BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13000
(65 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91085925|ref|XP_969990.1| PREDICTED: similar to GA20793-PA [Tribolium castaneum]
gi|270009953|gb|EFA06401.1| hypothetical protein TcasGA2_TC009279 [Tribolium castaneum]
Length = 214
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FGK EEK PTTGEAIQKLRETEDMLIKKQE+LE KI +EI A+ N +KNKR
Sbjct: 1 MSFFGKMFGKKEEKAPTTGEAIQKLRETEDMLIKKQEYLESKIDQEILTAKKNASKNKR 59
>gi|289739563|gb|ADD18529.1| hypothatical protein [Glossina morsitans morsitans]
Length = 234
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 50/59 (84%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E+ P+TGEAIQKLRETE+MLIKKQEFLE KI EE+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEQAPSTGEAIQKLRETENMLIKKQEFLESKIEEELNIARKNASKNKR 59
>gi|242004538|ref|XP_002423140.1| Charged multivesicular body protein 4C, putative [Pediculus
humanus corporis]
gi|212506086|gb|EEB10402.1| Charged multivesicular body protein 4C, putative [Pediculus
humanus corporis]
Length = 211
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K +K PTTGEAIQKLRETEDMLIKKQEFLE KI +E+ IAR NG KNKR
Sbjct: 1 MSFFGRMFGGKKGDKAPTTGEAIQKLRETEDMLIKKQEFLESKIEQELQIARANGVKNKR 60
>gi|194863252|ref|XP_001970351.1| GG10579 [Drosophila erecta]
gi|190662218|gb|EDV59410.1| GG10579 [Drosophila erecta]
Length = 226
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>gi|195401617|ref|XP_002059409.1| GJ18577 [Drosophila virilis]
gi|194142415|gb|EDW58821.1| GJ18577 [Drosophila virilis]
Length = 228
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI EE+N AR N +KNKR
Sbjct: 1 MSFFGKMFGAKKEVAPTTGEAIQKLRETENMLIKKQEFLESKIEEELNTARKNASKNKR 59
>gi|194754635|ref|XP_001959600.1| GF12950 [Drosophila ananassae]
gi|190620898|gb|EDV36422.1| GF12950 [Drosophila ananassae]
Length = 226
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>gi|195474956|ref|XP_002089752.1| GE22521 [Drosophila yakuba]
gi|194175853|gb|EDW89464.1| GE22521 [Drosophila yakuba]
Length = 226
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>gi|28573949|ref|NP_610462.3| shrub [Drosophila melanogaster]
gi|17861598|gb|AAL39276.1| GH13992p [Drosophila melanogaster]
gi|28381065|gb|AAF58977.2| shrub [Drosophila melanogaster]
gi|220945254|gb|ACL85170.1| shrb-PA [synthetic construct]
gi|220954992|gb|ACL90039.1| shrb-PA [synthetic construct]
Length = 226
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>gi|195332727|ref|XP_002033045.1| GM20627 [Drosophila sechellia]
gi|195581800|ref|XP_002080718.1| GD10100 [Drosophila simulans]
gi|194125015|gb|EDW47058.1| GM20627 [Drosophila sechellia]
gi|194192727|gb|EDX06303.1| GD10100 [Drosophila simulans]
Length = 226
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>gi|121543879|gb|ABM55604.1| putative chromatin modifying protein 4B [Maconellicoccus
hirsutus]
Length = 223
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSF +FG K EEKGPTT EAIQ LR+TE+ML+KKQ FLEKKI EE+ +A+ NGTKNKR
Sbjct: 1 MSFLSKVFGGKKEEKGPTTAEAIQNLRQTEEMLMKKQSFLEKKIDEELAVAKANGTKNKR 60
>gi|195119458|ref|XP_002004248.1| GI19821 [Drosophila mojavensis]
gi|193909316|gb|EDW08183.1| GI19821 [Drosophila mojavensis]
Length = 227
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI EE+N AR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLESKIEEELNTARKNASKNKR 59
>gi|195029481|ref|XP_001987601.1| GH19872 [Drosophila grimshawi]
gi|193903601|gb|EDW02468.1| GH19872 [Drosophila grimshawi]
Length = 228
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI EE+N AR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLESKIEEELNTARKNASKNKR 59
>gi|195154148|ref|XP_002017984.1| GL17464 [Drosophila persimilis]
gi|198460135|ref|XP_001361621.2| GA20793 [Drosophila pseudoobscura pseudoobscura]
gi|194113780|gb|EDW35823.1| GL17464 [Drosophila persimilis]
gi|198136915|gb|EAL26200.2| GA20793 [Drosophila pseudoobscura pseudoobscura]
Length = 231
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E++IAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELSIARKNASKNKR 59
>gi|195456017|ref|XP_002074966.1| GK22870 [Drosophila willistoni]
gi|194171051|gb|EDW85952.1| GK22870 [Drosophila willistoni]
Length = 227
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E P+TGEAIQKLRETE+MLIKKQEFLE KI EE+N AR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPSTGEAIQKLRETENMLIKKQEFLESKIEEELNTARKNASKNKR 59
>gi|321458061|gb|EFX69136.1| hypothetical protein DAPPUDRAFT_62579 [Daphnia pulex]
Length = 221
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 53/61 (86%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKT-EEKG-PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSF + +FG ++KG PTTG+AIQKLRETE+MLIKKQEFLEKKI +E++IA+ NGTKNK
Sbjct: 1 MSFLQKMFGAGGKDKGMPTTGQAIQKLRETEEMLIKKQEFLEKKIDQELDIAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|383865789|ref|XP_003708355.1| PREDICTED: charged multivesicular body protein 4b-like [Megachile
rotundata]
Length = 221
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGP-TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG ++ P TT EAIQKLRETEDMLIKKQ+FLE KI EI +AR NGTKNKR
Sbjct: 1 MSFFTKVFGGKKDPAPMTTAEAIQKLRETEDMLIKKQDFLESKIELEIQVARKNGTKNKR 60
>gi|307195894|gb|EFN77673.1| Charged multivesicular body protein 4b [Harpegnathos saltator]
Length = 223
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E P+T EAIQKLRETEDMLIKKQEFLE KI E+ IA+ N +KNKR
Sbjct: 1 MSFFSKVFGGKKEPAAPSTAEAIQKLRETEDMLIKKQEFLESKIDNEVLIAKKNASKNKR 60
>gi|357612367|gb|EHJ67943.1| hypothetical protein KGM_19860 [Danaus plexippus]
Length = 219
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSF +FG K EEKGPTT EAIQKLRETE++LIKKQEFLEKKI EI A+ NGTKNKR
Sbjct: 1 MSFLGKLFGGKKEEKGPTTHEAIQKLRETEELLIKKQEFLEKKIELEIQTAKKNGTKNKR 60
>gi|332028439|gb|EGI68482.1| Charged multivesicular body protein 4b [Acromyrmex echinatior]
Length = 221
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E P+T EAIQKLRETEDMLIKKQEFLE KI EI IA+ N +KNKR
Sbjct: 1 MSFFSKVFGGKKEPTAPSTAEAIQKLRETEDMLIKKQEFLESKIDNEILIAKKNASKNKR 60
>gi|239789042|dbj|BAH71170.1| ACYPI007250 [Acyrthosiphon pisum]
Length = 155
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSF IFG K EEKGP+T +AIQKLR TE+MLIKKQEFLEKKI +E+ IA+ NGT NKR
Sbjct: 1 MSFLGKIFGSKKEEKGPSTEDAIQKLRSTEEMLIKKQEFLEKKIEQEVAIAKKNGTTNKR 60
>gi|307184997|gb|EFN71226.1| Charged multivesicular body protein 4b [Camponotus floridanus]
Length = 221
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E P+T EAIQKLRETEDMLIKKQEFLE KI E+ IA+ N +KNKR
Sbjct: 1 MSFFSKVFGGKKEAAAPSTAEAIQKLRETEDMLIKKQEFLETKIDNEVLIAKKNASKNKR 60
>gi|193603720|ref|XP_001951538.1| PREDICTED: charged multivesicular body protein 4b-like
[Acyrthosiphon pisum]
Length = 223
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSF IFG K EEKGP+T +AIQKLR TE+MLIKKQEFLEKKI +E+ IA+ NGT NKR
Sbjct: 1 MSFLGKIFGSKKEEKGPSTEDAIQKLRSTEEMLIKKQEFLEKKIEQEVAIAKKNGTTNKR 60
>gi|322795245|gb|EFZ18056.1| hypothetical protein SINV_05664 [Solenopsis invicta]
Length = 75
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E P+T EAIQKLRETEDML+KKQEFLE KI E++IAR N +KNKR
Sbjct: 1 MSFFSKVFGGKKEPAAPSTAEAIQKLRETEDMLLKKQEFLETKIENEMSIARKNASKNKR 60
>gi|395859353|ref|XP_003802004.1| PREDICTED: transmembrane 9 superfamily member 1 [Otolemur
garnettii]
Length = 816
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ +A+ +GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKHGTKNKR 60
>gi|340724738|ref|XP_003400738.1| PREDICTED: charged multivesicular body protein 4b-like [Bombus
terrestris]
gi|350398503|ref|XP_003485212.1| PREDICTED: charged multivesicular body protein 4b-like [Bombus
impatiens]
Length = 221
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E +T EAIQKLRETEDMLIKKQ+FLE KI EI A+ NGTKNKR
Sbjct: 1 MSFFSKVFGGKKEPVSMSTAEAIQKLRETEDMLIKKQDFLESKIELEIQTAKKNGTKNKR 60
>gi|345491767|ref|XP_001607501.2| PREDICTED: charged multivesicular body protein 4b-like [Nasonia
vitripennis]
Length = 220
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG K E PTT EAIQKLR TED+L+KKQ +LE KI E+ AR NGTKN+R
Sbjct: 1 MSFFTKVFGGKKETAAPTTAEAIQKLRVTEDLLVKKQAYLEDKIENELMTARKNGTKNRR 60
>gi|380020995|ref|XP_003694360.1| PREDICTED: charged multivesicular body protein 4b-like [Apis
florea]
Length = 221
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGP-TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E P +T +AIQKLRETEDMLIKKQ+FLE KI EI A+ +GTKNKR
Sbjct: 1 MSFFSKVFGGKKEPAPLSTADAIQKLRETEDMLIKKQDFLENKIEIEIQTAKKHGTKNKR 60
>gi|66551959|ref|XP_395324.2| PREDICTED: charged multivesicular body protein 4b [Apis
mellifera]
Length = 221
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGP-TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E P +T +AIQKLRETEDMLIKKQ+FLE KI EI A+ +GTKNKR
Sbjct: 1 MSFFSKVFGGKKEAAPLSTADAIQKLRETEDMLIKKQDFLENKIEIEIQTAKKHGTKNKR 60
>gi|397475383|ref|XP_003809118.1| PREDICTED: transmembrane 9 superfamily member 1 [Pan paniscus]
Length = 858
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 44 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 103
>gi|390468881|ref|XP_002753710.2| PREDICTED: transmembrane 9 superfamily member 1 isoform 1
[Callithrix jacchus]
Length = 814
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|221043076|dbj|BAH13215.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|158293972|ref|XP_315330.3| AGAP005316-PA [Anopheles gambiae str. PEST]
gi|157015348|gb|EAA11799.3| AGAP005316-PA [Anopheles gambiae str. PEST]
Length = 225
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIF-GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +F GK E PT EAIQKLR+ E+ML KKQEFLEKKI EI+ AR NGTKNKR
Sbjct: 1 MSFFGKLFSGKKGEPAPTPSEAIQKLRDIENMLTKKQEFLEKKIEVEIDTARKNGTKNKR 60
>gi|170059579|ref|XP_001865424.1| charged multivesicular body protein 4c [Culex quinquefasciatus]
gi|167878290|gb|EDS41673.1| charged multivesicular body protein 4c [Culex quinquefasciatus]
Length = 225
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIF-GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF IF GK E PT EAIQKLR+ E+ML KKQEFLEKKI E++ AR NGTKNKR
Sbjct: 1 MSFFGKIFSGKKGEPAPTPSEAIQKLRDIENMLTKKQEFLEKKIEVELDTARKNGTKNKR 60
>gi|157122921|ref|XP_001659957.1| charged multivesicular body protein 4b [Aedes aegypti]
gi|108882957|gb|EAT47182.1| AAEL001698-PA [Aedes aegypti]
Length = 223
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIF-GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +F GK E PT EAIQKLR+ E+ML KKQEFLEKKI E++ AR NGTKNKR
Sbjct: 1 MSFFGKLFSGKKGEPAPTPSEAIQKLRDIENMLTKKQEFLEKKIEVELDTARKNGTKNKR 60
>gi|332375769|gb|AEE63025.1| unknown [Dendroctonus ponderosae]
Length = 220
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 46/59 (77%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E+ P+T +AIQKLRET+D+L KKQE+LEK+I + I AR N +KNKR
Sbjct: 1 MSFFGKLFGGKKEEAPSTSDAIQKLRETQDLLAKKQEYLEKQIDDCILTARKNASKNKR 59
>gi|312381096|gb|EFR26917.1| hypothetical protein AND_06671 [Anopheles darlingi]
Length = 351
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIF-GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +F GK E PT EAIQKLR+ E+ML KK+EFLEKKI EI+ AR NGTKNKR
Sbjct: 1 MSFFGKLFSGKKGEPAPTPSEAIQKLRDIENMLTKKEEFLEKKIEMEIDTARKNGTKNKR 60
>gi|269146708|gb|ACZ28300.1| glucose derepression and pre-vacuolar endosome sorting protein
[Simulium nigrimanum]
Length = 223
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIF-GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +F GK E PT EAIQKLR+ E+ML KKQ+FLEKKI E++ AR NGTKNKR
Sbjct: 1 MSFFGKLFSGKKGEPQPTPSEAIQKLRDIENMLTKKQDFLEKKIELELDSARKNGTKNKR 60
>gi|47220460|emb|CAG03240.1| unnamed protein product [Tetraodon nigroviridis]
Length = 212
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTE-EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS IFG + K P+ EAIQKLRETE+ML KKQEFLEKKI +E+ A+ NGTKNKR
Sbjct: 1 MSLLSKIFGGGKGAKAPSPQEAIQKLRETEEMLTKKQEFLEKKIEQELQTAKKNGTKNKR 60
>gi|443682876|gb|ELT87311.1| hypothetical protein CAPTEDRAFT_168545 [Capitella teleta]
Length = 219
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG K EK PT+ EAIQ+LRETEDML KK ++LEKKI EI AR +GTKNK
Sbjct: 1 MSVLGRLFGSGKKGEKAPTSQEAIQRLRETEDMLSKKSDYLEKKIESEIATARKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|126278192|ref|XP_001380207.1| PREDICTED: charged multivesicular body protein 4a-like
[Monodelphis domestica]
Length = 225
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKT-EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EK P+ EAIQKLRETE +LIKKQEFLE+KI +E+ IA+ +GTKNKR
Sbjct: 1 MSSLGRLFGRAGKEKNPSPEEAIQKLRETEKILIKKQEFLEQKIQQELQIAKKHGTKNKR 60
>gi|410961986|ref|XP_003987559.1| PREDICTED: charged multivesicular body protein 4a [Felis catus]
Length = 220
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ +A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKHGTKNKR 60
>gi|402585470|gb|EJW79410.1| charged multivesicular body protein 4c [Wuchereria bancrofti]
Length = 228
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 1 MSFFKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKN 57
MS F IFG K + T E+IQKLRETE+ML+KKQEFLEKKI EI AR +GTKN
Sbjct: 1 MSVFGKIFGSGRKQQAPSATPQESIQKLRETEEMLVKKQEFLEKKIEAEIASARKHGTKN 60
Query: 58 KREFDH 63
KR H
Sbjct: 61 KRLALH 66
>gi|324511136|gb|ADY44645.1| Charged multivesicular body protein 4b [Ascaris suum]
Length = 226
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 1 MSFFKNIFGKTEEKGP--TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS F IFG +++ P T E+IQKLRETE+ML+KKQEFLEKKI E+ AR +GTKNK
Sbjct: 1 MSVFGKIFGGGKKQPPAATPQESIQKLRETEEMLVKKQEFLEKKIEAEVASARKHGTKNK 60
Query: 59 REFDH 63
R H
Sbjct: 61 RLALH 65
>gi|427787281|gb|JAA59092.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 225
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSFF +FG K EK P+ GEAIQ+LRE E+ML KKQ+FLE K+ E+ A+ +GTKNK
Sbjct: 1 MSFFAKLFGGGKAGEKAPSPGEAIQRLREIEEMLNKKQDFLESKVKLELEAAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|170590376|ref|XP_001899948.1| Protein c20orf178 homolog [Brugia malayi]
gi|158592580|gb|EDP31178.1| Protein c20orf178 homolog, putative [Brugia malayi]
Length = 233
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 1 MSFFKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKN 57
MS F IFG K + T E+IQKLRETE+ML+KKQEFLEKKI EI AR +GTKN
Sbjct: 1 MSVFGKIFGSGRKQQAPSATPQESIQKLRETEEMLVKKQEFLEKKIEAEIASARKHGTKN 60
Query: 58 KREFDH 63
KR H
Sbjct: 61 KRLALH 66
>gi|348521814|ref|XP_003448421.1| PREDICTED: charged multivesicular body protein 4b-like
[Oreochromis niloticus]
Length = 220
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEE--KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS F IFG + K PT EAIQ+LRETE+ML KKQ+FLEKKI +E+ A+ NGTKNK
Sbjct: 1 MSLFGKIFGSGGKGGKAPTPQEAIQRLRETEEMLAKKQDFLEKKIEQELVTAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|335292565|ref|XP_003128593.2| PREDICTED: charged multivesicular body protein 4a-like [Sus
scrofa]
Length = 222
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 60
>gi|45386075|gb|AAS59855.1| KOG1656-like protein [Ornithodoros moubata]
Length = 223
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG K EK P GEAIQ+LRE E+ML KKQEFLEKK+ E++ A+ GTKNK
Sbjct: 1 MSLLSRLFGGGKNVEKAPAPGEAIQRLREIEEMLNKKQEFLEKKVNVELDAAKKYGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|190360723|ref|NP_001121976.1| charged multivesicular body protein 4a [Bos taurus]
gi|182627638|sp|A2VDY3.1|CHM4A_BOVIN RecName: Full=Charged multivesicular body protein 4a; AltName:
Full=Chromatin-modifying protein 4a; Short=CHMP4a
gi|125658148|gb|AAI33472.2| CHMP4A protein [Bos taurus]
gi|296483667|tpg|DAA25782.1| TPA: charged multivesicular body protein 4a [Bos taurus]
Length = 222
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIEQELQAAKKHGTKNKR 60
>gi|291403629|ref|XP_002718145.1| PREDICTED: charged multivesicular body protein 4C-like
[Oryctolagus cuniculus]
Length = 220
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 60
>gi|312065862|ref|XP_003135995.1| charged multivesicular body protein 4b [Loa loa]
gi|307768838|gb|EFO28072.1| charged multivesicular body protein 4b [Loa loa]
Length = 227
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 1 MSFFKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKN 57
MS F IFG K + T E+IQKLRETE+ML+KKQEFLEKKI E+ AR +GTKN
Sbjct: 1 MSVFGKIFGGSRKQQTPSATPQESIQKLRETEEMLVKKQEFLEKKIEAEVASARKHGTKN 60
Query: 58 KREFDH 63
KR H
Sbjct: 61 KRLALH 66
>gi|114652379|ref|XP_001169363.1| PREDICTED: charged multivesicular body protein 4a isoform 6 [Pan
troglodytes]
gi|410212710|gb|JAA03574.1| chromatin modifying protein 4A [Pan troglodytes]
Length = 265
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 44 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 103
>gi|395745748|ref|XP_003780646.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body
protein 4a [Pongo abelii]
Length = 203
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 27 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 86
>gi|37362116|gb|AAQ91193.1| SNF7-1 [Homo sapiens]
gi|119586471|gb|EAW66067.1| chromatin modifying protein 4A, isoform CRA_c [Homo sapiens]
Length = 222
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|402875804|ref|XP_003901684.1| PREDICTED: charged multivesicular body protein 4a [Papio anubis]
Length = 222
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|403264112|ref|XP_003924336.1| PREDICTED: charged multivesicular body protein 4a [Saimiri
boliviensis boliviensis]
Length = 222
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|40548422|ref|NP_054888.2| charged multivesicular body protein 4a [Homo sapiens]
gi|28071136|emb|CAD61949.1| unnamed protein product [Homo sapiens]
gi|109730517|gb|AAI13534.1| Chromatin modifying protein 4A [Homo sapiens]
gi|109730519|gb|AAI13536.1| Chromatin modifying protein 4A [Homo sapiens]
gi|313882812|gb|ADR82892.1| chromatin modifying protein 4A [synthetic construct]
Length = 265
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 44 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 103
>gi|90152096|sp|Q9BY43.3|CHM4A_HUMAN RecName: Full=Charged multivesicular body protein 4a; AltName:
Full=Chromatin-modifying protein 4a; Short=CHMP4a;
AltName: Full=SNF7 homolog associated with Alix-2;
AltName: Full=SNF7-1; Short=hSnf-1; AltName:
Full=Vacuolar protein sorting-associated protein 32-1;
Short=Vps32-1; Short=hVps32-1
gi|13182765|gb|AAK14928.1|AF212243_1 CDA04 [Homo sapiens]
gi|62897467|dbj|BAC79376.2| Snf7 homologue associated with Alix 2 [Homo sapiens]
Length = 222
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|194207195|ref|XP_001918398.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
4a-like [Equus caballus]
Length = 264
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE KI +E+ A+ +GTKNKR
Sbjct: 44 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEHKIQQELQTAKKHGTKNKR 103
>gi|410925849|ref|XP_003976392.1| PREDICTED: charged multivesicular body protein 4b-like [Takifugu
rubripes]
Length = 221
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTE-EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS IFG + K P+ EAIQKLRETEDML KKQE LE KI +E+ A+ NGTKNKR
Sbjct: 1 MSLLSKIFGGGKGAKAPSPQEAIQKLRETEDMLTKKQEMLENKIEQELQTAKKNGTKNKR 60
>gi|78394925|gb|AAI07700.1| CHMP4A protein [Homo sapiens]
Length = 239
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 18 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 77
>gi|297297565|ref|XP_002808503.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
4a-like [Macaca mulatta]
Length = 266
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 45 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 104
>gi|346468813|gb|AEO34251.1| hypothetical protein [Amblyomma maculatum]
Length = 225
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSFF +FG K EK P+ GEAIQ+LRE E+ML KKQ+FLE K+ E+ A+ +GTKNK
Sbjct: 1 MSFFAKMFGGGKGGEKAPSPGEAIQRLREIEEMLNKKQDFLESKVRMELEAAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|119586470|gb|EAW66066.1| chromatin modifying protein 4A, isoform CRA_b [Homo sapiens]
Length = 214
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|260834627|ref|XP_002612311.1| hypothetical protein BRAFLDRAFT_221857 [Branchiostoma floridae]
gi|229297688|gb|EEN68320.1| hypothetical protein BRAFLDRAFT_221857 [Branchiostoma floridae]
Length = 211
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKG-PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG +++ PT GEAIQKLRETE+ML KK EFLE K+ +E+ IA+ NGTKNKR
Sbjct: 1 MSLIAKMFGGGKKQAQPTPGEAIQKLRETEEMLEKKSEFLESKVQKELAIAKKNGTKNKR 60
>gi|48257063|gb|AAH10893.2| CHMP4A protein, partial [Homo sapiens]
Length = 231
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 10 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 69
>gi|297288446|ref|XP_002803348.1| PREDICTED: charged multivesicular body protein 4a-like [Macaca
mulatta]
Length = 234
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 13 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKVLIKKQEFLEQKIQQELQTAKKYGTKNKR 72
>gi|47214848|emb|CAF95754.1| unnamed protein product [Tetraodon nigroviridis]
Length = 201
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEEKG--PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG + G PT EAIQ+LRETE+ML KKQEFLEKKI +E+ A+ NGTKNK
Sbjct: 1 MSVLMKLFGSGGKSGKQPTPQEAIQRLRETEEMLTKKQEFLEKKIDQELLTAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|325302782|tpg|DAA34043.1| TPA_exp: glucose derepression and pre-vacuolar endosome protein
sorting protein [Amblyomma variegatum]
Length = 176
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSFF +FG K EK P+ GEAIQ+LRE E+ML KKQ+FLE K+ E+ A+ +GTKNK
Sbjct: 1 MSFFAKMFGGGKGGEKAPSPGEAIQRLREIEEMLNKKQDFLESKVKMELEAAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|442750011|gb|JAA67165.1| Hypothetical protein [Ixodes ricinus]
Length = 225
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSFF +FG K EK P+ GEAIQ+LRE E+ML KKQ+FLE K+ E++ A+ +GTKNK
Sbjct: 1 MSFFSRMFGGGKGGEKAPSPGEAIQRLREIEEMLNKKQDFLESKVKLELDQAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|345804205|ref|XP_537387.2| PREDICTED: charged multivesicular body protein 4a [Canis lupus
familiaris]
Length = 222
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ +A+ +G KNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKHGIKNKR 60
>gi|241640978|ref|XP_002410943.1| glucose de-repression and pre-vacuolar sorting protein, putative
[Ixodes scapularis]
gi|215503641|gb|EEC13135.1| glucose de-repression and pre-vacuolar sorting protein, putative
[Ixodes scapularis]
Length = 159
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSFF +FG K EK P+ GEAIQ+LRE E+ML KKQ+FLE K+ E++ A+ +GTKNK
Sbjct: 1 MSFFSRMFGGGKGGEKAPSPGEAIQRLREIEEMLNKKQDFLESKVKLELDQAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|344298664|ref|XP_003421011.1| PREDICTED: charged multivesicular body protein 4a-like [Loxodonta
africana]
Length = 222
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EK PT EAIQKL+ETE +LIKKQEFLE KI +E+ +A+ +GTKNKR
Sbjct: 1 MSGLSRLFGKGKKEKEPTPEEAIQKLKETEKILIKKQEFLEHKIQQELQMAKKHGTKNKR 60
>gi|332223146|ref|XP_003260729.1| PREDICTED: charged multivesicular body protein 4a [Nomascus
leucogenys]
Length = 222
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT +AIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEKAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|301771356|ref|XP_002921116.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
4a-like [Ailuropoda melanoleuca]
Length = 264
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +G KNKR
Sbjct: 43 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGIKNKR 102
>gi|432864642|ref|XP_004070388.1| PREDICTED: charged multivesicular body protein 4b-like [Oryzias
latipes]
Length = 222
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P+ EAIQKLRETE+ML KKQEFLEKKI +E+ IA+ NGTKNKR
Sbjct: 18 PSPQEAIQKLRETEEMLTKKQEFLEKKIDQELQIAKKNGTKNKR 61
>gi|380794351|gb|AFE69051.1| charged multivesicular body protein 4a, partial [Macaca mulatta]
Length = 246
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGP EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 25 MSGLGRLFGKGKKEKGPIPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 84
>gi|343459039|gb|AEM37678.1| charged multivesicular body protein 4c [Epinephelus bruneus]
Length = 222
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 38/44 (86%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P+ EAIQKLRETE+ML KKQEFLEKKI +E+ IA+ NGTKNKR
Sbjct: 18 PSPQEAIQKLRETEEMLTKKQEFLEKKIEQELQIAKKNGTKNKR 61
>gi|6841490|gb|AAF29098.1|AF161483_1 HSPC134 [Homo sapiens]
Length = 223
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EK PT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKRPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>gi|148223287|ref|NP_001088290.1| charged multivesicular body protein 4b [Xenopus laevis]
gi|73917752|sp|Q5XGW6.1|CHM4B_XENLA RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b
gi|54038678|gb|AAH84312.1| LOC495125 protein [Xenopus laevis]
Length = 222
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEE--KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG + KGP+ EAIQKLR+TE+ML KKQEFLEKKI +E+ A+ +GTKNK
Sbjct: 1 MSLIGKLFGTGGKGAKGPSPQEAIQKLRDTEEMLAKKQEFLEKKIEQELVTAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|395503142|ref|XP_003755931.1| PREDICTED: charged multivesicular body protein 4a [Sarcophilus
harrisii]
Length = 222
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKT--EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG+ +E P+ EAIQKLRETE +LIKKQEFLE+KI +E+ A+ +GTKNK
Sbjct: 1 MSGLGRLFGRAGKKEDDPSPEEAIQKLRETEKILIKKQEFLEQKIQQELQTAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|156401531|ref|XP_001639344.1| predicted protein [Nematostella vectensis]
gi|156226472|gb|EDO47281.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 6 NIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
++FGK +E PTT EAIQKLR TE++L KK +FLEKKI E+ IA+ N +KNKR
Sbjct: 3 SMFGKKKETPPTTQEAIQKLRSTEELLQKKSDFLEKKIENELQIAKQNASKNKR 56
>gi|432106939|gb|ELK32460.1| Charged multivesicular body protein 4a [Myotis davidii]
Length = 346
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 13 EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 138 EKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 184
>gi|52345638|ref|NP_001004866.1| charged multivesicular body protein 4b [Xenopus (Silurana)
tropicalis]
gi|73917753|sp|Q6GL11.1|CHM4B_XENTR RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b
gi|49250444|gb|AAH74708.1| chromatin modifying protein 4B [Xenopus (Silurana) tropicalis]
gi|89269849|emb|CAJ83591.1| similar to chromatin modifying proteins (chmp) [Xenopus
(Silurana) tropicalis]
Length = 222
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEE--KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG + KGP+ EAIQKLR+TE+ML KKQEFLEKKI +E+ A+ +GTKNK
Sbjct: 1 MSLIGKLFGTGGKGAKGPSPQEAIQKLRDTEEMLTKKQEFLEKKIEQELVTAKKHGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|426233901|ref|XP_004010945.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body
protein 4a [Ovis aries]
Length = 259
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 13 EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 51 EKGPTPEEAIQKLKETEKILIKKQEFLEQKIEQELQTAKKHGTKNKR 97
>gi|73917754|sp|Q6IQ73.1|CHM4C_DANRE RecName: Full=Charged multivesicular body protein 4c; AltName:
Full=Chromatin-modifying protein 4c; Short=CHMP4c
gi|47940429|gb|AAH71537.1| Chromatin modifying protein 4B [Danio rerio]
Length = 224
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT EAIQKLRETE+ML KKQ+FLEKKI E+ IA+ NGTKNKR
Sbjct: 18 PTPQEAIQKLRETEEMLAKKQDFLEKKIDAELLIAKKNGTKNKR 61
>gi|339253506|ref|XP_003371976.1| charged multivesicular body protein 4c [Trichinella spiralis]
gi|316967679|gb|EFV52079.1| charged multivesicular body protein 4c [Trichinella spiralis]
Length = 310
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 1 MSFFKNIFGKTEEK---GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKN 57
M++F +FG +K PT EAIQ+LRETE+ML+KKQE+LEKKI E+ A+ GTKN
Sbjct: 1 MAWFSRVFGGNSKKRDVAPTPQEAIQRLRETEEMLVKKQEYLEKKIESELATAKRYGTKN 60
Query: 58 KR 59
KR
Sbjct: 61 KR 62
>gi|444728839|gb|ELW69281.1| Charged multivesicular body protein 4a [Tupaia chinensis]
Length = 222
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS FG+ +EK PT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRFFGRGKKEKEPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 60
>gi|351715855|gb|EHB18774.1| Charged multivesicular body protein 4a, partial [Heterocephalus
glaber]
Length = 193
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 13 EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+KGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 4 DKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 50
>gi|318037571|ref|NP_001188197.1| charged multivesicular body protein 4c [Ictalurus punctatus]
gi|308324027|gb|ADO29149.1| charged multivesicular body protein 4c [Ictalurus punctatus]
Length = 236
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI KLRETE+ML KKQE+LEKKI +EI IA+ NGT+NKR
Sbjct: 34 GPSPQEAIHKLRETEEMLNKKQEYLEKKIEQEIMIAKKNGTRNKR 78
>gi|348503448|ref|XP_003439276.1| PREDICTED: charged multivesicular body protein 4c-like
[Oreochromis niloticus]
Length = 218
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIF-GKTEEK---GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS N+F G ++ K GP+ EAI KLRETE+ML KKQ++LEK+I +E+ IA+ +GTK
Sbjct: 1 MSKISNLFKGGSKHKSKGGPSAQEAIHKLRETEEMLTKKQDYLEKRIEQELAIAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|350594828|ref|XP_003134450.3| PREDICTED: charged multivesicular body protein 4b-like [Sus
scrofa]
Length = 224
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TEDML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGEGGPTPQEAIQRLRDTEDMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|47087447|ref|NP_998622.1| charged multivesicular body protein 4c [Danio rerio]
gi|28278647|gb|AAH44191.1| Chromatin modifying protein 4B [Danio rerio]
gi|182891714|gb|AAI65053.1| Chmp4b protein [Danio rerio]
Length = 224
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 37/44 (84%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT EAIQKLRETE+ML +KQ+FLEKKI E+ IA+ NGTKNKR
Sbjct: 18 PTPQEAIQKLRETEEMLAEKQDFLEKKIDAELLIAKKNGTKNKR 61
>gi|317420021|emb|CBN82057.1| Charged multivesicular body protein 4c [Dicentrarchus labrax]
Length = 232
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI KLRETE+ML KKQ++LEK+I +E+ IA+ NGTKNKR
Sbjct: 30 GPSPQEAIHKLRETEEMLTKKQDYLEKRIEQELMIAKKNGTKNKR 74
>gi|281342008|gb|EFB17592.1| hypothetical protein PANDA_009936 [Ailuropoda melanoleuca]
Length = 193
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 39/47 (82%)
Query: 13 EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +G KNKR
Sbjct: 4 EKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGIKNKR 50
>gi|397524099|ref|XP_003832047.1| PREDICTED: charged multivesicular body protein 4b [Pan paniscus]
Length = 231
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GPT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 26 GPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 70
>gi|390336972|ref|XP_798689.2| PREDICTED: charged multivesicular body protein 4b-like
[Strongylocentrotus purpuratus]
Length = 214
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Query: 1 MSFFKNIFGKTE-EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F +FGK + E + EAIQKLR TE+ML+KKQEFLE K+ +E+ IA+ NGTKNKR
Sbjct: 1 MSGF--LFGKKKKEVTVSPAEAIQKLRSTEEMLVKKQEFLEGKVSKELVIAKQNGTKNKR 58
>gi|449672811|ref|XP_002161839.2| PREDICTED: charged multivesicular body protein 4b-like [Hydra
magnipapillata]
Length = 220
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 3/61 (4%)
Query: 1 MSFFKNIFGKTEEKG--PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS K IFG T++K PT EAIQ+LR+ E++L KK E LEKKI E++ IA+ GTKNK
Sbjct: 1 MSLAK-IFGSTKKKEDEPTASEAIQRLRQAEELLTKKSEHLEKKIAEQLEIAKKAGTKNK 59
Query: 59 R 59
R
Sbjct: 60 R 60
>gi|17532563|ref|NP_495337.1| Protein VPS-32.1 [Caenorhabditis elegans]
gi|351060497|emb|CCD68173.1| Protein VPS-32.1 [Caenorhabditis elegans]
Length = 221
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTG-EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F IFG +++ P+T E+IQKLRETE+ML KKQEFLEKK+ +E A GTKNKR
Sbjct: 1 MSLFGKIFGGRKQEAPSTPQESIQKLRETEEMLEKKQEFLEKKVIDEKQNAVKYGTKNKR 60
>gi|405946542|gb|EKC17665.1| Charged multivesicular body protein 4b [Crassostrea gigas]
Length = 214
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG K ++K P+ E IQ+LRE E+ML+KK +FLEKKI +E+ A+ GTKNK
Sbjct: 1 MSLLGKLFGSGKNKDKAPSPQEGIQRLREVEEMLMKKSDFLEKKIEQELTTAKKMGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|451327593|ref|NP_001263385.1| chromatin modifying protein 4B-like 1 [Rattus norvegicus]
gi|149065303|gb|EDM15379.1| rCG63680 [Rattus norvegicus]
Length = 224
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEK----GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGWGKAGKGDPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|432928672|ref|XP_004081171.1| PREDICTED: charged multivesicular body protein 4c-like [Oryzias
latipes]
Length = 223
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI +LRETE+ML KKQE+LEKKI +EI A+ +GTKNKR
Sbjct: 22 GPSAQEAIHRLRETEEMLTKKQEYLEKKIEQEIATAKKHGTKNKR 66
>gi|410330819|gb|JAA34356.1| chromatin modifying protein 4B [Pan troglodytes]
Length = 279
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 56 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 115
Query: 57 NKR 59
NKR
Sbjct: 116 NKR 118
>gi|308322317|gb|ADO28296.1| charged multivesicular body protein 4c [Ictalurus furcatus]
Length = 236
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI KLRETE+ML KKQE+LEKKI +EI IA+ N T+NKR
Sbjct: 34 GPSPQEAIHKLRETEEMLNKKQEYLEKKIEQEIMIAKKNDTRNKR 78
>gi|62955661|ref|NP_001017844.1| charged multivesicular body protein 4C [Danio rerio]
gi|62205140|gb|AAH92770.1| Chromatin modifying protein 4C [Danio rerio]
gi|182890702|gb|AAI65146.1| Chmp4c protein [Danio rerio]
Length = 239
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI +LRETE ML KKQE+LE +I +EI IA+ NGTKNKR
Sbjct: 37 GPSPQEAINRLRETEAMLTKKQEYLESRIEQEIVIAKKNGTKNKR 81
>gi|149030925|gb|EDL85952.1| rCG37275, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|28077049|ref|NP_083638.1| charged multivesicular body protein 4b [Mus musculus]
gi|24636295|sp|Q9D8B3.2|CHM4B_MOUSE RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b
gi|15030308|gb|AAH11429.1| Chromatin modifying protein 4B [Mus musculus]
gi|37590690|gb|AAH59279.1| Chmp4b protein [Mus musculus]
gi|74192743|dbj|BAE34888.1| unnamed protein product [Mus musculus]
gi|74224256|dbj|BAE33724.1| unnamed protein product [Mus musculus]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|431894311|gb|ELK04111.1| Charged multivesicular body protein 4b [Pteropus alecto]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSMFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|343961523|dbj|BAK62351.1| charged multivesicular body protein 4b [Pan troglodytes]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|28827795|ref|NP_789782.1| charged multivesicular body protein 4b [Homo sapiens]
gi|332248868|ref|XP_003273588.1| PREDICTED: charged multivesicular body protein 4b [Nomascus
leucogenys]
gi|402882733|ref|XP_003904888.1| PREDICTED: charged multivesicular body protein 4b [Papio anubis]
gi|426391420|ref|XP_004062072.1| PREDICTED: charged multivesicular body protein 4b [Gorilla
gorilla gorilla]
gi|24636296|sp|Q9H444.1|CHM4B_HUMAN RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b;
AltName: Full=SNF7 homolog associated with Alix 1;
AltName: Full=SNF7-2; Short=hSnf7-2; AltName:
Full=Vacuolar protein sorting-associated protein 32-2;
Short=Vps32-2; Short=hVps32-2
gi|21708120|gb|AAH33859.1| Chromatin modifying protein 4B [Homo sapiens]
gi|32879760|dbj|BAC79375.1| Snf7 homologue associated with Alix 1 [Homo sapiens]
gi|37362118|gb|AAQ91194.1| SNF7-2 [Homo sapiens]
gi|119596699|gb|EAW76293.1| chromatin modifying protein 4B, isoform CRA_a [Homo sapiens]
gi|119596700|gb|EAW76294.1| chromatin modifying protein 4B, isoform CRA_a [Homo sapiens]
gi|380809600|gb|AFE76675.1| charged multivesicular body protein 4b [Macaca mulatta]
gi|383410781|gb|AFH28604.1| charged multivesicular body protein 4b [Macaca mulatta]
gi|410210292|gb|JAA02365.1| chromatin modifying protein 4B [Pan troglodytes]
gi|410258840|gb|JAA17387.1| chromatin modifying protein 4B [Pan troglodytes]
gi|410296070|gb|JAA26635.1| chromatin modifying protein 4B [Pan troglodytes]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|344279871|ref|XP_003411709.1| PREDICTED: charged multivesicular body protein 4b-like [Loxodonta
africana]
Length = 224
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGTGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|426241344|ref|XP_004014551.1| PREDICTED: charged multivesicular body protein 4b [Ovis aries]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|291388698|ref|XP_002710845.1| PREDICTED: charged multivesicular body protein 4b [Oryctolagus
cuniculus]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|395830064|ref|XP_003788156.1| PREDICTED: charged multivesicular body protein 4b [Otolemur
garnettii]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|403281236|ref|XP_003932100.1| PREDICTED: charged multivesicular body protein 4b [Saimiri
boliviensis boliviensis]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|190360743|ref|NP_001121978.1| charged multivesicular body protein 4b [Bos taurus]
gi|116874509|gb|AAI23448.2| CHMP4B protein [Bos taurus]
gi|296481194|tpg|DAA23309.1| TPA: charged multivesicular body protein 4b [Bos taurus]
gi|440905129|gb|ELR55555.1| Charged multivesicular body protein 4b [Bos grunniens mutus]
Length = 224
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|387915570|gb|AFK11394.1| charged multivesicular body protein 4b [Callorhinchus milii]
Length = 216
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT +AIQKL ETE +L+KKQEFLE+K+ +EI AR +GTKNKR
Sbjct: 15 KAPTPQDAIQKLAETEGILVKKQEFLEQKVQQEIATARKHGTKNKR 60
>gi|296199794|ref|XP_002747315.1| PREDICTED: charged multivesicular body protein 4b [Callithrix
jacchus]
Length = 224
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|47213700|emb|CAF94593.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GPT EAI KLRETE+ML KKQEFLEKKI +E+ A+ +GTKNK+
Sbjct: 31 GPTPQEAIHKLRETEEMLTKKQEFLEKKIEQELMTAKKHGTKNKQ 75
>gi|417397419|gb|JAA45743.1| Hypothetical protein [Desmodus rotundus]
Length = 224
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|432101475|gb|ELK29657.1| Charged multivesicular body protein 4b [Myotis davidii]
Length = 287
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKSGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|348514566|ref|XP_003444811.1| PREDICTED: charged multivesicular body protein 4b-like
[Oreochromis niloticus]
Length = 222
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEEKGPTTG--EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS F IFG + G EAIQKLRETE+ML KKQEFLEKKI +E+ A+ NGTKNK
Sbjct: 1 MSVFGKIFGGGGKSGKGPSPQEAIQKLRETEEMLTKKQEFLEKKIEQELQTAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|348563857|ref|XP_003467723.1| PREDICTED: charged multivesicular body protein 4b-like [Cavia
porcellus]
Length = 224
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKMFGSGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|109092293|ref|XP_001105255.1| PREDICTED: charged multivesicular body protein 4b-like [Macaca
mulatta]
Length = 224
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQE+LEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEYLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|57529355|ref|NP_001006286.1| charged multivesicular body protein 4b [Gallus gallus]
gi|73917751|sp|Q5ZHP5.1|CHM4B_CHICK RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b
gi|53136838|emb|CAG32748.1| hypothetical protein RCJMB04_34n7 [Gallus gallus]
Length = 227
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P+ EAIQ+LR+TE+ML KKQEFLEKKI +E+ AR +GTKNKR
Sbjct: 22 PSPQEAIQRLRDTEEMLSKKQEFLEKKIEQELAAARKHGTKNKR 65
>gi|313747450|ref|NP_001186404.1| chromatin modifying protein 4C [Gallus gallus]
Length = 220
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 3 FFKNIFGKTEEKG---PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK G T KG P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GTKNKR
Sbjct: 7 FFKG-GGSTASKGRGGPSPQEALARLRETEEMLSKKQEYLESRIERELSLARQHGTKNKR 65
>gi|410925316|ref|XP_003976127.1| PREDICTED: charged multivesicular body protein 4b-like [Takifugu
rubripes]
Length = 222
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 36/44 (81%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT EAIQ+LRETE+ML KKQ+ LEKKI EE+ A+ NGTKNKR
Sbjct: 18 PTPQEAIQRLRETEEMLTKKQDHLEKKIEEELLTAKRNGTKNKR 61
>gi|308503506|ref|XP_003113937.1| CRE-VPS-32.1 protein [Caenorhabditis remanei]
gi|308263896|gb|EFP07849.1| CRE-VPS-32.1 protein [Caenorhabditis remanei]
Length = 255
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGE-AIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F IFG +++ P T + AIQKLRETE+ML KKQ+FLEKK+ +E A GTKNKR
Sbjct: 34 MSLFGKIFGGKKQEAPATPQDAIQKLRETEEMLEKKQDFLEKKVVDEKANAVKYGTKNKR 93
>gi|334310879|ref|XP_001381361.2| PREDICTED: charged multivesicular body protein 4b-like
[Monodelphis domestica]
Length = 225
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 5/64 (7%)
Query: 1 MSFFKNIFGKTEEKG-----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGT 55
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GT
Sbjct: 1 MSVFGKLFGAGGGKSGGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELASAKKHGT 60
Query: 56 KNKR 59
KNKR
Sbjct: 61 KNKR 64
>gi|432859823|ref|XP_004069254.1| PREDICTED: charged multivesicular body protein 4b-like, partial
[Oryzias latipes]
Length = 217
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 36/45 (80%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
T EAIQKLRETE+ML KKQ+FLEKKI +E+ A+ NGTKNKR
Sbjct: 17 AATPQEAIQKLRETEEMLAKKQDFLEKKIEQELITAKKNGTKNKR 61
>gi|149721415|ref|XP_001489156.1| PREDICTED: charged multivesicular body protein 4c-like [Equus
caballus]
Length = 245
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GT+NKR
Sbjct: 7 FFKGAGSSKSRAAPSPQEALARLRETEEMLGKKQEYLESRIQRELSLARKHGTQNKR 63
>gi|410909263|ref|XP_003968110.1| PREDICTED: charged multivesicular body protein 4c-like [Takifugu
rubripes]
Length = 233
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GPT EAI KLRETE+ML KKQ+FLEK+I +E+ A+ +GTKNK+
Sbjct: 31 GPTPQEAIHKLRETEEMLTKKQDFLEKRIEQELMTAKKHGTKNKQ 75
>gi|391343040|ref|XP_003745823.1| PREDICTED: charged multivesicular body protein 4b-like
[Metaseiulus occidentalis]
Length = 223
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 1 MSFFKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKN 57
MS +FG + K + +AIQ+LRE E+ML KKQ+FLEKK+ E+ A+ NGTKN
Sbjct: 1 MSLLSRLFGGGKSSAAKSMSPADAIQRLREVEEMLEKKQQFLEKKMEAELETAKKNGTKN 60
Query: 58 KR 59
KR
Sbjct: 61 KR 62
>gi|148227616|ref|NP_001085880.1| charged multivesicular body protein 4c [Xenopus laevis]
gi|73917758|sp|Q6GNN8.1|CHM4C_XENLA RecName: Full=Charged multivesicular body protein 4c; AltName:
Full=Chromatin-modifying protein 4c; Short=CHMP4c
gi|49119353|gb|AAH73466.1| MGC80980 protein [Xenopus laevis]
Length = 227
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
KGP+ EA+ KLRETE+ML KKQE+LEKKI E+ A+ +GTKNKR
Sbjct: 22 KGPSAQEALFKLRETEEMLTKKQEYLEKKIELELATAKKHGTKNKR 67
>gi|301614386|ref|XP_002936670.1| PREDICTED: charged multivesicular body protein 4c-like [Xenopus
(Silurana) tropicalis]
Length = 222
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
KGP+ EA+ KLRETE+ML KKQE+LEKKI E+ A+ +GTKNKR
Sbjct: 22 KGPSAQEALFKLRETEEMLTKKQEYLEKKIELELATAKKHGTKNKR 67
>gi|41055660|ref|NP_956489.1| charged multivesicular body protein 4b [Danio rerio]
gi|73917750|sp|Q7ZVC4.1|CHM4B_DANRE RecName: Full=Charged multivesicular body protein 4b; AltName:
Full=Chromatin-modifying protein 4b; Short=CHMP4b
gi|28277855|gb|AAH45919.1| Zgc:56112 [Danio rerio]
gi|182891708|gb|AAI65046.1| Zgc:56112 protein [Danio rerio]
Length = 220
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 20 EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EAIQ+LRETE+ML KKQEFLEKKI +E+ A+ NGTKNKR
Sbjct: 22 EAIQRLRETEEMLTKKQEFLEKKIEQELVTAKKNGTKNKR 61
>gi|392339649|ref|XP_003753867.1| PREDICTED: charged multivesicular body protein 4b-like [Rattus
norvegicus]
Length = 334
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 12 EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
E++ T EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 88 EQQPSTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 135
>gi|148674145|gb|EDL06092.1| chromatin modifying protein 4B [Mus musculus]
Length = 251
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 12 EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
E++ T EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 43 EQQPSTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 90
>gi|224046435|ref|XP_002199755.1| PREDICTED: charged multivesicular body protein 4c [Taeniopygia
guttata]
Length = 220
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EA+ +LRETE+ML KKQE+LE +I E+ +AR +GTKNKR
Sbjct: 21 GPSPQEALARLRETEEMLSKKQEYLETRIERELALARQHGTKNKR 65
>gi|268530508|ref|XP_002630380.1| C. briggsae CBR-VPS-32.1 protein [Caenorhabditis briggsae]
Length = 222
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGE-AIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F IFG +++ P+T + AIQKLRETE+ML KKQ+FLEKK+ +E A GTKNKR
Sbjct: 1 MSLFGKIFGGKKQEAPSTPQDAIQKLRETEEMLEKKQDFLEKKVVDEKANAVKYGTKNKR 60
>gi|57104538|ref|XP_542966.1| PREDICTED: charged multivesicular body protein 4b [Canis lupus
familiaris]
Length = 224
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|426235893|ref|XP_004011912.1| PREDICTED: charged multivesicular body protein 4c [Ovis aries]
Length = 236
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSAQEALARLRETEEMLGKKQEYLEGRIQRELSLARKHGTQNKR 63
>gi|355678841|gb|AER96234.1| chromatin modifying protein 4B [Mustela putorius furo]
Length = 183
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>gi|351708381|gb|EHB11300.1| Charged multivesicular body protein 4b, partial [Heterocephalus
glaber]
Length = 218
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT EAIQ+LR+TE+ML KK+EFLEKKI +E+ A+ +GTKNKR
Sbjct: 14 PTPQEAIQRLRDTEEMLNKKKEFLEKKIEQELTAAKKHGTKNKR 57
>gi|327271521|ref|XP_003220536.1| PREDICTED: charged multivesicular body protein 4b-like [Anolis
carolinensis]
Length = 227
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 35/40 (87%)
Query: 20 EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EAIQ+LR+TE+ML KKQEFLEKKI +E+ AR +GTKNKR
Sbjct: 26 EAIQRLRDTEEMLSKKQEFLEKKIEQELGAARKHGTKNKR 65
>gi|341901896|gb|EGT57831.1| hypothetical protein CAEBREN_03602 [Caenorhabditis brenneri]
Length = 222
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 1 MSFFKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F IFG K +E T +AIQKLRETE+ML KKQ+FLEKK+ +E A GTKNKR
Sbjct: 1 MSLFGKIFGGKKQEAAATPQDAIQKLRETEEMLEKKQDFLEKKVVDEKANAVKYGTKNKR 60
>gi|386783320|pdb|4ABM|A Chain A, Crystal Structure Of Chmp4b Hairpin
gi|386783321|pdb|4ABM|B Chain B, Crystal Structure Of Chmp4b Hairpin
gi|386783322|pdb|4ABM|C Chain C, Crystal Structure Of Chmp4b Hairpin
gi|386783323|pdb|4ABM|D Chain D, Crystal Structure Of Chmp4b Hairpin
Length = 79
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
G EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 1 GAMEQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 45
>gi|12846346|dbj|BAB27133.1| unnamed protein product [Mus musculus]
Length = 232
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGTRSSRARAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|13384940|ref|NP_079795.1| charged multivesicular body protein 4c [Mus musculus]
gi|73917756|sp|Q9D7F7.1|CHM4C_MOUSE RecName: Full=Charged multivesicular body protein 4c; AltName:
Full=Chromatin-modifying protein 4c; Short=CHMP4c
gi|12843970|dbj|BAB26186.1| unnamed protein product [Mus musculus]
gi|74227662|dbj|BAE35682.1| unnamed protein product [Mus musculus]
gi|109730983|gb|AAI17539.1| Chromatin modifying protein 4C [Mus musculus]
gi|109732518|gb|AAI15984.1| Chromatin modifying protein 4C [Mus musculus]
Length = 232
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGTRSSRARAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|281346036|gb|EFB21620.1| hypothetical protein PANDA_004508 [Ailuropoda melanoleuca]
Length = 188
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTKNKR
Sbjct: 3 PTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTKNKR 46
>gi|297706911|ref|XP_002830266.1| PREDICTED: charged multivesicular body protein 4b-like [Pongo
abelii]
Length = 224
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A +GT
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQEVGAAHQHGTS 60
Query: 57 NK 58
NK
Sbjct: 61 NK 62
>gi|301762034|ref|XP_002916472.1| PREDICTED: charged multivesicular body protein 4b-like
[Ailuropoda melanoleuca]
Length = 225
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTKNKR
Sbjct: 21 PTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTKNKR 64
>gi|114051754|ref|NP_001039441.1| charged multivesicular body protein 4c [Bos taurus]
gi|87578327|gb|AAI13332.1| Chromatin modifying protein 4C [Bos taurus]
gi|296480405|tpg|DAA22520.1| TPA: charged multivesicular body protein 4C [Bos taurus]
gi|440894484|gb|ELR46925.1| Charged multivesicular body protein 4c [Bos grunniens mutus]
Length = 236
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSAQEALARLRETEEMLGKKQEYLEGRIQRELSLARKHGTQNKR 63
>gi|354496007|ref|XP_003510119.1| PREDICTED: charged multivesicular body protein 4c-like
[Cricetulus griseus]
gi|344235964|gb|EGV92067.1| Charged multivesicular body protein 4c [Cricetulus griseus]
Length = 232
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGTRSSRARAAPSPQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|74147737|dbj|BAE38737.1| unnamed protein product [Mus musculus]
gi|74202979|dbj|BAE26197.1| unnamed protein product [Mus musculus]
Length = 232
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGTRSSRAWAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|291388197|ref|XP_002710707.1| PREDICTED: charged multivesicular body protein 4C-like
[Oryctolagus cuniculus]
Length = 233
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLSKKQEYLENRIQRELSLAKKHGTQNKR 63
>gi|410987373|ref|XP_003999979.1| PREDICTED: charged multivesicular body protein 4c [Felis catus]
Length = 237
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 FFKGGSSSKSRAAPSPQEALARLRETEEMLSKKQEYLENRIQRELALAKKHGTQNKR 63
>gi|355563207|gb|EHH19769.1| Protein CGI-301 [Macaca mulatta]
Length = 206
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 35/40 (87%)
Query: 20 EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 6 EAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 45
>gi|301762704|ref|XP_002916773.1| PREDICTED: charged multivesicular body protein 4c-like isoform 1
[Ailuropoda melanoleuca]
gi|281339683|gb|EFB15267.1| hypothetical protein PANDA_004880 [Ailuropoda melanoleuca]
Length = 237
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLSKKQEYLENRIQRELTLAKKHGTQNKR 63
>gi|149048444|gb|EDM00985.1| Snf7 homologue associated with Alix 3 [Rattus norvegicus]
Length = 123
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+M+ KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGSRSSRARAAPSAQEALARLRETEEMMAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|355678844|gb|AER96235.1| chromatin modifying protein 4C [Mustela putorius furo]
Length = 235
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLSKKQEYLENRIQRELTLAKKHGTQNKR 63
>gi|158081765|ref|NP_001017466.2| charged multivesicular body protein 4c [Rattus norvegicus]
Length = 232
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+M+ KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGSRSSRARAAPSAQEALARLRETEEMMAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|115534630|ref|NP_505022.2| Protein VPS-32.2 [Caenorhabditis elegans]
gi|351059090|emb|CCD66943.1| Protein VPS-32.2 [Caenorhabditis elegans]
Length = 217
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
Query: 1 MSFFKNIFGKTEEKGPTTG-EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTN----GT 55
MS F FG ++ P T E+IQKLRETED+L KKQEFLEKKI ++ + N GT
Sbjct: 1 MSLFSKFFGGMMQEAPITPQESIQKLRETEDILEKKQEFLEKKID---DVRKQNAVKYGT 57
Query: 56 KNKR 59
KNKR
Sbjct: 58 KNKR 61
>gi|298104112|ref|NP_001177119.1| charged multivesicular body protein 4c [Sus scrofa]
Length = 237
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQRELSLAKKHGTQNKR 63
>gi|302565616|ref|NP_001180914.1| charged multivesicular body protein 4c [Macaca mulatta]
gi|402878597|ref|XP_003902964.1| PREDICTED: charged multivesicular body protein 4c [Papio anubis]
gi|355698061|gb|EHH28609.1| Chromatin-modifying protein 4c [Macaca mulatta]
gi|355779789|gb|EHH64265.1| Chromatin-modifying protein 4c [Macaca fascicularis]
Length = 233
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>gi|391343042|ref|XP_003745824.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body
protein 4b-like [Metaseiulus occidentalis]
Length = 220
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFG--KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG + K ++ +AIQ+LRE E+ML KKQEFLE+K+ EI IA+ NGTKNK
Sbjct: 1 MSLLSRLFGGGASSVKTMSSADAIQRLREVEEMLGKKQEFLERKVDNEIEIAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|344273209|ref|XP_003408416.1| PREDICTED: charged multivesicular body protein 4c-like [Loxodonta
africana]
Length = 233
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQRELTLAKKHGTQNKR 63
>gi|340367979|ref|XP_003382530.1| PREDICTED: charged multivesicular body protein 4b-like
[Amphimedon queenslandica]
Length = 217
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
M +FG + + PT AIQKLRETE+ML KK EFLEKKI +E + + +G KNKR
Sbjct: 1 MEALARMFGAKKGEPPTPQMAIQKLRETEEMLNKKSEFLEKKIDQENALIKKHGLKNKR 59
>gi|22748643|ref|NP_689497.1| charged multivesicular body protein 4c [Homo sapiens]
gi|73917755|sp|Q96CF2.1|CHM4C_HUMAN RecName: Full=Charged multivesicular body protein 4c; AltName:
Full=Chromatin-modifying protein 4c; Short=CHMP4c;
AltName: Full=SNF7 homolog associated with Alix 3;
AltName: Full=SNF7-3; Short=hSnf7-3; AltName:
Full=Vacuolar protein sorting-associated protein 32-3;
Short=Vps32-3; Short=hVps32-3
gi|15680019|gb|AAH14321.1| Chromatin modifying protein 4C [Homo sapiens]
gi|35210502|dbj|BAC87888.1| Snf7 homologue associated with Alix 3 [Homo sapiens]
gi|37362120|gb|AAQ91195.1| SNF7-3 [Homo sapiens]
gi|119607513|gb|EAW87107.1| chromatin modifying protein 4C [Homo sapiens]
gi|189054731|dbj|BAG37388.1| unnamed protein product [Homo sapiens]
Length = 233
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>gi|387015202|gb|AFJ49720.1| Charged multivesicular body protein 4c-like [Crotalus adamanteus]
Length = 221
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 36/44 (81%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
PT EA+ +LRETE+ML KKQE+LE ++ +E+ +A+ +GT++KR
Sbjct: 25 PTPQEALARLRETEEMLTKKQEYLEARVAKELALAKKHGTRDKR 68
>gi|350021876|dbj|GAA33563.1| charged multivesicular body protein 4, partial [Clonorchis
sinensis]
Length = 168
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS FK FG + A ++L ET D+L KK EFLEKKI EE+N AR G KNK+
Sbjct: 1 MSTFKKFFGSKKNDASNAKAAAKQLEETRDLLTKKSEFLEKKIEEELNTARRYGMKNKK 59
>gi|410954076|ref|XP_003983693.1| PREDICTED: charged multivesicular body protein 4b [Felis catus]
Length = 218
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 9 GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K++ P +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTK +R
Sbjct: 7 AKSKSSSPAPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTKTRR 57
>gi|351703384|gb|EHB06303.1| Charged multivesicular body protein 4c [Heterocephalus glaber]
Length = 229
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 3 FFKNIFGKTE--EKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK G+T + P+ EA+ +LRETE+ML KKQE+LE +I E+ +AR +G++NKR
Sbjct: 7 FFKG--GRTSKGQAAPSAQEALVRLRETEEMLGKKQEYLESRIQRELALARKHGSQNKR 63
>gi|332240749|ref|XP_003269547.1| PREDICTED: charged multivesicular body protein 4c [Nomascus
leucogenys]
Length = 233
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>gi|395818289|ref|XP_003782566.1| PREDICTED: charged multivesicular body protein 4c [Otolemur
garnettii]
Length = 233
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPNPQEALARLRETEEMLGKKQEYLESRIQREVALAKKHGTQNKR 63
>gi|91085921|ref|XP_969855.1| PREDICTED: similar to shrub CG8055-PA [Tribolium castaneum]
gi|270009955|gb|EFA06403.1| hypothetical protein TcasGA2_TC009281 [Tribolium castaneum]
Length = 204
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFFK I G+ +K PT EAI++L+ TED L++KQ LE+K+ EI+ A+ + + NK+
Sbjct: 1 MSFFKKIRGQKPDKKPTLPEAIRRLKVTEDGLLRKQNSLEEKLKSEISNAKKHASTNKK 59
>gi|297683177|ref|XP_002819264.1| PREDICTED: charged multivesicular body protein 4c [Pongo abelii]
Length = 233
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>gi|332829015|ref|XP_528179.3| PREDICTED: charged multivesicular body protein 4c [Pan
troglodytes]
gi|397522525|ref|XP_003831314.1| PREDICTED: charged multivesicular body protein 4c [Pan paniscus]
Length = 233
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>gi|426360035|ref|XP_004047257.1| PREDICTED: charged multivesicular body protein 4c [Gorilla
gorilla gorilla]
Length = 233
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIAMAKKHGTQNKR 63
>gi|327269621|ref|XP_003219592.1| PREDICTED: charged multivesicular body protein 4c-like [Anolis
carolinensis]
Length = 221
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 36/44 (81%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P+ EA+ +LRETE+ML KKQE+LE +I +E+ +A+ +GT++KR
Sbjct: 25 PSPQEALARLRETEEMLTKKQEYLEARIAKELALAKKHGTRDKR 68
>gi|417397629|gb|JAA45848.1| Hypothetical protein [Desmodus rotundus]
Length = 237
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQRELVLAKKHGTHNKR 63
>gi|73917757|sp|Q569C1.1|CHM4C_RAT RecName: Full=Charged multivesicular body protein 4c; AltName:
Full=Chromatin-modifying protein 4c; Short=CHMP4c
gi|62201933|gb|AAH92576.1| Chromatin modifying protein 4C [Rattus norvegicus]
Length = 232
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRE E+M+ KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGSRSSRARAAPSAQEALARLREIEEMMAKKQEYLENRIQRELALAKKHGSQNKR 63
>gi|403298865|ref|XP_003940224.1| PREDICTED: charged multivesicular body protein 4c [Saimiri
boliviensis boliviensis]
Length = 233
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NK
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQREIALAKKHGTQNK 62
>gi|348588395|ref|XP_003479952.1| PREDICTED: charged multivesicular body protein 4c-like [Cavia
porcellus]
Length = 229
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FF+ P+ EA+ +LRETE+ML +KQE+LE +I E+ +AR GT+NKR
Sbjct: 7 FFQRGGSSKGRAAPSAQEALARLRETEEMLGRKQEYLESRIQRELALARRLGTQNKR 63
>gi|296226812|ref|XP_002759078.1| PREDICTED: charged multivesicular body protein 4c [Callithrix
jacchus]
Length = 233
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +G +NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQREIALAKKHGRQNKR 63
>gi|444514262|gb|ELV10553.1| Charged multivesicular body protein 4c [Tupaia chinensis]
Length = 233
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT+NKR
Sbjct: 7 LFKGGGSSKSRAAPSPQEALARLRETEEMLGKKQEYLENRIQRELALAKKHGTQNKR 63
>gi|440796497|gb|ELR17606.1| Vacuolarsorting protein SNF7, putative [Acanthamoeba castellanii
str. Neff]
Length = 224
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Query: 7 IFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+FGK ++ P+ ++I +LRET +ML K++EFLEKKI +E+ IA+ N +KNKR
Sbjct: 3 LFGK-KKTTPSPQQSIHRLRETIEMLTKREEFLEKKIEKELQIAKQNASKNKR 54
>gi|392346859|ref|XP_002729276.2| PREDICTED: charged multivesicular body protein 4b-like [Rattus
norvegicus]
Length = 331
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 12 EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
E++ T EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 88 EQQPSTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 132
>gi|126320991|ref|XP_001367000.1| PREDICTED: charged multivesicular body protein 4c-like
[Monodelphis domestica]
Length = 232
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FK + P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +GT NKR
Sbjct: 7 LFKGGNSSKSKAAPSAQEALARLRETEEMLGKKQEYLETRIQRELALAKKHGTHNKR 63
>gi|57107811|ref|XP_535115.1| PREDICTED: charged multivesicular body protein 4c isoform 1
[Canis lupus familiaris]
Length = 236
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P+ EA+ +LRETE+ML KKQE+LE ++ E+ +A+ +GT+N R
Sbjct: 19 APSPQEALARLRETEEMLSKKQEYLEARVQRELTLAKKHGTRNPR 63
>gi|148673213|gb|EDL05160.1| RIKEN cDNA 2310010I16 [Mus musculus]
Length = 272
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 47 FFKGTRSSRARAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 103
>gi|395510936|ref|XP_003759722.1| PREDICTED: charged multivesicular body protein 4c [Sarcophilus
harrisii]
Length = 232
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK + PT EA+ +LRETE++L KKQE+LE +I +E+ +A+ +GT+NKR
Sbjct: 7 FFKRGDSSKGKAVPTPQEALARLRETEEILGKKQEYLETRIQKELALAKKHGTQNKR 63
>gi|29841209|gb|AAP06222.1| SJCHGC01931 protein [Schistosoma japonicum]
Length = 220
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 16 PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
P T AIQKLRET +ML KK FLE K+ E+I+IA+ G KNKR
Sbjct: 16 PETQVAIQKLRETHEMLTKKSAFLEGKVEEQISIAKRYGLKNKR 59
>gi|198422871|ref|XP_002125355.1| PREDICTED: similar to charged multivesicular body protein 4c
[Ciona intestinalis]
Length = 217
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 3 FFKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FKN+FG K +EK ++ EAIQKLR+T +ML KK E LE KI E+ A+ +GTKNK+
Sbjct: 1 MFKNMFGGGSKGKEK-VSSQEAIQKLRDTAEMLQKKSEHLEVKIERELKTAKQHGTKNKK 59
>gi|256079234|ref|XP_002575894.1| snf7-related [Schistosoma mansoni]
gi|353232742|emb|CCD80097.1| snf7-related [Schistosoma mansoni]
Length = 221
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F + P T AI KLRET +ML KK FLE K+ E+I +A+ G KNKR
Sbjct: 1 MSSLSKFFKSKKNDKPETQTAIHKLRETHEMLTKKSAFLEGKVDEQIVLAKKYGLKNKR 59
>gi|256079236|ref|XP_002575895.1| snf7-related [Schistosoma mansoni]
gi|353232741|emb|CCD80096.1| snf7-related [Schistosoma mansoni]
Length = 218
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F + P T AI KLRET +ML KK FLE K+ E+I +A+ G KNKR
Sbjct: 1 MSSLSKFFKSKKNDKPETQTAIHKLRETHEMLTKKSAFLEGKVDEQIVLAKKYGLKNKR 59
>gi|410055076|ref|XP_003316914.2| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
4b, partial [Pan troglodytes]
Length = 290
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 1 MSFFKNIFGKTEEKG----PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K PT LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 67 MSVFGKLFGAGGGKAGKGGPTPRRPXPALRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 126
Query: 57 NKR 59
+KR
Sbjct: 127 HKR 129
>gi|156538585|ref|XP_001607499.1| PREDICTED: charged multivesicular body protein 4b-like [Nasonia
vitripennis]
Length = 211
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 6/61 (9%)
Query: 3 FFKNIFGK----TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
F IFGK T +K T EAIQ+LR+ E++L K+Q+FLE K+ +E IAR N KNK
Sbjct: 4 LFAKIFGKKKKITMQK--TADEAIQELRKIEELLGKRQDFLESKMKQEETIARQNSNKNK 61
Query: 59 R 59
R
Sbjct: 62 R 62
>gi|196003242|ref|XP_002111488.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190585387|gb|EDV25455.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 213
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 8 FGKTEEKGP-TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GK ++ GP TT +AIQKLRETE+ML KK ++E KI EI I + + NKR
Sbjct: 1 MGKKKQGGPPTTSDAIQKLRETEEMLEKKSSYIEGKIDSEITIIKKHVRTNKR 53
>gi|328768429|gb|EGF78475.1| hypothetical protein BATDEDRAFT_26522 [Batrachochytrium
dendrobatidis JAM81]
Length = 221
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 6 NIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
++FGK + T +AI KLRE+ +ML K++++L+ KI E+ IA+ N KNKR
Sbjct: 2 HLFGKAKAAQTTPKDAIVKLRESLEMLEKREKYLQTKIDAELKIAKLNAAKNKR 55
>gi|354477991|ref|XP_003501200.1| PREDICTED: charged multivesicular body protein 4b-like
[Cricetulus griseus]
Length = 238
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%)
Query: 24 KLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+ R+TE+ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 42 RXRDTEEMLSKKQEFLEKKIEQELTAAKKHGTKNKR 77
>gi|156389124|ref|XP_001634842.1| predicted protein [Nematostella vectensis]
gi|156221929|gb|EDO42779.1| predicted protein [Nematostella vectensis]
Length = 225
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 31/42 (73%)
Query: 18 TGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
T +AI KLRETE +L KKQE+LE++I E N A+ N KNKR
Sbjct: 29 TQQAIWKLRETEKLLEKKQEYLEQRIEIETNTAKANVKKNKR 70
>gi|313226027|emb|CBY21170.1| unnamed protein product [Oikopleura dioica]
Length = 209
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKRE 60
PT EAI+KLRETE+ML+KK E E I E+ A+ +G KNKR+
Sbjct: 10 APTPEEAIRKLRETEEMLLKKSEHTETLIKNELLNAKKHGMKNKRQ 55
>gi|393215752|gb|EJD01243.1| hypothetical protein FOMMEDRAFT_158374 [Fomitiporia mediterranea
MF3/22]
Length = 251
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F + FG ++ TT EAI LR+ ML KK+E L+KK+ EE+ AR N NK+
Sbjct: 1 MSGFMSYFGGRKDPKQTTREAIVTLRQQLQMLEKKEEHLQKKVEEEMKKARANAVTNKQ 59
>gi|402217411|gb|EJT97491.1| Snf7-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 219
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS + N+FG ++ T +AI LR+ ML KK+EF +KKI E + AR N NK
Sbjct: 1 MSSWLNLFGGRKDPKSTARDAIVNLRQQLGMLEKKEEFTQKKIDEAMRTARANAVSNK 58
>gi|390601522|gb|EIN10916.1| Snf7-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 221
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + + +AI LR+ ML KK+E+L+KKI EE+ A+ N T NK
Sbjct: 2 MASFMSYFGGRRDPKQSARDAIVTLRQQLQMLEKKEEYLQKKINEEVAKAKANATTNK 59
>gi|389747186|gb|EIM88365.1| vacuolar-sorting protein SNF7 [Stereum hirsutum FP-91666 SS1]
Length = 219
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + + +AI LRE M+ KK+++L+KKI EE+ A+TN T NK
Sbjct: 2 MASFMSYFGGRRDPKQSARDAIVTLREQLHMIEKKEDYLQKKIDEELKRAKTNATSNK 59
>gi|336373620|gb|EGO01958.1| hypothetical protein SERLA73DRAFT_132664 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386439|gb|EGO27585.1| hypothetical protein SERLADRAFT_382747 [Serpula lacrymans var.
lacrymans S7.9]
Length = 219
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + T +AI LR+ M+ KK+E+L+KKI EE+ AR N NK
Sbjct: 2 MASFMSYFGGKRDPKKTARDAIVDLRQQLQMIEKKEEYLQKKIDEELKKARANAVSNK 59
>gi|353239898|emb|CCA71790.1| related to SNF7 protein [Piriformospora indica DSM 11827]
Length = 220
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS + + F + TT +AI LRE ML KK+E LEKKI EE AR N T NK
Sbjct: 1 MSGWISYFTGARDTKATTRQAIVGLREQLSMLDKKEEHLEKKIAEETKKARENATTNK 58
>gi|443894199|dbj|GAC71549.1| protein involved in glucose derepression and pre-vacuolar
endosome protein sorting [Pseudozyma antarctica T-34]
Length = 222
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + N+FGK + K T +AI +LR+ ML KK+E L KKI +E+ A+ N T NKR
Sbjct: 1 MSGWMNLFGKKDNKN-TARDAIVELRKQLLMLEKKEEHLNKKIDDELKKAKANVTTNKR 58
>gi|170091764|ref|XP_001877104.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648597|gb|EDR12840.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 219
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + + +AI LR+ M+ KK+E+L+KKI EE+ AR N NK
Sbjct: 2 MASFMSYFGARRDPKQSARDAIVGLRQQLQMIEKKEEYLQKKIDEEMKKARANAVSNK 59
>gi|320168914|gb|EFW45813.1| hypothetical protein CAOG_03797 [Capsaspora owczarzaki ATCC
30864]
Length = 223
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 7 IFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+FGK + P +AIQ LRET + L K+++FLEKK+ E+ A+ +KNK+
Sbjct: 3 LFGKPKPAAPVPRDAIQHLRETIETLEKREKFLEKKMEAELETAKRLVSKNKK 55
>gi|308502656|ref|XP_003113512.1| hypothetical protein CRE_26323 [Caenorhabditis remanei]
gi|308263471|gb|EFP07424.1| hypothetical protein CRE_26323 [Caenorhabditis remanei]
Length = 234
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI LR+ E++LIKKQE+ E +I +EI A+ + NK+
Sbjct: 31 KAPTAEEAIGNLRDAEELLIKKQEYFELRIEQEIEAAKKHMKTNKK 76
>gi|397491439|ref|XP_003816671.1| PREDICTED: LOW QUALITY PROTEIN: charged multivesicular body protein
4a-like [Pan paniscus]
Length = 275
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEI-------NIARTN 53
MS + K +++ T E I KL+ETE+M+ KKQEFLE+ I E+ +++ +
Sbjct: 35 MSGPSKLLRKEQKRSETPEETIXKLKETEEMVSKKQEFLEQTIQHELFISSIENRLSKNH 94
Query: 54 GTKNKR 59
G+KNKR
Sbjct: 95 GSKNKR 100
>gi|409050325|gb|EKM59802.1| hypothetical protein PHACADRAFT_250534 [Phanerochaete carnosa
HHB-10118-sp]
Length = 218
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 4 FKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
F + FG + ++ +AI LR+ M+ KK+E+L+KKI EE+N AR N NK
Sbjct: 5 FMSYFGGRRDPKMSSRDAIVTLRQQLQMVEKKEEYLQKKIEEELNKARANAVSNK 59
>gi|343425949|emb|CBQ69482.1| related to SNF7 protein [Sporisorium reilianum SRZ2]
Length = 225
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + N FGK E K + +AI LR+ ML KK+E L KKI EE+ A+ N T NKR
Sbjct: 1 MSSWLNFFGKKENKN-SARDAIVGLRQQLLMLEKKEEHLNKKIEEELKKAKANVTTNKR 58
>gi|25149598|ref|NP_495206.2| Protein R12C12.5 [Caenorhabditis elegans]
gi|351064028|emb|CCD72323.1| Protein R12C12.5 [Caenorhabditis elegans]
Length = 236
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI LR+ E++LIKKQE+ E +I +E+ A+ NK+
Sbjct: 32 KAPTADEAIGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKK 77
>gi|189308090|gb|ACD86929.1| endosomal sorting complex subunit [Caenorhabditis brenneri]
Length = 202
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI LR+ E++LIKKQE+ E +I +E+ A+ NK+
Sbjct: 29 KAPTAEEAIGNLRDAEELLIKKQEYFELRIEQEVEAAKKYMKTNKK 74
>gi|341892865|gb|EGT48800.1| hypothetical protein CAEBREN_30433 [Caenorhabditis brenneri]
Length = 231
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI LR+ E++LIKKQE+ E +I +E+ A+ NK+
Sbjct: 27 KAPTAEEAIGNLRDAEELLIKKQEYFELRIEQEVEAAKKYMKTNKK 72
>gi|341892401|gb|EGT48336.1| hypothetical protein CAEBREN_04705 [Caenorhabditis brenneri]
Length = 231
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI LR+ E++LIKKQE+ E +I +E+ A+ NK+
Sbjct: 27 KAPTAEEAIGNLRDAEELLIKKQEYFELRIEQEVEAAKKYMKTNKK 72
>gi|212274673|ref|NP_001130288.1| uncharacterized protein LOC100191382 [Zea mays]
gi|194688756|gb|ACF78462.1| unknown [Zea mays]
Length = 222
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEEKGPTTGEA-IQKLRETEDMLIKKQEFLEKKIGEEINIART-NGTKNK 58
MS F IFGK +E+ ++ A + KL ET DML KK++ L+KK E+ A+ + KNK
Sbjct: 1 MSMFNRIFGKPKEQANSSALATLDKLNETLDMLEKKEKVLDKKAAAELERAKEFSKAKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|268531452|ref|XP_002630852.1| Hypothetical protein CBG02567 [Caenorhabditis briggsae]
Length = 233
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K PT EAI L++ E++LIKKQE+ E +I +EI A+ + NK+
Sbjct: 32 KAPTAEEAIGNLKDAEELLIKKQEYFELRIEQEIEAAKKHMKTNKK 77
>gi|388582378|gb|EIM22683.1| Snf7-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 228
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 SFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
S+ I GK + +G + +AI LR ML KK+E L KKI EE+ A+ N T NKR
Sbjct: 3 SWMSWIVGKKDNRG-SARDAIVGLRSQLLMLDKKEEHLNKKIEEELKKAKANATSNKR 59
>gi|321253083|ref|XP_003192623.1| late endosome to vacuole transport-related protein [Cryptococcus
gattii WM276]
gi|317459092|gb|ADV20836.1| late endosome to vacuole transport-related protein, putative
[Cryptococcus gattii WM276]
Length = 220
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + + F ++ + +AI LR+ ML KK+EFL+KKI EE+ A+ N T NKR
Sbjct: 1 MSGWMSYFTGRKDTRESARDAIVGLRQQLLMLEKKEEFLQKKIDEEMKKAKANATSNKR 59
>gi|169860985|ref|XP_001837127.1| vacuolar-sorting protein SNF7 [Coprinopsis cinerea okayama7#130]
gi|116501849|gb|EAU84744.1| vacuolar-sorting protein SNF7 [Coprinopsis cinerea okayama7#130]
Length = 217
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG ++ EAI LR+ M+ KK+E+L+KKI EE+ AR N NK
Sbjct: 2 MASFMSYFGARKDPKKAAREAIVSLRQQLQMIEKKEEYLQKKIEEEMKKARANAVSNK 59
>gi|302694061|ref|XP_003036709.1| hypothetical protein SCHCODRAFT_48553 [Schizophyllum commune
H4-8]
gi|300110406|gb|EFJ01807.1| hypothetical protein SCHCODRAFT_48553 [Schizophyllum commune
H4-8]
Length = 217
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS +FG + + +AI LR+ M+ KK+EFL+KKI EE+ A+ N NK
Sbjct: 2 MSGLMGLFGARRDPKQSARDAIVGLRQHLQMIEKKEEFLQKKIEEELKKAKANAVSNK 59
>gi|444729142|gb|ELW69569.1| Charged multivesicular body protein 4b [Tupaia chinensis]
Length = 335
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 31 MLIKKQEFLEKKIGEEINIARTNGTKNKR 59
ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 1 MLSKKQEFLEKKIEQELTAAKKHGTKNKR 29
>gi|149030924|gb|EDL85951.1| rCG37275, isoform CRA_a [Rattus norvegicus]
Length = 169
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 31 MLIKKQEFLEKKIGEEINIARTNGTKNKR 59
ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 1 MLSKKQEFLEKKIEQELTAAKKHGTKNKR 29
>gi|344246645|gb|EGW02749.1| Charged multivesicular body protein 4b [Cricetulus griseus]
Length = 190
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 31 MLIKKQEFLEKKIGEEINIARTNGTKNKR 59
ML KKQEFLEKKI +E+ A+ +GTKNKR
Sbjct: 1 MLSKKQEFLEKKIEQELTAAKKHGTKNKR 29
>gi|195617452|gb|ACG30556.1| charged multivesicular body protein 4b [Zea mays]
Length = 208
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIFGKTEEKGPTTGEA-IQKLRETEDMLIKKQEFLEKKIGEEINIART-NGTKNK 58
MS F IFGK +E+ ++ A + KL +T DML KK++ L+KK E+ A+ + KNK
Sbjct: 1 MSMFNRIFGKPKEQANSSALATLDKLNDTLDMLEKKEKVLDKKAAAELERAKEFSKAKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|403417362|emb|CCM04062.1| predicted protein [Fibroporia radiculosa]
Length = 220
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + ++ +AI LR+ M+ KK+E L+KKI EE+ A++N NK
Sbjct: 2 MAGFMSYFGGRRDTKQSSRDAIVTLRQQLQMIDKKEEHLQKKIDEELKKAKSNAVTNK 59
>gi|403419340|emb|CCM06040.1| predicted protein [Fibroporia radiculosa]
Length = 407
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKRE 60
M+ F + FG + ++ +AI LR+ M+ KK+E+L+KKI +E+ A+ N NK
Sbjct: 1 MAAFMSYFGGRRDPKESSRDAIVTLRQQLQMIDKKEEYLQKKIDDELKKAKANAVANKNG 60
Query: 61 FDH 63
H
Sbjct: 61 KQH 63
>gi|388856231|emb|CCF50222.1| related to SNF7 protein [Ustilago hordei]
Length = 225
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + N FGK + K + +AI LR+ ML KK+E L +KI +E+ A+ N T NKR
Sbjct: 1 MSGWLNYFGKKDNKN-SARDAIVGLRQQLLMLEKKEEHLNQKIDDELKKAKANVTTNKR 58
>gi|392573401|gb|EIW66541.1| hypothetical protein TREMEDRAFT_40846 [Tremella mesenterica DSM
1558]
Length = 222
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F + +T EAI LR+T ML KK+E+L+++I E + AR N T NKR
Sbjct: 1 MSGLMGWFSGRKNTRESTTEAIVGLRQTLLMLQKKEEYLQRQIDEAEDRARKNATTNKR 59
>gi|351698736|gb|EHB01655.1| Charged multivesicular body protein 4b [Heterocephalus glaber]
Length = 150
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 31 MLIKKQEFLEKKIGEEINIARTNGTKNKR 59
ML KKQEFLEKKI +E+ A +GTKNKR
Sbjct: 1 MLSKKQEFLEKKIEQELTPAEKHGTKNKR 29
>gi|58264512|ref|XP_569412.1| late endosome to vacuole transport-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110057|ref|XP_776239.1| hypothetical protein CNBC6300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819481|sp|P0CR55.1|SNF7_CRYNB RecName: Full=Vacuolar-sorting protein SNF7; AltName:
Full=Vacuolar protein-sorting-associated protein 32
gi|338819482|sp|P0CR54.1|SNF7_CRYNJ RecName: Full=Vacuolar-sorting protein SNF7; AltName:
Full=Vacuolar protein-sorting-associated protein 32
gi|50258911|gb|EAL21592.1| hypothetical protein CNBC6300 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225644|gb|AAW42105.1| late endosome to vacuole transport-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 220
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + + F ++ + +AI LR+ ML KK+EFL+KKI EE+ A+ N T NKR
Sbjct: 1 MSGWMSYFTGRKDTRESARDAIVGLRQQLLMLEKKEEFLQKKIEEEMKKAKANATGNKR 59
>gi|405123023|gb|AFR97788.1| vacuolar-sorting protein SNF7 [Cryptococcus neoformans var.
grubii H99]
Length = 220
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + + F ++ + +AI LR+ ML KK+EFL+KKI EE+ A+ N T NKR
Sbjct: 1 MSGWMSYFTGRKDTRESARDAIVGLRQQLLMLEKKEEFLQKKIEEEMKKAKANATGNKR 59
>gi|19115183|ref|NP_594271.1| ESCRT III complex subunit Vps32 [Schizosaccharomyces pombe 972h-]
gi|74625384|sp|Q9P7F7.1|SNF7_SCHPO RecName: Full=Vacuolar-sorting protein snf7; AltName:
Full=Vacuolar protein-sorting-associated protein 32
gi|7211055|emb|CAB77014.1| ESCRT III complex subunit Vps32 [Schizosaccharomyces pombe]
Length = 222
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F FG K TT + I + +E + KK+E LE++I E+ IAR N T NKR
Sbjct: 1 MSGFLRWFGGNRSKD-TTKDTIVRFQEMLALYDKKEEVLERQIAEQTEIARKNATTNKR 58
>gi|71021957|ref|XP_761209.1| hypothetical protein UM05062.1 [Ustilago maydis 521]
gi|46100689|gb|EAK85922.1| hypothetical protein UM05062.1 [Ustilago maydis 521]
Length = 225
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS + + FGK + K + +AI LR+ ML KK+E L KKI +E+ A+ N T NKR
Sbjct: 1 MSSWSSWFGKKDNKN-SARDAIVGLRQQLLMLEKKEEHLNKKIEDELKKAKANVTTNKR 58
>gi|193629661|ref|XP_001951543.1| PREDICTED: charged multivesicular body protein 4b-like
[Acyrthosiphon pisum]
Length = 225
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 1 MSFFKNIFG--KTEEKGPTTG---EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGT 55
MSF + +FG K E KGP+ +A++KLR TE +L K E L+ I E + + N
Sbjct: 1 MSFLRKLFGRKKKEIKGPSRSTEVDALEKLRSTEQLLRDKSEALKTNIETEQSTVKENVI 60
Query: 56 KNKR 59
KNK+
Sbjct: 61 KNKQ 64
>gi|392568275|gb|EIW61449.1| hypothetical protein TRAVEDRAFT_44269 [Trametes versicolor
FP-101664 SS1]
Length = 232
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ + FG + ++ +AI LR+ M+ KK+E+L+KKI EE+ AR N NK
Sbjct: 1 MAGIMSYFGGRRDPKQSSRDAIVTLRQQLQMIEKKEEYLQKKIEEEVKKARANAVSNK 58
>gi|326917819|ref|XP_003205192.1| PREDICTED: charged multivesicular body protein 4c-like [Meleagris
gallopavo]
Length = 184
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 31 MLIKKQEFLEKKIGEEINIARTNGTKNKR 59
ML KKQE+LE +I E+ +AR +GTKN+R
Sbjct: 1 MLSKKQEYLETRIERELALARQHGTKNRR 29
>gi|238594324|ref|XP_002393452.1| hypothetical protein MPER_06814 [Moniliophthora perniciosa FA553]
gi|215460944|gb|EEB94382.1| hypothetical protein MPER_06814 [Moniliophthora perniciosa FA553]
Length = 106
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F ++FG ++ + +AI LR+ M+ KK+E+L+K++G ++ A+ N N+
Sbjct: 1 MASFMSMFGGRKDPKQSARDAIVGLRQQLQMIEKKEEYLQKRMGRKLKKAKANAVSNQ 58
>gi|313226028|emb|CBY21171.1| unnamed protein product [Oikopleura dioica]
Length = 234
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 8 FGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
FGKT +K EAIQ+LR E +L KK E +E KI EI A+ G KNK
Sbjct: 5 FGKTIQK---PDEAIQRLRGMEKLLEKKIEMIEVKIAAEIKEAKKLGIKNK 52
>gi|395330405|gb|EJF62788.1| hypothetical protein DICSQDRAFT_154054 [Dichomitus squalens
LYAD-421 SS1]
Length = 217
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ + FG + ++ +AI LR+ M+ KK+++L+KKI EE+ A+ N NK
Sbjct: 2 MAGIMSYFGGRRDPKQSSRDAIVTLRQQLQMIEKKEDYLQKKIDEEMKKAKQNAVSNK 59
>gi|392593037|gb|EIW82363.1| vacuolar-sorting protein SNF7 [Coniophora puteana RWD-64-598 SS2]
Length = 216
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + +AI LR+ ++ KK+E L++K+ EE+ AR N NK
Sbjct: 2 MASFMSYFGGRRDTKQAARDAIVGLRQQLQLIEKKEEHLQRKVEEELKKARANAVSNK 59
>gi|398412762|ref|XP_003857699.1| hypothetical protein MYCGRDRAFT_98206 [Zymoseptoria tritici
IPO323]
gi|339477584|gb|EGP92675.1| hypothetical protein MYCGRDRAFT_98206 [Zymoseptoria tritici
IPO323]
Length = 224
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 4 FKNIFG---KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
F N+FG T++ P AI +LR T +ML K+++ LE ++ E+ IAR N + NK
Sbjct: 6 FANLFGGGAATKKDAPKN--AILRLRSTLEMLSKREKHLENQMAEQDAIARKNVSANK 61
>gi|322699691|gb|EFY91451.1| ESCRT-III component [Metarhizium acridum CQMa 102]
Length = 223
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 9 GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
G + + + AI LR DML K+++ L+ +I E+ NIAR N T NK
Sbjct: 8 GSAQSRKDSPKNAILNLRSQLDMLQKREKHLQNQIEEQHNIARKNATTNK 57
>gi|322710219|gb|EFZ01794.1| ESCRT-III component [Metarhizium anisopliae ARSEF 23]
Length = 223
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 9 GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
G + + + AI LR DML K+++ L+ +I E+ NIAR N T NK
Sbjct: 8 GSAQSRKDSPKNAILNLRSQLDMLQKREKHLQNQIEEQQNIARKNATTNK 57
>gi|385304680|gb|EIF48689.1| vacuolar sorting protein snf7 [Dekkera bruxellensis AWRI1499]
Length = 224
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
+ FG ++K +AI KLRE L KKQ +LEK+I ++ IAR N TKN+
Sbjct: 1 MWNYFFGGGQQKKELPKKAIVKLREHIATLNKKQGYLEKQIEQQEQIARKNVTKNR 56
>gi|164655263|ref|XP_001728762.1| hypothetical protein MGL_4097 [Malassezia globosa CBS 7966]
gi|159102646|gb|EDP41548.1| hypothetical protein MGL_4097 [Malassezia globosa CBS 7966]
Length = 267
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+F + GK + K T +AI LRE ++ KK+E L+ KI EE+ A+ N T NKR
Sbjct: 52 WFSWVSGKRDNKN-TARDAIIGLREQLHLIAKKEEHLQTKIDEELRKAKDNVTSNKR 107
>gi|409079969|gb|EKM80330.1| hypothetical protein AGABI1DRAFT_84793 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 219
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + +AI LR+ +L KK+E L+KKI +E+ AR N NK
Sbjct: 2 MASFMSYFGGRRDPKQAARDAIVGLRQQLQLLEKKEEHLQKKIDDEMVKARANAVSNK 59
>gi|426198269|gb|EKV48195.1| hypothetical protein AGABI2DRAFT_191825 [Agaricus bisporus var.
bisporus H97]
Length = 219
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
M+ F + FG + +AI LR+ +L KK+E L+KKI +E+ AR N NK
Sbjct: 2 MASFMSYFGGRRDPKQAARDAIVGLRQQLQLLEKKEEHLQKKIDDEMVKARANAVSNK 59
>gi|307110550|gb|EFN58786.1| hypothetical protein CHLNCDRAFT_56887 [Chlorella variabilis]
Length = 525
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 17 TTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+T +AIQKL ETE++L K+++ LEKKI E+ A+ +N +
Sbjct: 34 STIDAIQKLGETEELLSKRRDLLEKKIAAELERAKVFLKQNNK 76
>gi|213403450|ref|XP_002172497.1| vacuolar sorting protein Vps32 [Schizosaccharomyces japonicus
yFS275]
gi|212000544|gb|EEB06204.1| vacuolar sorting protein Vps32 [Schizosaccharomyces japonicus
yFS275]
Length = 222
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 2 SFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
SFF+ G +EK T + I K +E + KK+E LEK+I ++ IAR N T NKR
Sbjct: 3 SFFRWFGGGNKEKD-TAKDTIVKFQEMLSLFDKKEEKLEKQIEQQNEIARKNATANKR 59
>gi|258576573|ref|XP_002542468.1| vacuolar sorting protein snf-7 [Uncinocarpus reesii 1704]
gi|237902734|gb|EEP77135.1| vacuolar sorting protein snf-7 [Uncinocarpus reesii 1704]
Length = 223
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 2 SFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
SFF ++++ P AI LR+ DML K++++LE ++ E+ IAR N T NK
Sbjct: 3 SFFGGGSAQSKKDAPKN--AILSLRQQLDMLQKREKYLETQMMEQDAIARKNVTTNK 57
>gi|393241043|gb|EJD48567.1| late endosome to vacuole transport-related protein [Auricularia
delicata TFB-10046 SS5]
Length = 216
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS + + F + T EAI LR ML KK+E L++KI EE+ A+ N NK
Sbjct: 1 MSGWMSYFTGRRDPKVTAREAIVTLRTQLQMLEKKEENLQRKIDEELKKAKANAVSNK 58
>gi|453085959|gb|EMF14001.1| ESCRT-III component [Mycosphaerella populorum SO2202]
Length = 227
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 4 FKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
+ N+FG T K AI +LR T +ML K+++ L+ ++ E+ +AR N T NK
Sbjct: 6 WGNLFGGSTAAKKDAPKNAILRLRSTLEMLSKREKHLQNQMDEQDAVARKNVTSNK 61
>gi|242767002|ref|XP_002341283.1| SNF7 family protein [Talaromyces stipitatus ATCC 10500]
gi|218724479|gb|EED23896.1| SNF7 family protein [Talaromyces stipitatus ATCC 10500]
Length = 223
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 SFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
S+F + P EAI KLRE DML K+++ LE +I E+ IA+ N T NK
Sbjct: 3 SWFGGQSAQKRRDAPK--EAILKLREQLDMLQKREKHLENQIVEQEAIAKKNVTTNK 57
>gi|290462791|gb|ADD24443.1| Charged multivesicular body protein 4b [Lepeophtheirus salmonis]
gi|290561799|gb|ADD38297.1| Charged multivesicular body protein 4b [Lepeophtheirus salmonis]
Length = 225
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 1 MSFFKNIF--GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MSF +F GK E+ T +AI +LR E++L KKQ LEKKI EEI IAR N NK
Sbjct: 1 MSFISKMFGSGKKGEEVTTPNQAIDRLRSIEELLNKKQSHLEKKIEEEIEIARKNAKTNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>gi|384253041|gb|EIE26516.1| Snf7-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 242
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 18 TGEAIQKLRETEDMLIKKQEFLEKKIGEEINIART-NGTKNKR 59
T +AIQKL ETE++L+K++ LEKKI +E+ A+ +NKR
Sbjct: 28 TVDAIQKLGETEELLVKRRSLLEKKIAQELEKAKEYTKAQNKR 70
>gi|452983478|gb|EME83236.1| hypothetical protein MYCFIDRAFT_45948 [Pseudocercospora fijiensis
CIRAD86]
Length = 226
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 4 FKNIFG-KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
+ N+FG K AI +LR T +ML K+++ L+ ++ E+ IAR N T NK
Sbjct: 6 WNNLFGGSAAAKKDAPKNAILRLRSTLEMLSKREKHLQNQMDEQDAIARKNVTSNK 61
>gi|443924836|gb|ELU43791.1| Snf7 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 677
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS + + F ++ T +AI R+ +L KK+E L++KI EE+ A+ N NK
Sbjct: 502 MSGWLSYFTGKKDTRQTARDAIVNTRQHLAVLDKKEENLQRKIEEELKKAKANAVSNK 559
>gi|328868716|gb|EGG17094.1| SNF7 family protein [Dictyostelium fasciculatum]
Length = 227
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 7 IFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKREFDHN 64
+FG+T+ P T E I +LR+T +ML K+Q+FL++K + A+ K K+ H+
Sbjct: 3 LFGRTKS-APNTQETIARLRQTIEMLEKRQKFLQEKADRKEEEAKMFVAKKKKRVYHD 59
>gi|115468882|ref|NP_001058040.1| Os06g0608500 [Oryza sativa Japonica Group]
gi|51090358|dbj|BAD35619.1| SNF7 protein-like [Oryza sativa Japonica Group]
gi|113596080|dbj|BAF19954.1| Os06g0608500 [Oryza sativa Japonica Group]
gi|125556019|gb|EAZ01625.1| hypothetical protein OsI_23660 [Oryza sativa Indica Group]
gi|125597820|gb|EAZ37600.1| hypothetical protein OsJ_21933 [Oryza sativa Japonica Group]
gi|215697892|dbj|BAG92085.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765621|dbj|BAG87318.1| unnamed protein product [Oryza sativa Japonica Group]
gi|225216863|gb|ACN85161.1| charged multivesicular body protein 4b [Oryza nivara]
Length = 220
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 3 FFKNIFGKTEEKGPTTGEA-IQKLRETEDMLIKKQEFLEKKIGEEINIART-NGTKNKR 59
F +FGK++ + T A I KL ET +ML KK+ L KK E+ A+T KNKR
Sbjct: 4 VFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKR 62
>gi|297286379|ref|XP_001101914.2| PREDICTED: charged multivesicular body protein 4b-like, partial
[Macaca mulatta]
Length = 210
Score = 34.3 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 12 EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIAR 51
E KGP EAIQ+L++TE+M +K EFL KI +E+ +A+
Sbjct: 8 ERKGPDPQEAIQQLQDTEEMGSQKPEFL-VKIEQELTVAK 46
>gi|186681444|ref|YP_001864640.1| hypothetical protein Npun_F0966 [Nostoc punctiforme PCC 73102]
gi|186463896|gb|ACC79697.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
Length = 1211
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 14 KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKRE 60
+G EA +KL+E + LI +QEF+E+ I E + + + KRE
Sbjct: 457 RGAALAEAEEKLKERPEDLIDEQEFIEQSIKEGNRLKQVEAARRKRE 503
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.131 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 995,276,294
Number of Sequences: 23463169
Number of extensions: 31813352
Number of successful extensions: 97346
Number of sequences better than 100.0: 336
Number of HSP's better than 100.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 97051
Number of HSP's gapped (non-prelim): 337
length of query: 65
length of database: 8,064,228,071
effective HSP length: 37
effective length of query: 28
effective length of database: 7,196,090,818
effective search space: 201490542904
effective search space used: 201490542904
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 69 (31.2 bits)