Your job contains 1 sequence.
>psy13000
MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKRE
FDHNK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13000
(65 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086656 - symbol:shrb "shrub" species:7227 "Drosop... 213 2.0e-17 1
ZFIN|ZDB-GENE-040426-2812 - symbol:chmp4b "chromatin modi... 182 3.8e-14 1
UNIPROTKB|F1S4Z2 - symbol:CHMP4B "Uncharacterized protein... 179 7.9e-14 1
UNIPROTKB|A2VDY3 - symbol:CHMP4A "Charged multivesicular ... 177 1.3e-13 1
UNIPROTKB|E9PQI5 - symbol:CHMP4A "Charged multivesicular ... 177 1.3e-13 1
UNIPROTKB|H0YI46 - symbol:CHMP4A "Charged multivesicular ... 177 1.3e-13 1
UNIPROTKB|Q14D22 - symbol:CHMP4A "Charged multivesicular ... 177 1.3e-13 1
UNIPROTKB|Q9BY43 - symbol:CHMP4A "Charged multivesicular ... 177 1.3e-13 1
UNIPROTKB|E2RCT8 - symbol:TM9SF1 "Uncharacterized protein... 173 3.4e-13 1
UNIPROTKB|H0YI89 - symbol:CHMP4A "Charged multivesicular ... 173 3.4e-13 1
UNIPROTKB|Q08E32 - symbol:CHMP4B "CHMP4B protein" species... 171 5.6e-13 1
UNIPROTKB|Q9H444 - symbol:CHMP4B "Charged multivesicular ... 171 5.6e-13 1
MGI|MGI:1922858 - symbol:Chmp4b "charged multivesicular b... 171 5.6e-13 1
UNIPROTKB|E9PQ80 - symbol:CHMP4A "Charged multivesicular ... 168 1.2e-12 1
UNIPROTKB|Q5ZHP5 - symbol:CHMP4B "Charged multivesicular ... 166 1.9e-12 1
UNIPROTKB|E9PSI1 - symbol:TM9SF1 "Transmembrane 9 superfa... 177 2.2e-12 1
UNIPROTKB|F1SGN5 - symbol:TM9SF1 "Uncharacterized protein... 177 2.2e-12 1
ZFIN|ZDB-GENE-040426-906 - symbol:zgc:56112 "zgc:56112" s... 165 2.4e-12 1
RGD|1309846 - symbol:Chmp4b "charged multivesicular body ... 164 3.1e-12 1
RGD|1583604 - symbol:Chmp4bl1 "chromatin modifying protei... 164 3.1e-12 1
UNIPROTKB|E2RDX2 - symbol:CHMP4B "Uncharacterized protein... 162 5.0e-12 1
UNIPROTKB|F1PAK4 - symbol:TM9SF1 "Uncharacterized protein... 173 6.0e-12 1
WB|WBGene00016961 - symbol:vps-32.1 species:6239 "Caenorh... 159 1.0e-11 1
UNIPROTKB|E1C252 - symbol:CHMP4C "Uncharacterized protein... 150 9.4e-11 1
ZFIN|ZDB-GENE-050417-389 - symbol:chmp4c "chromatin modif... 147 2.3e-10 1
WB|WBGene00016497 - symbol:vps-32.2 species:6239 "Caenorh... 142 6.6e-10 1
UNIPROTKB|Q2HJ35 - symbol:CHMP4C "Chromatin modifying pro... 138 2.5e-09 1
MGI|MGI:1913621 - symbol:Chmp4c "charged multivesicular b... 135 5.4e-09 1
UNIPROTKB|Q96CF2 - symbol:CHMP4C "Charged multivesicular ... 134 7.1e-09 1
RGD|1564543 - symbol:Chmp4c "charged multivesicular body ... 126 6.0e-08 1
UNIPROTKB|E2R7B4 - symbol:CHMP4C "Uncharacterized protein... 125 8.3e-08 1
WB|WBGene00020025 - symbol:R12C12.5 species:6239 "Caenorh... 105 1.5e-05 1
POMBASE|SPAC1142.07c - symbol:vps32 "ESCRT III complex su... 100 4.8e-05 1
>FB|FBgn0086656 [details] [associations]
symbol:shrb "shrub" species:7227 "Drosophila melanogaster"
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0044130 "negative regulation
of growth of symbiont in host" evidence=IMP] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] InterPro:IPR005024
Pfam:PF03357 EMBL:AE013599 GO:GO:0015031 GO:GO:0048813
GO:GO:0044130 eggNOG:NOG291419 GeneTree:ENSGT00390000005006
KO:K12194 OMA:MKELEAW EMBL:AY069131 RefSeq:NP_610462.3
UniGene:Dm.2267 SMR:Q8T0Q4 IntAct:Q8T0Q4 MINT:MINT-896346
STRING:Q8T0Q4 EnsemblMetazoa:FBtr0088623 GeneID:35933
KEGG:dme:Dmel_CG8055 UCSC:CG8055-RA CTD:35933 FlyBase:FBgn0086656
InParanoid:Q8T0Q4 OrthoDB:EOG4SBCFD ChiTaRS:shrb GenomeRNAi:35933
NextBio:795919 Uniprot:Q8T0Q4
Length = 226
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MSFF +FG +E PTTGEAIQKLRETE+MLIKKQEFLE KI +E+NIAR N +KNKR
Sbjct: 1 MSFFGKMFGGKKEVAPTTGEAIQKLRETENMLIKKQEFLEAKIEDELNIARKNASKNKR 59
>ZFIN|ZDB-GENE-040426-2812 [details] [associations]
symbol:chmp4b "chromatin modifying protein 4B"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 ZFIN:ZDB-GENE-040426-2812
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
KO:K12194 CTD:128866 HOGENOM:HOG000209960 EMBL:BC044191
EMBL:BC071537 IPI:IPI00504193 RefSeq:NP_998622.1 UniGene:Dr.16859
ProteinModelPortal:Q6IQ73 STRING:Q6IQ73 PRIDE:Q6IQ73
Ensembl:ENSDART00000015193 GeneID:406766 KEGG:dre:406766
InParanoid:Q6IQ73 OMA:TISTIEF NextBio:20818281 ArrayExpress:Q6IQ73
Bgee:Q6IQ73 Uniprot:Q6IQ73
Length = 224
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 40/61 (65%), Positives = 46/61 (75%)
Query: 1 MSFFKNIFGKTEE--KGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS F +FG + KGPT EAIQKLRETE+ML KKQ+FLEKKI E+ IA+ NGTKNK
Sbjct: 1 MSVFGKLFGGGGKGGKGPTPQEAIQKLRETEEMLAKKQDFLEKKIDAELLIAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>UNIPROTKB|F1S4Z2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW
EMBL:AEMK01197293 EMBL:CU407167 RefSeq:XP_003134450.3
Ensembl:ENSSSCT00000007957 GeneID:100516767 KEGG:ssc:100516767
Uniprot:F1S4Z2
Length = 224
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K E GPT EAIQ+LR+TEDML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGEGGPTPQEAIQRLRDTEDMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>UNIPROTKB|A2VDY3 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0031902 GO:GO:0015031 GO:GO:0008289
GO:GO:0030659 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
EMBL:BC133471 IPI:IPI00702618 RefSeq:NP_001121976.1
UniGene:Bt.21492 ProteinModelPortal:A2VDY3 STRING:A2VDY3
PRIDE:A2VDY3 Ensembl:ENSBTAT00000008352 GeneID:613647
KEGG:bta:613647 CTD:29082 GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 InParanoid:A2VDY3 KO:K12194 OMA:GKAGPCV
NextBio:20898686 Uniprot:A2VDY3
Length = 222
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIEQELQAAKKHGTKNKR 60
>UNIPROTKB|E9PQI5 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AL096870 EMBL:AL136295 HGNC:HGNC:20274 ChiTaRS:CHMP4A
IPI:IPI00978991 ProteinModelPortal:E9PQI5 SMR:E9PQI5
Ensembl:ENST00000533523 ArrayExpress:E9PQI5 Bgee:E9PQI5
Uniprot:E9PQI5
Length = 166
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 44 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 103
>UNIPROTKB|H0YI46 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AL096870 EMBL:AL136295 HGNC:HGNC:20274 ChiTaRS:CHMP4A
Ensembl:ENST00000548308 Uniprot:H0YI46
Length = 205
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 21 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 80
>UNIPROTKB|Q14D22 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
HOVERGEN:HBG050928 CTD:29082 HOGENOM:HOG000209959 KO:K12194
OMA:GKAGPCV EMBL:AL096870 EMBL:AL136295 IPI:IPI00794397
RefSeq:NP_054888.2 UniGene:Hs.279761 DNASU:29082 GeneID:29082
KEGG:hsa:29082 HGNC:HGNC:20274 PharmGKB:PA134888743 ChiTaRS:CHMP4A
GenomeRNAi:29082 NextBio:52058 EMBL:BC113533 EMBL:BC113535
SMR:Q14D22 STRING:Q14D22 Ensembl:ENST00000347519 UCSC:uc001wni.3
H-InvDB:HIX0131228 Uniprot:Q14D22
Length = 265
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 44 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 103
>UNIPROTKB|Q9BY43 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0008289 GO:GO:0030659 GO:GO:0016044 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS CTD:29082 KO:K12194
EMBL:AB100262 EMBL:AY329084 EMBL:AF212243 EMBL:AF161483
EMBL:BX161512 EMBL:AL096870 EMBL:AL136295 EMBL:BC010893
EMBL:BC107699 IPI:IPI00794397 RefSeq:NP_054888.2 UniGene:Hs.279761
PDB:3C3O PDBsum:3C3O ProteinModelPortal:Q9BY43 SMR:Q9BY43
DIP:DIP-39082N IntAct:Q9BY43 MINT:MINT-3063754 STRING:Q9BY43
PhosphoSite:Q9BY43 DMDM:90152096 PaxDb:Q9BY43 PRIDE:Q9BY43
DNASU:29082 GeneID:29082 KEGG:hsa:29082 GeneCards:GC14M024678
HGNC:HGNC:20274 MIM:610051 neXtProt:NX_Q9BY43 PharmGKB:PA134888743
InParanoid:Q9BY43 ChiTaRS:CHMP4A EvolutionaryTrace:Q9BY43
GenomeRNAi:29082 NextBio:52058 ArrayExpress:Q9BY43 Bgee:Q9BY43
CleanEx:HS_CHMP4A Genevestigator:Q9BY43 GermOnline:ENSG00000100931
Uniprot:Q9BY43
Length = 222
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>UNIPROTKB|E2RCT8 [details] [associations]
symbol:TM9SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00530000062897 EMBL:AAEX03005616
Ensembl:ENSCAFT00000037401 Uniprot:E2RCT8
Length = 264
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ +A+ +G KNKR
Sbjct: 44 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKHGIKNKR 103
>UNIPROTKB|H0YI89 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AL096870 EMBL:AL136295 HGNC:HGNC:20274 ChiTaRS:CHMP4A
Ensembl:ENST00000534106 Uniprot:H0YI89
Length = 61
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 36/54 (66%), Positives = 44/54 (81%)
Query: 7 IFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 5 LFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 58
>UNIPROTKB|Q08E32 [details] [associations]
symbol:CHMP4B "CHMP4B protein" species:9913 "Bos taurus"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 CTD:128866 OMA:MKELEAW EMBL:DAAA02036490
EMBL:DAAA02036491 EMBL:DAAA02036492 EMBL:BC123447 IPI:IPI00688280
RefSeq:NP_001121978.1 UniGene:Bt.3621 STRING:Q08E32
Ensembl:ENSBTAT00000017812 GeneID:616164 KEGG:bta:616164
InParanoid:Q08E32 NextBio:20899993 Uniprot:Q08E32
Length = 224
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + GPT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>UNIPROTKB|Q9H444 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0016197 "endosomal transport" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357 GO:GO:0005829
EMBL:CH471077 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0016044 PDB:3UM3 PDBsum:3UM3 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS GermOnline:ENSG00000101421 KO:K12194 CTD:128866
OMA:MKELEAW HOGENOM:HOG000209960 EMBL:AB100261 EMBL:AY329085
EMBL:AL050349 EMBL:BC033859 IPI:IPI00025974 RefSeq:NP_789782.1
UniGene:Hs.472471 PDB:3C3Q PDB:4ABM PDBsum:3C3Q PDBsum:4ABM
ProteinModelPortal:Q9H444 SMR:Q9H444 DIP:DIP-29924N IntAct:Q9H444
MINT:MINT-5000054 STRING:Q9H444 PhosphoSite:Q9H444 DMDM:24636296
PeptideAtlas:Q9H444 PRIDE:Q9H444 Ensembl:ENST00000217402
GeneID:128866 KEGG:hsa:128866 UCSC:uc002xaa.3 GeneCards:GC20P032399
HGNC:HGNC:16171 HPA:HPA041401 MIM:605387 MIM:610897
neXtProt:NX_Q9H444 Orphanet:98993 PharmGKB:PA25721
InParanoid:Q9H444 PhylomeDB:Q9H444 ChiTaRS:CHMP4B
EvolutionaryTrace:Q9H444 GenomeRNAi:128866 NextBio:82502
ArrayExpress:Q9H444 Bgee:Q9H444 CleanEx:HS_CHMP4B
Genevestigator:Q9H444 Uniprot:Q9H444
Length = 224
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + GPT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>MGI|MGI:1922858 [details] [associations]
symbol:Chmp4b "charged multivesicular body protein 4B"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1922858 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
HOGENOM:HOG000209960 ChiTaRS:CHMP4B EMBL:AK008205 EMBL:AK156473
EMBL:AK159193 EMBL:AL929557 EMBL:BC006905 EMBL:BC011429
EMBL:BC059279 IPI:IPI00171974 RefSeq:NP_083638.1 UniGene:Mm.262480
ProteinModelPortal:Q9D8B3 SMR:Q9D8B3 STRING:Q9D8B3
PhosphoSite:Q9D8B3 PaxDb:Q9D8B3 PRIDE:Q9D8B3
Ensembl:ENSMUST00000044277 GeneID:75608 KEGG:mmu:75608
UCSC:uc008njp.1 InParanoid:A2AVM1 NextBio:343498 Bgee:Q9D8B3
CleanEx:MM_CHMP4B Genevestigator:Q9D8B3
GermOnline:ENSMUSG00000038467 Uniprot:Q9D8B3
Length = 224
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + GPT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>UNIPROTKB|E9PQ80 [details] [associations]
symbol:CHMP4A "Charged multivesicular body protein 4a"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
EMBL:AL096870 EMBL:AL136295 HGNC:HGNC:20274 ChiTaRS:CHMP4A
IPI:IPI00975824 ProteinModelPortal:E9PQ80 Ensembl:ENST00000533011
ArrayExpress:E9PQ80 Bgee:E9PQ80 Uniprot:E9PQ80
Length = 213
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 5 KNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
K GK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 17 KKKLGK-KEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 70
>UNIPROTKB|Q5ZHP5 [details] [associations]
symbol:CHMP4B "Charged multivesicular body protein 4b"
species:9031 "Gallus gallus" [GO:0015031 "protein transport"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 KO:K12194 EMBL:AJ721089 IPI:IPI00582041
RefSeq:NP_001006286.1 UniGene:Gga.1495 ProteinModelPortal:Q5ZHP5
IntAct:Q5ZHP5 STRING:Q5ZHP5 PRIDE:Q5ZHP5 Ensembl:ENSGALT00000003268
GeneID:419150 KEGG:gga:419150 CTD:128866 InParanoid:Q5ZHP5
OMA:MKELEAW NextBio:20822253 Uniprot:Q5ZHP5
Length = 227
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 9 GKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GK KGP+ EAIQ+LR+TE+ML KKQEFLEKKI +E+ AR +GTKNKR
Sbjct: 15 GKGAGKGPSPQEAIQRLRDTEEMLSKKQEFLEKKIEQELAAARKHGTKNKR 65
>UNIPROTKB|E9PSI1 [details] [associations]
symbol:TM9SF1 "Transmembrane 9 superfamily member 1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR004240 InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357
GO:GO:0016021 GO:GO:0015031 EMBL:AL096870 PANTHER:PTHR10766
HGNC:HGNC:11864 ChiTaRS:TM9SF1 OMA:WYKSTVI IPI:IPI00983078
SMR:E9PSI1 Ensembl:ENST00000530611 Ensembl:ENST00000556387
UCSC:uc010tob.1 Uniprot:E9PSI1
Length = 815
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FGK +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ GTKNKR
Sbjct: 1 MSGLGRLFGKGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKYGTKNKR 60
>UNIPROTKB|F1SGN5 [details] [associations]
symbol:TM9SF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR004240
InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357 GO:GO:0016021
GO:GO:0015031 EMBL:CT961055 PANTHER:PTHR10766
GeneTree:ENSGT00530000062897 OMA:WYKSTVI EMBL:CU019590
Ensembl:ENSSSCT00000002237 Uniprot:F1SGN5
Length = 819
Score = 177 (67.4 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ A+ +GTKNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQTAKKHGTKNKR 60
>ZFIN|ZDB-GENE-040426-906 [details] [associations]
symbol:zgc:56112 "zgc:56112" species:7955 "Danio
rerio" [GO:0015031 "protein transport" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] InterPro:IPR005024 Pfam:PF03357
ZFIN:ZDB-GENE-040426-906 GO:GO:0005829 GO:GO:0031902 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS KO:K12194
EMBL:BC045919 IPI:IPI00499940 RefSeq:NP_956489.1 UniGene:Dr.935
ProteinModelPortal:Q7ZVC4 STRING:Q7ZVC4 GeneID:393164
KEGG:dre:393164 HOGENOM:HOG000209960 NextBio:20814234
ArrayExpress:Q7ZVC4 Uniprot:Q7ZVC4
Length = 220
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 1 MSFFKNIFGKTEEKGPTTG--EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNK 58
MS F +FG + G + EAIQ+LRETE+ML KKQEFLEKKI +E+ A+ NGTKNK
Sbjct: 1 MSLFGKMFGSGGKGGKSASPQEAIQRLRETEEMLTKKQEFLEKKIEQELVTAKKNGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>RGD|1309846 [details] [associations]
symbol:Chmp4b "charged multivesicular body protein 4B"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1309846
RGD:1583604 GO:GO:0015031 EMBL:CH473959 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW IPI:IPI00199655
RefSeq:XP_002726392.1 RefSeq:XP_003749765.1
Ensembl:ENSRNOT00000052393 GeneID:679886 KEGG:rno:679886 CTD:679886
NextBio:664702 Uniprot:D4A9Z8
Length = 224
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGWGKAGKGDPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>RGD|1583604 [details] [associations]
symbol:Chmp4bl1 "chromatin modifying protein 4B-like 1"
species:10116 "Rattus norvegicus" [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR005024 Pfam:PF03357 RGD:1309846
RGD:1583604 GO:GO:0015031 EMBL:CH473959 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 KO:K12194 OMA:MKELEAW IPI:IPI00199655
RefSeq:XP_002726392.1 RefSeq:XP_003749765.1
Ensembl:ENSRNOT00000052393 GeneID:679886 KEGG:rno:679886 CTD:679886
NextBio:664702 Uniprot:D4A9Z8
Length = 224
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + PT EAIQ+LR+TE+ML KKQEFLEKKI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGWGKAGKGDPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>UNIPROTKB|E2RDX2 [details] [associations]
symbol:CHMP4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:128866 OMA:MKELEAW
EMBL:AAEX03013900 RefSeq:XP_542966.1 ProteinModelPortal:E2RDX2
Ensembl:ENSCAFT00000011977 GeneID:485842 KEGG:cfa:485842
NextBio:20859747 Uniprot:E2RDX2
Length = 224
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 1 MSFFKNIFG----KTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS F +FG K + GPT +AIQ+LR+TE+ML KKQEFLE KI +E+ A+ +GTK
Sbjct: 1 MSVFGKLFGAGGGKAGKGGPTPQDAIQRLRDTEEMLSKKQEFLETKIEQELTAAKKHGTK 60
Query: 57 NKR 59
NKR
Sbjct: 61 NKR 63
>UNIPROTKB|F1PAK4 [details] [associations]
symbol:TM9SF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR004240
InterPro:IPR005024 Pfam:PF02990 Pfam:PF03357 GO:GO:0016021
GO:GO:0015031 PANTHER:PTHR10766 GeneTree:ENSGT00530000062897
OMA:WYKSTVI EMBL:AAEX03005616 Ensembl:ENSCAFT00000019165
Uniprot:F1PAK4
Length = 820
Score = 173 (66.0 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 1 MSFFKNIFGK-TEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS +FG+ +EKGPT EAIQKL+ETE +LIKKQEFLE+KI +E+ +A+ +G KNKR
Sbjct: 1 MSGLGRLFGRGKKEKGPTPEEAIQKLKETEKILIKKQEFLEQKIQQELQMAKKHGIKNKR 60
>WB|WBGene00016961 [details] [associations]
symbol:vps-32.1 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0015031 GO:GO:0018996 GO:GO:0071688
GO:GO:0010171 GO:GO:0040011 GO:GO:0010008 EMBL:FO080968
eggNOG:NOG291419 GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 OMA:MKELEAW PIR:T15848 RefSeq:NP_495337.1
ProteinModelPortal:Q18886 SMR:Q18886 STRING:Q18886 PaxDb:Q18886
EnsemblMetazoa:C56C10.3.1 EnsemblMetazoa:C56C10.3.2 GeneID:174091
KEGG:cel:CELE_C56C10.3 UCSC:C56C10.3.1 CTD:174091 WormBase:C56C10.3
InParanoid:Q18886 NextBio:882467 Uniprot:Q18886
Length = 221
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 36/60 (60%), Positives = 44/60 (73%)
Query: 1 MSFFKNIFGKTEEKGPTTG-EAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F IFG +++ P+T E+IQKLRETE+ML KKQEFLEKK+ +E A GTKNKR
Sbjct: 1 MSLFGKIFGGRKQEAPSTPQESIQKLRETEEMLEKKQEFLEKKVIDEKQNAVKYGTKNKR 60
>UNIPROTKB|E1C252 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:92421 OMA:KFFKGGG
EMBL:AADN02024760 IPI:IPI00580681 RefSeq:NP_001186404.1
UniGene:Gga.11662 Ensembl:ENSGALT00000025459 GeneID:420201
KEGG:gga:420201 NextBio:20823150 Uniprot:E1C252
Length = 220
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 3 FFKNIFGKTEEKG---PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK G T KG P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GTKNKR
Sbjct: 7 FFKG-GGSTASKGRGGPSPQEALARLRETEEMLSKKQEYLESRIERELSLARQHGTKNKR 65
>ZFIN|ZDB-GENE-050417-389 [details] [associations]
symbol:chmp4c "chromatin modifying protein 4C"
species:7955 "Danio rerio" [GO:0015031 "protein transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR005024
Pfam:PF03357 ZFIN:ZDB-GENE-050417-389 GO:GO:0015031
eggNOG:NOG291419 HOVERGEN:HBG050928 HOGENOM:HOG000209959 KO:K12194
CTD:92421 EMBL:BC092770 IPI:IPI00506306 RefSeq:NP_001017844.1
UniGene:Dr.84820 ProteinModelPortal:Q568Q1 STRING:Q568Q1
GeneID:550542 KEGG:dre:550542 InParanoid:Q568Q1 OrthoDB:EOG4ZCT5Z
NextBio:20879783 ArrayExpress:Q568Q1 Uniprot:Q568Q1
Length = 239
Score = 147 (56.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 30/45 (66%), Positives = 36/45 (80%)
Query: 15 GPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
GP+ EAI +LRETE ML KKQE+LE +I +EI IA+ NGTKNKR
Sbjct: 37 GPSPQEAINRLRETEAMLTKKQEYLESRIEQEIVIAKKNGTKNKR 81
>WB|WBGene00016497 [details] [associations]
symbol:vps-32.2 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0032940 GO:GO:0015031 GO:GO:0018996 GO:GO:0040011
eggNOG:NOG291419 GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959
KO:K12194 EMBL:FO080808 RefSeq:NP_505022.2 UniGene:Cel.26024
ProteinModelPortal:Q22916 SMR:Q22916 STRING:Q22916
EnsemblMetazoa:C37C3.3 GeneID:183288 KEGG:cel:CELE_C37C3.3
UCSC:C37C3.3 CTD:183288 WormBase:C37C3.3 InParanoid:Q22916
OMA:QIHGEYN NextBio:920584 Uniprot:Q22916
Length = 217
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 35/61 (57%), Positives = 40/61 (65%)
Query: 1 MSFFKNIFGKTEEKGPTTG-EAIQKLRETEDMLIKKQEFLEKKIGE-EINIARTNGTKNK 58
MS F FG ++ P T E+IQKLRETED+L KKQEFLEKKI + A GTKNK
Sbjct: 1 MSLFSKFFGGMMQEAPITPQESIQKLRETEDILEKKQEFLEKKIDDVRKQNAVKYGTKNK 60
Query: 59 R 59
R
Sbjct: 61 R 61
>UNIPROTKB|Q2HJ35 [details] [associations]
symbol:CHMP4C "Chromatin modifying protein 4C" species:9913
"Bos taurus" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419
HOVERGEN:HBG050928 OrthoDB:EOG49GKHS GeneTree:ENSGT00390000005006
HOGENOM:HOG000209959 KO:K12194 CTD:92421 OMA:KFFKGGG
EMBL:DAAA02039682 EMBL:BC113331 IPI:IPI00692515
RefSeq:NP_001039441.1 UniGene:Bt.26637 STRING:Q2HJ35
Ensembl:ENSBTAT00000006291 GeneID:507572 KEGG:bta:507572
InParanoid:Q2HJ35 NextBio:20868123 Uniprot:Q2HJ35
Length = 236
Score = 138 (53.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+++AR +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSAQEALARLRETEEMLGKKQEYLEGRIQRELSLARKHGTQNKR 63
>MGI|MGI:1913621 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10090 "Mus musculus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 MGI:MGI:1913621 GO:GO:0005829 GO:GO:0031902
GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928 OrthoDB:EOG49GKHS
GeneTree:ENSGT00390000005006 HOGENOM:HOG000209959 KO:K12194
CTD:92421 OMA:KFFKGGG EMBL:AK009273 EMBL:AK010707 EMBL:AK160189
EMBL:BC115983 EMBL:BC117538 IPI:IPI00317752 RefSeq:NP_079795.1
UniGene:Mm.366147 UniGene:Mm.440046 ProteinModelPortal:Q9D7F7
SMR:Q9D7F7 STRING:Q9D7F7 PhosphoSite:Q9D7F7 PaxDb:Q9D7F7
PRIDE:Q9D7F7 Ensembl:ENSMUST00000029049 GeneID:66371 KEGG:mmu:66371
UCSC:uc008opu.1 InParanoid:Q149R2 ChiTaRS:CHMP4C NextBio:321473
Bgee:Q9D7F7 CleanEx:MM_CHMP4C Genevestigator:Q9D7F7
GermOnline:ENSMUSG00000027536 Uniprot:Q9D7F7
Length = 232
Score = 135 (52.6 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGTRSSRARAAPSAQEALARLRETEEMLAKKQEYLENRIQRELALAKKHGSQNKR 63
>UNIPROTKB|Q96CF2 [details] [associations]
symbol:CHMP4C "Charged multivesicular body protein 4c"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0016197 "endosomal transport"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR005024 Pfam:PF03357
GO:GO:0005829 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0016044 EMBL:CH471068 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS HOGENOM:HOG000209959 KO:K12194 EMBL:AB120734
EMBL:AY329086 EMBL:AK314873 EMBL:BC014321 IPI:IPI00060414
RefSeq:NP_689497.1 UniGene:Hs.183861 PDB:3C3R PDBsum:3C3R
ProteinModelPortal:Q96CF2 SMR:Q96CF2 DIP:DIP-38342N IntAct:Q96CF2
MINT:MINT-6942276 STRING:Q96CF2 PhosphoSite:Q96CF2 DMDM:73917755
PaxDb:Q96CF2 PRIDE:Q96CF2 Ensembl:ENST00000297265 GeneID:92421
KEGG:hsa:92421 UCSC:uc003ycl.3 CTD:92421 GeneCards:GC08P082644
HGNC:HGNC:30599 HPA:HPA023799 MIM:610899 neXtProt:NX_Q96CF2
PharmGKB:PA142672113 InParanoid:Q96CF2 OMA:KFFKGGG
EvolutionaryTrace:Q96CF2 GenomeRNAi:92421 NextBio:77760 Bgee:Q96CF2
CleanEx:HS_CHMP4C Genevestigator:Q96CF2 GermOnline:ENSG00000164695
Uniprot:Q96CF2
Length = 233
Score = 134 (52.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRETE+ML KKQE+LE +I EI +A+ +GT+NKR
Sbjct: 7 FFKGGGSSKSRAAPSPQEALVRLRETEEMLGKKQEYLENRIQREIALAKKHGTQNKR 63
>RGD|1564543 [details] [associations]
symbol:Chmp4c "charged multivesicular body protein 4C"
species:10116 "Rattus norvegicus" [GO:0005829 "cytosol"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 RGD:1564543 GO:GO:0005829
GO:GO:0031902 GO:GO:0015031 eggNOG:NOG291419 HOVERGEN:HBG050928
OrthoDB:EOG49GKHS HOGENOM:HOG000209959 KO:K12194 CTD:92421
EMBL:BC092576 IPI:IPI00209669 RefSeq:NP_001017466.2
UniGene:Rn.162567 ProteinModelPortal:Q569C1 STRING:Q569C1
PRIDE:Q569C1 GeneID:361916 KEGG:rno:361916 UCSC:RGD:1564543
InParanoid:Q569C1 NextBio:678036 ArrayExpress:Q569C1
Genevestigator:Q569C1 GermOnline:ENSRNOG00000010238 Uniprot:Q569C1
Length = 232
Score = 126 (49.4 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 3 FFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
FFK P+ EA+ +LRE E+M+ KKQE+LE +I E+ +A+ +G++NKR
Sbjct: 7 FFKGSRSSRARAAPSAQEALARLREIEEMMAKKQEYLENRIQRELALAKKHGSQNKR 63
>UNIPROTKB|E2R7B4 [details] [associations]
symbol:CHMP4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR005024 Pfam:PF03357 GO:GO:0015031
GeneTree:ENSGT00390000005006 KO:K12194 CTD:92421 OMA:KFFKGGG
EMBL:AAEX03015910 RefSeq:XP_535115.1 Ensembl:ENSCAFT00000013501
GeneID:477926 KEGG:cfa:477926 NextBio:20853327 Uniprot:E2R7B4
Length = 236
Score = 125 (49.1 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 1 MSFFKNIFGK-TEEKG---PTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTK 56
MS FG KG P+ EA+ +LRETE+ML KKQE+LE ++ E+ +A+ +GT+
Sbjct: 1 MSKLGKFFGAGRSSKGRAAPSPQEALARLRETEEMLSKKQEYLEARVQRELTLAKKHGTR 60
Query: 57 NKR 59
N R
Sbjct: 61 NPR 63
>WB|WBGene00020025 [details] [associations]
symbol:R12C12.5 species:6239 "Caenorhabditis elegans"
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR005024
Pfam:PF03357 GO:GO:0015031 eggNOG:NOG291419
GeneTree:ENSGT00390000005006 KO:K12194 HOGENOM:HOG000209960
EMBL:FO081545 PIR:T16731 RefSeq:NP_495206.2
ProteinModelPortal:Q21959 SMR:Q21959 STRING:Q21959 PaxDb:Q21959
EnsemblMetazoa:R12C12.5 GeneID:174010 KEGG:cel:CELE_R12C12.5
UCSC:R12C12.5 CTD:174010 WormBase:R12C12.5 InParanoid:Q21959
OMA:INDNMEN NextBio:882111 Uniprot:Q21959
Length = 236
Score = 105 (42.0 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 12 EEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
+ K PT EAI LR+ E++LIKKQE+ E +I +E+ A+ NK+
Sbjct: 30 KRKAPTADEAIGNLRDAEELLIKKQEYFELRIEQEVESAKKYMKTNKK 77
>POMBASE|SPAC1142.07c [details] [associations]
symbol:vps32 "ESCRT III complex subunit Vps32"
species:4896 "Schizosaccharomyces pombe" [GO:0000815 "ESCRT III
complex" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006900
"membrane budding" evidence=IC] [GO:0043328 "protein targeting to
vacuole involved in ubiquitin-dependent protein catabolic process
via the multivesicular body sorting pathway" evidence=IMP]
[GO:0045324 "late endosome to vacuole transport" evidence=IMP]
InterPro:IPR005024 Pfam:PF03357 PomBase:SPAC1142.07c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0000815 GO:GO:0043328
eggNOG:NOG291419 KO:K12194 OMA:MKELEAW HOGENOM:HOG000209960
GO:GO:0006900 OrthoDB:EOG4TMVBN RefSeq:NP_594271.1
ProteinModelPortal:Q9P7F7 MINT:MINT-468312 STRING:Q9P7F7
EnsemblFungi:SPAC1142.07c.1 GeneID:2542922 KEGG:spo:SPAC1142.07c
NextBio:20803958 Uniprot:Q9P7F7
Length = 222
Score = 100 (40.3 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 1 MSFFKNIFGKTEEKGPTTGEAIQKLRETEDMLIKKQEFLEKKIGEEINIARTNGTKNKR 59
MS F FG K TT + I + +E + KK+E LE++I E+ IAR N T NKR
Sbjct: 1 MSGFLRWFGGNRSKD-TTKDTIVRFQEMLALYDKKEEVLERQIAEQTEIARKNATTNKR 58
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.131 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 65 65 0.00091 102 3 11 23 0.49 28
29 0.46 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 415 (44 KB)
Total size of DFA: 72 KB (2062 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.45u 0.12s 11.57t Elapsed: 00:00:01
Total cpu time: 11.45u 0.12s 11.57t Elapsed: 00:00:01
Start: Thu Aug 15 12:14:31 2013 End: Thu Aug 15 12:14:32 2013