Query psy12992
Match_columns 319
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Fri Aug 16 16:22:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12992.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12992hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtt1 f.23.34.1 (T:1-30) Pho 62.3 2.8 0.0002 26.0 2.7 15 157-171 6-20 (30)
2 d1v7fa_ g.3.6.2 (A:) Phrixotox 49.7 1.9 0.00014 26.7 0.3 7 103-109 3-9 (29)
3 d1fftb2 f.17.2.1 (B:27-117) Cy 44.7 3.5 0.00025 28.3 1.1 31 152-182 20-50 (91)
4 d1oede_ f.36.1.1 (E:) Acetylch 32.6 19 0.0014 26.3 3.7 22 151-172 231-252 (260)
5 d1oedc_ f.36.1.1 (C:) Acetylch 30.2 22 0.0016 25.6 3.7 16 157-172 237-252 (260)
6 d1pw4a_ f.38.1.1 (A:) Glycerol 23.0 31 0.0022 24.4 3.2 28 153-180 412-440 (447)
7 d1vcla2 b.42.2.1 (A:151-283) H 21.5 12 0.00088 24.8 0.6 14 95-108 118-132 (133)
8 d2bs2c1 f.21.2.1 (C:1-254) Fum 20.0 36 0.0026 26.7 3.3 22 155-176 218-239 (254)
9 d1oeda_ f.36.1.1 (A:) Acetylch 19.8 45 0.0033 23.9 3.7 25 151-175 198-222 (227)
10 d1xrda1 f.3.1.1 (A:1-52) Light 16.9 57 0.0041 21.7 3.3 29 151-179 11-39 (52)
No 1
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=62.30 E-value=2.8 Score=26.00 Aligned_cols=15 Identities=47% Similarity=1.030 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHh
Q psy12992 157 FIVIFLLLILLFFFI 171 (319)
Q Consensus 157 fiviflllillfffi 171 (319)
++.||..+|.||||.
T Consensus 6 yv~ifac~i~lfffa 20 (30)
T d2axtt1 6 YVFIFACIIALFFFA 20 (30)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 345677777777764
No 2
>d1v7fa_ g.3.6.2 (A:) Phrixotoxin 1 (PaTX1) {Chilean copper tarantula (Phrixotrichus auratus) [TaxId: 269635]}
Probab=49.66 E-value=1.9 Score=26.71 Aligned_cols=7 Identities=71% Similarity=1.688 Sum_probs=5.9
Q ss_pred ccccccc
Q psy12992 103 QKWMWHK 109 (319)
Q Consensus 103 qkwmwhk 109 (319)
|||||.-
T Consensus 3 qkwmwtc 9 (29)
T d1v7fa_ 3 QKWMWTC 9 (29)
T ss_dssp BCTTCBC
T ss_pred hhheeec
Confidence 8999964
No 3
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=44.67 E-value=3.5 Score=28.33 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcccCCc
Q psy12992 152 RVFFLFIVIFLLLILLFFFIGLEQRRKNDNK 182 (319)
Q Consensus 152 rvfflfiviflllillfffigleqrrkndnk 182 (319)
.+|++.++||++...+++++-..-|++++++
T Consensus 20 ~~~~i~~iv~v~V~~~~~~~~~ryR~~~~~~ 50 (91)
T d1fftb2 20 TAFGLMLIVVIPAILMAVGFAWKYRASNKDA 50 (91)
T ss_dssp HHHHHTTTTTTHHHHHHHTTTTTTTTSTTTC
T ss_pred HHHHHHHHHHHHHHHHHHhhheeeeccCCcc
Confidence 4455666666666667777777777665443
No 4
>d1oede_ f.36.1.1 (E:) Acetylcholine receptor protein, gamma chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=32.59 E-value=19 Score=26.26 Aligned_cols=22 Identities=23% Similarity=0.638 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q psy12992 151 RRVFFLFIVIFLLLILLFFFIG 172 (319)
Q Consensus 151 rrvfflfiviflllillfffig 172 (319)
|-.|++|+++|++..+.+|+.+
T Consensus 231 R~~l~vF~~~~~i~t~~i~l~~ 252 (260)
T d1oede_ 231 KACFWIALLLFSIGTLAIFLTG 252 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3334445555555444444444
No 5
>d1oedc_ f.36.1.1 (C:) Acetylcholine receptor protein, delta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=30.24 E-value=22 Score=25.57 Aligned_cols=16 Identities=19% Similarity=0.544 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHhh
Q psy12992 157 FIVIFLLLILLFFFIG 172 (319)
Q Consensus 157 fiviflllillfffig 172 (319)
|+++|++..+..|+.+
T Consensus 237 F~i~~vi~ti~ifl~~ 252 (260)
T d1oedc_ 237 ITPVMVLGTIFIFVMG 252 (260)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 3333333233334444
No 6
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=23.03 E-value=31 Score=24.44 Aligned_cols=28 Identities=32% Similarity=0.375 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHH-HHHHHHhhhhhhcccC
Q psy12992 153 VFFLFIVIFLLL-ILLFFFIGLEQRRKND 180 (319)
Q Consensus 153 vfflfiviflll-illfffigleqrrknd 180 (319)
+|++++++.++. ++++++.--+.||+.+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 440 (447)
T d1pw4a_ 412 GFMVMIGGSILAVILLIVVMIGEKRRHEQ 440 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 344444333333 3333444444444443
No 7
>d1vcla2 b.42.2.1 (A:151-283) Hemolytic lectin CEL-III, domains 1 and 2 {Cucumaria echinata [TaxId: 40245]}
Probab=21.45 E-value=12 Score=24.83 Aligned_cols=14 Identities=43% Similarity=1.355 Sum_probs=11.6
Q ss_pred ccccC-Ccccccccc
Q psy12992 95 AWQCN-SPKQKWMWH 108 (319)
Q Consensus 95 awqcn-spkqkwmwh 108 (319)
.|.|+ +|.|+|-|.
T Consensus 118 ~~~c~~~~~Q~W~f~ 132 (133)
T d1vcla2 118 TWQCDGLPDQRFKWV 132 (133)
T ss_dssp EECCCCCGGGCEEEE
T ss_pred EEcCCCCHHhCEEEe
Confidence 58895 799999885
No 8
>d2bs2c1 f.21.2.1 (C:1-254) Fumarate reductase respiratory complex cytochrome b subunit, FrdC {Wolinella succinogenes [TaxId: 844]}
Probab=20.05 E-value=36 Score=26.69 Aligned_cols=22 Identities=36% Similarity=0.384 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhh
Q psy12992 155 FLFIVIFLLLILLFFFIGLEQR 176 (319)
Q Consensus 155 flfiviflllillfffigleqr 176 (319)
.+|++|-++.++.|.++|.|.-
T Consensus 218 ~~~i~lG~~sl~~fv~~G~e~~ 239 (254)
T d2bs2c1 218 AFLIVLGLLTFGAYVKKGLEQT 239 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCcccc
Confidence 3456677777888999999854
No 9
>d1oeda_ f.36.1.1 (A:) Acetylcholine receptor protein, alpha chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=19.83 E-value=45 Score=23.94 Aligned_cols=25 Identities=16% Similarity=0.269 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh
Q psy12992 151 RRVFFLFIVIFLLLILLFFFIGLEQ 175 (319)
Q Consensus 151 rrvfflfiviflllillfffigleq 175 (319)
|-.|++|+++|++..+.+|.--|.+
T Consensus 198 Ri~~~~F~l~~ii~~i~if~~~~~~ 222 (227)
T d1oeda_ 198 HILLCVFMLICIIGTVSVFAGRLIE 222 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
No 10
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=16.93 E-value=57 Score=21.73 Aligned_cols=29 Identities=31% Similarity=0.466 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccc
Q psy12992 151 RRVFFLFIVIFLLLILLFFFIGLEQRRKN 179 (319)
Q Consensus 151 rrvfflfiviflllillfffigleqrrkn 179 (319)
||++....|.+.+|.++.=||-|..-|-|
T Consensus 11 Rr~lva~~~fL~~LAl~IHfiLLSt~rfN 39 (52)
T d1xrda1 11 RQALVGLATFLFVLALLIHFILLSTERFN 39 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCccc
Done!