BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12984
(178 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens GN=DDX18 PE=1 SV=2
Length = 670
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 9/119 (7%)
Query: 25 QSKEKSKPAEKD---SDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLK 81
+S E +K E + D +EDE + ++ + L G+ T F +L V ENTLK
Sbjct: 139 ESAETTKETENNVEKPDNDEDESEVPSLPLGLTGA------FEDTSFASLCNLVNENTLK 192
Query: 82 AIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
AI +MGFT MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 193 AIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNG 251
>sp|Q9VD51|DDX18_DROME Probable ATP-dependent RNA helicase pitchoune OS=Drosophila
melanogaster GN=pit PE=2 SV=2
Length = 680
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 19 KKLKILQSKEKSKPAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCEN 78
KK K+L +K K A+ A +DE T VE L D F +LKG V E
Sbjct: 145 KKTKLLPNKSK---AQNGKPAKDDEPFT--VESSLAALDYRDS--DDRSFASLKGAVSEA 197
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
TL+AI +MGFT+MTEIQ++++ PLL+GRDLVG+A+TGSGKTLAFL+PAVELI L+FMPR
Sbjct: 198 TLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPR 257
Query: 139 NG 140
NG
Sbjct: 258 NG 259
>sp|A4R8B5|HAS1_MAGO7 ATP-dependent RNA helicase HAS1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=HAS1 PE=3 SV=2
Length = 587
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 79/110 (71%), Gaps = 6/110 (5%)
Query: 36 DSDANEDEDQTNA----VEVQLPGSDVALEILSSTQFEALKG-KVCENTLKAIADMGFTK 90
DSD +E +D A + +PG D+ L + ++ +A + ENT+KAI +MGFTK
Sbjct: 76 DSDVDEGDDTIAAPAKEADGDIPG-DLTLPTTAESEAQAFSELNLSENTMKAIEEMGFTK 134
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ R IPPLL G+D++G+AKTGSGKTLAFL+PAVE++ +LKF PRNG
Sbjct: 135 MTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSLKFKPRNG 184
>sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus GN=Ddx18 PE=2 SV=1
Length = 660
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Query: 28 EKSKPAEKDSDANEDEDQTN-AVEVQLPGSDVALE-ILSSTQFEALKGKVCENTLKAIAD 85
+K+K E E ED A + ++P + L T F +L V ENTLKAI +
Sbjct: 127 KKAKTEESAEACEEPEDDVKKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEE 186
Query: 86 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MGF +MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+P +ELI LKFMPRNG
Sbjct: 187 MGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNG 241
>sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=HAS1 PE=3 SV=1
Length = 568
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 61/66 (92%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E TLKAI DMGF+KMT++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+E++Y+L+
Sbjct: 111 LSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLR 170
Query: 135 FMPRNG 140
F PRNG
Sbjct: 171 FKPRNG 176
>sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=has1 PE=3 SV=1
Length = 625
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/111 (53%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
Query: 34 EKDSDANED---EDQTNAVEVQLPGSD-VALEILSSTQFEALKGKVCENTLKAIADMGFT 89
E+D NED ED+ +A LP D V L + + + + E TLKAI +MGF
Sbjct: 105 EEDGSDNEDGDAEDKNDAEAADLPSMDAVRLPTVDGEPQKFTELGLSEKTLKAINEMGFE 164
Query: 90 KMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ RTIPPLL GRD++G+AKTGSGKTL+FL+PAVE++ L+F PRNG
Sbjct: 165 TMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNG 215
>sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAS1 PE=1 SV=1
Length = 505
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 18/110 (16%)
Query: 31 KPAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTK 90
K K ++A + +QT VE +FE LK + + TLKAI MGFT
Sbjct: 23 KSTSKQNNAAPEGEQTTCVE----------------KFEELK--LSQPTLKAIEKMGFTT 64
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MT +QARTIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+++LKF PRNG
Sbjct: 65 MTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNG 114
>sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=HAS1 PE=3 SV=2
Length = 569
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 64/76 (84%), Gaps = 2/76 (2%)
Query: 65 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLV 124
S +FE L + E T++AI DMGF KMT++Q +TIPPLL GRD++G+AKTGSGKTLAFL+
Sbjct: 104 SDKFEDLG--LSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLI 161
Query: 125 PAVELIYNLKFMPRNG 140
PA+E++Y+LKF PRNG
Sbjct: 162 PAIEMLYSLKFKPRNG 177
>sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=HAS1 PE=3 SV=1
Length = 559
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 67/95 (70%), Gaps = 10/95 (10%)
Query: 46 TNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEG 105
T+ E PG + + E K E T+KAI +MGF KMT++QA+TIPPLL G
Sbjct: 81 TSEAEADEPGVNYSFE----------KADFSEPTMKAIKEMGFQKMTKVQAKTIPPLLAG 130
Query: 106 RDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
RD++G+AKTGSGKTLAFL+PAVEL+Y+LK PRNG
Sbjct: 131 RDVLGAAKTGSGKTLAFLLPAVELLYSLKIKPRNG 165
>sp|Q5AK59|HAS1_CANAL ATP-dependent RNA helicase HAS1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=HAS1 PE=3 SV=1
Length = 565
Score = 106 bits (265), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 59/64 (92%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
E T+KAI +MGFTKMT++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+Y+LK
Sbjct: 117 EPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIK 176
Query: 137 PRNG 140
PRNG
Sbjct: 177 PRNG 180
>sp|Q74Z73|HAS1_ASHGO ATP-dependent RNA helicase HAS1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=HAS1
PE=3 SV=2
Length = 504
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 59/66 (89%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ TLKAI MGFTKMT++QARTIPPL+ GRD++G+AKTGSGKTLAFL+PA+E++++LK
Sbjct: 46 LSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLK 105
Query: 135 FMPRNG 140
F PRNG
Sbjct: 106 FKPRNG 111
>sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=HAS1 PE=3 SV=2
Length = 567
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 60/66 (90%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E T++AI+DMGF MT++QA+TIPPLL G+D++G+AKTGSGKTLAFL+PA+EL+Y+LK
Sbjct: 110 LSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIELLYSLK 169
Query: 135 FMPRNG 140
F PRNG
Sbjct: 170 FKPRNG 175
>sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana
GN=RH27 PE=2 SV=2
Length = 633
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Query: 62 ILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 121
I+++ FE+L + +NT K+I +MGF +MT+IQA+ IPPL+ G D++G+A+TGSGKTLA
Sbjct: 150 IMTNKTFESLS--LSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLA 207
Query: 122 FLVPAVELIYNLKFMPRNG 140
FL+PAVEL+Y +KF PRNG
Sbjct: 208 FLIPAVELLYRVKFTPRNG 226
>sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=has1
PE=3 SV=1
Length = 622
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 36 DSDANEDEDQTNAVEVQLPGSD-VALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
+++ ++ D+ +A LP +D + L + + + + E TLKAI DMGF MTEI
Sbjct: 107 EAENGDNGDKKDAESTDLPSADALRLPTVEGEPQKFTELGLTEKTLKAINDMGFDTMTEI 166
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
Q RTIPPLL GRD++G+AKTGSGKTL+FL+PAVE++ L+F PRNG
Sbjct: 167 QRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNG 212
>sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=has1 PE=3 SV=1
Length = 606
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 73/112 (65%), Gaps = 13/112 (11%)
Query: 35 KDSDANEDEDQTNAVE------VQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGF 88
+D D NE ++ N + V+LP +D +F L + E T+K I DMGF
Sbjct: 93 EDEDDNEGKEDGNGADLPSLDAVRLPQTDG-----EPKKFTELN--LSEKTMKGIQDMGF 145
Query: 89 TKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ RTIPPLL GRD++G+AKTGSGKTL+FL+PAVE++ L+F PRNG
Sbjct: 146 ETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNG 197
>sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=HAS1 PE=3 SV=1
Length = 497
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
+D+++ +D +T V D A F LK + + T+KAI MGFT+MT +
Sbjct: 8 RDAESEQDHAETETVV-----KDTATTGEVEGSFSDLK--LSDGTMKAIGKMGFTQMTAV 60
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
Q RTIPPLL G+D++G+AKTGSGKTLAFL+PA+E++++LKF PRNG
Sbjct: 61 QTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLKFKPRNG 106
>sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=has1
PE=3 SV=2
Length = 622
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E TLKAI DMGF MTEIQ RTIPPLL GRD++G+AKTGSGKTL+FL+PAVE++ L+
Sbjct: 147 LSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALR 206
Query: 135 FMPRNG 140
F PRNG
Sbjct: 207 FKPRNG 212
>sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=has1 PE=1 SV=1
Length = 578
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 74 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL 133
++ EN KAI +MGF MTEIQ R+IPPLL GRD++G+AKTGSGKTLAFL+P +E++Y L
Sbjct: 95 QLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYAL 154
Query: 134 KFMPRNG 140
KF PRNG
Sbjct: 155 KFKPRNG 161
>sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=HAS1 PE=3 SV=1
Length = 494
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 74/108 (68%), Gaps = 8/108 (7%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
A+ +E E + V+ + SDV F++L + + T++AI MGF+KMT
Sbjct: 2 AQTKRSRDESEKEEVVVKADVESSDV------DHSFKSLN--LSQPTMRAIEKMGFSKMT 53
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
+QARTIPPL+ GRD++G+AKTGSGKTLAFL+P +EL+++LKF PRNG
Sbjct: 54 PVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSLKFKPRNG 101
>sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=HAS1 PE=3 SV=1
Length = 586
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 82/118 (69%), Gaps = 2/118 (1%)
Query: 25 QSKEKSKPAEKDSDANEDEDQTNAVEVQLPGSDVALEILS-STQFEALKG-KVCENTLKA 82
Q + + AE++++A E +D+ ++ + D +L S ST +A + + T+ +
Sbjct: 67 QDNSEDQEAEENANAFERQDEPAGLDSAIQKGDGSLLGPSVSTDAQAFSELNLSDKTMMS 126
Query: 83 IADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
I +MGFTKMTEIQ R IPPLL G+D++G+AKTGSGKTLAFL+PA+E++ +L+F PRNG
Sbjct: 127 INEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLNSLRFKPRNG 184
>sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=has-1 PE=3 SV=1
Length = 578
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 26/131 (19%)
Query: 34 EKDSDANEDEDQTNAVEVQLPG-----------------------SDVALEILS-STQFE 69
E+++DA + E+Q + EV G S +A I + +T F
Sbjct: 51 EEENDAQKAEEQQDGDEVIPTGNGDKEDSDDKDAEAGDELTKTNDSLIAPSIATNATDFS 110
Query: 70 ALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVEL 129
L + + T+KAIA+MGFTKMTEIQ R IPPLL G+D++G+AKTGSGKTLAFL+PA+E+
Sbjct: 111 EL--NLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 168
Query: 130 IYNLKFMPRNG 140
+ +L+F PRNG
Sbjct: 169 LSSLRFKPRNG 179
>sp|Q2UUN6|HAS1_ASPOR ATP-dependent RNA helicase has1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=has1 PE=3 SV=2
Length = 596
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 75/119 (63%), Gaps = 12/119 (10%)
Query: 27 KEKSKPAEKDSDANE-----DEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLK 81
+E S E+ SDA E ED +A ++LP D +F L + E T+K
Sbjct: 80 QEASDNEEEKSDAEETPAANGEDLPSADTIRLPQQDG-----DPVKFTELG--LSEKTMK 132
Query: 82 AIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
I MGF MTE+Q RTIPPLL GRD++G+AKTGSGKTL+FL+PA+E++ L+F PRNG
Sbjct: 133 GIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALRFKPRNG 191
>sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=HAS1 PE=3 SV=1
Length = 610
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
Query: 38 DANEDEDQT----NAVEV-QLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
D +EDED NA+ V LP + T+F+ L + E T++AI MGF MT
Sbjct: 98 DEDEDEDAAGSGANALAVADLPSGTSIPTVDDPTRFDELN--LSERTMEAIKTMGFESMT 155
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
EIQ + IPPLL G+D++G+AKTGSGKTLAFL+PA+E++ +++F PRNG
Sbjct: 156 EIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEMLSSMRFKPRNG 203
>sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=HAS1 PE=3 SV=1
Length = 605
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 69/100 (69%), Gaps = 1/100 (1%)
Query: 42 DEDQTNAVEVQLPGSDVALEILSSTQFEALKG-KVCENTLKAIADMGFTKMTEIQARTIP 100
+E+++ AV P + I S + + + ENT++++ DMGF MT +Q +TIP
Sbjct: 104 EEEESTAVVTTAPADAEVVHIASDAERKPFSTIPLSENTMQSLKDMGFETMTPVQEKTIP 163
Query: 101 PLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
PLL GRD++G+AKTGSGKTLAFL+PA+E++ LKF PRNG
Sbjct: 164 PLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKLKFKPRNG 203
>sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=has1
PE=3 SV=1
Length = 609
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E TL+ I +MGF MTEIQ RTIPPLL GRD++G+AKTGSGKTLAFL+PA+E++ L+
Sbjct: 135 LSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALR 194
Query: 135 FMPRNG 140
F PRNG
Sbjct: 195 FKPRNG 200
>sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS)
GN=HAS1 PE=3 SV=1
Length = 604
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 74/114 (64%), Gaps = 13/114 (11%)
Query: 32 PAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGK-----VCENTLKAIADM 86
P E+D + + +Q + +LP +L LS Q E K + E TLKAI +M
Sbjct: 91 PVEQDDEQKSESEQ----QPELP----SLNALSLPQTENEPQKFTELNLSEKTLKAIQEM 142
Query: 87 GFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
GF MTEIQ R IPPL+ GRD++G+AKTGSGKTL+FL+PAVE++ L+F PRNG
Sbjct: 143 GFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNG 196
>sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=HAS1 PE=3
SV=2
Length = 591
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 6/103 (5%)
Query: 38 DANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQAR 97
+A + D N ++ LP A + FE LK + E T+KAI +M FTKMTEIQ R
Sbjct: 91 NAENNTDLPNGGQLTLPPVAGA----EAQSFEELK--LSEKTMKAINEMKFTKMTEIQRR 144
Query: 98 TIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
IPP L GRD++G+AKTGSGKTLAFL+P +E++ +L+F PRNG
Sbjct: 145 GIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLRFKPRNG 187
>sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=has1 PE=3 SV=1
Length = 576
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 54/66 (81%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E T+KAI MGF MTEIQ RTIPP L GRD++G+AKTGSGKTLAFL+PAVE++ L+
Sbjct: 105 LSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEMLSALR 164
Query: 135 FMPRNG 140
F PRNG
Sbjct: 165 FKPRNG 170
>sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp.
japonica GN=Os03g0802700 PE=3 SV=1
Length = 590
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 65/86 (75%), Gaps = 2/86 (2%)
Query: 55 GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKT 114
G++ IL++ F L V E T +AI +M +T +T+IQAR+IP LL G+D++G+AKT
Sbjct: 85 GNEGGSGILTNMLFSELG--VSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKT 142
Query: 115 GSGKTLAFLVPAVELIYNLKFMPRNG 140
GSGKTLAFL+PA+E++++ FMPRNG
Sbjct: 143 GSGKTLAFLIPAIEMLHHAHFMPRNG 168
>sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=HAS1 PE=3 SV=1
Length = 517
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 55/66 (83%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E T KAI MGF MTE+QAR IPPL+ G+D++G+A+TGSGKTL+FL+PA+E+++ LK
Sbjct: 57 LSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLK 116
Query: 135 FMPRNG 140
F PRNG
Sbjct: 117 FKPRNG 122
>sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana
GN=RH51 PE=2 SV=1
Length = 568
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Query: 62 ILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 121
I+++ F++L + E T AI +MGF MT+IQA +I PLLEG+D++G+A+TGSGKTLA
Sbjct: 85 IMTNVTFDSLD--LSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLA 142
Query: 122 FLVPAVELIYNLKFMPRNG 140
FL+PAVEL++ +F PRNG
Sbjct: 143 FLIPAVELLFKERFSPRNG 161
>sp|Q0DBS1|RH51_ORYSJ Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa
subsp. japonica GN=Os06g0535100 PE=3 SV=2
Length = 590
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
T AI DM +T +TEIQAR+IPPL+ G D++ SAKTGSGKTLAFL+PA+EL+ L+F PR
Sbjct: 97 TANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPR 156
Query: 139 NG 140
NG
Sbjct: 157 NG 158
>sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium
discoideum GN=ddx18 PE=3 SV=1
Length = 602
Score = 93.2 bits (230), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 54/64 (84%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
ENT K+I +MGF KMT IQA++I PLLEG+DL+G+A+TGSGKTLAFL+PA+E++ F
Sbjct: 128 ENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNFK 187
Query: 137 PRNG 140
PRNG
Sbjct: 188 PRNG 191
>sp|P0CQ84|HAS1_CRYNJ ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=HAS1 PE=3 SV=1
Length = 607
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
T AI MGF MTE+QARTIPPLL G+D++G+A+TGSGKT+AFL+P+VEL+ L+F P
Sbjct: 140 TTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPV 199
Query: 139 NG 140
NG
Sbjct: 200 NG 201
>sp|P0CQ85|HAS1_CRYNB ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=HAS1 PE=3 SV=1
Length = 607
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 51/62 (82%)
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
T AI MGF MTE+QARTIPPLL G+D++G+A+TGSGKT+AFL+P+VEL+ L+F P
Sbjct: 140 TTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPV 199
Query: 139 NG 140
NG
Sbjct: 200 NG 201
>sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP4 PE=3 SV=1
Length = 770
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E TLK + + F K+TEIQ +IP L+G D++G+AKTGSGKTLAFL+P +E +Y K
Sbjct: 48 ISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEKLYREK 107
Query: 135 FMPRNGKSWQGKL-----RPLTNGVYLVACNVFKST 165
+ +G G L R L +Y V + K T
Sbjct: 108 WTDMDG---LGALIISPTRELAMQIYEVLSKIGKHT 140
>sp|Q5AF95|DBP4_CANAL ATP-dependent RNA helicase DBP4 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP4 PE=3 SV=1
Length = 765
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
S +QF L + ENTLK + + F +T+IQ +TIP L+G DL+G+A+TGSGKTLAFL
Sbjct: 46 SVSQFSDLP--ITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFL 103
Query: 124 VPAVELIYNLKFMPRNG 140
+P +E + K +G
Sbjct: 104 IPVIESLIRNKITEYDG 120
>sp|Q4P5U4|DBP4_USTMA ATP-dependent RNA helicase DBP4 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP4 PE=3 SV=1
Length = 869
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 50/66 (75%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ + T + + G+T MT+IQA+++ L+G+D++G+A+TGSGKTLAFL+P +E++Y K
Sbjct: 65 LSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEILYRRK 124
Query: 135 FMPRNG 140
+ P +G
Sbjct: 125 WGPSDG 130
>sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp.
japonica GN=Os01g0618400 PE=2 SV=1
Length = 594
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 73/122 (59%), Gaps = 19/122 (15%)
Query: 38 DANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQAR 97
DA + D++ V+ GS LS T+F+ + + +LKA+ D G+ +MT++Q
Sbjct: 107 DAAKSGDESGGVD----GS-----YLSDTRFD--QCTISPLSLKAVKDAGYERMTQVQEA 155
Query: 98 TIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPLTNGVYLV 157
T+P +L+G+D++ AKTG+GKT+AFL+PA+E++ L S + +LRP N LV
Sbjct: 156 TLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALP------NSRRDQLRPSIN--LLV 207
Query: 158 AC 159
C
Sbjct: 208 MC 209
>sp|A4RGU2|DBP4_MAGO7 ATP-dependent RNA helicase DBP4 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP4 PE=3 SV=1
Length = 798
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
+ E T K + D F +T+IQAR IP L+GRD++G+AKTGSGKTLAFLVP +E +Y
Sbjct: 56 LSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLEKLYR 113
>sp|Q0JL73|RH26_ORYSJ DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp.
japonica GN=Os01g0618500 PE=2 SV=1
Length = 536
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 63 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
LS T+F+ + V +LKAI D G+ KMT++Q T+P +L+G D++ AKTG+GKT+AF
Sbjct: 71 LSETRFD--QCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAF 128
Query: 123 LVPAVELIYNLKFMP 137
L+PA+EL+ L P
Sbjct: 129 LLPAIELLSTLPRSP 143
>sp|A6ZPU3|DBP4_YEAS7 ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP4 PE=3 SV=1
Length = 770
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ + TLK + + F K+TEIQA +IP L+G D++ +AKTGSGKTLAFLVP +E +Y K
Sbjct: 48 ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREK 107
Query: 135 FMPRNG 140
+ +G
Sbjct: 108 WTEFDG 113
>sp|P20448|DBP4_YEAST ATP-dependent RNA helicase HCA4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HCA4 PE=1 SV=2
Length = 770
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ + TLK + + F K+TEIQA +IP L+G D++ +AKTGSGKTLAFLVP +E +Y K
Sbjct: 48 ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREK 107
Query: 135 FMPRNG 140
+ +G
Sbjct: 108 WTEFDG 113
>sp|A5E3K3|DBP4_LODEL ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP4 PE=3 SV=1
Length = 775
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 11/121 (9%)
Query: 10 MNKITKREKKKLKILQSKEKSKPAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFE 69
M K + KK K+L KEK + S+ E + +E P D A S F
Sbjct: 1 MVKSQRNGKKGAKVLSRKEK-----RQSEKEEMDSLRQRIEEYNPEVDEA----SIKHFS 51
Query: 70 ALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVEL 129
L + +NTL+ + + F +T+IQ ++IP L+G DL+G+A+TGSGKTLAFL+P +E+
Sbjct: 52 DLP--ITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEI 109
Query: 130 I 130
+
Sbjct: 110 L 110
>sp|A3GGE9|DBP4_PICST ATP-dependent RNA helicase DBP4 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DBP4 PE=3 SV=2
Length = 765
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 29 KSKPAEKDSDANEDED-QTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMG 87
K+K + S A E E+ + ++ ++ D A++ S +QF L + + TL+ + +
Sbjct: 9 KNKKGQSRSQAREKEEAELLKLQERIDQYDPAVDEKSISQFSDLP--ITQETLRGLNESS 66
Query: 88 FTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
F +T+IQ +TIP L+G DL+G+A+TGSGKTLAFL+P VE + K +G
Sbjct: 67 FMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPVVESLIRNKITEHDG 119
>sp|Q5ZJF6|DDX10_CHICK Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus GN=DDX10
PE=2 SV=1
Length = 875
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%)
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAF+VPA+EL+Y L++
Sbjct: 84 TLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWTSA 143
Query: 139 NG 140
+G
Sbjct: 144 DG 145
>sp|Q1E1R7|SPB4_COCIM ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis (strain
RS) GN=SPB4 PE=3 SV=2
Length = 653
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 65 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLV 124
S ++AL + E L A+A MGFT+MT +QA TIP + +D+V A TGSGKT+AFL+
Sbjct: 14 SRSWQALTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVEAVTGSGKTMAFLI 73
Query: 125 PAVELIYNLK 134
P VE + L+
Sbjct: 74 PVVEKLLRLE 83
>sp|Q6CGD1|DBP4_YARLI ATP-dependent RNA helicase DBP4 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP4 PE=3 SV=1
Length = 740
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
++FE L + E T++ + + + T++Q R IPP L+G DL+G+A+TGSGKTLAFLVP
Sbjct: 39 SKFEELP--LSEATIEGLKNSHYVTCTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVP 96
Query: 126 AVELIYNLKFMPRNG 140
+E ++ K+ +G
Sbjct: 97 VLECLFRNKWSDVDG 111
>sp|A7TJ71|DBP4_VANPO ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP4 PE=3 SV=1
Length = 768
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ +TLK + D F K+T+IQ +IP L+G D++G+AKTGSGKTLAFL+P +E +Y +
Sbjct: 48 ISNSTLKGLNDSAFLKLTDIQRDSIPMSLKGYDILGAAKTGSGKTLAFLIPVLEKLYRER 107
Query: 135 FMPRNG 140
+ +G
Sbjct: 108 WTEFDG 113
>sp|A6R918|SPB4_AJECN ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=SPB4 PE=3 SV=2
Length = 676
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 65 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLV 124
S ++AL + E L AI+ MGF++MT +QA TIP + +D+V A TGSGKTLAFL+
Sbjct: 18 SRAWDALTPPLSEWILDAISAMGFSRMTPVQASTIPLFMAHKDVVVEAVTGSGKTLAFLI 77
Query: 125 PAVELIYNLK 134
P VE + L+
Sbjct: 78 PVVERLLRLE 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,004,563
Number of Sequences: 539616
Number of extensions: 2558485
Number of successful extensions: 13656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 11864
Number of HSP's gapped (non-prelim): 1768
length of query: 178
length of database: 191,569,459
effective HSP length: 110
effective length of query: 68
effective length of database: 132,211,699
effective search space: 8990395532
effective search space used: 8990395532
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)