEAD 276
Query: 554 RILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEAT 613
R+LD+ F + +I+ ++P +R T LFS PV + V + T
Sbjct: 277 RLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHN-PVRVAVSSKYQ--T 333
Query: 614 VAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIH 673
L Q ++ ++VF + + L + + +H
Sbjct: 334 ADNLVQSMMLVNDGYKNTILIHLLNEFMGKSIIVFTRTVAHAQRTALLARILGFNAVPLH 393
Query: 674 GKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRT 733
G+ Q +R + +F + + IL+ TDVAARGLDIP+VD ++ YD P D K YIHRVGRT
Sbjct: 394 GQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRT 453
Query: 734 ARGEGSSGHALLILRPEELG-FLR 756
AR G SG ++ ++ +L +LR
Sbjct: 454 ARA-GRSGKSISLITQYDLEMYLR 476
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 514 (186.0 bits), Expect = 4.9e-47, P = 4.9e-47
Identities = 126/356 (35%), Positives = 192/356 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKA+ +GF++ T IQA+ IP L G+D++ SA TGSGKT AFL+P +E + +
Sbjct: 202 LKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLL-FRDSEYR 260
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
++I+ PTREL++Q V++ L ++ + T LI+GG S +A+ +L K ++++ATPG
Sbjct: 261 AIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPG 320
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
RL+DHL N +L+ LI+DEADR+LD+GF++++ +IV P RQTMLFS
Sbjct: 321 RLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDE 380
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCP---SEXXXXXXXXXXXXXXXX 643
P+ + VD + + LEQ +V + P S+
Sbjct: 381 VKTLAKLSLQQ-PIRVQVDALMQVTST--LEQEFVKIKPQHLSDRPAILLSLCTRVFNQG 437
Query: 644 XVMVFFSSCMSVKFHHEL---LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++F C S K H L DL +HG Q +R + QF + + LL +D
Sbjct: 438 GTIIF---CRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASD 494
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLR 756
VA+RGLDI V ++ Y+ P++ YIHRVGRTAR G G + + + L+
Sbjct: 495 VASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARA-GMDGKSCSFITDNDRKLLK 549
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 515 (186.3 bits), Expect = 5.0e-47, P = 5.0e-47
Identities = 123/343 (35%), Positives = 183/343 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ +A + FT T IQ +TIP L G+D+VGSA TGSGKT AF+VP +E L F PR
Sbjct: 310 LRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE---RLLFRPRK 366
Query: 468 --GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
+ + I+ PTREL++Q + V +L Y T+ ++GG S + + L K ++I+AT
Sbjct: 367 VPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQLVGGFSLREQENVLKKRPDVIIAT 426
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGR +DH++N+ F L+ L++DEADR+L+ GF +++ +I+ +PK RQTMLFS
Sbjct: 427 PGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIPKSRQTMLFSATMT 486
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS--EXXXXXXXXXXXXXXXX 643
PV + VD TK+ V +++ + P +
Sbjct: 487 DSVDKLIRVGLNR-PVRLMVD-TKKNTAVTLVQEFVRLRPGREDKRLGYLLHLCKEVYTG 544
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
V+VFF + + L +HG Q +R + F + LL TD+A+
Sbjct: 545 RVIVFFRQKKEAHRVRIVFGLLGLKAAELHGSMSQEQRIKSVESFRDGNVNFLLATDLAS 604
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI 746
RGLDI V+ ++ Y+ P + Y+HRVGRTAR G SG A I
Sbjct: 605 RGLDIKGVETVINYEAPQSHEIYVHRVGRTARA-GRSGRACTI 646
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 496 (179.7 bits), Expect = 6.1e-47, P = 6.1e-47
Identities = 127/369 (34%), Positives = 194/369 (52%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI--YN 460
V E +KA +G+ ++IQA +P LEG+D++G A+TGSGKT AF +P ++ + Y
Sbjct: 16 VREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALLEYV 75
Query: 461 LKFMPRNGTG------IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQK 514
P+ G ++SPTREL++Q + L +++GG R +
Sbjct: 76 YDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIA 135
Query: 515 LAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR 574
L K ++IVATPGRL DH+ +T F K+L+ L++DEADR+L+ FE+ + QI+ +P
Sbjct: 136 LGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLE 195
Query: 575 RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXX 634
R+T LFS PV I + + +TV L+Q Y ++
Sbjct: 196 RKTFLFSATMTKKVRKLQRACLRN-PVKI--EAASKYSTVDTLKQQYRFVAAKYKDCYLV 252
Query: 635 XXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETG 694
M+F +C +F +L + + I G+ Q KR +F E
Sbjct: 253 YILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECN 312
Query: 695 ILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF 754
IL+CTDVA+RGLDIP+VD ++ YD P + K+YIHRVGRTAR G SG + ++ EL +
Sbjct: 313 ILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARA-GRSGVGISLVNQYELEW 371
Query: 755 LRYLKQAKI 763
Y++ K+
Sbjct: 372 --YIQIEKL 378
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 495 (179.3 bits), Expect = 7.9e-47, P = 7.9e-47
Identities = 122/352 (34%), Positives = 187/352 (53%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE+L G V + A +GF K EIQ +IP L+GRD++G A+TGSGKT AF++P +
Sbjct: 121 FESL-G-VHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVL 178
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
+ + P+ G + ++PTREL+ Q + +++GG +++ L
Sbjct: 179 QKLLEA---PQ-GLFCLALAPTRELAYQIADQFNAIGSTIGVKTCVLVGGIDSMSQSLAL 234
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
AK +++V +PGR+L HL++T F ++++ I+DEADR+ FEE++ I+ ++PK R
Sbjct: 235 AKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIPKER 294
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
T LFS PV + V + TV L Q Y+ P +
Sbjct: 295 NTYLFSATMTSKVAKLQRASLVN-PVKVQV--ASKYQTVDTLLQQYLFVPFKYKDCYLAY 351
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
++F S+C S +L + + I+G Q KR + +F I
Sbjct: 352 ILNELAGNLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGTKSI 411
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
L+ TDVAARGLDIP+VD ++ YD P + KEY+HRVGRTAR G+SG A+ I+
Sbjct: 412 LVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARA-GNSGRAITIV 462
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 493 (178.6 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 116/355 (32%), Positives = 191/355 (53%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
KA+++ G+ + IQA+ IP +L G+D++ +A+TG+GKT F +P +EL+
Sbjct: 14 KAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKSGQ 73
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
T ++++PTREL+ Q ++ KY ++ GG + KL G++++VATPGR
Sbjct: 74 TRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVDVLVATPGR 133
Query: 529 LLDHLQ-NTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
LLD +Q N +F L+ L++DEADR+LD+GF D+K+I+ LLP +RQ ++FS
Sbjct: 134 LLDLVQQNAVKF--NQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSDE 191
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX--XV 645
PV I V T A ++Q +CP + V
Sbjct: 192 IRELAKGLVNH-PVEISV--TPRNAAATTVKQW--ICPVDKTQKSALLIQLIKQENWQQV 246
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
+VF + + L ++ IHG + Q RT F + E +L+ TD+AARG
Sbjct: 247 LVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARG 306
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
LDI + +V +D P+ P++Y+HR+GRT R G++G A+ ++ EE+ L+ +++
Sbjct: 307 LDIDQLPQVVNFDLPNVPEDYVHRIGRTGRA-GATGQAVSLVSSEEIKLLKDIER 360
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 493 (178.6 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 127/364 (34%), Positives = 193/364 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
++A ++ ++K T IQ++ IPP LEG D++G A+TGSGKT AF +P I N + +
Sbjct: 93 IQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIP----ILNRLWHDQE 148
Query: 468 GTGIIIISPTRELSMQ---TFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
I++PTREL+ Q TF L LM I+GG + +A+ L + +II+A
Sbjct: 149 PYYACILAPTRELAQQIKETFDSLGSLMGVRSTC---IVGGMNMMDQARDLMRKPHIIIA 205
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP-KRRQTMLFSXX 583
TPGRL+DHL+NT F + L+ L++DEADR+LD+ F + +I+ ++P + R T LFS
Sbjct: 206 TPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSAT 265
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
PV V + + TV L Q +V P
Sbjct: 266 MTSKIDKLQRASLTN-PVKCAVSNKYQ--TVDTLVQTLMVVPGGLKNTYLIYLLNEFIGK 322
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
+++F + + + L N ++ +HG Q +R + F + IL+ TDVAA
Sbjct: 323 TMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAA 382
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-- 761
RGLDIP+VD +V YD P D K YIHRVGRTAR G SG ++ ++ +L + +++
Sbjct: 383 RGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARA-GRSGKSISLVSQYDLELILRIEEVLG 441
Query: 762 -KIP 764
K+P
Sbjct: 442 KKLP 445
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 491 (177.9 bits), Expect = 2.2e-46, P = 2.2e-46
Identities = 120/349 (34%), Positives = 188/349 (53%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+GF + IQA TIP +L+GRD++ SAKTGSGKT +F +P ++ L P G +I
Sbjct: 22 LGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIP---ILNQLSEDPY-GVFAVI 77
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL++Q + + +++GG +A L K +IIVATPGRL HL
Sbjct: 78 LTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPGRLASHL 137
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP--KRRQTMLFSXXXXXXXXXX 591
N + K + L++DEADR+L FE ++ I+ LP ++RQT+LFS
Sbjct: 138 NNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPPPEKRQTLLFSATMTKNLTKL 197
Query: 592 XXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSS 651
P +I D++K + TV L+Q Y+ P+ +VF ++
Sbjct: 198 DSIALNK-P-FIFEDNSKYD-TVDTLKQEYIYMPAPTKDCYLVYILKKHEGSSAIVFVNN 254
Query: 652 CMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAV 711
C +V+ +LN +D+P + +H Q R F + + +L+ TDVA+RGLDIP V
Sbjct: 255 CYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDV 314
Query: 712 DWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
++ Y + K+YIHRVGRTAR G SG A+ + P ++ ++ +++
Sbjct: 315 QIVINYKLSNSSKDYIHRVGRTARF-GRSGRAISFITPHDVSLIKGIEE 362
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 490 (177.5 bits), Expect = 2.8e-46, P = 2.8e-46
Identities = 132/413 (31%), Positives = 209/413 (50%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F+ L G + + +KAI MGF + T IQA+TIP L+ +D++G A+TG+GKT AF +P
Sbjct: 2 TTFQEL-G-LSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
VE + N+K + ++++PTREL++Q L ++ I GG + + +
Sbjct: 60 IVEKV-NVK---NSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K ++IV TPGR++DH+ N +++ +++DEAD +L++GF ED++ I++ +P
Sbjct: 116 ALKKHPHVIVGTPGRIIDHI-NRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPA 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
RQT+LFS P + V +E TV ++Q Y+ +
Sbjct: 175 ERQTLLFSATMPDPIRRIAERFMNE-PELVKVK--AKEMTVPNIQQYYLEVHEKKKFDIL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
IL+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G +G A+ + P E+G
Sbjct: 292 EILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKTGVAMTFVTPREIG 350
Query: 754 FLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRA 806
L ++++ + E D L+ ++ I+ LN+ E Y RA
Sbjct: 351 QLHHIERTT--KRKMERMKPPTLDEALEGQQRIAIEKLLNVVETENLSFYKRA 401
>TAIR|locus:2038431 [details] [associations]
symbol:AT1G63250 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 EMBL:AC022355 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 UniGene:At.52694 ProtClustDB:CLSN2713541
IPI:IPI00538833 PIR:C96658 RefSeq:NP_176514.1 UniGene:At.36158
ProteinModelPortal:Q9C8S9 SMR:Q9C8S9 PaxDb:Q9C8S9 PRIDE:Q9C8S9
EnsemblPlants:AT1G63250.1 GeneID:842631 KEGG:ath:AT1G63250
GeneFarm:1027 TAIR:At1g63250 InParanoid:Q9C8S9 OMA:TSSRAHI
PhylomeDB:Q9C8S9 Genevestigator:Q9C8S9 GermOnline:AT1G63250
Uniprot:Q9C8S9
Length = 798
Score = 508 (183.9 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 144/439 (32%), Positives = 233/439 (53%)
Query: 389 SILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL 448
SI S+ +F+ + + TLKA++ G KMT +Q T+ L+G+D + AKTG+GK++
Sbjct: 323 SIYSAKRFD--ESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSM 380
Query: 449 AFLVPAVELIYNLKFMPRNGTGI--------IIISPTRELSMQTFGVLKELMKYHHHTYG 500
AFL+PA+E + LK M +G G+ +I+ PTREL+ Q K L+K+H G
Sbjct: 381 AFLLPAIETV--LKAM-NSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGI-G 436
Query: 501 L--IMGGASRQAEAQKL-AKGINIIVATPGRLLDHLQNTPEFLYK--NLQCLIIDEADRI 555
+ ++GG + + Q+L ++ I++ATPGRLLDH++N + L+ I+DEAD +
Sbjct: 437 VQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLL 496
Query: 556 LDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVA 615
LD+GF D+++I++ LP++RQ++LFS YI T
Sbjct: 497 LDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHD 556
Query: 616 GLEQGYVVCPSEXXXXXXXXXXXXXXXXX----VMVFFSSCMSVKFHHELLNYIDLPVMC 671
+ Q +V P E ++VF S+ M + LL + L V
Sbjct: 557 KVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLNVRE 616
Query: 672 IHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 731
IH ++ Q+ RT +F + IL+ +DV+ARG++ P V ++Q P D ++YIHR+G
Sbjct: 617 IHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLG 676
Query: 732 RTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYF 791
RT R EG G LL++ P E FL LK +PL S ++ Q+++ ++K
Sbjct: 677 RTGR-EGKGGEGLLLIAPWERYFLDELKD--LPLEPIPAP-DLDSIVKHQVDQSMAK--- 729
Query: 792 LNMSGKEA-FKAYVRAYDS 809
++ S KEA + A++ Y+S
Sbjct: 730 IDTSIKEAAYHAWLGYYNS 748
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 506 (183.2 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 117/344 (34%), Positives = 191/344 (55%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LK +A +G+ K + IQ+ TIP L G+D++ A TGSGKT AF++P +E L+Y K
Sbjct: 243 LKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY--KPAKI 300
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHH-TYGLIMGGASRQAEAQKLAKGINIIVAT 525
T +I++ PTREL++Q V K++ ++ T+GL +GG + + + Q L +I++AT
Sbjct: 301 ASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIAT 360
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGR +DH++N+ F +++ L++DEADR+L+ GF++++ +I+ LLP RQ +LFS
Sbjct: 361 PGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATMN 420
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXX-----X 640
PV I +D K+ AT L Q +V
Sbjct: 421 SKIKSLVSLSLKK-PVRIMIDPPKKAATK--LTQEFVRIRKRDHLKPALLFNLIRKLDPT 477
Query: 641 XXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++VF + + ++ + + V +HG Q +R + +F N E +L+CTD
Sbjct: 478 GQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTD 537
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
+A+RGLDIP ++ ++ YD P + Y+HRVGRTAR G G ++
Sbjct: 538 LASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARA-GREGRSV 580
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 489 (177.2 bits), Expect = 3.7e-46, P = 3.7e-46
Identities = 120/343 (34%), Positives = 187/343 (54%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
E +A ++ + ++IQ IP L+G+D++G A+TGSGKT AF +P +++ L
Sbjct: 70 EALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALP---ILHALLEN 126
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
P+ +++ +PTREL+ Q + L +++GG A+ +LAK +II+A
Sbjct: 127 PQRYFALVL-TPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIA 185
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+DHL+N F K ++ L++DEADRIL++ FE ++ +I+ +LP+ R+T LFS
Sbjct: 186 TPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATM 245
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
PV + V + + TV L+Q Y+ P +
Sbjct: 246 TKKVKKLQRASLKD-PVKVEVSNKYQ--TVEQLQQSYLFIPVKYKDVYLVHILNELAGNS 302
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
M+F S+C + +L + L + +HG+ Q KR +F IL+ TDVA+R
Sbjct: 303 FMIFCSTCNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASR 362
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
GLDIP VD +V +D P K+YIHRVGRTAR G SG A+ ++
Sbjct: 363 GLDIPHVDVVVNFDIPTHSKDYIHRVGRTARA-GRSGKAITLV 404
>TAIR|locus:2054688 [details] [associations]
symbol:AT2G07750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AC004483 IPI:IPI00546939 PIR:E84488
RefSeq:NP_178818.1 UniGene:At.52694 ProteinModelPortal:O80792
SMR:O80792 PaxDb:O80792 PRIDE:O80792 EnsemblPlants:AT2G07750.1
GeneID:815422 KEGG:ath:AT2G07750 GeneFarm:994 TAIR:At2g07750
InParanoid:O80792 OMA:FRKTALK PhylomeDB:O80792
ProtClustDB:CLSN2713541 Genevestigator:O80792 GermOnline:AT2G07750
Uniprot:O80792
Length = 845
Score = 508 (183.9 bits), Expect = 4.3e-46, P = 4.3e-46
Identities = 144/439 (32%), Positives = 235/439 (53%)
Query: 389 SILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL 448
SI S+ +F+ + + TLKA++ G KMT +Q T+ L+G+D + AKTG+GK++
Sbjct: 370 SIYSAKRFD--ESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSM 427
Query: 449 AFLVPAVELIYNLKFMPRNGTGI--------IIISPTRELSMQTFGVLKELMKYHHHTYG 500
AFL+PA+E + LK M +G G+ +I+ PTREL+ Q K L+K +H G
Sbjct: 428 AFLLPAIETV--LKAM-NSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLK-NHDGIG 483
Query: 501 L--IMGGASRQAEAQKL-AKGINIIVATPGRLLDHLQNTPEFLYK--NLQCLIIDEADRI 555
+ ++GG + + Q+L ++ I++ATPGRLLDH++N + L+ I+DEAD +
Sbjct: 484 VQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADLL 543
Query: 556 LDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVA 615
LD+GF+ D+++I++ LP++RQ++LFS YI T
Sbjct: 544 LDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVETHD 603
Query: 616 GLEQGYVVCPSEXXXXXXXXXXXXXXXXX----VMVFFSSCMSVKFHHELLNYIDLPVMC 671
++Q +V P E ++VF S+ M + LL + L V
Sbjct: 604 KVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLNVRE 663
Query: 672 IHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVG 731
IH ++ Q+ RT +F + IL+ +DV+ARG++ P V ++Q P D ++YIHR+G
Sbjct: 664 IHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLG 723
Query: 732 RTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYF 791
RT R EG G LL++ P E FL LK +PL S ++ Q+++ ++K
Sbjct: 724 RTGR-EGKGGKGLLLIAPWERYFLDELKD--LPLEPIPAP-DLDSRVKHQVDQSMAK--- 776
Query: 792 LNMSGKEA-FKAYVRAYDS 809
++ S KEA + A++ Y+S
Sbjct: 777 IDTSIKEAAYHAWLGYYNS 795
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 488 (176.8 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 121/364 (33%), Positives = 191/364 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T+F L G + E LKA+ D G+ + IQA+ IP ++ GRD++ +A+TG+GKT F +P
Sbjct: 6 TKFTDL-G-LSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLP 63
Query: 454 AVELIYNLKF--MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
++ + + K + N +I++PTREL+ Q ++ KY + ++ GG +
Sbjct: 64 LLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+L +G++++VATPGRLLD L N + L+ I+DEADR+LD+GF D+K+++ L
Sbjct: 124 IARLRQGVDVLVATPGRLLD-LYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTAL 182
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
PK RQ +LFS P+ I VD E +T + Q +
Sbjct: 183 PKDRQNLLFSATFSPEIRALAKGMVNN-PLEISVD--AENSTAEKVTQWLTAVDKKRKPA 239
Query: 632 XXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
V+VF + + L L IHG + Q RT F +
Sbjct: 240 VLTHLIKENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDG 299
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
IL+ TD+AARG+DI + +V +D P+ P++Y+HR+GRTAR G++G AL ++ +E
Sbjct: 300 SVKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARA-GNTGQALSLVCADE 358
Query: 752 LGFL 755
L L
Sbjct: 359 LDLL 362
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 487 (176.5 bits), Expect = 6.1e-46, P = 6.1e-46
Identities = 130/381 (34%), Positives = 201/381 (52%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
++ T F L+ + E+ L+A+ D GFT+ T IQA IPP L+GRD++GSA TG+GKT A+
Sbjct: 1 MTVTTFSELE--LDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAY 58
Query: 451 LVPAVELIYNLKFMPRNGTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGAS 507
L+PA++ + L F PR +G I+I++PTREL+MQ +EL K+ H I GG +
Sbjct: 59 LLPALQHL--LDF-PRKKSGPPRILILTPTRELAMQVSDHARELAKHTHLDIATITGGVA 115
Query: 508 RQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQI 567
A+ ++ +I+VAT GRLL +++ F + ++ LI+DEADR+LD+GF +D++ I
Sbjct: 116 YMNHAEVFSENQDIVVATTGRLLQYIKEE-NFDCRAVETLILDEADRMLDMGFAQDIEHI 174
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS- 626
R+QT+LFS PV + + + E + Q Y
Sbjct: 175 AGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRERKK--IHQWYYRADDL 232
Query: 627 EXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI-DLPVM-C-IHGKQKQMKRTT 683
E +VF V HEL N++ + + C + G+ Q KR
Sbjct: 233 EHKTALLVHLLKQPEATRSIVFVRKRERV---HELANWLREAGINNCYLEGEMVQGKRNE 289
Query: 684 TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
+ +L+ TDVAARG+DIP V + +D P Y+HR+GRTAR G G A
Sbjct: 290 AIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTARA-GRKGTA 348
Query: 744 LLILRPEE---LGFL-RYLKQ 760
+ ++ + LG + RY+++
Sbjct: 349 ISLVEAHDHLLLGKVGRYIEE 369
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 486 (176.1 bits), Expect = 8.0e-46, P = 8.0e-46
Identities = 123/368 (33%), Positives = 191/368 (51%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
V + +A +GF T IQ IP +L RD++G A+TGSGKT AF +P ++ ++N
Sbjct: 53 VIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWN-- 110
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINII 522
P + ++++PTREL+ Q + + +I+GG +A L+K +++
Sbjct: 111 -NP-SPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVL 168
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
V TPGRL+DHL+NT F KNL+ LI+DEADR+LD+ F + +I+ ++P R+T+LFS
Sbjct: 169 VCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSA 228
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
PV + V + + +TV L Q Y+ P +
Sbjct: 229 TMTSKVEKLQRASLHQ-PVRVAV--SSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAG 285
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
+++F + + LL + + +HG+ Q R +F + L+ TDVA
Sbjct: 286 NSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVA 345
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG-FLRYLKQA 761
ARGLDIP VD ++ YD P D K YIHRVGRTAR G +G ++ ++ +L FLR
Sbjct: 346 ARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARA-GRAGKSIALVTQYDLEPFLRIEATI 404
Query: 762 KIPLNEFE 769
+ E+E
Sbjct: 405 GKKMQEYE 412
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 485 (175.8 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 124/367 (33%), Positives = 193/367 (52%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
++ + K + GI+I +PTREL++Q L ++ K+ I GG + +
Sbjct: 60 LLDKVDTHK---ESVQGIVI-APTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
L K +IIV TPGR+LDH+ N +N++ +++DEAD +L++GF ED++ I+ +P+
Sbjct: 116 ALKKHPHIIVGTPGRILDHI-NRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPE 174
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LFS P +I V +E T+ ++Q Y+ +
Sbjct: 175 THQTLLFSATMPDPIRRIAERFMTE-PQHIKVK--AKEVTMPNIQQFYLEVQEKKKFDVL 231
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAET 693
+VF + V E LN IHG Q KR + +F
Sbjct: 232 TRLLDIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSI 291
Query: 694 GILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELG 753
+L+ TDVAARGLDI V + +D P DP+ Y+HR+GRT R G G A+L + P E G
Sbjct: 292 EVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRA-GKKGIAMLFVTPRESG 350
Query: 754 FLRYLKQ 760
L+ +++
Sbjct: 351 QLKNIER 357
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 482 (174.7 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 123/377 (32%), Positives = 198/377 (52%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G + T +Q IP +LEGRD +G AKTGSGKT AF++P ++ L P G ++
Sbjct: 20 LGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---ILQKLSEDPY-GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +I+GG A+A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K +Q L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 136 RSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTLKE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + T TV L+Q Y++ P + ++
Sbjct: 196 LQGLATNE-PFFWEAQATVR--TVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++C + + +L + P + +H KQ +R +F ++ IL+ TDVA+RGL
Sbjct: 253 IFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G G A+ ++ ++ L ++ Q K L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRQGQAITLVTQYDIHLLHAIEEQIKQQL 371
Query: 766 NEFEFSWSKISDIQLQL 782
E +++ I Q+
Sbjct: 372 AELVVEEAEVLQILTQV 388
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 481 (174.4 bits), Expect = 2.8e-45, P = 2.8e-45
Identities = 125/357 (35%), Positives = 181/357 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+KAI MGF + T IQA+TIP L +D++G A+TG+GKT AF +P VE K P +
Sbjct: 15 MKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE-----KINPES 69
Query: 468 -GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM---GGASRQAEAQKLAKGINIIV 523
I+I+PTREL++Q V +EL K ++ GG + + L K NIIV
Sbjct: 70 PNIQAIVIAPTRELAIQ---VSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIV 126
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
TPGRLLDH+ N N+ +++DEAD +L++GF +D++ I++ +P QT+LFS
Sbjct: 127 GTPGRLLDHI-NRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSAT 185
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P ++ V +E TV+ ++Q Y+
Sbjct: 186 MPAPIKRIAERFMTE-PEHVKVK--AKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQSPE 242
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
+VF + V E LN IHG Q KR +F +L+ TDVAA
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
RGLDI V + +D P DP+ Y+HR+GRT R G +G A+ + P E LR ++Q
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRA-GKTGMAMTFITPREKSMLRAIEQ 358
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 480 (174.0 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 121/377 (32%), Positives = 199/377 (52%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G + T +Q IP +LEGRD +G AKTGSGKT AF++P ++ L P G ++
Sbjct: 20 LGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---ILQKLSEDPY-GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +I+GG A+A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K ++ L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 136 RSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + + +TV L+Q Y++ P + ++
Sbjct: 196 LQGLATNQ-PFFW--EAQAPVSTVEQLDQRYLLVPEKVKDAYLVHLIQRFQDEHEDWSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++C + + +L P + +H KQ +R +F ++ IL+ TDVA+RGL
Sbjct: 253 IFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G G A+ ++ ++ + ++ Q K L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRQGQAITLVTQYDIHLVHAIEEQIKKKL 371
Query: 766 NEFEFSWSKISDIQLQL 782
EF +++ I Q+
Sbjct: 372 EEFSVEEAEVLQILTQV 388
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 480 (174.0 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 121/377 (32%), Positives = 199/377 (52%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G + T +Q IP +LEGRD +G AKTGSGKT AF++P ++ L P G ++
Sbjct: 20 LGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---ILQKLSEDPY-GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +I+GG A+A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K ++ L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 136 RSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPARRQTLLFSATLTDTLRE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + + TV L+Q Y++ P + ++
Sbjct: 196 LQSLATNQ-PFFW--EAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++C + + +L + P + +H KQ +R +F ++ IL+ TDVA+RGL
Sbjct: 253 IFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G G A+ ++ ++ + ++ Q K L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRQGQAITLVTQYDIHLVHAIEEQIKKKL 371
Query: 766 NEFEFSWSKISDIQLQL 782
EF +++ I Q+
Sbjct: 372 EEFSVEEAEVLQILTQV 388
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 480 (174.0 bits), Expect = 3.7e-45, P = 3.7e-45
Identities = 121/395 (30%), Positives = 208/395 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE+L G + E ++ MG ++ T +Q + IP +L+GRD +G AKTGSGKT AF++P +
Sbjct: 4 FESL-G-LSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVL 61
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
+ + + G ++++PTREL+ Q + L K +I+GG + +L
Sbjct: 62 QKLSEDPY----GVFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLEL 117
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLP 572
+K +++VATPGRL DH++++ +Q LI+DEADR+L+ G F +D++ I++ +P
Sbjct: 118 SKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVP 177
Query: 573 KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXX 632
+RQT+LFS P + + + TV L+Q +++ P +
Sbjct: 178 AKRQTLLFSATLTDTLQQLQSIAMNR-PFFW--EHKSDVQTVEELDQRFILTPEKVKDAY 234
Query: 633 XXXXXXXXXXX----XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQF 688
+++F ++C S + +L + P + +H KQ +R +F
Sbjct: 235 LVHLIQTFQDEHDDWSIIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKF 294
Query: 689 CNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR 748
+ IL+ TDVAARGLDIP V ++ ++ P PK YIHRVGRTAR G +G ++ ++
Sbjct: 295 KSNVFKILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRNGVSITLVT 353
Query: 749 PEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQL 782
++ + ++ Q + L EF ++ I Q+
Sbjct: 354 QYDIHLINAIEEQNQTKLKEFPIEEKEVLKILTQV 388
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 497 (180.0 bits), Expect = 5.1e-45, P = 5.1e-45
Identities = 127/395 (32%), Positives = 206/395 (52%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
++AI +G+ T IQA TIP L GRD+ G A TG+GKT A+++P +E L + P N
Sbjct: 169 MRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLE---RLLYRPLN 225
Query: 468 G---TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
T ++++ PTREL Q + V K+L ++ GL +GG +A+ L + +I++A
Sbjct: 226 NKAITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIA 285
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+DH++NTP F +++ LI+DEADR+LD F E MK+I+N K RQTMLFS
Sbjct: 286 TPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATM 345
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXX---XX 641
P+ + V++ ++ A L Q ++ +
Sbjct: 346 SEQVKDLAAVSLDK-PIKVFVNNNQQVAF--NLRQEFIRIREDKEGDREPILASLICRTF 402
Query: 642 XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
MVF + H LL + + +HG Q +R + +F + +L+ TDV
Sbjct: 403 HDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDV 462
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLR-YLKQ 760
AARGLDI V ++ + P + YIHRVGRTAR G +G ++ + +E ++ +K
Sbjct: 463 AARGLDIVGVKTVINFVMPITTEHYIHRVGRTARA-GRAGISVSLAGEKERKIVKDIIKN 521
Query: 761 AK-------IPLNEFEFSWSKISDIQLQLEKLISK 788
A+ IP E +K++ ++ +++ ++ +
Sbjct: 522 AESTIKNRIIPPEIIEKYRNKLTSLEPEIQNILDE 556
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 478 (173.3 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 116/361 (32%), Positives = 186/361 (51%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
EN L+A+ ++G+ K T IQ+ +I PL+ G+D++G A+TG+GKT AF +P + + + +
Sbjct: 15 ENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKVTS-QTT 73
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-IMGGASRQAEAQKLAKGINIIV 523
P+ I++++PTREL++Q K+ + + L I GG S Q + L +G +IV
Sbjct: 74 PQ----ILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQVIV 129
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
TPGR++DH++ L + LQ L++DEAD +L +GF +D++ I+ P +RQ LFS
Sbjct: 130 GTPGRVMDHMRRGTLKL-ETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALFSAT 188
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
+ TV +EQ +V
Sbjct: 189 MPEQIKRVANKHLKNAT---NISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVENTE 245
Query: 644 XVMVFF---SSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
+++F +SC+ + E Y P +HG Q R Q N + IL+ TD
Sbjct: 246 GIIIFVRTRNSCVELAEKLEARGYASSP---LHGDMNQQARERAVEQLKNGKLDILIATD 302
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
VAARGLD+ + +V YD P D + Y+HR+GRT R G +G A+L + E+ LR +++
Sbjct: 303 VAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRA-GRTGMAILFVTSREMRMLRTIER 361
Query: 761 A 761
A
Sbjct: 362 A 362
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 478 (173.3 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 120/377 (31%), Positives = 198/377 (52%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G + T +Q IP +LEGRD +G AKTGSGKT AF++P ++ L P G ++
Sbjct: 20 LGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---ILQKLSEDPY-GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +I+GG +A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K ++ L++DEADR+L+ G F D++ I++ +P RRQT+LFS
Sbjct: 136 RSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLKE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + T TV L+Q Y++ P + ++
Sbjct: 196 LQGLATNQ-PFFWEAQATVR--TVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++C + + +L + P + +H KQ +R +F ++ IL+ TDVA+RGL
Sbjct: 253 IFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-KIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G G A+ ++ ++ L +++ K L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRQGQAITLVTQYDIHLLHAIEEEIKQQL 371
Query: 766 NEFEFSWSKISDIQLQL 782
E +++ I Q+
Sbjct: 372 AELAVEEAQVLQILTQV 388
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 477 (173.0 bits), Expect = 7.9e-45, P = 7.9e-45
Identities = 121/377 (32%), Positives = 198/377 (52%)
Query: 414 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIII 473
+G + T +Q IP +LEGRD +G AKTGSGKT AF++P ++ L P G ++
Sbjct: 20 LGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLP---ILQKLSEDPY-GIFCLV 75
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL 533
++PTREL+ Q + L K +I+GG A+A +L++ ++++ATPGRL DHL
Sbjct: 76 LTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHL 135
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIG---FEEDMKQIVNLLPKRRQTMLFSXXXXXXXXX 590
+++ F K ++ L++DEADR+L+ G F D++ I+ +P RRQT+LFS
Sbjct: 136 RSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPTRRQTLLFSATLTDTLKE 195
Query: 591 XXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX----XVM 646
P + + TV L+Q Y++ P + ++
Sbjct: 196 LQGLATNQ-PFFW--EAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQNFQDEHEDWSII 252
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++C + + +L + P + +H KQ +R +F ++ IL+ TDVA+RGL
Sbjct: 253 IFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGL 312
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPL 765
DIP V ++ ++ P PK YIHRVGRTAR G G A+ ++ ++ + ++ Q K L
Sbjct: 313 DIPTVQVVINHNTPGLPKIYIHRVGRTARA-GRQGQAITLVTQYDIHLVHAIEEQIKKQL 371
Query: 766 NEFEFSWSKISDIQLQL 782
E +K+ I Q+
Sbjct: 372 EELSVEEAKVLQILTQV 388
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 477 (173.0 bits), Expect = 7.9e-45, P = 7.9e-45
Identities = 128/428 (29%), Positives = 214/428 (50%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ L+++ MG T IQ + +P L G+DL+ S+KTGSGKTLAFL+PA++ + + + +
Sbjct: 10 QRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRAL 69
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+ ++I+ PTREL+ Q + L+ L+ + ++GG + +A+ LAK + IVA
Sbjct: 70 SKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVA 129
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP-KRRQTMLFSXX 583
TPGR+ DHL+ FL L+ LI+DEADR+LD+GF +K I KRRQT++FS
Sbjct: 130 TPGRIADHLEQKNLFL-NGLELLILDEADRMLDLGFAPQLKAINEAADHKRRQTLMFSAT 188
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EXXXXXXXXXXXXXXX 642
P+++ + E + Q +C +
Sbjct: 189 LDHSEINEIAAALLKNPLHVAIGTAHAEHQ--DISQRIYLCDHLDHKEALLSRLLSDESH 246
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
V++F ++ + L+ + G+ KQ R QF + IL+ TDVA
Sbjct: 247 KQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVA 306
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAK 762
+RGLD+ V ++ +D P +EY+HR+GRT R G+ G A+ ++ P++ K+ +
Sbjct: 307 SRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRA-GAKGDAISLVGPKDWDSF---KKVQ 362
Query: 763 IPLNE-FEFSW-----SKISDIQLQLEKLISKNYF-LNMSGKEAFKA-YVRAYDSHHLKQ 814
+ L + FE S +K + ++ + + + +K N GK K V+A S +
Sbjct: 363 LFLRKTFEISVIKGLEAKFTGLKDKPKSVATKGVVKANTKGKSKPKPNVVKAAPSRDKRF 422
Query: 815 IFDIDTMD 822
I +D D
Sbjct: 423 ITGVDVGD 430
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 477 (173.0 bits), Expect = 7.9e-45, P = 7.9e-45
Identities = 128/428 (29%), Positives = 214/428 (50%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ L+++ MG T IQ + +P L G+DL+ S+KTGSGKTLAFL+PA++ + + + +
Sbjct: 10 QRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRAL 69
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+ ++I+ PTREL+ Q + L+ L+ + ++GG + +A+ LAK + IVA
Sbjct: 70 SKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALAKEPHFIVA 129
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP-KRRQTMLFSXX 583
TPGR+ DHL+ FL L+ LI+DEADR+LD+GF +K I KRRQT++FS
Sbjct: 130 TPGRIADHLEQKNLFL-NGLELLILDEADRMLDLGFAPQLKAINEAADHKRRQTLMFSAT 188
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EXXXXXXXXXXXXXXX 642
P+++ + E + Q +C +
Sbjct: 189 LDHSEINEIAAALLKNPLHVAIGTAHAEHQ--DISQRIYLCDHLDHKEALLSRLLSDESH 246
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
V++F ++ + L+ + G+ KQ R QF + IL+ TDVA
Sbjct: 247 KQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQQQILVTTDVA 306
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAK 762
+RGLD+ V ++ +D P +EY+HR+GRT R G+ G A+ ++ P++ K+ +
Sbjct: 307 SRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRA-GAKGDAISLVGPKDWDSF---KKVQ 362
Query: 763 IPLNE-FEFSW-----SKISDIQLQLEKLISKNYF-LNMSGKEAFKA-YVRAYDSHHLKQ 814
+ L + FE S +K + ++ + + + +K N GK K V+A S +
Sbjct: 363 LFLRKTFEISVIKGLEAKFTGLKDKPKSVATKGVVKANTKGKSKPKPNVVKAAPSRDKRF 422
Query: 815 IFDIDTMD 822
I +D D
Sbjct: 423 ITGVDVGD 430
>UNIPROTKB|F5H5U2 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AC055713 EMBL:AC117503
HGNC:HGNC:20085 ChiTaRS:DDX55 IPI:IPI01010332
ProteinModelPortal:F5H5U2 SMR:F5H5U2 Ensembl:ENST00000538744
ArrayExpress:F5H5U2 Bgee:F5H5U2 Uniprot:F5H5U2
Length = 569
Score = 403 (146.9 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 105/309 (33%), Positives = 163/309 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
+E+L + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKTLAF++P +
Sbjct: 9 WESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPIL 68
Query: 456 ELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM--GGASRQAEA 512
E++ + + ++ G III+PTREL++Q VL K H + I+ GG + +
Sbjct: 69 EILLRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTK-HFPEFSQILWIGGRNPGEDV 127
Query: 513 QKLAK-GINIIVATPGRLLDHLQNTPEFL-----YKNLQCLIIDEADRILDIGFEEDMKQ 566
++ + G NIIVATPGRL D + E L ++L L++DEADR+LD+GFE +
Sbjct: 128 ERFKQQGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINT 187
Query: 567 IVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYI-----GVDDTKEEATVAGLEQGY 621
I+ LPK+R+T LFS PV + GV + + T + LE Y
Sbjct: 188 ILEFLPKQRRTGLFSATQTQEVENLVRAGLRN-PVRVSVKEKGVAASSAQKTPSRLENYY 246
Query: 622 VVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQM 679
+VC ++ +VFFS+C V+++ + L + + +MCIHGK K
Sbjct: 247 MVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEVLVKGVKIMCIHGKMKY- 305
Query: 680 KRTTTFFQF 688
KR F +F
Sbjct: 306 KRNKIFMEF 314
Score = 125 (49.1 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
Identities = 32/98 (32%), Positives = 51/98 (52%)
Query: 726 YIHRVGRTARGEGSSGHALLILRPEELGFLRYLK-QAKIPLNEFEFSWSKISDIQLQLEK 784
++HR GRTAR G G AL+ L P E ++ +L K PL E + +D+ +L+
Sbjct: 321 FVHRCGRTAR-IGHGGSALVFLLPMEESYINFLAINQKCPLQEMK-PQRNTADLLPKLKS 378
Query: 785 LISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD 822
+ + + G +AF +YV+AY H IF + +D
Sbjct: 379 MALADRAVFEKGMKAFVSYVQAYAKHECNLIFRLKDLD 416
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 487 (176.5 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 140/402 (34%), Positives = 202/402 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPR 466
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 223 LKAITVMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAPV 282
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTY----GLIMGGAS-RQAEAQKLAKGINI 521
T ++++ PTREL +Q V K+L + GL GG + EA A +I
Sbjct: 283 --TRVLVLVPTRELGIQVHSVTKQLAQSSLCVITTISGLFAGGLDVKSQEAALRAAXPDI 340
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
++ATPGRL+DHL N P F +++ LI+DEADR+LD FEE MK+I+ + RQTMLFS
Sbjct: 341 LIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSLHRQTMLFS 400
Query: 582 XXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV-VCPSEXXXXXXXXXXXXX 640
PV I V+ + A L Q ++ + P+
Sbjct: 401 ATMTDEVKDLASVSLKN-PVRIFVNSNTDVAPF--LRQEFIRIRPNREGDREAIVAALLM 457
Query: 641 XXXX--VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTT-TFFQFCNAETGILL 697
VM+F + H LL + L V +HG Q +R ++F + + IL+
Sbjct: 458 RTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRXLEALWRFKDEQIDILV 517
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRY 757
TDVAARGLDI V ++ + P+ K Y+HRVGRTAR G +G ++ +L+ E+
Sbjct: 518 ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARA-GRAGRSVSLLK--EI----- 569
Query: 758 LKQAKIPLNEFEFSWSKISDIQLQLEKLISKNY-FLNMSGKE 798
+K AK P+ I + ++EK+ Y L + +E
Sbjct: 570 VKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 611
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 353 (129.3 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 77/177 (43%), Positives = 116/177 (65%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+N LKAI GF T IQ ++IP +L+G D+VG A+TGSGKT AF++P ++ + +
Sbjct: 239 KNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQKLGD--HS 296
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
G +I+SPTREL++QTF V+K+ + LI+GG S + + LA+ +II+A
Sbjct: 297 TTVGVRAVILSPTRELAIQTFKVVKDFSQGTQLRTILIVGGDSMEDQFTDLARNPDIIIA 356
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
TPGRL+ HL T L K +Q ++ DEADR+ ++GF E + +I++ L + RQT+LFS
Sbjct: 357 TPGRLMHHLLETGMSLSK-VQYIVFDEADRLFEMGFNEQLTEILSKLSENRQTLLFS 412
Score = 203 (76.5 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 51/164 (31%), Positives = 89/164 (54%)
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F S+ V+F H LL + IHG + R +F + + G+++ TD+AARG
Sbjct: 501 IIFVSTKYHVEFIHILLERAGIASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAARG 560
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL--RYLKQAKI 763
+DIP +D ++ +D P K +IHRVGR AR G SG A ++ P+E+ ++ +L +
Sbjct: 561 IDIPLLDNVINFDFPPKEKIFIHRVGRVARA-GRSGIAYSLVSPDEVPYMIDLHLYLGRK 619
Query: 764 PLNEFEFSWSKISDIQLQL-----EKLISKNY-FLNMSGKEAFK 801
LN+F++ I+D + + +I + F+N+ KE +
Sbjct: 620 FLNKFQYEGQTINDPKYSFYGTIPQTIIDRETEFVNVQRKECIE 663
Score = 38 (18.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 156 VSFTECPNLTSHPFN--LTS-----AERRQTMLFS 183
+ F E L FN LT +E RQT+LFS
Sbjct: 378 IVFDEADRLFEMGFNEQLTEILSKLSENRQTLLFS 412
>GENEDB_PFALCIPARUM|PFB0860c [details] [associations]
symbol:PFB0860c "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AE001362
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802 HSSP:P10081
KO:K14777 PIR:C71604 RefSeq:XP_001349688.1
ProteinModelPortal:O96264 EnsemblProtists:PFB0860c:mRNA
GeneID:812770 KEGG:pfa:PFB0860c EuPathDB:PlasmoDB:PF3D7_0218400
OMA:KHRAKRV ProtClustDB:CLSZ2432676 Uniprot:O96264
Length = 562
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 121/374 (32%), Positives = 195/374 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE L +CE L++I ++G+ K TEIQ +P +D++G ++TGSGKT F++P
Sbjct: 158 FEDLN--ICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIP-- 213
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
++ +LK + + ++ISPTREL +Q + L I GG ++ L
Sbjct: 214 -ILQDLK-VNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNL 271
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
AK N+IV+TPGR+LDHL NT F KNL+ L+ DEAD++L FE + +++ +LP R
Sbjct: 272 AKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNR 331
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
T LFS PV + V + + +TV+ L + Y+ P +
Sbjct: 332 ITFLFSATMTKNVAKLKKACLKN-PVKVEVSN--KYSTVSTLIETYIFLPLKYKYTYLSS 388
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
+++F ++C + + + + L +C+HGK Q +R ++ F + I
Sbjct: 389 LCFHYQTRNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFKVNKYNI 448
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL-GF 754
L+ T V ARGLD+ + ++ +D KEYIHRVGRTAR G SG ++ + ++ F
Sbjct: 449 LISTQVGARGLDLQDIKIVINFDICSC-KEYIHRVGRTARA-GRSGKSITFVTQYDVENF 506
Query: 755 LRYLKQAKIPLNEF 768
L KQ +++F
Sbjct: 507 LAIEKQLNKKIDKF 520
>UNIPROTKB|O96264 [details] [associations]
symbol:PFB0860c "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 HSSP:P10081 KO:K14777 PIR:C71604
RefSeq:XP_001349688.1 ProteinModelPortal:O96264
EnsemblProtists:PFB0860c:mRNA GeneID:812770 KEGG:pfa:PFB0860c
EuPathDB:PlasmoDB:PF3D7_0218400 OMA:KHRAKRV ProtClustDB:CLSZ2432676
Uniprot:O96264
Length = 562
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 121/374 (32%), Positives = 195/374 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE L +CE L++I ++G+ K TEIQ +P +D++G ++TGSGKT F++P
Sbjct: 158 FEDLN--ICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIP-- 213
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL 515
++ +LK + + ++ISPTREL +Q + L I GG ++ L
Sbjct: 214 -ILQDLK-VNKQSFYALVISPTRELCIQISQNFQALGMNLLINICTIYGGVDIVTQSLNL 271
Query: 516 AKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR 575
AK N+IV+TPGR+LDHL NT F KNL+ L+ DEAD++L FE + +++ +LP R
Sbjct: 272 AKKPNVIVSTPGRILDHLNNTKGFNLKNLKYLVFDEADKLLSQDFESSINKLLLILPPNR 331
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
T LFS PV + V + + +TV+ L + Y+ P +
Sbjct: 332 ITFLFSATMTKNVAKLKKACLKN-PVKVEVSN--KYSTVSTLIETYIFLPLKYKYTYLSS 388
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
+++F ++C + + + + L +C+HGK Q +R ++ F + I
Sbjct: 389 LCFHYQTRNIIIFTNTCATAQKLNFFCRNLGLKSICLHGKLTQNQRLSSLNSFKVNKYNI 448
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEEL-GF 754
L+ T V ARGLD+ + ++ +D KEYIHRVGRTAR G SG ++ + ++ F
Sbjct: 449 LISTQVGARGLDLQDIKIVINFDICSC-KEYIHRVGRTARA-GRSGKSITFVTQYDVENF 506
Query: 755 LRYLKQAKIPLNEF 768
L KQ +++F
Sbjct: 507 LAIEKQLNKKIDKF 520
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 117/363 (32%), Positives = 186/363 (51%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY----- 459
E + AI G+T+ T +Q R IP +L+GRDL+ +A+TG+GKT F +P +E ++
Sbjct: 10 EALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGHP 69
Query: 460 --NLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAK 517
+ + PR +++++PTREL+ Q K + I GG + Q +A+
Sbjct: 70 DKSQRHGPRQPR-VLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNPQVQAMAR 128
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VA PGRLLD L +++ L++DEADR+LD+GF D+K+++ LP +RQ
Sbjct: 129 GVDVLVACPGRLLD-LAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQN 187
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS P I V T TV +EQ P+
Sbjct: 188 LLFSATFSKDITDLAGKLLHN-PERIEV--TPPNTTVERIEQRVFRLPASHKRALLAHLI 244
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V+VF + E L+ L + IHG + Q RT F E IL+
Sbjct: 245 TAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILV 304
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRY 757
TD+AARGLDI + +V ++ P+ ++Y+HR+GRT R G SG A+ ++ P+E L+
Sbjct: 305 ATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRA-GRSGEAISLVAPDEEKLLKS 363
Query: 758 LKQ 760
+++
Sbjct: 364 IER 366
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 120/363 (33%), Positives = 183/363 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKAI + G+ + IQ + IP +L G+D++ +A+TG+GKT F +P +EL+ + N
Sbjct: 13 LKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRAN 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHT---YGLIMGGASRQAEAQKLAKGINIIVA 524
+I++PTREL+ Q + +M Y H ++ GG + Q++ KG +I+VA
Sbjct: 73 QVRALILTPTRELAAQ---IQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVA 129
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+D L N + L+ L++DEADR+LD+GF D+ +I+ LLP++RQ +LFS
Sbjct: 130 TPGRLMD-LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATF 188
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
PV I V +T +EQ +
Sbjct: 189 STEIRELAKGLVNN-PVEISVSPAN--STARTVEQCIYPADVKKKPDMLVKLVKEGNWQQ 245
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
V+VF + LN L IHG + Q RT F E IL+ TD+AAR
Sbjct: 246 VLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAAR 305
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI---LRPEELGFLRYLKQA 761
G+DIP + +V ++ P ++Y+HR+GRT R G G A+ + + EL + L QA
Sbjct: 306 GIDIPQLPQVVNFELPKIAEDYVHRIGRTGRA-GEVGKAISLVSAIEAPELFAIERLTQA 364
Query: 762 KIP 764
+P
Sbjct: 365 LLP 367
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 119/358 (33%), Positives = 184/358 (51%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
EN L A+ +GFT T+IQA TIPPLL G+D++G A+TG+GKT AF +PA+ I
Sbjct: 24 ENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKK 83
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMK-YHHHTYGLIMGGASRQAEAQKLAKGINIIV 523
P+ +++++PTREL+MQ ++ K + GG S + Q+L +G ++V
Sbjct: 84 PQ----LMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVV 139
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
TPGRL+DHL+ L L+ ++DEAD +L++GF ED++ I++ +PK Q LFS
Sbjct: 140 GTPGRLMDHLRRKSLKL-DELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSAT 198
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P +I V K+ A + Q Y S
Sbjct: 199 MPPAIRKIANRFLKD-PEHIKVAAVKKAK--ANITQ-YAWKVSGITKMTALERIAEVVEY 254
Query: 644 XVMVFFSSCMSVKFH-HELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
M+ F + E L P + ++G Q +R Q + ++ IL+ TDV
Sbjct: 255 DAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVV 314
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
ARGLDIP + ++ YD P D + Y+HR+GRT R G G ++ +RP E+ +R+ ++
Sbjct: 315 ARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRA-GREGMSIAFVRPREMYSIRHYER 371
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 120/363 (33%), Positives = 183/363 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKAI + G+ + IQ + IP +L G+D++ +A+TG+GKT F +P +EL+ + N
Sbjct: 13 LKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRAN 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHT---YGLIMGGASRQAEAQKLAKGINIIVA 524
+I++PTREL+ Q + +M Y H ++ GG + Q++ KG +I+VA
Sbjct: 73 QVRALILTPTRELAAQ---IQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVA 129
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL+D L N + L+ L++DEADR+LD+GF D+ +I+ LLP++RQ +LFS
Sbjct: 130 TPGRLMD-LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATF 188
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
PV I V +T +EQ +
Sbjct: 189 STEIRELAKGLVNN-PVEISVSPAN--STARTVEQCIYPADVKKKPDMLVKLVKEGNWQQ 245
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
V+VF + LN L IHG + Q RT F E IL+ TD+AAR
Sbjct: 246 VLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAAR 305
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLI---LRPEELGFLRYLKQA 761
G+DIP + +V ++ P ++Y+HR+GRT R G G A+ + + EL + L QA
Sbjct: 306 GIDIPQLPQVVNFELPKIAEDYVHRIGRTGRA-GEVGKAISLVSAIEAPELFAIERLTQA 364
Query: 762 KIP 764
+P
Sbjct: 365 LLP 367
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 473 (171.6 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 127/406 (31%), Positives = 207/406 (50%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
+++ +F L G VC + + M T +QA IP +LEG D++G A+TG+GKTLAF
Sbjct: 86 MTTKKFSQL-G-VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 451 LVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
+P ++ L P G +I++PTREL+ Q L K +I+GG S
Sbjct: 144 AIP---ILQKLSVDPY-GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIH 199
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFL---YKNLQCLIIDEADRILDIGFEEDMKQI 567
+A++L++ +++VATPGRL D +++ P+ + +K +Q ++DEADR+L+ + + +K I
Sbjct: 200 QARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPI 259
Query: 568 VNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSE 627
+ ++RQT+L S P + +E+TV LEQ YVVCP
Sbjct: 260 FESISEKRQTLLLSATITNNINMLHRVSTRK-PYFFEDKGKDDESTVDRLEQKYVVCPVA 318
Query: 628 XXXXXXXXXXXXXXX----XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTT 683
VM+F +C + + + V +H + Q +R
Sbjct: 319 VKDAYLVYVVKNYSEKNPKSSVMIFAQTCRECQALAYMFEGLGFRVGSLHSQIPQKQRLA 378
Query: 684 TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
F + +++CTDVA+RGLDIP VD +V ++ P PK YIHRVGR+AR G G A
Sbjct: 379 ALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIHRVGRSARA-GRFGSA 437
Query: 744 LLILRPEELGFLRYLKQA-KIPLNEFEFSWSKISDIQLQLEKLISK 788
L + ++ L+ ++Q L+E + S ++ Q+ L++K
Sbjct: 438 LSFVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQV--LVAK 481
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 457 (165.9 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 111/342 (32%), Positives = 181/342 (52%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ + GF+ T IQA++ P ++GRD+V AKTGSGKTL +L+P + ++ R
Sbjct: 170 LREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRM 229
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTY---GLIMGGASRQAEAQKLAKGINIIVA 524
G I+++SPTREL+ Q + +E +K+ + + GGA + + + L +G +I+VA
Sbjct: 230 GPTILVLSPTRELATQ---IQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVA 286
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL D L+ L + + L++DEADR+LD+GFE +++IV +P +RQT++++
Sbjct: 287 TPGRLNDILEMRRISL-RQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATW 345
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGY-VVCPSEXXXXXXXXXXXXXXXX 643
P + + + E + Q VV P E
Sbjct: 346 PKGVRKIAADLLVN-PAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGS 404
Query: 644 XVMVFFSSCMSVKFHHELLNYI--DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
V++F C + + +L + IHG + Q +R QF + T +L+ TDV
Sbjct: 405 KVIIF---CSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDV 461
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
AARGLD+ + +V YD P+ ++Y+HR+GRT R G++G A
Sbjct: 462 AARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRA-GATGQA 502
Score = 38 (18.4 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 91 AELTVYPPESFTLSNPSKLTHNDGQSHL 118
A + Y PE TL P K +D +L
Sbjct: 7 ASVVRYAPEDHTLPKPWKGLIDDRTGYL 34
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 471 (170.9 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 118/383 (30%), Positives = 197/383 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+ I MGF + T+IQ + IP + G DL+ S+KTGSGKTLAF++PA++ + + + +
Sbjct: 13 MSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQRLSKNRALSKR 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
++I++PTREL+ Q F L+ + LI+GG + + + L K IVATPG
Sbjct: 73 DPRVVILTPTRELAKQVFSQLRLFTANTQYKAVLILGGENFNDQVKVLQKEPEFIVATPG 132
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR-RQTMLFSXXXXX 586
RL DHL F L+ LI+DEADR+LD+GF +++ QI R RQT+LFS
Sbjct: 133 RLADHLTQG-HFHLNGLELLILDEADRMLDLGFSKELTQINKAADHRKRQTLLFSATLDH 191
Query: 587 XXXXXXXXXXXXXPVYIGVD-DTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P I ++ E +A ++ Y+ +
Sbjct: 192 AQVNEFATELLTKPKRIAINAGHSEHVDIA--KRFYLADNLTQKEALLQHFLVTEKSQQI 249
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F ++ +LL +L + + G+ Q +R F + IL+ TD+A+RG
Sbjct: 250 IIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIMESFSKGQHKILVTTDLASRG 309
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPL 765
LD+ V ++ +D P +E++HR+GRT R G+ G A+ ++ P + +L LK + L
Sbjct: 310 LDLINVSHVINFDMPKHTEEFVHRIGRTGRA-GTKGDAISLVGPND--WLS-LKNVEAFL 365
Query: 766 NEFEFSWSKISDIQLQLEKLISK 788
+ + S++K+ I+++ + L K
Sbjct: 366 QQ-KISFTKVEGIKVKFKGLKPK 387
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 471 (170.9 bits), Expect = 3.6e-44, P = 3.6e-44
Identities = 118/383 (30%), Positives = 197/383 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+ I MGF + T+IQ + IP + G DL+ S+KTGSGKTLAF++PA++ + + + +
Sbjct: 13 MSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQRLSKNRALSKR 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
++I++PTREL+ Q F L+ + LI+GG + + + L K IVATPG
Sbjct: 73 DPRVVILTPTRELAKQVFSQLRLFTANTQYKAVLILGGENFNDQVKVLQKEPEFIVATPG 132
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR-RQTMLFSXXXXX 586
RL DHL F L+ LI+DEADR+LD+GF +++ QI R RQT+LFS
Sbjct: 133 RLADHLTQG-HFHLNGLELLILDEADRMLDLGFSKELTQINKAADHRKRQTLLFSATLDH 191
Query: 587 XXXXXXXXXXXXXPVYIGVD-DTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P I ++ E +A ++ Y+ +
Sbjct: 192 AQVNEFATELLTKPKRIAINAGHSEHVDIA--KRFYLADNLTQKEALLQHFLVTEKSQQI 249
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F ++ +LL +L + + G+ Q +R F + IL+ TD+A+RG
Sbjct: 250 IIFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIMESFSKGQHKILVTTDLASRG 309
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPL 765
LD+ V ++ +D P +E++HR+GRT R G+ G A+ ++ P + +L LK + L
Sbjct: 310 LDLINVSHVINFDMPKHTEEFVHRIGRTGRA-GTKGDAISLVGPND--WLS-LKNVEAFL 365
Query: 766 NEFEFSWSKISDIQLQLEKLISK 788
+ + S++K+ I+++ + L K
Sbjct: 366 QQ-KISFTKVEGIKVKFKGLKPK 387
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 470 (170.5 bits), Expect = 4.7e-44, P = 4.7e-44
Identities = 124/356 (34%), Positives = 180/356 (50%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN- 467
KAI MGF + T IQA+TIP L +D++G A+TG+GKT AF +P VE K P +
Sbjct: 16 KAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE-----KINPESP 70
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM---GGASRQAEAQKLAKGINIIVA 524
I+I+PTREL++Q V +EL K ++ GG + + L K +IIV
Sbjct: 71 NIQAIVIAPTRELAIQ---VSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVG 127
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLLDH+ N + + +++DEAD +L++GF ED++ I++ +P QT+LFS
Sbjct: 128 TPGRLLDHI-NRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATM 186
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P ++ V +E TV+ ++Q Y+
Sbjct: 187 PAPIKRIAERFMTN-PEHVKVK--AKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPEL 243
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+VF + V E LN IHG Q KR +F +L+ TDVAAR
Sbjct: 244 AIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAAR 303
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
GLDI V + +D P DP+ Y+HR+GRT R G +G A+ + P E LR ++Q
Sbjct: 304 GLDISGVTHVYNFDVPQDPESYVHRIGRTGRA-GKTGMAMTFITPREKDMLRAIEQ 358
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 470 (170.5 bits), Expect = 4.7e-44, P = 4.7e-44
Identities = 127/387 (32%), Positives = 195/387 (50%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T+F L + LKAI + G+ T IQA IPP LEGRD++G A+TG+GKT +F +P
Sbjct: 2 TKFSELN--LNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLP 59
Query: 454 AVELIYNLKF---MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
+ L+ + MPR+ +++ PTREL+ Q K+ T L++GG S +
Sbjct: 60 MITLLARGRARARMPRS----LVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKE 115
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
+ + +G+++++ATPGRLLDH + + L +Q +++DEADR+LD+GF D+++I +L
Sbjct: 116 QDALIDRGVDVLIATPGRLLDHFERG-KLLLTGVQIMVVDEADRMLDMGFIPDIERIFSL 174
Query: 571 LPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAG-LEQGYVVCP---- 625
P RQT+ FS P I V +AT + +EQG V+
Sbjct: 175 TPFTRQTLFFSATMAPEIERITNTFLSA-PARIEV---ARQATASETIEQGVVLFKGSRR 230
Query: 626 ----SEXXXXXXXXXXXXXXX-XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMK 680
SE ++F + V + L IHG Q +
Sbjct: 231 DREASEKRAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQ 290
Query: 681 RTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSS 740
RT T F + +L+ +DVAARGLD+P+V + +D P P++Y+HR+GRT R G
Sbjct: 291 RTRTLDGFREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRA-GRD 349
Query: 741 GHALLILRPEE---LGFLRYLKQAKIP 764
G A+ + P + L + L Q IP
Sbjct: 350 GKAITLCIPRDEKALDAIEKLIQKDIP 376
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 468 (169.8 bits), Expect = 7.8e-44, P = 7.8e-44
Identities = 125/384 (32%), Positives = 191/384 (49%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+K + +G T IQ + IP +L G+D +G+AKTGSGKT AF +P +E L P +
Sbjct: 19 VKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILE---RLSEEPVS 75
Query: 468 GTGIIIISPTRELSMQT---FGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+++ +PT EL+ Q F V + M ++ GG + E+QKL + +I+VA
Sbjct: 76 HFALVL-TPTHELAYQISEQFLVAGQAMGVR---VCVVSGGTDQMVESQKLMQRPHIVVA 131
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
PGRL DHL F + NL+ L++DEADR+L+ F+E + I LPK RQ + FS
Sbjct: 132 MPGRLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFSATM 191
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX-- 642
D + ATV L+Q Y++C
Sbjct: 192 KDFIKESSIFPIASDCFEWSQDS--DVATVETLDQRYLLCADYDRDMVLIEALRKYREEN 249
Query: 643 --XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
VM+F ++ + L +++ +C+HG +Q +R +F + + L+ TD
Sbjct: 250 ENANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATD 309
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILR-PEELGFLRYLK 759
VAARGLDIP+V+ ++ + P PKEYIHRVGRTAR G G ++ I R P +L L ++
Sbjct: 310 VAARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARA-GRKGMSISIFRFPRDLELLAAIE 368
Query: 760 QA-KIPLNEFEFSWSKISDIQLQL 782
+ L E + I +Q+
Sbjct: 369 EEINTKLTEHPIDQRMVERIFMQV 392
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 468 (169.8 bits), Expect = 7.8e-44, P = 7.8e-44
Identities = 123/363 (33%), Positives = 194/363 (53%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+N L+AIA +GFT+ T IQA+ P L+GRDL+G A+TGSGKTLA+L+PA L++ +
Sbjct: 174 DNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA--LVH-VSAQ 230
Query: 465 PR----NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQKLA 516
PR +G ++I++PTREL++Q + +E K+ + G+ I GGA + + + L
Sbjct: 231 PRLGQDDGPIVLILAPTRELAVQ---IQEESRKFGLRS-GVRSTCIYGGAPKGPQIRDLR 286
Query: 517 KGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQ 576
+G+ I++ATPGRL+D L+ L K + L++DEADR+LD+GFE +++IV+ + RQ
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNL-KRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 345
Query: 577 TMLFSXXXXXXXXXXXXXXXXX-XPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXX 635
T+L+S IG D K ++ + + +V E
Sbjct: 346 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIE--IVPTPEKYNRLLTL 403
Query: 636 XXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGI 695
+++F + L P + IHG + Q +R +F + + I
Sbjct: 404 LKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 696 LLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
+ TDVAARGLD+ + +V YD P+ ++YIHR+GRT R G+ G A + F
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRA-GAKGMAFTFFTHDNAKFA 522
Query: 756 RYL 758
R L
Sbjct: 523 REL 525
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 467 (169.5 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 121/386 (31%), Positives = 204/386 (52%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
+S + SS F +L K ++ +K ++ +G+ +MT IQA+T+P LL+G+D++G AKTGS
Sbjct: 1 MSTNTTTSSLAFSSLSLK--QDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGS 58
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM- 503
GKT AF + + + KF ++ ++I PTREL+ Q L++L + H+ L +
Sbjct: 59 GKTAAFGLALLNKLEVKKFRIQS----MVICPTRELADQVAKELRKLARGIHNIKILTLC 114
Query: 504 GGASRQAEAQKLAKGINIIVATPGRLLDH-LQNTPEFLYKNLQCLIIDEADRILDIGFEE 562
GG + L G ++IV TPGRL +H ++ T + NL L++DEADR+L++GF+
Sbjct: 115 GGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIKGTLQL--DNLNLLVLDEADRMLEMGFQA 172
Query: 563 DMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV 622
+ IV P RQT+LFS PV + + +++++T++ ++ +
Sbjct: 173 ALDNIVGRTPLDRQTLLFSATFPDQIKSISESIMTD-PVMVKIASSEDQSTIS--QKFFK 229
Query: 623 VCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRT 682
V + +F ++ + + L++ V+ +HG +Q R
Sbjct: 230 VGNDDDRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRD 289
Query: 683 TTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGH 742
T +F N IL+ TDVAARGLDI ++D ++ Y D + ++HR+GRT R GS+G
Sbjct: 290 QTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRA-GSTGI 348
Query: 743 ALLILRPEE---LGFLR-YLKQAKIP 764
A + +E +G L YL+ P
Sbjct: 349 AYSLFSDKESYKVGLLEDYLEAVITP 374
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 467 (169.5 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 121/386 (31%), Positives = 204/386 (52%)
Query: 385 LSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGS 444
+S + SS F +L K ++ +K ++ +G+ +MT IQA+T+P LL+G+D++G AKTGS
Sbjct: 1 MSTNTTTSSLAFSSLSLK--QDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGS 58
Query: 445 GKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM- 503
GKT AF + + + KF ++ ++I PTREL+ Q L++L + H+ L +
Sbjct: 59 GKTAAFGLALLNKLEVKKFRIQS----MVICPTRELADQVAKELRKLARGIHNIKILTLC 114
Query: 504 GGASRQAEAQKLAKGINIIVATPGRLLDH-LQNTPEFLYKNLQCLIIDEADRILDIGFEE 562
GG + L G ++IV TPGRL +H ++ T + NL L++DEADR+L++GF+
Sbjct: 115 GGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIKGTLQL--DNLNLLVLDEADRMLEMGFQA 172
Query: 563 DMKQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYV 622
+ IV P RQT+LFS PV + + +++++T++ ++ +
Sbjct: 173 ALDNIVGRTPLDRQTLLFSATFPDQIKSISESIMTD-PVMVKIASSEDQSTIS--QKFFK 229
Query: 623 VCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRT 682
V + +F ++ + + L++ V+ +HG +Q R
Sbjct: 230 VGNDDDRLDALRLLLLGNQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRD 289
Query: 683 TTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGH 742
T +F N IL+ TDVAARGLDI ++D ++ Y D + ++HR+GRT R GS+G
Sbjct: 290 QTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRA-GSTGI 348
Query: 743 ALLILRPEE---LGFLR-YLKQAKIP 764
A + +E +G L YL+ P
Sbjct: 349 AYSLFSDKESYKVGLLEDYLEAVITP 374
>POMBASE|SPBC21H7.04 [details] [associations]
symbol:dbp7 "ATP-dependent RNA helicase Dbp7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC21H7.04
GO:GO:0005524 GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K14806
HOGENOM:HOG000268799 OrthoDB:EOG4W6S47 PIR:T39930
RefSeq:NP_595929.1 ProteinModelPortal:O60173 STRING:O60173
EnsemblFungi:SPBC21H7.04.1 GeneID:2540518 KEGG:spo:SPBC21H7.04
NextBio:20801645 Uniprot:O60173
Length = 709
Score = 281 (104.0 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 62/166 (37%), Positives = 102/166 (61%)
Query: 414 MGFTKMTEIQARTIPPLL--EGRDLVGSAKTGSGKTLAFLVPAVELIYNL-KFMPRNGTG 470
M + T IQ+ +P LL + +D A+TGSGKTLA+L+P V+ + L K + +G
Sbjct: 157 MNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPKNLHTRTSG 216
Query: 471 I--IIISPTRELSMQTFGVLKELMK--YHHHTYGL-IMGGASRQAEAQKLAKGINIIVAT 525
I +I++PTREL Q + V +L H ++GG +++E ++ KG+NI++ T
Sbjct: 217 IYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIGT 276
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
PGRL DHL+NT ++ +++DE DR++D+GFEE + +I++ L
Sbjct: 277 PGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYL 322
Score = 218 (81.8 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 46/93 (49%), Positives = 63/93 (67%)
Query: 672 IHGKQKQMKRTTTFFQFCNAE-TG--ILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIH 728
+HG Q RT+T F ++E +G ILLCTDVAARGLD+P VD +VQYD P +Y+H
Sbjct: 473 LHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLH 532
Query: 729 RVGRTARGEGSSGHALLILRPEELGFLRYLKQA 761
R+GRTAR G +G A++ L P+E ++ LK +
Sbjct: 533 RIGRTARA-GHNGAAIMFLLPKESEYINLLKSS 564
Score = 86 (35.3 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 760 QAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSH--HLKQIFD 817
Q K N+++ + ++ QL+LE+ I +N + K AF +YVRAY +H + IF+
Sbjct: 586 QGKTNTNDWQ---DRATEWQLELERFILENEPMRNIAKRAFTSYVRAYATHLSSERSIFN 642
Query: 818 IDTMDLGKDSK 828
+ + LG +K
Sbjct: 643 MRDLHLGHIAK 653
Score = 44 (20.5 bits), Expect = 1.6e-43, Sum P(4) = 1.6e-43
Identities = 23/97 (23%), Positives = 35/97 (36%)
Query: 571 LPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIG---VDDTKEEATVAG--LEQGYVVCP 625
+P R+ TML S +Y+ V++T + + A L Q YVV P
Sbjct: 335 IPSRKVTMLCSATMKDTVKRLSDSALKDA-LYLKSSIVEETNDGYSQAPEQLLQRYVVVP 393
Query: 626 SEXXXXXXXXXXXXXXXXX--VMVFFSSCMSVKFHHE 660
+ +++F S SV FH E
Sbjct: 394 PKLRLVSLVALLRSHVRSYKKIIIFLSCSDSVDFHFE 430
>ASPGD|ASPL0000028276 [details] [associations]
symbol:AN5623 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:BN001305
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268799
ProteinModelPortal:C8VFX5 EnsemblFungi:CADANIAT00003447 OMA:STIGKMG
Uniprot:C8VFX5
Length = 567
Score = 465 (168.7 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 138/437 (31%), Positives = 215/437 (49%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR-DLVGSAKTGSGKTLAFLVPA 454
+ ++ GK+ + L+A+ +GF M+ +Q R + L R D + AKTG+GKT+AFL+PA
Sbjct: 11 YSSMAGKLDQKLLQALNVLGFEYMSPVQQRVLTELPTWRSDCLVQAKTGTGKTVAFLLPA 70
Query: 455 VELIYNLKFMPRNG-TGIIIISPTRELSMQTFGVLKELMKYHHHTYG--LIMGGASRQAE 511
+ + + R G I+II+PTREL+ Q EL + +GG +R +
Sbjct: 71 LHCLIQGQSQVRRGQVAILIITPTRELAQQIAKSCDELTSQLSRPLECHIAVGGTARASA 130
Query: 512 AQKLAKGI-NIIVATPGRLLDHLQN--TPEFLYKNLQCLIIDEADRILDIGFEEDMKQIV 568
+ G +I+VATPGRL D+L T E L K++Q L++DEAD +L+ GF D+KQI+
Sbjct: 131 HSRFMNGDPSILVATPGRLKDYLSESETAEKL-KDIQTLVLDEADTMLETGFLADVKQIL 189
Query: 569 NLLPKRR---QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCP 625
L+P + Q M FS I D E T + Q YV+ P
Sbjct: 190 KLIPSKSTGWQGMCFSATLPPKVKDVVSVVLNPGYTSISTVDKNEPPTHERVPQYYVLMP 249
Query: 626 SEXXXXXXXXXXXXXXX---XXVMVFFSSCMSVKFHHELL-NYID-LPVMCIHGKQKQMK 680
S ++VF + V H N + L V IH + Q
Sbjct: 250 SVAETFTTLSSLLAHESKKNTKIIVFGVTANMVALSHSAFANGLTPLKVFEIHSRLSQSA 309
Query: 681 RTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSS 740
RT T QF A+ GIL +DV RG+D P VD +VQ P + ++Y+HRVGRTAR G+
Sbjct: 310 RTRTTSQFKEADAGILFASDVIGRGMDFPNVDLVVQVGLPSNAEQYVHRVGRTARA-GND 368
Query: 741 GHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNYFLNMSGKE-A 799
G A+++L E FL+ + +P+ + S +++ + Y ++ + K+ A
Sbjct: 369 GRAVILLTESESFFLKANRH--LPIQPHPDASSILANATSCSPAVTQAMYAVDETTKQRA 426
Query: 800 FKAYVRAY-DSHHLKQI 815
+ +Y+ + S +KQ+
Sbjct: 427 YSSYIGFFAGSGLMKQL 443
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 484 (175.4 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 132/392 (33%), Positives = 190/392 (48%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+A +G+ K T IQA IP L GRDL SA TGSGKT AF +P +E L F P+
Sbjct: 179 LRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE---RLLFRPKR 235
Query: 468 --GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
T ++I++PTREL++Q +++ L ++ GLI+GG S + + L +I+VAT
Sbjct: 236 VFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMPDIVVAT 295
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGR++DHL+N+ +L LI+DEADR+L GF ++ ++V L PKRRQTMLFS
Sbjct: 296 PGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTMLFSATMT 355
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P+ + D + E + E
Sbjct: 356 EEVKELVKLSLNK-PLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTRTFKSK 414
Query: 646 MVFFSSCMSVKFHHELL-NYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
++ FS ++L L +HG Q +R + F E L+ TDVAAR
Sbjct: 415 VIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAAR 474
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRY------- 757
GLDI V ++ Y P + Y+HRVGRTAR G G+A+ + + L+
Sbjct: 475 GLDIIGVQTVINYACPREIDSYVHRVGRTARA-GREGYAVTFVTDSDRSLLKVIAKKVGS 533
Query: 758 -LKQAKIPLNEFEFSWSKISD-IQLQLEKLIS 787
LK IP WS+I D ++ Q +IS
Sbjct: 534 KLKSRVIPEQSI-VKWSQIIDEMEDQYSAVIS 564
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 464 (168.4 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 118/361 (32%), Positives = 190/361 (52%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L +I +G+TK T IQ IP + G+D++ SA TG+GKT AFL+P + +L PR
Sbjct: 25 LASINKIGYTKPTSIQELVIPQAMVGKDVLASAPTGTGKTAAFLLPIAQ---HLLDYPRT 81
Query: 468 GTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
G ++I++PTREL++Q ++L + G+I GG + + A L +I+VA
Sbjct: 82 KPGFPRVLILTPTRELAIQIGEDSEQLTELTKIKTGVITGGVNYGSHADILTSTTDILVA 141
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL++++N +F + ++ L++DEADR+LD+GF E + +IV R+QTMLFS
Sbjct: 142 TPGRLLEYIENE-QFDAREIEILVLDEADRMLDLGFSETINRIVAEARWRKQTMLFSATL 200
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQG-YVVCPSEXXXXXXXXXXXXXXXX 643
PV++ +++E V + Q ++ +
Sbjct: 201 ESPGVQLFAEEVLNEPVFLESKPSRKEKAV--IHQWLHLADDANHKLNLLVNTLKQEGVE 258
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
+VF + +V++ L +LP + + GK Q KR +F E +L+ TDVAA
Sbjct: 259 RTVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAA 318
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL----RYLK 759
RGLDI + ++ +D P YIHR+GRT R G G A+ ++ ++G + RY K
Sbjct: 319 RGLDIDDISHVINFDMPRKVDIYIHRIGRTGRA-GKKGTAISLVEAHDMGVIGKIERYTK 377
Query: 760 Q 760
+
Sbjct: 378 E 378
>UNIPROTKB|F1SV16 [details] [associations]
symbol:F1SV16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000016375 OMA:SAREVPM Uniprot:F1SV16
Length = 301
Score = 462 (167.7 bits), Expect = 3.6e-43, P = 3.6e-43
Identities = 95/188 (50%), Positives = 134/188 (71%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
T+F L + + TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP
Sbjct: 69 TRFSDLP--LSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVP 126
Query: 454 AVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQ 513
+E +Y L++ +G G++IISPTREL+ QTF VL+++ K H + GLI+GG + EA+
Sbjct: 127 VLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAE 186
Query: 514 KLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK 573
++ INI+V TPGRLL H+ T F NLQ L++DEADRILD+GF + M I+ LPK
Sbjct: 187 RI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPK 245
Query: 574 RRQTMLFS 581
+RQT+LFS
Sbjct: 246 KRQTLLFS 253
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 462 (167.7 bits), Expect = 3.6e-43, P = 3.6e-43
Identities = 122/372 (32%), Positives = 188/372 (50%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ EN LKA+ + G+T T IQ IP +L G D+ G A+TG+GKT AF++P ++ + +
Sbjct: 11 LAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQRLSTGR 70
Query: 463 FMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINII 522
R +I+ PTREL+ Q ++ KY T L++GG S + + L +G++++
Sbjct: 71 ARARMPR-CLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVDVL 129
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
+ATPGRL+D + L ++ LIIDEADR+LD+GF D+++I LP RQT+LFS
Sbjct: 130 IATPGRLMDQFDRG-KLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLLFSA 188
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
P I V T+ T + Q V P+
Sbjct: 189 TFPTDIQRLAKTFQKD-PKKIEV--TRPAQTAETISQFVVKLPTNDGKARRTALRRVIEA 245
Query: 643 XXV---MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCT 699
V +VF + + V L IHG Q R+ T +F + + +L+ +
Sbjct: 246 TNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVAS 305
Query: 700 DVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE---LGFLR 756
DVAARGLDIP V + + PP ++Y+HR+GRT R G +G + ++ P + GF+
Sbjct: 306 DVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRA-GRTGESYTVVTPADDKSWGFV- 363
Query: 757 YLKQAKIPLNEF 768
+K K + EF
Sbjct: 364 -VKMIKKDVPEF 374
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 462 (167.7 bits), Expect = 3.6e-43, P = 3.6e-43
Identities = 117/360 (32%), Positives = 181/360 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+AI +MGF++ T++QA IP L+GRD++ SA TG+GKT AF++PA++ Y L F PR
Sbjct: 15 LEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPALQ--YLLDF-PRR 71
Query: 468 GTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
G I+I++PTREL+MQ + L K I GG Q A LA +I+VA
Sbjct: 72 KAGPARILILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHADILATTQDIVVA 131
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL+++ + F + ++ LI+DEADR+LD+GF + ++ R+QT+LFS
Sbjct: 132 TPGRLLEYI-DAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRWRKQTLLFSATL 190
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P ++ + + E + Q Y
Sbjct: 191 EGRGVEGFTADLLKDPAHVDAEPPRRERKK--ISQWYHRADDMPHKVELLKKILTEQAER 248
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+VF + + L +P I G+ Q +R +F + ILL TDVAAR
Sbjct: 249 SIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAAR 308
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL----RYLKQ 760
G+D+P + ++ +D P Y+HR+GRT R G G A+ ++ + + RY+K+
Sbjct: 309 GIDVPDISHVINFDLPRSADVYLHRIGRTGRA-GKKGIAISLVEAHDQPMMARVERYIKE 367
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 462 (167.7 bits), Expect = 3.6e-43, P = 3.6e-43
Identities = 117/360 (32%), Positives = 181/360 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+AI +MGF++ T++QA IP L+GRD++ SA TG+GKT AF++PA++ Y L F PR
Sbjct: 15 LEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPALQ--YLLDF-PRR 71
Query: 468 GTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
G I+I++PTREL+MQ + L K I GG Q A LA +I+VA
Sbjct: 72 KAGPARILILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHADILATTQDIVVA 131
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRLL+++ + F + ++ LI+DEADR+LD+GF + ++ R+QT+LFS
Sbjct: 132 TPGRLLEYI-DAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRWRKQTLLFSATL 190
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P ++ + + E + Q Y
Sbjct: 191 EGRGVEGFTADLLKDPAHVDAEPPRRERKK--ISQWYHRADDMPHKVELLKKILTEQAER 248
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+VF + + L +P I G+ Q +R +F + ILL TDVAAR
Sbjct: 249 SIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLATDVAAR 308
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL----RYLKQ 760
G+D+P + ++ +D P Y+HR+GRT R G G A+ ++ + + RY+K+
Sbjct: 309 GIDVPDISHVINFDLPRSADVYLHRIGRTGRA-GKKGIAISLVEAHDQPMMARVERYIKE 367
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 460 (167.0 bits), Expect = 5.9e-43, P = 5.9e-43
Identities = 113/363 (31%), Positives = 186/363 (51%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY----- 459
E ++AI G+T+ T +Q R IP +L+GRDL+ +A+TG+GKT F +P +E ++
Sbjct: 10 EALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGVP 69
Query: 460 --NLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAK 517
+ + PR +++++PTREL+ Q K + I GG + Q +++
Sbjct: 70 DKSQRHGPRQPR-VLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNPQVQAMSR 128
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VA PGRLLD L +++ L++DEADR+LD+GF D+K+++ LP +RQ
Sbjct: 129 GVDVLVACPGRLLD-LAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQN 187
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS P I V T TV +EQ +
Sbjct: 188 LLFSATFSNDITSLAGKLLHN-PERIEV--TPPNTTVERIEQRVFRLAANHKRSLLAHLI 244
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V+VF + E L+ L + IHG + Q RT F + I++
Sbjct: 245 TVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMV 304
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRY 757
TD+AARGLDI + +V ++ P+ ++Y+HR+GRT R G SG A+ ++ P+E L+
Sbjct: 305 ATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRA-GRSGEAISLVAPDEEKLLKS 363
Query: 758 LKQ 760
+++
Sbjct: 364 IER 366
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 459 (166.6 bits), Expect = 7.6e-43, P = 7.6e-43
Identities = 121/376 (32%), Positives = 192/376 (51%)
Query: 390 ILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 449
I+S Q L G++ + KA G+T T IQ + IP +++GRD+VG A+TG+GKTLA
Sbjct: 5 IMSDFQSLGLTGRILTSLTKA----GYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLA 60
Query: 450 FLVPAVE-LIYNLKFMPRNGTGIIIISPTRELSMQ---TFGVLKELMKYHHHTYGLIMGG 505
F P ++ L N P GT +++++PTREL+ Q +FG + ++ GG
Sbjct: 61 FAAPILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLR---VVMVCGG 117
Query: 506 ASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMK 565
A + ++L +G +I+VATPGRL+D ++ L K ++ LI+DEAD++LD+GF ++
Sbjct: 118 AKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDK-VETLILDEADQMLDLGFIHALR 176
Query: 566 QIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAG-LEQGYVVC 624
I +P +RQT+ FS P + V AT AG +EQ
Sbjct: 177 AIAKNVPSKRQTLFFSATMPKAVESLAATFLRN-PAEVSV---APPATTAGRIEQRVCFV 232
Query: 625 PSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTT 684
+VF + + L D+ + IHG + Q +R
Sbjct: 233 EQPEKASLLIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKA 292
Query: 685 FFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
F IL+ TD+AARG+ + A+ ++ YD PD P++++HR+GRTAR G+SG A+
Sbjct: 293 LEAFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARA-GNSGVAI 351
Query: 745 LILRPEELGFLRYLKQ 760
+E LR +++
Sbjct: 352 SFCSRDERPTLRAIEK 367
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 459 (166.6 bits), Expect = 7.6e-43, P = 7.6e-43
Identities = 114/383 (29%), Positives = 199/383 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP-R 466
LKAI + + + TEIQ ++IP +L D++ A+TG+GKT AF +P ++ + +++ P +
Sbjct: 17 LKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQLISVQ--PCK 74
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
++++PTREL+ Q ++ T G+ GG S + + +L G++I++ATP
Sbjct: 75 PELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATP 134
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLD L+ T N++ L+ DEADR+LD+GF+E++ QI LPK +QT+LFS
Sbjct: 135 GRLLDLLR-TESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSATFAD 193
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P + +D+ + A +EQ ++ V+
Sbjct: 194 DIYKMSKNILVE-PKMVEIDEKNKAAD--DVEQLVYGVDADRKRELTSFLIGSRNWKQVL 250
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
VF + + + + + IHG + Q R +F + L+ TDVAARG+
Sbjct: 251 VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGI 310
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLN 766
DI + ++ Y+ P + ++Y+HR+GRTAR G+SG A+ ++ P E L +++ + +
Sbjct: 311 DIKGLSHVINYELPYNAEDYVHRIGRTARA-GNSGLAVSLVSPGEEWLLTAIEEL-LDIQ 368
Query: 767 EFEFSWSKISDIQLQLEKLISKN 789
+ W + +L L K+ + N
Sbjct: 369 LLQ-QW--LPGYELDLTKIANSN 388
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 459 (166.6 bits), Expect = 7.6e-43, P = 7.6e-43
Identities = 114/383 (29%), Positives = 199/383 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP-R 466
LKAI + + + TEIQ ++IP +L D++ A+TG+GKT AF +P ++ + +++ P +
Sbjct: 17 LKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQLISVQ--PCK 74
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
++++PTREL+ Q ++ T G+ GG S + + +L G++I++ATP
Sbjct: 75 PELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVGVDILIATP 134
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLD L+ T N++ L+ DEADR+LD+GF+E++ QI LPK +QT+LFS
Sbjct: 135 GRLLDLLR-TESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSATFAD 193
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P + +D+ + A +EQ ++ V+
Sbjct: 194 DIYKMSKNILVE-PKMVEIDEKNKAAD--DVEQLVYGVDADRKRELTSFLIGSRNWKQVL 250
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
VF + + + + + IHG + Q R +F + L+ TDVAARG+
Sbjct: 251 VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGI 310
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLN 766
DI + ++ Y+ P + ++Y+HR+GRTAR G+SG A+ ++ P E L +++ + +
Sbjct: 311 DIKGLSHVINYELPYNAEDYVHRIGRTARA-GNSGLAVSLVSPGEEWLLTAIEEL-LDIQ 368
Query: 767 EFEFSWSKISDIQLQLEKLISKN 789
+ W + +L L K+ + N
Sbjct: 369 LLQ-QW--LPGYELDLTKIANSN 388
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 328 (120.5 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
Identities = 70/176 (39%), Positives = 113/176 (64%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMP- 465
L+A+A+ G+ + T IQ + IP +LEGRDL+ SA+TG+GKT F +P ++ LI
Sbjct: 13 LRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKG 72
Query: 466 RNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
R +I++PTREL+ Q +++ KY + ++ GG S + KL G++++VAT
Sbjct: 73 RRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
PGRLLD L++ ++ L++DEADR+LD+GF D+++++ LP +RQ +LFS
Sbjct: 133 PGRLLD-LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFS 187
Score = 178 (67.7 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
Identities = 40/116 (34%), Positives = 65/116 (56%)
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
V+VF + E LN + IHG + Q RT F + + +L+ TD+AAR
Sbjct: 248 VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAAR 307
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
GLDI + +V Y+ P+ P++Y+HR+GRT R ++G AL ++ +E LR +++
Sbjct: 308 GLDIEELPHVVNYELPNVPEDYVHRIGRTGRA-AATGEALSLVCVDEHKLLRDIEK 362
Score = 39 (18.8 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 707 DIPAVDWIVQYDP-PDDPKEYIHRVGRTARGEGSSG 741
+IP + I Y+P P E I GR RG G G
Sbjct: 367 EIPRIA-IPGYEPDPSIKAEPIQN-GRQQRGGGGRG 400
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 456 (165.6 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 116/345 (33%), Positives = 178/345 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L + ++G+ MT +QA +P +L G+D+ AKTGSGKT AF + ++ I F
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQ--- 71
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM-GGASRQAEAQKLAKGINIIVATP 526
T +++ PTREL+ Q G L+ L ++ +T L + GG + L +IIVATP
Sbjct: 72 -TQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVATP 130
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLDHLQ L L L++DEADR+LD+GF + + ++ P RQT+LFS
Sbjct: 131 GRLLDHLQKGTVSL-DALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSATWPE 189
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P+ I +D T + +EQ + S+ +
Sbjct: 190 AIAAISGRVQRD-PLAIEIDSTD---ALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCV 245
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
VF ++ + + LN + + +HG +Q R T +F N +L+ TDVAARGL
Sbjct: 246 VFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGL 305
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
DI +++ +V ++ DP+ ++HR+GRTAR G+SG A+ PEE
Sbjct: 306 DIKSLELVVNFELAWDPEVHVHRIGRTARA-GNSGLAISFCAPEE 349
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 455 (165.2 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 128/416 (30%), Positives = 201/416 (48%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+AI D+G+ T IQA TIP L+ G D+VG A+TG+GKT AF +P + I +P+
Sbjct: 25 LRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQ- 83
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-IMGGASRQAEAQKLAKGINIIVATP 526
+++ PTREL++Q Y L I GG+S + L +G ++V TP
Sbjct: 84 ---ALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGTP 140
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GR++DHL+ L + + L++DEAD +L +GF +D+++I++ P+ +Q LFS
Sbjct: 141 GRMIDHLERATLDLSR-VDFLVLDEADEMLTMGFADDVERILSETPEYKQVALFSATMPP 199
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVA-GLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P + K + VA + Q Y+ + +
Sbjct: 200 AIRKLSAKYLHD-PFEV---TCKAKTAVAENISQSYIQVARKMDALTRVLEVEPFEA--M 253
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
+VF + + + E L I G Q +R T + + IL+ TDVAARG
Sbjct: 254 IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARG 313
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-KIP 764
LD+ + ++ YD P D + Y+HR+GRT R G SG AL+ + P EL L+ +++A +
Sbjct: 314 LDVERISHVLNYDIPHDTESYVHRIGRTGRA-GRSGAALIFVSPRELHLLKAIEKATRQT 372
Query: 765 LNEFEFSWSKISDIQLQ-LEKLI-SKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDI 818
L E + + D+ Q + K S L G E F+ V Y+ H + DI
Sbjct: 373 LTEAQLP--TVEDVNTQRVAKFADSITNALGGPGIELFRRLVEEYEREHDVPMADI 426
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 454 (164.9 bits), Expect = 2.7e-42, P = 2.7e-42
Identities = 121/378 (32%), Positives = 197/378 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE L G E L+AI + G+ + T +Q + IP +L+ RD++ +A+TG+GKT F +P +
Sbjct: 12 FEVL-GLSAE-LLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
Query: 456 ELIY-NLKFMPRNGTGII---IISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
+ ++ + + R+ +I I++PTREL++Q F ++ KY ++ GG S + +
Sbjct: 70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
L +G++I+VATPGRLLD L N ++ ++DEADR+LD+GF D+++I+ LL
Sbjct: 130 INHLRRGVDILVATPGRLLD-LVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLL 188
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
P+ RQ +LFS P I V + A + +VV P +
Sbjct: 189 PESRQNLLFSATFSKEIKELTDKLLHS-PALIEV--ARRNTAAARIT--HVVHPVDRQRK 243
Query: 632 XXXXXXXXXXXX--XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
V+VF + + L L IHG + Q R QF
Sbjct: 244 RELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFK 303
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
+ +L+ TDVAARGLDI + ++ ++ PD K+Y+HRVGRT R + G A+ ++
Sbjct: 304 QGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRAS-NDGVAISLVSG 362
Query: 750 EELGFLRYLK---QAKIP 764
+E+ LR ++ Q+K+P
Sbjct: 363 DEVRLLRDIEKLLQSKMP 380
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 454 (164.9 bits), Expect = 2.7e-42, P = 2.7e-42
Identities = 121/378 (32%), Positives = 197/378 (52%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
FE L G E L+AI + G+ + T +Q + IP +L+ RD++ +A+TG+GKT F +P +
Sbjct: 12 FEVL-GLSAE-LLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLL 69
Query: 456 ELIY-NLKFMPRNGTGII---IISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
+ ++ + + R+ +I I++PTREL++Q F ++ KY ++ GG S + +
Sbjct: 70 QRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
L +G++I+VATPGRLLD L N ++ ++DEADR+LD+GF D+++I+ LL
Sbjct: 130 INHLRRGVDILVATPGRLLD-LVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLL 188
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
P+ RQ +LFS P I V + A + +VV P +
Sbjct: 189 PESRQNLLFSATFSKEIKELTDKLLHS-PALIEV--ARRNTAAARIT--HVVHPVDRQRK 243
Query: 632 XXXXXXXXXXXX--XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
V+VF + + L L IHG + Q R QF
Sbjct: 244 RELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFK 303
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
+ +L+ TDVAARGLDI + ++ ++ PD K+Y+HRVGRT R + G A+ ++
Sbjct: 304 QGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRAS-NDGVAISLVSG 362
Query: 750 EELGFLRYLK---QAKIP 764
+E+ LR ++ Q+K+P
Sbjct: 363 DEVRLLRDIEKLLQSKMP 380
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 454 (164.9 bits), Expect = 2.7e-42, P = 2.7e-42
Identities = 120/368 (32%), Positives = 185/368 (50%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA-VELIYNLKF 463
E ++ +AD GF+ T IQ +T+P L G+D+ G A+TG+GKT AFL+ +L+ + +
Sbjct: 10 EQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTKLLRSGRG 69
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIV 523
R II++PTREL +Q + L + T I GG + L +G +++V
Sbjct: 70 GERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALKEGADVVV 129
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPK--RRQTMLFS 581
TPGRL+D+L+ L K ++ L+IDEADR+ D+GF D++ I+ LP +RQ ++FS
Sbjct: 130 GTPGRLIDYLKQKVYSL-KEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKRQNLMFS 188
Query: 582 XXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXX 641
P + V T E+ T +EQ +
Sbjct: 189 ATLNQRVMELAYEFMNV-PEKVAV--TPEQMTAERVEQVLYHVGRKEKFPLLLGLLRKEG 245
Query: 642 XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
M+F ++ +F E LN D P I G +Q KR F + + I++ TDV
Sbjct: 246 MERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATDV 305
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLR----Y 757
A+RGL I V ++ YD P D ++Y+HR+GRTAR G+ G A+ + + L Y
Sbjct: 306 ASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARA-GAEGKAISMADEDGAFHLEAIHEY 364
Query: 758 LKQAKIPL 765
+K KIP+
Sbjct: 365 IKD-KIPV 371
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 474 (171.9 bits), Expect = 3.7e-42, P = 3.7e-42
Identities = 123/350 (35%), Positives = 187/350 (53%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
K I G+ T IQ +TIP +L+G+D+V A+TGSGKT AFLVP E LK P+
Sbjct: 91 KGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFE---KLK-APQAQ 146
Query: 469 TGI--IIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
TG +I++PTREL++QT KEL K+ LI+GG S + L + +II+ TP
Sbjct: 147 TGARALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTP 206
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+ H+ ++++ ++ DEADR+ ++GF E +++I+ LP RQT+LFS
Sbjct: 207 GRLM-HVIQEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQTLLFSATLPK 265
Query: 587 XXXXXXXXXXXXXPVYIGVD-DTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
PV I +D DTK + L + +
Sbjct: 266 LIVEFARAGLTE-PVLIRLDVDTKLSEQLK-LSFFSLRLDDKPALLLHLLRNVVKPQEQT 323
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
+VF ++ V++ ELL+ + CI+ Q R + +F + + +LL TDVAARG
Sbjct: 324 VVFVATKHHVEYLKELLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAARG 383
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
+DIP +D ++ Y+ P PK ++HRVGR AR G G A ++ P+E+ +L
Sbjct: 384 IDIPLLDNVINYNFPCKPKLFLHRVGRVARA-GRGGTAYSLVCPDEVPYL 432
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 471 (170.9 bits), Expect = 5.3e-42, P = 5.3e-42
Identities = 126/371 (33%), Positives = 198/371 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+K I GF T IQ++ P L+GRD++G AKTGSGKTLAFL+P++ I N + + R
Sbjct: 396 MKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHI-NAQPVLRE 454
Query: 468 GTG--IIIISPTRELSMQTFGVLKELMKY---HHHTYGLIMGGASRQAEAQKLAKGINII 522
G +++++PTREL++Q + +E K+ + + GGAS+ + L KG+ I+
Sbjct: 455 DDGPIVLVLAPTRELALQ---IQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIV 511
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
+ATPGRL+D L++ L + + L++DEADR+LD+GFE +++I++ + RQT++FS
Sbjct: 512 IATPGRLIDILESGKTNL-RRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSA 570
Query: 583 XX-XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EXXXXXXXXXXXXX 640
V+IG + V + + VC E
Sbjct: 571 TWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVE---VCQDFEKKERMLSFLGSVG 627
Query: 641 XXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
V+VF + V +L + + IHG + Q +R QF N I++ TD
Sbjct: 628 RDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATD 687
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSG--HALLILRPEELG--FLR 756
VA+RGLDI + ++V YD P+ + YIHR+GRTAR G+SG ++LL L ++
Sbjct: 688 VASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARA-GASGVSYSLLTTDNARLANELIK 746
Query: 757 YLKQAK--IPL 765
L +AK IP+
Sbjct: 747 VLTEAKQKIPI 757
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 451 (163.8 bits), Expect = 5.8e-42, P = 5.8e-42
Identities = 117/352 (33%), Positives = 189/352 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN--LKFMP 465
+++I GF K T IQ+++ P +L+G DL+G A+TG+GKTL++L+P I++ +
Sbjct: 213 MQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPVSRKQ 272
Query: 466 RNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQKLAKGINI 521
RNG G+++++PTREL++Q V E KY + GL I GG +R+ + Q + KG++I
Sbjct: 273 RNGPGMLVLTPTRELALQ---VEAECSKYLYK--GLKSVCIYGGGNRKGQIQDVTKGVDI 327
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED-MKQIVNLLPKRRQTMLF 580
I+ATPGRL D LQ +++ L++DEAD++LD+GFE MK ++++ P R+ M
Sbjct: 328 IIATPGRLND-LQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMTT 386
Query: 581 SXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXX 640
+ VY+G T + TV ++Q +V E
Sbjct: 387 ASWPDSTRRLAQSYLKQPMIVYVG---TLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSL 443
Query: 641 X-XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCT 699
V+VF S + L+ +PV +HG ++Q R F IL+ T
Sbjct: 444 SPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIAT 503
Query: 700 DVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
D+AARGLD+ V + Y+ P + +EY+HRVGRT R G G ++ ++ ++
Sbjct: 504 DLAARGLDVSDVTHVYNYNFPRNIEEYVHRVGRTGRA-GKIGESITLVTQDD 554
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 469 (170.2 bits), Expect = 6.2e-42, P = 6.2e-42
Identities = 115/366 (31%), Positives = 186/366 (50%)
Query: 393 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLV 452
+ FE + + LKA + G++ T IQ IP L G+D+ A TG+GKT AF++
Sbjct: 147 NVSFEQMN--LSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVL 204
Query: 453 PAVE-LIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
P +E +IY K + T ++++ PTREL++Q F V ++L + L GG +A+
Sbjct: 205 PILERMIYRPK--GASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQ 262
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
L G +++VATPGRL+DHL N+P F N++ L++DEADR+L+ F + M +++ L
Sbjct: 263 EAALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRLC 322
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXX 631
+ RQT+LFS PV I +++ + A E + E
Sbjct: 323 AQNRQTLLFSATMTEEIDELASMSLQK-PVKIFINENTDTALKLRQEFIRIRAGRETDRE 381
Query: 632 XXXXXXXXXXXXX-VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCN 690
+VF + + LL + + V + Q +R + +F
Sbjct: 382 AMVAALVTRTFQTNTIVFVRTKKDCQRMQILLGLLGIKVGQMQSSLTQGQRIESLSKFKK 441
Query: 691 AETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 750
AE +L+ TD+A+RGLDI V ++ + P K+YIHRVGRTAR G +G ++ ++ +
Sbjct: 442 AEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARA-GKAGRSISLVGED 500
Query: 751 ELGFLR 756
E L+
Sbjct: 501 ERKLLK 506
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 450 (163.5 bits), Expect = 7.4e-42, P = 7.4e-42
Identities = 109/352 (30%), Positives = 177/352 (50%)
Query: 394 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 453
++F+A + E+ + + G+ + T IQ IP L+ G DL+G A+TG+GKT AF +P
Sbjct: 2 SEFKAFS--LLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLP 59
Query: 454 AVELIYNLKF-MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEA 512
+ K + T +I++PTREL+ Q + + ++ GG RQA+
Sbjct: 60 IINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQV 119
Query: 513 QKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLP 572
+ G++I+VATPGRLLD ++ T + +K L+ ++DEAD +LD+GF +D++ I++ LP
Sbjct: 120 DSIELGLDILVATPGRLLDLIE-TGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLP 178
Query: 573 KRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXX 632
K RQT+LFS P I + T E T+ + Q
Sbjct: 179 KSRQTLLFSATMPAEIEILAEAILTD-PTKIQI--TAETVTIDLVNQSVYHLDKSNKVPL 235
Query: 633 XXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAE 692
V++F + + L + +H + Q R F ++
Sbjct: 236 LFNILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDST 295
Query: 693 TGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
+L+ TDVAARG+D+ + ++ Y+ P+DP+ YIHR+GRTAR G SG A+
Sbjct: 296 LRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARA-GKSGMAI 346
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 449 (163.1 bits), Expect = 9.6e-42, P = 9.6e-42
Identities = 118/362 (32%), Positives = 182/362 (50%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
+++ F AL K L + MGF MT IQA+++P +L+G+D++G KTGSGKT AF
Sbjct: 1 MNANSFAALNLK--PELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAF 58
Query: 451 LVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM-GGASRQ 509
+ ++ NL + R +++ PTREL+ Q ++ L + H+ L + GG
Sbjct: 59 ---GLGVLSNLN-VKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMG 114
Query: 510 AEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVN 569
+ L G +I+V TPGR+LDHL L L L++DEADR+L++GF+E ++ I+
Sbjct: 115 PQIGSLEHGAHILVGTPGRILDHLSKDRIDL-SELNTLVLDEADRMLEMGFQEALEAIIA 173
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXX 629
P RQT+LFS + I V+ T + +++ + Y V S
Sbjct: 174 AAPAERQTLLFSATYPASIEQIAQSVTRNA-LMIKVEATHDTSSIR--QYFYKVEGSAAR 230
Query: 630 XXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
+VF ++ V+ + L+ V+ +HG +Q +R QF
Sbjct: 231 DEALETLLLHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFA 290
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
N IL+ TDVAARGLD+ +D + YD DP+ ++HR+GRT R GS G A
Sbjct: 291 NKSISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRA-GSKGLAFSFFSD 349
Query: 750 EE 751
E
Sbjct: 350 NE 351
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 447 (162.4 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 124/408 (30%), Positives = 201/408 (49%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
LKA+ G+ +T IQ IP + +G DL+ SA+TG+GKT AF +P ++ I ++
Sbjct: 13 LKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAKANHAAKS 72
Query: 468 GT--------------G----IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQ 509
T G +I++PTREL+ Q +K+ +Y G++ GG
Sbjct: 73 STTSTDENSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMA 132
Query: 510 AEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVN 569
++ + L +G++++VATPGRLL+HL L ++ L++DEADR+LD+GF D+++++
Sbjct: 133 SQTKMLKQGLDVLVATPGRLLEHLALRNVDL-SQVKFLVLDEADRMLDMGFLTDIEKLLL 191
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXX 629
+ + QT++FS P I V +KE T ++Q E
Sbjct: 192 AVKHKHQTLMFSATFSDRVKSLANQLLKS-PKTISV--SKENTTSGKIKQAVYWVTEERK 248
Query: 630 XXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
V+VF + S + L + HG + Q R QF
Sbjct: 249 RELLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFS 308
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
+ +L+ TDVAARGLDIP + ++V + P P++Y+HRVGRT R G SG A+ ++ P
Sbjct: 309 EGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRA-GKSGTAISLVSP 367
Query: 750 EELGFLRYLKQA------KIPLNEFEFSWSKISDIQLQLEKLISKNYF 791
++ FL ++Q +I +EF+ + S+ Q K SKN +
Sbjct: 368 KDERFLENIEQLIERKFERIVAPGYEFNRLEASEYQEATVKRDSKNRY 415
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 446 (162.1 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 111/364 (30%), Positives = 186/364 (51%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTG 470
+ ++G+ T +QA TIP +L GRD++ A TGSGKT AF +P ++ + K ++ G
Sbjct: 24 LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSA-G 82
Query: 471 II---IISPTRELSMQTFGVLKELMKYHHHTYGLI-----MGGASRQAEAQKLAKGINII 522
++ ++ PTREL+ Q V + Y H G + GG S + Q L G +++
Sbjct: 83 VVRCLVLVPTRELAQQ---VADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVL 139
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
VATPGRLLD L + L + + ++DEADR+L +GF E+++Q++ LP+++QT+LFS
Sbjct: 140 VATPGRLLDLLASNALKLTQ-VSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSA 198
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
P+ + +++E+T+ EQ + E
Sbjct: 199 TFPEEVRALTTKLLHQ-PLEYHLQ-SEQESTI---EQRVITVNREQKTALLAHLIKQHQW 253
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
++F S+ + + L+ + HG + Q RT F N E +L+ TD+A
Sbjct: 254 SQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIA 313
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQA 761
ARG+DI + ++ +D P P +Y+HR+GR+ R G +G A+ ++ EE + K+
Sbjct: 314 ARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRA-GEAGLAVTLISHEEYHHFGVIEKKN 372
Query: 762 KIPL 765
KI L
Sbjct: 373 KIKL 376
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 446 (162.1 bits), Expect = 2.0e-41, P = 2.0e-41
Identities = 111/364 (30%), Positives = 186/364 (51%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTG 470
+ ++G+ T +QA TIP +L GRD++ A TGSGKT AF +P ++ + K ++ G
Sbjct: 24 LTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRLSEAKSADKSA-G 82
Query: 471 II---IISPTRELSMQTFGVLKELMKYHHHTYGLI-----MGGASRQAEAQKLAKGINII 522
++ ++ PTREL+ Q V + Y H G + GG S + Q L G +++
Sbjct: 83 VVRCLVLVPTRELAQQ---VADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVL 139
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
VATPGRLLD L + L + + ++DEADR+L +GF E+++Q++ LP+++QT+LFS
Sbjct: 140 VATPGRLLDLLASNALKLTQ-VSAFVLDEADRMLSLGFTEELEQVLAALPRQKQTLLFSA 198
Query: 583 XXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXX 642
P+ + +++E+T+ EQ + E
Sbjct: 199 TFPEEVRALTTKLLHQ-PLEYHLQ-SEQESTI---EQRVITVNREQKTALLAHLIKQHQW 253
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
++F S+ + + L+ + HG + Q RT F N E +L+ TD+A
Sbjct: 254 SQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISVLIATDIA 313
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL-KQA 761
ARG+DI + ++ +D P P +Y+HR+GR+ R G +G A+ ++ EE + K+
Sbjct: 314 ARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRA-GEAGLAVTLISHEEYHHFGVIEKKN 372
Query: 762 KIPL 765
KI L
Sbjct: 373 KIKL 376
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 445 (161.7 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 108/341 (31%), Positives = 180/341 (52%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ + D GF K T IQ + P L GRD++G A TGSGKTL++ +P++ I N + +
Sbjct: 139 LQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHI-NAQPQLQY 197
Query: 468 GTG--IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
G G +++++PTREL++Q + K + GGA + + + LA+G+ I +AT
Sbjct: 198 GDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIAT 257
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGRL+D L+ L K + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 258 PGRLIDMLEAGKTNL-KRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 316
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEA--TVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P+ + + + A T+ L +
Sbjct: 317 KEVQQLTRDYLND-PIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDN 375
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++VF S+ + L P + IHG ++Q +R +F +T I++ TDVAA
Sbjct: 376 KILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAA 435
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
RG+D+ + ++ YD P + ++Y+HR+GRT RG G+SG A+
Sbjct: 436 RGIDVKGITHVINYDMPGNIEDYVHRIGRTGRG-GASGTAI 475
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 445 (161.7 bits), Expect = 2.6e-41, P = 2.6e-41
Identities = 108/345 (31%), Positives = 175/345 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ +A +G+ +MT IQA ++P +L G+D++ AKTGSGKT AF + + + L F +
Sbjct: 16 LRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALSFRVQ- 74
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-IMGGASRQAEAQKLAKGINIIVATP 526
+++ PTREL+ Q L+ L ++ + L I GG + L G ++++ TP
Sbjct: 75 ---ALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTP 131
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLDHL+ L L+ L++DEADR+LD+GF++D+ ++ P +RQT+LFS
Sbjct: 132 GRLLDHLRRGSLDL-SALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFSATYPD 190
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
PV + VD+ E + EQ + S +
Sbjct: 191 SIAAMSAGVQRE-PVEVSVDEVHGEGAI---EQVFYEVDSGQRIEAVERILGHYRPESAL 246
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F ++ + + L + IHG Q +R +F N +L+ TDVAARGL
Sbjct: 247 IFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGL 306
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
DI + ++ Y+ +P+ + HR+GRT R G G A+ ++ P E
Sbjct: 307 DIKELSAVINYELTRNPEVHTHRIGRTGRA-GERGLAVSLVTPRE 350
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 444 (161.4 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 116/349 (33%), Positives = 175/349 (50%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
F LK K L+ ++ MG+ +MT IQA+++P +L G D++G KTGSGKT AF +
Sbjct: 3 FSTLKLKT--ELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAF---GL 57
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM-GGASRQAEAQK 514
L+ L + R +++ PTREL+ Q ++ L + H+ L + GG +
Sbjct: 58 GLLNKLD-VKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGS 116
Query: 515 LAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR 574
L G +IIV TPGR++DHL L NL L++DEADR+L++GF+ + I+ P+
Sbjct: 117 LEHGAHIIVGTPGRIVDHLDRNRLDL-SNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRE 175
Query: 575 RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXX 634
RQT+LFS PV + T E+ T+ + Y + +
Sbjct: 176 RQTLLFSATFPEQIQSIAKQIMYN-PVMVKAAVTHEKNTIE--QHFYQLDDDKSRMQALQ 232
Query: 635 XXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETG 694
+VF ++ + + L + V+ +HG +Q R T QF N
Sbjct: 233 LLLLEHKPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSAC 292
Query: 695 ILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
+L+ TDVAARGLDI A+D + Y D + +IHR+GRT R GS G A
Sbjct: 293 VLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRA-GSKGAA 340
>TIGR_CMR|CPS_0174 [details] [associations]
symbol:CPS_0174 "ATP-dependent RNA helicase RhlB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006402
"mRNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0006401 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K03732 OMA:HIDGIKY ProtClustDB:PRK04837
RefSeq:YP_266942.1 ProteinModelPortal:Q48AH1 STRING:Q48AH1
GeneID:3521970 KEGG:cps:CPS_0174 PATRIC:21463765
BioCyc:CPSY167879:GI48-277-MONOMER Uniprot:Q48AH1
Length = 428
Score = 444 (161.4 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 114/359 (31%), Positives = 184/359 (51%)
Query: 391 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 450
L+ T+F L + + + MGF T IQA+++P LL+G DL G A+TG GKT+AF
Sbjct: 6 LTETKFADLN--LAPQVVTGLEAMGFDYCTSIQAKSLPVLLQGTDLAGQAQTGEGKTIAF 63
Query: 451 LVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQA 510
L + + N +I++PTREL++Q E+ K G++ GG ++
Sbjct: 64 LAATFHHLLQKEAPTHNQPRALIMAPTRELAIQIHRDATEMAKSTGLRLGVVYGGEGYES 123
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNL 570
+ +L G++I++ T GRL+D+++ L KN++ +++DEADR+ D+GF +D++ + +
Sbjct: 124 QRLELEAGVDILIGTCGRLIDYMKQGIYNL-KNIEVIVLDEADRMFDLGFIKDIRYMFDK 182
Query: 571 LPK--RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEX 628
+P R +MLFS P + V+ E+ T + + + +E
Sbjct: 183 MPPATERLSMLFSATLSFRVKELAFDHMND-PTSVEVEP--EQKTNSRISEELFYPSNED 239
Query: 629 XXXXXXXXXXXXXXXXVMVFFSS---CMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTF 685
+VF ++ C V F H LN + V + G Q KR
Sbjct: 240 KMTLLQTLIEEDWPEKAIVFANTKHVCEKV-FDH--LNADKIRVGLLTGDVPQKKRLKIL 296
Query: 686 FQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
+F + IL+ TDVAARGL IP+V + YD PDD ++Y+HR+GRT R G +GHA+
Sbjct: 297 EEFTDGTVDILVATDVAARGLHIPSVTHVFNYDLPDDCQDYVHRIGRTGRA-GETGHAI 354
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 444 (161.4 bits), Expect = 3.4e-41, P = 3.4e-41
Identities = 116/349 (33%), Positives = 175/349 (50%)
Query: 396 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 455
F LK K L+ ++ MG+ +MT IQA+++P +L G D++G KTGSGKT AF +
Sbjct: 3 FSTLKLKT--ELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAF---GL 57
Query: 456 ELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM-GGASRQAEAQK 514
L+ L + R +++ PTREL+ Q ++ L + H+ L + GG +
Sbjct: 58 GLLNKLD-VKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGS 116
Query: 515 LAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKR 574
L G +IIV TPGR++DHL L NL L++DEADR+L++GF+ + I+ P+
Sbjct: 117 LEHGAHIIVGTPGRIVDHLDRNRLDL-SNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRE 175
Query: 575 RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXX 634
RQT+LFS PV + T E+ T+ + Y + +
Sbjct: 176 RQTLLFSATFPEQIQSIAKQIMYN-PVMVKAAVTHEKNTIE--QHFYQLDDDKSRMQALQ 232
Query: 635 XXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETG 694
+VF ++ + + L + V+ +HG +Q R T QF N
Sbjct: 233 LLLLEHKPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSAC 292
Query: 695 ILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
+L+ TDVAARGLDI A+D + Y D + +IHR+GRT R GS G A
Sbjct: 293 VLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRA-GSKGAA 340
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 333 (122.3 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 73/177 (41%), Positives = 112/177 (63%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
+ L+AI GF T IQ +TIP LLEGRD+VG A+TGSGKT AF++P +E + + +
Sbjct: 78 QTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLKST--L 135
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVA 524
+ T +I+SP REL++QT V+K+ K I+GG S + + L+ +I+VA
Sbjct: 136 ANSNTRALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLEEQFSLLSGKPDIVVA 195
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
TPGR L HL+ + +++ ++ DEADR+ ++GF + +I++ LP RQT+LFS
Sbjct: 196 TPGRFL-HLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSRQTLLFS 251
Score = 188 (71.2 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 43/110 (39%), Positives = 63/110 (57%)
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
+VF + V++ ELL V I+G Q R F +T +L+ TDVA+RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
+DIP + ++ YD P PK ++HRVGRTAR G +G A ++R E+ G+L
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARA-GRTGWAYSLVRAEDAGYL 458
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 443 (161.0 bits), Expect = 4.3e-41, P = 4.3e-41
Identities = 114/364 (31%), Positives = 180/364 (49%)
Query: 402 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL 461
K+ + LKA+A G+T+ T +QA +P LE DL+ +A+TG+GKT AF++PA++ + +
Sbjct: 7 KLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQRLSSP 66
Query: 462 KFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINI 521
P G +++++PTREL+ Q ++ + G I+GG A+ + L+ ++
Sbjct: 67 PQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLSAPVDF 126
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
IVATPGRL+D L L + L+ L++DEADR+LD+GF +D+ +I P RQT+LF+
Sbjct: 127 IVATPGRLVDLLDRRSLDLSR-LELLVLDEADRMLDMGFSDDVDRIAAASPATRQTLLFT 185
Query: 582 XXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXX 641
P I + TK T +EQ V
Sbjct: 186 ATMDSAMARLAGRLLRE-PERIDIAGTK--TTHEHIEQRLHVADDLHHKNRLLRHLITDE 242
Query: 642 XXXVMVFFSSCMSVKFHHEL-LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
+ FS+ + L L +HG Q R T +L+ TD
Sbjct: 243 SLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATD 302
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL----R 756
VAARGLD+ + ++ +D P ++Y+HR+GRT R G+SG A+ E+ +L R
Sbjct: 303 VAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRA-GASGIAISFASLNEVNYLARIER 361
Query: 757 YLKQ 760
Y+ Q
Sbjct: 362 YIGQ 365
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 443 (161.0 bits), Expect = 4.3e-41, P = 4.3e-41
Identities = 108/342 (31%), Positives = 183/342 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ + GFT+ T IQ++ P ++GRDL+G A+TGSGKTL++L+PA+ + N + M +
Sbjct: 111 LEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHV-NAQPMLAH 169
Query: 468 GTG--IIIISPTRELSMQTFGVLKELMKYHHHTY---GLIMGGASRQAEAQKLAKGINII 522
G G +++++PTREL++Q + +E K+ + I GG + + + L KG+ I+
Sbjct: 170 GDGPIVLVLAPTRELAVQ---IQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIV 226
Query: 523 VATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSX 582
+ATPGRL+D +++ L + + L++DEADR+LD+GF+ +++IV+ + RQT+ +S
Sbjct: 227 IATPGRLIDMMESNNTNL-RRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSA 285
Query: 583 XXXXXXXXXXXXXXXX-XPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXX 641
V IG D K + + V+ S+
Sbjct: 286 TWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVD--VISESQKYNKLVKLLEDIMD 343
Query: 642 XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDV 701
++VF + L P + IHG + Q +R +F + ++ I+ TDV
Sbjct: 344 GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV 403
Query: 702 AARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
AARGLD+ V +++ YD P ++Y+HR+GRT R G+ G A
Sbjct: 404 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRA-GAKGTA 444
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 442 (160.7 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 117/376 (31%), Positives = 187/376 (49%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L + +G+ +MT IQA+++P +L+G DL+ AKTGSGKT AF + + I N ++
Sbjct: 18 LANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNPI-NPRYF--- 73
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM-GGASRQAEAQKLAKGINIIVATP 526
G ++I PTREL+ Q ++ L + + L + GG S + L G +IIV TP
Sbjct: 74 GCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTP 133
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GR+ HL+ + L L++DEADR+LD+GF + ++ I+ P RRQT+LFS
Sbjct: 134 GRIQQHLRKG-SLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFSATYPV 192
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P + + ++ + ++ Y + P E V
Sbjct: 193 GIKQLASKFMRD-PQTVKAEAFHDDTQIE--QRFYEISPEERMSAVTKVLHHFRPASCVA 249
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
F+ V+ + L + + +HG +Q R F N T +L+ TDVAARGL
Sbjct: 250 FCFTK-QQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGL 308
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA-KIPL 765
DI A+D ++ + D + +IHRVGRT R G G A+ ++ P E + ++Q K PL
Sbjct: 309 DIDALDMVINVELARDSEIHIHRVGRTGRA-GEKGIAVSLVAPSEAHRAQAIEQLQKAPL 367
Query: 766 NEFEFSWSKISDIQLQ 781
N W ++ +++ Q
Sbjct: 368 N-----WDQVDNLKSQ 378
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 442 (160.7 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 115/351 (32%), Positives = 175/351 (49%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ E + + G T+ T IQ + IP +L G+D++G AKTG+GKTLAF++P +E K
Sbjct: 12 ISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILE-----K 66
Query: 463 FMPRNG-TGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-IMGGASRQAEAQKLAKGIN 520
P + +I++PTREL++Q +K+++ L I GG + +KL +
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 521 IIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLF 580
I+VATPGRLLDH++ L NL +++DEAD++L GF D++ I++ P +QTMLF
Sbjct: 127 IVVATPGRLLDHIRRETIDL-SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLF 185
Query: 581 SXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXX 640
S P I V EE TV +EQ +
Sbjct: 186 SATIPKDIKKLAKRYMDE-PQMIQVQS--EEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 641 XXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++F + + ++ L + +HG Q KR F A+ L+ TD
Sbjct: 243 QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATD 302
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
VAARGLD+ V + YD P+D + YIHR+GRT R G SG A+ + ++
Sbjct: 303 VAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRA-GGSGLAITFVAAKD 352
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 442 (160.7 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 115/351 (32%), Positives = 175/351 (49%)
Query: 403 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 462
+ E + + G T+ T IQ + IP +L G+D++G AKTG+GKTLAF++P +E K
Sbjct: 12 ISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILE-----K 66
Query: 463 FMPRNG-TGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-IMGGASRQAEAQKLAKGIN 520
P + +I++PTREL++Q +K+++ L I GG + +KL +
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGNTH 126
Query: 521 IIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLF 580
I+VATPGRLLDH++ L NL +++DEAD++L GF D++ I++ P +QTMLF
Sbjct: 127 IVVATPGRLLDHIRRETIDL-SNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTMLF 185
Query: 581 SXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXX 640
S P I V EE TV +EQ +
Sbjct: 186 SATIPKDIKKLAKRYMDE-PQMIQVQS--EEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 641 XXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++F + + ++ L + +HG Q KR F A+ L+ TD
Sbjct: 243 QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATD 302
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
VAARGLD+ V + YD P+D + YIHR+GRT R G SG A+ + ++
Sbjct: 303 VAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRA-GGSGLAITFVAAKD 352
>SGD|S000002602 [details] [associations]
symbol:MSS116 "DEAD-box protein involved splicing of
mitochondrial introns" species:4932 "Saccharomyces cerevisiae"
[GO:0000373 "Group II intron splicing" evidence=IMP;IDA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA;IMP] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0000372 "Group I intron
splicing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0034337 "RNA folding" evidence=IMP] [GO:0033592
"RNA strand annealing activity" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002602
GO:GO:0005524 GO:GO:0006417 GO:GO:0005759 GO:GO:0006397
EMBL:BK006938 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:Z48784 GO:GO:0000373 GO:GO:0000372
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00700000105515 GO:GO:0033592 OrthoDB:EOG437VPN
PIR:S02116 RefSeq:NP_010480.1 PDB:3I5X PDB:3I5Y PDB:3I61 PDB:3I62
PDB:3SQW PDB:3SQX PDB:4DB2 PDB:4DB4 PDBsum:3I5X PDBsum:3I5Y
PDBsum:3I61 PDBsum:3I62 PDBsum:3SQW PDBsum:3SQX PDBsum:4DB2
PDBsum:4DB4 ProteinModelPortal:P15424 SMR:P15424 DIP:DIP-5368N
IntAct:P15424 MINT:MINT-525340 STRING:P15424 PaxDb:P15424
PeptideAtlas:P15424 EnsemblFungi:YDR194C GeneID:851775
KEGG:sce:YDR194C CYGD:YDR194c HOGENOM:HOG000113654 OMA:PEAHENI
EvolutionaryTrace:P15424 NextBio:969573 Genevestigator:P15424
GermOnline:YDR194C GO:GO:0034337 Uniprot:P15424
Length = 664
Score = 294 (108.6 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 70/190 (36%), Positives = 112/190 (58%)
Query: 409 KAIADMGFTKMTEIQARTIPPLL--EGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 466
KAI M F +T +Q +TI P+L E D++ AKTG+GKT AFL+P + + N KF +
Sbjct: 119 KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ 178
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL-------IMGGASRQAEAQKLAK-G 518
+I++PTR+L++Q + E+ K H YGL ++GG +A K+ K
Sbjct: 179 YMVKAVIVAPTRDLALQ---IEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLR 235
Query: 519 INIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR--- 575
NI++ATPGRL+D L+ ++ + ++DEADR+L+IGF +D++ I +L ++
Sbjct: 236 PNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKS 295
Query: 576 ----QTMLFS 581
+T+LFS
Sbjct: 296 ADNIKTLLFS 305
Score = 223 (83.6 bits), Expect = 5.9e-41, Sum P(2) = 5.9e-41
Identities = 46/97 (47%), Positives = 63/97 (64%)
Query: 666 DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKE 725
DLP++ HGK Q KRT+ +F E+GIL+CTDV ARG+D P V ++Q P +
Sbjct: 400 DLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELAN 459
Query: 726 YIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQAK 762
YIHR+GRTAR G G ++L + +EL F+R L+ AK
Sbjct: 460 YIHRIGRTARS-GKEGSSVLFICKDELPFVRELEDAK 495
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 319 (117.4 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 70/175 (40%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ A+ D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 102 MDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 161
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 162 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 221
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L+ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 222 GRLIDFLEAGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 275
Score = 185 (70.2 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 363 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 422
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 423 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 452
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 441 (160.3 bits), Expect = 7.2e-41, P = 7.2e-41
Identities = 110/346 (31%), Positives = 175/346 (50%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY--NLKFMPRNG 468
+A++G+ + T IQ IP +L +D++ A+TG+GKT AF +P ++L+ N
Sbjct: 16 LAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKA 75
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHT---YGLIMGGASRQAEAQKLAKGINIIVAT 525
+++ PTREL++Q V + +KY T G+ GG S +A+ GI++++AT
Sbjct: 76 IRALVLVPTRELALQ---VQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIAT 132
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGRLLDHL+ L L L+ DEADR+LD+GF ++++ ++ +P +RQT+LFS
Sbjct: 133 PGRLLDHLRQGALNL-NQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLD 191
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P I V K T A +EQ S+ V
Sbjct: 192 DSIFSFSKNLLRD-PKRIEV--AKPNTTAAQIEQRVYAIDSDRKTEFVSHLVRSKNWQQV 248
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F + V LN + + HG Q R +F +L+ TDVAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
LDI + +++ ++ P ++YIHR+GRT R GS+G A+ + E+
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRA-GSAGLAITLFSQED 353
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 441 (160.3 bits), Expect = 7.2e-41, P = 7.2e-41
Identities = 110/346 (31%), Positives = 175/346 (50%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY--NLKFMPRNG 468
+A++G+ + T IQ IP +L +D++ A+TG+GKT AF +P ++L+ N
Sbjct: 16 LAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKA 75
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHT---YGLIMGGASRQAEAQKLAKGINIIVAT 525
+++ PTREL++Q V + +KY T G+ GG S +A+ GI++++AT
Sbjct: 76 IRALVLVPTRELALQ---VQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIAT 132
Query: 526 PGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXX 585
PGRLLDHL+ L L L+ DEADR+LD+GF ++++ ++ +P +RQT+LFS
Sbjct: 133 PGRLLDHLRQGALNL-NQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLD 191
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P I V K T A +EQ S+ V
Sbjct: 192 DSIFSFSKNLLRD-PKRIEV--AKPNTTAAQIEQRVYAIDSDRKTEFVSHLVRSKNWQQV 248
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F + V LN + + HG Q R +F +L+ TDVAARG
Sbjct: 249 LIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARG 308
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
LDI + +++ ++ P ++YIHR+GRT R GS+G A+ + E+
Sbjct: 309 LDIAELQYVINFELPFIAEDYIHRIGRTGRA-GSAGLAITLFSQED 353
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 440 (159.9 bits), Expect = 9.2e-41, P = 9.2e-41
Identities = 111/351 (31%), Positives = 176/351 (50%)
Query: 402 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL 461
K+ L AIAD+G+TK T IQ + IP +L G+D++ +A+TG+GKT +F++P +E + +
Sbjct: 7 KLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQ 66
Query: 462 -----KFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLA 516
K + +I+ PTREL++Q + + KY + + GG Q + Q+L
Sbjct: 67 YKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRLI 126
Query: 517 KGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQ 576
G++I+VATPGRLLD + + + L L++DEADR+LD+GF +D+ +I+ LP+ RQ
Sbjct: 127 WGVDILVATPGRLLD-MTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQ 185
Query: 577 TMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXX 636
+LFS PV I + K A+ +EQ V
Sbjct: 186 NLLFSATMSEEVRGLAKRTIHK-PVEISIGADK--ASKPKIEQWLVTVDKANKSALLSHI 242
Query: 637 XXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGIL 696
++F + L + IH + Q R F + + L
Sbjct: 243 ITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFL 302
Query: 697 LCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
+ T +AARGLDI + ++ YD P +YIHR+GRT R G+SG A+ ++
Sbjct: 303 VATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRA-GASGEAISLV 352
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 334 (122.6 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 84/225 (37%), Positives = 130/225 (57%)
Query: 369 TPPLISVGTVISADVSLSIPSILSSTQFEAL-KGKVCENTLKAIA-DMGFTKMTEIQART 426
T L + G ++S+ P T+F L K + E+ +KAI DM + MT++Q+ T
Sbjct: 50 TSRLFTSGAEAQQELSVQ-PGSTKITKFSDLAKANIDESIIKAITVDMRYEDMTDVQSMT 108
Query: 427 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN----LK---------FMPRNGTGIII 473
+ P L+G+DLV AKTG+GKTLAFL+P ++ I + LK F R II
Sbjct: 109 LAPALKGKDLVAQAKTGTGKTLAFLIPVIQKILDADPSLKEVSRGRPRRFAQRQSIKAII 168
Query: 474 ISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKL-AKGINIIVATPGRLLDH 532
ISPTREL+ Q L + + T +GG ++ +++ +G +++V TPGRL D
Sbjct: 169 ISPTRELAEQIGKEATRLCQRNGVTVQTAVGGTGKRESLRRIHMEGCHLLVGTPGRLNDL 228
Query: 533 LQNTPEFL-YKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQ 576
L + + N+Q L++DEADR+LD+GFE +++ IV++LP R+Q
Sbjct: 229 LSDELSGIDASNVQALVLDEADRMLDVGFENELRSIVDMLPDRQQ 273
Score = 178 (67.7 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 44/108 (40%), Positives = 61/108 (56%)
Query: 653 MSVKFHHELLNYI-DLP-VMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPA 710
M+ + EL I DLP V IH + Q +RT F +++GIL+ TDV ARG+D P
Sbjct: 370 MAGELFRELAVQIPDLPEVFHIHAQLSQNQRTKAADYFRKSKSGILISTDVTARGMDFPN 429
Query: 711 VDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL 758
V ++Q P D ++YIHR+GRTAR G G L + +L RY+
Sbjct: 430 VTHVIQVGLPPDQEQYIHRLGRTARA-GKDGQGWLFVPHYDLRDARYM 476
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 459 (166.6 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 115/353 (32%), Positives = 181/353 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
+K I G+ T IQ +TIP +LEGRD+V AKTGSGKT FL+P E + + P
Sbjct: 51 IKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRRE--PTK 108
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
G +I+SPTREL++QT+ +KEL ++ L++GG S ++ + ++IVATPG
Sbjct: 109 GARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVATPG 168
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
R L HL + +++ ++ DEADR+ ++GF E + + ++ LP RQT++FS
Sbjct: 169 RFL-HLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKL 227
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC-PSEXXXXXXXXXXXXXXXXXVM 646
PV I +D + L+ ++ C P +
Sbjct: 228 LVEFARAGLND-PVLIRLDVESKLPDALALK--FLYCRPDDRYTALVVLLKYVIPVQSQT 284
Query: 647 VFFSSCMSVKFHHELLNYI----DLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
V F+ + H EL++YI + ++ R +F N + +L+ TDVA
Sbjct: 285 VVFAG---TQHHVELISYILTEAGISNASVYSSLDPAARKINTAKFVNKKVSVLIVTDVA 341
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
ARG+DIP++D++V P PK ++HRVGR AR G +G A I+ ++ L
Sbjct: 342 ARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARA-GRTGTAYSIVSTDDTAHL 393
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 437 (158.9 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 125/371 (33%), Positives = 182/371 (49%)
Query: 382 DVSLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAK 441
D S PS+ F L L A D GF T IQ+ T P L GRD++G A+
Sbjct: 62 DASADKPSLRPIISFSFLPPS--NKDLYAPLD-GFASPTAIQSATWPLLFAGRDVIGIAE 118
Query: 442 TGSGKTLAFLVPAVELIYNLKFMPRNGTGI-IIISPTRELSMQTFGVLKELMKYHHHTYG 500
TGSGKTLAF +P ++ + +LK ++ + ++ISPTREL+MQ + L + +
Sbjct: 119 TGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQVA 178
Query: 501 LIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGF 560
I GG + + + L K ++VATPGRL D LQN ++ L++DEADR+LD GF
Sbjct: 179 CIFGGVKKDEQREAL-KSAAVVVATPGRLKD-LQNDGSLDLGRVKYLVLDEADRMLDKGF 236
Query: 561 EEDMKQIVNLLP-KRRQTMLFSXXXXXXXXXXXXXXXXX-XPVYIGVDDTKEEATVAGLE 618
E+D+K I++ +P +RQT++F+ V IG D + + + ++
Sbjct: 237 EQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRANSRIK 296
Query: 619 QGY-VVCPSEXXXXXXXXXXXXXXXX--XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGK 675
Q VV P E V+ F LL V IHG
Sbjct: 297 QVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGD 356
Query: 676 QKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 735
Q +R + F + +L+ TDVAARGLDIP V +V P ++Y+HR+GRT R
Sbjct: 357 LSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGR 416
Query: 736 GEGSSGHALLI 746
G+ GHA+ +
Sbjct: 417 A-GADGHAITL 426
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 463 (168.0 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 113/347 (32%), Positives = 181/347 (52%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
L+ + GF T IQA+T P L+ RD+V AKTGSGKTL +L+PA L+ + + RN
Sbjct: 447 LRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRN 506
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPG 527
G ++I++PTREL+ Q + + + GGA + + ++L +G +I+VATPG
Sbjct: 507 GPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPG 566
Query: 528 RLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXX 587
RL D L+ ++ + L++DEADR+LD+GFE +++IVN +P RRQT++++
Sbjct: 567 RLNDILE-MKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKE 625
Query: 588 XXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPS-EXXXXXXXXXXXXXXXXXVM 646
PV + + E A + Q V P E V+
Sbjct: 626 VRKIASDLLVN-PVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVI 684
Query: 647 VFFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+F C + + L + + IHG + Q +R QF + ++ +L+ TDVAAR
Sbjct: 685 IF---CSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAAR 741
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
GLDI + ++ YD P ++Y+HR+GRT R G++G A ++
Sbjct: 742 GLDIKDIRVVINYDFPTGVEDYVHRIGRTGRA-GATGVAFTFFTEQD 787
Score = 45 (20.9 bits), Expect = 2.4e-40, Sum P(2) = 2.4e-40
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 65 AEPGPKLPVPTLNVPSIWESLLDRIVAELTVYPPES 100
A GP+ +P W+ L+D L + PE+
Sbjct: 9 ASAGPRYAPEDPTLPQPWKGLIDGSTGILYYWNPET 44
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 436 (158.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 105/356 (29%), Positives = 177/356 (49%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP 465
N + A+ G+ + + IQ ++IP +L G D++G A+TG+GKT AF +P + I K P
Sbjct: 16 NIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHRIDPSKREP 75
Query: 466 RNGTGIIIISPTRELSMQTFGVLKELMKYHHH-TYGLIMGGASRQAEAQKLAKGINIIVA 524
+ +I++PTREL++Q + K T + GGA + + + G I+VA
Sbjct: 76 Q----ALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQIVVA 131
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXX 584
TPGRL DHL+ + L + L++DEAD +L +GF +D++ I +P+ RQT+LFS
Sbjct: 132 TPGRLCDHLRRDEKVL-ATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSATL 190
Query: 585 XXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXX 644
P ++ + + TV +EQ +++ ++
Sbjct: 191 PQSIRAIAERHLKD-PKHVKIQSKTQ--TVTAIEQAHLLVHADQKTSAVLSLLEVEDFDA 247
Query: 645 VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+++F + + L ++G Q +R + I++ TDVAAR
Sbjct: 248 LIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAAR 307
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
GLD+P + + D P DP+ Y+HR+GRT R G G ALL++ P E L+ +++
Sbjct: 308 GLDVPRITHVFNVDMPYDPESYVHRIGRTGRA-GREGRALLLVTPRERRMLQVIER 362
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 436 (158.5 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 119/379 (31%), Positives = 202/379 (53%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP 465
+TLKA+A + T+IQ I +LEGR+ +G AKTGSGKT AF +P +E K+
Sbjct: 20 DTLKALA---IYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE-----KWS- 70
Query: 466 RNGTGI--IIISPTRELSMQT---FGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGIN 520
++ +GI +I++PTREL++Q F L + H LI+GG ++ L+K +
Sbjct: 71 KDPSGIFALILTPTRELAIQIDEQFAALGANLNLKH---ALIVGGMDMIRQSIDLSKRPH 127
Query: 521 IIVATPGRLLDHLQ-NTPEFL--YKNLQCLIIDEADRILDIGFEEDMKQIVNLLP--KRR 575
++VATPGRL D ++ N E + + ++ L++DEADR+L F +D+ ++LP + R
Sbjct: 128 VVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDR 187
Query: 576 QTMLFSXXXXXXXXXXXXXXXXXX--PVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
QT+LF+ P+++ +T + + L+Q Y+ S+
Sbjct: 188 QTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAYL 247
Query: 634 XXXXXX--XXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNA 691
++F + + + + +L ++L V +H + Q +R + +F
Sbjct: 248 VHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAE 307
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
IL+ TDVA+RGLDIP+V ++ +D P DP +YIHRVGRTAR G SG ++ I+ +
Sbjct: 308 AAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARA-GRSGESISIVTERD 366
Query: 752 LGFLRYLK-QAKIPLNEFE 769
+ + ++ + L+E+E
Sbjct: 367 VDLVHAIEDRVGTKLSEYE 385
>CGD|CAL0000625 [details] [associations]
symbol:SPB4 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K14809 EMBL:AACQ01000202 EMBL:AACQ01000200
RefSeq:XP_711358.1 RefSeq:XP_711406.1 ProteinModelPortal:Q59NP8
STRING:Q59NP8 GeneID:3647008 GeneID:3647042 KEGG:cal:CaO19.11631
KEGG:cal:CaO19.4154 CGD:CAL0005749 Uniprot:Q59NP8
Length = 631
Score = 350 (128.3 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 94/300 (31%), Positives = 148/300 (49%)
Query: 472 IIISPTRELSMQTFGVLKELMKYHHHTYG------LIMG--GASRQAEAQKLAKGINIIV 523
I++SPTREL+ Q V ++++Y G L++G G R+ Q L I++
Sbjct: 97 IVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQILI 156
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
TPGR+L+ L ++ +L+ +I+DEAD++LD FE+D+ I+ LPK+R+T LFS
Sbjct: 157 GTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTGLFSAT 216
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTK---EEA-TVAGLEQGYVVCPSEXXXXXXXXXXXX 639
PV + V E++ + L+ Y++ E
Sbjct: 217 ISSAGNTIFRTGMNN-PVKVQVKSKNYFGEQSNSPKSLQLSYMMINPELKITTLLTILSK 275
Query: 640 XXXXXVMVFFSSCMSVKFHHELLNYI------DLPV--MCIHGKQKQMKRTTTFFQFCNA 691
+V+F +C SVK +++ N + D P+ +HG+ R T F
Sbjct: 276 YQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQLNTKSRLKTLDNFTQG 335
Query: 692 ETG----ILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
+ IL+ TDVAARG+DIP VD ++Q DPP DP ++HR GRT R G A+++L
Sbjct: 336 DINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDPNVFLHRCGRTGRAN-KVGRAIVML 394
Score = 195 (73.7 bits), Expect = 8.2e-23, Sum P(2) = 8.2e-23
Identities = 53/172 (30%), Positives = 87/172 (50%)
Query: 667 LPVMCIHGKQKQMKRTTTFFQFCNAETG----ILLCTDVAARGLDIPAVDWIVQYDPPDD 722
L +HG+ R T F + IL+ TDVAARG+DIP VD ++Q DPP D
Sbjct: 311 LKFFSLHGQLNTKSRLKTLDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTD 370
Query: 723 PKEYIHRVGRTARGEGSSGHALLILRP---EE--LGFLR----YLKQAKIPLNEFEFSWS 773
P ++HR GRT R G A+++L EE +GF+ +L + IP + +
Sbjct: 371 PNVFLHRCGRTGRAN-KVGRAIVMLNDNCQEEDYIGFMEVKGIFLTKQDIPTSSATKNLH 429
Query: 774 KISDIQLQLEKLISKNYFLNMSGKEAFKAYVRAYDSHHLKQIFDIDTMD-LG 824
+ + Q++L + + ++ + +++ ++R Y H IF + T+D LG
Sbjct: 430 E--NFQIKLRQYMLEDRARHELAVKSYVGFIRYYSKHIASSIFRLATLDYLG 479
Score = 154 (59.3 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP--- 465
+AI+ MG+ MT +QA TIP L +D+V A TGSGKTL+F++P ++ I + + P
Sbjct: 23 EAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRLYKPDSD 82
Query: 466 -------RNGTGI-IIISPTRELSMQTFGVLKELMKY 494
+ G + I++SPTREL+ Q V ++++Y
Sbjct: 83 GDLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQY 119
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 433 (157.5 bits), Expect = 5.4e-40, P = 5.4e-40
Identities = 105/351 (29%), Positives = 189/351 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA-VELIY--NLKFM 464
+K++ + T IQ + P L G+D++G A+TGSGKTLAF++PA V ++ NLK+
Sbjct: 125 IKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKY- 183
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTY---GLIMGGASRQAEAQKLAKGINI 521
+G +++++PTREL+ Q + +E +K+ + GG + + L +G++I
Sbjct: 184 -GDGPIVLVLAPTRELAEQ---IRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHI 239
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
++A PGRL+D L+ L + + L++DEAD++LD+GFE +++IV+ + RQT+++S
Sbjct: 240 LIACPGRLIDLLEQNVTNLMR-VTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWS 298
Query: 582 XXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXX 641
P+ + V A + ++ Y++ E
Sbjct: 299 ATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFK 358
Query: 642 XXX-VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++VF + + F + L +P +CIHG +KQ +R +F ++ I++ TD
Sbjct: 359 DNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATD 418
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
VA+RGLDI V +++ +D P+ ++Y+HR+GRT R GS G + L ++
Sbjct: 419 VASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRA-GSHGASFTFLTADK 468
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 433 (157.5 bits), Expect = 5.4e-40, P = 5.4e-40
Identities = 105/351 (29%), Positives = 189/351 (53%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA-VELIY--NLKFM 464
+K++ + T IQ + P L G+D++G A+TGSGKTLAF++PA V ++ NLK+
Sbjct: 125 IKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKY- 183
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTY---GLIMGGASRQAEAQKLAKGINI 521
+G +++++PTREL+ Q + +E +K+ + GG + + L +G++I
Sbjct: 184 -GDGPIVLVLAPTRELAEQ---IRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHI 239
Query: 522 IVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
++A PGRL+D L+ L + + L++DEAD++LD+GFE +++IV+ + RQT+++S
Sbjct: 240 LIACPGRLIDLLEQNVTNLMR-VTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWS 298
Query: 582 XXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXX 641
P+ + V A + ++ Y++ E
Sbjct: 299 ATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFK 358
Query: 642 XXX-VMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTD 700
++VF + + F + L +P +CIHG +KQ +R +F ++ I++ TD
Sbjct: 359 DNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATD 418
Query: 701 VAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
VA+RGLDI V +++ +D P+ ++Y+HR+GRT R GS G + L ++
Sbjct: 419 VASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRA-GSHGASFTFLTADK 468
>TAIR|locus:2032338 [details] [associations]
symbol:AT1G71280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008266
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC016162
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
IPI:IPI00539204 PIR:E96737 RefSeq:NP_177284.1 UniGene:At.70351
ProteinModelPortal:Q9FVV4 SMR:Q9FVV4 PRIDE:Q9FVV4
EnsemblPlants:AT1G71280.1 GeneID:843469 KEGG:ath:AT1G71280
GeneFarm:1442 TAIR:At1g71280 InParanoid:Q9FVV4 OMA:NDASIVC
PhylomeDB:Q9FVV4 ArrayExpress:Q9FVV4 Genevestigator:Q9FVV4
Uniprot:Q9FVV4
Length = 465
Score = 313 (115.2 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+F LK + E+ ++A+ GF T +QA TIP L +D+V A TGSGKTLAFL+P
Sbjct: 16 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF 75
Query: 455 VELIYNLKFMPRNGTGI--IIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEA 512
+E+I P + +IISPTRELS Q V + + + R+ EA
Sbjct: 76 IEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVR---------LDFAKCREVEA 126
Query: 513 QKLA---KGINIIVATPGRLLDHLQNTPEFL-YKNLQCLIIDEADRILDIGFEEDMKQIV 568
+G N+++ TPGRL D ++ EFL ++NL+ LI+DEADR+LD+GF++ + I+
Sbjct: 127 DMNTLEEEGANLLIGTPGRLSDMMKRM-EFLDFRNLEILILDEADRLLDMGFQKQVNYII 185
Query: 569 NLLPKRRQTMLFS 581
+ LPK+R+T LFS
Sbjct: 186 SRLPKQRRTGLFS 198
Score = 149 (57.5 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 615 AGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYI----DLPVM 670
AGL Y+ C ++ ++VFF +C V + +++ I +
Sbjct: 211 AGLRNPYLKCEADQKSSQLVHLLIENKNKKLVVFFMTCACVDYWGLVISKIPSLKSISFF 270
Query: 671 CIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWI 714
HGK Q R T F A +G+LLCTDVAARGLDIP + +I
Sbjct: 271 PTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYI 314
Score = 63 (27.2 bits), Expect = 8.7e-40, Sum P(3) = 8.7e-40
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 796 GKEAFKAYVRAYDSHHLKQIFDIDTMDLGK 825
G +AF ++VRAY H IF +++GK
Sbjct: 328 GLKAFVSFVRAYKEHQCSYIFSWKGLEIGK 357
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 431 (156.8 bits), Expect = 8.8e-40, P = 8.8e-40
Identities = 113/347 (32%), Positives = 181/347 (52%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA-VELIYN-LKFMPRNG 468
I GF K T IQ++ P +L+G DL+G A+TG+GKTLA+L+P + L + R G
Sbjct: 68 IRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPIPKDKRGG 127
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYG--LIMGGASRQAEAQKLAKGINIIVATP 526
G+++++PTREL++Q V E +KY + + I GG R+A+ + KG++I++ATP
Sbjct: 128 PGMLVLAPTRELALQ---VEAECLKYTYKGFKSICIYGGGDRKAQINVVTKGVDIVIATP 184
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED-MKQIVNLLPKRRQTMLFSXXXX 585
GRL D LQ K++ L++DEADR+LD+GFE MK ++++ P R+ M+ +
Sbjct: 185 GRLND-LQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMMSATWPD 243
Query: 586 XXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
VY+G D V+G+ Y+ + V
Sbjct: 244 GVRRLAKSYLRNPMIVYVGTLDL----AVSGVVLKYLQFDKDIFTWKYMQVNAQSFCTDV 299
Query: 646 MVFFSSCMSVKFHHEL-LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
+V F V L +PV +HG ++Q R F + IL+ TD+A+R
Sbjct: 300 VVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDLASR 359
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
GLD+ + + +D P + +EY+HRVGRT R G +G A+ ++ ++
Sbjct: 360 GLDVHDITHVFNFDFPRNIEEYVHRVGRTGRA-GRTGKAVTLITKKD 405
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 430 (156.4 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 107/351 (30%), Positives = 179/351 (50%)
Query: 420 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRE 479
T IQ+ IP +L+G D +G AKTGSGKT+AF P + F G +I++PTRE
Sbjct: 25 TAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPF----GIFGLILTPTRE 80
Query: 480 LSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEF 539
L++Q L + +++GG + L + + ++ATPGRL DH+ N+ E
Sbjct: 81 LALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLADHILNSGEE 140
Query: 540 LYKNLQ---CLIIDEADRILDIGFEEDMKQIVNLLPK--RRQTMLFSXXXXXXXXXXXXX 594
L+ L++DEADR+L F D+++ ++LP +RQT+LF+
Sbjct: 141 TISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTSDKRQTLLFTATITDAVRALKEK 200
Query: 595 --XXXXXPVYIGVDDTKEEATVAG-LEQGYVVCPS--EXXXXXXXXXXXXXXXXXVMVFF 649
PV++ +T ++ + L+ YV PS + ++F
Sbjct: 201 PPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFKDSTAVIFV 260
Query: 650 SSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIP 709
+ + + +L +D V +H + Q +RT + +F IL+ TDVA+RGLDIP
Sbjct: 261 NRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIP 320
Query: 710 AVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
V+ ++ +D P DP ++IHRVGRTAR G G A+ I+ +++ ++ +++
Sbjct: 321 TVELVINFDIPADPDDFIHRVGRTARA-GRKGDAVSIIGEKDIDRIQSIEE 370
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 442 (160.7 bits), Expect = 1.2e-39, P = 1.2e-39
Identities = 121/368 (32%), Positives = 191/368 (51%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+FE G E +K+I GF K T IQ++ P +L+G DL+G A+TG+GKTL++L+P
Sbjct: 215 KFEDAFGPYPE-LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPG 273
Query: 455 VELIYNLKFMP-----RNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGG 505
+L P RNG G+++++PTREL++Q G E KY + GL I GG
Sbjct: 274 ---FIHLNSQPVSRGKRNGPGMLVLTPTRELALQV-GA--ECSKYSYK--GLKSVCIYGG 325
Query: 506 ASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED-M 564
+R+ + Q + KG++II+ATPGRL D LQ +++ L++DEAD++LD+GFE M
Sbjct: 326 GNRKGQIQDIMKGVDIIIATPGRLND-LQMNNFVNLRSITYLVLDEADKMLDLGFEHQIM 384
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
K ++++ P R+ M + VY+G D TV +Q ++
Sbjct: 385 KILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTV---KQNIIIT 441
Query: 625 PSEXXXXXXXXXXXXXX-XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTT 683
E V+VF S + L+ +PV +HG ++Q R
Sbjct: 442 TEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRER 501
Query: 684 TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
F + IL+ TD+A+RGLD+ V + Y+ P + +EY+HRVGRT R G G +
Sbjct: 502 ALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRA-GKMGES 560
Query: 744 LLILRPEE 751
+ ++ ++
Sbjct: 561 VTLMTQDD 568
>ASPGD|ASPL0000056064 [details] [associations]
symbol:AN0204 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AACD01000005
InterPro:IPR025313 Pfam:PF13959 KO:K14806 RefSeq:XP_657808.1
ProteinModelPortal:Q5BGX6 STRING:Q5BGX6
EnsemblFungi:CADANIAT00002528 GeneID:2875981 KEGG:ani:AN0204.2
HOGENOM:HOG000268799 OMA:RAYATHI OrthoDB:EOG4W6S47 Uniprot:Q5BGX6
Length = 778
Score = 292 (107.8 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 69/172 (40%), Positives = 107/172 (62%)
Query: 420 TEIQARTIPPLL-EGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG---------- 468
T IQ +I LL E D A+TGSGKTLA+L+P V+ I L G
Sbjct: 176 TAIQKASITQLLKEETDAFIQAETGSGKTLAYLLPLVQRIMALSRAKNEGDAKGDTSVHR 235
Query: 469 -TGI--IIISPTRELSMQTFGVLKELMKYHHHTY-GLIMGGASRQAEAQKLAKGINIIVA 524
+G+ II++PTREL Q VL+ L++ H G ++GG +++E +L KG+NI+VA
Sbjct: 236 DSGLFAIILAPTRELCKQISVVLEGLLRCAHWIVAGTVIGGEKKKSEKARLRKGLNILVA 295
Query: 525 TPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQ 576
TPGRL DHL+NT N++ L++DE DR++++GFE+++++I++ L R++
Sbjct: 296 TPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQEIISKLDARQR 347
Score = 223 (83.6 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 63/176 (35%), Positives = 97/176 (55%)
Query: 672 IHGKQKQMKRTTTFFQFC-NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRV 730
+HG Q RT+T F N + +L+CTDVA+RGLD+P VD +V+YDP E++HR+
Sbjct: 519 LHGSLPQHVRTSTLSSFAKNRDPSVLICTDVASRGLDLPNVDLVVEYDPAFSADEHLHRI 578
Query: 731 GRTARGEGSSGHALLILRPE-ELGFLRYLKQAKIPLNEFEFSWSKISDI----------- 778
GRTAR G G AL+ L P E ++ LK+ + + S DI
Sbjct: 579 GRTAR-LGRDGRALVFLLPGCEENYVEILKRGYRDGGK-ALTRSTTDDILKRGFGGNIES 636
Query: 779 ---QLQLEKLISKN-YFLNMSGKEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
QL+LE+ N +L M+ + A+++++RAY +H + + IF+I + LG +K
Sbjct: 637 QKWQLELERWALDNPEYLEMA-RRAYQSHIRAYATHVANERHIFNIKELHLGHLAK 691
Score = 37 (18.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 647 VFFSSCM-SVKFHHEL 661
+ F SC SV FH E+
Sbjct: 446 IIFVSCADSVNFHFEV 461
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 319 (117.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 74/171 (43%), Positives = 109/171 (63%)
Query: 416 FTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN-GTGIIII 474
F K T IQ+ + P + GRD++ AKTGSGKTLAF++PA+ I R G ++++
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVL 208
Query: 475 SPTRELSMQTFGVLKELMKYHHHTYGLIM----GGASRQAEAQKLAKGINIIVATPGRLL 530
PTREL+ Q ++E+ H+ GL M GGAS+ +A+ L +G++I+VATPGRLL
Sbjct: 209 LPTRELAQQ----VQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLL 264
Query: 531 DHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
D L N + K L++DEADR+LD+GFE +K+I+ + RQT++FS
Sbjct: 265 DFLDNGTTNM-KKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFS 314
Score = 178 (67.7 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P +CIHG + Q +R +F +T I+L TDVAARGLD+ + +++ YD P++ ++Y+
Sbjct: 402 PTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYV 461
Query: 728 HRVGRTARGE 737
HR+GRT R +
Sbjct: 462 HRIGRTGRSD 471
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 429 (156.1 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 97/345 (28%), Positives = 173/345 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL-KFMPR 466
+KA+ ++G+ T IQ + IP +L G++++ +A+TG+GKT +F++P + + K P+
Sbjct: 13 VKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRPK 72
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
II+ +PTREL++Q + + KY T + GG + ++L +G++++VATP
Sbjct: 73 RVRSIIL-TPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVDLLVATP 131
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLD + + + L++DEADR+LD+GF ED+ I+ LP++RQ +LFS
Sbjct: 132 GRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFSATLSK 190
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P I ++ +++ A ++Q + +
Sbjct: 191 QVKALAKTAI---PDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLIKENNWAQAL 247
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F + L + H + Q R F + L+ T V +RG+
Sbjct: 248 IFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGI 307
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
DI A++ ++ YD PD+ +YIHR+GRT R G+ G A+ + ++
Sbjct: 308 DIDALERVINYDLPDEADDYIHRIGRTGRA-GNQGEAISFVSKDD 351
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 429 (156.1 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 97/345 (28%), Positives = 173/345 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL-KFMPR 466
+KA+ ++G+ T IQ + IP +L G++++ +A+TG+GKT +F++P + + K P+
Sbjct: 13 VKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHRFADAPKIRPK 72
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
II+ +PTREL++Q + + KY T + GG + ++L +G++++VATP
Sbjct: 73 RVRSIIL-TPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGVDLLVATP 131
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLLD + + + L++DEADR+LD+GF ED+ I+ LP++RQ +LFS
Sbjct: 132 GRLLD-MYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLFSATLSK 190
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVM 646
P I ++ +++ A ++Q + +
Sbjct: 191 QVKALAKTAI---PDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLIKENNWAQAL 247
Query: 647 VFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGL 706
+F + L + H + Q R F + L+ T V +RG+
Sbjct: 248 IFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGI 307
Query: 707 DIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
DI A++ ++ YD PD+ +YIHR+GRT R G+ G A+ + ++
Sbjct: 308 DIDALERVINYDLPDEADDYIHRIGRTGRA-GNQGEAISFVSKDD 351
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 444 (161.4 bits), Expect = 1.6e-39, P = 1.6e-39
Identities = 128/398 (32%), Positives = 211/398 (53%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA---VE---LIYNLKFM 464
I GF K T IQ++ P +L+G DL+G A+TG+GKTL++L+P V+ ++++L+
Sbjct: 256 IKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQPVVFSLQ-R 314
Query: 465 PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQKLAKGIN 520
RNG G+++++PTREL++Q V E KY + GL + GG R + + L KG++
Sbjct: 315 ARNGPGMLVLTPTRELALQ---VEAECSKYSYK--GLKSVCVYGGGDRDGQIKDLLKGVD 369
Query: 521 IIVATPGRLLDHLQNTPEFLY-KNLQCLIIDEADRILDIGFEED-MKQIVNLLPKRRQTM 578
II+ATPGRL D N F+Y K++ L++DEAD++LD+GFE MK ++++ P R+ M
Sbjct: 370 IIIATPGRLNDLQMNN--FVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIRPDRQTVM 427
Query: 579 LFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXX 638
+ VY+G D +TV +Q +V +
Sbjct: 428 TSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTV---KQNIIVTTEDEKRSHIQTFIE 484
Query: 639 XXXXXXVMVFFSSCMSVKFHHEL-LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
++ F S +V H L + V +HG ++Q R F + IL+
Sbjct: 485 SMSPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILI 544
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL-LILRPE-ELG-- 753
TD+A+RGLD+ V + YD P + +EY+HRVGRT R G +G ++ LI R + ++
Sbjct: 545 ATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRA-GRTGVSITLITRSDWKIAGE 603
Query: 754 FLRYLKQAK--IPLNEFEFSWS-KISDIQLQLEKLISK 788
+ L++A IP + E + K + ++ ++EK + +
Sbjct: 604 LIHILERANQSIPEDLVEMAERYKANKLKKEMEKKLGR 641
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 442 (160.7 bits), Expect = 1.7e-39, P = 1.7e-39
Identities = 121/368 (32%), Positives = 191/368 (51%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
+FE G E +K+I GF K T IQ++ P +L+G DL+G A+TG+GKTL++L+P
Sbjct: 224 KFEDAFGPYPE-LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPG 282
Query: 455 VELIYNLKFMP-----RNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGG 505
+L P RNG G+++++PTREL++Q G E KY + GL I GG
Sbjct: 283 ---FIHLNSQPVSRGKRNGPGMLVLTPTRELALQV-GA--ECSKYSYK--GLKSVCIYGG 334
Query: 506 ASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED-M 564
+R+ + Q + KG++II+ATPGRL D LQ +++ L++DEAD++LD+GFE M
Sbjct: 335 GNRKGQIQDIMKGVDIIIATPGRLND-LQMNNFVNLRSITYLVLDEADKMLDLGFEHQIM 393
Query: 565 KQIVNLLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC 624
K ++++ P R+ M + VY+G D TV +Q ++
Sbjct: 394 KILLDVRPDRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTV---KQNIIIT 450
Query: 625 PSEXXXXXXXXXXXXXX-XXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTT 683
E V+VF S + L+ +PV +HG ++Q R
Sbjct: 451 TEEEKRSLFQEFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRER 510
Query: 684 TFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
F + IL+ TD+A+RGLD+ V + Y+ P + +EY+HRVGRT R G G +
Sbjct: 511 ALDDFKTGKVKILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRA-GKMGES 569
Query: 744 LLILRPEE 751
+ ++ ++
Sbjct: 570 VTLMTQDD 577
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 316 (116.3 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 163
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 164 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 223
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 224 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277
Score = 185 (70.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 365 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 424
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 425 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 454
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 316 (116.3 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 163
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 164 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 223
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 224 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277
Score = 185 (70.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 365 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 424
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 425 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 454
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 316 (116.3 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 163
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 164 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 223
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 224 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 277
Score = 185 (70.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 365 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 424
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 425 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 454
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 440 (159.9 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 122/374 (32%), Positives = 180/374 (48%)
Query: 402 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP----AVEL 457
K + L +A G T IQ + +P +L GRDL+G A TGSGKTL F++P A+E
Sbjct: 183 KFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQ 242
Query: 458 IYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYG-------LIMGGASRQA 510
Y+L F G +II P+REL+ QT +++ K H G L MGG
Sbjct: 243 EYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSK-HLQACGMPEIRSCLAMGGLPVSE 301
Query: 511 EAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNL-QCLIIDEADRILDIGFEEDMKQIVN 569
+++G++I+VATPGRL+D L + L ++ + L +DEADR++D+GFEED++ I +
Sbjct: 302 ALDVISRGVHIVVATPGRLMDMLDK--KILTLDMCRYLCMDEADRMIDMGFEEDVRTIFS 359
Query: 570 LLPKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXX 629
+RQT+LFS PV I V + + YV +
Sbjct: 360 FFKGQRQTLLFSATMPKKIQNFARSALVK-PVTINVGRAGAASMNVTQQVEYV---KQEA 415
Query: 630 XXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFC 689
V++F V HE L + + IHG + Q +R+ +
Sbjct: 416 KVVYLLDCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYR 475
Query: 690 NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRP 749
+ +L+ TDVA++GLD P V ++ YD PDD + Y+HR+GRT R LI +
Sbjct: 476 VGKKDVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKT 535
Query: 750 EELGFLRYLKQAKI 763
E L LK I
Sbjct: 536 TEQSVLLDLKHLLI 549
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 442 (160.7 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 105/338 (31%), Positives = 178/338 (52%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
+ + GF+ + IQA++ P ++ RD+V AKTGSGKTL +L+P + + R G
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMG 301
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
I+++SPTREL+ Q + K + + GGA + + +++ +G++I+VATPGR
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGR 361
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L D L+ L++ + L++DEADR+LD+GFE +++IVN +P +RQT++++
Sbjct: 362 LNDILEMKRISLHQ-VSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEV 420
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGY-VVCPSEXXXXXXXXXXXXXXXXXVMV 647
P + + + E + Q V+ P E +++
Sbjct: 421 RKIAADLLVN-PAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIII 479
Query: 648 FFSSCMSVKFHHELLNYID--LPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
F C + + +L + IHG + Q +R QF + T +L+ TDVAARG
Sbjct: 480 F---CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARG 536
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
LD+ + +V YD P+ ++Y+HR+GRT R G++G A
Sbjct: 537 LDVKDIRVVVNYDFPNGVEDYVHRIGRTGRA-GATGLA 573
Score = 47 (21.6 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 16 GGKYPP---SYEC---PTPLLVSVSNFCPFA-SF 42
GG+ PP S+E P LL NF P+A SF
Sbjct: 153 GGQVPPPLMSFEATGLPNELLRECPNFMPYALSF 186
Score = 42 (19.8 bits), Expect = 6.8e-39, Sum P(2) = 6.8e-39
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 77 NVPSIWESLLDRIVAELTVYPPES 100
N+P W+ L+D L + PE+
Sbjct: 16 NLPKPWKGLVDSRTGYLYFWNPET 39
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 443 (161.0 bits), Expect = 2.0e-39, P = 2.0e-39
Identities = 120/355 (33%), Positives = 190/355 (53%)
Query: 402 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA-VELIY- 459
+V EN KA GF K T IQ++ P +L+G DL+G A+TG+GKTL +L+P + L+
Sbjct: 252 EVMENIKKA----GFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQ 307
Query: 460 -NLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQK 514
+LK RN G+++++PTREL++Q G E KY + GL + GG +R + ++
Sbjct: 308 PSLKGQ-RNRPGMLVLTPTRELALQVEG---ECCKYSYK--GLRSVCVYGGGNRDEQIEE 361
Query: 515 LAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEED-MKQIVNLLPK 573
L KG++II+ATPGRL D LQ + KN+ L++DEAD++LD+GFE MK ++++ P
Sbjct: 362 LKKGVDIIIATPGRLND-LQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPD 420
Query: 574 RRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXX 633
R+ M + VY+G T + V+ ++Q +V E
Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVG---TLDLVAVSSVKQNIIVTTEEEKWSHM 477
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHEL-LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAE 692
++ F S +V H L ++ V +HG ++Q R F +
Sbjct: 478 QTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGK 537
Query: 693 TGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
IL+ TD+A+RGLD+ V + +D P + +EY+HR+GRT R G +G ++ L
Sbjct: 538 VRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRA-GRTGVSITTL 591
>CGD|CAL0000117 [details] [associations]
symbol:DBP7 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000117 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
EMBL:AP006852 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 EMBL:AACQ01000156
RefSeq:XP_712474.1 RefSeq:XP_888745.1 ProteinModelPortal:Q59S50
STRING:Q59S50 GeneID:3645903 GeneID:3704147 KEGG:cal:CaO19.6902
KEGG:cal:CaO19_6902 KO:K14806 Uniprot:Q59S50
Length = 727
Score = 322 (118.4 bits), Expect = 2.4e-39, Sum P(4) = 2.4e-39
Identities = 69/157 (43%), Positives = 103/157 (65%)
Query: 416 FTKMTEIQARTIPPLLEGR-DLVGSAKTGSGKTLAFLVPAV-ELIYNLKFMPRNGTGI-- 471
F T+IQ IP L+ DL A+TGSGKTLAF++P +L+ KF +G+
Sbjct: 156 FMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKLMRENKFKINRESGLFA 215
Query: 472 IIISPTRELSMQTFGVLKELMKYHHHTY-GLIMGGASRQAEAQKLAKGINIIVATPGRLL 530
II++PTREL+ Q +GVL+ L + HH G+++GG +++E +L KG NI+VATPGRL
Sbjct: 216 IILTPTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILVATPGRLA 275
Query: 531 DHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQI 567
DHL+NT L+ L++DE D+++++GFE+ + QI
Sbjct: 276 DHLENTKTLDISQLRWLVLDEGDKLMELGFEDTIAQI 312
Score = 173 (66.0 bits), Expect = 2.4e-39, Sum P(4) = 2.4e-39
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 672 IHGKQKQMKRTTTFFQFC---NAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIH 728
+HG Q R +T F N+ IL CTDVA+RGLD+P V +++YDPP +++H
Sbjct: 487 LHGSLSQQTRASTLQSFVKDNNSYNKILFCTDVASRGLDLPNVANVIEYDPPFTIDDHLH 546
Query: 729 RVGRTARGEGSSGHALLILRPE-ELGFL 755
R+GR+AR G+ G+A L L P E G++
Sbjct: 547 RIGRSAR-LGNEGNATLFLLPGIEEGYV 573
Score = 50 (22.7 bits), Expect = 2.4e-39, Sum P(4) = 2.4e-39
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 780 LQLEKLISKNYFLNMSGKEAFKAYVRAYDSH--HLKQIFDIDTMDLGKDSK 828
L +E+ + ++ + AF +++RAY +H ++ F++ + LG +K
Sbjct: 624 LDVERWLLEDQASHDEAVRAFTSHIRAYATHLSSEREFFNVKLLHLGHLAK 674
Score = 39 (18.8 bits), Expect = 2.4e-39, Sum P(4) = 2.4e-39
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 646 MVFFSSCMSVKFHHEL 661
+VFFS SV FH ++
Sbjct: 423 IVFFSCSDSVDFHFDV 438
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 439 (159.6 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 117/346 (33%), Positives = 173/346 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV----ELIYNLKF 463
L+ + G T IQ + IP +L GRD++G A TGSGKTL F +P + E L F
Sbjct: 192 LRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF 251
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLK---ELMKYHHHTY---GLIMGGASRQAEAQKLAK 517
R G +II P+REL+ QT G+L+ L++ L +GG S + + + +
Sbjct: 252 SKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETMRH 311
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++I+VATPGRL+D LQ L + L +DEADR++D+GFE D++ I + +RQT
Sbjct: 312 GVHIMVATPGRLMDLLQKKMVSL-DICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT 370
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS PV I V + E YV E
Sbjct: 371 LLFSATMPKKIQNFAKSALVK-PVTINVGRAGAASLDVIQEVEYV---KEEAKMVYLLEC 426
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V++F V HE L + + IHG + Q +RT F + +L+
Sbjct: 427 LQKTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLV 486
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
TDVA++GLD PA+ ++ YD P++ + Y+HR+GRT R G++G A
Sbjct: 487 ATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRS-GNTGIA 531
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 316 (116.3 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 242
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 243 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 302
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 303 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 356
Score = 185 (70.2 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 444 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 503
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 504 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 533
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 316 (116.3 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 242
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 243 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 302
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 303 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 356
Score = 185 (70.2 bits), Expect = 3.1e-39, Sum P(2) = 3.1e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 444 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 503
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 504 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 533
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 316 (116.3 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 244
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 245 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 304
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 305 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 358
Score = 185 (70.2 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 446 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 505
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 506 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 535
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 316 (116.3 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 69/175 (39%), Positives = 110/175 (62%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 244
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K I GGA + + + L +G+ I +ATP
Sbjct: 245 DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP 304
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L++ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 305 GRLIDFLESGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 358
Score = 185 (70.2 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 446 PAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 505
Query: 728 HRVGRTARGEGSSGHALLILRPEELGFLRYL 758
HR+GRTAR + G A P L R L
Sbjct: 506 HRIGRTARST-NKGTAYTFFTPGNLKQAREL 535
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 425 (154.7 bits), Expect = 4.0e-39, P = 4.0e-39
Identities = 111/354 (31%), Positives = 173/354 (48%)
Query: 411 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTG 470
IA G+ T IQA+ IP ++ GRD++G A+TG+GKT AF +P +++ L+ R
Sbjct: 16 IAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALP---ILHRLQQGERGRVR 72
Query: 471 IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLL 530
++I+PTREL+ Q L + + GG + QKL G ++VA PGRLL
Sbjct: 73 ALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVACPGRLL 132
Query: 531 DHL-QNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXX 589
DH+ Q T + L+ L++DEAD++ D+GF D+++++ LP RRQT+LFS
Sbjct: 133 DHIAQGTIDL--SRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMPIDIR 190
Query: 590 XXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXX--XXXXXXXXXXXXVMV 647
PV + V TVA + + P E V++
Sbjct: 191 TLAQDILVD-PVTVQVGTVAPAVTVA-----HALYPVEQHLKTPLLLELLRHTDTESVLI 244
Query: 648 FFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLD 707
F + K E L + G Q +R F + IL+ TD+AARG+D
Sbjct: 245 FTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGID 304
Query: 708 IPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQA 761
+ V ++ YD PD + YIHR+GRT R SG A ++ ++ +R ++++
Sbjct: 305 VSQVSHVINYDIPDTAEAYIHRIGRTGRA-ARSGDAFTLVTSDDGAMVRAIERS 357
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 334 (122.6 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 75/178 (42%), Positives = 116/178 (65%)
Query: 406 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI--YNLKF 463
N LKAIA GF+ T IQ +TIP ++E +D+VG A+TGSGKT AF++P +E + ++ KF
Sbjct: 101 NLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKF 160
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIV 523
R +I+SP+REL++QT V+KEL K L++GG S + + +A +I++
Sbjct: 161 GARG----LILSPSRELALQTLKVVKELGKGTDLKSVLLVGGDSLEEQFGMMAGNPDIVI 216
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
ATPGR L HL+ +++ ++ DEADR+ ++GF + +I++ LP RQT+LFS
Sbjct: 217 ATPGRFL-HLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTRQTLLFS 273
Score = 168 (64.2 bits), Expect = 5.4e-39, Sum P(2) = 5.4e-39
Identities = 39/110 (35%), Positives = 59/110 (53%)
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
+VF ++ V + + LL V ++G Q R F + IL+ TDVAARG
Sbjct: 377 IVFAATKHHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAARG 436
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
+DIP + ++ YD P PK ++HRVGRTAR G G + ++R + +L
Sbjct: 437 IDIPILANVINYDFPSQPKIFVHRVGRTARA-GRKGWSYSLVRDADAPYL 485
>UNIPROTKB|Q8EI96 [details] [associations]
symbol:srmB "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 423 (154.0 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 116/374 (31%), Positives = 182/374 (48%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
QFE + + + L+++ MG T IQ T+P LE RD++ A TG+GKT +FL+PA
Sbjct: 2 QFEDFQ--LDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPA 59
Query: 455 VELIYNLKFMPRNGTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
++ + + PR +G ++I++PTREL+ Q L +I GG +
Sbjct: 60 LQHLIDF---PRRYSGQARVLILTPTRELASQIHRYACHLATDQGLNIAIITGGVPYAPQ 116
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+ L I+I+VATPGRL+++L +F +++ LIIDEADR+LD+GF +K I
Sbjct: 117 EEALKGNIDILVATPGRLMEYLDKG-KFSAESVDILIIDEADRMLDMGFSAVVKAIALEA 175
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQG-YVVCPSEXXX 630
R+Q MLFS P+ I VD ++E A + Q ++ +
Sbjct: 176 QGRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEK--AKIHQWIHLADDKDHKF 233
Query: 631 XXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCN 690
+VF + V L +P + G +Q KR +F
Sbjct: 234 ALLCHLLKQEDVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTK 293
Query: 691 AETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 750
E +LL TDVAARG+DI + ++ +D P YIHR+GRT R G+ G A+ +
Sbjct: 294 GEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRA-GAKGTAISLAEAH 352
Query: 751 ELGFL----RYLKQ 760
++ + RY++Q
Sbjct: 353 DMRIVGKIERYIEQ 366
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 423 (154.0 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 102/341 (29%), Positives = 172/341 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
++ +A +G+ K T IQ + IP +L+GRDL+ +A+TG+GKT +F++P +E + + +
Sbjct: 13 VQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKK 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQKLAKGINIIV 523
+I+ PTREL+MQ V +++ +Y T GL + GG QA+ Q+L G++++V
Sbjct: 73 RVRALILVPTRELAMQ---VAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQRLIDGVDVLV 128
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
ATPGRL+D L ++ ++ +++DEADR+LD+GF E + +I++ LP Q +LFS
Sbjct: 129 ATPGRLMD-LYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSAT 187
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P I + +A+ + + Q + +
Sbjct: 188 LSRKVRELAKTAVRD-PHEISI--AANQASKSNISQWLITVDKDTKSALLSHLINEQQWD 244
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++F + L + H + Q R F + + L+ T VAA
Sbjct: 245 QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAA 304
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
RG+DI + +V YD P EY+HR+GRT R E + G A+
Sbjct: 305 RGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAE-AVGEAI 344
>TIGR_CMR|SO_0947 [details] [associations]
symbol:SO_0947 "ATP-dependent RNA helicase SrmB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
HOGENOM:HOG000268807 KO:K05590 ProtClustDB:PRK11192
RefSeq:NP_716576.1 ProteinModelPortal:Q8EI96 GeneID:1168793
KEGG:son:SO_0947 PATRIC:23521551 Uniprot:Q8EI96
Length = 420
Score = 423 (154.0 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 116/374 (31%), Positives = 182/374 (48%)
Query: 395 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 454
QFE + + + L+++ MG T IQ T+P LE RD++ A TG+GKT +FL+PA
Sbjct: 2 QFEDFQ--LDPSLLESLKAMGHLSPTTIQQETLPHALEQRDILARAPTGTGKTASFLLPA 59
Query: 455 VELIYNLKFMPRNGTG---IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAE 511
++ + + PR +G ++I++PTREL+ Q L +I GG +
Sbjct: 60 LQHLIDF---PRRYSGQARVLILTPTRELASQIHRYACHLATDQGLNIAIITGGVPYAPQ 116
Query: 512 AQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLL 571
+ L I+I+VATPGRL+++L +F +++ LIIDEADR+LD+GF +K I
Sbjct: 117 EEALKGNIDILVATPGRLMEYLDKG-KFSAESVDILIIDEADRMLDMGFSAVVKAIALEA 175
Query: 572 PKRRQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQG-YVVCPSEXXX 630
R+Q MLFS P+ I VD ++E A + Q ++ +
Sbjct: 176 QGRKQNMLFSATLEGSGVIRFAREVLNDPIEIDVDAPRKEK--AKIHQWIHLADDKDHKF 233
Query: 631 XXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCN 690
+VF + V L +P + G +Q KR +F
Sbjct: 234 ALLCHLLKQEDVKRAIVFVKTRDVVSSLEGQLLQAGIPCAFMRGDMEQKKRFQALSRFTK 293
Query: 691 AETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPE 750
E +LL TDVAARG+DI + ++ +D P YIHR+GRT R G+ G A+ +
Sbjct: 294 GEVNVLLATDVAARGIDIDDISHVINFDMPRSADTYIHRIGRTGRA-GAKGTAISLAEAH 352
Query: 751 ELGFL----RYLKQ 760
++ + RY++Q
Sbjct: 353 DMRIVGKIERYIEQ 366
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 423 (154.0 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 102/341 (29%), Positives = 172/341 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 467
++ +A +G+ K T IQ + IP +L+GRDL+ +A+TG+GKT +F++P +E + + +
Sbjct: 13 VQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKK 72
Query: 468 GTGIIIISPTRELSMQTFGVLKELMKYHHHTYGL----IMGGASRQAEAQKLAKGINIIV 523
+I+ PTREL+MQ V +++ +Y T GL + GG QA+ Q+L G++++V
Sbjct: 73 RVRALILVPTRELAMQ---VAEKVEQYGKDT-GLKSLAVFGGVDEQAQKQRLIDGVDVLV 128
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
ATPGRL+D L ++ ++ +++DEADR+LD+GF E + +I++ LP Q +LFS
Sbjct: 129 ATPGRLMD-LYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSAT 187
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
P I + +A+ + + Q + +
Sbjct: 188 LSRKVRELAKTAVRD-PHEISI--AANQASKSNISQWLITVDKDTKSALLSHLINEQQWD 244
Query: 644 XVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAA 703
++F + L + H + Q R F + + L+ T VAA
Sbjct: 245 QALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAA 304
Query: 704 RGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHAL 744
RG+DI + +V YD P EY+HR+GRT R E + G A+
Sbjct: 305 RGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAE-AVGEAI 344
>ZFIN|ZDB-GENE-031113-10 [details] [associations]
symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
Uniprot:B1H1J4
Length = 759
Score = 443 (161.0 bits), Expect = 6.8e-39, P = 6.8e-39
Identities = 114/369 (30%), Positives = 188/369 (50%)
Query: 402 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL 461
++ NT+K + G + + +IQ +T + +G+DL+G A+TG+GKT +F VP VE + +
Sbjct: 172 RISPNTIKLLQARGVSYLFDIQVKTFNAVYDGKDLIGQARTGTGKTFSFAVPLVEKLQSG 231
Query: 462 KFMPRNGTG--IIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGI 519
R G +++++PTREL++Q K++ + T GG+S + + GI
Sbjct: 232 DQERRRGRPPKVLVLAPTRELAIQVTKDFKDITRKLSVT--CFYGGSSYNPQIDAIRSGI 289
Query: 520 NIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRR---- 575
+++V TPGR+ DHLQN L LQ +++DE D++LD+GF E +++I++ K+
Sbjct: 290 DVLVGTPGRIRDHLQNNKLDL-SQLQHVVLDEVDQMLDMGFAEQVEEILSASYKKDAEQK 348
Query: 576 -QTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCP-SEXXXXXX 633
QT+LFS +++ + K + +E + C S+
Sbjct: 349 PQTLLFSATCPSWVYDVAKKYMRSQFIHVDLIGKKTQKAATTVEHLAIACHWSQRASVIG 408
Query: 634 XXXXXXXXXXXVMVFFSSCMSVKFHHEL-LNY-IDLPVMCIHGKQKQMKRTTTFFQFCNA 691
+ F C + K EL LN I +HG Q +R T F N
Sbjct: 409 DVIQVYSGSHGRTIVF--CETKKEATELSLNTSIKQSAQSLHGDIPQKQREVTLKGFRNG 466
Query: 692 ETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEE 751
+L+ T+VAARGLDIP VD ++Q PP+D + YIHR GRT R G +G + + +E
Sbjct: 467 SFEVLVATNVAARGLDIPEVDLVIQSSPPNDVESYIHRSGRTGRA-GRTGICICFYQRKE 525
Query: 752 LGFLRYLKQ 760
L++++Q
Sbjct: 526 ESQLKFVEQ 534
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 443 (161.0 bits), Expect = 9.6e-39, P = 9.6e-39
Identities = 113/347 (32%), Positives = 177/347 (51%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
K + G+ T IQ +TIP +L GRD+V A+TGSGKT FL+P E LK +G
Sbjct: 49 KGVMKKGYKVPTPIQRKTIPVILRGRDVVAMARTGSGKTACFLLPMFE---RLKAPSPSG 105
Query: 469 TGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGR 528
+I+SPTREL++QT KEL K+ L++GG + + L + +II+ATPGR
Sbjct: 106 ARALILSPTRELALQTLKFTKELGKFTGLKTALVLGGDKMEDQFAALHENPDIIIATPGR 165
Query: 529 LLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXX 588
L+ H+ ++++ ++ DEADR+ ++GF E +++I+ LP QT+LFS
Sbjct: 166 LV-HVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEILARLPGSHQTVLFSATLPKLL 224
Query: 589 XXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVF 648
P+ I +D + + L +V + +VF
Sbjct: 225 VEFARAGLTE-PMLIRLDVESKLSEQLKLAFFHVRGDDKPAVLLHLLRCVVKPQDQTVVF 283
Query: 649 FSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDI 708
++ ++ ELL + I+ Q R +F + + +LL TDVAARGLDI
Sbjct: 284 VATKHHTEYLKELLTSQGICCTHIYSSLDQTARKINIAKFAHGKCQVLLVTDVAARGLDI 343
Query: 709 PAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
P +D ++ Y P K ++HRVGR AR G SG A ++ P+E+ ++
Sbjct: 344 PMLDNVINYSFPAKSKLFLHRVGRVARA-GRSGTAYSLVAPDEMPYI 389
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 437 (158.9 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 113/345 (32%), Positives = 178/345 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
++ I GF K T IQ++ P +L+G DL+G A+TG+GKTL++L+P I + + R
Sbjct: 253 MRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQPVLQRA 312
Query: 467 -NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVAT 525
NG G+++++PTREL++Q E Y I GG R + + L+KG +II+AT
Sbjct: 313 RNGPGMLVLTPTRELALQVDAECSEY-SYRGLKSVCIYGGGDRDGQIKDLSKGADIIIAT 371
Query: 526 PGRLLDHLQNTPEFLY-KNLQCLIIDEADRILDIGFEED-MKQIVNLLPKRRQTMLFSXX 583
PGRL D N F+Y K++ L++DEAD++LD+GFE MK ++++ P R+ M +
Sbjct: 372 PGRLHDLQMNN--FVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSATW 429
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXX 643
VY+G D +TV Q +V +
Sbjct: 430 PYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVT---QNIIVTTEDEKRSHIQAFIDSMSPK 486
Query: 644 XVMVFFSSCMSVKFHHEL-LNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
++ F S +V H L + V +HG ++Q R F + IL+ TD+A
Sbjct: 487 DKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLA 546
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLIL 747
+RGLD+ V + YD P + +EY+HRVGRT R G +G ++ ++
Sbjct: 547 SRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRA-GRTGVSITLI 590
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 442 (160.7 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 115/356 (32%), Positives = 179/356 (50%)
Query: 405 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 464
E +KA+ +T+ T IQA+ +P L GRD++G AKTGSGKT AF+ P + + + K +
Sbjct: 278 EQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQL 337
Query: 465 -PRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIV 523
P +G +I++PTRELS+Q + K+ K ++ GG S+ +++ L +G IIV
Sbjct: 338 KPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIV 397
Query: 524 ATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXX 583
ATPGR++D ++ L + + L++DEADR+ +GFE ++ I N + RQ ++FS
Sbjct: 398 ATPGRMIDMVKMKATNL-RRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSAT 456
Query: 584 XXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC-PSEXXXXXXXXXXXXXXX 642
PV I V EA + YV P +
Sbjct: 457 FKKRIERLARDVLSD-PVRI-VQGDLNEANQDITQSVYVFPNPLQKWNWLLCHLVKFLSE 514
Query: 643 XXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVA 702
V++F + + + L + + +HG Q R QF E IL+ TDVA
Sbjct: 515 GSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVA 574
Query: 703 ARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYL 758
ARGLDIP + +V YD D + + HR+GRT R G G+A ++ ++ F +L
Sbjct: 575 ARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRA-GEKGNAYTLVTDKDKEFAGHL 629
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 433 (157.5 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 113/346 (32%), Positives = 173/346 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV----ELIYNLKF 463
L+ + G + T IQ + IP +L GRD++G A TGSGKTL F +P + E L F
Sbjct: 189 LRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF 248
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTY------GLIMGGASRQAEAQKLAK 517
R G +II P+REL+ QT G+++ + L +GG S + + + +
Sbjct: 249 SKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKH 308
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VATPGRL+D LQ L + L +DEADR++D+GFE D++ I + +RQT
Sbjct: 309 GVHMMVATPGRLMDLLQKKMVSL-DICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT 367
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS P+ I V + E YV E
Sbjct: 368 LLFSATMPKKIQNFAKSALVK-PITINVGRAGAASLDVVQEVEYV---KEEAKMVYLLEC 423
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V++F V HE L + + IHG + Q +RT F + + +L+
Sbjct: 424 LQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLV 483
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
TDVA++GLD PA+ ++ YD P++ + Y+HR+GRT R G++G A
Sbjct: 484 ATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRS-GNTGIA 528
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 434 (157.8 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 116/346 (33%), Positives = 173/346 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV----ELIYNLKF 463
L+ + G T IQ + IP +L GRD++G A TGSGKTL F +P + E L F
Sbjct: 193 LRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF 252
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLK---ELMKYHHHTY---GLIMGGASRQAEAQKLAK 517
R G +II P+REL+ QT G+L+ L++ L +GG S + + + +
Sbjct: 253 SKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH 312
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VATPGRL+D LQ L + L +DEADR++D+GFE D++ I + +RQT
Sbjct: 313 GVHMMVATPGRLMDLLQKKMVSL-DICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT 371
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS PV I V + E YV E
Sbjct: 372 LLFSATMPKKIQNFAKSALVK-PVTINVGRAGAASLDVIQEVEYV---KEEAKMVYLLEC 427
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V++F V HE L + + IHG + Q +RT F + +L+
Sbjct: 428 LQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLV 487
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
TDVA++GLD PA+ ++ YD P++ + Y+HR+GRT R G++G A
Sbjct: 488 ATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRS-GNTGIA 532
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 434 (157.8 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 116/346 (33%), Positives = 173/346 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV----ELIYNLKF 463
L+ + G T IQ + IP +L GRD++G A TGSGKTL F +P + E L F
Sbjct: 193 LRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF 252
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLK---ELMKYHHHTY---GLIMGGASRQAEAQKLAK 517
R G +II P+REL+ QT G+L+ L++ L +GG S + + + +
Sbjct: 253 SKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH 312
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VATPGRL+D LQ L + L +DEADR++D+GFE D++ I + +RQT
Sbjct: 313 GVHMMVATPGRLMDLLQKKMVSL-DICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT 371
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS PV I V + E YV E
Sbjct: 372 LLFSATMPKKIQNFAKSALVK-PVTINVGRAGAASLDVIQEVEYV---KEEAKMVYLLEC 427
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V++F V HE L + + IHG + Q +RT F + +L+
Sbjct: 428 LQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLV 487
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
TDVA++GLD PA+ ++ YD P++ + Y+HR+GRT R G++G A
Sbjct: 488 ATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRS-GNTGIA 532
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 303 (111.7 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 67/175 (38%), Positives = 108/175 (61%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
+ + F + T IQA+ P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 107 MDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG 166
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G ++++PTREL+ Q V + K + GGA + + + L +G+ I +ATP
Sbjct: 167 DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATP 226
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFS 581
GRL+D L+ L + L++DEADR+LD+GFE +++IV+ + RQT+++S
Sbjct: 227 GRLIDFLEVGKTNL-RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWS 280
Score = 191 (72.3 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 668 PVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYI 727
P MCIHG + Q +R +F + + IL+ TDVA+RGLD+ V +++ YD P+ ++Y+
Sbjct: 368 PAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYV 427
Query: 728 HRVGRTARGEGSSGHALLILRPEEL----GFLRYLKQAKIPLN 766
HR+GRTAR + G A P L +R L++A+ +N
Sbjct: 428 HRIGRTARST-NKGTAYTFFTPGNLRQARDLVRVLEEARQAIN 469
>ASPGD|ASPL0000072637 [details] [associations]
symbol:AN4903 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BN001303 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACD01000084 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 RefSeq:XP_662507.1 ProteinModelPortal:Q5B3H7
EnsemblFungi:CADANIAT00005498 GeneID:2872706 KEGG:ani:AN4903.2
HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW Uniprot:Q5B3H7
Length = 525
Score = 420 (152.9 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 125/434 (28%), Positives = 208/434 (47%)
Query: 384 SLSIPSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTG 443
+L I F+AL V + ++ M K T IQ IP +L+GRD +G ++TG
Sbjct: 85 ALEIGLNAEENSFKALN--VAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTG 142
Query: 444 SGKTLAFLVPAVELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIM 503
SGKT+AF VP ++ F G +I++PTREL++Q F +K + LI
Sbjct: 143 SGKTIAFSVPILQKWAEDPF----GIFAVILTPTRELALQIFEQIKAISAPQSMKPVLIT 198
Query: 504 GGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLY---KNLQCLIIDEADRILDIG- 559
GG +++A +LA +++VATPGRL DH+ + K ++ +++DEADR+L G
Sbjct: 199 GGTDMRSQAIELAGRPHVVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGP 258
Query: 560 --FEEDMKQIVNLLP--KRRQTMLFSXXXXXXXXXXXXXXXXXX--PVYIGVDDTKEEAT 613
D++ ++ LP +RQT+LF+ P+++ T+ + T
Sbjct: 259 GSMLPDVETCLSFLPGPSQRQTLLFTATLTPEVRALKSMPQTPGKPPIFVTEISTEAKDT 318
Query: 614 VAG-LEQGYVVCP--SEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVM 670
V L YV P +VF ++ S LL + V
Sbjct: 319 VPPTLRTTYVQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSADLLERLLRSLGHRVT 378
Query: 671 CIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRV 730
+H Q +R + +F + +L+ TDVA+RGLDIP+V +V ++ P +P +Y+HRV
Sbjct: 379 SLHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRV 438
Query: 731 GRTARGEGSSGHALLILRPEELGFLRYLKQAKIPLNEFEFSWSKISDIQLQLEKLISKNY 790
GRTAR G +G A+ ++ ++ + +++ +I E+ ++ LE ++K
Sbjct: 439 GRTARA-GRTGEAVTLVGQRDVQLVLAIEE-RIGRKMVEYEEEGVN-----LEARVAKGS 491
Query: 791 FLNMSGKEAFKAYV 804
L G +A V
Sbjct: 492 LLKEVGAAKREAMV 505
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 420 (152.9 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 103/347 (29%), Positives = 176/347 (50%)
Query: 415 GFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGTGIIII 474
G+ + T IQA+ IPP+LEG D++G A+TG+GKT A+ +P ++ + + PR +++
Sbjct: 20 GYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQKMLST---PRGRVRTLVL 76
Query: 475 SPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATPGRLLDHL- 533
+PTREL+ Q + L + I GG + + ++L G++++VA PGRLLDH+
Sbjct: 77 APTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIW 136
Query: 534 QNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXXXXXXXXX 593
+ T + ++ LIIDEADR+ D+GF+ D++ I+ L + QT+LFS
Sbjct: 137 RGTIDIC--GVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLFSATMPPEVRKLTL 194
Query: 594 XXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCM 653
PV I + ++V+ Y V + V++F +
Sbjct: 195 ETQTN-PVTIQIGTQAPASSVS--HSVYPV-KNHQKTPLLIEILKTTETKSVLIFARTKY 250
Query: 654 SVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDW 713
+ + ++ + G Q +R F IL+ TD+AARGLDI +
Sbjct: 251 GAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISH 310
Query: 714 IVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFLRYLKQ 760
++ YD PD P++Y HR+GRT R + +G AL ++ + +R +++
Sbjct: 311 VINYDMPDTPEDYTHRIGRTGRFD-RTGQALSLVTGRDGDMVRDIQK 356
>WB|WBGene00022378 [details] [associations]
symbol:Y94H6A.5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0040010 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:FYIPYRP GeneTree:ENSGT00550000075100 EMBL:FO081810
GeneID:177054 KEGG:cel:CELE_Y94H6A.5 UCSC:Y94H6A.5a CTD:177054
NextBio:895136 RefSeq:NP_741347.2 ProteinModelPortal:Q688Z4
SMR:Q688Z4 STRING:Q688Z4 PRIDE:Q688Z4 EnsemblMetazoa:Y94H6A.5b
WormBase:Y94H6A.5b InParanoid:Q688Z4 ArrayExpress:Q688Z4
Uniprot:Q688Z4
Length = 871
Score = 442 (160.7 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 110/351 (31%), Positives = 186/351 (52%)
Query: 409 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 468
KAI GF + T IQ +TIP +++G+D+V ++TGSGKT AF++P ++ K R+
Sbjct: 37 KAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ-----KLKRRDT 91
Query: 469 TGI--IIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
TGI +++SPTREL++QTF V+KEL ++ ++GG + + + + +I++ATP
Sbjct: 92 TGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLATP 151
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRLL H+ + +Q ++ DEADR+ ++GF++ + + + +P+ RQT+LFS
Sbjct: 152 GRLL-HVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLPK 210
Query: 587 XXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVC-PSEXXXXXXXXXXXXXXXXXV 645
P+ + +D +E L + +C P E
Sbjct: 211 MLVDFAKAGLTD-PMLVRLD--VDEKVSDKLSMVFCMCRPDEKLFALLHLCRRMDRENKQ 267
Query: 646 MVFFSSCMS-VKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAAR 704
V F + M V++ +L+ + ++ + R +F + IL+ TDVAAR
Sbjct: 268 TVVFCATMKHVEYVVGILHRAGIDCSFVYSQLDATARKMNIQKFHEKQNNILVVTDVAAR 327
Query: 705 GLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGFL 755
G+DIP +D ++ P K ++HRVGR AR G SG A+ ++ +EL +L
Sbjct: 328 GVDIPLLDTVINLHFPPKAKLFVHRVGRVARA-GRSGTAISLIANDELPYL 377
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 439 (159.6 bits), Expect = 1.5e-38, P = 1.5e-38
Identities = 119/369 (32%), Positives = 188/369 (50%)
Query: 388 PSILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 447
P+IL+ FE + +C++ K + G+ K+T IQ +IP ++ GRDL+ A+TGSGKT
Sbjct: 283 PAILT---FE--EANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKT 337
Query: 448 LAFLVPA-----VELIYNLKFMPRNGTGIIIISPTRELSMQTFGVLKELMKYHHHTYG-- 500
AFL+P V+ + + F II++PTREL Q + + K+ + T
Sbjct: 338 AAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIY---LDARKFSYGTCVRP 394
Query: 501 -LIMGGASRQAEAQKLAKGINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIG 559
+I GG +++++G NI+ ATPGRLLD ++ L K L+ L++DEADR+LD+G
Sbjct: 395 VVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTK-LRYLVLDEADRMLDMG 453
Query: 560 FEEDMKQIVNL--LPKR--RQTMLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVA 615
F ED++ ++ +P + RQT++FS P Y+ V + +
Sbjct: 454 FREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILK--PDYLFVVVGQVGGACS 511
Query: 616 GLEQGYVVCPSEXXXXXXXXXXXXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGK 675
+EQ + MVF + F L +P IHG
Sbjct: 512 DVEQMVIEVDEFGKKDKLMEILQEIGSERTMVFVKTKKKADFIATFLCQEKVPSTSIHGD 571
Query: 676 QKQMKRTTTFFQFCNAETGILLCTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTAR 735
++Q +R T F + +++ T VAARGLDI V +++ +D PDD EY+HR+GRT R
Sbjct: 572 REQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEYVHRIGRTGR 631
Query: 736 GEGSSGHAL 744
G++G A+
Sbjct: 632 C-GNTGRAI 639
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 443 (161.0 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 111/349 (31%), Positives = 178/349 (51%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR- 466
L+AIA T IQ + IP L GRDL+ AKTGSGKT F+ P++ I + ++ +
Sbjct: 317 LQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKG 376
Query: 467 NGTGIIIISPTRELSMQTFGVLKELMKYHHHTYGLIMGGASRQAEAQKLAKGINIIVATP 526
+G + ++PTREL+ Q + + KY ++ GG S+Q + ++L G IIVATP
Sbjct: 377 DGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATP 436
Query: 527 GRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQTMLFSXXXXX 586
GRL+D ++ L + + L++DEAD++ D GF + IVN + RQT+LFS
Sbjct: 437 GRLIDMIKLKATKLNR-VSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKP 495
Query: 587 XXXXXXXXXXXXXPVYIGVDDT-KEEATVAGLEQGYVVCPSEXXXXXXXXXXXXXXXXXV 645
P+ I + + + + Q + S+ V
Sbjct: 496 NVEEFARTILSD-PIKISIGMIGSANSDITQIVQ-VLKSDSDKWNWLTNQLALLLSQGSV 553
Query: 646 MVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILLCTDVAARG 705
++F S+ ++V+ L +HG + Q++R+ T F + IL+ TDVAARG
Sbjct: 554 LIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARG 613
Query: 706 LDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHALLILRPEELGF 754
LDIP + +V YD D + + HR+GRT R G++G A ++ P+++ F
Sbjct: 614 LDIPLIKNVVNYDTSRDIESHTHRIGRTGRA-GNTGVAYTLITPKDIHF 661
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 433 (157.5 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 116/346 (33%), Positives = 173/346 (50%)
Query: 408 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV----ELIYNLKF 463
L+ + G T IQ + IP +L GRD++G A TGSGKTL F +P + E L F
Sbjct: 193 LRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF 252
Query: 464 MPRNGTGIIIISPTRELSMQTFGVLK---ELMKYHHHTY---GLIMGGASRQAEAQKLAK 517
R G +II P+REL+ QT G+L+ L++ L +GG S + + + +
Sbjct: 253 SKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH 312
Query: 518 GINIIVATPGRLLDHLQNTPEFLYKNLQCLIIDEADRILDIGFEEDMKQIVNLLPKRRQT 577
G++++VATPGRL+D LQ L + L +DEADR++D+GFE D++ I + +RQT
Sbjct: 313 GVHMMVATPGRLMDLLQKKMVSL-DICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQT 371
Query: 578 MLFSXXXXXXXXXXXXXXXXXXPVYIGVDDTKEEATVAGLEQGYVVCPSEXXXXXXXXXX 637
+LFS PV I V + E YV E
Sbjct: 372 LLFSATMPKKIQNFAKSALVK-PVTINVGRAGAASLDVIQEVEYV---KEEAKMVYLLEC 427
Query: 638 XXXXXXXVMVFFSSCMSVKFHHELLNYIDLPVMCIHGKQKQMKRTTTFFQFCNAETGILL 697
V++F V HE L + + IHG + Q +RT F + +L+
Sbjct: 428 LQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLV 487
Query: 698 CTDVAARGLDIPAVDWIVQYDPPDDPKEYIHRVGRTARGEGSSGHA 743
TDVA++GLD PA+ ++ YD P++ + Y+HR+GRT R G++G A
Sbjct: 488 ATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRS-GNTGIA 532
WARNING: HSPs involving 647 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 838 773 0.00093 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 897
No. of states in DFA: 620 (66 KB)
Total size of DFA: 384 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 61.27u 0.09s 61.36t Elapsed: 00:00:21
Total cpu time: 61.35u 0.10s 61.45t Elapsed: 00:00:22
Start: Thu Aug 15 11:47:05 2013 End: Thu Aug 15 11:47:27 2013
WARNINGS ISSUED: 2