BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12987
(82 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|241570173|ref|XP_002402668.1| DNA-repair protein xrcc1, putative [Ixodes scapularis]
gi|215502056|gb|EEC11550.1| DNA-repair protein xrcc1, putative [Ixodes scapularis]
Length = 235
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 55/77 (71%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS+SSED VHKA+NLL E +KWKC + GEKQA ILQL I+ IDI
Sbjct: 1 MPVIKLQHVVSFSSEDKVHKAENLLKSERYRKWKCATAGEKQASVILQLEKASVISSIDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAF+EV VA+SS+
Sbjct: 61 GNESSAFIEVLVARSSD 77
>gi|91080991|ref|XP_975029.1| PREDICTED: similar to DNA-repair protein XRCC1 (X-ray repair
cross-complementing protein 1) [Tribolium castaneum]
Length = 533
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS+SSED VH A+N+LN + KKWKCK GE+ A +LQL I+ +DI
Sbjct: 1 MPKIKLDHVVSFSSEDSVHVANNVLNSDPAKKWKCKDAGERSATIVLQLEKASLISALDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDDYK 82
GNE SA++EV V++S DD+K
Sbjct: 61 GNENSAYIEVLVSRSGTTDDFK 82
>gi|270005349|gb|EFA01797.1| hypothetical protein TcasGA2_TC007398 [Tribolium castaneum]
Length = 556
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS+SSED VH A+N+LN + KKWKCK GE+ A +LQL I+ +DI
Sbjct: 1 MPKIKLDHVVSFSSEDSVHVANNVLNSDPAKKWKCKDAGERSATIVLQLEKASLISALDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDDYK 82
GNE SA++EV V++S DD+K
Sbjct: 61 GNENSAYIEVLVSRSGTTDDFK 82
>gi|312381959|gb|EFR27566.1| hypothetical protein AND_05657 [Anopheles darlingi]
Length = 619
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M +KF + S+SSEDP + A NLL P++ +KWKC+ GE+ A +++L VQI+GIDI
Sbjct: 1 MPTVKFKAIESFSSEDPNYPASNLLRPDN-RKWKCRQPGEQTAFVVIRLEEPVQISGIDI 59
Query: 61 GNEFSAFVEVFVAKS--SNP 78
GNE SAF+EV VA+S +NP
Sbjct: 60 GNEHSAFIEVLVARSGPANP 79
>gi|260836947|ref|XP_002613467.1| hypothetical protein BRAFLDRAFT_277469 [Branchiostoma floridae]
gi|229298852|gb|EEN69476.1| hypothetical protein BRAFLDRAFT_277469 [Branchiostoma floridae]
Length = 644
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I +VVS+SSED H A+NLL E+ +KWK S+GEKQ AI+Q QI+ IDI
Sbjct: 1 MPEIHLQKVVSFSSEDKTHTAENLLKSETYRKWKSGSVGEKQVTAIIQFDEPSQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDD 80
GNE SAFVEV V ++S D
Sbjct: 61 GNENSAFVEVLVGRASAQSD 80
>gi|337743301|gb|AEI73147.1| XRCC1 [Kryptolebias marmoratus]
Length = 102
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 52/80 (65%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK RVVS SSED HKA+NLL+ ++ +KWK GEKQ ILQ + Q++ IDI
Sbjct: 1 MPEIKLKRVVSCSSEDSTHKANNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDD 80
GNE SAF+EV V SS D
Sbjct: 61 GNEGSAFIEVLVGNSSAVRD 80
>gi|340375016|ref|XP_003386033.1| PREDICTED: DNA repair protein XRCC1-like [Amphimedon
queenslandica]
Length = 555
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK V S SSEDP H ADNLL E+ +KW+C S GEKQAV +++ I+ +DI
Sbjct: 1 MPEIKLKHVCSVSSEDPNHPADNLLGQETYRKWQCDSAGEKQAVVVIEFDKASVIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDDYK 82
GN SAF+EV V S + DY+
Sbjct: 61 GNNGSAFIEVLVGNSLSSSDYE 82
>gi|51571935|ref|NP_001003988.1| DNA repair protein XRCC1 [Danio rerio]
gi|51330093|gb|AAH80268.1| Zgc:91996 [Danio rerio]
gi|182890918|gb|AAI65774.1| Zgc:91996 protein [Danio rerio]
Length = 615
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M +K VVS SSED HKADNLL+ ++ +KWK GEKQ ILQL + QI+ IDI
Sbjct: 1 MPELKLKHVVSCSSEDNTHKADNLLSSDTYRKWKAARPGEKQVSVILQLEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDD 80
GNE SAF+EV V S++ D
Sbjct: 61 GNEGSAFIEVLVGHSTSVKD 80
>gi|410904431|ref|XP_003965695.1| PREDICTED: DNA repair protein XRCC1-like [Takifugu rubripes]
Length = 620
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS S+EDP H+A+NLLN ++ +KWK GEKQ ILQ + QI+ IDI
Sbjct: 1 MPEIEVKHVVSCSTEDPTHRAENLLNFDTYRKWKAARPGEKQISVILQFEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GNE SAF+E+ V SS
Sbjct: 61 GNEGSAFIEILVGNSS 76
>gi|348527426|ref|XP_003451220.1| PREDICTED: DNA repair protein XRCC1-like [Oreochromis niloticus]
Length = 622
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 50/76 (65%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS S+ED HKADNLL+ ++ +KWK GEKQ ILQ + Q++ IDI
Sbjct: 1 MPEIKLKHVVSCSTEDSTHKADNLLSSDTYRKWKAARPGEKQISVILQFEKEEQVHSIDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GNE SAF+EV V SS
Sbjct: 61 GNEGSAFIEVLVGNSS 76
>gi|347968170|ref|XP_312330.5| AGAP002605-PA [Anopheles gambiae str. PEST]
gi|333468129|gb|EAA07652.5| AGAP002605-PA [Anopheles gambiae str. PEST]
Length = 718
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M + F V S+SSEDP + A NLL P KKWKC++ GE +A +L+L I GIDI
Sbjct: 1 MPSVSFKAVESFSSEDPNYPASNLLKP-GNKKWKCRAAGEPKAFVVLRLEEPAHITGIDI 59
Query: 61 GNEFSAFVEVFVAKS--SNP 78
GNE SA +EV VA+S SNP
Sbjct: 60 GNEHSALIEVLVARSGPSNP 79
>gi|157132063|ref|XP_001662444.1| hypothetical protein AaeL_AAEL002782 [Aedes aegypti]
gi|108881729|gb|EAT45954.1| AAEL002782-PA, partial [Aedes aegypti]
Length = 588
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M + F V S+SSEDP A NLL E +KWKC+ GEK A IL+L + INGID+
Sbjct: 1 MPNVVFKSVESFSSEDPNFPASNLLAKE-VRKWKCRDAGEKNAFIILRLEKPMTINGIDV 59
Query: 61 GNEFSAFVEVFVAKS--SNPD 79
GNE SAFVEV VA+S +NP+
Sbjct: 60 GNEHSAFVEVLVARSGPTNPE 80
>gi|195134192|ref|XP_002011521.1| GI11076 [Drosophila mojavensis]
gi|193906644|gb|EDW05511.1| GI11076 [Drosophila mojavensis]
Length = 570
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Query: 3 PIK-FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIG 61
PI+ F V SSED VH A NLL + KKWK +++GEK A IL+ QI GIDIG
Sbjct: 2 PIEVFKSVREVSSEDAVHVAANLLKENAAKKWKTQAIGEKSAHVILEFEEPQQITGIDIG 61
Query: 62 NEFSAFVEVFVAKSS-NPDDYK 82
NE SAF+EV V+K+ PDD+K
Sbjct: 62 NEHSAFIEVLVSKTGCQPDDFK 83
>gi|195401843|ref|XP_002059520.1| GJ14778 [Drosophila virilis]
gi|194147227|gb|EDW62942.1| GJ14778 [Drosophila virilis]
Length = 608
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A NLL + KKWK ++ GEK A IL+ QINGIDIGNE +
Sbjct: 6 FKSVREVSSEDSVHVAANLLKENAAKKWKTQANGEKSAHVILEFEEPQQINGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+K+ PDD+K
Sbjct: 66 AFIEVLVSKTGCQPDDFK 83
>gi|328715270|ref|XP_001943950.2| PREDICTED: DNA repair protein XRCC1-like [Acyrthosiphon pisum]
Length = 550
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLN-PESTKKWKCKSMGEKQAVAILQLSSQVQINGID 59
M PI R++S SSED HKA+N+LN +S W+CKS GEKQA ILQ I+ ID
Sbjct: 1 MGPIPVDRIISISSEDHAHKAENILNVSDSHHTWRCKS-GEKQATVILQFLKPSVISSID 59
Query: 60 IGNEFSAFVEVFVAKSS 76
+GN+ SAFVE+FV KS+
Sbjct: 60 VGNDNSAFVEIFVGKST 76
>gi|194763805|ref|XP_001964023.1| GF21338 [Drosophila ananassae]
gi|190618948|gb|EDV34472.1| GF21338 [Drosophila ananassae]
Length = 627
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A+NLL + KKW+ KS GEK A IL+ QI GIDIGNE S
Sbjct: 6 FKSVREVSSEDSVHTAENLLKENAGKKWRIKSGGEKSAYVILEFQEAQQITGIDIGNEHS 65
Query: 66 AFVEVFVAKSSNPDDYK 82
AF+E V+++ DD++
Sbjct: 66 AFIEAKVSRTMASDDFR 82
>gi|198469811|ref|XP_001355133.2| GA18032 [Drosophila pseudoobscura pseudoobscura]
gi|198147046|gb|EAL32190.2| GA18032 [Drosophila pseudoobscura pseudoobscura]
Length = 615
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 9 VVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFV 68
V SSEDPVH A+NLL + KKWK +++GEK A IL+ + Q+ GID+GNE +AF+
Sbjct: 9 VREVSSEDPVHVAENLLKENAGKKWKTQAVGEKSAYVILEFAEPQQVTGIDLGNEHAAFI 68
Query: 69 EVFVAKSS-NPDDYK 82
EV V+++ DD+K
Sbjct: 69 EVLVSRTGCKADDFK 83
>gi|443690382|gb|ELT92521.1| hypothetical protein CAPTEDRAFT_181480 [Capitella teleta]
Length = 649
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 53/80 (66%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IKF VVS+SSED A+NLL ++ KKWK S+G KQ LQL +I+ +DI
Sbjct: 1 MPEIKFQHVVSFSSEDKNFAAENLLKGDNFKKWKGLSIGSKQETVTLQLDKAERIHQVDI 60
Query: 61 GNEFSAFVEVFVAKSSNPDD 80
GNE SAF+EV V +SS+ +D
Sbjct: 61 GNESSAFIEVLVGRSSSKED 80
>gi|195163632|ref|XP_002022653.1| GL14681 [Drosophila persimilis]
gi|194104676|gb|EDW26719.1| GL14681 [Drosophila persimilis]
Length = 615
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 9 VVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFV 68
V SSEDPVH A+NLL + KKWK +++GEK A IL+ + Q+ GID+GNE +AF+
Sbjct: 9 VREVSSEDPVHVAENLLKENAGKKWKTQAVGEKSAYVILEFADPQQVTGIDLGNEHAAFI 68
Query: 69 EVFVAKSS-NPDDYK 82
EV V+++ DD+K
Sbjct: 69 EVLVSRTGCKADDFK 83
>gi|195476884|ref|XP_002100020.1| GE16396 [Drosophila yakuba]
gi|194187544|gb|EDX01128.1| GE16396 [Drosophila yakuba]
Length = 632
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH ADNLL + KKW+ K+ GEK A +L+ + QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDVVHVADNLLKENAGKKWRTKAAGEKSAYVVLEFAEPQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|148224620|ref|NP_001080711.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Xenopus laevis]
gi|27924221|gb|AAH45032.1| Xrcc1-prov protein [Xenopus laevis]
Length = 651
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS SS D H A+NLL ++ +KWK GEKQ ILQ + QI+ IDI
Sbjct: 1 MPVIKLKHVVSCSSADTTHTAENLLKADTYRKWKAARPGEKQISLILQFEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAFVEV V +S++
Sbjct: 61 GNEGSAFVEVLVGRSTS 77
>gi|195565174|ref|XP_002106179.1| GD16724 [Drosophila simulans]
gi|194203551|gb|EDX17127.1| GD16724 [Drosophila simulans]
Length = 641
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH ADNLL + KKW+ K+ GEK A +L+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDAVHVADNLLKENAGKKWRTKAPGEKSAYVVLEFEEPHQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|301619608|ref|XP_002939185.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein XRCC1 [Xenopus
(Silurana) tropicalis]
Length = 653
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS SS D H A+NLL ++ +KWK GEKQ ILQ + Q++ IDI
Sbjct: 1 MPEIKLKHVVSCSSADTTHTAENLLKADTYRKWKAARPGEKQISVILQFEKEEQVHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAFVEV V S++
Sbjct: 61 GNEGSAFVEVLVGHSTS 77
>gi|395528454|ref|XP_003766344.1| PREDICTED: DNA repair protein XRCC1 [Sarcophilus harrisii]
Length = 501
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 49/76 (64%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+DP H A+NLL ++ +KW+ GEKQ ILQL + QI+ IDI
Sbjct: 1 MPEIRLRHVVSCSSQDPTHCAENLLKADTYRKWRSAKAGEKQISVILQLEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GNE SAFVEV S+
Sbjct: 61 GNEGSAFVEVLAGSSA 76
>gi|194888690|ref|XP_001976957.1| GG18754 [Drosophila erecta]
gi|190648606|gb|EDV45884.1| GG18754 [Drosophila erecta]
Length = 626
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A+NLL + KKW+ K+ GEK A +L+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDAVHVAENLLKENAGKKWRTKAAGEKSAYVVLEFEEPQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|195340651|ref|XP_002036926.1| GM12402 [Drosophila sechellia]
gi|194131042|gb|EDW53085.1| GM12402 [Drosophila sechellia]
Length = 621
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A+NLL + KKW+ K+ GEK A +L+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDAVHVAENLLKENAGKKWRTKAPGEKSAYVVLEFEEPQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|327276315|ref|XP_003222915.1| PREDICTED: DNA repair protein XRCC1-like [Anolis carolinensis]
Length = 656
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 46/77 (59%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I V S SS DP H A+NLL ++ +KWK GEKQ ILQ + QI+ IDI
Sbjct: 1 MPEIGIRHVASASSSDPTHCAENLLKADTYRKWKAAQAGEKQISVILQFEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAFVEV S++
Sbjct: 61 GNEGSAFVEVLAGSSAS 77
>gi|195457306|ref|XP_002075517.1| GK18507 [Drosophila willistoni]
gi|194171602|gb|EDW86503.1| GK18507 [Drosophila willistoni]
Length = 597
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTK-KWKCKSMGEKQAVAILQLSSQVQINGIDIGNEF 64
F V SSED VH A NLL +S K KWK + GEK A IL+ + QI GIDIGNE
Sbjct: 6 FQAVREVSSEDTVHVAANLLKEQSGKLKWKTQQTGEKSAYVILEFNEPQQITGIDIGNEH 65
Query: 65 SAFVEVFVAKSS-NPDDY 81
SAF+EV V++S P+D+
Sbjct: 66 SAFIEVMVSRSGCQPNDF 83
>gi|170054349|ref|XP_001863088.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874694|gb|EDS38077.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 615
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQL-SSQVQINGID 59
M + A + S+SSEDP A NLL E T++WKC+ GEK A + +L V I GID
Sbjct: 1 MPTVSLASIESFSSEDPNFPASNLLAKE-TRRWKCRDAGEKSAFVVFRLDGGAVCITGID 59
Query: 60 IGNEFSAFVEVFVAKS 75
IGNE SAFVEV V +S
Sbjct: 60 IGNEHSAFVEVLVGRS 75
>gi|170053758|ref|XP_001862822.1| DNA-repair protein XRCC1 [Culex quinquefasciatus]
gi|167874131|gb|EDS37514.1| DNA-repair protein XRCC1 [Culex quinquefasciatus]
Length = 665
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQL-SSQVQINGID 59
M + A + S+SSEDP A NLL E T++WKC+ GEK A + +L V I GID
Sbjct: 1 MPTVSLASIESFSSEDPNFPASNLLAKE-TRRWKCRDAGEKSAFVVFRLDGGAVCITGID 59
Query: 60 IGNEFSAFVEVFVAKS 75
IGNE SAFVEV V +S
Sbjct: 60 IGNEHSAFVEVLVGRS 75
>gi|4928446|gb|AAD33589.1|AF132142_1 DNA repair protein XRCC1 [Drosophila melanogaster]
Length = 614
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A NLL + KKW+ K+ GEK A +L+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDAVHVAANLLKENAGKKWRTKAPGEKSAYVVLEFEEPQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|18858235|ref|NP_572217.1| XRCC1 [Drosophila melanogaster]
gi|5102605|emb|CAB45234.1| XRCC1 protein [Drosophila melanogaster]
gi|7290575|gb|AAF46025.1| XRCC1 [Drosophila melanogaster]
gi|219990651|gb|ACL68699.1| FI04011p [Drosophila melanogaster]
Length = 614
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A NLL + KKW+ K+ GEK A +L+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDAVHVAANLLKENAGKKWRTKAPGEKSAYVVLEFEEPQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKSS-NPDDYK 82
AF+EV V+++ DD++
Sbjct: 66 AFIEVLVSRTGCQADDFR 83
>gi|198414445|ref|XP_002129902.1| PREDICTED: similar to X-ray repair complementing defective repair
in Chinese hamster cells 1 [Ciona intestinalis]
Length = 480
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS+SSE HK +NLL + KWKC GEKQ+ + Q +I+ IDI
Sbjct: 1 MPQIKLEHVVSFSSEHKEHKVENLLK---SGKWKCAKPGEKQSFVVFQFKKATKISSIDI 57
Query: 61 GNEFSAFVEVFVAKSSNPDDYK 82
GN+ SAFVEV V +S + Y+
Sbjct: 58 GNDGSAFVEVLVCRSGGEEKYE 79
>gi|355703612|gb|EHH30103.1| hypothetical protein EGK_10694 [Macaca mulatta]
Length = 633
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAFVEV V S+
Sbjct: 61 GNEGSAFVEVLVGSSAG 77
>gi|380789483|gb|AFE66617.1| DNA repair protein XRCC1 [Macaca mulatta]
gi|383410881|gb|AFH28654.1| DNA repair protein XRCC1 [Macaca mulatta]
Length = 633
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GNE SAFVEV V S+
Sbjct: 61 GNEGSAFVEVLVGSSAG 77
>gi|195997177|ref|XP_002108457.1| hypothetical protein TRIADDRAFT_19032 [Trichoplax adhaerens]
gi|190589233|gb|EDV29255.1| hypothetical protein TRIADDRAFT_19032, partial [Trichoplax
adhaerens]
Length = 600
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I F+ +VS SSED V+ A NLLN ++ +KWK G+KQ I+Q + +I+ I I
Sbjct: 4 MPEIAFSHIVSCSSEDKVYCAKNLLNADTFRKWKSADPGDKQVAVIIQFNKAEKIDSIHI 63
Query: 61 GNEFSAFVEVFVAKSS 76
GNE SAF+EV V KS+
Sbjct: 64 GNEGSAFIEVLVGKSA 79
>gi|26338243|dbj|BAC32807.1| unnamed protein product [Mus musculus]
Length = 101
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|149056656|gb|EDM08087.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_d [Rattus norvegicus]
Length = 509
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H+A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHRAENLLKADTYRKWRSAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|295321723|pdb|3K75|B Chain B, X-Ray Crystal Structure Of Reduced Xrcc1 Bound To Dna
Pol Beta Catalytic Domain
gi|295321724|pdb|3K75|C Chain C, X-Ray Crystal Structure Of Reduced Xrcc1 Bound To Dna
Pol Beta Catalytic Domain
gi|295321898|pdb|3LQC|A Chain A, X-Ray Crystal Structure Of Oxidized Xrcc1 Bound To Dna
Pol B Thumb Domain
Length = 189
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|16758176|ref|NP_445887.1| DNA repair protein XRCC1 [Rattus norvegicus]
gi|9931538|gb|AAG02212.1|AF290895_1 x-ray repair cross-complementing group 1 protein XRCC1 [Rattus
norvegicus]
Length = 631
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H+A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHRAENLLKADTYRKWRSAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|195046519|ref|XP_001992171.1| GH24614 [Drosophila grimshawi]
gi|193893012|gb|EDV91878.1| GH24614 [Drosophila grimshawi]
Length = 550
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 44/70 (62%)
Query: 6 FARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
F V SSED VH A NLL + KKWK + GEK A IL+ QI GIDIGNE +
Sbjct: 6 FKSVREVSSEDTVHVAANLLQQNAAKKWKTQGNGEKCAYVILEFEEAQQITGIDIGNEHA 65
Query: 66 AFVEVFVAKS 75
AF+EV V+K+
Sbjct: 66 AFIEVLVSKT 75
>gi|84027730|sp|Q9ESZ0.2|XRCC1_RAT RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray
repair cross-complementing protein 1
gi|47477863|gb|AAH70894.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Rattus norvegicus]
gi|149056653|gb|EDM08084.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_a [Rattus norvegicus]
Length = 631
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H+A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHRAENLLKADTYRKWRSAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|295321727|pdb|3K77|A Chain A, X-Ray Crystal Structure Of Xrcc1
gi|295321728|pdb|3K77|B Chain B, X-Ray Crystal Structure Of Xrcc1
gi|295321729|pdb|3K77|C Chain C, X-Ray Crystal Structure Of Xrcc1
gi|295321730|pdb|3K77|D Chain D, X-Ray Crystal Structure Of Xrcc1
gi|295321731|pdb|3K77|E Chain E, X-Ray Crystal Structure Of Xrcc1
gi|295321732|pdb|3K77|F Chain F, X-Ray Crystal Structure Of Xrcc1
gi|295321733|pdb|3K77|G Chain G, X-Ray Crystal Structure Of Xrcc1
gi|295321734|pdb|3K77|H Chain H, X-Ray Crystal Structure Of Xrcc1
Length = 161
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|449678566|ref|XP_002165367.2| PREDICTED: DNA repair protein XRCC1-like, partial [Hydra
magnipapillata]
Length = 292
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
+ VVS+SSEDP A+NLL E+ KWKC S E+QA ILQL +I+ I IGN
Sbjct: 3 LNIKHVVSFSSEDPSFPAENLLKSENYYKWKCASGTERQATVILQLEKVSKIHSIAIGNC 62
Query: 64 FSAFVEVFVAKSS 76
SAF+EV V +SS
Sbjct: 63 GSAFIEVLVGRSS 75
>gi|119577605|gb|EAW57201.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_a [Homo sapiens]
Length = 236
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|74206825|dbj|BAE33228.1| unnamed protein product [Mus musculus]
Length = 631
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V +S+
Sbjct: 61 GNDGSAFVEVLVGRSAG 77
>gi|426389014|ref|XP_004060921.1| PREDICTED: DNA repair protein XRCC1 [Gorilla gorilla gorilla]
Length = 633
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|317373290|sp|P18887.2|XRCC1_HUMAN RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray
repair cross-complementing protein 1
Length = 633
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|21105787|gb|AAM34791.1|AF512504_1 X-ray repair complementing defective repair in Chinese hamster
cells 1 [Homo sapiens]
gi|340397|gb|AAA63270.1| DNA-repair protein [Homo sapiens]
gi|119577606|gb|EAW57202.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_b [Homo sapiens]
gi|119577607|gb|EAW57203.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_b [Homo sapiens]
Length = 633
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|444730691|gb|ELW71065.1| DNA repair protein XRCC1 [Tupaia chinensis]
Length = 669
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|189067519|dbj|BAG37732.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|384941882|gb|AFI34546.1| DNA repair protein XRCC1 [Macaca mulatta]
gi|387540844|gb|AFJ71049.1| DNA repair protein XRCC1 [Macaca mulatta]
Length = 633
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|194374255|dbj|BAG57023.1| unnamed protein product [Homo sapiens]
Length = 400
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|194215555|ref|XP_001499917.2| PREDICTED: DNA repair protein XRCC1 [Equus caballus]
Length = 630
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSLDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|351699580|gb|EHB02499.1| DNA repair protein XRCC1 [Heterocephalus glaber]
Length = 627
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKSISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN SAFVEV V S+
Sbjct: 61 GNNGSAFVEVLVGSSAG 77
>gi|6137643|pdb|1XNA|A Chain A, Nmr Solution Structure Of The Single-Strand Break Repair
Protein Xrcc1-N-Terminal Domain
gi|6137644|pdb|1XNT|A Chain A, Nmr Solution Structure Of The Single-Strand Break Repair
Protein Xrcc1-N-Terminal Domain
Length = 183
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DIGN+
Sbjct: 4 IRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDIGND 63
Query: 64 FSAFVEVFVAKSSN 77
SAFVEV V S+
Sbjct: 64 GSAFVEVLVGSSAG 77
>gi|74219977|dbj|BAE40568.1| unnamed protein product [Mus musculus]
Length = 630
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|397493561|ref|XP_003817672.1| PREDICTED: DNA repair protein XRCC1 [Pan paniscus]
Length = 707
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 115 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 174
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 175 GNDGSAFVEVLVGSSA 190
>gi|409953|gb|AAA93115.1| DNA repair protein [Mus musculus]
Length = 631
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|170295844|ref|NP_033558.3| DNA repair protein XRCC1 [Mus musculus]
gi|84028280|sp|Q60596.2|XRCC1_MOUSE RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray
repair cross-complementing protein 1
gi|33416536|gb|AAH55900.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Mus musculus]
gi|148692381|gb|EDL24328.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_b [Mus musculus]
Length = 631
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|74225140|dbj|BAE38261.1| unnamed protein product [Mus musculus]
Length = 631
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|431909112|gb|ELK12702.1| DNA repair protein XRCC1 [Pteropus alecto]
Length = 595
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHRVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V +S+
Sbjct: 61 GNDGSAFVEVLVGRSA 76
>gi|432109588|gb|ELK33752.1| DNA repair protein XRCC1 [Myotis davidii]
Length = 627
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H ADNLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDTTHCADNLLKADTYRKWRAARAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|350539645|ref|NP_001233608.1| DNA repair protein XRCC1 [Cricetulus griseus]
gi|81870458|sp|O54935.1|XRCC1_CRIGR RecName: Full=DNA repair protein XRCC1; AltName: Full=X-ray
repair cross-complementing protein 1
gi|2906008|gb|AAC40038.1| DNA repair protein XRCC1 [Cricetulus griseus]
Length = 633
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ + GEK +LQL + QI+ IDI
Sbjct: 1 MPEISLRHVVSGSSQDSTHCAENLLKADTYRKWRAATAGEKTISVVLQLEKEEQIHSIDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V +S+
Sbjct: 61 GNDGSAFVEVLVTRSA 76
>gi|55391482|gb|AAH85281.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Mus musculus]
Length = 631
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL + +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKAGTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|74354180|gb|AAI02861.1| XRCC1 protein [Bos taurus]
Length = 281
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D + A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|296233992|ref|XP_002762318.1| PREDICTED: DNA repair protein XRCC1 [Callithrix jacchus]
Length = 689
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 61 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 120
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 121 GNDGSAFVEVLVGSSA 136
>gi|297485676|ref|XP_002695123.1| PREDICTED: DNA repair protein XRCC1 [Bos taurus]
gi|296477555|tpg|DAA19670.1| TPA: X-ray repair complementing defective repair in Chinese
hamster cells 1 [Bos taurus]
Length = 632
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D + A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSAG 77
>gi|440904805|gb|ELR55268.1| DNA repair protein XRCC1, partial [Bos grunniens mutus]
Length = 651
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D + A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 15 MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 74
Query: 61 GNEFSAFVEVFVAKSSN 77
GN+ SAFVEV V S+
Sbjct: 75 GNDGSAFVEVLVGSSAG 91
>gi|441656240|ref|XP_003281242.2| PREDICTED: DNA repair protein XRCC1 isoform 2 [Nomascus leucogenys]
Length = 707
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 77 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 136
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 137 GNDGSAFVEVLVGSSA 152
>gi|410982846|ref|XP_003997757.1| PREDICTED: DNA repair protein XRCC1 isoform 1 [Felis catus]
Length = 631
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|355755903|gb|EHH59650.1| hypothetical protein EGM_09811 [Macaca fascicularis]
Length = 633
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|190684675|ref|NP_006288.2| DNA repair protein XRCC1 [Homo sapiens]
gi|40226177|gb|AAH23593.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Homo sapiens]
gi|48145573|emb|CAG33009.1| XRCC1 [Homo sapiens]
gi|168275708|dbj|BAG10574.1| DNA-repair protein XRCC1 [synthetic construct]
Length = 633
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|297277213|ref|XP_001100256.2| PREDICTED: DNA repair protein XRCC1 [Macaca mulatta]
Length = 617
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 70 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 129
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 130 GNDGSAFVEVLVGSSA 145
>gi|301777123|ref|XP_002923977.1| PREDICTED: DNA repair protein XRCC1-like [Ailuropoda melanoleuca]
gi|281352510|gb|EFB28094.1| hypothetical protein PANDA_013214 [Ailuropoda melanoleuca]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|62087142|dbj|BAD92018.1| X-ray repair cross complementing protein 1 variant [Homo sapiens]
Length = 647
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 15 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 74
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 75 GNDGSAFVEVLVGSSA 90
>gi|403308206|ref|XP_003944561.1| PREDICTED: DNA repair protein XRCC1 [Saimiri boliviensis
boliviensis]
Length = 633
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|402905784|ref|XP_003915690.1| PREDICTED: DNA repair protein XRCC1 [Papio anubis]
Length = 633
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|395751296|ref|XP_002829368.2| PREDICTED: DNA repair protein XRCC1 [Pongo abelii]
Length = 633
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|345784960|ref|XP_533653.3| PREDICTED: DNA repair protein XRCC1 [Canis lupus familiaris]
Length = 629
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|311257696|ref|XP_003127238.1| PREDICTED: DNA repair protein XRCC1 isoform 2 [Sus scrofa]
Length = 630
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|291413779|ref|XP_002723147.1| PREDICTED: X-ray repair complementing defective repair in Chinese
hamster cells 1-like [Oryctolagus cuniculus]
Length = 541
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQ + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQFEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|410219744|gb|JAA07091.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Pan troglodytes]
gi|410247298|gb|JAA11616.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Pan troglodytes]
gi|410287530|gb|JAA22365.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Pan troglodytes]
gi|410358076|gb|JAA44592.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Pan troglodytes]
gi|410358084|gb|JAA44596.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Pan troglodytes]
Length = 633
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|395854094|ref|XP_003799533.1| PREDICTED: DNA repair protein XRCC1 isoform 1 [Otolemur
garnettii]
Length = 633
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|344268860|ref|XP_003406274.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein XRCC1-like
[Loxodonta africana]
Length = 631
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|348557594|ref|XP_003464604.1| PREDICTED: DNA repair protein XRCC1-like [Cavia porcellus]
Length = 632
Score = 68.2 bits (165), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKSISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN SAFVEV V S+
Sbjct: 61 GNNGSAFVEVLVGSSA 76
>gi|355729426|gb|AES09865.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Mustela putorius furo]
Length = 362
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDLTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|417412062|gb|JAA52446.1| Putative dna repair protein, partial [Desmodus rotundus]
Length = 636
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GE+ +LQL + QI+ +DI
Sbjct: 6 MPEIRLRHVVSCSSQDSTHCAENLLRADTYRKWRAAKAGERTISVVLQLEKEEQIHSVDI 65
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 66 GNDGSAFVEVLVGSSA 81
>gi|148692380|gb|EDL24327.1| X-ray repair complementing defective repair in Chinese hamster
cells 1, isoform CRA_a [Mus musculus]
Length = 509
Score = 67.8 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|74212227|dbj|BAE40272.1| unnamed protein product [Mus musculus]
Length = 631
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEISLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAF+EV V S+
Sbjct: 61 GNDGSAFLEVLVGSSA 76
>gi|297461990|ref|XP_874135.4| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein XRCC1 [Bos
taurus]
Length = 682
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D + A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|426243872|ref|XP_004015767.1| PREDICTED: DNA repair protein XRCC1 [Ovis aries]
Length = 598
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D + A+NLL ++ +KW+ GEK +LQL + QI+ +DI
Sbjct: 1 MLEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI 60
Query: 61 GNEFSAFVEVFVAKSS 76
GN+ SAFVEV V S+
Sbjct: 61 GNDGSAFVEVLVGSSA 76
>gi|55636599|ref|XP_508617.1| PREDICTED: DNA repair protein XRCC1-like isoform 6 [Pan
troglodytes]
Length = 179
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S +K W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRKPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|441645671|ref|XP_004090682.1| PREDICTED: LOW QUALITY PROTEIN: short transient receptor
potential channel 2-like [Nomascus leucogenys]
Length = 1242
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|403262154|ref|XP_003923460.1| PREDICTED: short transient receptor potential channel 2-like
[Saimiri boliviensis boliviensis]
Length = 1268
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|390470079|ref|XP_003734228.1| PREDICTED: LOW QUALITY PROTEIN: short transient receptor
potential channel 2-like [Callithrix jacchus]
Length = 1267
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPES-TKKW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPMRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNYGCAFLQIDVGRSSWPLD 82
>gi|395743195|ref|XP_003777888.1| PREDICTED: LOW QUALITY PROTEIN: short transient receptor
potential channel 2-like [Pongo abelii]
Length = 1176
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|114639128|ref|XP_001174359.1| PREDICTED: DNA repair protein XRCC1-like isoform 5 [Pan
troglodytes]
Length = 234
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S +K W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRKPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|426369583|ref|XP_004051765.1| PREDICTED: putative short transient receptor potential channel
2-like protein-like isoform 1 [Gorilla gorilla gorilla]
gi|426369585|ref|XP_004051766.1| PREDICTED: putative short transient receptor potential channel
2-like protein-like isoform 2 [Gorilla gorilla gorilla]
gi|426369587|ref|XP_004051767.1| PREDICTED: putative short transient receptor potential channel
2-like protein-like isoform 3 [Gorilla gorilla gorilla]
Length = 142
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|431898089|gb|ELK06792.1| Short transient receptor potential channel 2 [Pteropus alecto]
Length = 787
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVSYSS+DP + +NLLNP+S K W C Q A LQL V I+ I
Sbjct: 1 MAPVKISHVVSYSSQDPKYPVENLLNPDSQKGPWLSCPQDKSGQLKAELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|340719870|ref|XP_003398368.1| PREDICTED: hypothetical protein LOC100647983 [Bombus terrestris]
Length = 474
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
IKF +V+S SSE P + NLL S W+C GE A I QL+ I G+DIGN
Sbjct: 3 IKFTKVISCSSEHPSYPVSNLLQHRSNSSWRCAKPGEMLATVIFQLAESSCITGLDIGNY 62
Query: 64 FSAFVEVFVAKSSNPDDY 81
S V V + +S PD +
Sbjct: 63 RSCVVVVTASTASEPDTW 80
>gi|402894556|ref|XP_003910420.1| PREDICTED: LOW QUALITY PROTEIN: short transient receptor
potential channel 2-like [Papio anubis]
Length = 1313
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP++ ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPRYPVENLLNPDNPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|363729268|ref|XP_003640621.1| PREDICTED: short transient receptor potential channel 2-like
[Gallus gallus]
Length = 382
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKW-KCKSMGEKQAVAILQLSSQVQINGID 59
MAP+K + VVS+SS+DP + +NLL P+ + W C +Q LQL V I ID
Sbjct: 1 MAPVKISHVVSFSSQDPRYPVENLLCPDGRRPWLSCPQERSRQLKVELQLERAVPIGYID 60
Query: 60 IGNEFSAFVEVFVAKSSNPDD 80
+GN AF+++ V +SS P D
Sbjct: 61 VGNWGCAFLQIEVGRSSWPLD 81
>gi|390343848|ref|XP_789486.3| PREDICTED: uncharacterized protein LOC584533 [Strongylocentrotus
purpuratus]
Length = 973
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAI-LQLSSQVQINGID 59
MAP+K +VS+SS+D H A NLL ++W C +V + QL V+I ID
Sbjct: 1 MAPVKLKNIVSFSSQDADHCARNLLETNQWRRWLCAPGDRSGSVQVEFQLERAVKIGFID 60
Query: 60 IGNEFSAFVEVFVAKSSNPDD 80
IGN SA +E+ V +SS DD
Sbjct: 61 IGNYGSALIEILVRRSSASDD 81
>gi|355752426|gb|EHH56546.1| hypothetical protein EGM_05989 [Macaca fascicularis]
Length = 142
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP++ ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPRYPVENLLNPDNPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|149068668|gb|EDM18220.1| transient receptor potential cation channel, subfamily C, member
2, isoform CRA_a [Rattus norvegicus]
gi|149068669|gb|EDM18221.1| transient receptor potential cation channel, subfamily C, member
2, isoform CRA_a [Rattus norvegicus]
Length = 823
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S K W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHKGPWLSCPRDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|355566830|gb|EHH23209.1| hypothetical protein EGK_06637 [Macaca mulatta]
Length = 142
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP++ ++ W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPRYPVENLLNPDNPRRPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|300373580|gb|ADK02761.1| transient receptor potential cation channel subfamily C protein
[Zalophus californianus]
Length = 1111
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN SAF+++ V +SS
Sbjct: 61 DVGNCGSAFLQIDVGRSS 78
>gi|148684620|gb|EDL16567.1| transient receptor potential cation channel, subfamily C, member
2, isoform CRA_a [Mus musculus]
gi|148684621|gb|EDL16568.1| transient receptor potential cation channel, subfamily C, member
2, isoform CRA_a [Mus musculus]
Length = 824
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHRGPWLSCPQDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|357618347|gb|EHJ71366.1| hypothetical protein KGM_09668 [Danaus plexippus]
Length = 685
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPE-STKKWKCKSMGEKQAVAILQLSSQVQINGID 59
M +K VVS SSEDP + A+NLL+ E + KKW CK+ GE +LQL+ VQI I
Sbjct: 1 MPRVKIDYVVSMSSEDPENPANNLLSWEINKKKWLCKT-GETSCSVVLQLTKAVQIESIT 59
Query: 60 IGNEFSAFVEVFVAKSSNPDD 80
IG ++ +EV V S P++
Sbjct: 60 IGTYHTSMLEVLVGSSEKPNE 80
>gi|350415959|ref|XP_003490802.1| PREDICTED: DNA repair protein XRCC1-like [Bombus impatiens]
Length = 474
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
IKF +V+S SSE P + NLL S W+C GE A I QL+ I G+D+GN
Sbjct: 3 IKFTKVISCSSEHPSYPVSNLLQHRSHSSWRCAKPGEMLATVIFQLAESSCITGVDLGNY 62
Query: 64 FSAFVEVFVAKSSNPD 79
S V V + +S PD
Sbjct: 63 RSCVVVVTASTASEPD 78
>gi|194213487|ref|XP_001496635.2| PREDICTED: short transient receptor potential channel 2-like
[Equus caballus]
Length = 1262
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S K W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSQKGPWLSCPQDRSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|293344272|ref|XP_002725750.1| PREDICTED: short transient receptor potential channel 2 [Rattus
norvegicus]
gi|293356090|ref|XP_002728847.1| PREDICTED: short transient receptor potential channel 2 [Rattus
norvegicus]
Length = 1272
Score = 62.4 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S K W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHKGPWLSCPRDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|256084729|ref|XP_002578579.1| transient receptor potential channel 2 isoform 3 [Schistosoma
mansoni]
gi|360042704|emb|CCD78114.1| putative transient receptor potential channel 2 isoform 3
[Schistosoma mansoni]
Length = 636
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M + +RVVS++SED A NLL S KW C S G KQ L S V+I+ +DI
Sbjct: 1 MPEVVPSRVVSFTSEDKAFPASNLLKGSSFSKWCCISGGSKQEAVELSFSEPVEISRLDI 60
Query: 61 GNEFSAFVEVFV 72
GN SAF+EV V
Sbjct: 61 GNNGSAFIEVLV 72
>gi|256084731|ref|XP_002578580.1| transient receptor potential channel 2 isoform 3 [Schistosoma
mansoni]
gi|360042705|emb|CCD78115.1| putative transient receptor potential channel 2 isoform 3
[Schistosoma mansoni]
Length = 578
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 42/72 (58%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M + +RVVS++SED A NLL S KW C S G KQ L S V+I+ +DI
Sbjct: 1 MPEVVPSRVVSFTSEDKAFPASNLLKGSSFSKWCCISGGSKQEAVELSFSEPVEISRLDI 60
Query: 61 GNEFSAFVEVFV 72
GN SAF+EV V
Sbjct: 61 GNNGSAFIEVLV 72
>gi|154090945|ref|NP_035774.2| short transient receptor potential channel 2 isoform 1 [Mus
musculus]
gi|189442781|gb|AAI67191.1| Transient receptor potential cation channel, subfamily C, member
2 [synthetic construct]
Length = 1264
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHRGPWLSCPQDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|42495016|gb|AAS17747.1| transient receptor potential cation channel subfamily C member 2
long channel splice form [Mus musculus]
Length = 1119
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHRGPWLSCPQDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|444731485|gb|ELW71838.1| Short transient receptor potential channel 2 [Tupaia chinensis]
Length = 1253
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S K W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPRYPVENLLNPDSHKGPWLSCPQDRSGQLRVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|74722933|sp|Q6ZNB5.1|TRC2L_HUMAN RecName: Full=Putative short transient receptor potential channel
2-like protein; Short=TrpC2-like protein
gi|47077058|dbj|BAD18460.1| unnamed protein product [Homo sapiens]
Length = 142
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLGCPQDKSGQLKVELQLERAVPTGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V SS P D
Sbjct: 61 DVGNCGCAFLQIDVGHSSWPLD 82
>gi|119595212|gb|EAW74806.1| hCG1640299 [Homo sapiens]
Length = 179
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S ++ W C Q LQL V I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRRPWLGCPQDKSGQLKVELQLERAVPTGYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V SS P D
Sbjct: 61 DVGNCGCAFLQIDVGHSSWPLD 82
>gi|291384356|ref|XP_002708576.1| PREDICTED: short transient receptor potential channel 2 homolog
[Oryctolagus cuniculus]
Length = 1266
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP++ K W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDTQKGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|354495285|ref|XP_003509761.1| PREDICTED: short transient receptor potential channel 2
[Cricetulus griseus]
Length = 1192
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP++ + W C Q LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDNHRGPWLSCPRDKSGQLKVELQLERVVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|296479864|tpg|DAA21979.1| TPA: short transient receptor potential channel 2 homolog [Bos
taurus]
Length = 1262
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP++ + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVRISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|210032397|ref|NP_776902.2| short transient receptor potential channel 2 homolog [Bos taurus]
Length = 1262
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP++ + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVRISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|426245928|ref|XP_004016754.1| PREDICTED: short transient receptor potential channel 2-like
[Ovis aries]
Length = 1263
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP++ + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVRISHVVSFSSQDPRYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|26326251|dbj|BAC26869.1| unnamed protein product [Mus musculus]
Length = 261
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHRGPWLSCPQDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|359322352|ref|XP_534024.4| PREDICTED: short transient receptor potential channel 2-like
[Canis lupus familiaris]
Length = 1253
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSPRGPWLSCPQDKSGQLKVELQLERVVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|383848173|ref|XP_003699726.1| PREDICTED: DNA repair protein XRCC1-like [Megachile rotundata]
Length = 490
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
IK A+++S SSE + A NLL S W+C GE A I Q++ I G+DIGN
Sbjct: 3 IKLAKIISCSSEHASYPASNLLQHRSNSSWRCAKPGEMLATVIFQMAEPSCITGLDIGNY 62
Query: 64 FSAFVEVFVAKSSNPDDY 81
S V V + S+ PD++
Sbjct: 63 RSCVVVVTASMSTEPDNW 80
>gi|410054159|ref|XP_001156934.3| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein XRCC1 isoform 2
[Pan troglodytes]
Length = 742
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M I+ VVS SS+D H A+NLL ++ +KW+ GEK +LQL + QI+ +D
Sbjct: 115 MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDX 174
Query: 61 GNEFSAFV 68
GN+ SAFV
Sbjct: 175 GNDGSAFV 182
>gi|335294452|ref|XP_003129653.2| PREDICTED: short transient receptor potential channel 2-like [Sus
scrofa]
Length = 1258
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVANLLNPDSQRGPWLSCPRDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|410972762|ref|XP_003992825.1| PREDICTED: short transient receptor potential channel 2-like
[Felis catus]
Length = 1256
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + +VS+SS+DP + +NLLNP+ K W C Q LQL V I I
Sbjct: 1 MAPVKISHIVSFSSQDPKYPVENLLNPDCQKGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|344296844|ref|XP_003420112.1| PREDICTED: short transient receptor potential channel 2-like
[Loxodonta africana]
Length = 1253
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVANLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|348555297|ref|XP_003463460.1| PREDICTED: short transient receptor potential channel 2-like
[Cavia porcellus]
Length = 1288
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLL P+S + W C Q LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLTPDSQRGPWLSCPQDKSGQLKVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|260791124|ref|XP_002590590.1| hypothetical protein BRAFLDRAFT_123617 [Branchiostoma floridae]
gi|229275785|gb|EEN46601.1| hypothetical protein BRAFLDRAFT_123617 [Branchiostoma floridae]
Length = 590
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPE--STKKWKCKSMGEKQAV-AILQLSSQVQING 57
MAP+ VVSYSS+D VHK DNLL + S K+W C S + A LQL I
Sbjct: 1 MAPVVVKCVVSYSSQDSVHKVDNLLTAQGGSWKRWLCASDDRSGVMEAELQLDRAYHIGY 60
Query: 58 IDIGNEFSAFVEVFVAKSS 76
+DIGN SA+VE+ V +SS
Sbjct: 61 VDIGNCGSAYVELLVGRSS 79
>gi|328780633|ref|XP_003249834.1| PREDICTED: hypothetical protein LOC100577027 [Apis mellifera]
Length = 490
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
IK A+V+S SSE + NLL S W+C GE A I Q++ I G+DIGN
Sbjct: 3 IKLAKVISCSSEHLSYPVSNLLQHRSNSSWRCAKPGEMLATVIFQMAEPSCITGLDIGNY 62
Query: 64 FSAFVEVFVAKSSNPDDY 81
S V V + SS PD++
Sbjct: 63 RSCVVVVTASTSSEPDNW 80
>gi|301785239|ref|XP_002928032.1| PREDICTED: LOW QUALITY PROTEIN: short transient receptor
potential channel 2-like [Ailuropoda melanoleuca]
Length = 1261
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+ + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVNISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|197246092|gb|AAI69022.1| Trpc2 protein [Rattus norvegicus]
Length = 407
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+S K W C Q QL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDSHKGPWLSCPRDKTGQLKVEFQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF+++ V +SS P D
Sbjct: 61 DVGNCGCAFLQIDVGRSSWPLD 82
>gi|157743042|gb|AAI50096.1| TRPC2 protein [Bos taurus]
Length = 405
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP++ + VVS+SS+DP + +NLLNP+S + W C Q LQL V I I
Sbjct: 1 MAPVRISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|147906615|ref|NP_001087049.1| X-ray repair complementing defective repair in Chinese hamster
cells 1 [Xenopus laevis]
gi|50417738|gb|AAH77942.1| Xrcc1-prov protein [Xenopus laevis]
Length = 392
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAI-LQLSSQVQINGID 59
MAPI +VS+SS+DP H A+NLL+ S W S + + LQL I ID
Sbjct: 1 MAPITIKHIVSFSSQDPKHPAENLLSESSLLPWLISSRERSGCLRVELQLEKASHIAYID 60
Query: 60 IGNEFSAFVEVFVAKSSNPDD 80
IGN SA V++ V +SS P D
Sbjct: 61 IGNCGSALVQIDVGRSSWPLD 81
>gi|351698221|gb|EHB01140.1| Putative short transient receptor potential channel 2-like
protein, partial [Heterocephalus glaber]
Length = 124
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLN +S + W C Q LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNTDSQRGPWLGCPQDKSGQLKVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|395815832|ref|XP_003781421.1| PREDICTED: short transient receptor potential channel 2-like
[Otolemur garnettii]
Length = 1238
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEK--QAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLN S ++ S +K Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNTNSQRRPWLSSPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|307181235|gb|EFN68932.1| DNA-repair protein XRCC1 [Camponotus floridanus]
Length = 437
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 4 IKFARVVSYSSEDPVHKADNLL--NPESTK-KWKCKSMGEKQAVAILQLSSQVQINGIDI 60
+KF +++S SSE P + A NLL N E+ K W+C GE A I QL I G+DI
Sbjct: 3 VKFEKIISCSSEHPTYPAANLLQCNSENWKATWRCAKPGEMLAQVIFQLVEPSYITGVDI 62
Query: 61 GNEFSAFVEVFVAKSSNPDDY 81
GN S V V + SS PD++
Sbjct: 63 GNFQSCVVIVTGSTSSEPDNW 83
>gi|432106681|gb|ELK32334.1| Short transient receptor potential channel 2 [Myotis davidii]
Length = 479
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGI 58
MAP+K + VVS+SS+DP + +NLLNP+ + W C Q LQL V I I
Sbjct: 1 MAPVKISHVVSFSSQDPKYPVENLLNPDRQRGPWLSCPQDKSGQLKVELQLERAVPIGYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF+++ V +SS
Sbjct: 61 DVGNCGCAFLQIDVGRSS 78
>gi|391337298|ref|XP_003743007.1| PREDICTED: DNA repair protein XRCC1-like [Metaseiulus
occidentalis]
Length = 255
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLL--NPES--TKKWKCKSMGEKQAVAILQLSSQVQIN 56
M+ +K +VVS+SSE H + NLL P + +KW +S ++A +++L IN
Sbjct: 1 MSVLKLEKVVSFSSESKKHPSTNLLQGGPSNDLNRKWLAQSTTGEKAFVVIKLEGPSVIN 60
Query: 57 GIDIGNEFSAFVEVFVA 73
IDIGNE SA++EV V+
Sbjct: 61 AIDIGNEGSAYIEVLVS 77
>gi|395521318|ref|XP_003764765.1| PREDICTED: short transient receptor potential channel 2-like
[Sarcophilus harrisii]
Length = 1316
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNP-ESTKKWKCKSMGEKQAVAI-LQLSSQVQINGI 58
MAP+K + VVS+SS+D + +NLL+P E + W + + LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDSRYPVENLLDPNEPVRPWLSSPRDHSGQLKVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNP 78
D+GN AF++V V +SS P
Sbjct: 61 DVGNCGCAFLQVDVGRSSWP 80
>gi|321463814|gb|EFX74827.1| hypothetical protein DAPPUDRAFT_56716 [Daphnia pulex]
Length = 140
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 22 DNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVAKSSNPD-D 80
+NL+ +KW+CKS GE++A QL I+ +DIGN SAF+E+ V +S D D
Sbjct: 1 ENLIKDGVYRKWRCKSAGEQKAWVEFQLEKTSFISAVDIGNHGSAFIEILVGRSGCSDED 60
Query: 81 YK 82
YK
Sbjct: 61 YK 62
>gi|307194260|gb|EFN76656.1| DNA-repair protein XRCC1 [Harpegnathos saltator]
Length = 486
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTK---KWKCKSMGEKQAVAILQLSSQVQINGIDI 60
+ +++S SSE P + A NLL S K W+C GE A I +LS I G+DI
Sbjct: 3 VNLGKIISCSSEHPSYPAANLLERNSEKWKATWRCAKPGEMLAHVIFELSESSYITGVDI 62
Query: 61 GNEFSAFVEVFVAKSSNPDDY 81
GN S V V + +S PD++
Sbjct: 63 GNFQSCVVIVTASTASEPDNW 83
>gi|332019902|gb|EGI60363.1| DNA repair protein XRCC1 [Acromyrmex echinatior]
Length = 487
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 4 IKFARVVSYSSEDPVHKADNLL--NPESTK-KWKCKSMGEKQAVAILQLSSQVQINGIDI 60
+KF +++S SSE P A NLL N E+ K W+C GE A I QL+ I G+D+
Sbjct: 3 VKFEKIISCSSEHPKFPAANLLQRNSENWKATWRCSKPGEMLAHVIFQLAEPSYITGVDV 62
Query: 61 GNEFSAFVEVFVAKSSNPDDY 81
GN S V V + SS PD++
Sbjct: 63 GNYQSCVVIVTGSISSEPDNW 83
>gi|290782658|gb|ADD62437.1| XRCC1 N-terminal domain-related isoform 2 [Macropus eugenii]
Length = 271
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLN-PESTKKWKCKSMGEKQAVAI-LQLSSQVQINGI 58
MAP+K + VVS+SS+D H +NLL+ E K W + + LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDSRHPVENLLDSSEPMKPWLGSPQDHSGQLKVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF++V V +SS P D
Sbjct: 61 DVGNCGCAFLQVDVGRSSWPPD 82
>gi|324513517|gb|ADY45554.1| DNA repair protein XRCC1 [Ascaris suum]
Length = 423
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTK-KWKCKSMGEKQAVAILQLSSQVQINGID 59
M KF +VS S + ++A+NLL T+ KWK K+ G ++QL + I +D
Sbjct: 1 MPLAKFKFIVSSSDSEQGYEAENLLVDGRTRTKWKGKA-GAVNNCVVIQLDREHSITSVD 59
Query: 60 IGNEFSAFVEVFVAKS 75
IGNEFSA VE+ VAKS
Sbjct: 60 IGNEFSALVEILVAKS 75
>gi|301623852|ref|XP_002941233.1| PREDICTED: short transient receptor potential channel 2-like
[Xenopus (Silurana) tropicalis]
Length = 407
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAV-AILQLSSQVQINGID 59
MAPI +VS+SS+DP H +NLL+ S + W + A LQL I +D
Sbjct: 1 MAPITVRHIVSFSSQDPKHPVENLLSEISAQPWLISPRERGGHLRAELQLEKACHIAYVD 60
Query: 60 IGNEFSAFVEVFVAKSSNPDD 80
IGN SAF+++ V +SS P D
Sbjct: 61 IGNCGSAFLQIDVGRSSWPLD 81
>gi|290782656|gb|ADD62436.1| XRCC1 N-terminal domain-related isoform 1 [Macropus eugenii]
Length = 420
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLN-PESTKKWKCKSMGEKQAVAI-LQLSSQVQINGI 58
MAP+K + VVS+SS+D H +NLL+ E K W + + LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDSRHPVENLLDSSEPMKPWLGSPQDHSGQLKVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDD 80
D+GN AF++V V +SS P D
Sbjct: 61 DVGNCGCAFLQVDVGRSSWPPD 82
>gi|432910447|ref|XP_004078368.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein XRCC1-like
[Oryzias latipes]
Length = 608
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M IK VVS +SED HKADNLL+ ++ +KWK GEKQ ILQ+ +
Sbjct: 1 MPEIKLKHVVSCTSEDNTHKADNLLSSDTYRKWKAARAGEKQTSVILQVXFSFHTQDVPX 60
Query: 61 GNEFSAFVEVFVAKSS 76
F +V + SS
Sbjct: 61 ---FQKLFQVLLVTSS 73
>gi|322791348|gb|EFZ15835.1| hypothetical protein SINV_04644 [Solenopsis invicta]
Length = 457
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 4 IKFARVVSYSSEDPVHKADNLL--NPESTK-KWKCKSMGEKQAVAILQLSSQVQINGIDI 60
+K +++S SSE P + A NLL N E+ K W+C GE A I QL+ I G+DI
Sbjct: 3 VKLEKIISCSSEHPQYPAANLLQRNSENWKATWRCSKPGEMLAHVIFQLAEPSYITGVDI 62
Query: 61 GNEFSAFVEVFVAKSSNPDDY 81
GN S V V + S PD++
Sbjct: 63 GNYQSCVVIVTGSTSMEPDNW 83
>gi|156554771|ref|XP_001605823.1| PREDICTED: DNA repair protein XRCC1-like [Nasonia vitripennis]
Length = 480
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 4 IKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNE 63
IK ++++S SSE P + + NLL W+C E A I QL I G++IGN
Sbjct: 3 IKVSKIISCSSEHPSYPSSNLLEHPPKSSWRCAKPNELIATVIFQLLESSCITGLEIGNY 62
Query: 64 FSAFVEVFVAKSSNPDDY 81
S V V + S PD++
Sbjct: 63 RSCIVVVEASTSEEPDNW 80
>gi|291226159|ref|XP_002733062.1| PREDICTED: X-ray repair complementing defective repair in Chinese
hamster cells 1-like [Saccoglossus kowalevskii]
Length = 956
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 16 DPVHKADNLL-NPESTKKWKC-KSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVA 73
D VHKADNLL N S +KW C K A +L+ +I ID+GN SAFVE+ V
Sbjct: 264 DTVHKADNLLSNGSSWRKWLCAKDDRSGHLEAEFELNKVTKIGYIDVGNGGSAFVEILVG 323
Query: 74 KSSNP 78
+SS P
Sbjct: 324 RSSWP 328
>gi|391346924|ref|XP_003747715.1| PREDICTED: uncharacterized protein LOC100905014 [Metaseiulus
occidentalis]
Length = 651
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M P ++VS SSE P HK +L+ W +++GE++A L+L+ QI+ I+I
Sbjct: 1 MLPNPVEKIVSVSSEHPDHKVFSLIT--GFGSWTTENVGEEKAEIELKLTDLAQISRIEI 58
Query: 61 GNEFSAFVEVFVAKSSNPD 79
NE SA+V++ V++ PD
Sbjct: 59 ANESSAWVDIRVSREGIPD 77
>gi|156384944|ref|XP_001633392.1| predicted protein [Nematostella vectensis]
gi|156220461|gb|EDO41329.1| predicted protein [Nematostella vectensis]
Length = 199
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 1 MAPIKFARVVSYSSEDPVH-KADNLLNPE---STKKWKCKSMGE-KQAVAILQLSSQVQI 55
MAP+ VV +SS+D K +NLL + S +W C G Q A QL +I
Sbjct: 1 MAPLLLKHVVRFSSQDSTSGKVENLLKSQTVPSAGRWTCSKEGCCDQLEAEFQLERASRI 60
Query: 56 NGIDIGNEFSAFVEVFVAKS 75
+ +DIGN SAFVEV V S
Sbjct: 61 SHVDIGNYGSAFVEVLVGNS 80
>gi|334327865|ref|XP_003341011.1| PREDICTED: short transient receptor potential channel 2-like
[Monodelphis domestica]
Length = 1225
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLN-PESTKKWKCKSMGEKQAVAI-LQLSSQVQINGI 58
MAP+K + VVS+SS+D + +NLL+ E + W + + LQL V I+ I
Sbjct: 1 MAPVKISHVVSFSSQDSRYPVENLLDLNEPIRPWLSSPRDHSGQLRVELQLERAVPISYI 60
Query: 59 DIGNEFSAFVEVFVAKSS 76
D+GN AF++V V +SS
Sbjct: 61 DVGNCGCAFLQVDVGRSS 78
>gi|397489583|ref|XP_003815804.1| PREDICTED: DNA repair protein XRCC1-like [Pan paniscus]
Length = 211
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 14 SEDPVHKADNLLNPESTKK-W-KCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVF 71
++DP + +NLLNP+S +K W C Q LQL V I ID+GN AF+++
Sbjct: 45 AKDPKYPVENLLNPDSPRKPWLSCPQDKSGQLKVELQLERAVPIGYIDVGNCGCAFLQID 104
Query: 72 VAKSSNPDD 80
V +SS P D
Sbjct: 105 VGRSSWPLD 113
>gi|62955261|ref|NP_001017642.1| uncharacterized protein LOC550335 [Danio rerio]
gi|62204829|gb|AAH92807.1| Zgc:110224 [Danio rerio]
gi|182890484|gb|AAI64497.1| Zgc:110224 protein [Danio rerio]
Length = 403
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLN-PESTKKWKCKSMGEKQAVAI-LQLSSQVQINGI 58
MAP+K +VS++S+D + NL + +S++ W C + + LQ+ I I
Sbjct: 1 MAPVKIKHIVSFTSQDSRNGVCNLCDGSDSSRPWLCSVQDRTGVLRVELQMEKVSAIGFI 60
Query: 59 DIGNEFSAFVEVFVAKSSNPDDY 81
D+GN SAF++V V +SS D+
Sbjct: 61 DVGNYGSAFIQVDVGRSSWSSDH 83
>gi|328875440|gb|EGG23804.1| BRCT domain-containing protein [Dictyostelium fasciculatum]
Length = 759
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 7 ARVVSYSSEDPVHKADNLLNPESTKKWKC-KSMGEKQAVAILQLSSQVQINGIDIGNEFS 65
A +V+ SSE ++KA N+L ++ + W+ + +GE A ++Q + I IDIGN S
Sbjct: 25 ASIVTCSSESDINKATNVLVEDTYRTWQTNEKVGE--ASIVIQFAQPTVIKAIDIGNAGS 82
Query: 66 AFVEVFVAKSS 76
AF+EV V S+
Sbjct: 83 AFIEVLVGYSN 93
>gi|440791093|gb|ELR12347.1| BRCA1 C Terminus (BRCT) domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 773
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 9 VVSYSSEDP-VHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAF 67
++S +S+D H A + +P +T W+ ++ EK+A L L++ VQI I IGN +AF
Sbjct: 12 ILSCTSQDSESHPATAVKSPTATTYWQTQA-PEKKAALELALATPVQIQRIVIGNAGAAF 70
Query: 68 VEVFVAKS-SNPDDYK 82
VE+ V KS S P DY+
Sbjct: 71 VEILVGKSTSRPIDYQ 86
>gi|349802671|gb|AEQ16808.1| putative dna repair protein xrcc1 [Pipa carvalhoi]
Length = 109
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 25 LNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVAKSSN 77
L ++ +KWK + EKQ ILQ + Q++ IDIGNE SAFVEV V S++
Sbjct: 1 LKADTYRKWKA-NKPEKQISVILQFKEE-QVHSIDIGNEGSAFVEVLVGHSTS 51
>gi|242011355|ref|XP_002426418.1| DNA-repair protein XRCC1, putative [Pediculus humanus corporis]
gi|212510517|gb|EEB13680.1| DNA-repair protein XRCC1, putative [Pediculus humanus corporis]
Length = 639
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 19 HKADNLLNPE--STKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVAKSS 76
H A NLL E K W C+ K A+ I+QL + I +GN SAFVE+ V K++
Sbjct: 19 HPAKNLLGGEIRPNKNWLCEKGSNKGAI-IIQLKKAAILTSIHVGNAHSAFVEILVGKAA 77
Query: 77 NPDDY 81
+ D+
Sbjct: 78 DVTDH 82
>gi|339249980|ref|XP_003373975.1| putative DNA-repair protein XRCC1 [Trichinella spiralis]
gi|316969802|gb|EFV53847.1| putative DNA-repair protein XRCC1 [Trichinella spiralis]
Length = 455
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 42 QAVAILQLSSQVQINGIDIGNEFSAFVEVFVAKSSNPDDYK 82
+AVAI+QL +I+GIDI N+ SAF+E+ VA+S DD++
Sbjct: 24 KAVAIIQLKQLERIDGIDIRNQNSAFIEIHVARSD--DDFR 62
>gi|320165831|gb|EFW42730.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 830
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDI 60
M+ +KF VV++SSED + ADN+L+ + K WK + + I L + + I
Sbjct: 1 MSQLKFQSVVTFSSEDGPNLADNILSSDRHKAWKGVAGASSHTIEI-DLDRASIVQSVVI 59
Query: 61 GNEFSAFVEVFVAK----SSNP 78
GN SA +E+ VA+ ++NP
Sbjct: 60 GNAGSAMIELQVARRGELAANP 81
>gi|281353809|gb|EFB29393.1| hypothetical protein PANDA_017917 [Ailuropoda melanoleuca]
Length = 102
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 16 DPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVA 73
DP + +NLLNP+S + W C Q LQL V I ID+GN AF+++ V
Sbjct: 1 DPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYIDVGNCGCAFLQIDVG 60
Query: 74 KSS 76
+SS
Sbjct: 61 RSS 63
>gi|449280538|gb|EMC87815.1| Putative short transient receptor potential channel 2-like
protein, partial [Columba livia]
Length = 51
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAI-LQL 49
MAP+K + VVS+SS+DP +NLL + + W C Q + + LQL
Sbjct: 1 MAPVKISYVVSFSSQDPKFPVENLLREDEPRPWLCCPRDRSQRLHVELQL 50
>gi|281210805|gb|EFA84971.1| BRCT domain-containing protein [Polysphondylium pallidum PN500]
Length = 833
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 7 ARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSA 66
A V SSE VHKA+N L ++ + W+ + + AV Q S I IDI N +
Sbjct: 15 ASVTYCSSEGEVHKANNTLLGDTYRVWQTAELTD-LAVIEYQFSEPRYIKAIDITNAGCS 73
Query: 67 FVEVFVAKSS 76
F+EV V S+
Sbjct: 74 FIEVLVGYST 83
>gi|344240178|gb|EGV96281.1| Nuclear mitotic apparatus protein 1 [Cricetulus griseus]
Length = 3026
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 15 EDPVHKADNLLNPESTK-KW-KCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFV 72
+DP + +NLLNP++ + W C Q LQL V I+ ID+GN AF+++ V
Sbjct: 1924 KDPKYPVENLLNPDNHRGPWLSCPRDKSGQLKVELQLERVVPISYIDVGNCGCAFLQIDV 1983
Query: 73 AKSSNPDD 80
+SS P D
Sbjct: 1984 GRSSWPLD 1991
>gi|198428361|ref|XP_002124348.1| PREDICTED: similar to XRCC1 protein [Ciona intestinalis]
Length = 445
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 1 MAPIKFARVVSYSSEDPVHKADNLLNPESTKKWKCKSMGEK-QAVAILQLSSQVQINGID 59
MAPI+ V+ SSED + A NL+N KW S + A LQ S QI+ +D
Sbjct: 1 MAPIQIKEVIGVSSEDATYLATNLING---NKWMTNSKDQNVDADVELQFESLSQIDFLD 57
Query: 60 IGNEFSAFVEVFV 72
IG + +EV V
Sbjct: 58 IGYFNVSSLEVLV 70
>gi|313212230|emb|CBY36239.1| unnamed protein product [Oikopleura dioica]
Length = 961
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 1 MAPIKFARVVSYSSE-DPVHKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGID 59
M+ I+++ ++ S+E P A+NL++ + W + +++ L+L + I ID
Sbjct: 1 MSEIEYSEILDRSNEVAPKFPAENLIDFRRRQAWLI-PLSDREGHVELKLKKECVIQAID 59
Query: 60 IGNEFSAFVEVFVAKSSNPDDY 81
IGN SA E+ V + P+ +
Sbjct: 60 IGNAGSATFEIEVGHENEPNQW 81
>gi|47216318|emb|CAG03355.1| unnamed protein product [Tetraodon nigroviridis]
Length = 155
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 52 QVQINGIDIGNEFSAFVEVFVAKSS 76
+ QI+ IDIGNE SAF+E+ V SS
Sbjct: 5 EAQIHSIDIGNEGSAFIEILVGNSS 29
>gi|330801938|ref|XP_003288979.1| hypothetical protein DICPUDRAFT_79761 [Dictyostelium purpureum]
gi|325080956|gb|EGC34490.1| hypothetical protein DICPUDRAFT_79761 [Dictyostelium purpureum]
Length = 794
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 19 HKADNLLNPESTKKWKCKSMGEKQAVAILQLSSQVQINGIDIGNEFSAFVEVFVA 73
+K+ N+L ++ + W+ K +K + LQ S QI I+I N SAF+E+ V
Sbjct: 32 YKSINVLVEDTYRVWQTKDKTDKAYIE-LQFPSPTQIKQIEITNGGSAFIEILVG 85
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.127 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,159,488,232
Number of Sequences: 23463169
Number of extensions: 32782974
Number of successful extensions: 57710
Number of sequences better than 100.0: 178
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 57472
Number of HSP's gapped (non-prelim): 183
length of query: 82
length of database: 8,064,228,071
effective HSP length: 53
effective length of query: 29
effective length of database: 6,820,680,114
effective search space: 197799723306
effective search space used: 197799723306
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)