Your job contains 1 sequence.
>psy12993
MTLSKAVEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVL
CVLETSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQ
KIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLV
KLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNIDNIQ
EGK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12993
(243 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038934 - symbol:Gld2 species:7227 "Drosophila mel... 397 1.6e-35 1
FB|FBgn0260780 - symbol:wisp "wispy" species:7227 "Drosop... 357 5.3e-32 2
UNIPROTKB|F1RF43 - symbol:PAPD4 "Uncharacterized protein"... 306 4.6e-29 2
UNIPROTKB|Q6PIY7 - symbol:PAPD4 "Poly(A) RNA polymerase G... 305 6.1e-29 2
UNIPROTKB|Q2HJ44 - symbol:PAPD4 "Poly(A) RNA polymerase G... 306 5.7e-27 1
ZFIN|ZDB-GENE-050522-536 - symbol:papd4 "PAP associated d... 301 2.2e-26 1
UNIPROTKB|E2RQN5 - symbol:PAPD4 "Uncharacterized protein"... 300 2.6e-26 1
MGI|MGI:2140950 - symbol:Papd4 "PAP associated domain con... 296 7.8e-26 1
RGD|1306438 - symbol:Papd4 "PAP associated domain contain... 295 1.0e-25 1
WB|WBGene00009284 - symbol:F31C3.2 species:6239 "Caenorha... 259 1.2e-25 2
WB|WBGene00001596 - symbol:gld-2 species:6239 "Caenorhabd... 300 2.5e-25 1
UNIPROTKB|O17087 - symbol:gld-2 "Poly(A) RNA polymerase g... 300 2.5e-25 1
UNIPROTKB|Q641A1 - symbol:papd4-a "Poly(A) RNA polymerase... 291 3.7e-25 1
TAIR|locus:2063937 - symbol:HESO1 "HEN1 suppressor 1" spe... 220 2.3e-17 1
MGI|MGI:2445126 - symbol:Zcchc11 "zinc finger, CCHC domai... 177 2.7e-17 2
TAIR|locus:2043669 - symbol:AT2G45620 species:3702 "Arabi... 220 5.0e-17 1
UNIPROTKB|I3L9X5 - symbol:ZCCHC11 "Uncharacterized protei... 177 5.1e-17 2
UNIPROTKB|E9PKY2 - symbol:ZCCHC11 "Terminal uridylyltrans... 177 6.9e-17 2
UNIPROTKB|F1S6H9 - symbol:ZCCHC11 "Uncharacterized protei... 177 7.4e-17 2
UNIPROTKB|F1PFM0 - symbol:ZCCHC11 "Uncharacterized protei... 177 1.4e-16 2
UNIPROTKB|Q5TAX3 - symbol:ZCCHC11 "Terminal uridylyltrans... 177 1.5e-16 2
UNIPROTKB|J9P9X1 - symbol:ZCCHC11 "Uncharacterized protei... 177 1.5e-16 2
UNIPROTKB|F1MCY7 - symbol:ZCCHC11 "Uncharacterized protei... 177 5.0e-16 2
POMBASE|SPAC821.04c - symbol:cid13 "poly(A) polymerase Ci... 208 6.0e-16 1
DICTYBASE|DDB_G0281431 - symbol:DDB_G0281431 "Terminal ur... 211 6.1e-16 1
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 215 8.1e-16 1
UNIPROTKB|F1MSM5 - symbol:MTPAP "Uncharacterized protein"... 189 1.3e-15 2
MGI|MGI:1914690 - symbol:Mtpap "mitochondrial poly(A) pol... 190 2.0e-15 2
RGD|1310900 - symbol:Mtpap "mitochondrial poly(A) polymer... 189 2.6e-15 2
UNIPROTKB|E2RCU9 - symbol:MTPAP "Uncharacterized protein"... 186 2.7e-15 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 209 3.2e-15 1
POMBASE|SPBC1685.06 - symbol:cid11 "poly(A) polymerase Ci... 198 4.8e-15 1
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 210 5.3e-15 1
TAIR|locus:2102709 - symbol:AT3G45750 "AT3G45750" species... 197 1.2e-14 1
RGD|1586015 - symbol:Zcchc6 "zinc finger, CCHC domain con... 198 2.8e-14 1
UNIPROTKB|E1C833 - symbol:PAPD4 "Uncharacterized protein"... 191 3.0e-14 1
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 198 3.2e-14 1
UNIPROTKB|Q2KEW4 - symbol:MGCH7_ch7g922 "Putative unchara... 197 3.6e-14 1
UNIPROTKB|Q9NVV4 - symbol:MTPAP "Poly(A) RNA polymerase, ... 191 4.1e-14 1
DICTYBASE|DDB_G0278425 - symbol:DDB_G0278425 species:4468... 192 8.3e-14 1
TAIR|locus:2102714 - symbol:AT3G45760 species:3702 "Arabi... 186 9.5e-14 1
WB|WBGene00003499 - symbol:mut-2 species:6239 "Caenorhabd... 174 9.7e-14 2
UNIPROTKB|F1NYJ2 - symbol:LOC100857368 "Uncharacterized p... 192 1.1e-13 1
POMBASE|SPAC19D5.03 - symbol:cid1 "poly(A) polymerase Cid... 184 1.1e-13 1
UNIPROTKB|F1NJM6 - symbol:LOC100857368 "Uncharacterized p... 192 1.2e-13 1
MGI|MGI:2387179 - symbol:Zcchc6 "zinc finger, CCHC domain... 190 2.0e-13 1
UNIPROTKB|F1S4J1 - symbol:ZCCHC6 "Uncharacterized protein... 190 2.0e-13 1
UNIPROTKB|F1NBW0 - symbol:MTPAP "Uncharacterized protein"... 176 2.5e-13 2
UNIPROTKB|Q5VYS8 - symbol:ZCCHC6 "Terminal uridylyltransf... 188 3.3e-13 1
UNIPROTKB|E2RM29 - symbol:ZCCHC6 "Uncharacterized protein... 187 4.2e-13 1
UNIPROTKB|K7GM92 - symbol:ZCCHC6 "Uncharacterized protein... 187 4.2e-13 1
UNIPROTKB|E1BAR2 - symbol:ZCCHC6 "Uncharacterized protein... 187 4.2e-13 1
UNIPROTKB|J9P044 - symbol:ZCCHC6 "Uncharacterized protein... 187 4.4e-13 1
UNIPROTKB|E1C6A7 - symbol:ZCCHC11 "Uncharacterized protei... 179 3.2e-12 1
WB|WBGene00019629 - symbol:cid-1 species:6239 "Caenorhabd... 178 3.6e-12 1
ZFIN|ZDB-GENE-050706-68 - symbol:tut1 "terminal uridylyl ... 171 5.6e-12 2
WB|WBGene00019628 - symbol:pup-2 species:6239 "Caenorhabd... 174 1.5e-11 1
MGI|MGI:1917294 - symbol:Tut1 "terminal uridylyl transfer... 158 2.1e-09 2
UNIPROTKB|F1RPX0 - symbol:TUT1 "Uncharacterized protein" ... 162 2.3e-09 1
UNIPROTKB|H3BRB1 - symbol:MIR3654 "Protein MIR3654" speci... 159 2.6e-09 1
UNIPROTKB|F1MG03 - symbol:TUT1 "Speckle targeted PIP5K1A-... 161 3.0e-09 1
UNIPROTKB|Q1JPD6 - symbol:TUT1 "Speckle targeted PIP5K1A-... 161 3.0e-09 1
POMBASE|SPAC17H9.01 - symbol:cid16 "poly(A) polymerase Ci... 161 3.4e-09 2
UNIPROTKB|D2HS90 - symbol:TUT1 "Speckle targeted PIP5K1A-... 159 5.5e-09 1
UNIPROTKB|Q9H6E5 - symbol:TUT1 "Speckle targeted PIP5K1A-... 159 5.6e-09 1
UNIPROTKB|F5H0R1 - symbol:TUT1 "Speckle targeted PIP5K1A-... 159 5.9e-09 1
UNIPROTKB|E2R634 - symbol:TUT1 "Uncharacterized protein" ... 158 7.4e-09 1
UNIPROTKB|F6X6U9 - symbol:MIR3654 "Uncharacterized protei... 158 9.3e-09 2
UNIPROTKB|A9JTS5 - symbol:tut1 "Speckle targeted PIP5K1A-... 157 9.6e-09 1
RGD|1561043 - symbol:Tut1 "terminal uridylyl transferase ... 158 1.1e-08 2
DICTYBASE|DDB_G0271962 - symbol:DDB_G0271962 species:4468... 143 2.1e-07 1
UNIPROTKB|E9PKX1 - symbol:ZCCHC11 "Terminal uridylyltrans... 143 5.4e-07 1
FB|FBgn0039251 - symbol:Trf4-2 species:7227 "Drosophila m... 118 0.00014 1
UNIPROTKB|E2RJX8 - symbol:PAPD7 "Uncharacterized protein"... 119 0.00017 1
WB|WBGene00014115 - symbol:gld-4 species:6239 "Caenorhabd... 118 0.00039 1
UNIPROTKB|E1BEH2 - symbol:PAPD7 "Uncharacterized protein"... 115 0.00048 1
UNIPROTKB|F1S0S9 - symbol:PAPD7 "Uncharacterized protein"... 115 0.00048 1
RGD|1307356 - symbol:Papd7 "PAP associated domain contain... 115 0.00048 1
UNIPROTKB|Q5XG87 - symbol:PAPD7 "DNA polymerase sigma" sp... 115 0.00048 1
MGI|MGI:2682295 - symbol:Papd7 "PAP associated domain con... 115 0.00048 1
DICTYBASE|DDB_G0295737 - symbol:DDB_G0295737 "PAP/25A-ass... 116 0.00075 1
UNIPROTKB|F1NJM3 - symbol:PAPD7 "Uncharacterized protein"... 110 0.0010 1
>FB|FBgn0038934 [details] [associations]
symbol:Gld2 species:7227 "Drosophila melanogaster"
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007616 "long-term
memory" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IDA]
Pfam:PF03828 EMBL:AE014297 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0046872 GO:GO:0006397 GO:GO:0043005
GO:GO:0007616 GO:GO:0003723 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 EMBL:AY122076 EMBL:BT044483
RefSeq:NP_651012.2 ProteinModelPortal:Q9VD44 SMR:Q9VD44
IntAct:Q9VD44 MINT:MINT-1691551 STRING:Q9VD44
EnsemblMetazoa:FBtr0305038 EnsemblMetazoa:FBtr0310204 GeneID:42602
KEGG:dme:Dmel_CG5732 UCSC:CG5732-RA CTD:42602 FlyBase:FBgn0038934
GeneTree:ENSGT00550000074490 InParanoid:Q9VD44 KO:K14079
OMA:RYWREFF OrthoDB:EOG40GB69 PhylomeDB:Q9VD44 GenomeRNAi:42602
NextBio:829642 Bgee:Q9VD44 Uniprot:Q9VD44
Length = 1364
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 74/109 (67%), Positives = 87/109 (79%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+F+ +LI A+VPIL+F D K+EVD+N NN VG+RNTHLLYCY+Q+DWR+RP+ L VK
Sbjct: 1028 MFQDFNLIEARVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQLDWRVRPMALTVK 1087
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKF 230
WAQ HNIN+AKNMTISSYS LMVIHFLQ G SPPVLP L YP KF
Sbjct: 1088 QWAQYHNINNAKNMTISSYSLMLMVIHFLQVGASPPVLPCLHNLYPEKF 1136
Score = 198 (74.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 44/100 (44%), Positives = 67/100 (67%)
Query: 23 LFVVGSTMTGFGLDSSDVDMCL--GIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKADL 80
L++VGS+++ FG SD+D+C+ P R +A+ L V++ ++ +F+ +L
Sbjct: 977 LYLVGSSISYFGSKCSDMDICMLACTNPNIDSRMEAVYHLHVMK--ELLGRTNMFQDFNL 1034
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQ 120
I A+VPIL+F D K+EVD+N NN VG+RNTHLLYCY+Q
Sbjct: 1035 IEARVPILRFTDRCHKVEVDINFNNSVGIRNTHLLYCYSQ 1074
>FB|FBgn0260780 [details] [associations]
symbol:wisp "wispy" species:7227 "Drosophila melanogaster"
[GO:0007017 "microtubule-based process" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0035046
"pronuclear migration" evidence=IMP] [GO:0007344 "pronuclear
fusion" evidence=IMP] [GO:0035044 "sperm aster formation"
evidence=IMP] [GO:0007056 "spindle assembly involved in female
meiosis" evidence=IMP] [GO:0007343 "egg activation" evidence=IMP]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS;IDA] [GO:0006378 "mRNA polyadenylation" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0002805 "regulation of
antimicrobial peptide biosynthetic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0035046 GO:GO:0005737
GO:GO:0007052 GO:GO:0046872 EMBL:AE014298 GO:GO:0006378
GO:GO:0003723 GO:GO:0001556 GO:GO:0008298 GO:GO:0002805
GO:GO:0007344 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0007343 GeneTree:ENSGT00550000074490 KO:K14079
RefSeq:NP_572766.1 UniGene:Dm.6637 ProteinModelPortal:Q9VYS4
SMR:Q9VYS4 IntAct:Q9VYS4 MINT:MINT-300598 STRING:Q9VYS4
PRIDE:Q9VYS4 EnsemblMetazoa:FBtr0073573 GeneID:32152
KEGG:dme:Dmel_CG15737 UCSC:CG15737-RA CTD:32152 FlyBase:FBgn0260780
InParanoid:Q9VYS4 OMA:DSSDIDM OrthoDB:EOG4S7H5K PhylomeDB:Q9VYS4
GenomeRNAi:32152 NextBio:777126 Bgee:Q9VYS4 GO:GO:0035044
GO:GO:0007056 Uniprot:Q9VYS4
Length = 1373
Score = 357 (130.7 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 69/110 (62%), Positives = 86/110 (78%)
Query: 121 KIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLV 180
++F+ +LI A+VPIL+F+D S +EVDLN NN VG++NT+LL YAQMDWR RPLV++V
Sbjct: 1076 EVFQDFNLIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVIV 1135
Query: 181 KLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKF 230
KLWAQ H+INDAK MTISSYS LMV+H+LQ P VLP L + YP KF
Sbjct: 1136 KLWAQYHDINDAKRMTISSYSLVLMVLHYLQHACVPHVLPCLHSLYPEKF 1185
Score = 219 (82.2 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 51/121 (42%), Positives = 75/121 (61%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCL----GIRPYE--------FDRGQAIRVLCVLETSDVD 69
R+ +VGST+TGFG DSSD+DMCL G+ P++ F + L +L +
Sbjct: 1012 RICLVGSTITGFGTDSSDIDMCLLPEQGVHPHQHQYHQHHHFHNEKRTEALIILTLFNAV 1071
Query: 70 MC-LEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIFKKADL 128
+ E+F+ +LI A+VPIL+F+D S +EVDLN NN VG++NT+LL YAQ ++ L
Sbjct: 1072 LKDTEVFQDFNLIEARVPILRFKDISNGIEVDLNFNNCVGIKNTYLLQLYAQMDWRTRPL 1131
Query: 129 I 129
+
Sbjct: 1132 V 1132
Score = 36 (17.7 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 74 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTH 113
+ K ++++A V K DS+ N N+ + N +
Sbjct: 163 LMKNQNVVNAHVSDCKSSDSNNNSTSSSNNNSTISSNNNN 202
>UNIPROTKB|F1RF43 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 CTD:167153
OMA:NQKTEAR EMBL:CU855670 EMBL:CU915633 RefSeq:XP_003123800.1
UniGene:Ssc.41247 Ensembl:ENSSSCT00000015417 GeneID:100512336
KEGG:ssc:100512336 Uniprot:F1RF43
Length = 484
Score = 306 (112.8 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 64/148 (43%), Positives = 94/148 (63%)
Query: 87 ILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIF-KKADLIHAKVPILKFQDSSFKL 145
++K + F++ +++ + + H +C + ++ LI AKVPI+KF+D +
Sbjct: 219 VVKEEPCFFQVNQKTEARHILTLVHKH--FCTRLSGYIERPQLIRAKVPIVKFRDKVSCV 276
Query: 146 EVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLM 205
E DLN NN+VG+RNT LL YA ++ R+RPLVL++K WA H INDA T+SSYS LM
Sbjct: 277 EFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHEINDASRGTLSSYSLVLM 336
Query: 206 VIHFLQCGTSP-PVLPNLVAQYPTKFSP 232
V+H+LQ T P P+LP++ YP FSP
Sbjct: 337 VLHYLQ--TLPEPILPSIQKMYPESFSP 362
Score = 189 (71.6 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 43/103 (41%), Positives = 60/103 (58%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIR--PYEFDRGQAIRVLCVLETSDVDMCLEI---FK 76
+LF+VGS++ GFG +SD D+CL ++ P F Q +L C + +
Sbjct: 196 KLFLVGSSLNGFGTRTSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIE 255
Query: 77 KADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ LI AKVPI+KF+D +E DLN NN+VG+RNT LL YA
Sbjct: 256 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYA 298
Score = 38 (18.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 218 VLPNLVAQYPTKFSPNSNIDNIQEGK 243
+L + Y T+F NS + +++E K
Sbjct: 390 LLLGFLKYYATEFDWNSQMISVREAK 415
>UNIPROTKB|Q6PIY7 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IDA]
[GO:0031380 "nuclear RNA-directed RNA polymerase complex"
evidence=IC] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0071044 "histone mRNA catabolic process" evidence=IMP]
Pfam:PF03828 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 EMBL:CH471084 GO:GO:0071044 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0031380 GO:GO:0043631
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR EMBL:AK095818 EMBL:BC026061 EMBL:BC047581
IPI:IPI00167560 IPI:IPI00895778 RefSeq:NP_001107865.1
RefSeq:NP_001107866.1 RefSeq:NP_776158.2 UniGene:Hs.418198
HSSP:Q86MV5 ProteinModelPortal:Q6PIY7 SMR:Q6PIY7 IntAct:Q6PIY7
STRING:Q6PIY7 PhosphoSite:Q6PIY7 DMDM:74737798 PaxDb:Q6PIY7
PRIDE:Q6PIY7 Ensembl:ENST00000296783 Ensembl:ENST00000423041
Ensembl:ENST00000428308 Ensembl:ENST00000453514 GeneID:167153
KEGG:hsa:167153 UCSC:uc003kga.2 UCSC:uc003kgb.2
GeneCards:GC05P078944 HGNC:HGNC:26776 MIM:614121 neXtProt:NX_Q6PIY7
PharmGKB:PA134918975 InParanoid:Q6PIY7 PhylomeDB:Q6PIY7
ChiTaRS:PAPD4 GenomeRNAi:167153 NextBio:88659 ArrayExpress:Q6PIY7
Bgee:Q6PIY7 CleanEx:HS_PAPD4 Genevestigator:Q6PIY7 Uniprot:Q6PIY7
Length = 484
Score = 305 (112.4 bits), Expect = 6.1e-29, Sum P(2) = 6.1e-29
Identities = 65/148 (43%), Positives = 94/148 (63%)
Query: 87 ILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIF-KKADLIHAKVPILKFQDSSFKL 145
++K + F++ +++ + + H +C + ++ LI AKVPI+KF+D +
Sbjct: 219 VVKEEPCFFQVNQKTEARHILTLVHKH--FCTRLSGYIERPQLIRAKVPIVKFRDKVSCV 276
Query: 146 EVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLM 205
E DLN NN+VG+RNT LL YA ++ R+RPLVL++K WA H INDA T+SSYS LM
Sbjct: 277 EFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHQINDASRGTLSSYSLVLM 336
Query: 206 VIHFLQCGTSP-PVLPNLVAQYPTKFSP 232
V+H+LQ T P P+LP+L YP FSP
Sbjct: 337 VLHYLQ--TLPEPILPSLQKIYPESFSP 362
Score = 195 (73.7 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 45/103 (43%), Positives = 60/103 (58%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIR--PYEFDRGQAIRVLCVLETSDVDMCLEI---FK 76
RLF+VGS++ GFG SSD D+CL ++ P F Q +L C + +
Sbjct: 196 RLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIE 255
Query: 77 KADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ LI AKVPI+KF+D +E DLN NN+VG+RNT LL YA
Sbjct: 256 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYA 298
Score = 38 (18.4 bits), Expect = 6.1e-29, Sum P(2) = 6.1e-29
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 218 VLPNLVAQYPTKFSPNSNIDNIQEGK 243
+L + Y T+F NS + +++E K
Sbjct: 390 LLLGFLKYYATEFDWNSQMISVREAK 415
>UNIPROTKB|Q2HJ44 [details] [associations]
symbol:PAPD4 "Poly(A) RNA polymerase GLD2" species:9913
"Bos taurus" [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0043631 "RNA polyadenylation" evidence=ISS]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] Pfam:PF03828 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006397
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079
HOVERGEN:HBG097533 EMBL:BT025394 EMBL:BC113319 IPI:IPI00702849
IPI:IPI00843674 RefSeq:NP_001039826.1 UniGene:Bt.92095
ProteinModelPortal:Q2HJ44 STRING:Q2HJ44 PRIDE:Q2HJ44
Ensembl:ENSBTAT00000008885 Ensembl:ENSBTAT00000048886 GeneID:533862
KEGG:bta:533862 CTD:167153 HOGENOM:HOG000088606 InParanoid:Q2HJ44
OMA:NQKTEAR OrthoDB:EOG4P2Q22 NextBio:20876175 Uniprot:Q2HJ44
Length = 484
Score = 306 (112.8 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 64/157 (40%), Positives = 99/157 (63%)
Query: 87 ILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIF-KKADLIHAKVPILKFQDSSFKL 145
++K + F++ +++ + + H +C + ++ LI AKVPI+KF+D +
Sbjct: 219 VVKEEPCFFQVNQKTEARHILTLVHKH--FCTRLSGYIERPQLIRAKVPIVKFRDKVSCV 276
Query: 146 EVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLM 205
E DLN NN+VG+RNT LL YA ++ R+RPLVL++K WA H+INDA T+SSYS LM
Sbjct: 277 EFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHDINDASRGTLSSYSLVLM 336
Query: 206 VIHFLQCGTSP-PVLPNLVAQYPTKFSPNSNIDNIQE 241
V+H+LQ T P P+LP++ YP FSP+ + + +
Sbjct: 337 VLHYLQ--TLPEPILPSIQKIYPESFSPSIQLHLVHQ 371
Score = 195 (73.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 45/103 (43%), Positives = 60/103 (58%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIR--PYEFDRGQAIRVLCVLETSDVDMCLEI---FK 76
RLF+VGS++ GFG SSD D+CL ++ P F Q +L C + +
Sbjct: 196 RLFLVGSSLNGFGTRSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIE 255
Query: 77 KADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ LI AKVPI+KF+D +E DLN NN+VG+RNT LL YA
Sbjct: 256 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYA 298
Score = 39 (18.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 199 SYSFTLMVIHFLQCGTSPPVLP----NL-------VAQYPTKFSPNSNIDNIQEGK 243
S S L ++H C PP L NL + Y T+F NS + +++E K
Sbjct: 361 SPSIQLHLVHQAPCNV-PPYLSKNESNLGDLLLGFLKYYATEFDWNSQMISVREAK 415
>ZFIN|ZDB-GENE-050522-536 [details] [associations]
symbol:papd4 "PAP associated domain containing 4"
species:7955 "Danio rerio" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA;ISS] [GO:0043631 "RNA
polyadenylation" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
ZFIN:ZDB-GENE-050522-536 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 KO:K14079 HOVERGEN:HBG097533 CTD:167153
HOGENOM:HOG000088606 OrthoDB:EOG4P2Q22 EMBL:BC095312
IPI:IPI00607291 RefSeq:NP_001018436.1 UniGene:Dr.75639
ProteinModelPortal:Q503I9 GeneID:553626 KEGG:dre:553626
InParanoid:Q503I9 NextBio:20880363 Uniprot:Q503I9
Length = 489
Score = 301 (111.0 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 64/126 (50%), Positives = 81/126 (64%)
Query: 118 YAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLV 177
Y +K LI AKVPI+KF+D +E DLN NN VG+RNT LL YA ++ R+RPLV
Sbjct: 249 YKLSYIEKPQLIRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYAFVEKRVRPLV 308
Query: 178 LLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSP-PVLPNLVAQYPTKFSPNSNI 236
L++K WA H INDA T+SSY+ LMV+H+LQ T P PV+P L YPT F P +I
Sbjct: 309 LVIKKWANHHCINDASRGTLSSYTLVLMVLHYLQ--TLPEPVIPCLQRDYPTCFDPKMDI 366
Query: 237 DNIQEG 242
+ G
Sbjct: 367 HLVPSG 372
Score = 181 (68.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 44/99 (44%), Positives = 60/99 (60%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIRPYEFD-RGQAIRVLCVLETSDVDMCLEIFKKADL 80
++F+ GS++ GFG SSD D+CL I + R A+ VL ++ + L +K L
Sbjct: 202 KVFLGGSSLNGFGSRSSDADLCLVIEEGPVNHRKDAVYVLSLVRK--LLYKLSYIEKPQL 259
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
I AKVPI+KF+D +E DLN NN VG+RNT LL YA
Sbjct: 260 IRAKVPIVKFRDRISGVEFDLNFNNTVGIRNTFLLRTYA 298
>UNIPROTKB|E2RQN5 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AAEX03002115 Ensembl:ENSCAFT00000014375 NextBio:20893469
Uniprot:E2RQN5
Length = 480
Score = 300 (110.7 bits), Expect = 2.6e-26, P = 2.6e-26
Identities = 60/110 (54%), Positives = 78/110 (70%)
Query: 124 KKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLW 183
++ LI AKVPI+KF+D +E DLN NN+VG+RNT LL YA ++ R+RPLVL++K W
Sbjct: 251 ERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYLENRVRPLVLVIKKW 310
Query: 184 AQAHNINDAKNMTISSYSFTLMVIHFLQCGTSP-PVLPNLVAQYPTKFSP 232
A H INDA T+SSYS LMV+H+LQ T P P+LP++ YP FSP
Sbjct: 311 ASHHEINDASRGTLSSYSLVLMVLHYLQ--TLPEPILPSIQKIYPESFSP 358
Score = 191 (72.3 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 42/99 (42%), Positives = 61/99 (61%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIRPYEFD-RGQAIRVLCVLETSDVDMCLEIFKKADL 80
RLF+VGS++ GFG SSD D+CL ++ + + +A +L ++ ++ L
Sbjct: 196 RLFLVGSSLNGFGTRSSDGDLCLVVKEEPVNQKTEARHILTLVHKHFCTRLSGYIERPQL 255
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
I AKVPI+KF+D +E DLN NN+VG+RNT LL YA
Sbjct: 256 IRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYA 294
Score = 38 (18.4 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 218 VLPNLVAQYPTKFSPNSNIDNIQEGK 243
+L + Y T+F NS + +++E K
Sbjct: 386 LLLGFLKYYATEFDWNSQMISVREAK 411
>MGI|MGI:2140950 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0043631 "RNA polyadenylation" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071044 "histone
mRNA catabolic process" evidence=ISO] MGI:MGI:2140950 Pfam:PF03828
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 ChiTaRS:PAPD4 EMBL:AM419011
EMBL:BC016629 EMBL:AK033141 IPI:IPI00130216 IPI:IPI00896066
RefSeq:NP_598666.1 UniGene:Mm.242865 ProteinModelPortal:Q91YI6
SMR:Q91YI6 STRING:Q91YI6 PhosphoSite:Q91YI6 PRIDE:Q91YI6
DNASU:100715 Ensembl:ENSMUST00000048702 GeneID:100715
KEGG:mmu:100715 UCSC:uc007rkz.1 UCSC:uc007rla.1 InParanoid:Q91YI6
NextBio:354606 Bgee:Q91YI6 Genevestigator:Q91YI6 Uniprot:Q91YI6
Length = 484
Score = 296 (109.3 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 64/147 (43%), Positives = 93/147 (63%)
Query: 87 ILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIF-KKADLIHAKVPILKFQDSSFKL 145
++K + F++ +++ + + H +C + ++ LI AKVPI+KF+D +
Sbjct: 219 VVKEEPCFFQVNQKTEARHILTLVHKH--FCTRLSGYIERPQLIRAKVPIVKFRDKVSCV 276
Query: 146 EVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLM 205
E DLN NN VG+RNT LL YA ++ R+RPLVL++K WA H+INDA T+SSYS LM
Sbjct: 277 EFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHDINDASRGTLSSYSLVLM 336
Query: 206 VIHFLQCGTSP-PVLPNLVAQYPTKFS 231
V+H+LQ T P P+LP+L YP FS
Sbjct: 337 VLHYLQ--TLPEPILPSLQKIYPESFS 361
Score = 192 (72.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 45/103 (43%), Positives = 59/103 (57%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIR--PYEFDRGQAIRVLCVLETSDVDMCLEI---FK 76
RLF+VGS++ GFG SSD D+CL ++ P F Q +L C + +
Sbjct: 196 RLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIE 255
Query: 77 KADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ LI AKVPI+KF+D +E DLN NN VG+RNT LL YA
Sbjct: 256 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYA 298
Score = 37 (18.1 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 199 SYSFTLMVIHFLQCGTSPPVLPN----------LVAQYPTKFSPNSNIDNIQEGK 243
S S L ++H C P + N + Y T+F N+ + +++E K
Sbjct: 361 STSVQLHLVHHAPCNVPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMISVREAK 415
>RGD|1306438 [details] [associations]
symbol:Papd4 "PAP associated domain containing 4" species:10116
"Rattus norvegicus" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0043631 "RNA polyadenylation" evidence=ISO;ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=ISO;ISS] Pfam:PF03828 RGD:1306438
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0006397 GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 GeneTree:ENSGT00550000074490
KO:K14079 HOVERGEN:HBG097533 CTD:167153 HOGENOM:HOG000088606
OMA:NQKTEAR OrthoDB:EOG4P2Q22 EMBL:BC085771 IPI:IPI00372891
RefSeq:NP_001008373.1 UniGene:Rn.98477 ProteinModelPortal:Q5U315
STRING:Q5U315 Ensembl:ENSRNOT00000016135 GeneID:361878
KEGG:rno:361878 UCSC:RGD:1306438 InParanoid:Q5U315 NextBio:677940
Genevestigator:Q5U315 Uniprot:Q5U315
Length = 484
Score = 295 (108.9 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 64/147 (43%), Positives = 92/147 (62%)
Query: 87 ILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIF-KKADLIHAKVPILKFQDSSFKL 145
++K + F++ +++ + + H +C + ++ LI AKVPI+KF+D +
Sbjct: 219 VVKEEPCFFQVNQKTEARHILTLVHKH--FCTRLSGYIERPQLIRAKVPIVKFRDKVSCV 276
Query: 146 EVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLM 205
E DLN NN VG+RNT LL YA ++ R+RPLVL++K WA H INDA T+SSYS LM
Sbjct: 277 EFDLNVNNTVGIRNTFLLRTYAYLENRVRPLVLVIKKWASHHEINDASRGTLSSYSLVLM 336
Query: 206 VIHFLQCGTSP-PVLPNLVAQYPTKFS 231
V+H+LQ T P P+LP+L YP FS
Sbjct: 337 VLHYLQ--TLPEPILPSLQKIYPESFS 361
Score = 192 (72.6 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 45/103 (43%), Positives = 59/103 (57%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIR--PYEFDRGQAIRVLCVLETSDVDMCLEI---FK 76
RLF+VGS++ GFG SSD D+CL ++ P F Q +L C + +
Sbjct: 196 RLFLVGSSLNGFGARSSDGDLCLVVKEEPCFFQVNQKTEARHILTLVHKHFCTRLSGYIE 255
Query: 77 KADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ LI AKVPI+KF+D +E DLN NN VG+RNT LL YA
Sbjct: 256 RPQLIRAKVPIVKFRDKVSCVEFDLNVNNTVGIRNTFLLRTYA 298
Score = 37 (18.1 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 199 SYSFTLMVIHFLQCGTSPPVLPN----------LVAQYPTKFSPNSNIDNIQEGK 243
S S L ++H C P + N + Y T+F N+ + +++E K
Sbjct: 361 STSVQLHLVHHAPCNVPPYLSKNESSLGDLLLGFLKYYATEFDWNTQMISVREAK 415
>WB|WBGene00009284 [details] [associations]
symbol:F31C3.2 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] Pfam:PF03828 GO:GO:0045132
InterPro:IPR002058 EMBL:Z92784 GeneTree:ENSGT00550000074490
EMBL:Z81526 UniGene:Cel.7025 GeneID:173373 KEGG:cel:CELE_F31C3.2
CTD:173373 NextBio:879379 RefSeq:NP_001021434.1
ProteinModelPortal:G5EFR3 SMR:G5EFR3 IntAct:G5EFR3 PRIDE:G5EFR3
EnsemblMetazoa:F31C3.2b WormBase:F31C3.2b OMA:PFDAINT
Uniprot:G5EFR3
Length = 808
Score = 259 (96.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 51/113 (45%), Positives = 76/113 (67%)
Query: 120 QKIFKKADLIHAKVPILKF-QDSSFK-LEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLV 177
+KI K L+ AKVPI+K + F +EVD+N NN+ G+ N+HL++ Y+ D R+ L
Sbjct: 570 KKIIKTMQLVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALA 629
Query: 178 LLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKF 230
LLVK WA IN+A++ ++SY+ L+V+H+LQCG +P V+PNL +P KF
Sbjct: 630 LLVKHWAMVTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKF 682
Score = 68 (29.0 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 26/84 (30%), Positives = 42/84 (50%)
Query: 21 VRLFVVGSTMTGFGLDSSDVDMCL-----GIR-----PYEFDRGQAIRVLCVLET----S 66
++L GST+ G G +SD+D+CL G + + DR + ++L ++ S
Sbjct: 504 IKLQTTGSTVNGCGSFNSDMDLCLCFPTNGYKGQVCDDFHCDRNYSTKILRKIDKAFRRS 563
Query: 67 DVDMCLE-IFKKADLIHAKVPILK 89
L+ I K L+ AKVPI+K
Sbjct: 564 HWSHPLKKIIKTMQLVPAKVPIVK 587
>WB|WBGene00001596 [details] [associations]
symbol:gld-2 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0043631 "RNA polyadenylation" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] [GO:0031379 "RNA-directed RNA polymerase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IDA] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 300 (110.7 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 66/130 (50%), Positives = 82/130 (63%)
Query: 104 NNVVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSS-FK-LEVDLNCNNVVGVRNTH 161
N+ V V N L +K + LI AKVPIL+ ++ F + VDLN NN V +RNTH
Sbjct: 622 NDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTH 681
Query: 162 LLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPN 221
LL Y+ DWR+RPLV +VK WA+ INDA + +SYS LMVIHFLQCG + VLPN
Sbjct: 682 LLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLVLMVIHFLQCGPTK-VLPN 740
Query: 222 LVAQYPTKFS 231
L YP +FS
Sbjct: 741 LQQSYPNRFS 750
Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 47/100 (47%), Positives = 64/100 (64%)
Query: 23 LFVVGSTMTGFGLDSSDVDMCLGIRPYEFD-RGQAIRVL-CVLETSDVDMCLEIFKKADL 80
L+VVGS++ GFG +SSD+D+CL I + D + A+ VL +L T + +E K L
Sbjct: 590 LYVVGSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQK---L 646
Query: 81 IHAKVPILKFQDSS-FK-LEVDLNCNNVVGVRNTHLLYCY 118
I AKVPIL+ ++ F + VDLN NN V +RNTHLL CY
Sbjct: 647 ILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLL-CY 685
>UNIPROTKB|O17087 [details] [associations]
symbol:gld-2 "Poly(A) RNA polymerase gld-2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03828 GO:GO:0005524 GO:GO:0009792
GO:GO:0007126 GO:GO:0002009 GO:GO:0006898 GO:GO:0040010
GO:GO:0006915 GO:GO:0046872 GO:GO:0006397 GO:GO:0042127
GO:GO:0040035 GO:GO:0040020 GO:GO:0006997 GO:GO:0051302
GO:GO:0043186 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 KO:K14079 EMBL:AY125085
EMBL:FO081588 PIR:T32274 PIR:T32275 RefSeq:NP_001021844.1
RefSeq:NP_001021845.1 RefSeq:NP_491841.2 RefSeq:NP_491842.2
UniGene:Cel.9280 ProteinModelPortal:O17087 IntAct:O17087
STRING:O17087 PaxDb:O17087 PRIDE:O17087 EnsemblMetazoa:ZC308.1a
GeneID:172338 KEGG:cel:CELE_ZC308.1 UCSC:ZC308.1a CTD:172338
WormBase:ZC308.1a WormBase:ZC308.1b WormBase:ZC308.1c
WormBase:ZC308.1d InParanoid:O17087 OMA:MEDWELD NextBio:875101
GO:GO:0031379 Uniprot:O17087
Length = 1113
Score = 300 (110.7 bits), Expect = 2.5e-25, P = 2.5e-25
Identities = 66/130 (50%), Positives = 82/130 (63%)
Query: 104 NNVVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSS-FK-LEVDLNCNNVVGVRNTH 161
N+ V V N L +K + LI AKVPIL+ ++ F + VDLN NN V +RNTH
Sbjct: 622 NDAVVVLNLILSTLQYEKFVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTH 681
Query: 162 LLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPN 221
LL Y+ DWR+RPLV +VK WA+ INDA + +SYS LMVIHFLQCG + VLPN
Sbjct: 682 LLCYYSSYDWRVRPLVSVVKEWAKRKGINDANKSSFTSYSLVLMVIHFLQCGPTK-VLPN 740
Query: 222 LVAQYPTKFS 231
L YP +FS
Sbjct: 741 LQQSYPNRFS 750
Score = 178 (67.7 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 47/100 (47%), Positives = 64/100 (64%)
Query: 23 LFVVGSTMTGFGLDSSDVDMCLGIRPYEFD-RGQAIRVL-CVLETSDVDMCLEIFKKADL 80
L+VVGS++ GFG +SSD+D+CL I + D + A+ VL +L T + +E K L
Sbjct: 590 LYVVGSSLNGFGNNSSDMDLCLMITNKDLDQKNDAVVVLNLILSTLQYEKFVESQK---L 646
Query: 81 IHAKVPILKFQDSS-FK-LEVDLNCNNVVGVRNTHLLYCY 118
I AKVPIL+ ++ F + VDLN NN V +RNTHLL CY
Sbjct: 647 ILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLL-CY 685
>UNIPROTKB|Q641A1 [details] [associations]
symbol:papd4-a "Poly(A) RNA polymerase GLD2-A" species:8355
"Xenopus laevis" [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0043631 "RNA polyadenylation"
evidence=ISS] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0007275 GO:GO:0005524 GO:GO:0005737 GO:GO:0030154
GO:GO:0046872 GO:GO:0006397 GO:GO:0048477 GO:GO:0004652
InterPro:IPR002058 GO:GO:0043631 KO:K14079 EMBL:BC082438
RefSeq:NP_001087892.1 UniGene:Xl.1354 ProteinModelPortal:Q641A1
GeneID:447753 KEGG:xla:447753 CTD:447753 Xenbase:XB-GENE-1217415
HOVERGEN:HBG097533 Uniprot:Q641A1
Length = 509
Score = 291 (107.5 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 60/119 (50%), Positives = 78/119 (65%)
Query: 113 HLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWR 172
H L+ ++ I AKVPI+KF+D E DLN NNVVG+RNT LL YA ++ R
Sbjct: 266 HKLFYTRLSYIERLQFIRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYAYLESR 325
Query: 173 IRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSP-PVLPNLVAQYPTKF 230
+RPLVL++K WA H INDA T+SSY+ LMV+H+LQ T P P+LP+L +YP F
Sbjct: 326 VRPLVLVIKKWANHHGINDASRGTLSSYTLVLMVLHYLQ--TLPEPILPSLQKKYPECF 382
Score = 183 (69.5 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRG-QAIRVLCVLETSDVDMCLEIFKKADL 80
RL++VGS++ GFG SD D+CL ++ ++ +A ++L +L L ++
Sbjct: 223 RLYLVGSSLNGFGTRISDADLCLVLKEEPMNQHTEATQILGLLHKLFYTR-LSYIERLQF 281
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
I AKVPI+KF+D E DLN NNVVG+RNT LL YA
Sbjct: 282 IRAKVPIVKFRDKVSGAEFDLNVNNVVGIRNTFLLRTYA 320
>TAIR|locus:2063937 [details] [associations]
symbol:HESO1 "HEN1 suppressor 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016779
"nucleotidyltransferase activity" evidence=IDA] [GO:0071076 "RNA 3'
uridylation" evidence=IMP] GO:GO:0005634 GO:GO:0005737
EMBL:CP002685 GO:GO:0071076 GO:GO:0016779 UniGene:At.21484
UniGene:At.37137 EMBL:BT015881 EMBL:BT020198 IPI:IPI00527276
RefSeq:NP_181504.2 ProteinModelPortal:Q5XET5 SMR:Q5XET5
IntAct:Q5XET5 PRIDE:Q5XET5 EnsemblPlants:AT2G39740.1 GeneID:818559
KEGG:ath:AT2G39740 TAIR:At2g39740 InParanoid:Q5XET5 OMA:VEDPFEQ
PhylomeDB:Q5XET5 ProtClustDB:CLSN2681710 Genevestigator:Q5XET5
Uniprot:Q5XET5
Length = 511
Score = 220 (82.5 bits), Expect = 2.3e-17, P = 2.3e-17
Identities = 47/106 (44%), Positives = 68/106 (64%)
Query: 123 FKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKL 182
+K +IHA+VPILK ++ D++ +N+ G+ + L+ +++D R R LVLLVK
Sbjct: 105 YKLQFVIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVLLVKE 164
Query: 183 WAQAHNINDAKNMTISSYSFTLMVI-HFLQCGTSPPVLPNLVAQYP 227
WA+AHNIND+K T +SYS +L+VI HF C P +LP L YP
Sbjct: 165 WAKAHNINDSKTGTFNSYSLSLLVIFHFQTC--VPAILPPLRVIYP 208
>MGI|MGI:2445126 [details] [associations]
symbol:Zcchc11 "zinc finger, CCHC domain containing 11"
species:10090 "Mus musculus" [GO:0001816 "cytokine production"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0010586 "miRNA metabolic
process" evidence=IMP] [GO:0010587 "miRNA catabolic process"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031054 "pre-miRNA processing"
evidence=ISO] [GO:0031123 "RNA 3'-end processing" evidence=ISO;IDA]
[GO:0031664 "regulation of lipopolysaccharide-mediated signaling
pathway" evidence=IDA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO;IDA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IMP]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 MGI:MGI:2445126 Pfam:PF03828
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0032755 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
EMBL:AL626783 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
GO:GO:0070102 EMBL:AL627238 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 CTD:23318 KO:K13291
ChiTaRS:ZCCHC11 EMBL:BC150791 EMBL:AK220327 EMBL:AK134388
IPI:IPI00648042 RefSeq:NP_780681.2 UniGene:Mm.25181
UniGene:Mm.446602 ProteinModelPortal:B2RX14 SMR:B2RX14
DIP:DIP-48571N STRING:B2RX14 PhosphoSite:B2RX14 PaxDb:B2RX14
PRIDE:B2RX14 Ensembl:ENSMUST00000043368 Ensembl:ENSMUST00000155068
GeneID:230594 KEGG:mmu:230594 UCSC:uc008ubd.1 HOGENOM:HOG000231134
InParanoid:A2A8R8 NextBio:379961 Bgee:B2RX14 Genevestigator:B2RX14
Uniprot:B2RX14
Length = 1644
Score = 177 (67.4 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 1070 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1129
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1130 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1175
Score = 142 (55.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 452 VLGILKKSALYIDVESDF------HAKVPVVVCKDRKSALLCRVSAGNDMACLTTDLLAA 505
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+++ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 506 LGKVEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKPPLLPCLLGS 564
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 565 WIEGFDPK-RMDDFQ 578
Score = 88 (36.0 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 36/111 (32%), Positives = 54/111 (48%)
Query: 7 VEEY--VRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE V T +RL+ GS++T F L SSDV++ + P I+VL +L+
Sbjct: 400 VEEMSKVIMTFLPECSLRLY--GSSLTKFALKSSDVNIDIKFPPKMNHPDLLIQVLGILK 457
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
S L I ++D HAKVP++ +D L ++ N + T LL
Sbjct: 458 KS----ALYIDVESDF-HAKVPVVVCKDRKSALLCRVSAGNDMACLTTDLL 503
>TAIR|locus:2043669 [details] [associations]
symbol:AT2G45620 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA;ISS] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC003680 eggNOG:COG5260
InterPro:IPR002058 GO:GO:0016779 EMBL:AF360181 EMBL:AY039997
IPI:IPI00541796 PIR:T00875 RefSeq:NP_566048.1 UniGene:At.19458
UniGene:At.74976 ProteinModelPortal:O64642 SMR:O64642 STRING:O64642
PaxDb:O64642 PRIDE:O64642 EnsemblPlants:AT2G45620.1 GeneID:819170
KEGG:ath:AT2G45620 TAIR:At2g45620 HOGENOM:HOG000114999
InParanoid:O64642 OMA:DINKSEM PhylomeDB:O64642
ProtClustDB:CLSN2688946 ArrayExpress:O64642 Genevestigator:O64642
Uniprot:O64642
Length = 764
Score = 220 (82.5 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 50/113 (44%), Positives = 69/113 (61%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
L A+VPI+K D + D+ NNV+ V NT LL YAQ+D R+R L +VK WA++
Sbjct: 527 LTRARVPIVKLMDPVTGISCDICINNVLAVVNTKLLRDYAQIDVRLRQLAFIVKHWAKSR 586
Query: 188 NINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNIDNIQ 240
+N+ T+SSY++ LM IHFLQ PP+LP L PT +S +DNI+
Sbjct: 587 RVNETYQGTLSSYAYVLMCIHFLQ-QRRPPILPCLQEMEPT-YSVR--VDNIR 635
Score = 140 (54.3 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 34/101 (33%), Positives = 51/101 (50%)
Query: 20 HVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKAD 79
H +L++ GS FG SD+D+CL I + ++ + + L + SD +
Sbjct: 472 HAKLYLYGSCANSFGFPKSDIDVCLAIEGDDINKSEMLLKLAEILESD-----NLQNVQA 526
Query: 80 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQ 120
L A+VPI+K D + D+ NNV+ V NT LL YAQ
Sbjct: 527 LTRARVPIVKLMDPVTGISCDICINNVLAVVNTKLLRDYAQ 567
>UNIPROTKB|I3L9X5 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 InterPro:IPR002934
Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158 SMART:SM00343
Pfam:PF03828 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00550000074490 OMA:TDCRSNL EMBL:CU929620
Ensembl:ENSSSCT00000029203 Uniprot:I3L9X5
Length = 1168
Score = 177 (67.4 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 817 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 876
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 877 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 922
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ +LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 145 VLGILKKSVLYLDVESDF------HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLAA 198
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+M+ PLVL + WA+ I+ + I SY F LMV+ FLQ P+LP L+
Sbjct: 199 LGKMEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKHPLLPCLLGS 257
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 258 WIEGFDPK-RMDDFQ 271
Score = 82 (33.9 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 21 VRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKADL 80
+RL+ GS++T F L SSDV++ + P I+VL +L+ S + + +E +D
Sbjct: 109 LRLY--GSSLTKFALKSSDVNIDIKFPPKMNHPDLLIQVLGILKKSVLYLDVE----SDF 162
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
HAKVP++ +D L ++ N + T LL
Sbjct: 163 -HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLL 196
>UNIPROTKB|E9PKY2 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00975609
ProteinModelPortal:E9PKY2 SMR:E9PKY2 Ensembl:ENST00000528642
ArrayExpress:E9PKY2 Bgee:E9PKY2 Uniprot:E9PKY2
Length = 1203
Score = 177 (67.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 982 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1041
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1042 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1087
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ ++LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 432 VLGILKKNVLYVDVESDF------HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTA 485
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+++ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 486 LGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKPPLLPCLLGS 544
Query: 226 Y-PTKF-SPN 233
+ P +PN
Sbjct: 545 WSPLALETPN 554
Score = 81 (33.6 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L SSDV++ + P I+VL +L+
Sbjct: 380 VEEMSKVITTFLPECSLRLY--GSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLGILK 437
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
+ L + ++D HAKVP++ +D L ++ N + T LL
Sbjct: 438 KN----VLYVDVESDF-HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLL 483
>UNIPROTKB|F1S6H9 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 InterPro:IPR025829 Pfam:PF13696 EMBL:CU929620
Ensembl:ENSSSCT00000004271 Uniprot:F1S6H9
Length = 1363
Score = 177 (67.4 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 771 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 830
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 831 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 876
Score = 136 (52.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ +LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 148 VLGILKKSVLYLDVESDF------HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLAA 201
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+M+ PLVL + WA+ I+ + I SY F LMV+ FLQ P+LP L+
Sbjct: 202 LGKMEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKHPLLPCLLGS 260
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 261 WIEGFDPK-RMDDFQ 274
Score = 82 (33.9 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 21 VRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKADL 80
+RL+ GS++T F L SSDV++ + P I+VL +L+ S + + +E +D
Sbjct: 112 LRLY--GSSLTKFALKSSDVNIDIKFPPKMNHPDLLIQVLGILKKSVLYLDVE----SDF 165
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
HAKVP++ +D L ++ N + T LL
Sbjct: 166 -HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLL 199
>UNIPROTKB|F1PFM0 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032088
"negative regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0031664 "regulation of
lipopolysaccharide-mediated signaling pathway" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031054
"pre-miRNA processing" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0001816 "cytokine production"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909 PROSITE:PS50158
SMART:SM00343 Pfam:PF03828 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0031054
GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827
GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:AAEX03009705 Ensembl:ENSCAFT00000006009
Uniprot:F1PFM0
Length = 1635
Score = 177 (67.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 1043 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1102
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1103 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1148
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 43/135 (31%), Positives = 65/135 (48%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ +LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 424 VLGILKKSVLYIDVESDF------HAKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAA 477
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+M+ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 478 LGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVLFFLQ-QRKPPLLPCLLGS 536
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 537 WIEGFDPK-RMDDFQ 550
Score = 81 (33.6 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L +SDV++ + P I+VL +L+
Sbjct: 372 VEEMSKVITTFLPECSLRLY--GSSLTKFALKNSDVNIDIKFPPRMNHPDLLIQVLGILK 429
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
S L I ++D HAKVP++ +D L ++ N + T LL
Sbjct: 430 KS----VLYIDVESDF-HAKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLL 475
>UNIPROTKB|Q5TAX3 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001816 "cytokine production" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IMP] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010586 "miRNA metabolic process" evidence=ISS] [GO:0071044
"histone mRNA catabolic process" evidence=IMP] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0010587 "miRNA catabolic
process" evidence=IMP] [GO:0031123 "RNA 3'-end processing"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 EMBL:CH471059
GO:GO:0008270 GO:GO:0003676 GO:GO:0031054 GO:GO:0032088
Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0019827 GO:GO:0001816
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0010587
GO:GO:0031123 GO:GO:0031664 EMBL:AK303532 EMBL:AL138849
EMBL:BC131734 EMBL:D83776 IPI:IPI00289861 IPI:IPI00550431
RefSeq:NP_001009881.1 RefSeq:NP_056084.1 UniGene:Hs.655407
ProteinModelPortal:Q5TAX3 SMR:Q5TAX3 IntAct:Q5TAX3 STRING:Q5TAX3
PhosphoSite:Q5TAX3 DMDM:116242850 PaxDb:Q5TAX3 PRIDE:Q5TAX3
DNASU:23318 Ensembl:ENST00000257177 Ensembl:ENST00000355809
Ensembl:ENST00000371544 GeneID:23318 KEGG:hsa:23318 UCSC:uc001ctx.2
CTD:23318 GeneCards:GC01M052888 HGNC:HGNC:28981 HPA:HPA027412
HPA:HPA027973 MIM:613692 neXtProt:NX_Q5TAX3 PharmGKB:PA134918178
KO:K13291 OrthoDB:EOG4DZ1TJ ChiTaRS:ZCCHC11 GenomeRNAi:23318
NextBio:45208 ArrayExpress:Q5TAX3 Bgee:Q5TAX3 CleanEx:HS_ZCCHC11
Genevestigator:Q5TAX3 GermOnline:ENSG00000134744 Uniprot:Q5TAX3
Length = 1644
Score = 177 (67.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 1053 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1112
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1113 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1158
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ ++LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 432 VLGILKKNVLYVDVESDF------HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTA 485
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+++ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 486 LGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKPPLLPCLLGS 544
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 545 WIEGFDPK-RMDDFQ 558
Score = 81 (33.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L SSDV++ + P I+VL +L+
Sbjct: 380 VEEMSKVITTFLPECSLRLY--GSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLGILK 437
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
+ L + ++D HAKVP++ +D L ++ N + T LL
Sbjct: 438 KN----VLYVDVESDF-HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLL 483
>UNIPROTKB|J9P9X1 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00550000074490
OMA:TDCRSNL EMBL:AAEX03009705 Ensembl:ENSCAFT00000048947
Uniprot:J9P9X1
Length = 1647
Score = 177 (67.4 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 1055 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1114
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1115 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1160
Score = 148 (57.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 43/135 (31%), Positives = 65/135 (48%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ +LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 436 VLGILKKSVLYIDVESDF------HAKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLLAA 489
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+M+ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 490 LGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVLFFLQ-QRKPPLLPCLLGS 548
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 549 WIEGFDPK-RMDDFQ 562
Score = 81 (33.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 34/111 (30%), Positives = 54/111 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L +SDV++ + P I+VL +L+
Sbjct: 384 VEEMSKVITTFLPECSLRLY--GSSLTKFALKNSDVNIDIKFPPRMNHPDLLIQVLGILK 441
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
S L I ++D HAKVP++ +D L ++ N + T LL
Sbjct: 442 KS----VLYIDVESDF-HAKVPVVVCKDRKSGLLCRVSAGNDMACLTTDLL 487
>UNIPROTKB|F1MCY7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070102 "interleukin-6-mediated signaling pathway"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0031054 "pre-miRNA processing" evidence=IEA] [GO:0019827 "stem
cell maintenance" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
GO:GO:0019827 GO:GO:0001816 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0010587 GO:GO:0031123
GO:GO:0031664 EMBL:DAAA02008880 EMBL:DAAA02008879 IPI:IPI01003734
Ensembl:ENSBTAT00000003525 OMA:TDCRSNL Uniprot:F1MCY7
Length = 1667
Score = 177 (67.4 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 41/107 (38%), Positives = 64/107 (59%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+ +I
Sbjct: 1075 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIG 1134
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++ LMV++FLQ PPV+P L + K P +D
Sbjct: 1135 DASRGSLSSYAYILMVLYFLQ-QRKPPVIPVLQEIFDGKQIPQRMVD 1180
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 44/137 (32%), Positives = 66/137 (48%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQD--SSFKLEVDLNCNNVVGVRNTHLL 163
V+G+ +LY + F HAKVP++ +D S L ++ N + T LL
Sbjct: 453 VLGILKKSVLYVDVESDF------HAKVPVVVCKDRKSHSGLLCRVSAGNDMACLTTDLL 506
Query: 164 YCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLV 223
+M+ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 507 AALGKMEPVFTPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKPPLLPCLL 565
Query: 224 AQYPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 566 GSWIEGFDPK-RMDDFQ 581
Score = 76 (31.8 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L SSDV++ + P I+VL +L+
Sbjct: 401 VEEMSKVVTTFLPECSLRLY--GSSLTKFALKSSDVNIDIKFPPKMNHPDLLIQVLGILK 458
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQD--SSFKLEVDLNCNNVVGVRNTHLL 115
S L + ++D HAKVP++ +D S L ++ N + T LL
Sbjct: 459 KS----VLYVDVESDF-HAKVPVVVCKDRKSHSGLLCRVSAGNDMACLTTDLL 506
>POMBASE|SPAC821.04c [details] [associations]
symbol:cid13 "poly(A) polymerase Cid13" species:4896
"Schizosaccharomyces pombe" [GO:0003730 "mRNA 3'-UTR binding"
evidence=IC] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] [GO:0033314 "mitotic DNA replication
checkpoint" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC821.04c
Pfam:PF03828 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006378
GO:GO:0003730 GO:GO:0033314 eggNOG:COG5260 OrthoDB:EOG46QB1M
GO:GO:0004652 InterPro:IPR002058 PIR:T41715 RefSeq:NP_593157.1
ProteinModelPortal:Q9UT49 IntAct:Q9UT49 STRING:Q9UT49 PRIDE:Q9UT49
EnsemblFungi:SPAC821.04c.1 GeneID:2543204 KEGG:spo:SPAC821.04c
OMA:DICIIAP NextBio:20804227 Uniprot:Q9UT49
Length = 578
Score = 208 (78.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 45/107 (42%), Positives = 66/107 (61%)
Query: 118 YAQKIFKKADLIH-AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPL 176
+A+ KK I AKVPI+K DS +L D N N + NT L+ Y D R+RPL
Sbjct: 133 FARNGLKKVVCISTAKVPIVKVWDSELQLSCDCNINKTISTLNTRLMRSYVLCDPRVRPL 192
Query: 177 VLLVKLWAQAHNINDA-KNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
++++K WA+ +NDA + T++SY+ + MVI+FLQ PP+LP+L
Sbjct: 193 IVMIKYWAKRRCLNDAAEGGTLTSYTISCMVINFLQ-KRDPPILPSL 238
>DICTYBASE|DDB_G0281431 [details] [associations]
symbol:DDB_G0281431 "Terminal uridylyltransferase 4"
species:44689 "Dictyostelium discoideum" [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 dictyBase:DDB_G0281431 Pfam:PF03828 EMBL:AAFI02000041
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_640670.1
ProteinModelPortal:Q54TZ1 EnsemblProtists:DDB0205577 GeneID:8623055
KEGG:ddi:DDB_G0281431 InParanoid:Q54TZ1 Uniprot:Q54TZ1
Length = 920
Score = 211 (79.3 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 45/131 (34%), Positives = 76/131 (58%)
Query: 98 EVDLNCNNVVGVRNTHLLYCYAQKIFKK------ADLIHAKVPILKFQDSSFKLEVDLNC 151
++D+ C N+ RN L I KK + ++VP++KF D+ + + +DL
Sbjct: 622 DIDV-CANLK--RNDEKLIFIISSILKKNGYENIVTISQSRVPLIKFFDAKYDIHIDLCI 678
Query: 152 NNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQ 211
NN++ + N+ L+ Y+ +D R+ PL +L+K WA++ +NDA ++SSYS+ + + FLQ
Sbjct: 679 NNLLAIENSRLIKSYSSIDSRMEPLFMLIKTWAKSKGLNDAAEKSLSSYSYANLTVFFLQ 738
Query: 212 CGTSPPVLPNL 222
PPVLP L
Sbjct: 739 T-RQPPVLPCL 748
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/115 (24%), Positives = 62/115 (53%)
Query: 5 KAVEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
K+ ++ R R + +RLF+ GS++ L +SD+D+C ++ D + +L+
Sbjct: 588 KSFDDLARILTRSISGIRLFLFGSSVNSMALKNSDIDVCANLK--RNDEKLIFIISSILK 645
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ + + I + ++VP++KF D+ + + +DL NN++ + N+ L+ Y+
Sbjct: 646 KNGYENIVTISQ------SRVPLIKFFDAKYDIHIDLCINNLLAIENSRLIKSYS 694
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 215 (80.7 bits), Expect = 8.1e-16, P = 8.1e-16
Identities = 55/147 (37%), Positives = 85/147 (57%)
Query: 98 EVDLNCNNVVGVRNTHL--LYCYAQK--IFKKADL-IHAKVPILKFQDSSFKLEVDLNCN 152
++D+N ++ THL +Y Y + ++K + AKVPI++F++ S + D+ N
Sbjct: 2233 DLDINFSSTQKEDTTHLKQVYKYLNRSQLYKLIEKRTDAKVPIIRFKEISSGVHFDMCFN 2292
Query: 153 NVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQC 212
+++ N+ LL Y +D R R LVLLVK WA + ++N+A T SS+ MVIHFLQ
Sbjct: 2293 SMMSYHNSLLLGEYCSIDNRSRDLVLLVKWWAVSKDLNNAAEKTFSSFCLVNMVIHFLQ- 2351
Query: 213 GTSPPVLPNLVA---QYPTKFSPNSNI 236
+PP+LPNL Q K+S N N+
Sbjct: 2352 SLNPPILPNLQTTSNQLLEKYSTNRNL 2378
>UNIPROTKB|F1MSM5 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0000287 "magnesium ion
binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0030145 GO:GO:0071044 GO:GO:0004652
InterPro:IPR002058 GeneTree:ENSGT00550000074490 GO:GO:0002134
CTD:55149 OMA:VRCWARA EMBL:DAAA02035653 EMBL:DAAA02035652
IPI:IPI00717138 RefSeq:XP_002692192.2 RefSeq:XP_588743.5
UniGene:Bt.64250 PRIDE:F1MSM5 Ensembl:ENSBTAT00000005760
GeneID:511412 KEGG:bta:511412 Uniprot:F1MSM5
Length = 583
Score = 189 (71.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 36/96 (37%), Positives = 62/96 (64%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
+++A+ P+++F + + DL NN + ++++ LLY Y +D R+R LV V+ WA+AH
Sbjct: 307 ILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYMYGALDSRVRALVFSVRCWARAH 366
Query: 188 NINDA-KNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
++ + I+++S T+MVI FLQ SPP+LP L
Sbjct: 367 SLTSSIPGAWITNFSLTMMVIFFLQ-RRSPPILPTL 401
Score = 39 (18.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 21 VRLFVVGSTMTGFGLDSSDVDMCLGI 46
VR F GS++ FG D+DM L +
Sbjct: 229 VRPF--GSSVNSFGKLGCDLDMFLDL 252
>MGI|MGI:1914690 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000287 "magnesium ion binding" evidence=ISO]
[GO:0002134 "UTP binding" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0030145 "manganese ion
binding" evidence=ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO]
MGI:MGI:1914690 Pfam:PF03828 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0000287
GO:GO:0006378 GO:GO:0006351 GO:GO:0003723 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 CTD:55149
HOGENOM:HOG000115438 HOVERGEN:HBG082104 OMA:VRCWARA
OrthoDB:EOG45TCN5 EMBL:AK011546 EMBL:AK076565 EMBL:AK135537
EMBL:BC057643 IPI:IPI00459344 RefSeq:NP_080433.1 UniGene:Mm.49826
ProteinModelPortal:Q9D0D3 SMR:Q9D0D3 PhosphoSite:Q9D0D3
PaxDb:Q9D0D3 PRIDE:Q9D0D3 Ensembl:ENSMUST00000025077 GeneID:67440
KEGG:mmu:67440 UCSC:uc008dyi.1 InParanoid:Q9D0D3 NextBio:324570
Bgee:Q9D0D3 CleanEx:MM_PAPD1 Genevestigator:Q9D0D3
GermOnline:ENSMUSG00000024234 Uniprot:Q9D0D3
Length = 585
Score = 190 (71.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 36/96 (37%), Positives = 61/96 (63%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
+++A+ P+++F + DL NN + ++++ LLY Y +D R+R LV V+ WA+AH
Sbjct: 308 ILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFSVRCWARAH 367
Query: 188 NINDA-KNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
++ + I+++S T+MVI FLQ SPP+LP L
Sbjct: 368 SLTSSIPGAWITNFSLTVMVIFFLQ-RRSPPILPTL 402
Score = 36 (17.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 27 GSTMTGFGLDSSDVDMCLGI 46
GS++ FG D+DM L +
Sbjct: 234 GSSVNTFGKLGCDLDMFLDL 253
>RGD|1310900 [details] [associations]
symbol:Mtpap "mitochondrial poly(A) polymerase" species:10116
"Rattus norvegicus" [GO:0000287 "magnesium ion binding"
evidence=IEA;ISO] [GO:0002134 "UTP binding" evidence=IEA;ISO]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA;ISO] [GO:0006378 "mRNA polyadenylation"
evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IEA;ISO] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF03828 RGD:1310900 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0000287 GO:GO:0006378
GO:GO:0030145 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
OrthoDB:EOG45TCN5 IPI:IPI00366610 Ensembl:ENSRNOT00000022462
UCSC:RGD:1310900 Uniprot:D3ZPN5
Length = 584
Score = 189 (71.6 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 36/96 (37%), Positives = 61/96 (63%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
+++A+ P+++F + DL NN + ++++ LLY Y +D R+R LV V+ WA+AH
Sbjct: 308 ILNARCPLVRFSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFGVRCWARAH 367
Query: 188 NINDA-KNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
++ + I+++S T+MVI FLQ SPP+LP L
Sbjct: 368 SLTSSIPGAWITNFSLTMMVIFFLQ-RRSPPILPTL 402
Score = 36 (17.7 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 27 GSTMTGFGLDSSDVDMCLGI 46
GS++ FG D+DM L +
Sbjct: 234 GSSVNTFGKLGCDLDMFLDL 253
>UNIPROTKB|E2RCU9 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0006378 "mRNA polyadenylation" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0002134 "UTP binding" evidence=IEA] [GO:0000287
"magnesium ion binding" evidence=IEA] Pfam:PF03828 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0000287 GO:GO:0006378 GO:GO:0030145 GO:GO:0071044
GO:GO:0004652 InterPro:IPR002058 GeneTree:ENSGT00550000074490
GO:GO:0002134 CTD:55149 OMA:VRCWARA EMBL:AAEX03001227
RefSeq:XP_535150.2 Ensembl:ENSCAFT00000006387 GeneID:477963
KEGG:cfa:477963 Uniprot:E2RCU9
Length = 584
Score = 186 (70.5 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 34/96 (35%), Positives = 62/96 (64%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
+++A+ P+++F + + DL NN + ++++ LLY Y +D R+R +V ++ WA+AH
Sbjct: 307 ILNARCPLVRFSHQASGFQCDLTTNNRIALKSSELLYIYGALDSRVRAMVFSIRCWARAH 366
Query: 188 NINDA-KNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
++ + I+++S T+MVI FLQ SPP+LP L
Sbjct: 367 SLTSSIPGSWITNFSLTMMVIFFLQ-RRSPPILPTL 401
Score = 39 (18.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 21 VRLFVVGSTMTGFGLDSSDVDMCLGI 46
VR F GS++ FG D+DM L +
Sbjct: 229 VRPF--GSSVNSFGKLGCDLDMFLDL 252
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 209 (78.6 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 53/147 (36%), Positives = 85/147 (57%)
Query: 98 EVDLNCNNVVGVRNTHL--LYCYAQK--IFKKADL-IHAKVPILKFQDSSFKLEVDLNCN 152
++D+N ++ THL +Y Y + ++K + I AKVPI++F++ S + D+ +
Sbjct: 2024 DLDINFSSTQKEDTTHLKQVYKYLNRSQLYKLIEKRISAKVPIIRFKEISSGIHFDMCFH 2083
Query: 153 NVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQC 212
+++ N+ LL Y +D R R L LLVK WA + ++N+A T SS+ MVIHFLQ
Sbjct: 2084 SMMSYHNSLLLGEYCSIDKRCRDLALLVKWWAVSKDLNNAAEKTFSSFCLVNMVIHFLQ- 2142
Query: 213 GTSPPVLPNLVA---QYPTKFSPNSNI 236
+PP+LPNL Q K+S + N+
Sbjct: 2143 SLNPPILPNLQTTSNQLLEKYSTDRNL 2169
>POMBASE|SPBC1685.06 [details] [associations]
symbol:cid11 "poly(A) polymerase Cid11 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 PomBase:SPBC1685.06 Pfam:PF03828 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GO:GO:0006397 GenomeReviews:CU329671_GR GO:GO:0003723 PIR:T39522
RefSeq:NP_595210.1 ProteinModelPortal:O74326
EnsemblFungi:SPBC1685.06.1 GeneID:2539762 KEGG:spo:SPBC1685.06
eggNOG:COG5260 OMA:ENNACER OrthoDB:EOG46QB1M NextBio:20800912
GO:GO:0004652 InterPro:IPR002058 Uniprot:O74326
Length = 478
Score = 198 (74.8 bits), Expect = 4.8e-15, P = 4.8e-15
Identities = 44/111 (39%), Positives = 67/111 (60%)
Query: 114 LLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRI 173
LLY Y K + + A+VPI+K D F + DLN NN V NT +L + +D R+
Sbjct: 128 LLYSYGMK--QIVCVSRARVPIVKIWDPQFDIHCDLNINNDVAKINTKMLRLFVSIDPRV 185
Query: 174 RPLVLLVKLWAQAHNINDAKNM-TISSYSFTLMVIHFLQCGTSPPVLPNLV 223
RPL L++K WA+ + DA TI+SY+ + M+++FLQ +PP+LP ++
Sbjct: 186 RPLGLIIKYWAKQRALCDAAGSGTITSYTISCMLVNFLQT-RNPPILPAML 235
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 210 (79.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 42/102 (41%), Positives = 64/102 (62%)
Query: 129 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHN 188
+ A+VPI++F D+ + D+ N+ +G N+ L+ Y +D R++PL++L+K WA
Sbjct: 4304 LEARVPIIRFIDTDVNVRFDMCFNSFMGQHNSLLIKDYTMVDSRVKPLIILIKWWASTKC 4363
Query: 189 INDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKF 230
+NDA + SSY ++IHFLQ SPPVLPNL Q P+ F
Sbjct: 4364 LNDASQESFSSYCLINLIIHFLQ-SLSPPVLPNL--QEPSPF 4402
>TAIR|locus:2102709 [details] [associations]
symbol:AT3G45750 "AT3G45750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GO:GO:0016740 eggNOG:COG5260
EMBL:BT008622 EMBL:AK229682 IPI:IPI00523946 RefSeq:NP_190161.2
UniGene:At.35992 ProteinModelPortal:Q7Y216 SMR:Q7Y216
EnsemblPlants:AT3G45750.1 GeneID:823717 KEGG:ath:AT3G45750
TAIR:At3g45750 InParanoid:Q7Y216 OMA:WREEERY PhylomeDB:Q7Y216
ProtClustDB:CLSN2680887 ArrayExpress:Q7Y216 Genevestigator:Q7Y216
Uniprot:Q7Y216
Length = 682
Score = 197 (74.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 60/200 (30%), Positives = 99/200 (49%)
Query: 35 LDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKADLIHAKVP-ILKFQDS 93
LD D+ RP D ++ L T +D+ + + + ++ A ++ S
Sbjct: 43 LDKVLNDVYCSFRPVSADYNTRKELVKNLNTMALDIYGKSEESSPVLEAYGSFVMDMYSS 102
Query: 94 SFKLEVDLNCNN----VVGVRNTHLLYCYAQKI--------FKKADLIH-AKVPILKFQD 140
L+V +N N + + +L +A+K+ K + I AKVPI+KF D
Sbjct: 103 QSDLDVSINFGNGTSEIPREKKLEILKRFAKKLRSLQGEGQVKNVESIFSAKVPIVKFSD 162
Query: 141 SSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSY 200
+E DL+ N G+ N+ ++ +Q+D R + L LLVK WA+AH +N A + T++S
Sbjct: 163 QGTGVECDLSVENKDGILNSQIVRIISQIDGRFQKLCLLVKHWAKAHEVNSALHRTLNSV 222
Query: 201 SFTLMVIHFLQCGTSPPVLP 220
S TL+V LQ +PP+LP
Sbjct: 223 SITLLVALHLQT-QNPPILP 241
>RGD|1586015 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA;ISO] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISO] [GO:0071044
"histone mRNA catabolic process" evidence=ISO] InterPro:IPR001878
InterPro:IPR002934 InterPro:IPR015880 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 SMART:SM00355 Pfam:PF03828
RGD:1586015 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GO:GO:0031123 OrthoDB:EOG40VVNP IPI:IPI00211280
Ensembl:ENSRNOT00000067726 UCSC:RGD:1586015 ArrayExpress:D3ZL68
Uniprot:D3ZL68
Length = 1485
Score = 198 (74.8 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 43/107 (40%), Positives = 67/107 (62%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL+ Y+ +D R++ L +K++ + +I
Sbjct: 1095 AKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYSAIDPRVKYLCYTMKVFTKMCDIG 1154
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ SPPV+P L Y + P +D
Sbjct: 1155 DASRGSLSSYAYTLMVLYFLQ-QRSPPVIPVLQEIYKGEKKPEILVD 1200
Score = 129 (50.5 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/111 (31%), Positives = 55/111 (49%)
Query: 13 FTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCL 72
F +D +L + GS+ GFG SD+D+C+ I +E G + CV ++ L
Sbjct: 1025 FIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEG----LDCVRTIEELARVL 1080
Query: 73 E----IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ + AKVPI+KF LEVD++ N + + NT LL+ Y+
Sbjct: 1081 RKHSGLRNILPITTAKVPIVKFSHLRSGLEVDISLYNTLALHNTRLLFAYS 1131
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00098
Identities = 60/237 (25%), Positives = 103/237 (43%)
Query: 3 LSKAVEEYVRFTLRDPAHVRLFVVGSTMTG----FGLDSSDVDMCLGIRPYEFDRGQAIR 58
L + EE + TL PA ++ VGS + FGL + ++D L I+ + Q
Sbjct: 272 LKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHNENLDQRLEIKCAMENVFQHKL 331
Query: 59 VLCVLETSDVDMCLEI-FKKADL-IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLY 116
C L C + F+ +D+ I + P + Q L + C ++N+
Sbjct: 332 PDCSLRLYG-SSCSRLGFRDSDVNIDVQFPAVMSQPDVLLLVQE--C-----LKNSD--- 380
Query: 117 CYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPL 176
C+ I AD HA+VP++ + L ++ N T L +++ R+ PL
Sbjct: 381 CF---IDVDADF-HARVPVVVCRHKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRLLPL 436
Query: 177 VLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPN 233
V+ + WA+ +I+ + + Y F LM + FLQ P+LP + + +FS N
Sbjct: 437 VIAFRYWAKLCSIDRPEEGGLPPYVFALMAVFFLQ-QRKEPLLPVYLGSWIEEFSLN 492
>UNIPROTKB|E1C833 [details] [associations]
symbol:PAPD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004652 "polynucleotide adenylyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043631 "RNA
polyadenylation" evidence=IEA] [GO:0071044 "histone mRNA catabolic
process" evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GO:GO:0043631 GeneTree:ENSGT00550000074490 OMA:NQKTEAR
EMBL:AADN02046111 EMBL:AADN02046112 EMBL:AADN02046113
EMBL:AADN02046114 EMBL:AADN02046115 EMBL:AADN02046116
IPI:IPI00587880 Ensembl:ENSGALT00000023911 Uniprot:E1C833
Length = 496
Score = 191 (72.3 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIRPYEFD-RGQAIRVLCVLETSDVDMCLEIFKKADL 80
RLF+VGS++ GFG +SD D+CL I+ + + +A +L +++ ++ L
Sbjct: 212 RLFLVGSSLNGFGTRTSDGDLCLVIKEEPVNQKTEARHILSLVQKLFSTKLSSYIERPQL 271
Query: 81 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
I AKVPI+KF+D +E DLN NN+VG+RNT LL YA
Sbjct: 272 IRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYA 310
Score = 172 (65.6 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 40/119 (33%), Positives = 63/119 (52%)
Query: 124 KKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA-QMDWRIRPLVLLVKL 182
++ LI AKVPI+KF+D +E DLN NN+VG+RNT LL YA + + L +
Sbjct: 267 ERPQLIRAKVPIVKFRDKVSCVEFDLNVNNIVGIRNTFLLRTYAYNYENSVHMLKHSTSV 326
Query: 183 WAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNIDNIQE 241
W++ + +A T + LMV+ ++ P+LP+L YP F P + + +
Sbjct: 327 WSR-RALPEAARTTAENSRLLLMVLVYV-VALPEPILPSLQKNYPESFDPTMQLHLVHQ 383
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 198 (74.8 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 52/136 (38%), Positives = 72/136 (52%)
Query: 92 DSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNC 151
D +FK+ + N + V + +L I +K + A VPI++F + S K D++C
Sbjct: 398 DVNFKINQNENQVTHLEVVSKYLESTKLYTIIEKR--LSATVPIIRFVEKSSKYHFDMSC 455
Query: 152 NNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQ 211
N+ N+ LL Y +D R L LLVK WA N+NDA T SS+ MVIHFLQ
Sbjct: 456 NSSKAYFNSLLLKEYCSIDNRYIILSLLVKWWASCKNLNDASKHTFSSFCLVNMVIHFLQ 515
Query: 212 CGTSPPVLPNLVAQYP 227
S P+LPNL + P
Sbjct: 516 -SISTPILPNLQTKSP 530
>UNIPROTKB|Q2KEW4 [details] [associations]
symbol:MGCH7_ch7g922 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
EMBL:CM000230 InterPro:IPR002058 GO:GO:0016779
ProteinModelPortal:Q2KEW4 Uniprot:Q2KEW4
Length = 1474
Score = 197 (74.4 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/100 (43%), Positives = 60/100 (60%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+K D L D+N NN + + NT ++ Y ++D R+R L ++VK W + IN
Sbjct: 523 AKVPIVKIWDPELGLACDMNVNNTLALENTRMVLTYVEIDERVRTLAMIVKHWTRRRTIN 582
Query: 191 DAK-NMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTK 229
DA T+SSY++ M+I FLQ PP+LP L Q P K
Sbjct: 583 DAAFGGTLSSYTWICMIIAFLQL-RDPPILPAL-HQNPHK 620
>UNIPROTKB|Q9NVV4 [details] [associations]
symbol:MTPAP "Poly(A) RNA polymerase, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0071044 "histone mRNA
catabolic process" evidence=IMP] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0002134 "UTP binding" evidence=IDA] [GO:0005524
"ATP binding" evidence=IDA] [GO:0006378 "mRNA polyadenylation"
evidence=IDA] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0008219 GO:GO:0006378
GO:GO:0006351 GO:GO:0003723 EMBL:CH471072 GO:GO:0030145
GO:GO:0071044 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0002134 EMBL:AL161651 EMBL:AB194709 EMBL:AY364242
EMBL:AK001348 EMBL:AK022188 EMBL:AL122121 EMBL:AL353796
EMBL:BC061703 IPI:IPI00153051 IPI:IPI00470416 RefSeq:NP_060579.3
UniGene:Hs.173946 PDB:3PQ1 PDBsum:3PQ1 ProteinModelPortal:Q9NVV4
SMR:Q9NVV4 IntAct:Q9NVV4 STRING:Q9NVV4 PhosphoSite:Q9NVV4
DMDM:74753002 PaxDb:Q9NVV4 PRIDE:Q9NVV4 Ensembl:ENST00000263063
Ensembl:ENST00000358107 GeneID:55149 KEGG:hsa:55149 UCSC:uc001iva.4
UCSC:uc001ivb.4 CTD:55149 GeneCards:GC10M030598 HGNC:HGNC:25532
HPA:HPA038620 MIM:613669 MIM:613672 neXtProt:NX_Q9NVV4
PharmGKB:PA164723192 HOGENOM:HOG000115438 HOVERGEN:HBG082104
OMA:VRCWARA OrthoDB:EOG45TCN5 PhylomeDB:Q9NVV4
EvolutionaryTrace:Q9NVV4 GenomeRNAi:55149 NextBio:58876
ArrayExpress:Q9NVV4 Bgee:Q9NVV4 Genevestigator:Q9NVV4
GermOnline:ENSG00000107951 Uniprot:Q9NVV4
Length = 582
Score = 191 (72.3 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 52/184 (28%), Positives = 97/184 (52%)
Query: 43 CLGIRPYEFDRGQAIRVLCVLETSDVDMCLEIFKKADLIHAKVP---ILKFQDSSFKLEV 99
C+ +RP+ G ++ L D+DM L++ + +L K+ +++FQ + E
Sbjct: 225 CI-VRPF----GSSVNTFGKLGC-DLDMFLDLDETRNLSAHKISGNFLMEFQVKNVPSE- 277
Query: 100 DLNCNNVVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRN 159
+ ++ V L + + +++A+ P+++F + + DL NN + + +
Sbjct: 278 RIATQKILSVLGECLDH-FGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALTS 336
Query: 160 THLLYCYAQMDWRIRPLVLLVKLWAQAHNINDA-KNMTISSYSFTLMVIHFLQCGTSPPV 218
+ LLY Y +D R+R LV V+ WA+AH++ + I+++S T+MVI FLQ SPP+
Sbjct: 337 SELLYIYGALDSRVRALVFSVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQ-RRSPPI 395
Query: 219 LPNL 222
LP L
Sbjct: 396 LPTL 399
>DICTYBASE|DDB_G0278425 [details] [associations]
symbol:DDB_G0278425 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0278425 Pfam:PF03828 EMBL:AAFI02000023
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_642359.1
EnsemblProtists:DDB0205447 GeneID:8621564 KEGG:ddi:DDB_G0278425
InParanoid:Q54Y43 OMA:TEESINT Uniprot:Q54Y43
Length = 1090
Score = 192 (72.6 bits), Expect = 8.3e-14, P = 8.3e-14
Identities = 40/92 (43%), Positives = 60/92 (65%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
A+VPI+KF+D + L D+ NN + + NT L+ Y+ +D R++PLV +VK WA+ IN
Sbjct: 851 ARVPIVKFKDPNTGLSCDICMNNRLAIYNTRLVQDYSMIDERMKPLVYVVKRWAKRRKIN 910
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
+ T+SSY++ +VI FLQ PP+LP L
Sbjct: 911 EPSLGTLSSYAYINLVISFLQT-RQPPILPCL 941
>TAIR|locus:2102714 [details] [associations]
symbol:AT3G45760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GO:GO:0016740 IPI:IPI00532663 RefSeq:NP_190162.4
UniGene:At.53771 ProteinModelPortal:F4J6R3 SMR:F4J6R3
EnsemblPlants:AT3G45760.1 GeneID:823719 KEGG:ath:AT3G45760
OMA:NTMSIAS Uniprot:F4J6R3
Length = 474
Score = 186 (70.5 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 36/93 (38%), Positives = 60/93 (64%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
++ A+VPI++F D +E DL + G+ + ++ +Q+D R + L LL+K WA+AH
Sbjct: 150 ILSARVPIVRFCDQGTGIECDLTVESKDGILTSQIIRIISQIDDRFQKLCLLIKHWARAH 209
Query: 188 NINDAKNMTISSYSFTLMVIHFLQCGTSPPVLP 220
+N+A + T++S S T++V H LQ SPP+LP
Sbjct: 210 GVNNASHNTLNSISITMLVAHHLQT-QSPPILP 241
>WB|WBGene00003499 [details] [associations]
symbol:mut-2 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0000335 "negative regulation
of transposition, DNA-mediated" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0009792 GO:GO:0048471 GO:GO:0016246
GO:GO:0045132 EMBL:FO081226 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00550000074490 GO:GO:0000335 PIR:H87803
RefSeq:NP_491834.1 ProteinModelPortal:O44768 DIP:DIP-27246N
MINT:MINT-1113744 STRING:O44768 PaxDb:O44768 PRIDE:O44768
EnsemblMetazoa:K04F10.6a GeneID:187005 KEGG:cel:CELE_K04F10.6
UCSC:K04F10.6a CTD:187005 WormBase:K04F10.6a HOGENOM:HOG000019766
InParanoid:O44768 OMA:TWLFNIV NextBio:933748 ArrayExpress:O44768
Uniprot:O44768
Length = 441
Score = 174 (66.3 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 36/97 (37%), Positives = 56/97 (57%)
Query: 128 LIHAKVPILKFQD-SSFKLEVDLNCNNVVG-VRNTHLLYCYAQMDWRIRPLVLLVKLWAQ 185
L+ A++ ILK ++ + + + + N+ L+ A +D R PL +VK WA
Sbjct: 170 LVQAQIQILKVMTVDGIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQWAA 229
Query: 186 AHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
+ + D K+ +SY+ L+VIHFLQCGT PP+LPNL
Sbjct: 230 STKVKDPKDGGFNSYALVLLVIHFLQCGTFPPILPNL 266
Score = 48 (22.0 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 27 GSTMTGFGLDSSDVDMCLGI 46
GST+TG +SD+D+ + I
Sbjct: 93 GSTVTGLATKNSDLDVAIHI 112
>UNIPROTKB|F1NYJ2 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
InterPro:IPR002058 GeneTree:ENSGT00550000074490 EMBL:AADN02064833
EMBL:AADN02064834 IPI:IPI00572679 Ensembl:ENSGALT00000020583
ArrayExpress:F1NYJ2 Uniprot:F1NYJ2
Length = 1330
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 72 LEIFKKADLIHAKVPILKFQDSSFKL-EVDLN-CNNVVGVRNTHLLYCY--AQKIFKKAD 127
LE F + + K+ + + F + DL+ C + G+ +L CY A ++ + +
Sbjct: 992 LENFIRLEFPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELGRFIN 1051
Query: 128 LIH-----------AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPL 176
L+ AKVPI+KF LEVD++ N + + NT LL YA +D R++ L
Sbjct: 1052 LMSKSLRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAIDPRVKYL 1111
Query: 177 VLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNI 236
+K++ + +I DA ++SSY++TLMV++FLQ +PPV+P L Y P +
Sbjct: 1112 CYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKEPKKPEILV 1170
Query: 237 D 237
D
Sbjct: 1171 D 1171
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 7 VEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVL-CVLET 65
+E ++R L P +L + GS+ GFG SD+D+C+ + D + +L C
Sbjct: 992 LENFIR--LEFPG-TKLNLFGSSKNGFGFKQSDLDICMTM-----DGLETAEILPCYKTA 1043
Query: 66 SDVDMCLEIFKKA-----DLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
S++ + + K+ + AKVPI+KF LEVD++ N + + NT LL YA
Sbjct: 1044 SELGRFINLMSKSLRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYA 1102
>POMBASE|SPAC19D5.03 [details] [associations]
symbol:cid1 "poly(A) polymerase Cid1" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IMP] [GO:0043631 "RNA
polyadenylation" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050265 "RNA uridylyltransferase activity"
evidence=IDA] [GO:0071076 "RNA 3' uridylation" evidence=IDA]
InterPro:IPR002934 Pfam:PF01909 PomBase:SPAC19D5.03 Pfam:PF03828
GO:GO:0005829 EMBL:CU329670 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0033314
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0043631 EMBL:AF105076
PIR:T37963 RefSeq:NP_594901.1 PDB:4E7X PDB:4E80 PDB:4E8F PDB:4EP7
PDB:4FH3 PDB:4FH5 PDB:4FHP PDB:4FHV PDB:4FHW PDB:4FHX PDB:4FHY
PDBsum:4E7X PDBsum:4E80 PDBsum:4E8F PDBsum:4EP7 PDBsum:4FH3
PDBsum:4FH5 PDBsum:4FHP PDBsum:4FHV PDBsum:4FHW PDBsum:4FHX
PDBsum:4FHY ProteinModelPortal:O13833 STRING:O13833
EnsemblFungi:SPAC19D5.03.1 GeneID:2542420 KEGG:spo:SPAC19D5.03
OMA:DMARIRG OrthoDB:EOG4S7P0J NextBio:20803478 GO:GO:0050265
GO:GO:0071076 Uniprot:O13833
Length = 405
Score = 184 (69.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 123 FKKADLIHAKVPILKFQDSS---F--KLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLV 177
F+ L A++PI+K + F + D+ NN + + NT LL Y ++D R++P+V
Sbjct: 130 FEGKFLQRARIPIIKLTSDTKNGFGASFQCDIGFNNRLAIHNTLLLSSYTKLDARLKPMV 189
Query: 178 LLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTK 229
LLVK WA+ IN T+SSY + LMV+++L PPV PNL+ P K
Sbjct: 190 LLVKHWAKRKQINSPYFGTLSSYGYVLMVLYYLIHVIKPPVFPNLLLS-PLK 240
>UNIPROTKB|F1NJM6 [details] [associations]
symbol:LOC100857368 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031123 "RNA
3'-end processing" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0031123 OMA:KYFALPH
EMBL:AADN02064833 EMBL:AADN02064834 IPI:IPI00681958
Ensembl:ENSGALT00000033908 ArrayExpress:F1NJM6 Uniprot:F1NJM6
Length = 1477
Score = 192 (72.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 72 LEIFKKADLIHAKVPILKFQDSSFKL-EVDLN-CNNVVGVRNTHLLYCY--AQKIFKKAD 127
LE F + + K+ + + F + DL+ C + G+ +L CY A ++ + +
Sbjct: 1011 LENFIRLEFPGTKLNLFGSSKNGFGFKQSDLDICMTMDGLETAEILPCYKTASELGRFIN 1070
Query: 128 LIH-----------AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPL 176
L+ AKVPI+KF LEVD++ N + + NT LL YA +D R++ L
Sbjct: 1071 LMSKSLRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYAAIDPRVKYL 1130
Query: 177 VLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNI 236
+K++ + +I DA ++SSY++TLMV++FLQ +PPV+P L Y P +
Sbjct: 1131 CYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKEPKKPEILV 1189
Query: 237 D 237
D
Sbjct: 1190 D 1190
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 37/119 (31%), Positives = 60/119 (50%)
Query: 7 VEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVL-CVLET 65
+E ++R L P +L + GS+ GFG SD+D+C+ + D + +L C
Sbjct: 1011 LENFIR--LEFPG-TKLNLFGSSKNGFGFKQSDLDICMTM-----DGLETAEILPCYKTA 1062
Query: 66 SDVDMCLEIFKKA-----DLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
S++ + + K+ + AKVPI+KF LEVD++ N + + NT LL YA
Sbjct: 1063 SELGRFINLMSKSLRNVLPITTAKVPIVKFFHVRSGLEVDISLYNTLALHNTRLLSSYA 1121
>MGI|MGI:2387179 [details] [associations]
symbol:Zcchc6 "zinc finger, CCHC domain containing 6"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR001878
InterPro:IPR015880 Pfam:PF00098 PROSITE:PS00028 PROSITE:PS50158
SMART:SM00343 SMART:SM00355 MGI:MGI:2387179 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
Gene3D:4.10.60.10 SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058
GO:GO:0050265 GO:GO:0031123 KO:K13291 CTD:79670 EMBL:BC023880
EMBL:BC043111 EMBL:BC023438 EMBL:AK031043 IPI:IPI00262966
RefSeq:NP_705766.3 UniGene:Mm.233082 ProteinModelPortal:Q5BLK4
SMR:Q5BLK4 PhosphoSite:Q5BLK4 PaxDb:Q5BLK4 PRIDE:Q5BLK4
GeneID:214290 KEGG:mmu:214290 UCSC:uc007qvf.1 HOGENOM:HOG000155767
InParanoid:A1A4B1 OrthoDB:EOG40VVNP NextBio:374248
CleanEx:MM_ZCCHC6 Genevestigator:Q5BLK4
GermOnline:ENSMUSG00000035248 Uniprot:Q5BLK4
Length = 1491
Score = 190 (71.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/107 (40%), Positives = 66/107 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1098 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1157
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ SPPV+P L Y + P +D
Sbjct: 1158 DASRGSLSSYAYTLMVLYFLQ-QRSPPVIPVLQEIYKGEKKPEILVD 1203
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 3 LSKAVEEYVRFTLRDPAHVRLFVVGSTMTG----FGLDSSDVDMCLGIRPYEFDRGQAIR 58
L + EE + TL PA ++ VGS + FGL S ++D L I+ R
Sbjct: 272 LKEKQEEELLTTLPPPAPSQIHAVGSAIDRVVQEFGLHSENLDQRLEIK----------R 321
Query: 59 VL-CVLETSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLY- 116
V+ V D L ++ + L F+DS ++V V+ + LL
Sbjct: 322 VMESVFRHKLPDCSLRLYGSS------CSRLGFRDSDVNIDVQFPA--VMSQPDVLLLVQ 373
Query: 117 -CYAQK-IFKKADL-IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRI 173
C F D HA+VP++ +D L ++ N T L +++ R+
Sbjct: 374 ECLKNSDSFIDVDADFHARVPVVVCRDKQSGLLCKVSAGNENAWLTTKHLTALGKLEPRL 433
Query: 174 RPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPN 233
PLV+ + WA+ +I+ + + Y F LM + FLQ P+LP + + +FS N
Sbjct: 434 VPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAVFFLQ-QRKEPLLPVYLGSWIEEFSLN 492
Score = 121 (47.7 bits), Expect = 0.00034, P = 0.00034
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 13 FTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCL 72
F +D +L + GS+ GFG SD+D+C+ I +E G + CV ++ L
Sbjct: 1028 FIKQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEG----LDCVRTIEELARVL 1083
Query: 73 E----IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
+ + AKVPI+KF LEVD++ N + + NT LL Y+
Sbjct: 1084 RKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1134
>UNIPROTKB|F1S4J1 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 OMA:KYFALPH EMBL:CU694299 Ensembl:ENSSSCT00000011987
Uniprot:F1S4J1
Length = 1497
Score = 190 (71.9 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 42/107 (39%), Positives = 67/107 (62%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1105 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1164
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ +PPV+P L+ Y + P +D
Sbjct: 1165 DASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLLQIYKGEKKPEIFVD 1210
>UNIPROTKB|F1NBW0 [details] [associations]
symbol:MTPAP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000287 "magnesium ion binding" evidence=IEA]
[GO:0002134 "UTP binding" evidence=IEA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006378 "mRNA polyadenylation" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0071044
"histone mRNA catabolic process" evidence=IEA] Pfam:PF03828
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0000287 GO:GO:0006378 GO:GO:0030145
GO:GO:0071044 GO:GO:0004652 InterPro:IPR002058
GeneTree:ENSGT00550000074490 GO:GO:0002134 OMA:VRCWARA
EMBL:AADN02000527 EMBL:AADN02000528 IPI:IPI00597569
Ensembl:ENSGALT00000011888 Uniprot:F1NBW0
Length = 518
Score = 176 (67.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 33/96 (34%), Positives = 59/96 (61%)
Query: 128 LIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAH 187
+++A+ P++KF + DL+ +N + +R + LLY Y +D R+R LV ++ WA+ H
Sbjct: 249 ILNARCPLVKFSHQPTGFQCDLSVSNSIAIRCSELLYIYGCLDPRVRALVFSLRCWARVH 308
Query: 188 NI-NDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
+ N I+++S T+M++ FLQ SPP++P L
Sbjct: 309 GLTNSVPGTWITNFSLTMMIMFFLQ-KRSPPIIPTL 343
Score = 40 (19.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 7 VEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCL 44
V ++ R D V+ F GS++ FG DVDM L
Sbjct: 158 VRDFARAYFPDST-VKPF--GSSVNTFGKLGCDVDMFL 192
>UNIPROTKB|Q5VYS8 [details] [associations]
symbol:ZCCHC6 "Terminal uridylyltransferase 7" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] [GO:0031123 "RNA 3'-end
processing" evidence=IDA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS00028 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265
EMBL:AL137849 GO:GO:0031123 KO:K13291 EMBL:AL832026 EMBL:AL832193
EMBL:BX641077 EMBL:CR933643 EMBL:CR933644 EMBL:CR936608
EMBL:AL353678 EMBL:BC032456 EMBL:AK023471 EMBL:AK055546
EMBL:AK055948 EMBL:AB051498 IPI:IPI00336000 IPI:IPI00374531
IPI:IPI00552923 IPI:IPI00604491 IPI:IPI00604635 IPI:IPI00604680
RefSeq:NP_001171988.1 RefSeq:NP_001172003.1 RefSeq:NP_078893.2
UniGene:Hs.597057 ProteinModelPortal:Q5VYS8 SMR:Q5VYS8
IntAct:Q5VYS8 PhosphoSite:Q5VYS8 DMDM:67462100 PaxDb:Q5VYS8
PRIDE:Q5VYS8 DNASU:79670 Ensembl:ENST00000277141
Ensembl:ENST00000375957 Ensembl:ENST00000375960
Ensembl:ENST00000375961 Ensembl:ENST00000375963 GeneID:79670
KEGG:hsa:79670 UCSC:uc004aoq.3 UCSC:uc004aot.3 UCSC:uc004aov.3
UCSC:uc004aow.3 CTD:79670 GeneCards:GC09M088902 H-InvDB:HIX0008144
HGNC:HGNC:25817 HPA:HPA020615 HPA:HPA020620 neXtProt:NX_Q5VYS8
PharmGKB:PA134971144 InParanoid:Q5VYS8 OMA:KYFALPH ChiTaRS:ZCCHC6
GenomeRNAi:79670 NextBio:68893 ArrayExpress:Q5VYS8 Bgee:Q5VYS8
CleanEx:HS_ZCCHC6 Genevestigator:Q5VYS8 GermOnline:ENSG00000083223
Uniprot:Q5VYS8
Length = 1495
Score = 188 (71.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 57/180 (31%), Positives = 93/180 (51%)
Query: 72 LEIFKKADLIHAKVPILKFQDSSFKL-EVDLN-CNNVVGVRNTHLLYCY------AQKIF 123
LE F + D K+ + + F + DL+ C + G+ L C A+ +
Sbjct: 1029 LESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEGLDCVRTIEELARVLR 1088
Query: 124 KKADLIH------AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLV 177
K + L + AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L
Sbjct: 1089 KHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLC 1148
Query: 178 LLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
+K++ + +I DA ++SSY++TLMV++FLQ +PPV+P L Y + P +D
Sbjct: 1149 YTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKGEKKPEIFVD 1207
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 36/117 (30%), Positives = 57/117 (48%)
Query: 7 VEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETS 66
+E ++R +D +L + GS+ GFG SD+D+C+ I E G + CV
Sbjct: 1029 LESFIR---QDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGLETAEG----LDCVRTIE 1081
Query: 67 DVDMCLE----IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
++ L + + AKVPI+KF LEVD++ N + + NT LL Y+
Sbjct: 1082 ELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYS 1138
>UNIPROTKB|E2RM29 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 EMBL:AAEX03000505 Ensembl:ENSCAFT00000002070
NextBio:20851989 Uniprot:E2RM29
Length = 1497
Score = 187 (70.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1104 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1163
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ +PPV+P L Y + P +D
Sbjct: 1164 DASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKGEKKPEIFVD 1209
>UNIPROTKB|K7GM92 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR002058
GeneTree:ENSGT00550000074490 EMBL:CU694299 RefSeq:XP_003130685.2
Ensembl:ENSSSCT00000035632 GeneID:100516638 Uniprot:K7GM92
Length = 1497
Score = 187 (70.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1105 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1164
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ +PPV+P L Y + P +D
Sbjct: 1165 DASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKGEKKPEIFVD 1210
>UNIPROTKB|E1BAR2 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050265 "RNA uridylyltransferase activity"
evidence=IEA] [GO:0031123 "RNA 3'-end processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0031123 KO:K13291 CTD:79670 OMA:KYFALPH EMBL:DAAA02023954
IPI:IPI00721027 RefSeq:NP_001192681.1 UniGene:Bt.42314
Ensembl:ENSBTAT00000002277 GeneID:513209 KEGG:bta:513209
NextBio:20870748 Uniprot:E1BAR2
Length = 1498
Score = 187 (70.9 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1105 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1164
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ +PPV+P L Y + P +D
Sbjct: 1165 DASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKGEKKPEIFVD 1210
>UNIPROTKB|J9P044 [details] [associations]
symbol:ZCCHC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 Pfam:PF03828
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR002058 GeneTree:ENSGT00550000074490
OMA:KYFALPH EMBL:AAEX03000505 Ensembl:ENSCAFT00000049711
Uniprot:J9P044
Length = 1542
Score = 187 (70.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 42/107 (39%), Positives = 66/107 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
AKVPI+KF LEVD++ N + + NT LL Y+ +D R++ L +K++ + +I
Sbjct: 1102 AKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIG 1161
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
DA ++SSY++TLMV++FLQ +PPV+P L Y + P +D
Sbjct: 1162 DASRGSLSSYAYTLMVLYFLQ-QRNPPVIPVLQEIYKGEKKPEIFVD 1207
>UNIPROTKB|E1C6A7 [details] [associations]
symbol:ZCCHC11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001816 "cytokine
production" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010587 "miRNA catabolic
process" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0031054 "pre-miRNA processing" evidence=IEA]
[GO:0031123 "RNA 3'-end processing" evidence=IEA] [GO:0031664
"regulation of lipopolysaccharide-mediated signaling pathway"
evidence=IEA] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0050265
"RNA uridylyltransferase activity" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
InterPro:IPR001878 InterPro:IPR002934 Pfam:PF00098 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0031054 GO:GO:0032088 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0010587 GO:GO:0031123 GO:GO:0031664 OMA:TDCRSNL
EMBL:AADN02012569 IPI:IPI00602900 Ensembl:ENSGALT00000017295
Uniprot:E1C6A7
Length = 1575
Score = 179 (68.1 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 53/160 (33%), Positives = 84/160 (52%)
Query: 90 FQDSSFKLEVDLNCNNVVGVRNTHLLYCYA-----QKIFKK-------ADLIHAKVPILK 137
F+DS ++D+ C + G N L C K+ KK + AKVPI+K
Sbjct: 969 FRDS----DLDI-CMTLEGHENAEKLNCKEIIEGLAKVLKKHPGLRNILPITTAKVPIVK 1023
Query: 138 FQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTI 197
F+ LE D++ N + NT +L YA +D R++ L +K++A+ +I DA ++
Sbjct: 1024 FEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSL 1083
Query: 198 SSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
SSY++ LMV++FLQ +PPV+P L + K P +D
Sbjct: 1084 SSYAYILMVLYFLQ-QRNPPVIPVLQEIFDGKQIPQRMVD 1122
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 130 HAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNI 189
HAKVP++ +D L ++ N V T LL +++ + PLVL + WA+ +I
Sbjct: 398 HAKVPVVFCKDIKSGLTCKVSARNDVACLTTDLLAALGKLEPVLIPLVLAFRYWAKLCHI 457
Query: 190 NDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNIDNIQEG 242
+ I SYSF LMVI FLQ PP+LP+ + + F D+ +G
Sbjct: 458 DCQAEGGIPSYSFALMVIFFLQ-QRKPPILPSYLGSWIEGFDSKKPDDHQLKG 509
Score = 120 (47.3 bits), Expect = 0.00048, P = 0.00048
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 6 AVEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLET 65
++E ++R D A + LF GS+ GFG SD+D+C+ + +E A ++ C
Sbjct: 942 SLERFIRKEYNDKARLCLF--GSSKNGFGFRDSDLDICMTLEGHE----NAEKLNC---K 992
Query: 66 SDVDMCLEIFKK-------ADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCY 118
++ ++ KK + AKVPI+KF+ LE D++ N + NT +L Y
Sbjct: 993 EIIEGLAKVLKKHPGLRNILPITTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATY 1052
Query: 119 A 119
A
Sbjct: 1053 A 1053
>WB|WBGene00019629 [details] [associations]
symbol:cid-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0071076 "RNA 3' uridylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P
granule" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR007087
InterPro:IPR015880 InterPro:IPR017896 PROSITE:PS00028
PROSITE:PS51379 SMART:SM00343 SMART:SM00355 Pfam:PF03828
GO:GO:0048471 GO:GO:0008270 GO:GO:0000003 GO:GO:0003676
GO:GO:0051536 GO:GO:0000794 Gene3D:4.10.60.10 GO:GO:0043186
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0050265 GO:GO:0071076
GeneTree:ENSGT00550000074490 EMBL:FO081618 PIR:C88451
RefSeq:NP_498099.1 ProteinModelPortal:Q09409 IntAct:Q09409
STRING:Q09409 PaxDb:Q09409 EnsemblMetazoa:K10D2.3 GeneID:175707
KEGG:cel:CELE_K10D2.3 UCSC:K10D2.3 CTD:175707 WormBase:K10D2.3
InParanoid:Q09409 OMA:CSDIDIC NextBio:889300 Uniprot:Q09409
Length = 1425
Score = 178 (67.7 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 88 LKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQ---DSSFK 144
L+F D + DL V+ + L C+ K + ++ AKVPI+KFQ +
Sbjct: 1072 LRFGDGDVPPK-DLTAKEVIQKTESVLRKCHLVK--RVQAIVTAKVPIVKFQVKLSNGAI 1128
Query: 145 LEVDLNCNNVVGVRNTHLLYCYAQM--DWRIRPLVLLVKLWAQAHNINDAKNMTISSYSF 202
++VD++ N++ + NT LL Y+ D R L L VK WA+ I DA ++SSY
Sbjct: 1129 IDVDISYYNILAIYNTALLKEYSLWTPDKRFAKLALFVKTWAKNCEIGDASRGSLSSYCH 1188
Query: 203 TLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNIDN 238
+M+I +LQ PPVLP L + + +DN
Sbjct: 1189 VIMLISYLQ-NCDPPVLPRLQEDFRSDNRERRLVDN 1223
Score = 117 (46.2 bits), Expect = 0.00094, P = 0.00094
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 7 VEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETS 66
++ ++R R+ V L GS MTG ++ SD+D+CL + + +T
Sbjct: 1037 LQSFLRKNYRED--VTLTTFGSVMTGLSVNCSDIDICLRFGDGDVPPKDLTAKEVIQKTE 1094
Query: 67 DVDMCLEIFKKAD-LIHAKVPILKFQ---DSSFKLEVDLNCNNVVGVRNTHLLYCYA 119
V + K+ ++ AKVPI+KFQ + ++VD++ N++ + NT LL Y+
Sbjct: 1095 SVLRKCHLVKRVQAIVTAKVPIVKFQVKLSNGAIIDVDISYYNILAIYNTALLKEYS 1151
>ZFIN|ZDB-GENE-050706-68 [details] [associations]
symbol:tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=IEA;ISS] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0006379 "mRNA cleavage" evidence=ISS]
[GO:0016607 "nuclear speck" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR007087 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 ZFIN:ZDB-GENE-050706-68
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058
GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:BC098614 IPI:IPI00619608
RefSeq:NP_001025359.1 UniGene:Dr.80967 ProteinModelPortal:Q4KMD7
GeneID:564388 KEGG:dre:564388 InParanoid:Q4KMD7 NextBio:20885359
ArrayExpress:Q4KMD7 Uniprot:Q4KMD7
Length = 797
Score = 171 (65.3 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+ K L A++P++KF L+ D+ NN + VRNT L + +D R+RPLV ++
Sbjct: 282 VHKVQALSTARLPVVKFSHKELNLQGDITINNRLAVRNTKFLQLCSGIDSRLRPLVYTIR 341
Query: 182 LWAQAHNINDAKNMT-----ISSYSFTLMVIHFLQCGTSPPVLPNL 222
LWA+ + A N++ +++Y+ TL+VI FLQ PPVLP++
Sbjct: 342 LWAKQKQL--AGNLSGPGPLLNNYALTLLVIFFLQ-NRDPPVLPSV 384
Score = 46 (21.3 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 27 GSTMTGFGLDSSDVDMCLGI 46
GS++ FGL S D+D+ L +
Sbjct: 204 GSSVNTFGLHSCDLDLFLDL 223
>WB|WBGene00019628 [details] [associations]
symbol:pup-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
Pfam:PF03828 GO:GO:0008340 GO:GO:0002009 GO:GO:0040010
eggNOG:COG5260 InterPro:IPR002058 EMBL:FO081618 PIR:D88451
RefSeq:NP_498100.1 ProteinModelPortal:Q09408 SMR:Q09408
DIP:DIP-48653N STRING:Q09408 EnsemblMetazoa:K10D2.2.1
EnsemblMetazoa:K10D2.2.2 GeneID:175708 KEGG:cel:CELE_K10D2.2
UCSC:K10D2.2.1 CTD:175708 WormBase:K10D2.2
GeneTree:ENSGT00700000105235 HOGENOM:HOG000017189 InParanoid:Q09408
OMA:MEADISY NextBio:889304 Uniprot:Q09408
Length = 508
Score = 174 (66.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/95 (38%), Positives = 59/95 (62%)
Query: 129 IHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMD-WRIRPLVLLVKLWAQAH 187
++AKVPI++F+ S +E D++ N + + NT LL Y + D R+ L + VK WA+
Sbjct: 226 VNAKVPIVRFRSSDMDMEADISYKNDLALHNTQLLQQYCKWDPERLPTLGVWVKAWAKRS 285
Query: 188 NINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNL 222
+ DA ++SSY++ +M+IH+LQ PVLP L
Sbjct: 286 GVGDASKGSLSSYAWIVMLIHYLQQVEPIPVLPCL 320
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 6 AVEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRG-QAIRVLCVLE 64
A+E V + V L + GST GFG DVDM L P + RV+ +
Sbjct: 152 ALEMQVHLSACFGCRVVLDIYGSTRNGFGTRFCDVDMSLSFSPSPPSWATNSDRVMRAVA 211
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL--YC 117
+ VD + ++ ++AKVPI++F+ S +E D++ N + + NT LL YC
Sbjct: 212 KALVDFPKAVDER--YVNAKVPIVRFRSSDMDMEADISYKNDLALHNTQLLQQYC 264
>MGI|MGI:1917294 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6
snRNA-specific" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006378 "mRNA polyadenylation"
evidence=ISO] [GO:0006379 "mRNA cleavage" evidence=ISO] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0050265 "RNA
uridylyltransferase activity" evidence=ISO] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
MGI:MGI:1917294 Pfam:PF03828 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB EMBL:AK138418 EMBL:BC023900
EMBL:BC025499 IPI:IPI00153749 IPI:IPI00798562 RefSeq:NP_932110.1
UniGene:Mm.165979 ProteinModelPortal:Q8R3F9 SMR:Q8R3F9
STRING:Q8R3F9 PhosphoSite:Q8R3F9 PaxDb:Q8R3F9 PRIDE:Q8R3F9
Ensembl:ENSMUST00000096239 GeneID:70044 KEGG:mmu:70044
UCSC:uc008gog.1 UCSC:uc008goh.1 InParanoid:Q8R3F9 OMA:EQQGCAG
NextBio:330881 Bgee:Q8R3F9 Genevestigator:Q8R3F9
GermOnline:ENSMUSG00000071645 Uniprot:Q8R3F9
Length = 869
Score = 158 (60.7 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L ++MD R+RPLV ++
Sbjct: 358 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALYNSRFLNLCSEMDGRVRPLVYTLR 417
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ HN +++Y+ TL+VI+FLQ PPVLP VAQ + ++
Sbjct: 418 CWAQ-HNGLSGGGPLLNNYALTLLVIYFLQT-RDPPVLPT-VAQLTQRAGEGEQVE 470
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 27 GSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLETSDVDMCL 72
GST+ F + D+D+ L + E + V ETS +D L
Sbjct: 204 GSTVNSFDVHGCDLDLFLDMGDMEETEPDP-KAPKVPETSSLDSAL 248
>UNIPROTKB|F1RPX0 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 Pfam:PF03828
GO:GO:0005730 GO:GO:0000166 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 OMA:EQQGCAG
EMBL:FP102338 EMBL:FP312617 Ensembl:ENSSSCT00000014279
Uniprot:F1RPX0
Length = 872
Score = 162 (62.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 36/116 (31%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV V+
Sbjct: 355 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTVR 414
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 415 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEGEQVE 467
>UNIPROTKB|H3BRB1 [details] [associations]
symbol:MIR3654 "Protein MIR3654" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS50102 SMART:SM00355 SMART:SM00360 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622
EMBL:AP001363 EMBL:AP002990 ProteinModelPortal:H3BRB1 SMR:H3BRB1
Ensembl:ENST00000496634 HGNC:HGNC:38896 Bgee:H3BRB1 Uniprot:H3BRB1
Length = 525
Score = 159 (61.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 355 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 414
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 415 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEGEQVE 467
>UNIPROTKB|F1MG03 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0005730 GO:GO:0000166
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0005847 GO:GO:0006379 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GeneTree:ENSGT00550000074490
GO:GO:0016180 IPI:IPI00705794 UniGene:Bt.21690 OMA:EQQGCAG
EMBL:DAAA02063485 Ensembl:ENSBTAT00000015724 Uniprot:F1MG03
Length = 871
Score = 161 (61.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 355 VYRVQTVPSARCPVVKFCHRPSGLHGDISLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 414
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +++Y+ TL+VI+FLQ PPVLP V+Q K +D
Sbjct: 415 CWAQGRGLSGSGPL-LNNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEQVEVD 467
>UNIPROTKB|Q1JPD6 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9913 "Bos taurus" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0016607 "nuclear
speck" evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0050265 "RNA uridylyltransferase
activity" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0006379
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:BT025417 IPI:IPI00705794 RefSeq:NP_001073791.1
UniGene:Bt.21690 ProteinModelPortal:Q1JPD6 SMR:Q1JPD6 STRING:Q1JPD6
GeneID:616339 KEGG:bta:616339 CTD:64852 HOVERGEN:HBG079670
InParanoid:Q1JPD6 OrthoDB:EOG480HWB NextBio:20900088 Uniprot:Q1JPD6
Length = 871
Score = 161 (61.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 355 VYRVQTVPSARCPVVKFCHRPSGLHGDISLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 414
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +++Y+ TL+VI+FLQ PPVLP V+Q K +D
Sbjct: 415 CWAQGRGLSGSGPL-LNNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEQVEVD 467
>POMBASE|SPAC17H9.01 [details] [associations]
symbol:cid16 "poly(A) polymerase Cid16 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004652
"polynucleotide adenylyltransferase activity" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002934 Pfam:PF01909
PomBase:SPAC17H9.01 Pfam:PF03828 GO:GO:0005737 EMBL:CU329670
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CU329670_GR
eggNOG:COG5260 GO:GO:0004652 InterPro:IPR002058 PIR:T37867
RefSeq:NP_593571.1 ProteinModelPortal:O13798
EnsemblFungi:SPAC17H9.01.1 GeneID:2542188 KEGG:spo:SPAC17H9.01
OrthoDB:EOG40W00S NextBio:20803258 Uniprot:O13798
Length = 1202
Score = 161 (61.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/101 (34%), Positives = 63/101 (62%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
A++PI+KF + + DL+ +N++ + N+ L+ Y+ +D R++ L++LVK WA I+
Sbjct: 976 ARIPIIKFT-GQYNIHCDLSFDNLLPIHNSDLILNYSLIDERVKTLLMLVKYWASNRLID 1034
Query: 191 DAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFS 231
+ SSY++ +MVI +LQ P+LPNL + T++S
Sbjct: 1035 KTHHAFPSSYTWCIMVIFYLQ-QIPEPILPNL-QKLSTQYS 1073
Score = 40 (19.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 17 DPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRP-YEFDRGQA--IRVLCVLETSDVDMCLE 73
D +H + ST+ G + + + P Y D A I +LC E + L+
Sbjct: 423 DSSHPLGKSITSTLQAIGTRKILTQLSINMIPRYNQDNCSAGDIYILCFSENCWLYSVLQ 482
Query: 74 ------IFKKADLIHAKVPILK---FQD---SSFKLEVDLN 102
+ + +L + K ILK +D S+F EV LN
Sbjct: 483 KTIDHWVNENVELFYKKFEILKSLLIEDIANSTFSKEVSLN 523
>UNIPROTKB|D2HS90 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9646 "Ailuropoda melanoleuca" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0016180 "snRNA processing"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS] [GO:0050265
"RNA uridylyltransferase activity" evidence=ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157
SMART:SM00355 SMART:SM00360 Pfam:PF03828 GO:GO:0005524
GO:GO:0005730 GO:GO:0046872 GO:GO:0016607 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730 GO:GO:0005847
GO:GO:0006379 GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GO:GO:0016180 EMBL:GL193267 ProteinModelPortal:D2HS90
HOGENOM:HOG000115998 Uniprot:D2HS90
Length = 869
Score = 159 (61.0 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 354 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 413
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 414 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEGEQVE 466
>UNIPROTKB|Q9H6E5 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
3'-UTR binding" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=IMP;IDA] [GO:0006379
"mRNA cleavage" evidence=IDA] [GO:0050265 "RNA uridylyltransferase
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016180 "snRNA processing" evidence=IMP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0071044 "histone
mRNA catabolic process" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 EMBL:CH471076 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180
HOGENOM:HOG000115998 CTD:64852 HOVERGEN:HBG079670 OrthoDB:EOG480HWB
EMBL:AK025920 EMBL:AK026000 EMBL:AK292610 EMBL:AP002990
EMBL:BC005013 EMBL:BC110910 EMBL:BC128263 IPI:IPI01012096
RefSeq:NP_073741.2 UniGene:Hs.728983 PDB:2E5G PDBsum:2E5G
ProteinModelPortal:Q9H6E5 SMR:Q9H6E5 IntAct:Q9H6E5 STRING:Q9H6E5
DMDM:126302611 PaxDb:Q9H6E5 PRIDE:Q9H6E5 Ensembl:ENST00000476907
GeneID:64852 KEGG:hsa:64852 GeneCards:GC11M062342 HGNC:HGNC:26184
MIM:610641 neXtProt:NX_Q9H6E5 PharmGKB:PA162407405
InParanoid:Q9H6E5 EvolutionaryTrace:Q9H6E5 GenomeRNAi:64852
NextBio:66977 ArrayExpress:Q9H6E5 Bgee:Q9H6E5 CleanEx:HS_TUT1
Genevestigator:Q9H6E5 GermOnline:ENSG00000149016 Uniprot:Q9H6E5
Length = 874
Score = 159 (61.0 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 355 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 414
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 415 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEGEQVE 467
>UNIPROTKB|F5H0R1 [details] [associations]
symbol:TUT1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355
SMART:SM00360 Pfam:PF03828 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
CTD:64852 EMBL:AP002990 RefSeq:NP_073741.2 UniGene:Hs.728983
GeneID:64852 KEGG:hsa:64852 HGNC:HGNC:26184 GenomeRNAi:64852
NextBio:66977 OMA:EQQGCAG IPI:IPI00946813 ProteinModelPortal:F5H0R1
SMR:F5H0R1 PhosphoSite:F5H0R1 PRIDE:F5H0R1 Ensembl:ENST00000308436
UCSC:uc001nto.2 ArrayExpress:F5H0R1 Bgee:F5H0R1 Uniprot:F5H0R1
Length = 912
Score = 159 (61.0 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 393 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLR 452
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 453 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-RDPPVLPT-VSQLTQKAGEGEQVE 505
>UNIPROTKB|E2R634 [details] [associations]
symbol:TUT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
GeneTree:ENSGT00550000074490 OMA:EQQGCAG EMBL:AAEX03011664
Ensembl:ENSCAFT00000025061 Uniprot:E2R634
Length = 873
Score = 158 (60.7 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 354 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDERVRPLVYTLR 413
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 414 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-REPPVLPT-VSQLTQKAGEGEQVE 466
>UNIPROTKB|F6X6U9 [details] [associations]
symbol:MIR3654 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
InterPro:IPR015880 PROSITE:PS50102 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 InterPro:IPR002058
Ensembl:ENSCAFT00000025061 ProteinModelPortal:F6X6U9 Uniprot:F6X6U9
Length = 818
Score = 158 (60.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 35/116 (30%), Positives = 66/116 (56%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L +++D R+RPLV ++
Sbjct: 356 VYRVQTVPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDERVRPLVYTLR 415
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ ++ + + +S+Y+ TL+VI+FLQ PPVLP V+Q K ++
Sbjct: 416 CWAQGRGLSGSGPL-LSNYALTLLVIYFLQT-REPPVLPT-VSQLTQKAGEGEQVE 468
Score = 36 (17.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 27 GSTMTGFGLDSSDVDMCLGIRPYEFDRGQ 55
GS++ F + D+D+ L + E + Q
Sbjct: 204 GSSINSFDVHGCDLDLFLDLGDLEESQPQ 232
>UNIPROTKB|A9JTS5 [details] [associations]
symbol:tut1 "Speckle targeted PIP5K1A-regulated poly(A)
polymerase" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0006378 "mRNA polyadenylation" evidence=ISS]
[GO:0006379 "mRNA cleavage" evidence=ISS] [GO:0016180 "snRNA
processing" evidence=ISS] [GO:0016607 "nuclear speck" evidence=ISS]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISS]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=ISS] InterPro:IPR000504 InterPro:IPR007087
InterPro:IPR012677 InterPro:IPR015880 Pfam:PF00076 PROSITE:PS00028
PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355 SMART:SM00360
Pfam:PF03828 GO:GO:0005524 GO:GO:0005730 GO:GO:0046872
GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0006378
GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260 GO:GO:0004652
InterPro:IPR002058 GO:GO:0050265 GO:GO:0016180 HOGENOM:HOG000115998
HOVERGEN:HBG079670 EMBL:BC155457 UniGene:Str.66101
ProteinModelPortal:A9JTS5 STRING:A9JTS5 Xenbase:XB-GENE-491663
Uniprot:A9JTS5
Length = 843
Score = 157 (60.3 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 55/215 (25%), Positives = 102/215 (47%)
Query: 22 RLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDR--GQAIRVLCVLETSDVDMCLEIFKKAD 79
+L GS++ GF + D+D+ L + E + G+A + + E S DM E+ +
Sbjct: 209 QLLPFGSSVNGFEISGCDLDLYLDLGDDEAENVEGKAEKEIQNREESSTDM--EVSMEDP 266
Query: 80 LIHAKVPILKFQDSSFKLEVDLNCN-NVVGVRNTHLLYCYAQKIFKKADLIH-------A 131
K ++ +S + D+ ++ G+ + +L + + +H A
Sbjct: 267 ETERKEEEMEIGNSKNDEDEDVTPGLSLKGLSSEEILEVVGKVLRHCVPGVHGVQSVPTA 326
Query: 132 KVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNI-- 189
+ P++ FQ + L D+ NN + +RN+ L + +D R+ LV V+ WA+ + +
Sbjct: 327 RRPVIHFQHKTSGLRGDVTLNNRLALRNSSFLRLCSDLDARVPQLVYTVRYWARVNQLAG 386
Query: 190 ND-AKNMTISSYSFTLMVIHFLQCGTSPPVLPNLV 223
N +++Y+ TL+V FLQ +PPVLP LV
Sbjct: 387 NPFGGGPLLNNYALTLLVFFFLQT-RNPPVLPTLV 420
>RGD|1561043 [details] [associations]
symbol:Tut1 "terminal uridylyl transferase 1, U6 snRNA-specific"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=ISO;ISS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISO;ISS] [GO:0004652 "polynucleotide adenylyltransferase
activity" evidence=ISO;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=ISO;ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISO;ISS] [GO:0006379 "mRNA cleavage" evidence=ISO;ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016180 "snRNA
processing" evidence=ISO;ISS] [GO:0016607 "nuclear speck"
evidence=ISO;ISS] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0050265 "RNA uridylyltransferase activity" evidence=ISO;ISS]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50102 PROSITE:PS50157 SMART:SM00355
SMART:SM00360 Pfam:PF03828 RGD:1561043 GO:GO:0005524 GO:GO:0005730
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0006378 GO:GO:0003730 GO:GO:0006379 eggNOG:COG5260
GO:GO:0004652 InterPro:IPR002058 GO:GO:0050265
GeneTree:ENSGT00550000074490 GO:GO:0016180 CTD:64852
HOVERGEN:HBG079670 OrthoDB:EOG480HWB OMA:EQQGCAG EMBL:BC104695
IPI:IPI00371444 RefSeq:NP_001029073.1 UniGene:Rn.129389
ProteinModelPortal:Q3MHT4 SMR:Q3MHT4 IntAct:Q3MHT4 STRING:Q3MHT4
PhosphoSite:Q3MHT4 PRIDE:Q3MHT4 Ensembl:ENSRNOT00000027187
GeneID:499314 KEGG:rno:499314 UCSC:RGD:1561043 InParanoid:Q3MHT4
NextBio:702524 Genevestigator:Q3MHT4 GermOnline:ENSRNOG00000020047
Uniprot:Q3MHT4
Length = 866
Score = 158 (60.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 122 IFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVK 181
+++ + A+ P++KF L D++ +N + + N+ L ++MD R+RPLV ++
Sbjct: 356 VYRVQTVPSARRPVVKFCHRPSGLHGDISLSNRLALYNSRFLNLCSEMDSRVRPLVYTLR 415
Query: 182 LWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQYPTKFSPNSNID 237
WAQ HN +++Y+ TL+VI+FLQ PPVLP VAQ + ++
Sbjct: 416 CWAQ-HNGLSGGGPLLNNYALTLLVIYFLQT-RDPPVLPT-VAQLTQRSGEGEQVE 468
Score = 36 (17.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 2 TLSKAVEEYVRFTLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYE 50
TL A+ + V FT P V + GS++ F + D+D+ L + E
Sbjct: 181 TLVVALMQEV-FTEFFPGCV-VHPFGSSVNSFDVHGCDLDLFLDLGDME 227
>DICTYBASE|DDB_G0271962 [details] [associations]
symbol:DDB_G0271962 species:44689 "Dictyostelium
discoideum" [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909
dictyBase:DDB_G0271962 Pfam:PF03828 EMBL:AAFI02000007
eggNOG:COG5260 InterPro:IPR002058 GO:GO:0016779 RefSeq:XP_645343.1
ProteinModelPortal:Q8T2J7 EnsemblProtists:DDB0168581 GeneID:8618231
KEGG:ddi:DDB_G0271962 InParanoid:Q8T2J7 OMA:SYSITNM Uniprot:Q8T2J7
Length = 466
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/109 (36%), Positives = 54/109 (49%)
Query: 110 RNTHLLYCY-------AQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHL 162
RN +CY A + +IHAKVPI+KF D + D+ G NT +
Sbjct: 220 RNDITKWCYQFSSILRANGFYNIKPIIHAKVPIVKFFDPKTEFHCDITLTKDSG--NTGV 277
Query: 163 LYCYAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQ 211
+ + Q+ + L++ K WA NINDA T+SSYS T MVI LQ
Sbjct: 278 VKEFCQLLPILPVLIIFCKNWASVLNINDASQGTLSSYSITNMVIFVLQ 326
>UNIPROTKB|E9PKX1 [details] [associations]
symbol:ZCCHC11 "Terminal uridylyltransferase 4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001878 InterPro:IPR002934 Pfam:PF01909
PROSITE:PS50158 SMART:SM00343 Pfam:PF03828 GO:GO:0005737
GO:GO:0005730 GO:GO:0008270 GO:GO:0003676 EMBL:AL513218
InterPro:IPR002058 GO:GO:0016779 EMBL:AL138849 HGNC:HGNC:28981
ChiTaRS:ZCCHC11 EMBL:AL591167 IPI:IPI00976712
ProteinModelPortal:E9PKX1 SMR:E9PKX1 Ensembl:ENST00000484723
ArrayExpress:E9PKX1 Bgee:E9PKX1 Uniprot:E9PKX1
Length = 906
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 106 VVGVRNTHLLYCYAQKIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYC 165
V+G+ ++LY + F HAKVP++ +D L ++ N + T LL
Sbjct: 191 VLGILKKNVLYVDVESDF------HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTA 244
Query: 166 YAQMDWRIRPLVLLVKLWAQAHNINDAKNMTISSYSFTLMVIHFLQCGTSPPVLPNLVAQ 225
+++ PLVL + WA+ I+ + I SY F LMV+ FLQ PP+LP L+
Sbjct: 245 LGKIEPVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQ-QRKPPLLPCLLGS 303
Query: 226 YPTKFSPNSNIDNIQ 240
+ F P +D+ Q
Sbjct: 304 WIEGFDPK-RMDDFQ 317
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQ 185
AKVPI+KF+ LE D++ N + NT +L YA +D R++ L +K++A+
Sbjct: 812 AKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAK 866
Score = 81 (33.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 33/111 (29%), Positives = 54/111 (48%)
Query: 7 VEEYVRF--TLRDPAHVRLFVVGSTMTGFGLDSSDVDMCLGIRPYEFDRGQAIRVLCVLE 64
VEE + T +RL+ GS++T F L SSDV++ + P I+VL +L+
Sbjct: 139 VEEMSKVITTFLPECSLRLY--GSSLTRFALKSSDVNIDIKFPPKMNHPDLLIKVLGILK 196
Query: 65 TSDVDMCLEIFKKADLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLL 115
+ L + ++D HAKVP++ +D L ++ N + T LL
Sbjct: 197 KN----VLYVDVESDF-HAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLL 242
>FB|FBgn0039251 [details] [associations]
symbol:Trf4-2 species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=ISS;NAS] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 EMBL:AE014297 GO:GO:0003887
eggNOG:COG5260 InterPro:IPR002058 KO:K03514 GO:GO:0007062
GeneTree:ENSGT00400000022055 OrthoDB:EOG4DV42F EMBL:AY119052
RefSeq:NP_651313.1 UniGene:Dm.10309 SMR:Q9VC07 MINT:MINT-774233
EnsemblMetazoa:FBtr0084718 GeneID:42983 KEGG:dme:Dmel_CG17462
UCSC:CG17462-RA CTD:42983 FlyBase:FBgn0039251 InParanoid:Q9VC07
OMA:SFRTGLN GenomeRNAi:42983 NextBio:831646 Uniprot:Q9VC07
Length = 407
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVV-GVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNI 189
A VP++KF D ++ D+ N+V GV+ L+ + + + LV+++K + H
Sbjct: 124 ASVPVVKFTDLISRIRFDVTFNSVASGVQAADLIKDFIRHFPELPKLVMVLKQFLSLHGF 183
Query: 190 NDAKNMT-ISSYSFTLMVIHFLQ 211
N+ N +SSY+ TLMVI FLQ
Sbjct: 184 NEVYNSGGVSSYALTLMVISFLQ 206
>UNIPROTKB|E2RJX8 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042493 "response to drug" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016779
"nucleotidyltransferase activity" evidence=IEA] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 GO:GO:0016779 GeneTree:ENSGT00400000022055
OMA:DNRIKIK EMBL:AAEX03017172 ProteinModelPortal:E2RJX8
Ensembl:ENSCAFT00000016392 Uniprot:E2RJX8
Length = 542
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 30/82 (36%), Positives = 47/82 (57%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR L+ Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAELIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>WB|WBGene00014115 [details] [associations]
symbol:gld-4 species:6239 "Caenorhabditis elegans"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0004652 "polynucleotide
adenylyltransferase activity" evidence=IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0040010 GO:GO:0048471 GO:GO:0046872 GO:GO:0006378
GO:GO:0040035 GO:GO:0007281 GO:GO:0043186 GO:GO:0004652
InterPro:IPR002058 KO:K03514 EMBL:Z79759 EMBL:FJ610054
RefSeq:NP_492446.3 UniGene:Cel.16131 ProteinModelPortal:G5EFL0
SMR:G5EFL0 EnsemblMetazoa:ZK858.1 GeneID:172735
KEGG:cel:CELE_ZK858.1 CTD:172735 WormBase:ZK858.1
GeneTree:ENSGT00400000022055 OMA:KISMFGS NextBio:876795
Uniprot:G5EFL0
Length = 845
Score = 118 (46.6 bits), Expect = 0.00039, P = 0.00039
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
A VPI+K D +L +D++ N V GVR + + I PLVLL+K + N+N
Sbjct: 179 AFVPIVKMVDRDTRLSIDISFNTVQGVRAASYIAKVKEEFPLIEPLVLLLKQFLHYRNLN 238
Query: 191 DAKNMTISSYSFTLMVIHFLQ 211
+SSY L++++F Q
Sbjct: 239 QTFTGGLSSYGLVLLLVNFFQ 259
>UNIPROTKB|E1BEH2 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:DAAA02051298 IPI:IPI00706336 UniGene:Bt.6221
Ensembl:ENSBTAT00000004384 Uniprot:E1BEH2
Length = 541
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR + Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>UNIPROTKB|F1S0S9 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042493 "response to drug" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR002934 Pfam:PF01909
Pfam:PF03828 GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058
GO:GO:0016779 GeneTree:ENSGT00400000022055 OMA:DNRIKIK
EMBL:CU856020 Ensembl:ENSSSCT00000018620 Uniprot:F1S0S9
Length = 541
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR + Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>RGD|1307356 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA;ISO] InterPro:IPR002934
Pfam:PF01909 Pfam:PF03828 RGD:1307356 GO:GO:0005634 GO:GO:0042493
InterPro:IPR002058 KO:K03514 GO:GO:0016779 EMBL:CH474002
GeneTree:ENSGT00400000022055 CTD:11044 OrthoDB:EOG4N04DQ
IPI:IPI00870911 RefSeq:NP_001100803.1 UniGene:Rn.22554
Ensembl:ENSRNOT00000023712 GeneID:306672 KEGG:rno:306672
UCSC:RGD:1307356 NextBio:656405 Uniprot:D3ZSY1
Length = 541
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR + Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>UNIPROTKB|Q5XG87 [details] [associations]
symbol:PAPD7 "DNA polymerase sigma" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=NAS] [GO:0007062 "sister
chromatid cohesion" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043221 "SMC family protein binding"
evidence=TAS] [GO:0042493 "response to drug" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828 GO:GO:0005634
GO:GO:0051301 GO:GO:0042493 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0006302 GO:GO:0007076 EMBL:CH471102
GO:GO:0003887 eggNOG:COG5260 InterPro:IPR002058 KO:K03514
GO:GO:0007062 HOGENOM:HOG000290646 EMBL:AF089896 EMBL:AB005754
EMBL:AY623114 EMBL:AK289857 EMBL:BC084567 EMBL:BC117137
EMBL:BC126106 IPI:IPI00418630 RefSeq:NP_001165276.1
RefSeq:NP_001165277.1 RefSeq:NP_008930.1 UniGene:Hs.481542
ProteinModelPortal:Q5XG87 SMR:Q5XG87 STRING:Q5XG87
PhosphoSite:Q5XG87 DMDM:60392922 PaxDb:Q5XG87 PRIDE:Q5XG87
DNASU:11044 Ensembl:ENST00000230859 GeneID:11044 KEGG:hsa:11044
UCSC:uc003jdx.1 CTD:11044 GeneCards:GC05P006714 HGNC:HGNC:16705
HPA:HPA045487 HPA:HPA046742 MIM:605198 neXtProt:NX_Q5XG87
PharmGKB:PA33523 HOVERGEN:HBG053636 InParanoid:Q5XG87 OMA:DNRIKIK
OrthoDB:EOG4N04DQ PhylomeDB:Q5XG87 ChiTaRS:PAPD7 GenomeRNAi:11044
NextBio:41972 ArrayExpress:Q5XG87 Bgee:Q5XG87 CleanEx:HS_POLS
Genevestigator:Q5XG87 GermOnline:ENSG00000112941 GO:GO:0043221
Uniprot:Q5XG87
Length = 542
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR + Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>MGI|MGI:2682295 [details] [associations]
symbol:Papd7 "PAP associated domain containing 7"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0042493 "response to drug" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 MGI:MGI:2682295 Pfam:PF03828
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0003887 eggNOG:COG5260
InterPro:IPR002058 KO:K03514 HOGENOM:HOG000290646 CTD:11044
HOVERGEN:HBG053636 OrthoDB:EOG4N04DQ ChiTaRS:PAPD7 EMBL:BC059846
IPI:IPI00387593 RefSeq:NP_941002.2 UniGene:Mm.315959
ProteinModelPortal:Q6PB75 SMR:Q6PB75 STRING:Q6PB75
PhosphoSite:Q6PB75 PRIDE:Q6PB75 GeneID:210106 KEGG:mmu:210106
UCSC:uc007rch.2 InParanoid:Q6PB75 NextBio:372866 CleanEx:MM_POLS
Genevestigator:Q6PB75 GermOnline:ENSMUSG00000034575 Uniprot:Q6PB75
Length = 542
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRP-LVLLVKLWAQAHNI 189
A VPI+K D +++VD++ N GVR + Y + + + P L+L++K + ++
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKK-YSLLPYLILVLKQFLLQRDL 143
Query: 190 NDAKNMTISSYSFTLMVIHFLQ 211
N+ ISSYS LM I FLQ
Sbjct: 144 NEVFTGGISSYSLILMAISFLQ 165
>DICTYBASE|DDB_G0295737 [details] [associations]
symbol:DDB_G0295737 "PAP/25A-associated
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
InterPro:IPR002934 Pfam:PF01909 dictyBase:DDB_G0295737 Pfam:PF03828
EMBL:AAFI02000149 InterPro:IPR002058 GO:GO:0016779
RefSeq:XP_002649102.1 EnsemblProtists:DDB0252871 GeneID:8627367
KEGG:ddi:DDB_G0295737 OMA:NIDICFD Uniprot:C7G070
Length = 938
Score = 116 (45.9 bits), Expect = 0.00075, P = 0.00075
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 127 DLIHAKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQA 186
++ AKVPI+K S +D+ + G+ NT ++ + +R L+L++K +
Sbjct: 545 NIFGAKVPIIKMTSSHSHYNIDICFDTPNGIENTAVVKGLLKQYKSMRTLLLIIKFFLHQ 604
Query: 187 HNINDAKNMTISSYSFTLMVIHFLQ 211
+N+N+ I SY+ LMV+ F+Q
Sbjct: 605 NNLNETYTGGIGSYALALMVVSFIQ 629
>UNIPROTKB|F1NJM3 [details] [associations]
symbol:PAPD7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] InterPro:IPR002934 Pfam:PF01909 Pfam:PF03828
GO:GO:0005634 GO:GO:0042493 InterPro:IPR002058 GO:GO:0016779
GeneTree:ENSGT00400000022055 EMBL:AADN02007996 EMBL:AADN02007997
EMBL:AADN02007998 EMBL:AADN02007999 EMBL:AADN02008000
EMBL:AADN02008001 EMBL:AADN02008002 IPI:IPI00571796
Ensembl:ENSGALT00000021321 ArrayExpress:F1NJM3 Uniprot:F1NJM3
Length = 370
Score = 110 (43.8 bits), Expect = 0.0010, P = 0.0010
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 131 AKVPILKFQDSSFKLEVDLNCNNVVGVRNTHLLYCYAQMDWRIRPLVLLVKLWAQAHNIN 190
A VPI+K D +++VD++ N GV+ + Y + + L+L++K + ++N
Sbjct: 85 ATVPIIKLTDQETEVKVDISFNVETGVKAARFIKEYMKKYTLLPYLILVLKQFLLQRDLN 144
Query: 191 DAKNMTISSYSFTLMVIHFLQ 211
+ ISSYS LM I FLQ
Sbjct: 145 EVFTGGISSYSLILMAISFLQ 165
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 243 243 0.00097 113 3 11 22 0.36 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 609 (65 KB)
Total size of DFA: 188 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.86u 0.16s 19.02t Elapsed: 00:00:01
Total cpu time: 18.87u 0.16s 19.03t Elapsed: 00:00:01
Start: Thu Aug 15 12:03:05 2013 End: Thu Aug 15 12:03:06 2013