Query psy12986
Match_columns 230
No_of_seqs 135 out of 1637
Neff 9.6
Searched_HMMs 13730
Date Fri Aug 16 16:12:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12986.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12986hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 1.7E-30 1.3E-34 231.4 15.1 172 38-218 248-420 (643)
2 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 2.8E-28 2E-32 216.8 15.8 171 39-218 236-407 (640)
3 d1v25a_ e.23.1.1 (A:) Long cha 99.9 9.8E-23 7.1E-27 176.7 14.2 164 37-219 164-329 (534)
4 d1lcia_ e.23.1.1 (A:) Lucifera 99.9 3.2E-22 2.4E-26 173.2 16.3 164 39-220 184-350 (541)
5 d1mdba_ e.23.1.1 (A:) Dihydrox 99.8 1.1E-20 8.3E-25 163.0 16.0 163 38-218 178-341 (536)
6 d1amua_ e.23.1.1 (A:) Phenylal 99.8 1.2E-20 8.4E-25 162.5 15.0 158 37-218 161-318 (514)
7 d3cw9a1 e.23.1.1 (A:1-503) 4-c 99.8 4.2E-19 3.1E-23 151.2 16.0 165 38-218 149-315 (503)
8 d1lcia_ e.23.1.1 (A:) Lucifera 87.8 2.4 0.00017 34.0 10.8 95 47-150 37-134 (541)
9 d3cw9a1 e.23.1.1 (A:1-503) 4-c 85.3 4.1 0.0003 31.9 10.8 90 41-142 16-108 (503)
10 d1amua_ e.23.1.1 (A:) Phenylal 79.4 13 0.00091 29.3 12.3 97 40-150 36-135 (514)
11 d1pg4a_ e.23.1.1 (A:) Acetyl-C 76.7 15 0.0011 30.3 11.8 94 41-142 86-182 (643)
12 d1mdba_ e.23.1.1 (A:) Dihydrox 75.9 14 0.001 29.0 11.1 77 61-142 50-129 (536)
13 d1v25a_ e.23.1.1 (A:) Long cha 75.7 17 0.0012 28.8 13.0 99 40-148 24-125 (534)
14 d1ry2a_ e.23.1.1 (A:) Acetyl-C 66.2 31 0.0023 28.0 11.8 96 40-143 72-171 (640)
15 d3bula2 c.23.6.1 (A:741-896) M 59.0 21 0.0015 23.6 9.1 55 85-142 9-64 (156)
16 d1ccwa_ c.23.6.1 (A:) Glutamat 51.0 27 0.002 22.5 9.0 55 85-142 6-61 (137)
17 d1xrsb1 c.23.6.1 (B:102-261) D 42.8 19 0.0014 24.0 4.9 54 85-142 22-86 (160)
18 d2ewca1 d.79.1.1 (A:3-122) Hyp 26.9 17 0.0012 22.9 2.2 40 48-87 23-63 (120)
19 d1q44a_ c.37.1.5 (A:) Putative 26.8 63 0.0046 23.7 6.0 51 58-110 37-87 (320)
20 d2trcp_ c.47.1.6 (P:) Phosduci 20.4 5.9 0.00043 28.1 -1.3 17 50-67 3-19 (217)
No 1
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=99.97 E-value=1.7e-30 Score=231.41 Aligned_cols=172 Identities=12% Similarity=0.045 Sum_probs=145.4
Q ss_pred CCCCCceEEEEEccCCCCCceeeeccHHHHHHHH-HHHHHHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeC
Q psy12986 38 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLC-RSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 116 (230)
Q Consensus 38 ~~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~-~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~ 116 (230)
...++|+++|+|||||||.||||+++|++++... ......+++.++|++++.+|++|+.|+...++.+++.|+++++++
T Consensus 248 ~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~vl~~ 327 (643)
T d1pg4a_ 248 AMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFE 327 (643)
T ss_dssp CEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEEC
T ss_pred CCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEec
Confidence 3467899999999999999999999999976554 445556789999999999999999998776788999999999987
Q ss_pred CchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhhC
Q psy12986 117 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 196 (230)
Q Consensus 117 ~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~~ 196 (230)
......+|..+++.|+++++|+++.+|++++.+++.... ..+..++++||.+++||+ |+++++++++.+.|+..
T Consensus 328 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~-----~~~~~dl~sLr~i~~~G~-pl~~~~~~~~~~~~g~~ 401 (643)
T d1pg4a_ 328 GVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDK-----AIEGTDRSSLRILGSVGE-PINPEAWEWYWKKIGKE 401 (643)
T ss_dssp SCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGG-----GTTTCCCTTCCEEEEESS-CCCHHHHHHHHHHTTTT
T ss_pred CCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcch-----hccccCCCceEEEEEEeC-CCCHHHHHHHHHHhCCC
Confidence 655456789999999999999999999999988765322 345678999999999998 89999999999998543
Q ss_pred CCCccccccccCCCcceeEEee
Q psy12986 197 GLSPRAVSTSFGCRVNIAICLQ 218 (230)
Q Consensus 197 gl~~~~~~~~YG~te~~~~~~~ 218 (230)
+ ..+.+.||+||++..++.
T Consensus 402 ~---~~i~~~yG~TE~g~~~~~ 420 (643)
T d1pg4a_ 402 K---CPVVDTWWQTETGGFMIT 420 (643)
T ss_dssp C---SCEEEEBCCGGGSSCSBC
T ss_pred C---ceEEEeechhhccceEEe
Confidence 3 458999999999876554
No 2
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=2.8e-28 Score=216.79 Aligned_cols=171 Identities=12% Similarity=0.064 Sum_probs=144.9
Q ss_pred CCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHH-HHHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeCC
Q psy12986 39 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSM-KLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 117 (230)
Q Consensus 39 ~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~-~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~ 117 (230)
..++|+++|+|||||||.||||+++|++++.+.... ...+++.++|++++.+|++|+.|+...++.+++.|+++++++.
T Consensus 236 ~~~~d~a~i~~TSGTTG~PKgV~~~h~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~ 315 (640)
T d1ry2a_ 236 VDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEG 315 (640)
T ss_dssp EETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECS
T ss_pred cccccCCEEEECCCCCCCCcceeeccccHHHHHHHHHHhhcCCCcccceeeccchhhhhhHHHHHHHHHHhCCEEEEecC
Confidence 457899999999999999999999999988765444 4467889999999999999999987768889999999999887
Q ss_pred chhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhhCC
Q psy12986 118 SEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSALG 197 (230)
Q Consensus 118 ~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~~g 197 (230)
.....++..|++.|+++++|+++.+|++++.+.+.... .....++++||.+++||+ |+++++.++|.+.|+..
T Consensus 316 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-----~~~~~~l~sLr~v~~gG~-~l~~~~~~~~~~~~g~~- 388 (640)
T d1ry2a_ 316 TPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDS-----YIENHSLKSLRCLGSVGE-PIAAEVWEWYSEKIGKN- 388 (640)
T ss_dssp CTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTT-----SSSSCCCTTCCEEEECSS-CCCHHHHHHHHHTTSCS-
T ss_pred CCCCCCHHHHHHHHHHhCccEEEcChHHHHHHHhcccc-----ccccCCCCceEEEEEecc-cCcHHHHHHHHHhcCCC-
Confidence 76666889999999999999999999999987654322 334678999999999998 89999999999988543
Q ss_pred CCccccccccCCCcceeEEee
Q psy12986 198 LSPRAVSTSFGCRVNIAICLQ 218 (230)
Q Consensus 198 l~~~~~~~~YG~te~~~~~~~ 218 (230)
...+.+.||+||++..+..
T Consensus 389 --~~~i~~~yg~te~~~~~~~ 407 (640)
T d1ry2a_ 389 --EIPIVDTYWQTESGSHLVT 407 (640)
T ss_dssp --SSCEEECBCCTTTCSCSEE
T ss_pred --cceEEeeeccccccccccc
Confidence 3458999999999876543
No 3
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=99.88 E-value=9.8e-23 Score=176.66 Aligned_cols=164 Identities=17% Similarity=0.171 Sum_probs=132.7
Q ss_pred CCCCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH--HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEE
Q psy12986 37 RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK--LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSIL 114 (230)
Q Consensus 37 ~~~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~ 114 (230)
....++++++|+|||||||.||||+++|++++....... ....+..+++++.++|++|..++.. .+..+..|+++++
T Consensus 164 ~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~-~~~~~~~g~~~v~ 242 (534)
T d1v25a_ 164 VRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAWCL-PYAATLVGAKQVL 242 (534)
T ss_dssp CCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHHTH-HHHHHHHTCEEEE
T ss_pred cccccCCcEEEEEecCCCCCccccccccchhhhhhhhhhhhcccccccccccccccchhhhccccc-cceeeeecceeee
Confidence 345678999999999999999999999999987654433 3455678899999999999988776 6667777777777
Q ss_pred eCCchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhh
Q psy12986 115 IPPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFS 194 (230)
Q Consensus 115 ~~~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~ 194 (230)
..+. .++..+++.+.++++|++..+|.+++.++... .....++++||.+++||+ ++++++.+++.+.
T Consensus 243 ~~~~---~~~~~~~~~~~~~~vt~~~~~p~~~~~~~~~~-------~~~~~~~~~lr~~~~gG~-~~~~~~~~~~~~~-- 309 (534)
T d1v25a_ 243 PGPR---LDPASLVELFDGEGVTFTAGVPTVWLALADYL-------ESTGHRLKTLRRLVVGGS-AAPRSLIARFERM-- 309 (534)
T ss_dssp CTTC---CSHHHHHHHHHHTTCCEEEECHHHHHHHHHHH-------HHHTCCCSSCCEEEECSS-CCCHHHHHHHHHT--
T ss_pred cccc---ccccccchhhhhccccccccCchhhhhhhhhh-------ccccccccceeEEEEecC-CCCHHHHHHHHHh--
Confidence 6543 36888999999999999999999998876543 334568899999999998 7999999988764
Q ss_pred hCCCCccccccccCCCcceeEEeec
Q psy12986 195 ALGLSPRAVSTSFGCRVNIAICLQL 219 (230)
Q Consensus 195 ~~gl~~~~~~~~YG~te~~~~~~~~ 219 (230)
+ ..+.+.||+||++.++...
T Consensus 310 --~---~~i~~~yG~te~~~~~~~~ 329 (534)
T d1v25a_ 310 --G---VEVRQGYGLTETSPVVVQN 329 (534)
T ss_dssp --T---CEEEEEEECGGGSSEEEEC
T ss_pred --C---Ceeeeeccccccccceeec
Confidence 2 3489999999998877654
No 4
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=99.88 E-value=3.2e-22 Score=173.17 Aligned_cols=164 Identities=14% Similarity=0.213 Sum_probs=126.9
Q ss_pred CCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHHHH---cccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEe
Q psy12986 39 PTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLA---CELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI 115 (230)
Q Consensus 39 ~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~~~---~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~ 115 (230)
..++++++|+|||||||.||||+++|++++......... ....++++++.++|++|..++.. .+..+..++..+..
T Consensus 184 ~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~ 262 (541)
T d1lcia_ 184 DRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFT-TLGYLICGFRVVLM 262 (541)
T ss_dssp CTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHH-HHHHHHHTCEEEEC
T ss_pred CCCCceEEEEeeccccccccccccccchhhhhhhhhhhhcccccccccccccccccccccccccc-cccccccccccccc
Confidence 346889999999999999999999999998776655443 34567899999999999988776 66677777777766
Q ss_pred CCchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhh
Q psy12986 116 PPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSA 195 (230)
Q Consensus 116 ~~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~ 195 (230)
... ++...+..+.+++++.++.+|.++..++... .....+++++|.+++||+ ++++++.+++.++|+.
T Consensus 263 ~~~----~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~-------~~~~~~~~~l~~v~~gG~-~~~~~~~~~~~~~~~~ 330 (541)
T d1lcia_ 263 YRF----EEELFLRSLQDYKIQSALLVPTLFSFFAKST-------LIDKYDLSNLHEIASGGA-PLSKEVGEAVAKRFHL 330 (541)
T ss_dssp SSC----CHHHHHHHHHHTTCSEEECCHHHHHHHHHCS-------CGGGSCCTTCCEEECTTC-CCCHHHHHHHHHHTTC
T ss_pred ccc----ccchhHHHHhhhhccccccCccccccccccc-------cccccccccceEEEeccc-ccccccccccccccCC
Confidence 543 4677889999999999999999988766543 234557899999999998 7999999999998853
Q ss_pred CCCCccccccccCCCcceeEEeecc
Q psy12986 196 LGLSPRAVSTSFGCRVNIAICLQLT 220 (230)
Q Consensus 196 ~gl~~~~~~~~YG~te~~~~~~~~~ 220 (230)
..+.++||+||++..+....
T Consensus 331 -----~~~~~~YG~TE~~~~~~~~~ 350 (541)
T d1lcia_ 331 -----PGIRQGYGLTETTSAILITP 350 (541)
T ss_dssp -----SCCBCEECCGGGSSCSEECC
T ss_pred -----ceeeecCCccccCceEEecC
Confidence 23688999999977655443
No 5
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=99.84 E-value=1.1e-20 Score=163.03 Aligned_cols=163 Identities=15% Similarity=0.103 Sum_probs=132.2
Q ss_pred CCCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHHHHcccCCCCeEEEecCCcCchhHHHHHHHHhhh-CceeEEeC
Q psy12986 38 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYS-GHHSILIP 116 (230)
Q Consensus 38 ~~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~-G~~~v~~~ 116 (230)
+..++|+++|+|||||||.||||++||+++..++......+++.++|++++..|++|..|+...++..+.. |.+++..+
T Consensus 178 ~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~ 257 (536)
T d1mdba_ 178 EVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSP 257 (536)
T ss_dssp CCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS
T ss_pred ccCccchHHhhhcccccccceecccccccccccccccccccccccccccccccccccccceeeccccccccccccccccC
Confidence 45688999999999999999999999999999999999999999999999999999999876544545544 55555544
Q ss_pred CchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhhC
Q psy12986 117 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 196 (230)
Q Consensus 117 ~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~~ 196 (230)
. .++..+++.+++++++.+..+|..+..+.... ......+++++.+++||+ ++++++.+++.+.++
T Consensus 258 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~gG~-~~~~~~~~~~~~~~~-- 323 (536)
T d1mdba_ 258 S----PSPDDAFPLIEREKVTITALVPPLAMVWMDAA-------SSRRDDLSSLQVLQVGGA-KFSAEAARRVKAVFG-- 323 (536)
T ss_dssp S----SSHHHHHHHHHHHTCSEEEECHHHHHHHHHHH-------HHCCCCCTTCCEEEEESS-CCCHHHHTTHHHHTC--
T ss_pred C----CCHHHHHHHHhhhccccccccchhhhhhhhhc-------cccccccCcceeEEEecc-ccccccccchhhccC--
Confidence 3 36899999999999999999998887765432 234557889999999998 799999999998873
Q ss_pred CCCccccccccCCCcceeEEee
Q psy12986 197 GLSPRAVSTSFGCRVNIAICLQ 218 (230)
Q Consensus 197 gl~~~~~~~~YG~te~~~~~~~ 218 (230)
......|+.+|.+..+..
T Consensus 324 ----~~~~~~~~~~~~~~~~~~ 341 (536)
T d1mdba_ 324 ----CTLQQVFGMAEGLVNYTR 341 (536)
T ss_dssp ----SEEEEEEECTTSCEEECC
T ss_pred ----ceeeeccccccccccccc
Confidence 335677888887665443
No 6
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=99.84 E-value=1.2e-20 Score=162.55 Aligned_cols=158 Identities=10% Similarity=0.068 Sum_probs=128.0
Q ss_pred CCCCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHHHHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeC
Q psy12986 37 RAPTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 116 (230)
Q Consensus 37 ~~~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~ 116 (230)
.+..++|+++|+|||||||.||+|+++|+++..........++...+++.+.++|++|..++.. ++..++.|+.+++..
T Consensus 161 ~p~~~~d~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~-~~~~l~~~~~~~~~~ 239 (514)
T d1amua_ 161 VPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWE-MFMALLTGASLYIIL 239 (514)
T ss_dssp CCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHH-HHHHHTTTCEEEECC
T ss_pred CCCCcccceEEEEccCCCCCcccccccccccccccccccccccccccccccceecccccccccc-ccccccccccccccc
Confidence 3456789999999999999999999999999999999999999999999999999999998876 788888888888876
Q ss_pred CchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhhC
Q psy12986 117 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSAL 196 (230)
Q Consensus 117 ~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~~ 196 (230)
+.. ..+...+++.+..+.++.+..+|..... ....++++++.+++||+ ++++++.+++.+.
T Consensus 240 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~l~~~~~~G~-~~~~~~~~~~~~~---- 300 (514)
T d1amua_ 240 KDT-INDFVKFEQYINQKEITVITLPPTYVVH-------------LDPERILSIQTLITAGS-ATSPSLVNKWKEK---- 300 (514)
T ss_dssp HHH-HTCHHHHHHHHHHTTCCEEEECHHHHTT-------------SCTTTCCSCSEEEEESS-CCCHHHHHHHTTT----
T ss_pred ccc-ccchhhhhhhhhhhhcccccceeeeccc-------------ccccccccccEEEEecc-cCCHHHhhhhccc----
Confidence 544 4567888999999999999888866542 23457889999999998 6999988877653
Q ss_pred CCCccccccccCCCcceeEEee
Q psy12986 197 GLSPRAVSTSFGCRVNIAICLQ 218 (230)
Q Consensus 197 gl~~~~~~~~YG~te~~~~~~~ 218 (230)
..+.+.||+||++.++..
T Consensus 301 ----~~~~~~yG~tE~~~~~~~ 318 (514)
T d1amua_ 301 ----VTYINAYGPTETTICATT 318 (514)
T ss_dssp ----SEEEEEECCGGGSSCSEE
T ss_pred ----eeEEEeeccccCceeeee
Confidence 247899999999886543
No 7
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=99.80 E-value=4.2e-19 Score=151.24 Aligned_cols=165 Identities=12% Similarity=0.104 Sum_probs=134.9
Q ss_pred CCCCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHHHHcc--cCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEe
Q psy12986 38 APTAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMKLACE--LYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI 115 (230)
Q Consensus 38 ~~~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~ 115 (230)
...++++++|+|||||||.||+|+++|+++..+......... ....++.+..+|++|..+.....+.+...++.+++.
T Consensus 149 ~~~~~~~a~i~~TSGTTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 228 (503)
T d3cw9a1 149 QREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVV 228 (503)
T ss_dssp CCCTTSEEEEEEECCSSSSCEEEEEEGGGHHHHHHHHHHTSCCCSSTTCEEEECSCTTSHHHHHTTHHHHHHTTCEEEEC
T ss_pred cchhhhhhhhcccccccccccccccccchhhhhhhhccccccccccccccccccCccccccccccccccccccccccccc
Confidence 446789999999999999999999999999998887776544 345688899999999888777677777888888877
Q ss_pred CCchhhcChHHHHHHHhhcceeEEEechhhHHHHHhhcCCCcccccccCCCCccceeeeeecCCCCChhHHHHHHHHhhh
Q psy12986 116 PPSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCTKGLSGSIPQLKARNIALGCVRTCVVVAEERPRIHLTSAFSKLFSA 195 (230)
Q Consensus 116 ~~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~sl~~~~~gg~~~~~~~~~~~~~~~~~~ 195 (230)
+++ ++..++..+.+++++....+|..+..+...... ......+++||.+++||+ ++++++..++.+.+.
T Consensus 229 ~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~Lr~i~~gG~-~~~~~~~~~~~~~~~- 297 (503)
T d3cw9a1 229 EEF----RPVDALQLVQQEQVTSLFATPTHLDALAAAAAH-----AGSSLKLDSLRHVTFAGA-TMPDAVLETVHQHLP- 297 (503)
T ss_dssp SSC----CHHHHHHHHHHHTCCEEEECHHHHHHHHHHHHH-----TCTTCCCTTCCEEEECSS-CCCHHHHHHHHHHCC-
T ss_pred ccc----ChHHhhhhhhhceeecccccccccccccccccc-----ccccccccceEEEEeccc-ccccccccccccccc-
Confidence 654 588899999999999999999988776543211 234557789999999998 799999999998873
Q ss_pred CCCCccccccccCCCcceeEEee
Q psy12986 196 LGLSPRAVSTSFGCRVNIAICLQ 218 (230)
Q Consensus 196 ~gl~~~~~~~~YG~te~~~~~~~ 218 (230)
..+.+.||++|++..+..
T Consensus 298 -----~~~~~~yg~~e~~~~~~~ 315 (503)
T d3cw9a1 298 -----GEKVNIYGTTEAMNSLYM 315 (503)
T ss_dssp -----SEEEEEEEETTTEEEEEE
T ss_pred -----ccccccccccccceeeee
Confidence 347899999998876554
No 8
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=87.80 E-value=2.4 Score=34.03 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=68.8
Q ss_pred EEEccCCCCCceeeeccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeCCchhhcC
Q psy12986 47 LDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVN 123 (230)
Q Consensus 47 i~~TSGtTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~ 123 (230)
+.++.+.++ ..+|.+.+...+..+. ...|+.++|++..+++-.. .+...+++++..|+..+.+.+. ..
T Consensus 37 ~a~~d~~~~----~~lTy~el~~~~~~lA~~L~~~Gi~~Gd~Vai~~~ns~--e~~v~~lA~~~~G~i~vpl~~~---~~ 107 (541)
T d1lcia_ 37 IAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSL--QFFMPVLGALFIGVAVAPANDI---YN 107 (541)
T ss_dssp EEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCS--STHHHHHHHHHHTCEEEECCTT---CC
T ss_pred EEEEeCCCC----eEeeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCCCH--HHHHHHHHHHHhCeEEEecCCC---CC
Confidence 344555444 4589998887655443 3578899999988887543 3455588899999988887653 35
Q ss_pred hHHHHHHHhhcceeEEEechhhHHHHH
Q psy12986 124 PALWLSAVSQYRVRDTFCSYGVMELCT 150 (230)
Q Consensus 124 p~~~~~~i~~~~it~~~~~p~~~~~~~ 150 (230)
+.++...++..+++.+++....++.+.
T Consensus 108 ~~~l~~~l~~~~~~~vi~~~~~~~~~~ 134 (541)
T d1lcia_ 108 ERELLNSMNISQPTVVFVSKKGLQKIL 134 (541)
T ss_dssp HHHHHHHHHHHCCSEEEECGGGHHHHH
T ss_pred HHHHHHHHHhccceEEeeeccccccch
Confidence 788889999999999998877665543
No 9
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=85.28 E-value=4.1 Score=31.92 Aligned_cols=90 Identities=13% Similarity=0.176 Sum_probs=64.9
Q ss_pred CCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeCC
Q psy12986 41 AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 117 (230)
Q Consensus 41 ~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~ 117 (230)
|+.+|++.-.+| ..+|.+.+...+..+. ...++.++|++..++|- ...++..+++++..|+..+.+++
T Consensus 16 pd~~al~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~Gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~v~vpi~~ 86 (503)
T d3cw9a1 16 PDHCALAVPARG-------LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPN--SADVVIAILALHRLGAVPALLNP 86 (503)
T ss_dssp TTSEEEEEGGGT-------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCS--CHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCeEEEECCCC-------cEEeHHHHHHHHHHHHHHHHHcCcCCCCEEEEEeCC--CHHHHHHHHHHHHhCcEEEEeCC
Confidence 566665543333 3578888776654443 35678899999888773 44566668999999999998876
Q ss_pred chhhcChHHHHHHHhhcceeEEEec
Q psy12986 118 SEVEVNPALWLSAVSQYRVRDTFCS 142 (230)
Q Consensus 118 ~~~~~~p~~~~~~i~~~~it~~~~~ 142 (230)
. ..+.++..++++.++..++..
T Consensus 87 ~---~~~~~i~~~l~~~~~~~~i~~ 108 (503)
T d3cw9a1 87 R---LKSAELAELIKRGEMTAAVIA 108 (503)
T ss_dssp T---SCHHHHHHHHHHTTCSEEEES
T ss_pred C---CCHHHHHHHHHhcCCcEEEee
Confidence 4 357788889999999887655
No 10
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=79.38 E-value=13 Score=29.28 Aligned_cols=97 Identities=6% Similarity=0.061 Sum_probs=71.7
Q ss_pred CCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeC
Q psy12986 40 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 116 (230)
Q Consensus 40 ~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~ 116 (230)
.|+.+|++. . +-.+|.+.+...+..+. ...++.++|++...+|=. ..++...++.+..|+..+.+.
T Consensus 36 ~Pd~~Al~~--~-------~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~--~~~v~~~la~~~~G~v~v~l~ 104 (514)
T d1amua_ 36 RPNNVAIVC--E-------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKS--IDLFIGILAVLKAGGAYVPID 104 (514)
T ss_dssp CTTSEEEEE--T-------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSS--HHHHHHHHHHHHTTCEEEECC
T ss_pred CCCCeEEEE--C-------CeeEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCC--HHHHHHHHHHHHhCcEEEEeC
Confidence 467777663 1 12589998887665544 357889999998888754 445666889999999998886
Q ss_pred CchhhcChHHHHHHHhhcceeEEEechhhHHHHH
Q psy12986 117 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMELCT 150 (230)
Q Consensus 117 ~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~~~ 150 (230)
+. ..+.++...++..++..++........+.
T Consensus 105 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 135 (514)
T d1amua_ 105 IE---YPKERIQYILDDSQARMLLTQKHLVHLIH 135 (514)
T ss_dssp TT---SCHHHHHHHHHHHTCSEEEECGGGHHHHT
T ss_pred CC---CCHHHHHHHHhccCCcEEEEehhhhhhhh
Confidence 53 35788888999999999888777666544
No 11
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=76.74 E-value=15 Score=30.27 Aligned_cols=94 Identities=12% Similarity=0.059 Sum_probs=67.1
Q ss_pred CCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeCC
Q psy12986 41 AEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPP 117 (230)
Q Consensus 41 ~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~ 117 (230)
++.+|+| |-+.-+|..| .+|.+.+...+..+. ...|+.++|++...+|-.. .++..+++++..|+..+.+.+
T Consensus 86 ~d~~Ali-~~~~~~~~~~--~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~--e~iv~~lA~~~~Gav~v~l~~ 160 (643)
T d1pg4a_ 86 GDRTAII-WEGDDTSQSK--HISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVP--EAAVAMLACARIGAVHSVIFG 160 (643)
T ss_dssp TTSEEEE-EECSSTTCEE--EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSH--HHHHHHHHHHHHTCEEEECCT
T ss_pred CCCEEEE-EEecCCCCce--EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccch--HHHHHHHHHHHhCeEEEecCC
Confidence 4566654 4444445433 578888777654443 4578899999999998654 345558888999998888765
Q ss_pred chhhcChHHHHHHHhhcceeEEEec
Q psy12986 118 SEVEVNPALWLSAVSQYRVRDTFCS 142 (230)
Q Consensus 118 ~~~~~~p~~~~~~i~~~~it~~~~~ 142 (230)
. ..+..+...+.+.++..+++.
T Consensus 161 ~---~~~~~l~~~l~~~~~~~li~~ 182 (643)
T d1pg4a_ 161 G---FSPEAVAGCIIDSSSRLVITA 182 (643)
T ss_dssp T---SCHHHHHHHHHHHTCSEEEEE
T ss_pred C---CCHHHHHHHHHhcCCCEEEEc
Confidence 3 357888999999999887764
No 12
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=75.93 E-value=14 Score=29.02 Aligned_cols=77 Identities=8% Similarity=0.012 Sum_probs=58.9
Q ss_pred eccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeCCchhhcChHHHHHHHhhccee
Q psy12986 61 KMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVR 137 (230)
Q Consensus 61 ~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~p~~~~~~i~~~~it 137 (230)
.+|.+.+...+..+. ...++.++|++...+|-. ..++..+++++..|+..+.+.+.. .+.+....+...++.
T Consensus 50 ~~Ty~el~~~v~~~A~~L~~~Gv~~gd~V~i~~~n~--~~~~v~~lA~~~~G~i~vpl~~~~---~~~~~~~~l~~~~~~ 124 (536)
T d1mdba_ 50 HWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNI--KEFFEVIFALFRLGALPVFALPSH---RSSEITYFCEFAEAA 124 (536)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSS--HHHHHHHHHHHHHTCEEEECCTTC---CHHHHHHHHHHTTCS
T ss_pred eEcHHHHHHHHHHHHHHHHHcCcCCcCEEEEEeCCC--HHHHHHHHHHHHhCcEEEecCCCC---CHHHHHHHHHhhccc
Confidence 589998887665543 356789999998887744 556666899999999999886643 577888899999988
Q ss_pred EEEec
Q psy12986 138 DTFCS 142 (230)
Q Consensus 138 ~~~~~ 142 (230)
.++..
T Consensus 125 ~~~~~ 129 (536)
T d1mdba_ 125 AYIIP 129 (536)
T ss_dssp EEEEE
T ss_pred eEecc
Confidence 77664
No 13
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=75.70 E-value=17 Score=28.75 Aligned_cols=99 Identities=9% Similarity=-0.065 Sum_probs=70.3
Q ss_pred CCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH---HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEeC
Q psy12986 40 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK---LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILIP 116 (230)
Q Consensus 40 ~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~~ 116 (230)
.|+.++++...+|- .-.+|...+...+..+. ...|+.++|++...++-. ..++..+++++..|+..+.++
T Consensus 24 ~pd~~av~~~~~g~-----~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~ 96 (534)
T d1v25a_ 24 FGRKEVVSRLHTGE-----VHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNH--FRHLEAYFAVPGMGAVLHTAN 96 (534)
T ss_dssp STTCEEEEECTTSC-----EEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSS--HHHHHHHHHHHHTTCEEEECC
T ss_pred cCCCeEEEEecCCc-----eEEEcHHHHHHHHHHHHHHHHHCCcCCCCEEEEEeCCC--HHHHHHHHHHHHhCcEEEecC
Confidence 35677766555432 23478888877655443 357888999998888754 456666889999999888886
Q ss_pred CchhhcChHHHHHHHhhcceeEEEechhhHHH
Q psy12986 117 PSEVEVNPALWLSAVSQYRVRDTFCSYGVMEL 148 (230)
Q Consensus 117 ~~~~~~~p~~~~~~i~~~~it~~~~~p~~~~~ 148 (230)
+. ..+.++...++..++..++........
T Consensus 97 ~~---~~~~~l~~~l~~~~~~~i~~~~~~~~~ 125 (534)
T d1v25a_ 97 PR---LSPKEIAYILNHAEDKVLLFDPNLLPL 125 (534)
T ss_dssp TT---SCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CC---CCHHHHHHHHHhhccccccccchhhhh
Confidence 53 257788889999999888776555443
No 14
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.21 E-value=31 Score=27.99 Aligned_cols=96 Identities=8% Similarity=0.054 Sum_probs=67.0
Q ss_pred CCCceEEEEEccCCCCCceeeeccHHHHHHHHHHHH----HHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCceeEEe
Q psy12986 40 TAEMLAYLDFSVSTTGMLAGIKMSHAAVTSLCRSMK----LACELYPSRHIALCLDPYCGLGFALWVLSSVYSGHHSILI 115 (230)
Q Consensus 40 ~~~~~~~i~~TSGtTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~~~v~~ 115 (230)
.++.+|.| |-+.-+|. +..+|.+.+...+..+. ..+|+.++|++..++|-. ..++..+++++..|+..+.+
T Consensus 72 ~pd~~Ali-~~~~~~g~--~~~~Ty~eL~~~v~~~A~~L~~~~Gv~~Gd~V~i~~~n~--~e~~~~~lA~~~~Gav~vpi 146 (640)
T d1ry2a_ 72 TPNKKAII-FEGDEPGQ--GYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMV--PEAIITLLAISRIGAIHSVV 146 (640)
T ss_dssp CTTSEEEE-EECSSTTC--CEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSS--HHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEE-EEecCCCC--eeEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCC--HHHHHHHHHhccCceEeecC
Confidence 46677766 44444453 34678888876654433 356889999999888744 45566688888999988877
Q ss_pred CCchhhcChHHHHHHHhhcceeEEEech
Q psy12986 116 PPSEVEVNPALWLSAVSQYRVRDTFCSY 143 (230)
Q Consensus 116 ~~~~~~~~p~~~~~~i~~~~it~~~~~p 143 (230)
.+. ..+.++...+.+.++..++...
T Consensus 147 ~~~---~~~~~l~~~~~~~~~~~~~~~~ 171 (640)
T d1ry2a_ 147 FAG---FSSNSLRDRINDGDSKVVITTD 171 (640)
T ss_dssp CTT---SCHHHHHHHHHHHTCSEEEEES
T ss_pred CCC---CCHHHHHHHHHhhhccccccch
Confidence 653 2477888889988888777653
No 15
>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=59.00 E-value=21 Score=23.64 Aligned_cols=55 Identities=5% Similarity=-0.103 Sum_probs=38.6
Q ss_pred eEEEecC-CcCchhHHHHHHHHhhhCceeEEeCCchhhcChHHHHHHHhhcceeEEEec
Q psy12986 85 HIALCLD-PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCS 142 (230)
Q Consensus 85 ~~l~~~p-l~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~p~~~~~~i~~~~it~~~~~ 142 (230)
+++.+.+ =.|++|....-...-..|..++.+.... .+..|.+.+.++++..+.+.
T Consensus 9 ivi~tv~gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~---p~e~~~~~~~~~~~d~i~lS 64 (156)
T d3bula2 9 MVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMV---PAEKILRTAKEVNADLIGLS 64 (156)
T ss_dssp EEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSB---CHHHHHHHHHHHTCSEEEEE
T ss_pred EEEEeeCCChhhHHHHHHHHHHHHCCCEEEECCCCC---CHHHHHHHHHhhCCCEEEEe
Confidence 4444443 4688887653333345688888886543 48999999999999888765
No 16
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=51.01 E-value=27 Score=22.46 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=37.4
Q ss_pred eEEEecC-CcCchhHHHHHHHHhhhCceeEEeCCchhhcChHHHHHHHhhcceeEEEec
Q psy12986 85 HIALCLD-PYCGLGFALWVLSSVYSGHHSILIPPSEVEVNPALWLSAVSQYRVRDTFCS 142 (230)
Q Consensus 85 ~~l~~~p-l~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~p~~~~~~i~~~~it~~~~~ 142 (230)
+++...+ =.|+.|..+.-...=..|..++.+.... .+..+.+++.++++..+.+.
T Consensus 6 Vvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~---p~e~iv~a~~~~~~d~v~lS 61 (137)
T d1ccwa_ 6 IVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLS---PQELFIKAAIETKADAILVS 61 (137)
T ss_dssp EEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEE---CHHHHHHHHHHHTCSEEEEE
T ss_pred EEEEecCCChhHHHHHHHHHHHHHCCCeEEeccccc---CHHHHHHHHHhcCCCEEEEe
Confidence 3344433 4688886653333335699999886533 37889999999999888775
No 17
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=42.83 E-value=19 Score=23.98 Aligned_cols=54 Identities=7% Similarity=0.076 Sum_probs=34.6
Q ss_pred eEEEecC-CcCchhHHHHHHHHhh-hC---------ceeEEeCCchhhcChHHHHHHHhhcceeEEEec
Q psy12986 85 HIALCLD-PYCGLGFALWVLSSVY-SG---------HHSILIPPSEVEVNPALWLSAVSQYRVRDTFCS 142 (230)
Q Consensus 85 ~~l~~~p-l~~~~g~~~~~~~~l~-~G---------~~~v~~~~~~~~~~p~~~~~~i~~~~it~~~~~ 142 (230)
+++...- =-|+.|.-. +...+- .| ..++.+... ..|+.+.+.+.++++..+.+.
T Consensus 22 vv~~~~g~D~HdiG~~i-v~~~l~~~G~~~~~~~~~~eVi~LG~~---vp~e~~v~~a~e~~~d~VglS 86 (160)
T d1xrsb1 22 VVGASTGTDAHTVGIDA-IMNMKGYAGHYGLERYEMIDAYNLGSQ---VANEDFIKKAVELEADVLLVS 86 (160)
T ss_dssp EEEEEBTTCCCCHHHHH-HHSTTCBTTBCCGGGCTTEEEEECCSS---BCHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEeCCcHHHHHHHH-HHHHHHHcCCcccccccceEEEeCCCC---CCHHHHHHHHHhcCCCEEEEe
Confidence 3334433 568888654 333332 24 467766543 358999999999999877665
No 18
>d2ewca1 d.79.1.1 (A:3-122) Hypothetical protein SPy2060 {Streptococcus pyogenes [TaxId: 1314]}
Probab=26.89 E-value=17 Score=22.90 Aligned_cols=40 Identities=8% Similarity=-0.114 Sum_probs=26.6
Q ss_pred EEccCCCCC-ceeeeccHHHHHHHHHHHHHHcccCCCCeEE
Q psy12986 48 DFSVSTTGM-LAGIKMSHAAVTSLCRSMKLACELYPSRHIA 87 (230)
Q Consensus 48 ~~TSGtTG~-PKgV~~th~~l~~~~~~~~~~~~~~~~~~~l 87 (230)
+|.||.||. ++.+.---++.+.++.......|.+.+|++-
T Consensus 23 i~vsg~~G~v~~~~~~Q~~~a~~ni~~iL~~aG~~~~dVvk 63 (120)
T d2ewca1 23 YYLNYCVGNVGQDIESQINGAFDEMERRLALVGLTLDAVVQ 63 (120)
T ss_dssp EEEEEECCSTTSCHHHHHHHHHHHHHHHHHTTTCCGGGEEE
T ss_pred EEECCcccccCCCHHHHHHHHHHHHHHHHHhccCCHHHhee
Confidence 345777776 6666555556667777777777877777553
No 19
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.84 E-value=63 Score=23.74 Aligned_cols=51 Identities=14% Similarity=0.050 Sum_probs=36.7
Q ss_pred eeeeccHHHHHHHHHHHHHHcccCCCCeEEEecCCcCchhHHHHHHHHhhhCc
Q psy12986 58 AGIKMSHAAVTSLCRSMKLACELYPSRHIALCLDPYCGLGFALWVLSSVYSGH 110 (230)
Q Consensus 58 KgV~~th~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~~~l~~G~ 110 (230)
||+.++- ..+..+....+.+..+++|++++..| -.+..|+..++..++...
T Consensus 37 ~g~~~~~-~~~~~~~~~~~~f~~r~~DI~I~S~P-KSGTTWl~~il~~i~~~~ 87 (320)
T d1q44a_ 37 QGLWHTQ-AILQGILICQKRFEAKDSDIILVTNP-KSGTTWLKALVFALLNRH 87 (320)
T ss_dssp TTEEECH-HHHHHHHHHHHHCCCCTTCEEEECCT-TSCCHHHHHHHHHHHTTT
T ss_pred CCEeeCH-HHhHHHHHHHhCCCCCCCCEEEEcCC-CcHHHHHHHHHHHHHhCC
Confidence 7788874 45566666777888999999999999 555566665666666543
No 20
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.43 E-value=5.9 Score=28.10 Aligned_cols=17 Identities=18% Similarity=0.239 Sum_probs=11.5
Q ss_pred ccCCCCCceeeeccHHHH
Q psy12986 50 SVSTTGMLAGIKMSHAAV 67 (230)
Q Consensus 50 TSGtTG~PKgV~~th~~l 67 (230)
||..|| ||||+---+.+
T Consensus 3 ~~~nTG-pKGVi~D~r~~ 19 (217)
T d2trcp_ 3 QATHTG-PKGVINDWRKF 19 (217)
T ss_dssp SCCSSH-HHHHHHHHHHH
T ss_pred CCCCCC-ccccHHHHHHH
Confidence 566788 89987554433
Done!