Your job contains 1 sequence.
>psy12984
MSKDTEKHLMNKITKREKKKLKILQSKEKSKPAEKDSDANEDEDQTNAVEVQLPGSDVAL
EILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTL
AFLVPAVELIYNLKFMPRNGKSWQGKLRPLTNGVYLVACNVFKSTQPPTVIKVQTLIF
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12984
(178 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NEQ3 - symbol:DDX18 "Uncharacterized protein"... 294 4.0e-25 1
UNIPROTKB|E2RFA3 - symbol:DDX18 "Uncharacterized protein"... 289 1.5e-24 1
UNIPROTKB|F1N533 - symbol:DDX18 "Uncharacterized protein"... 287 2.4e-24 1
UNIPROTKB|F1MSX0 - symbol:F1MSX0 "Uncharacterized protein... 287 2.4e-24 1
ZFIN|ZDB-GENE-030131-9685 - symbol:ddx18 "DEAD (Asp-Glu-A... 282 7.8e-24 1
UNIPROTKB|Q9NVP1 - symbol:DDX18 "ATP-dependent RNA helica... 281 1.1e-23 1
FB|FBgn0025140 - symbol:pit "pitchoune" species:7227 "Dro... 277 3.0e-23 1
MGI|MGI:1914192 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) bo... 276 3.6e-23 1
UNIPROTKB|I3L840 - symbol:DDX18 "Uncharacterized protein"... 275 4.7e-23 1
UNIPROTKB|F1RY13 - symbol:DDX18 "Uncharacterized protein"... 275 4.8e-23 1
UNIPROTKB|I3L7B7 - symbol:DDX18 "Uncharacterized protein"... 275 5.2e-23 1
RGD|1549712 - symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box po... 267 3.5e-22 1
UNIPROTKB|D4A824 - symbol:Ddx18 "Protein Ddx18" species:1... 266 4.3e-22 1
SGD|S000004903 - symbol:HAS1 "ATP-dependent RNA helicase"... 263 4.4e-22 1
WB|WBGene00015232 - symbol:B0511.6 species:6239 "Caenorha... 263 5.6e-22 1
TAIR|locus:2152099 - symbol:AT5G65900 species:3702 "Arabi... 264 6.4e-22 1
CGD|CAL0003050 - symbol:HAS1 species:5476 "Candida albica... 262 8.0e-22 1
UNIPROTKB|Q5AK59 - symbol:HAS1 "ATP-dependent RNA helicas... 262 8.0e-22 1
POMBASE|SPAC1F7.02c - symbol:has1 "ATP-dependent RNA heli... 255 4.9e-21 1
ASPGD|ASPL0000044206 - symbol:AN1949 species:162425 "Emer... 247 4.1e-20 1
DICTYBASE|DDB_G0282741 - symbol:ddx18 "DEAD/DEAH box heli... 237 4.8e-19 1
TAIR|locus:2086909 - symbol:AT3G18600 species:3702 "Arabi... 229 3.1e-18 1
GENEDB_PFALCIPARUM|PFF1500c - symbol:PFF1500c "DEAD/DEAH ... 221 2.5e-17 1
UNIPROTKB|C6KTE4 - symbol:PFF1500c "DEAD/DEAH box ATP-dep... 221 2.5e-17 1
CGD|CAL0004182 - symbol:HCA4 species:5476 "Candida albica... 182 5.9e-13 1
TAIR|locus:2159517 - symbol:PDE340 "PIGMENT DEFECTIVE 340... 174 5.0e-12 1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s... 159 6.2e-12 2
POMBASE|SPAC1093.05 - symbol:SPAC1093.05 "ATP-dependent R... 170 1.1e-11 1
UNIPROTKB|F1SV16 - symbol:F1SV16 "Uncharacterized protein... 162 1.2e-11 1
UNIPROTKB|P21507 - symbol:srmB "SrmB, DEAD-box RNA helica... 166 1.2e-11 1
SGD|S000003570 - symbol:HCA4 "DEAD box RNA helicase" spec... 169 1.5e-11 1
UNIPROTKB|A4RGU2 - symbol:DBP4 "ATP-dependent RNA helicas... 169 1.6e-11 1
POMBASE|SPAC30D11.03 - symbol:ddx27 "ATP-dependent RNA he... 168 1.8e-11 1
UNIPROTKB|F1P0I3 - symbol:DDX10 "Probable ATP-dependent R... 168 2.3e-11 1
UNIPROTKB|Q5ZJF6 - symbol:DDX10 "Probable ATP-dependent R... 168 2.3e-11 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 155 2.7e-11 2
UNIPROTKB|G4MSR4 - symbol:MGG_07099 "Uncharacterized prot... 162 7.5e-11 1
UNIPROTKB|A4QYM6 - symbol:DRS1 "ATP-dependent RNA helicas... 162 8.6e-11 1
TAIR|locus:2159527 - symbol:STRS2 "STRESS RESPONSE SUPPRE... 158 1.4e-10 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 158 1.5e-10 1
UNIPROTKB|E9PIF2 - symbol:DDX10 "Probable ATP-dependent R... 160 1.5e-10 1
UNIPROTKB|E2RC35 - symbol:DDX10 "Uncharacterized protein"... 160 1.6e-10 1
RGD|1308990 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box po... 160 1.6e-10 1
UNIPROTKB|Q13206 - symbol:DDX10 "Probable ATP-dependent R... 160 1.6e-10 1
MGI|MGI:1924841 - symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) bo... 160 1.6e-10 1
UNIPROTKB|Q08DT0 - symbol:DDX10 "Uncharacterized protein"... 160 1.6e-10 1
CGD|CAL0005900 - symbol:MAK5 species:5476 "Candida albica... 159 1.8e-10 1
UNIPROTKB|Q9KU63 - symbol:VC_0660 "ATP-dependent RNA heli... 154 2.3e-10 1
TIGR_CMR|VC_0660 - symbol:VC_0660 "ATP-dependent RNA heli... 154 2.3e-10 1
POMBASE|SPCC1494.06c - symbol:SPCC1494.06c "ATP-dependent... 142 2.3e-10 2
UNIPROTKB|F8WEI3 - symbol:DDX56 "Probable ATP-dependent R... 146 2.5e-10 1
ASPGD|ASPL0000061778 - symbol:AN0589 species:162425 "Emer... 157 3.1e-10 1
ASPGD|ASPL0000034540 - symbol:spb4 species:162425 "Emeric... 155 3.6e-10 1
UNIPROTKB|H0Y960 - symbol:DDX4 "Probable ATP-dependent RN... 149 3.7e-10 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 155 4.1e-10 1
DICTYBASE|DDB_G0284017 - symbol:ddx10 "DEAD/DEAH box heli... 156 4.3e-10 1
UNIPROTKB|F1SLL4 - symbol:LOC100626422 "Uncharacterized p... 144 4.4e-10 1
ASPGD|ASPL0000054300 - symbol:AN0583 species:162425 "Emer... 156 4.7e-10 1
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 134 5.0e-10 2
TAIR|locus:2160225 - symbol:AT5G54910 species:3702 "Arabi... 154 5.6e-10 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 139 5.9e-10 2
ZFIN|ZDB-GENE-071022-2 - symbol:ddx10 "DEAD (Asp-Glu-Ala-... 154 7.1e-10 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 155 8.0e-10 1
MGI|MGI:2182303 - symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) bo... 141 1.1e-09 2
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 153 1.1e-09 1
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 149 1.1e-09 1
WB|WBGene00021277 - symbol:Y23H5B.6 species:6239 "Caenorh... 151 1.2e-09 1
TIGR_CMR|CPS_1418 - symbol:CPS_1418 "ATP-dependent RNA he... 147 1.2e-09 1
CGD|CAL0000056 - symbol:orf19.7546 species:5476 "Candida ... 148 1.6e-09 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 147 1.6e-09 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 135 1.6e-09 2
ZFIN|ZDB-GENE-021212-1 - symbol:ddx55 "DEAD (Asp-Glu-Ala-... 148 1.8e-09 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 149 1.8e-09 1
POMBASE|SPAC31A2.07c - symbol:dbp10 "ATP-dependent RNA he... 150 1.8e-09 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 149 1.9e-09 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 149 1.9e-09 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 149 1.9e-09 1
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 149 1.9e-09 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 134 2.0e-09 2
UNIPROTKB|Q485I3 - symbol:dbpA "ATP-dependent RNA helicas... 146 2.0e-09 1
TIGR_CMR|CPS_1540 - symbol:CPS_1540 "ATP-dependent RNA he... 146 2.0e-09 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 148 2.2e-09 1
UNIPROTKB|F8WDT8 - symbol:DDX56 "Probable ATP-dependent R... 137 2.2e-09 1
UNIPROTKB|J3QRQ7 - symbol:DDX5 "Probable ATP-dependent RN... 137 2.2e-09 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 148 2.3e-09 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 148 2.3e-09 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 148 2.3e-09 1
TAIR|locus:2825324 - symbol:AT1G71370 species:3702 "Arabi... 146 2.7e-09 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 137 3.2e-09 2
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 134 3.2e-09 2
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 134 3.2e-09 2
UNIPROTKB|E7EX41 - symbol:DDX55 "ATP-dependent RNA helica... 135 3.6e-09 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 134 4.1e-09 2
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 134 4.1e-09 2
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 134 4.1e-09 2
UNIPROTKB|Q5ZLN8 - symbol:DDX55 "ATP-dependent RNA helica... 144 4.8e-09 1
TAIR|locus:2054688 - symbol:AT2G07750 species:3702 "Arabi... 146 4.8e-09 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 134 5.2e-09 2
SGD|S000003931 - symbol:DRS1 "Nucleolar DEAD-box protein ... 145 5.3e-09 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 134 5.5e-09 2
WARNING: Descriptions of 514 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 294 (108.6 bits), Expect = 4.0e-25, P = 4.0e-25
Identities = 60/107 (56%), Positives = 75/107 (70%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALE-ILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
+D D + ++ E ++P + L F +L G V ENTLK I+DMGFT MTE
Sbjct: 132 EDEDGQDTGEKEAEEEDEVPSLPLGLTGAFEDNSFTSLAGLVSENTLKGISDMGFTHMTE 191
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
IQ ++I PLLEGRD++ +AKTGSGKTLAFL+PAVELIY LKFMPRNG
Sbjct: 192 IQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNG 238
>UNIPROTKB|E2RFA3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY GeneTree:ENSGT00680000100037
CTD:8886 EMBL:AAEX03011884 RefSeq:XP_533327.3
Ensembl:ENSCAFT00000007958 GeneID:476120 KEGG:cfa:476120
Uniprot:E2RFA3
Length = 669
Score = 289 (106.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 65/111 (58%), Positives = 78/111 (70%)
Query: 32 PAEKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFT 89
P E +++ + +D+ EV LP G A E T F +L V ENTLKAI +MGFT
Sbjct: 143 PEETENNGEKPDDEEEDSEVPSLPLGLTGAFE---DTSFASLSSLVNENTLKAIKEMGFT 199
Query: 90 KMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI LKFMPRNG
Sbjct: 200 NMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNG 250
>UNIPROTKB|F1N533 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:DAAA02005160 IPI:IPI00904747
Ensembl:ENSBTAT00000045489 OMA:TENKGES Uniprot:F1N533
Length = 670
Score = 287 (106.1 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 65/111 (58%), Positives = 78/111 (70%)
Query: 32 PAEKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFT 89
P E ++ + +D+ EV LP G A E T F++L V ENTLKAI +MGFT
Sbjct: 144 PEETENRVEKPDDEGEDSEVPSLPLGLTGAFE---DTSFDSLTNLVNENTLKAIKEMGFT 200
Query: 90 KMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI LKFMPRNG
Sbjct: 201 NMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNG 251
>UNIPROTKB|F1MSX0 [details] [associations]
symbol:F1MSX0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:DAAA02009745
IPI:IPI00903923 Ensembl:ENSBTAT00000039166 Uniprot:F1MSX0
Length = 674
Score = 287 (106.1 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 65/111 (58%), Positives = 78/111 (70%)
Query: 32 PAEKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFT 89
P E ++ + +D+ EV LP G A E T F++L V ENTLKAI +MGFT
Sbjct: 148 PEETENRVEKPDDEGEDSEVPSLPLGLTGAFE---DTSFDSLTNLVNENTLKAIKEMGFT 204
Query: 90 KMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI LKFMPRNG
Sbjct: 205 NMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLKFMPRNG 255
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 282 (104.3 bits), Expect = 7.8e-24, P = 7.8e-24
Identities = 63/108 (58%), Positives = 75/108 (69%)
Query: 34 EKDSDANEDEDQTNAVEVQLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
EK+ A ED D+ QLP G A E S F +L V ENTLK + +MGF MT
Sbjct: 132 EKEGSAEEDSDEDGP---QLPSGLTGAFEDRS---FASLSEVVSENTLKGVKEMGFDTMT 185
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
EIQ +TI PLLEGRD++ +AKTGSGKTLAFL+P++ELIY LKFMPRNG
Sbjct: 186 EIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPRNG 233
>UNIPROTKB|Q9NVP1 [details] [associations]
symbol:DDX18 "ATP-dependent RNA helicase DDX18"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AK001467 EMBL:BC001238 EMBL:BC003360 EMBL:BC024739
EMBL:X98743 EMBL:CR457060 IPI:IPI00301323 PIR:S71758
RefSeq:NP_006764.3 UniGene:Hs.363492 PDB:3LY5 PDBsum:3LY5
ProteinModelPortal:Q9NVP1 SMR:Q9NVP1 IntAct:Q9NVP1
MINT:MINT-1382348 STRING:Q9NVP1 PhosphoSite:Q9NVP1 DMDM:20532388
SWISS-2DPAGE:Q9NVP1 PaxDb:Q9NVP1 PeptideAtlas:Q9NVP1 PRIDE:Q9NVP1
Ensembl:ENST00000263239 GeneID:8886 KEGG:hsa:8886 UCSC:uc002tlh.1
CTD:8886 GeneCards:GC02P118572 HGNC:HGNC:2741 HPA:HPA035400
MIM:606355 neXtProt:NX_Q9NVP1 PharmGKB:PA27207 HOVERGEN:HBG105702
InParanoid:Q9NVP1 OrthoDB:EOG4894MF PhylomeDB:Q9NVP1
ChEMBL:CHEMBL5060 ChiTaRS:DDX18 EvolutionaryTrace:Q9NVP1
GenomeRNAi:8886 NextBio:33369 ArrayExpress:Q9NVP1 Bgee:Q9NVP1
CleanEx:HS_DDX18 Genevestigator:Q9NVP1 GermOnline:ENSG00000088205
Uniprot:Q9NVP1
Length = 670
Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 59/107 (55%), Positives = 76/107 (71%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALE-ILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
K+++ N ++ + E ++P + L T F +L V ENTLKAI +MGFT MTE
Sbjct: 145 KETENNVEKPDNDEDESEVPSLPLGLTGAFEDTSFASLCNLVNENTLKAIKEMGFTNMTE 204
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
IQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 205 IQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNG 251
>FB|FBgn0025140 [details] [associations]
symbol:pit "pitchoune" species:7227 "Drosophila melanogaster"
[GO:0005730 "nucleolus" evidence=NAS;IDA] [GO:0016049 "cell growth"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=NAS] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 KO:K13179 OMA:KDGYRSY EMBL:U84552 EMBL:AY071402
EMBL:AY119620 RefSeq:NP_524446.3 RefSeq:NP_732694.2
UniGene:Dm.33428 ProteinModelPortal:Q9VD51 SMR:Q9VD51
DIP:DIP-19700N MINT:MINT-1004790 STRING:Q9VD51 PaxDb:Q9VD51
EnsemblMetazoa:FBtr0084174 EnsemblMetazoa:FBtr0084175 GeneID:42595
KEGG:dme:Dmel_CG6375 UCSC:CG6375-RA CTD:42595 FlyBase:FBgn0025140
GeneTree:ENSGT00680000100037 InParanoid:Q9VD51 OrthoDB:EOG4H189W
PhylomeDB:Q9VD51 ChiTaRS:pit GenomeRNAi:42595 NextBio:829597
Bgee:Q9VD51 GermOnline:CG6375 Uniprot:Q9VD51
Length = 680
Score = 277 (102.6 bits), Expect = 3.0e-23, P = 3.0e-23
Identities = 61/108 (56%), Positives = 76/108 (70%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
A+ A +DE T VE L D F +LKG V E TL+AI +MGFT+MT
Sbjct: 156 AQNGKPAKDDEPFT--VESSLAALDYRDS--DDRSFASLKGAVSEATLRAIKEMGFTEMT 211
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
EIQ++++ PLL+GRDLVG+A+TGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 212 EIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRNG 259
>MGI|MGI:1914192 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914192
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AK075864 EMBL:AK019845 EMBL:BC028246
EMBL:BC103776 IPI:IPI00459381 RefSeq:NP_080136.2 UniGene:Mm.44219
ProteinModelPortal:Q8K363 SMR:Q8K363 STRING:Q8K363
PhosphoSite:Q8K363 PaxDb:Q8K363 PRIDE:Q8K363
Ensembl:ENSMUST00000001724 GeneID:66942 KEGG:mmu:66942
InParanoid:Q8K363 NextBio:323084 Bgee:Q8K363 CleanEx:MM_DDX18
Genevestigator:Q8K363 GermOnline:ENSMUSG00000001674 Uniprot:Q8K363
Length = 660
Score = 276 (102.2 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 59/110 (53%), Positives = 77/110 (70%)
Query: 34 EKDSDANED--EDQTNAVEVQLPGSDVALE-ILSSTQFEALKGKVCENTLKAIADMGFTK 90
E+ ++A E+ +D A + ++P + L T F +L V ENTLKAI +MGF +
Sbjct: 132 EESAEACEEPEDDVKKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKR 191
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+P +ELI LKFMPRNG
Sbjct: 192 MTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNG 241
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 275 (101.9 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 63/109 (57%), Positives = 77/109 (70%)
Query: 34 EKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
E+ ++ E D+ + EV LP G A E T F +L V ENTL+AI +MGFT M
Sbjct: 143 EETENSMEKPDKDDDTEVPSLPLGLTGAFE---DTSFASLTDLVNENTLRAIKEMGFTNM 199
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
TEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 200 TEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNG 248
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 275 (101.9 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 63/109 (57%), Positives = 77/109 (70%)
Query: 34 EKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
E+ ++ E D+ + EV LP G A E T F +L V ENTL+AI +MGFT M
Sbjct: 147 EETENSMEKPDKDDDTEVPSLPLGLTGAFE---DTSFASLTDLVNENTLRAIKEMGFTNM 203
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
TEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 204 TEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNG 252
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 275 (101.9 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 63/109 (57%), Positives = 77/109 (70%)
Query: 34 EKDSDANEDEDQTNAVEV-QLP-GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
E+ ++ E D+ + EV LP G A E T F +L V ENTL+AI +MGFT M
Sbjct: 172 EETENSMEKPDKDDDTEVPSLPLGLTGAFE---DTSFASLTDLVNENTLRAIKEMGFTNM 228
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
TEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+PAVELI L+FMPRNG
Sbjct: 229 TEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNG 277
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 267 (99.0 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 58/109 (53%), Positives = 72/109 (66%)
Query: 34 EKDSDANEDEDQTN-AVEVQLPGSDVALE-ILSSTQFEALKGKVCENTLKAIADMGFTKM 91
E + E ED A + ++P + + T F +L V ENTLKAI +MGF M
Sbjct: 147 EPEGAGEEPEDGVKEADDSEVPSLPLGVTGAFEDTSFASLSNLVNENTLKAIEEMGFKHM 206
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
TEIQ ++I PLLEGRDL+ +AKTGSGKTLAFL+P +ELI LKFMPRNG
Sbjct: 207 TEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNG 255
>UNIPROTKB|D4A824 [details] [associations]
symbol:Ddx18 "Protein Ddx18" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1549712 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
EMBL:AC128353 IPI:IPI00393022 Ensembl:ENSRNOT00000028172
ArrayExpress:D4A824 Uniprot:D4A824
Length = 662
Score = 266 (98.7 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 59/107 (55%), Positives = 72/107 (67%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
E+ D ++ D + + L G A E T F +L V ENTLKAI +MGF MTE
Sbjct: 141 EEPEDGVKEADDSEVPSLPL-GVTGAFE---DTSFASLSNLVNENTLKAIEEMGFKHMTE 196
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
IQ ++I PLLEGRDL+ +AKTGSGKTLAFL+P +ELI LKFMPRNG
Sbjct: 197 IQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNG 243
>SGD|S000004903 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004903 GO:GO:0005524
GO:GO:0005635 GO:GO:0005730 GO:GO:0003723 EMBL:BK006946
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030686 GO:GO:0006364 GO:GO:0004004 EMBL:X80836
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 OrthoDB:EOG4ZKNVS
PIR:S47451 RefSeq:NP_014017.1 ProteinModelPortal:Q03532 SMR:Q03532
DIP:DIP-4396N IntAct:Q03532 MINT:MINT-482816 STRING:Q03532
PaxDb:Q03532 PeptideAtlas:Q03532 EnsemblFungi:YMR290C GeneID:855335
KEGG:sce:YMR290C CYGD:YMR290c NextBio:979064 Genevestigator:Q03532
GermOnline:YMR290C Uniprot:Q03532
Length = 505
Score = 263 (97.6 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 58/110 (52%), Positives = 76/110 (69%)
Query: 35 KDSDANE----DEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTK 90
+DS++ E DE T+ P + + +FE LK + + TLKAI MGFT
Sbjct: 10 RDSESTEEPVVDEKSTSKQNNAAPEGE---QTTCVEKFEELK--LSQPTLKAIEKMGFTT 64
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MT +QARTIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+++LKF PRNG
Sbjct: 65 MTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNG 114
>WB|WBGene00015232 [details] [associations]
symbol:B0511.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0040007 GO:GO:0002119 GO:GO:0003723 GO:GO:0043652
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY GeneTree:ENSGT00680000100037 HSSP:P10081 EMBL:FO080219
PIR:T33113 RefSeq:NP_492779.1 ProteinModelPortal:O61815 SMR:O61815
DIP:DIP-27278N MINT:MINT-1068292 STRING:O61815 PaxDb:O61815
EnsemblMetazoa:B0511.6.1 EnsemblMetazoa:B0511.6.2 GeneID:172954
KEGG:cel:CELE_B0511.6 UCSC:B0511.6.1 CTD:172954 WormBase:B0511.6
InParanoid:O61815 NextBio:877669 Uniprot:O61815
Length = 544
Score = 263 (97.6 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 54/109 (49%), Positives = 78/109 (71%)
Query: 32 PAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
P E++ + +E+Q + E + + V+ E L+ T F +L+GKV N LKA+ +GFT M
Sbjct: 34 PMEEEDEEEVEEEQKHQTE-ESSETKVS-EFLTKTTFASLEGKVNANLLKAVQGLGFTTM 91
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
TEIQA++I PLLEG+D++ SAKTGSGKTLAFL+PA+EL++ L + NG
Sbjct: 92 TEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNG 140
>TAIR|locus:2152099 [details] [associations]
symbol:AT5G65900 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AL021684 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 EMBL:AB018108 EMBL:AY059930
EMBL:BT001188 EMBL:AJ012745 IPI:IPI00526354 PIR:T05883 PIR:T51352
RefSeq:NP_201391.1 UniGene:At.19658 UniGene:At.66704
ProteinModelPortal:Q9SB89 SMR:Q9SB89 PaxDb:Q9SB89 PRIDE:Q9SB89
EnsemblPlants:AT5G65900.1 GeneID:836719 KEGG:ath:AT5G65900
GeneFarm:951 TAIR:At5g65900 InParanoid:Q9SB89 OMA:HLENTNG
PhylomeDB:Q9SB89 ProtClustDB:CLSN2916378 Genevestigator:Q9SB89
GermOnline:AT5G65900 Uniprot:Q9SB89
Length = 633
Score = 264 (98.0 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 51/106 (48%), Positives = 78/106 (73%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
KD++A +E++ E + + + I+++ FE+L + +NT K+I +MGF +MT+I
Sbjct: 125 KDTEAKSEEEEVEDKEEEKKLEETS--IMTNKTFESLS--LSDNTYKSIKEMGFARMTQI 180
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
QA+ IPPL+ G D++G+A+TGSGKTLAFL+PAVEL+Y +KF PRNG
Sbjct: 181 QAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRNG 226
>CGD|CAL0003050 [details] [associations]
symbol:HAS1 species:5476 "Candida albicans" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IGI;ISS] [GO:0042274
"ribosomal small subunit biogenesis" evidence=IGI;ISS] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 GO:GO:0042274
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000012
InterPro:IPR025313 Pfam:PF13959 KO:K13179 EMBL:AACQ01000011
RefSeq:XP_721871.1 RefSeq:XP_722031.1 STRING:Q5AK59 GeneID:3636361
GeneID:3636443 KEGG:cal:CaO19.11444 KEGG:cal:CaO19.3962
Uniprot:Q5AK59
Length = 565
Score = 262 (97.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 56/108 (51%), Positives = 74/108 (68%)
Query: 34 EKDSDANEDEDQTNA-VEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
+K D + E T V ++P +D + FE E T+KAI +MGFTKMT
Sbjct: 75 QKAKDEAKLEQLTKPQVSNEVPDNDNDDDSSEDVLFE--NADFSEPTMKAIKEMGFTKMT 132
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+Y+LK PRNG
Sbjct: 133 KVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNG 180
>UNIPROTKB|Q5AK59 [details] [associations]
symbol:HAS1 "ATP-dependent RNA helicase HAS1"
species:237561 "Candida albicans SC5314" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IGI] [GO:0042274 "ribosomal small
subunit biogenesis" evidence=IGI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0003050
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0042274 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACQ01000012 InterPro:IPR025313 Pfam:PF13959 KO:K13179
EMBL:AACQ01000011 RefSeq:XP_721871.1 RefSeq:XP_722031.1
STRING:Q5AK59 GeneID:3636361 GeneID:3636443 KEGG:cal:CaO19.11444
KEGG:cal:CaO19.3962 Uniprot:Q5AK59
Length = 565
Score = 262 (97.3 bits), Expect = 8.0e-22, P = 8.0e-22
Identities = 56/108 (51%), Positives = 74/108 (68%)
Query: 34 EKDSDANEDEDQTNA-VEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
+K D + E T V ++P +D + FE E T+KAI +MGFTKMT
Sbjct: 75 QKAKDEAKLEQLTKPQVSNEVPDNDNDDDSSEDVLFE--NADFSEPTMKAIKEMGFTKMT 132
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
++QA+TIPPLL GRD++G+AKTGSGKTLAFL+PA+EL+Y+LK PRNG
Sbjct: 133 KVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLKIKPRNG 180
>POMBASE|SPAC1F7.02c [details] [associations]
symbol:has1 "ATP-dependent RNA helicase Has1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1F7.02c GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY OrthoDB:EOG4ZKNVS PIR:S62574 RefSeq:NP_594488.1
ProteinModelPortal:Q09916 STRING:Q09916 EnsemblFungi:SPAC1F7.02c.1
GeneID:2541668 KEGG:spo:SPAC1F7.02c NextBio:20802761 Uniprot:Q09916
Length = 578
Score = 255 (94.8 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 56/112 (50%), Positives = 73/112 (65%)
Query: 35 KDSDAN-----EDEDQTNAVEVQLPGSDVALEILSSTQFEALKG-KVCENTLKAIADMGF 88
+D+D N E E+ N E + V L S++ E ++ EN KAI +MGF
Sbjct: 50 EDADQNTSVESESEELDNENEDERVQKSVNLNASSTSDIEKFSDLQLSENIQKAIKEMGF 109
Query: 89 TKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
MTEIQ R+IPPLL GRD++G+AKTGSGKTLAFL+P +E++Y LKF PRNG
Sbjct: 110 ETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALKFKPRNG 161
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 247 (92.0 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 55/108 (50%), Positives = 70/108 (64%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSD-VALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
E+D N ED A LP D V+L + + + E TL+ I +MGF MT
Sbjct: 93 EEDEKDNVKEDSGKANVPDLPSVDAVSLPQPDGGPKKFTELGLSEKTLQGIKEMGFETMT 152
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
EIQ RTIPPLL GRD++G+AKTGSGKTLAFL+PA+E++ L+F PRNG
Sbjct: 153 EIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKPRNG 200
>DICTYBASE|DDB_G0282741 [details] [associations]
symbol:ddx18 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0282741 GO:GO:0005524
GO:GO:0005730 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 InterPro:IPR025313 Pfam:PF13959
RefSeq:XP_640236.1 ProteinModelPortal:Q54S03 STRING:Q54S03
EnsemblProtists:DDB0234194 GeneID:8623775 KEGG:ddi:DDB_G0282741
KO:K13179 OMA:KDGYRSY Uniprot:Q54S03
Length = 602
Score = 237 (88.5 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 60/141 (42%), Positives = 84/141 (59%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
E++ + N D + N E +L S ++E S+ E ENT K+I +MGF KMT
Sbjct: 93 EEEENENNDNNTGNVSEKELGISKESIEF-SNLPIE-------ENTKKSIEEMGFKKMTP 144
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQ--GKLRPLT 151
IQA++I PLLEG+DL+G+A+TGSGKTLAFL+PA+E++ F PRNG R L
Sbjct: 145 IQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRNGTGVIIISPTRELA 204
Query: 152 NGVYLVACNVFK-STQPPTVI 171
+Y VA + K TQ ++
Sbjct: 205 LQIYGVARELMKYHTQTHGIV 225
>TAIR|locus:2086909 [details] [associations]
symbol:AT3G18600 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP001303 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179
OMA:KDGYRSY EMBL:AY070052 EMBL:AY096431 IPI:IPI00544206
RefSeq:NP_188490.1 UniGene:At.28418 ProteinModelPortal:Q9LIH9
SMR:Q9LIH9 STRING:Q9LIH9 PaxDb:Q9LIH9 PRIDE:Q9LIH9 DNASU:821391
EnsemblPlants:AT3G18600.1 GeneID:821391 KEGG:ath:AT3G18600
GeneFarm:1030 TAIR:At3g18600 InParanoid:Q9LIH9 PhylomeDB:Q9LIH9
ProtClustDB:CLSN2914752 Genevestigator:Q9LIH9 GermOnline:AT3G18600
Uniprot:Q9LIH9
Length = 568
Score = 229 (85.7 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 54/108 (50%), Positives = 75/108 (69%)
Query: 34 EKDSDANED-EDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
E+ +A ED ED+ N V V G I+++ F++L + E T AI +MGF MT
Sbjct: 63 EEKVEAMEDGEDEKNIVIV---GKG----IMTNVTFDSLD--LSEQTSIAIKEMGFQYMT 113
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
+IQA +I PLLEG+D++G+A+TGSGKTLAFL+PAVEL++ +F PRNG
Sbjct: 114 QIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVELLFKERFSPRNG 161
>GENEDB_PFALCIPARUM|PFF1500c [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0016070 "RNA metabolic process" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AL844505 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
RefSeq:XP_966291.1 ProteinModelPortal:C6KTE4
EnsemblProtists:PFF1500c:mRNA GeneID:3885813 KEGG:pfa:PFF1500c
EuPathDB:PlasmoDB:PF3D7_0630900 ProtClustDB:CLSZ2514457
Uniprot:C6KTE4
Length = 601
Score = 221 (82.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 48/110 (43%), Positives = 71/110 (64%)
Query: 36 DSDANEDEDQTNAVEVQLPGSDV----ALE-ILSSTQFEALKGKVCENTLKAIADMGFTK 90
D D N D+T E++ SD + E S +FE L +C+ K + ++ F
Sbjct: 116 DHDKN---DKTYTDEIKSNNSDHNNNNSKEHFYSELKFEELN--ICDALKKGLKELNFVT 170
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
+TEIQA+ IP L G+D++G+AKTGSGKTLAFLVP++ ++YN+KF+P+NG
Sbjct: 171 LTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNG 220
>UNIPROTKB|C6KTE4 [details] [associations]
symbol:PFF1500c "DEAD/DEAH box ATP-dependent RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AL844505 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_966291.1
ProteinModelPortal:C6KTE4 EnsemblProtists:PFF1500c:mRNA
GeneID:3885813 KEGG:pfa:PFF1500c EuPathDB:PlasmoDB:PF3D7_0630900
ProtClustDB:CLSZ2514457 Uniprot:C6KTE4
Length = 601
Score = 221 (82.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 48/110 (43%), Positives = 71/110 (64%)
Query: 36 DSDANEDEDQTNAVEVQLPGSDV----ALE-ILSSTQFEALKGKVCENTLKAIADMGFTK 90
D D N D+T E++ SD + E S +FE L +C+ K + ++ F
Sbjct: 116 DHDKN---DKTYTDEIKSNNSDHNNNNSKEHFYSELKFEELN--ICDALKKGLKELNFVT 170
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
+TEIQA+ IP L G+D++G+AKTGSGKTLAFLVP++ ++YN+KF+P+NG
Sbjct: 171 LTEIQAKCIPHFLSGKDILGAAKTGSGKTLAFLVPSINILYNIKFLPKNG 220
>CGD|CAL0004182 [details] [associations]
symbol:HCA4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004182 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 EMBL:AACQ01000023 EMBL:AACQ01000025
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_720233.1 RefSeq:XP_720463.1 ProteinModelPortal:Q5AF95
STRING:Q5AF95 GeneID:3637911 GeneID:3638091 KEGG:cal:CaO19.10227
KEGG:cal:CaO19.2712 KO:K14776 InterPro:IPR025313 Pfam:PF13959
Uniprot:Q5AF95
Length = 765
Score = 182 (69.1 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 41 EDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIP 100
++E++ ++ ++ D + S +QF L + ENTLK + + F +T+IQ +TIP
Sbjct: 23 KEEEELAKLQERINNYDPKTDEASVSQFSDLP--ITENTLKGLKEATFVSLTDIQKKTIP 80
Query: 101 PLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
L+G DL+G+A+TGSGKTLAFL+P +E + K +G
Sbjct: 81 IALKGEDLMGTARTGSGKTLAFLIPVIESLIRNKITEYDG 120
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 174 (66.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 46/124 (37%), Positives = 70/124 (56%)
Query: 32 PAEKDSDANEDEDQ--------TNAVEVQLP-GSDVALE--ILSSTQFEALKGKVCENTL 80
P+E SD +++ D+ AV+ P G V LS T+F+ + +L
Sbjct: 337 PSEDSSDEDDENDEPLIKKAASAKAVQTDKPTGEHVKTSDSYLSKTRFDQFP--LSPLSL 394
Query: 81 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
KAI D GF MT +Q T+P +L+G+D++ AKTG+GKT+AFL+PA+E + +K P +
Sbjct: 395 KAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAV--IKSPPASR 452
Query: 141 KSWQ 144
S Q
Sbjct: 453 DSRQ 456
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 159 (61.0 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
EN L A+ +GFT T+IQA TIPPLL G+D++G A+TG+GKT AF +PA+ I
Sbjct: 24 ENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKI 77
Score = 35 (17.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 161 VFKSTQPPTVIKV 173
+F +T PP + K+
Sbjct: 194 LFSATMPPAIRKI 206
>POMBASE|SPAC1093.05 [details] [associations]
symbol:SPAC1093.05 "ATP-dependent RNA helicase Hca4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1093.05 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 PIR:T50068 RefSeq:NP_594652.1
ProteinModelPortal:Q9UTP9 SMR:Q9UTP9 STRING:Q9UTP9
EnsemblFungi:SPAC1093.05.1 GeneID:2541630 KEGG:spo:SPAC1093.05
NextBio:20802723 Uniprot:Q9UTP9
Length = 735
Score = 170 (64.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
+ +A E + + E++ S + E LS T + + + T A+ + F +TEI
Sbjct: 8 RSREAREKKRKEEEEEIEELNSQI--EALSETVDHFAELPLTQPTKSALKNAHFITLTEI 65
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
Q + IP L+GRD++G+AKTGSGKTLAF+VP +E +Y K+ +G
Sbjct: 66 QKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDG 111
>UNIPROTKB|F1SV16 [details] [associations]
symbol:F1SV16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074980 EMBL:CU930036
Ensembl:ENSSSCT00000016375 OMA:SAREVPM Uniprot:F1SV16
Length = 301
Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T+F L + + TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP
Sbjct: 69 TRFSDLP--LSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVP 126
Query: 126 AVELIYNLKFMPRNG 140
+E +Y L++ +G
Sbjct: 127 VLEALYRLQWTSTDG 141
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 166 (63.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 63 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
++ T F L+ + E+ L+A+ D GFT+ T IQA IPP L+GRD++GSA TG+GKT A+
Sbjct: 1 MTVTTFSELE--LDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAY 58
Query: 123 LVPAVELIYNLKFMPRNGKSWQGKLRPLT 151
L+PA++ + L F PR KS ++ LT
Sbjct: 59 LLPALQHL--LDF-PRK-KSGPPRILILT 83
>SGD|S000003570 [details] [associations]
symbol:HCA4 "DEAD box RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0005730 "nucleolus" evidence=IEA;IC]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA;IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003570
GO:GO:0005524 GO:GO:0005730 EMBL:BK006943 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
OMA:MFERKNQ OrthoDB:EOG4R53B0 EMBL:U72149 EMBL:Z49308 EMBL:AY693118
PIR:S56805 RefSeq:NP_012501.1 ProteinModelPortal:P20448 SMR:P20448
DIP:DIP-6819N IntAct:P20448 MINT:MINT-620511 STRING:P20448
PaxDb:P20448 PeptideAtlas:P20448 EnsemblFungi:YJL033W GeneID:853419
KEGG:sce:YJL033W CYGD:YJL033w GeneTree:ENSGT00550000074980
NextBio:973942 Genevestigator:P20448 GermOnline:YJL033W
Uniprot:P20448
Length = 770
Score = 169 (64.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ + TLK + + F K+TEIQA +IP L+G D++ +AKTGSGKTLAFLVP +E +Y K
Sbjct: 48 ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREK 107
Query: 135 FMPRNG 140
+ +G
Sbjct: 108 WTEFDG 113
>UNIPROTKB|A4RGU2 [details] [associations]
symbol:DBP4 "ATP-dependent RNA helicase DBP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 OrthoDB:EOG4R53B0
RefSeq:XP_003715000.1 ProteinModelPortal:A4RGU2 STRING:A4RGU2
EnsemblFungi:MGG_08049T0 GeneID:2678339 KEGG:mgr:MGG_08049
Uniprot:A4RGU2
Length = 798
Score = 169 (64.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 36/69 (52%), Positives = 47/69 (68%)
Query: 63 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
L ST + + E T K + D F +T+IQAR IP L+GRD++G+AKTGSGKTLAF
Sbjct: 44 LKSTPKAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAF 103
Query: 123 LVPAVELIY 131
LVP +E +Y
Sbjct: 104 LVPLLEKLY 112
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 168 (64.2 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/106 (36%), Positives = 60/106 (56%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
A SD+ EDE++ D ++++T + LK ++++GF T
Sbjct: 224 AAGSSDSEEDEEEIAKKNAFFAEGDKEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPT 283
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMP 137
+IQ +TIP L G+D+VG+A TGSGKT AF+VP +E L+Y K +P
Sbjct: 284 QIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERLLYRPKKVP 329
>UNIPROTKB|F1P0I3 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074980 IPI:IPI00595697
OMA:ADKVIEP EMBL:AADN02005060 Ensembl:ENSGALT00000027709
Uniprot:F1P0I3
Length = 875
Score = 168 (64.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAF+VPA+EL+Y L++
Sbjct: 82 KKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWT 141
Query: 137 PRNG 140
+G
Sbjct: 142 SADG 145
>UNIPROTKB|Q5ZJF6 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
EMBL:AJ720478 IPI:IPI00595697 RefSeq:NP_001073193.1
UniGene:Gga.15096 HSSP:P26196 ProteinModelPortal:Q5ZJF6 SMR:Q5ZJF6
STRING:Q5ZJF6 GeneID:418965 KEGG:gga:418965 CTD:1662
HOVERGEN:HBG102756 InParanoid:Q5ZJF6 OrthoDB:EOG4BK536
NextBio:20822084 Uniprot:Q5ZJF6
Length = 875
Score = 168 (64.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 32/64 (50%), Positives = 49/64 (76%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAF+VPA+EL+Y L++
Sbjct: 82 KKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALELLYRLQWT 141
Query: 137 PRNG 140
+G
Sbjct: 142 SADG 145
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 155 (59.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ GSDV IL+ FE + +C++ K + G+ K+T IQ +IP ++
Sbjct: 267 DKYDDIVVEVSGSDVPPAILT---FE--EANLCDSLAKNVCKSGYVKLTPIQKHSIPIIV 321
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 322 AGRDLMACAQTGSGKTAAFLLP 343
Score = 35 (17.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 160 NVFKSTQPPTVIKVQTLIF 178
N+ KS+ P+ + QTL+F
Sbjct: 460 NLLKSSGMPSKEERQTLMF 478
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 162 (62.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 66 TQFEAL-KGKVCENTLKAIA-DMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
T+F L K + E+ +KAI DM + MT++Q+ T+ P L+G+DLV AKTG+GKTLAFL
Sbjct: 74 TKFSDLAKANIDESIIKAITVDMRYEDMTDVQSMTLAPALKGKDLVAQAKTGTGKTLAFL 133
Query: 124 VPAVELI 130
+P ++ I
Sbjct: 134 IPVIQKI 140
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 162 (62.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 40/111 (36%), Positives = 66/111 (59%)
Query: 34 EKDSDANEDEDQTNAVEVQL------PGSDVALEILSSTQFEALKGKVCENTLKAIADMG 87
+++S++ +DED+ A +++ P SD + F+++ + L+ + +G
Sbjct: 220 DQESESEQDEDEEEAAKMKEFFAADEPKSDTNK---GNASFQSMS--LSRPILRGLTSVG 274
Query: 88 FTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMP 137
F K T IQ++TIP L G+D+VG A TGSGKT AF+VP +E L+Y K +P
Sbjct: 275 FAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLYRPKKVP 325
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 158 (60.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 63 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
LS T+F+ + TLK I D GF MT +Q T+P +L+G+D++ AKTG+GKT+AF
Sbjct: 77 LSKTRFDQFP--LSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAF 134
Query: 123 LVPAVELI 130
L+P++E +
Sbjct: 135 LLPSIEAV 142
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 158 (60.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+N L+AIA +GFT+ T IQA+ P L+GRDL+G A+TGSGKTLA+L+PA + ++
Sbjct: 174 DNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA---LVHVSAQ 230
Query: 137 PRNGK 141
PR G+
Sbjct: 231 PRLGQ 235
>UNIPROTKB|E9PIF2 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 HGNC:HGNC:2735 ChiTaRS:DDX10 EMBL:AP002453
EMBL:AP003027 EMBL:AP003387 IPI:IPI00982941
ProteinModelPortal:E9PIF2 SMR:E9PIF2 Ensembl:ENST00000526794
UCSC:uc001pkl.1 ArrayExpress:E9PIF2 Bgee:E9PIF2 Uniprot:E9PIF2
Length = 835
Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 STDG 141
>UNIPROTKB|E2RC35 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 GeneTree:ENSGT00550000074980
CTD:1662 OMA:ADKVIEP EMBL:AAEX03003508 RefSeq:XP_536583.2
Ensembl:ENSCAFT00000022758 GeneID:479448 KEGG:cfa:479448
Uniprot:E2RC35
Length = 871
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 STDG 141
>RGD|1308990 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1308990
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 CTD:1662 OrthoDB:EOG4BK536 OMA:ADKVIEP
IPI:IPI00869603 RefSeq:NP_001100290.1 UniGene:Rn.99481
Ensembl:ENSRNOT00000017683 GeneID:300710 KEGG:rno:300710
UCSC:RGD:1308990 NextBio:647348 Uniprot:D3ZBY5
Length = 874
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 STDG 141
>UNIPROTKB|Q13206 [details] [associations]
symbol:DDX10 "Probable ATP-dependent RNA helicase DDX10"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471065
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 CTD:1662 HOVERGEN:HBG102756 OrthoDB:EOG4BK536
EMBL:U28042 EMBL:AB040537 EMBL:AK315216 EMBL:BC091521 EMBL:BC093654
EMBL:BC093656 IPI:IPI00297900 RefSeq:NP_004389.2 UniGene:Hs.591931
PDB:2PL3 PDBsum:2PL3 ProteinModelPortal:Q13206 SMR:Q13206
IntAct:Q13206 STRING:Q13206 PhosphoSite:Q13206 DMDM:76803554
SWISS-2DPAGE:Q13206 PaxDb:Q13206 PeptideAtlas:Q13206 PRIDE:Q13206
Ensembl:ENST00000322536 GeneID:1662 KEGG:hsa:1662 UCSC:uc001pkm.3
GeneCards:GC11P108569 HGNC:HGNC:2735 HPA:HPA004691 MIM:601235
neXtProt:NX_Q13206 PharmGKB:PA27200 InParanoid:Q13206 OMA:ADKVIEP
ChiTaRS:DDX10 EvolutionaryTrace:Q13206 GenomeRNAi:1662 NextBio:6838
ArrayExpress:Q13206 Bgee:Q13206 CleanEx:HS_DDX10
Genevestigator:Q13206 GermOnline:ENSG00000178105 Uniprot:Q13206
Length = 875
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 STDG 141
>MGI|MGI:1924841 [details] [associations]
symbol:Ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 10"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1924841 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP ChiTaRS:DDX10 EMBL:BC049261
IPI:IPI00896604 RefSeq:NP_084212.2 UniGene:Mm.133560
ProteinModelPortal:Q80Y44 SMR:Q80Y44 STRING:Q80Y44
PhosphoSite:Q80Y44 PaxDb:Q80Y44 PRIDE:Q80Y44
Ensembl:ENSMUST00000065630 GeneID:77591 KEGG:mmu:77591
UCSC:uc009plz.2 InParanoid:Q80Y44 NextBio:347162 Bgee:Q80Y44
CleanEx:MM_DDX10 Genevestigator:Q80Y44
GermOnline:ENSMUSG00000053289 Uniprot:Q80Y44
Length = 875
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 STDG 141
>UNIPROTKB|Q08DT0 [details] [associations]
symbol:DDX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
GeneTree:ENSGT00550000074980 CTD:1662 HOVERGEN:HBG102756
OrthoDB:EOG4BK536 OMA:ADKVIEP EMBL:DAAA02040206 EMBL:DAAA02040207
EMBL:DAAA02040208 EMBL:DAAA02040209 EMBL:DAAA02040210
EMBL:DAAA02040211 EMBL:DAAA02040212 EMBL:DAAA02040213
EMBL:DAAA02040214 EMBL:DAAA02040215 EMBL:DAAA02040216
EMBL:DAAA02040217 EMBL:BC123579 IPI:IPI00717487
RefSeq:NP_001070349.1 UniGene:Bt.63620 SMR:Q08DT0
Ensembl:ENSBTAT00000003086 GeneID:528483 KEGG:bta:528483
InParanoid:Q08DT0 NextBio:20874836 Uniprot:Q08DT0
Length = 876
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + +TEIQ +TI L+G+D++G+AKTGSGKTLAFLVP +E +Y L++
Sbjct: 78 KKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWT 137
Query: 137 PRNG 140
+G
Sbjct: 138 SADG 141
>CGD|CAL0005900 [details] [associations]
symbol:MAK5 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0005900 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14805
RefSeq:XP_714899.1 RefSeq:XP_714962.1 ProteinModelPortal:Q59ZH9
STRING:Q59ZH9 GeneID:3643358 GeneID:3643454 KEGG:cal:CaO19.11024
KEGG:cal:CaO19.3540 Uniprot:Q59ZH9
Length = 782
Score = 159 (61.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 34 EKDSDANEDEDQTNAVE---VQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTK 90
+KD E D+ NAV + LP D L + Q L + TL ++ + F K
Sbjct: 160 DKDDKLAESNDELNAVSFANLDLPLPDDNEINLPNWQEGDLGSSISAYTLYGLSQLDFKK 219
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPRNGK 141
T IQ TIP L G+D++G A TGSGKTLA+ +P +E I +L + +N K
Sbjct: 220 PTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQNNK 271
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+AI +MGF++ T++QA IP L+GRD++ SA TG+GKT AF++PA++ Y L F PR
Sbjct: 15 LEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPALQ--YLLDF-PRR 71
Query: 140 GKSWQGKLRPLT 151
K+ ++ LT
Sbjct: 72 -KAGPARILILT 82
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 154 (59.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+AI +MGF++ T++QA IP L+GRD++ SA TG+GKT AF++PA++ Y L F PR
Sbjct: 15 LEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTGTGKTAAFVIPALQ--YLLDF-PRR 71
Query: 140 GKSWQGKLRPLT 151
K+ ++ LT
Sbjct: 72 -KAGPARILILT 82
>POMBASE|SPCC1494.06c [details] [associations]
symbol:SPCC1494.06c "ATP-dependent RNA helicase Dbp9
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1494.06c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14810
HOGENOM:HOG000253015 OMA:TFLMSAT OrthoDB:EOG4DFSWQ PIR:T41007
RefSeq:NP_588531.1 ProteinModelPortal:O60080 SMR:O60080
STRING:O60080 EnsemblFungi:SPCC1494.06c.1 GeneID:2538776
KEGG:spo:SPCC1494.06c NextBio:20799959 Uniprot:O60080
Length = 595
Score = 142 (55.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 81 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+AI F K T +Q+ TIP LEG+DLV A+TGSGKT A+L+P +EL+ K + N
Sbjct: 27 RAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILELLLKQKQIDEN 85
Score = 37 (18.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 145 GKLRPLTNGVYLVACNVFKSTQPPTVIKVQ 174
G++ L N V V V ST PT+ K++
Sbjct: 324 GEIEELENNVDFVEEEVI-STDQPTLDKMK 352
>UNIPROTKB|F8WEI3 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC004938 HGNC:HGNC:18193
IPI:IPI00925260 ProteinModelPortal:F8WEI3 SMR:F8WEI3
Ensembl:ENST00000415758 ArrayExpress:F8WEI3 Bgee:F8WEI3
Uniprot:F8WEI3
Length = 103
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/73 (38%), Positives = 50/73 (68%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K +
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRKASCAD 78
Query: 140 GKSWQGKLRPLTN 152
G++ G P+++
Sbjct: 79 GEARCGSRDPISH 91
>ASPGD|ASPL0000061778 [details] [associations]
symbol:AN0589 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14776
InterPro:IPR025313 Pfam:PF13959 RefSeq:XP_658193.1
ProteinModelPortal:Q5BFU1 SMR:Q5BFU1 STRING:Q5BFU1
EnsemblFungi:CADANIAT00002085 GeneID:2876356 KEGG:ani:AN0589.2
HOGENOM:HOG000268801 OMA:MFERKNQ OrthoDB:EOG4R53B0 Uniprot:Q5BFU1
Length = 812
Score = 157 (60.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ E TL + F +T+IQ+R I L+GRD++G+AKTGSGKTLAFLVP +E +Y +
Sbjct: 55 ISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILENLYRKQ 114
Query: 135 FMPRNG 140
+ +G
Sbjct: 115 WSDHDG 120
>ASPGD|ASPL0000034540 [details] [associations]
symbol:spb4 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001306 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AACD01000052
HOGENOM:HOG000268803 KO:K14809 OMA:CACVEYW RefSeq:XP_660780.1
ProteinModelPortal:Q5B8F4 STRING:Q5B8F4
EnsemblFungi:CADANIAT00009893 GeneID:2873958 KEGG:ani:AN3176.2
OrthoDB:EOG46MFT3 Uniprot:Q5B8F4
Length = 638
Score = 155 (59.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
SS ++A+ + E L A++ MGFT+MT +QA IP + +D+V A TGSGKTL+FL
Sbjct: 10 SSRAWDAVNPPLSEWVLDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFL 69
Query: 124 VPAVELIYNLK 134
+P VE + L+
Sbjct: 70 IPVVEKLLRLE 80
>UNIPROTKB|H0Y960 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:18700 EMBL:AC016632 Ensembl:ENST00000503129
Uniprot:H0Y960
Length = 305
Score = 149 (57.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 175 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 229
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 230 AGRDLMACAQTGSGKTAAFLLP 251
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 155 (59.6 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 34/89 (38%), Positives = 54/89 (60%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V + G DV IL+ FE + +CE + +A G+ K+T +Q +IP ++
Sbjct: 255 DKYDEILVDVTGKDVPPAILT---FE--EANLCETLRRNVARAGYVKLTPVQKHSIPIIM 309
Query: 104 EGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
GRDL+ A+TGSGKT AFL+P + + N
Sbjct: 310 AGRDLMACAQTGSGKTAAFLLPILSYMMN 338
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 156 (60.0 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
S+T F+ L + + TLKA+ + F K+T+IQ ++P L GRD++G+AKTGSGKTL+F+
Sbjct: 139 SATDFKDLP--ISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFI 196
Query: 124 VPAVELIY 131
+P +E ++
Sbjct: 197 LPILETLW 204
>UNIPROTKB|F1SLL4 [details] [associations]
symbol:LOC100626422 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000018419 OMA:DEESIFA Uniprot:F1SLL4
Length = 232
Score = 144 (55.7 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G + IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 110 DKYDTILVEVSGHEAPPAILT---FE--EANLCQTLNSNIAKAGYTKLTPVQKYSIPIIL 164
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 165 GGRDLMACAQTGSGKTAAFLLP 186
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 156 (60.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 44/110 (40%), Positives = 65/110 (59%)
Query: 33 AEKDSDANEDEDQTNA--VEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTK 90
+++D +A E QT+A L G V F+A+ G + N LKAIA GF+
Sbjct: 60 SDEDDEAFIAEKQTSANRKSANLKGRTVK----KGGGFQAM-G-LNANLLKAIARKGFSV 113
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI--YNLKFMPR 138
T IQ +TIP ++E +D+VG A+TGSGKT AF++P +E + ++ KF R
Sbjct: 114 PTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGAR 163
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 134 (52.2 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 336 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 381
Score = 39 (18.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D+ + E + G+++ E L E +K +V + ++++ G
Sbjct: 148 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGG 203
Score = 37 (18.1 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 86 KKDKDDKEDEKEKDA 100
>TAIR|locus:2160225 [details] [associations]
symbol:AT5G54910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AB005232 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14776 InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268801
IPI:IPI00527032 RefSeq:NP_200302.1 UniGene:At.29471
ProteinModelPortal:Q9FFT9 SMR:Q9FFT9 STRING:Q9FFT9 PaxDb:Q9FFT9
PRIDE:Q9FFT9 EnsemblPlants:AT5G54910.1 GeneID:835582
KEGG:ath:AT5G54910 GeneFarm:988 TAIR:At5g54910 InParanoid:Q9FFT9
OMA:PEDGVGC PhylomeDB:Q9FFT9 ProtClustDB:CLSN2686959
Genevestigator:Q9FFT9 GermOnline:AT5G54910 Uniprot:Q9FFT9
Length = 739
Score = 154 (59.3 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 36/109 (33%), Positives = 58/109 (53%)
Query: 32 PAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
P KDS + ED N V +F L + + T + + D + M
Sbjct: 45 PLPKDSKIGKSEDGKNGT--------VFSRYAGVRKFAQLP--ISDKTKRGLKDAKYVDM 94
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNG 140
T++Q+ IP L GRD++G+A+TGSGKTLAF++P +E ++ ++ P +G
Sbjct: 95 TDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDG 143
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 139 (54.0 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ I G+TK+T +Q IP +L
Sbjct: 247 DKYDTILVEVSGHDAPPAILT---FE--ETDLCQTLNNDITKAGYTKLTPVQKYGIPIIL 301
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 302 AGRDLMACAQTGSGKTAAFLLP 323
Score = 38 (18.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 129 LIYNLKFMPRNGKSWQGK-LRPLTNGVYLVA 158
L+++ F N K W G+ L+ LT + LVA
Sbjct: 456 LMFSATFPRGNFKDWAGEFLKNLT--ICLVA 484
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 154 (59.3 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/64 (46%), Positives = 46/64 (71%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ TLK + + + + TEIQ +TI L+GRD++G+AKTGSGKTLAFL+P +E +Y ++
Sbjct: 79 KKTLKGLLEAQYRQPTEIQRQTIGFALQGRDVLGAAKTGSGKTLAFLIPVLECLYREQWT 138
Query: 137 PRNG 140
+G
Sbjct: 139 AMDG 142
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 155 (59.6 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/91 (40%), Positives = 55/91 (60%)
Query: 37 SD-ANEDEDQTNAVEVQLPGSDV-ALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
SD A E++ + ++L G V L++ Q + G + TL I +GF +T I
Sbjct: 509 SDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQ-TLDVIDKLGFASLTSI 567
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
QA+ IP ++ GRD++G AKTGSGKT+AFL+P
Sbjct: 568 QAQAIPAIMSGRDVIGVAKTGSGKTMAFLIP 598
>MGI|MGI:2182303 [details] [associations]
symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
CleanEx:MM_DDX50 Genevestigator:Q99MJ9
GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
Length = 734
Score = 141 (54.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/98 (35%), Positives = 53/98 (54%)
Query: 36 DSDANEDEDQTNAV---EVQLPGSDVALEILSSTQFE-ALKG-KVCENTLKAIADMGFTK 90
+ D +E E ++ V E SD A E L+ Q E A + E T+K + G T
Sbjct: 97 NGDVDEYEKRSKRVSSSENSHKSSDKAEETLTREQKEGAFSNFSISEETIKLLKGRGVTY 156
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+ IQ +T P+ EG+DL+ A+TG+GKT +F +P +E
Sbjct: 157 LFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIE 194
Score = 34 (17.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 140 GKSWQGKLRPLTNGV 154
G S+Q ++ + NG+
Sbjct: 243 GTSYQSQINQIRNGI 257
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 42/131 (32%), Positives = 70/131 (53%)
Query: 37 SDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQA 96
S A DE + + +++ G D + S +Q G + T+ I +G+ K T IQA
Sbjct: 392 SPAEVDELRASLDGIKIRGIDCPKPVTSWSQC----G-LSAQTISVINSLGYEKPTSIQA 446
Query: 97 RTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPLTNGVYL 156
+ IP + GRD++G AKTGSGKT+AFL+P + ++K R K+ +G + +
Sbjct: 447 QAIPAITSGRDVIGVAKTGSGKTIAFLLP---MFRHIKDQ-RPLKTGEGPIAIIMTPTRE 502
Query: 157 VACNVFKSTQP 167
+A +F+ +P
Sbjct: 503 LAVQIFRECKP 513
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 249 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 303
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 304 AGRDLMACAQTGSGKTAAFLLP 325
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 151 (58.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 79 TLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
TL+ + D +TK TEIQ TI L G D+VG+AKTGSGKTLA ++P +E ++ K+ P
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPD 146
Query: 139 NG 140
G
Sbjct: 147 YG 148
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 147 (56.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 32/78 (41%), Positives = 52/78 (66%)
Query: 74 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL 133
K+ L AIAD+G+TK T IQ + IP +L G+D++ +A+TG+GKT +F++P +E + N
Sbjct: 7 KLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQL-NS 65
Query: 134 KFMPRNGKSWQGK-LRPL 150
++ GK + K +R L
Sbjct: 66 QYK-ETGKKLRAKRIRAL 82
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 148 (57.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 31/100 (31%), Positives = 59/100 (59%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKG-KVCENTLKAIADMGFTKMT 92
+++++ N+ E ++ S ++ + +F+ K + + L++I M FTK T
Sbjct: 88 QENANHNQTESSLSSSSSTTSSSITTIDPDAELKFKTFKELNLVPDLLESIESMKFTKPT 147
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
IQ+ IP LEG+D++G A+TGSGKT AF +P ++ +++
Sbjct: 148 PIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWH 187
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/69 (47%), Positives = 48/69 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F+ L G + + +KAI MGF + T IQA+TIP L+ +D++G A+TG+GKT AF +P
Sbjct: 2 TTFQEL-G-LSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIP 59
Query: 126 AVELIYNLK 134
VE + N+K
Sbjct: 60 IVEKV-NVK 67
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 135 (52.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L A+ + K T IQA+ IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 369 LNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 414
Score = 42 (19.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 32 PAEKDSDANEDEDQTNAVEVQ 52
PA + D +++E+Q A E +
Sbjct: 179 PAPVEPDGDDEEEQDKAAEAE 199
>ZFIN|ZDB-GENE-021212-1 [details] [associations]
symbol:ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
55" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021212-1 GO:GO:0007275 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AF506203 EMBL:BC059534 IPI:IPI00493927 RefSeq:NP_775336.1
UniGene:Dr.16883 ProteinModelPortal:Q8JHJ2 STRING:Q8JHJ2
GeneID:286745 KEGG:dre:286745 InParanoid:Q8JHJ2 NextBio:20806420
ArrayExpress:Q8JHJ2 Uniprot:Q8JHJ2
Length = 593
Score = 148 (57.2 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 27/71 (38%), Positives = 49/71 (69%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ ++ +L K+ +N L+ + ++GFT MT +Q+ IP + +D+ A TGSGKT
Sbjct: 1 MENITDGKWGSLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++PA+E++
Sbjct: 61 LAFVIPALEIL 71
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 149 (57.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 249 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 303
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 304 AGRDLMACAQTGSGKTAAFLLP 325
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 150 (57.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+ L+AI GF T IQ +TIP LLEGRD+VG A+TGSGKT AF++P +E
Sbjct: 78 QTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIE 129
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 267 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 321
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 322 AGRDLMACAQTGSGKTAAFLLP 343
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 269 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 323
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 324 AGRDLMACAQTGSGKTAAFLLP 345
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 270 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 324
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 325 AGRDLMACAQTGSGKTAAFLLP 346
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 149 (57.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 270 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIL 324
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 325 AGRDLMACAQTGSGKTAAFLLP 346
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 134 (52.2 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 42 (19.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 13/56 (23%), Positives = 29/56 (51%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D+ + E + G++V E L E +K +V + ++++ G
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEVEGEELDPLDAYMEEVKEEVKKFNMRSVKGGG 251
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 146 (56.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
SS F +L K ++ +K ++ +G+ +MT IQA+T+P LL+G+D++G AKTGSGKT AF
Sbjct: 8 SSLAFSSLSLK--QDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAF 64
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 146 (56.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
SS F +L K ++ +K ++ +G+ +MT IQA+T+P LL+G+D++G AKTGSGKT AF
Sbjct: 8 SSLAFSSLSLK--QDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAF 64
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 148 (57.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 243 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVL 297
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 298 AGRDLMACAQTGSGKTAAFLLP 319
>UNIPROTKB|F8WDT8 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC004938 HGNC:HGNC:18193 IPI:IPI00925990
ProteinModelPortal:F8WDT8 SMR:F8WDT8 Ensembl:ENST00000446987
ArrayExpress:F8WDT8 Bgee:F8WDT8 Uniprot:F8WDT8
Length = 185
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRK 73
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 148 (57.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 242 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVL 296
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 297 AGRDLMACAQTGSGKTAAFLLP 318
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 148 (57.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 254 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVL 308
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 309 AGRDLMACAQTGSGKTAAFLLP 330
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 148 (57.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 34/82 (41%), Positives = 51/82 (62%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +L
Sbjct: 254 DKYDTILVEVSGHDAPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIVL 308
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 309 AGRDLMACAQTGSGKTAAFLLP 330
>TAIR|locus:2825324 [details] [associations]
symbol:AT1G71370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0003723 EMBL:AC016163 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AK118294 IPI:IPI00527105
RefSeq:NP_177293.1 UniGene:At.70349 ProteinModelPortal:Q8GXD6
SMR:Q8GXD6 PRIDE:Q8GXD6 EnsemblPlants:AT1G71370.1 GeneID:843478
KEGG:ath:AT1G71370 GeneFarm:1028 TAIR:At1g71370 InParanoid:Q8GXD6
OMA:EYLKCEA PhylomeDB:Q8GXD6 ProtClustDB:CLSN2914591
Genevestigator:Q8GXD6 GermOnline:AT1G71370 Uniprot:Q8GXD6
Length = 558
Score = 146 (56.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 67 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 126
+F LK + E+ ++A+ GF T +QA TIP L +D+V A TGSGKTLAFL+P
Sbjct: 15 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF 74
Query: 127 VELIYNLKFMPRNGKSWQGKL----RPLTNGVYLVACNVFKSTQP 167
+E+I P G + R L+ ++ VA F ST P
Sbjct: 75 IEIIRRSNSYPPKPHQVMGVIISPTRELSAQIHKVA-EPFVSTLP 118
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 137 (53.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L A+ G+ K T IQ++ IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 383 LTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLP 428
Score = 37 (18.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D E + G++V E L E +K +V + ++++ G
Sbjct: 195 KKWSLEDDDDDDEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKFNMRSVKGGG 250
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 134 (52.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 32 PAEKDSDANEDEDQ 45
PAE + + NE ED+
Sbjct: 210 PAEAEKEGNEMEDE 223
Score = 38 (18.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAI 83
+K S ++D+D+ + E + G+++ E L E +K +V + ++++
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSV 247
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 134 (52.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 40 (19.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 32 PAEKDSDANEDEDQ 45
PAE + + NE ED+
Sbjct: 210 PAEAEKEGNEMEDE 223
Score = 38 (18.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAI 83
+K S ++D+D+ + E + G+++ E L E +K +V + ++++
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPLDAYMEEVKEEVKKFNMRSV 247
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|E7EX41 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC055713 EMBL:AC117503 HGNC:HGNC:20085 ChiTaRS:DDX55
IPI:IPI01018972 ProteinModelPortal:E7EX41 SMR:E7EX41
Ensembl:ENST00000354291 ArrayExpress:E7EX41 Bgee:E7EX41
Uniprot:E7EX41
Length = 191
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 134 (52.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 39 (18.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D+ + E + G+++ E L E +K +V + ++++ G
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGG 251
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 134 (52.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 39 (18.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D+ + E + G+++ E L E +K +V + ++++ G
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGG 251
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 134 (52.2 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 39 (18.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAIADMG 87
+K S ++D+D+ + E + G+++ E L E +K +V + ++++ G
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGG 251
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
>UNIPROTKB|Q5ZLN8 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
EMBL:AJ719696 IPI:IPI00590534 RefSeq:NP_001006185.1
UniGene:Gga.42731 ProteinModelPortal:Q5ZLN8 STRING:Q5ZLN8
PRIDE:Q5ZLN8 GeneID:416820 KEGG:gga:416820 InParanoid:Q5ZLN8
NextBio:20820225 Uniprot:Q5ZLN8
Length = 591
Score = 144 (55.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ + +L + L+A+ D+GF +MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEAVTEGGWSSLPVALSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>TAIR|locus:2054688 [details] [associations]
symbol:AT2G07750 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AC004483 IPI:IPI00546939 PIR:E84488
RefSeq:NP_178818.1 UniGene:At.52694 ProteinModelPortal:O80792
SMR:O80792 PaxDb:O80792 PRIDE:O80792 EnsemblPlants:AT2G07750.1
GeneID:815422 KEGG:ath:AT2G07750 GeneFarm:994 TAIR:At2g07750
InParanoid:O80792 OMA:FRKTALK PhylomeDB:O80792
ProtClustDB:CLSN2713541 Genevestigator:O80792 GermOnline:AT2G07750
Uniprot:O80792
Length = 845
Score = 146 (56.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 38 DANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQAR 97
D ++ + N +E + D I S+ +F+ + + TLKA++ G KMT +Q
Sbjct: 350 DLSKKQSVDNVMEEKQEPHD---SIYSAKRFD--ESCISPLTLKALSASGIVKMTRVQDA 404
Query: 98 TIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPL 150
T+ L+G+D + AKTG+GK++AFL+PA+E + LK M +GK K+ P+
Sbjct: 405 TLSECLDGKDALVKAKTGTGKSMAFLLPAIETV--LKAM-NSGKGVH-KVAPI 453
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 134 (52.2 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
L ++ G+ K T IQ + IP ++ GRDL+G AKTGSGKT+AFL+P
Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLP 429
Score = 38 (18.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILS--STQFEALKGKVCENTLKAI 83
+K S ++D+D+ + E + G+++ E L E +K +V + ++++
Sbjct: 196 KKWSLEDDDDDEDDPAEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSV 247
Score = 37 (18.1 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 34 EKDSDANEDEDQTNA 48
+KD D EDE + +A
Sbjct: 134 KKDKDDKEDEKEKDA 148
Score = 34 (17.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 32 PAEKDSDANEDEDQ 45
PAE + + E ED+
Sbjct: 210 PAEAEKEGTEMEDE 223
>SGD|S000003931 [details] [associations]
symbol:DRS1 "Nucleolar DEAD-box protein required for ribosome
assembly and function" species:4932 "Saccharomyces cerevisiae"
[GO:0000027 "ribosomal large subunit assembly" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000003931 GO:GO:0005524 GO:GO:0005730
EMBL:BK006945 GO:GO:0003723 GO:GO:0030687 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 EMBL:X91488
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
KO:K13181 OrthoDB:EOG4B01XM EMBL:L00683 EMBL:Z73113 PIR:S64750
RefSeq:NP_013093.1 ProteinModelPortal:P32892 SMR:P32892
DIP:DIP-6471N IntAct:P32892 MINT:MINT-648259 STRING:P32892
PaxDb:P32892 PeptideAtlas:P32892 EnsemblFungi:YLL008W GeneID:850652
KEGG:sce:YLL008W CYGD:YLL008w OMA:RIRKRDH NextBio:966605
Genevestigator:P32892 GermOnline:YLL008W Uniprot:P32892
Length = 752
Score = 145 (56.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 35/102 (34%), Positives = 58/102 (56%)
Query: 35 KDSDANEDEDQTNA-VEVQLP---GSDVALEILSSTQFEALKGKVCENTLKAIADMGFTK 90
KD + +E++D A + P G + ++ + F +L + LK +A +G+ K
Sbjct: 198 KDDEIDEEDDSEEAKADFYAPETEGDEAKKQMYEN--FNSLS--LSRPVLKGLASLGYVK 253
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIY 131
+ IQ+ TIP L G+D++ A TGSGKT AF++P +E L+Y
Sbjct: 254 PSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLY 295
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 134 (52.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
E +KA+ +T+ T IQA+ +P L GRD++G AKTGSGKT AF+ P + + + K +
Sbjct: 278 EQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQL 337
Query: 137 -PRNG 140
P +G
Sbjct: 338 KPGDG 342
Score = 35 (17.4 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 33 AEKDSDANEDED 44
A+K D++ DED
Sbjct: 122 AKKQEDSDSDED 133
>SGD|S000002602 [details] [associations]
symbol:MSS116 "DEAD-box protein involved splicing of
mitochondrial introns" species:4932 "Saccharomyces cerevisiae"
[GO:0000373 "Group II intron splicing" evidence=IMP;IDA]
[GO:0003723 "RNA binding" evidence=IEA;IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA;IMP] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0000372 "Group I intron
splicing" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0034337 "RNA folding" evidence=IMP] [GO:0033592
"RNA strand annealing activity" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002602
GO:GO:0005524 GO:GO:0006417 GO:GO:0005759 GO:GO:0006397
EMBL:BK006938 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 EMBL:Z48784 GO:GO:0000373 GO:GO:0000372
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00700000105515 GO:GO:0033592 OrthoDB:EOG437VPN
PIR:S02116 RefSeq:NP_010480.1 PDB:3I5X PDB:3I5Y PDB:3I61 PDB:3I62
PDB:3SQW PDB:3SQX PDB:4DB2 PDB:4DB4 PDBsum:3I5X PDBsum:3I5Y
PDBsum:3I61 PDBsum:3I62 PDBsum:3SQW PDBsum:3SQX PDBsum:4DB2
PDBsum:4DB4 ProteinModelPortal:P15424 SMR:P15424 DIP:DIP-5368N
IntAct:P15424 MINT:MINT-525340 STRING:P15424 PaxDb:P15424
PeptideAtlas:P15424 EnsemblFungi:YDR194C GeneID:851775
KEGG:sce:YDR194C CYGD:YDR194c HOGENOM:HOG000113654 OMA:PEAHENI
EvolutionaryTrace:P15424 NextBio:969573 Genevestigator:P15424
GermOnline:YDR194C GO:GO:0034337 Uniprot:P15424
Length = 664
Score = 144 (55.7 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 35/104 (33%), Positives = 58/104 (55%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
E D + + D+ + + + +P D + E+ + E +G + + KAI M F +T
Sbjct: 75 EDDDEVHFDKTTFSKL-IHVPKEDNSKEVTLDSLLE--EGVLDKEIHKAITRMEFPGLTP 131
Query: 94 IQARTIPPLL--EGRDLVGSAKTGSGKTLAFLVPAVELIYNLKF 135
+Q +TI P+L E D++ AKTG+GKT AFL+P + + N KF
Sbjct: 132 VQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKF 175
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 142 (55.0 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 53 NKHKIHVQGTDLPDPITTFQQLDQ-EYKISSRLLQNILDAGFQLPTPIQMQAIPVMLHGR 111
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ LK P N
Sbjct: 112 ELLASAPTGSGKTLAFSIP---ILMQLK-QPTN 140
>SGD|S000000346 [details] [associations]
symbol:MAK5 "Essential nucleolar protein" species:4932
"Saccharomyces cerevisiae" [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000000346 GO:GO:0005524 GO:GO:0005730
EMBL:BK006936 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000463 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000466 KO:K14805
HOGENOM:HOG000290702 GeneTree:ENSGT00550000074847 EMBL:X78937
OrthoDB:EOG44J5S7 EMBL:Z36011 PIR:S46011 RefSeq:NP_009700.1
ProteinModelPortal:P38112 SMR:P38112 DIP:DIP-6337N IntAct:P38112
MINT:MINT-612928 STRING:P38112 PaxDb:P38112 PeptideAtlas:P38112
EnsemblFungi:YBR142W GeneID:852439 KEGG:sce:YBR142W CYGD:YBR142w
OMA:HLPRAAD NextBio:971336 Genevestigator:P38112 GermOnline:YBR142W
Uniprot:P38112
Length = 773
Score = 144 (55.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 39/113 (34%), Positives = 64/113 (56%)
Query: 32 PAEK-DSDANEDEDQTNAVEVQLPGSDVA-LEILSSTQFEALKGKVCENTLKAIADMGFT 89
P+E D D +ED + N + D++ + + T L + L+++ ++ F
Sbjct: 137 PSEDVDEDVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTI----LQSLQNLNFL 192
Query: 90 KMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPRNGK 141
+ TEIQ ++IP +++G D++G A TGSGKTLA+ +P VE LI N F +N K
Sbjct: 193 RPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVEKLISN--FSQKNKK 243
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 131 (51.2 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 88 FTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
++K T IQA+ IP ++ GRD++G AKTGSGKTLAFL+P
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLP 361
Score = 39 (18.8 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 34 EKDSDAN---EDEDQTNAVEVQLPGSDVALEILSSTQFEALKG 73
EK DA E E +T E++ +D E++ + E L+G
Sbjct: 60 EKQRDAEKKKEKESKTAIFEMEESRNDTE-EVMKMKEAELLQG 101
>TAIR|locus:2038431 [details] [associations]
symbol:AT1G63250 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 EMBL:AC022355 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 UniGene:At.52694 ProtClustDB:CLSN2713541
IPI:IPI00538833 PIR:C96658 RefSeq:NP_176514.1 UniGene:At.36158
ProteinModelPortal:Q9C8S9 SMR:Q9C8S9 PaxDb:Q9C8S9 PRIDE:Q9C8S9
EnsemblPlants:AT1G63250.1 GeneID:842631 KEGG:ath:AT1G63250
GeneFarm:1027 TAIR:At1g63250 InParanoid:Q9C8S9 OMA:TSSRAHI
PhylomeDB:Q9C8S9 Genevestigator:Q9C8S9 GermOnline:AT1G63250
Uniprot:Q9C8S9
Length = 798
Score = 144 (55.7 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 39/113 (34%), Positives = 65/113 (57%)
Query: 38 DANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQAR 97
D ++ + N +E + D I S+ +F+ + + TLKA++ G KMT +Q
Sbjct: 303 DLSKRKSVDNVMEEKQEPHD---SIYSAKRFD--ESCISPLTLKALSASGILKMTRVQDA 357
Query: 98 TIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPL 150
T+ L+G+D + AKTG+GK++AFL+PA+E + LK M +GK K+ P+
Sbjct: 358 TLSECLDGKDALVKAKTGTGKSMAFLLPAIETV--LKAM-NSGKG-VNKVAPI 406
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 144 (55.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 39/106 (36%), Positives = 55/106 (51%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
AE + DA E+ + + + A + F+ + L+ +A + FT T
Sbjct: 265 AESEVDAEEEAKRKAFFAPEEKTDEDAATNSAKRSFQEFN--LSRPILRGLAAVNFTNPT 322
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
IQ +TIP L G+D+VGSA TGSGKT AF+VP +E L F PR
Sbjct: 323 PIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE---RLLFRPR 365
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 141 (54.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 37 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGR 95
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ LK P N
Sbjct: 96 ELLASAPTGSGKTLAFSIP---ILMQLK-QPAN 124
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 141 (54.7 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 34/109 (31%), Positives = 64/109 (58%)
Query: 33 AEKD--SDANEDEDQTNAVEVQLPG---SDVALEILSSTQFEALKG----KVCENTLKAI 83
AEK+ S+++ +ED T + L S V+ + ++ + E+ + + ++A
Sbjct: 37 AEKEGGSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQAC 96
Query: 84 ADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
++ ++K T IQ++ IPP LEG D++G A+TGSGKT AF +P + +++
Sbjct: 97 KNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWH 145
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 122 (48.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+K + +G T IQ + IP +L G+D +G+AKTGSGKT AF +P +E
Sbjct: 19 VKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILE 67
Score = 41 (19.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 124 VPAVELIYNLKFMPRNGKSW 143
+P+VEL+ N +PR K +
Sbjct: 317 IPSVELVMN-HMLPRTPKEY 335
Score = 34 (17.0 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 152 NGVYLVACNVFKSTQPPTVIKVQTL 176
+ ++ +A + F+ +Q V V+TL
Sbjct: 198 SSIFPIASDCFEWSQDSDVATVETL 222
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 142 (55.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 36/93 (38%), Positives = 54/93 (58%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 143 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGR 201
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ +LK P N
Sbjct: 202 ELLASAPTGSGKTLAFSIP---ILMHLK-QPTN 230
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 142 (55.0 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 41/123 (33%), Positives = 65/123 (52%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 144 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGR 202
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKL----RPLTNGVYLVACNVF 162
+L+ SA TGSGKTLAF +P ++ LK P N K ++ + R L N ++ +
Sbjct: 203 ELLASAPTGSGKTLAFSIP---ILMQLK-QPTN-KGFRALIISPTRELANQIHRELVKIS 257
Query: 163 KST 165
+ T
Sbjct: 258 EGT 260
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 142 (55.0 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 41/123 (33%), Positives = 65/123 (52%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 147 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGR 205
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKL----RPLTNGVYLVACNVF 162
+L+ SA TGSGKTLAF +P ++ LK P N K ++ + R L N ++ +
Sbjct: 206 ELLASAPTGSGKTLAFSIP---ILMQLK-QPTN-KGFRALIISPTRELANQIHRELVKIS 260
Query: 163 KST 165
+ T
Sbjct: 261 EGT 263
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 142 (55.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F+ L+ + LK IA++ FTK T IQ+ +IP L G+D+V A+TGSGKT A+++P
Sbjct: 130 TSFQTLQ--LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIP 187
Query: 126 AVE-LIY 131
+E L+Y
Sbjct: 188 IIERLLY 194
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 142 (55.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F+ L+ + LK IA++ FTK T IQ+ +IP L G+D+V A+TGSGKT A+++P
Sbjct: 130 TSFQTLQ--LSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIP 187
Query: 126 AVE-LIY 131
+E L+Y
Sbjct: 188 IIERLLY 194
>TAIR|locus:2032338 [details] [associations]
symbol:AT1G71280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008266
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC016162
InterPro:IPR025313 Pfam:PF13959 HOGENOM:HOG000268803 KO:K14809
IPI:IPI00539204 PIR:E96737 RefSeq:NP_177284.1 UniGene:At.70351
ProteinModelPortal:Q9FVV4 SMR:Q9FVV4 PRIDE:Q9FVV4
EnsemblPlants:AT1G71280.1 GeneID:843469 KEGG:ath:AT1G71280
GeneFarm:1442 TAIR:At1g71280 InParanoid:Q9FVV4 OMA:NDASIVC
PhylomeDB:Q9FVV4 ArrayExpress:Q9FVV4 Genevestigator:Q9FVV4
Uniprot:Q9FVV4
Length = 465
Score = 140 (54.3 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 67 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 126
+F LK + E+ ++A+ GF T +QA TIP L +D+V A TGSGKTLAFL+P
Sbjct: 16 RFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPF 75
Query: 127 VELI 130
+E+I
Sbjct: 76 IEII 79
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 140 (54.3 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T+F L + LKAI + G+ T IQA IPP LEGRD++G A+TG+GKT +F +P
Sbjct: 2 TKFSELN--LNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLP 59
Query: 126 AVELI 130
+ L+
Sbjct: 60 MITLL 64
>ZFIN|ZDB-GENE-040825-3 [details] [associations]
symbol:ddx56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
56" species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040825-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14810 OMA:TFLMSAT
GeneTree:ENSGT00550000074946 CTD:54606 HOVERGEN:HBG051334
EMBL:CR394525 EMBL:AY648812 IPI:IPI00491475 RefSeq:NP_001003876.1
UniGene:Dr.79779 STRING:Q6DRE7 Ensembl:ENSDART00000034555
GeneID:445399 KEGG:dre:445399 InParanoid:Q6DRE7 NextBio:20832104
Uniprot:Q6DRE7
Length = 557
Score = 141 (54.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+ LKA+AD+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ VP ++ + K
Sbjct: 15 DRLLKALADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLIQRVLTSK 72
>FB|FBgn0034496 [details] [associations]
symbol:CG9143 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14805 GeneTree:ENSGT00550000074847
OMA:DAYLYYI EMBL:BT010296 RefSeq:NP_611467.1 UniGene:Dm.22095
SMR:Q6NQY9 STRING:Q6NQY9 EnsemblMetazoa:FBtr0086304 GeneID:37296
KEGG:dme:Dmel_CG9143 UCSC:CG9143-RA FlyBase:FBgn0034496
InParanoid:Q6NQY9 OrthoDB:EOG4VQ84N GenomeRNAi:37296 NextBio:802980
Uniprot:Q6NQY9
Length = 813
Score = 143 (55.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 49/137 (35%), Positives = 74/137 (54%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
AE +D E D+ A E+ +P S E +S+ + L G V + L+A+ + GF T
Sbjct: 186 AEDSADQQESTDE-EAPEL-VPISTGEAEDMSA--WNGL-G-VPASILRALGEQGFKTPT 239
Query: 93 EIQARTIPPLLEGR-DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPLT 151
+IQA T+P + G+ D++G+A+TGSGKTLAF +P + I LK RN +S K +
Sbjct: 240 QIQALTLPAAIHGKKDILGAAETGSGKTLAFGIPMLAGIMELK--QRNIRSGIRKAPKVK 297
Query: 152 NGVYLVACNVFKSTQPP 168
A + + T PP
Sbjct: 298 GQQPEPAADEHELTPPP 314
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 143 (55.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 28/64 (43%), Positives = 45/64 (70%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ T KA+A+ F T++Q +I P L+G+D++G+A TGSGKTLAFL+P +E ++ K+
Sbjct: 81 KKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWS 140
Query: 137 PRNG 140
+G
Sbjct: 141 RTDG 144
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 67 QFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPA 126
+FE+ C L+AI+D G+ KMT IQ + IP + G+D++ SA+TG+GKT AF +P
Sbjct: 2 RFESFS--FCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPI 59
Query: 127 VE 128
++
Sbjct: 60 LQ 61
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 146 NKHKIHVQGTDLPDPIATFQQLDQ-EYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGR 204
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ LK P N
Sbjct: 205 ELLASAPTGSGKTLAFSIP---ILMQLK-QPTN 233
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 145 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGR 203
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ LK P N
Sbjct: 204 ELLASAPTGSGKTLAFSIP---ILMQLK-QPAN 232
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 139 (54.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+ I MGF + T+IQ + IP + G DL+ S+KTGSGKTLAF++PA++
Sbjct: 13 MSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 139 (54.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+ I MGF + T+IQ + IP + G DL+ S+KTGSGKTLAF++PA++
Sbjct: 13 MSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQ 61
>GENEDB_PFALCIPARUM|PFE0215w [details] [associations]
symbol:PFE0215w "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
Length = 755
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADM-GFTKMT 92
E + D N +++ N + S+ L +F L ++ +N ++ + + G MT
Sbjct: 113 EYNDDVNHNKNNDNNGD----DSESHLNDQGKCKFSDLS-EINKNIVEFLENKKGIKYMT 167
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+IQ+++ P+ EG+D++G ++TGSGKTLAF +P VE +Y +K
Sbjct: 168 KIQSQSFKPIYEGKDIIGRSETGSGKTLAFALPLVEKLYKMK 209
>UNIPROTKB|Q8I457 [details] [associations]
symbol:PFE0215w "ATP-dependent helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0006200 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GO:GO:0020011 KO:K01509 RefSeq:XP_001351602.1
ProteinModelPortal:Q8I457 EnsemblProtists:PFE0215w:mRNA
GeneID:812915 KEGG:pfa:PFE0215w EuPathDB:PlasmoDB:PF3D7_0504400
HOGENOM:HOG000284069 ProtClustDB:CLSZ2431865 Uniprot:Q8I457
Length = 755
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 33/102 (32%), Positives = 60/102 (58%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADM-GFTKMT 92
E + D N +++ N + S+ L +F L ++ +N ++ + + G MT
Sbjct: 113 EYNDDVNHNKNNDNNGD----DSESHLNDQGKCKFSDLS-EINKNIVEFLENKKGIKYMT 167
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
+IQ+++ P+ EG+D++G ++TGSGKTLAF +P VE +Y +K
Sbjct: 168 KIQSQSFKPIYEGKDIIGRSETGSGKTLAFALPLVEKLYKMK 209
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 86 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
MG ++ T +QA IPP+L+GRD +G AKTGSGKT AF++P ++++
Sbjct: 20 MGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVL 64
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L ++ L A+ +GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 142 (55.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 38/92 (41%), Positives = 51/92 (55%)
Query: 41 EDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIP 100
E E + E+ + G V S +FE +G + + I GF K T IQA+ P
Sbjct: 135 ETETFLTSNEITIKGDQVPTP---SIEFE--EGGFPDYVMNEIRKQGFAKPTAIQAQGWP 189
Query: 101 PLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
+ GRDLVG A+TGSGKTLA+++PAV I N
Sbjct: 190 IAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN 221
>UNIPROTKB|G3V0G3 [details] [associations]
symbol:DDX56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 56,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
EMBL:CH471128 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:AC004938
UniGene:Hs.654762 HGNC:HGNC:18193 ProteinModelPortal:G3V0G3
SMR:G3V0G3 Ensembl:ENST00000421223 ArrayExpress:G3V0G3 Bgee:G3V0G3
Uniprot:G3V0G3
Length = 375
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRK 73
>UNIPROTKB|F1NJA0 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 GeneTree:ENSGT00550000074969 IPI:IPI00590534
OMA:CACVEYW EMBL:AADN02034882 Ensembl:ENSGALT00000005224
Uniprot:F1NJA0
Length = 591
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ + +L + L A+ D+GF +MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEAVTEGGWSSLPVPLSPGVLLALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 36/93 (38%), Positives = 53/93 (56%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N ++ + G+D+ I + Q + + K+ L+ I D GF T IQ + IP +L GR
Sbjct: 146 NKHKIHVQGTDLPDPIATFQQLDQ-EYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHGR 204
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P ++ LK P N
Sbjct: 205 ELLASAPTGSGKTLAFSIP---ILMQLK-QPTN 233
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/96 (32%), Positives = 57/96 (59%)
Query: 33 AEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMT 92
++ + + ++D+D + + ++ + + F + G + + L IA G+ + T
Sbjct: 66 SDNEGNNDDDDDDDSKINSYFINNNPTAKKAKAGSFASF-G-LTKFILANIAKKGYKQPT 123
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
IQ +TIP ++EGRD+VG A+TGSGKT AF++P +E
Sbjct: 124 PIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIE 159
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 141 (54.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
LKA+ +GF++ T IQA+ IP L G+D++ SA TGSGKT AFL+P +E
Sbjct: 202 LKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLE 250
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 140 (54.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
L A+ +MGF T IQA IP LLEGRD +G A+TG+GKT AF +P + + ++ P+
Sbjct: 38 LSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQ 96
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 140 (54.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
L A+ +MGF T IQA IP LLEGRD +G A+TG+GKT AF +P + + ++ P+
Sbjct: 38 LSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQ 96
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 138 (53.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 86 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
MG ++ T +QA IPP+L+GRD +G AKTGSGKT AF++P ++++
Sbjct: 23 MGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVL 67
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 133 (51.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/126 (30%), Positives = 66/126 (52%)
Query: 43 EDQTNAVEVQLPGSDVA-LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPP 101
E + + ++L G V+ ++ Q +L G + L IA + + K T IQ + +P
Sbjct: 353 EAEVAELRLELDGIKVSGKDVPKPVQKWSLCG-LTRPILDVIAKLEYDKPTAIQMQALPV 411
Query: 102 LLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQGKLRPLTNGVYLVACNV 161
++ GRD+VG AKTGSGKT+AFL+P I + + + N +G + + +A +
Sbjct: 412 IMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDN----EGPIGLILTPTRELAVQI 467
Query: 162 FKSTQP 167
F+ +P
Sbjct: 468 FRDCKP 473
Score = 34 (17.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 36 DSDANEDEDQTNAVE 50
D D ED+D+ + ++
Sbjct: 245 DVDTKEDDDEVDPLD 259
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 138 (53.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ A+ D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 102 MDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 160
>UNIPROTKB|F1P8J6 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969
EMBL:AAEX03014637 RefSeq:XP_543371.2 Ensembl:ENSCAFT00000011945
GeneID:486246 KEGG:cfa:486246 Uniprot:F1P8J6
Length = 599
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L ++ L A+ +GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPTQLHPQVLGALGQLGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +
Sbjct: 271 DKYDTILVEVSGHDPPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQ 325
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 326 GGRDLMACAQTGSGKTAAFLLP 347
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 33/82 (40%), Positives = 50/82 (60%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + + V++ G D IL+ FE + +C+ IA G+TK+T +Q +IP +
Sbjct: 271 DKYDTILVEVSGHDPPPAILT---FE--EANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQ 325
Query: 104 EGRDLVGSAKTGSGKTLAFLVP 125
GRDL+ A+TGSGKT AFL+P
Sbjct: 326 GGRDLMACAQTGSGKTAAFLLP 347
>FB|FBgn0001565 [details] [associations]
symbol:Hlc "Helicase" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0022008
EMBL:AE014298 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 EMBL:AF017777 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 GeneTree:ENSGT00550000074946 HSSP:P10081
FlyBase:FBgn0001565 EMBL:AY070624 PIR:T08433 RefSeq:NP_523434.2
UniGene:Dm.2805 SMR:Q9VRI0 STRING:Q9VRI0 EnsemblMetazoa:FBtr0077221
GeneID:33118 KEGG:dme:Dmel_CG1666 UCSC:CG1666-RA CTD:33118
InParanoid:Q9VRI0 OMA:THRIGRA GenomeRNAi:33118 NextBio:781998
Uniprot:Q9VRI0
Length = 560
Score = 138 (53.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 65 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLV 124
+ QF L+ + + LKA+A +G+ + T IQ+ IP LLEG+D+V A+TGSGKT + +
Sbjct: 8 TVQFHELE--LDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYAL 65
Query: 125 PAVELIYNLK 134
P ++ I N K
Sbjct: 66 PLIQKILNSK 75
>UNIPROTKB|J3QRN5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 EMBL:AC009994 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000581697 Uniprot:J3QRN5
Length = 65
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ IA FT+ T IQA+ P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 1 MDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 59
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
LKA+ D+GF T IQ IP +LEG +LVG A TG+GKT A+L+P ++ I
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRI 64
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
LKA+ D+GF T IQ IP +LEG +LVG A TG+GKT A+L+P ++ I
Sbjct: 14 LKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRI 64
>MGI|MGI:1915098 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915098 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:AK129402
EMBL:AK033741 EMBL:AK154422 EMBL:BC117786 EMBL:BC117787
IPI:IPI00453808 RefSeq:NP_080685.2 UniGene:Mm.281601
ProteinModelPortal:Q6ZPL9 SMR:Q6ZPL9 IntAct:Q6ZPL9 STRING:Q6ZPL9
PRIDE:Q6ZPL9 Ensembl:ENSMUST00000071057 GeneID:67848 KEGG:mmu:67848
UCSC:uc008zqc.2 InParanoid:Q6ZPL9 NextBio:325707 Bgee:Q6ZPL9
CleanEx:MM_DDX55 Genevestigator:Q6ZPL9
GermOnline:ENSMUSG00000029389 Uniprot:Q6ZPL9
Length = 600
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L+ + L A+ ++GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>DICTYBASE|DDB_G0292992 [details] [associations]
symbol:helA "putative RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292992 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000199 KO:K14808 HSSP:P10081 EMBL:X81822
RefSeq:XP_629281.1 ProteinModelPortal:Q54CD8 STRING:Q54CD8
EnsemblProtists:DDB0215372 GeneID:8629004 KEGG:ddi:DDB_G0292992
OMA:RLPKDGH ProtClustDB:CLSZ2429315 Uniprot:Q54CD8
Length = 1091
Score = 141 (54.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+N LKAI GF T IQ ++IP +L+G D+VG A+TGSGKT AF++P ++
Sbjct: 239 KNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQ 290
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 137 (53.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 66 TQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
T F L G + ++ L+++ MGF + T IQA TIP L+G+D++G A+TG+GKT AF +P
Sbjct: 2 TTFREL-G-LSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLP 59
Query: 126 AVELI 130
++ +
Sbjct: 60 LLDKV 64
>UNIPROTKB|Q3SZ40 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
GeneTree:ENSGT00550000074946 HSSP:P60842 EMBL:BC103169
IPI:IPI00695179 RefSeq:NP_001029501.1 UniGene:Bt.48952
ProteinModelPortal:Q3SZ40 STRING:Q3SZ40 PRIDE:Q3SZ40
Ensembl:ENSBTAT00000014014 GeneID:508728 KEGG:bta:508728 CTD:54606
HOVERGEN:HBG051334 InParanoid:Q3SZ40 OrthoDB:EOG47H5PT
NextBio:20868656 Uniprot:Q3SZ40
Length = 546
Score = 137 (53.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRK 73
>UNIPROTKB|G3V6M5 [details] [associations]
symbol:Ddx56 "Protein Ddx56" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1303195
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:TFLMSAT GeneTree:ENSGT00550000074946 EMBL:CH473963
UniGene:Rn.39458 Ensembl:ENSRNOT00000006642 Uniprot:G3V6M5
Length = 546
Score = 137 (53.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHKK 73
>DICTYBASE|DDB_G0281841 [details] [associations]
symbol:ddx24 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281841 GO:GO:0005524 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_640452.1 ProteinModelPortal:Q54TD7
EnsemblProtists:DDB0234200 GeneID:8623265 KEGG:ddi:DDB_G0281841
KO:K14805 OMA:NIDHVAH Uniprot:Q54TD7
Length = 940
Score = 140 (54.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLE-GRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
LK + +GF+K TEIQ+ IP + G D++G+A+TGSGKTLAF +P V+ I L+ + +
Sbjct: 306 LKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIPMVQRI--LQHLRK 363
Query: 139 NGKSWQGKLRPLTN 152
+G++ + K N
Sbjct: 364 HGQNVENKANKQQN 377
>UNIPROTKB|Q9NY93 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 GO:GO:0003723 EMBL:CH236960 EMBL:CH471128
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
CleanEx:HS_DDX21 CTD:54606 HOVERGEN:HBG051334 OrthoDB:EOG47H5PT
EMBL:AJ131712 EMBL:AF247666 EMBL:AL136700 EMBL:AK022774
EMBL:AK315363 EMBL:CR457213 EMBL:AC004938 EMBL:BC001235
IPI:IPI00302281 IPI:IPI00925037 RefSeq:NP_001244118.1
RefSeq:NP_061955.1 UniGene:Hs.654762 ProteinModelPortal:Q9NY93
SMR:Q9NY93 IntAct:Q9NY93 STRING:Q9NY93 PhosphoSite:Q9NY93
DMDM:20139238 SWISS-2DPAGE:Q9NY93 PaxDb:Q9NY93 PRIDE:Q9NY93
DNASU:54606 Ensembl:ENST00000258772 Ensembl:ENST00000431640
GeneID:54606 KEGG:hsa:54606 UCSC:uc003tlg.3 GeneCards:GC07M044571
HGNC:HGNC:18193 HPA:HPA019749 MIM:608023 neXtProt:NX_Q9NY93
PharmGKB:PA134916346 InParanoid:Q9NY93 PhylomeDB:Q9NY93
GenomeRNAi:54606 NextBio:57133 ArrayExpress:Q9NY93 Bgee:Q9NY93
CleanEx:HS_DDX56 Genevestigator:Q9NY93 GermOnline:ENSG00000136271
Uniprot:Q9NY93
Length = 547
Score = 137 (53.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++L+ + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLLLHRK 73
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVP 125
V + ++ + +GF K T IQ + IP ++ GRDL+G AKTGSGKTLAF++P
Sbjct: 517 VSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILP 567
>SGD|S000004266 [details] [associations]
symbol:DBP9 "DEAD-box protein required for 27S rRNA
processing" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0033680 "ATP-dependent DNA/RNA helicase
activity" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000004266 GO:GO:0005524
GO:GO:0005730 EMBL:BK006945 GO:GO:0003723 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000463
GO:GO:0004004 GO:GO:0033680 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U17245 KO:K14810 HOGENOM:HOG000253015
OMA:TFLMSAT OrthoDB:EOG4DFSWQ EMBL:AY723847 PIR:S51412
RefSeq:NP_013378.1 ProteinModelPortal:Q06218 SMR:Q06218
DIP:DIP-4771N IntAct:Q06218 MINT:MINT-487200 STRING:Q06218
PaxDb:Q06218 PeptideAtlas:Q06218 EnsemblFungi:YLR276C GeneID:850982
KEGG:sce:YLR276C CYGD:YLR276c GeneTree:ENSGT00550000074946
NextBio:967498 Genevestigator:Q06218 GermOnline:YLR276C
Uniprot:Q06218
Length = 594
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 65 STQFEALKGKVCENTLKAIADMGFTKMTEIQARTIP-PLLEGRDLVGSAKTGSGKTLAFL 123
ST FEA + L+AI ++GF T IQ+ IP L + RD++ A TGSGKTLA+L
Sbjct: 16 STTFEAFH--LDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYL 73
Query: 124 VPAVELIYNLKFMPRNGK 141
+P +E I K NG+
Sbjct: 74 IPVIETILEYKKTIDNGE 91
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 122 (48.0 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 88 FTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNL---KFMPR 138
+ + T IQA T P LL GRD+VG A+TGSGKT+AF +PA++ + L K +PR
Sbjct: 185 YKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPR 238
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 150 LTNGVYLVACNVFKSTQPPTVI 171
++ G L A N FKS + P ++
Sbjct: 450 MSQGARLQALNDFKSGKCPVLV 471
>UNIPROTKB|F1MW45 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 IPI:IPI00726158 UniGene:Bt.74315
GeneTree:ENSGT00550000074969 OMA:CACVEYW EMBL:DAAA02045235
Ensembl:ENSBTAT00000009556 Uniprot:F1MW45
Length = 601
Score = 137 (53.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPQVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P VE++
Sbjct: 61 LAFVIPIVEIL 71
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 137 (53.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 70 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 124
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 125 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 164
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 126 (49.4 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 30/59 (50%), Positives = 36/59 (61%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
L+A +G+ K T IQA IP L GRDL SA TGSGKT AF +P +E L F P+
Sbjct: 179 LRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE---RLLFRPK 234
Score = 36 (17.7 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 34 EKDSDANEDEDQTNAVEVQLP 54
E D + EDE + + Q P
Sbjct: 52 EDDDEEEEDEKRKRDADAQSP 72
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 136 (52.9 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 36/97 (37%), Positives = 53/97 (54%)
Query: 37 SDANEDEDQTNAVEVQLPGSDVALEILSST---QFEALKGKVCENTLKAIADMGFTKMTE 93
SDA +ED + + + E +++T +FE K + L I + GF K +
Sbjct: 15 SDATNNEDWRRNLNIPARDNRQQTEDVTNTKGLEFENFGLK--RDLLMGIFEAGFEKPSP 72
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
IQ +IP L GRD++ AK G+GKT AF+VPA+E I
Sbjct: 73 IQEESIPVALTGRDILARAKNGTGKTAAFVVPALETI 109
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 49 VEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDL 108
+E+ + G+++ ++S FE + + + ++ + GFTK T IQ++ P L GRDL
Sbjct: 223 LEITVSGNELPHPVVS---FE--ESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDL 277
Query: 109 VGSAKTGSGKTLAFLVPAVELIYN 132
VG A+TGSGKTLA+++PA+ I N
Sbjct: 278 VGIAQTGSGKTLAYMLPAIVHIGN 301
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 138 (53.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 36/109 (33%), Positives = 60/109 (55%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
+K A E++++ ++Q + A E ++S F + + ++AI +G+ T
Sbjct: 127 KKKKKAGEEDEEDEGEKMQFADTVEANEQITS--FYQMN--LSRPLMRAIGVLGYIYPTP 182
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKS 142
IQA TIP L GRD+ G A TG+GKT A+++P +E L + P N K+
Sbjct: 183 IQASTIPVALLGRDICGCAATGTGKTAAYMLPTLE---RLLYRPLNNKA 228
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 136 (52.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
L+AI D+G+ T IQA TIP L+ G D+VG A+TG+GKT AF +P + I
Sbjct: 25 LRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKI 75
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 137 (53.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E + E+ + G + +L+ +EA N + IA FT+ T IQA+
Sbjct: 127 AQEVETYRRSKEITVRGHNCPKPVLNF--YEA---NFPANVMDVIARQNFTEPTAIQAQG 181
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 182 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 221
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 135 (52.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 35/96 (36%), Positives = 51/96 (53%)
Query: 32 PAEKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKM 91
PA E E+ E+ + G D+ + S V E KA GFT+
Sbjct: 68 PAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDV-GFPDYVLEEVKKA----GFTEP 122
Query: 92 TEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 127
T IQ++ P ++GRDL+G A+TGSGKTL++L+PA+
Sbjct: 123 TPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E ++ EV + G + I++ +EA N ++ I FT+ T IQA+
Sbjct: 58 AQEVEQYRSSKEVTVRGHNCPKPIINF--YEA---NFPANVMEVIQRQNFTEPTAIQAQG 112
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 113 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 152
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 136 (52.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E ++ EV + G + I++ +EA N ++ I FT+ T IQA+
Sbjct: 66 AQEVEQYRSSKEVTVRGHNCPKPIINF--YEA---NFPANVMEVIQRQNFTEPTAIQAQG 120
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
P L G D+VG A+TGSGKTL++L+PA+ I + F+ R
Sbjct: 121 WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLER 160
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 136 (52.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+KA+ G K+ IQ + P +EGRD++G A+TG+GKTLAF +P ++ I +KF ++
Sbjct: 128 VKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI--IKFNAKH 185
Query: 140 GK 141
G+
Sbjct: 186 GR 187
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 136 (52.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+KA++ G K+ IQ + P +EGRD++G A+TG+GKTLAF +P ++ I +K+ ++
Sbjct: 116 VKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI--IKYNAKH 173
Query: 140 GK 141
G+
Sbjct: 174 GR 175
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
+ E + + G T+ T IQ + IP +L G+D++G AKTG+GKTLAF++P +E I
Sbjct: 12 ISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKI 67
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
+ E + + G T+ T IQ + IP +L G+D++G AKTG+GKTLAF++P +E I
Sbjct: 12 ISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKI 67
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 135 (52.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 34 EKDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTE 93
EK+ + E E+ N + S+ + + FE+L G V + A +GF K E
Sbjct: 89 EKEEEEKEIEEFINNTNQKK--SEEEEKKYENVTFESL-G-VHPQIIDACNKLGFNKPKE 144
Query: 94 IQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
IQ +IP L+GRD++G A+TGSGKT AF++P ++
Sbjct: 145 IQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 135 (52.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 34/103 (33%), Positives = 59/103 (57%)
Query: 34 EKDSDANEDEDQTNAVEV-QLPGSD-------VALEILSSTQFEALKGKVCENTLKAIAD 85
E+D ++EDE+++ E + SD ++ + +++ +F L G VC + +
Sbjct: 49 EEDEASDEDEEESEGEEGDEFKSSDDTPKPIQISEDNMTTKKFSQL-G-VCSWITQQLQT 106
Query: 86 MGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
M T +QA IP +LEG D++G A+TG+GKTLAF +P ++
Sbjct: 107 MQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQ 149
>UNIPROTKB|F5H5U2 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:AC055713 EMBL:AC117503
HGNC:HGNC:20085 ChiTaRS:DDX55 IPI:IPI01010332
ProteinModelPortal:F5H5U2 SMR:F5H5U2 Ensembl:ENST00000538744
ArrayExpress:F5H5U2 Bgee:F5H5U2 Uniprot:F5H5U2
Length = 569
Score = 135 (52.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 134 (52.2 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
+KAI MGF + T IQA+TIP L +D++G A+TG+GKT AF +P VE I
Sbjct: 15 MKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKI 65
>UNIPROTKB|Q8NHQ9 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 HSSP:P26196 CTD:57696
HOGENOM:HOG000268803 HOVERGEN:HBG107796 KO:K14809 OrthoDB:EOG4WH8KN
OMA:CACVEYW EMBL:AC055713 EMBL:AC117503 EMBL:BC030020 EMBL:AL833756
EMBL:AB046815 IPI:IPI00185361 RefSeq:NP_065987.1 UniGene:Hs.286173
ProteinModelPortal:Q8NHQ9 SMR:Q8NHQ9 STRING:Q8NHQ9
PhosphoSite:Q8NHQ9 DMDM:296439376 PaxDb:Q8NHQ9 PRIDE:Q8NHQ9
Ensembl:ENST00000238146 GeneID:57696 KEGG:hsa:57696 UCSC:uc001ufi.3
GeneCards:GC12P124086 HGNC:HGNC:20085 neXtProt:NX_Q8NHQ9
PharmGKB:PA134984021 InParanoid:Q8NHQ9 ChiTaRS:DDX55
GenomeRNAi:57696 NextBio:64547 ArrayExpress:Q8NHQ9 Bgee:Q8NHQ9
CleanEx:HS_DDX55 Genevestigator:Q8NHQ9 GermOnline:ENSG00000111364
Uniprot:Q8NHQ9
Length = 600
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>RGD|2324094 [details] [associations]
symbol:Ddx55 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 55"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:2324094
GO:GO:0005524 GO:GO:0003723 EMBL:CH473973 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 CTD:57696 KO:K14809
OrthoDB:EOG4WH8KN GeneTree:ENSGT00550000074969 IPI:IPI00370890
RefSeq:NP_001258255.1 UniGene:Rn.209289 Ensembl:ENSRNOT00000001387
GeneID:100362764 KEGG:rno:100362764 UCSC:RGD:2324094 Uniprot:D3ZX56
Length = 600
Score = 135 (52.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 26/71 (36%), Positives = 46/71 (64%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L+ + L A+ ++GF MT +Q+ TIP + +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLQVPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 134 (52.2 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 37 SDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQA 96
+D E T+ E + + EI T F+ L G V E +A +G+ K T+IQ
Sbjct: 52 ADTEETNTHTHTEETLIEETVTTGEI--HTSFKEL-G-VTEVLCEACDQLGWKKPTKIQI 107
Query: 97 RTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
IP L+GRD++G A+TGSGKT AF VP ++
Sbjct: 108 EAIPVALQGRDVIGLAETGSGKTGAFAVPVLQ 139
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 133 (51.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 74 KVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
K+ + LKA+A G+T+ T +QA +P LE DL+ +A+TG+GKT AF++PA++
Sbjct: 7 KLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 133 (51.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
S+ QF+ L G + LK +A F + TEIQ + IP + GRDL+ S+KTGSGKTLAF+
Sbjct: 3 STLQFKDL-G-LDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFV 60
Query: 124 VPAVELIYNLKFMPRNGKSWQGKL----RPLTNGVY 155
+P + +LK + K +G + R L VY
Sbjct: 61 LPMLHK--SLKTKAFSAKDPRGLILVPTRELAKQVY 94
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 133 (51.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 64 SSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFL 123
S+ QF+ L G + LK +A F + TEIQ + IP + GRDL+ S+KTGSGKTLAF+
Sbjct: 3 STLQFKDL-G-LDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFV 60
Query: 124 VPAVELIYNLKFMPRNGKSWQGKL----RPLTNGVY 155
+P + +LK + K +G + R L VY
Sbjct: 61 LPMLHK--SLKTKAFSAKDPRGLILVPTRELAKQVY 94
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 34 EKDSDANE-DEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADM--GFTK 90
EK +A + E ++ +V + G V ++ ALK N + + D F K
Sbjct: 82 EKKLEAEDLGEGESEQQKVVVTGKGV-----EEAKYAALKTFAESNLPENVLDCCKTFEK 136
Query: 91 MTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 127
+ IQ+ T P LL+GRDL+G AKTGSGKTLAF +PA+
Sbjct: 137 PSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAI 173
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 132 (51.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
++ +A +G+ K T IQ + IP +L+GRDL+ +A+TG+GKT +F++P +E
Sbjct: 13 VQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 132 (51.5 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 22/49 (44%), Positives = 38/49 (77%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
++ +A +G+ K T IQ + IP +L+GRDL+ +A+TG+GKT +F++P +E
Sbjct: 13 VQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + V++ G D +L+ FE + + K I+ G++K+T +Q +IP +
Sbjct: 148 DKYDECAVEMSGLDPPAPLLA---FE--EANFAQTLRKNISKTGYSKLTPVQKHSIPVIQ 202
Query: 104 EGRDLVGSAKTGSGKTLAFLVPAVE 128
GRDL+ A+TGSGKT AFL+P V+
Sbjct: 203 AGRDLMSCAQTGSGKTAAFLLPIVD 227
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 133 (51.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 62 ILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLA 121
I+S Q L G++ + KA G+T T IQ + IP +++GRD+VG A+TG+GKTLA
Sbjct: 5 IMSDFQSLGLTGRILTSLTKA----GYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLA 60
Query: 122 FLVPAVE-LIYNLKFMPRNG 140
F P ++ L N P G
Sbjct: 61 FAAPILDRLSRNASPAPVRG 80
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 133 (51.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 35/96 (36%), Positives = 55/96 (57%)
Query: 36 DSDANEDEDQTNAV-EVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEI 94
DS+A + +A E Q G + A + F+ L G + + +A +MG+ T I
Sbjct: 19 DSEAESVSSRGSAKDETQTSGEEPA----PAKSFKEL-G-IIDQLCEACENMGYKAPTPI 72
Query: 95 QARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
Q++ IP LEGRD++G A+TGSGKT AF +P ++ +
Sbjct: 73 QSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQAL 108
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 138 (53.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 40/98 (40%), Positives = 53/98 (54%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D + + V++ G D I S Q L KV LK + K T IQA+TIP ++
Sbjct: 490 DFRSELGVKITGKDCPKPIQSWAQ-AGLTEKV-HLLLKKFQ---YEKPTSIQAQTIPAIM 544
Query: 104 EGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMPRNG 140
GRDL+G A+TGSGKTLAFL+P ++ K P G
Sbjct: 545 NGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEG 582
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 124 (48.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ + T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 140 GKSWQG 145
+S QG
Sbjct: 463 EESDQG 468
Score = 36 (17.7 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 33 AEKDSDANEDED 44
+ KD D+ +DED
Sbjct: 118 SRKDRDSKKDED 129
Score = 35 (17.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 34 EKDSDANEDED 44
E++++ NEDE+
Sbjct: 222 ERETNGNEDEE 232
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 134 (52.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 44 DQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLL 103
D+ + V++ G D +L+ FE + + K I+ G++K+T +Q +IP +
Sbjct: 148 DKYDECAVEMSGLDPPAPLLA---FE--EANFAQTLRKNISKTGYSKLTPVQKHSIPVIQ 202
Query: 104 EGRDLVGSAKTGSGKTLAFLVPAVE 128
GRDL+ A+TGSGKT AFL+P V+
Sbjct: 203 AGRDLMSCAQTGSGKTAAFLLPIVD 227
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 133 (51.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 42 DEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPP 101
D DQ + + + + S+T FE L G + E ++ ++G K T +Q +P
Sbjct: 34 DSDQNTPQFEKFTNPNPSSDTTSATNFEGL-G-LAEWAVETCKELGMRKPTPVQTHCVPK 91
Query: 102 LLEGRDLVGSAKTGSGKTLAFLVP 125
+L GRD++G A+TGSGKT AF +P
Sbjct: 92 ILAGRDVLGLAQTGSGKTAAFALP 115
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 134 (52.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 72 KGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY 131
+G + + + I+ +G+ + T +Q +IP L+ RD+VG A+TGSGKTLAFL+P + I
Sbjct: 172 EGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYIL 231
Query: 132 NL 133
++
Sbjct: 232 SI 233
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 134 (52.2 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 72 KGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY 131
+G + + + I+ +G+ + T +Q +IP L+ RD+VG A+TGSGKTLAFL+P + I
Sbjct: 172 EGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYIL 231
Query: 132 NL 133
++
Sbjct: 232 SI 233
>TAIR|locus:2153564 [details] [associations]
symbol:AT5G05450 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AB010692 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268803 KO:K14809 EMBL:AJ010469 IPI:IPI00516547
PIR:T51344 RefSeq:NP_196164.1 UniGene:At.23004
ProteinModelPortal:Q9FLB0 SMR:Q9FLB0 PaxDb:Q9FLB0 PRIDE:Q9FLB0
EnsemblPlants:AT5G05450.1 GeneID:830428 KEGG:ath:AT5G05450
GeneFarm:935 TAIR:At5g05450 InParanoid:Q9FLB0 OMA:MDSSANI
PhylomeDB:Q9FLB0 ProtClustDB:CLSN2679231 Genevestigator:Q9FLB0
GermOnline:AT5G05450 Uniprot:Q9FLB0
Length = 593
Score = 134 (52.2 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 38/107 (35%), Positives = 55/107 (51%)
Query: 63 LSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
L+ T+F L+ + + ++A+ F T +QA TIP L +D+ A TGSGKTLAF
Sbjct: 11 LTETRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAF 70
Query: 123 LVPAVELIYNLKFMPRNGKSWQGKL----RPLTNGVYLVACNVFKST 165
+VP VE++ P G + R L+ +Y VA F ST
Sbjct: 71 VVPLVEILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVA-QPFVST 116
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 134 (52.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 78 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP 137
N + IA FT+ T IQA+ P L G D+VG A+TGSGKTL++L+PA+ I + F+
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 138 R 138
R
Sbjct: 164 R 164
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 134 (52.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 78 NTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMP 137
N + IA FT+ T IQA+ P L G D+VG A+TGSGKTL++L+PA+ I + F+
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 138 R 138
R
Sbjct: 164 R 164
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 132 (51.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ L+++ MG T IQ + +P L G+DL+ S+KTGSGKTLAFL+PA++ + + + +
Sbjct: 10 QRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRAL 69
Query: 137 PR 138
+
Sbjct: 70 SK 71
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 132 (51.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFM 136
+ L+++ MG T IQ + +P L G+DL+ S+KTGSGKTLAFL+PA++ + + + +
Sbjct: 10 QRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQRVISTRAL 69
Query: 137 PR 138
+
Sbjct: 70 SK 71
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 134 (52.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 77 ENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
EN L+A+ ++G+ K T IQ+ +I PL+ G+D++G A+TG+GKT AF +P + +
Sbjct: 15 ENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNKV 68
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 134 (52.2 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
L+A+ D+G+ K + IQA IP LL GRD++G A+TGSGKT AF +P ++
Sbjct: 18 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 132 (51.5 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
L+A+A+ G+ + T IQ + IP +LEGRDL+ SA+TG+GKT F +P ++
Sbjct: 13 LRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 124 (48.7 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ + T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 140 GKSWQG 145
+S QG
Sbjct: 463 EESDQG 468
Score = 35 (17.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 34 EKDSDANEDED 44
E++++ NEDE+
Sbjct: 222 ERETNGNEDEE 232
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 124 (48.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ + T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 402 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 461
Query: 140 GKSWQG 145
+S QG
Sbjct: 462 EESDQG 467
Score = 35 (17.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 34 EKDSDANEDED 44
E++++ NEDE+
Sbjct: 221 ERETNGNEDEE 231
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 124 (48.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ + T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 140 GKSWQG 145
+S QG
Sbjct: 463 EESDQG 468
Score = 35 (17.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 34 EKDSDANEDED 44
E++++ NEDE+
Sbjct: 222 ERETNGNEDEE 232
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 124 (48.7 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ + T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462
Query: 140 GKSWQG 145
+S QG
Sbjct: 463 EESDQG 468
Score = 35 (17.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 5/11 (45%), Positives = 10/11 (90%)
Query: 34 EKDSDANEDED 44
E++++ NEDE+
Sbjct: 222 ERETNGNEDEE 232
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 132 (51.5 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 81 KAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
KAI MGF + T IQA+TIP L +D++G A+TG+GKT AF +P VE I
Sbjct: 16 KAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEKI 65
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 123 (48.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIY 131
LKAI+ MGF + T IQ +P L G+D+ A TG+GKT AF++P +E LIY
Sbjct: 213 LKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVLERLIY 265
Score = 35 (17.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 6/14 (42%), Positives = 10/14 (71%)
Query: 32 PAEKDSDANEDEDQ 45
P E DS ++++ DQ
Sbjct: 14 PEEPDSGSDDEADQ 27
>UNIPROTKB|F1RFL5 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
CTD:57696 KO:K14809 GeneTree:ENSGT00550000074969 OMA:CACVEYW
EMBL:CU468658 RefSeq:XP_001927747.2 UniGene:Ssc.4554
UniGene:Ssc.95961 Ensembl:ENSSSCT00000010713 GeneID:100157342
KEGG:ssc:100157342 Uniprot:F1RFL5
Length = 600
Score = 133 (51.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPRVLDVLQELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P +E++
Sbjct: 61 LAFVIPILEIL 71
>TAIR|locus:2116920 [details] [associations]
symbol:AT4G34910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003723 EMBL:AL161586
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AL079347
KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT EMBL:BT002816
EMBL:BT004442 EMBL:AJ010467 IPI:IPI00520936 PIR:T10237 PIR:T51745
RefSeq:NP_195217.1 UniGene:At.24924 ProteinModelPortal:Q9SW44
SMR:Q9SW44 STRING:Q9SW44 PaxDb:Q9SW44 PRIDE:Q9SW44
EnsemblPlants:AT4G34910.1 GeneID:829643 KEGG:ath:AT4G34910
KEGG:dosa:Os03t0728800-01 GeneFarm:933 TAIR:At4g34910
InParanoid:Q9SW44 PhylomeDB:Q9SW44 ProtClustDB:CLSN2685920
Genevestigator:Q9SW44 GermOnline:AT4G34910 Uniprot:Q9SW44
Length = 626
Score = 133 (51.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 36/94 (38%), Positives = 54/94 (57%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A E E+Q N E + + E + FE L G + ++A+ G K T IQ
Sbjct: 23 AEEVEEQRNDREQE----EEQKEEEAPKSFEEL-G-LDSRLIRALTKKGIEKPTLIQQSA 76
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYN 132
IP +LEG+D+V AKTGSGKTLA+L+P ++ +++
Sbjct: 77 IPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFS 110
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 121 (47.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 29/59 (49%), Positives = 36/59 (61%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMP 137
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 230 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQAP 288
Score = 37 (18.1 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 32 PAEKDSDANEDEDQ 45
P E +SD+ ++E++
Sbjct: 49 PVEPESDSGDEEEE 62
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 132 (51.5 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 75 VCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+ EN LKA+ + G+T T IQ IP +L G D+ G A+TG+GKT AF++P ++
Sbjct: 11 LAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 134 (52.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
+K I G+ T IQ +TIP +LEGRD+V AKTGSGKT FL+P E
Sbjct: 51 IKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFE 99
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 121 (47.7 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 29/59 (49%), Positives = 36/59 (61%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIYNLKFMP 137
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY + P
Sbjct: 199 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIYKPRQSP 257
Score = 36 (17.7 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 35 KDSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGF 88
KD + EDED E +D IL+ + LK K + K GF
Sbjct: 129 KDEEGPEDEDS----ETDYSSADE--NILTKAATDTLKVKERKKKKKGQETGGF 176
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 132 (51.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N + + G+D+ I + Q + + K+ ++ I GF T IQ + IP +L GR
Sbjct: 139 NQHRINVQGTDLPDPIATFDQLQK-EYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGR 197
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P L+ +LK P N
Sbjct: 198 ELLASAPTGSGKTLAFCIP---LLTHLK-QPMN 226
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 132 (51.5 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 47 NAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGR 106
N + + G+D+ I + Q + + K+ ++ I GF T IQ + IP +L GR
Sbjct: 139 NQHRINVQGTDLPDPIATFDQLQK-EYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGR 197
Query: 107 DLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
+L+ SA TGSGKTLAF +P L+ +LK P N
Sbjct: 198 ELLASAPTGSGKTLAFCIP---LLTHLK-QPMN 226
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 135 (52.6 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ + GF T IQA+T P L+ RD+V AKTGSGKTL +L+PA L+ + + RN
Sbjct: 447 LRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRN 506
Query: 140 G 140
G
Sbjct: 507 G 507
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 130 (50.8 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 34/92 (36%), Positives = 54/92 (58%)
Query: 39 ANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQART 98
A+ + D ++E P A+E+ + F+ L G V + +A +G+TK T+IQ
Sbjct: 3 ASVEHDSLESMEA--P--QTAVEVEETKTFKDL-G-VTDVLCEACDQLGWTKPTKIQIEA 56
Query: 99 IPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
IP L+GRD++G A+TGSGKT AF +P + +
Sbjct: 57 IPLALQGRDIIGLAETGSGKTGAFALPILNAL 88
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 121 (47.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRN 139
L+ I G+ T IQ + IP L+ RD++G A+TGSGKT AFL+P + I L + R
Sbjct: 390 LEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 449
Query: 140 GKSWQG 145
S QG
Sbjct: 450 EDSDQG 455
Score = 36 (17.7 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 4/16 (25%), Positives = 12/16 (75%)
Query: 34 EKDSDANEDEDQTNAV 49
E++++ N+D+D+ +
Sbjct: 209 ERENNGNDDDDERQKI 224
>MGI|MGI:1277172 [details] [associations]
symbol:Ddx56 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 56"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1277172 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT
GeneTree:ENSGT00550000074946 CTD:54606 HOVERGEN:HBG051334
OrthoDB:EOG47H5PT EMBL:AK011136 EMBL:AK077514 EMBL:BC018291
IPI:IPI00132957 RefSeq:NP_080814.1 UniGene:Mm.29810
ProteinModelPortal:Q9D0R4 SMR:Q9D0R4 STRING:Q9D0R4
PhosphoSite:Q9D0R4 PaxDb:Q9D0R4 PRIDE:Q9D0R4
Ensembl:ENSMUST00000004507 GeneID:52513 KEGG:mmu:52513
InParanoid:Q9D0R4 ChiTaRS:DDX56 NextBio:309069 Bgee:Q9D0R4
CleanEx:MM_DDX56 Genevestigator:Q9D0R4
GermOnline:ENSMUSG00000004393 Uniprot:Q9D0R4
Length = 546
Score = 131 (51.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/55 (43%), Positives = 40/55 (72%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLK 134
L+A+ D+G+++ T IQ + IP LEG+DL+ A+TGSGKT A+ +P ++ + + K
Sbjct: 19 LQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQSLLHKK 73
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 162
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 162
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 162
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 162
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 162
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 36 DSDANEDEDQTNAVEVQLPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQ 95
DS N D+ + VEV A+E + F V EN ++ G++K T +Q
Sbjct: 114 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPA---VMENVNRS----GYSKPTPVQ 166
Query: 96 ARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELI 130
+IP LL RDL+ A+TGSGKT AFL+P ++ I
Sbjct: 167 KHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHI 201
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 72 KGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY 131
+ + + LKAI + K T IQ + IP LE RDL+G A+TGSGKT AF++P + +
Sbjct: 702 ESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVK 761
Query: 132 NL 133
L
Sbjct: 762 QL 763
Score = 36 (17.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 36 DSDANEDEDQTN 47
D+D N+D D N
Sbjct: 67 DNDNNDDNDDDN 78
Score = 36 (17.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 34 EKDSDANEDEDQTNAVE 50
+KD+ ED+ +N ++
Sbjct: 135 KKDNQTQEDDTSSNKIQ 151
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 72 KGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIY 131
+ + + LKAI + K T IQ + IP LE RDL+G A+TGSGKT AF++P + +
Sbjct: 702 ESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVK 761
Query: 132 NL 133
L
Sbjct: 762 QL 763
Score = 36 (17.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 36 DSDANEDEDQTN 47
D+D N+D D N
Sbjct: 67 DNDNNDDNDDDN 78
Score = 36 (17.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 34 EKDSDANEDEDQTNAVE 50
+KD+ ED+ +N ++
Sbjct: 135 KKDNQTQEDDTSSNKIQ 151
>UNIPROTKB|J3QR62 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 EMBL:AC009994 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000581806 Uniprot:J3QR62
Length = 52
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAV 127
+ IA FT+ T IQA+ P L G D+VG A+TGSGKTL++L+PA+
Sbjct: 1 MDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 48
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 134 (52.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 37/96 (38%), Positives = 50/96 (52%)
Query: 43 EDQTNAVEVQLPGSDV--ALEILSSTQFEALKGK--------VCENTLKAIADMGFTKMT 92
+D+ NA G D E S+ E K K + + L I GF + T
Sbjct: 102 DDENNASGKTQTGDDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPT 161
Query: 93 EIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE 128
IQ +TIP +L+ RD+VG A+TGSGKT AF++P VE
Sbjct: 162 PIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 119 (46.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/53 (52%), Positives = 34/53 (64%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVE-LIY 131
LKAI MGF + T IQ IP L G+D+ A TG+GKT AF +P +E LIY
Sbjct: 196 LKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERLIY 248
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 32 PAEKDSDANEDEDQ 45
P E +SD+ ++E++
Sbjct: 18 PVEPESDSGDEEEE 31
>UNIPROTKB|Q2NL08 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 EMBL:BC111255 IPI:IPI00726158
RefSeq:NP_001039472.1 UniGene:Bt.74315 PRIDE:Q2NL08 GeneID:508581
KEGG:bta:508581 CTD:57696 HOGENOM:HOG000268803 HOVERGEN:HBG107796
InParanoid:Q2NL08 KO:K14809 OrthoDB:EOG4WH8KN NextBio:20868584
Uniprot:Q2NL08
Length = 601
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 60 LEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKT 119
+E ++ +E+L + L + ++GF MT +Q+ TIP ++ +D+ A TGSGKT
Sbjct: 1 MEHVTEGSWESLPVPLHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT 60
Query: 120 LAFLVPAVELI 130
LAF++P E++
Sbjct: 61 LAFVIPIEEIL 71
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 241
>ASPGD|ASPL0000000390 [details] [associations]
symbol:AN6374 species:162425 "Emericella nidulans"
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0033680 "ATP-dependent DNA/RNA
helicase activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000107 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14810
RefSeq:XP_663978.1 ProteinModelPortal:Q5AZA6 STRING:Q5AZA6
EnsemblFungi:CADANIAT00006610 GeneID:2871271 KEGG:ani:AN6374.2
HOGENOM:HOG000253015 OMA:TFLMSAT OrthoDB:EOG4DFSWQ Uniprot:Q5AZA6
Length = 610
Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 38 DANEDEDQTNAVEVQ-LPGSDVALEILSSTQFEALKGKVCENTLKAIADMGFTKMTEIQA 96
DAN D T A E + + G+D FE L + +A+ F+K T +QA
Sbjct: 6 DAN-DVPSTEANEAEEVKGAD------RDEDFETLN--LDPRLRQALVKEKFSKPTPVQA 56
Query: 97 RTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPRNGKSWQG 145
+ IP LEG+D++ AKTGSGKT A+++P ++ I K + + K+ G
Sbjct: 57 KAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKAIDPSMKATTG 105
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 183 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 241
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 243
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 80 LKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAFLVPAVELIYNLKFMPR 138
+ + D FT+ T IQ + P L GRD+VG A+TGSGKTLA+L+PA+ I + ++ R
Sbjct: 185 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER 243
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 68 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
F LK K L+ ++ MG+ +MT IQA+++P +L G D++G KTGSGKT AF
Sbjct: 3 FSTLKLKT--ELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAF 55
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 129 (50.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 68 FEALKGKVCENTLKAIADMGFTKMTEIQARTIPPLLEGRDLVGSAKTGSGKTLAF 122
F LK K L+ ++ MG+ +MT IQA+++P +L G D++G KTGSGKT AF
Sbjct: 3 FSTLKLKT--ELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAF 55
>ASPGD|ASPL0000054998 [details] [associations]
symbol:AN0894 species:162425 "Emericella nidulans"
[GO:0000373 "Group II intron splicing" evidence=IEA] [GO:0034337
"RNA folding" evidence=IEA] [GO:0000372 "Group I intron splicing"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EnsemblFungi:CADANIAT00001763
HOGENOM:HOG000204197 OMA:DDEVPTH Uniprot:C8VUS9
Length = 641
Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 39/104 (37%), Positives = 59/104 (56%)
Query: 45 QTNAVEVQLPGSDVALEILSSTQFEAL--KGKVCENTLKAIAD-MGFTKMTEIQARTIPP 101
Q NAV + +V++E L T+F L + + N ++ + M MTE+Q RTI
Sbjct: 58 QVNAV-AENSSQNVSVEELP-TRFAELGERNILPRNLVENLTKHMKLETMTEVQRRTILE 115
Query: 102 LLEGRDLVGSAKTGSGKTLAFLVPAVELIYN----LKFMPRNGK 141
++G D++ AKTG+GKT+AFL+P VE + LK RNG+
Sbjct: 116 SVKGGDMLAQAKTGTGKTVAFLIPVVEKLLGDRSLLKTSYRNGR 159
WARNING: HSPs involving 364 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.370 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 178 158 0.00085 106 3 11 23 0.40 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 614
No. of states in DFA: 581 (62 KB)
Total size of DFA: 133 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.35u 0.08s 15.43t Elapsed: 00:00:04
Total cpu time: 15.38u 0.08s 15.46t Elapsed: 00:00:04
Start: Thu Aug 15 11:48:33 2013 End: Thu Aug 15 11:48:37 2013
WARNINGS ISSUED: 2