BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13005
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R946|PIGP_PONAB Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Pongo abelii GN=PIGP PE=2 SV=1
Length = 134
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
Query: 1 MVESTPSPTPSRANNGFVLYLASTIMFVVYLIWAFIPDSILYYFGLTYLPQKYWAIAVPI 60
MVE++PSP P RA GFVL+L+S F++YL+WAFIP+S L GLTY PQKYWA+A+P+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 60
Query: 61 YGMVLLFV-FVMFFYPCINMSLTPVRDSPNVMIDSFSLSDK-KETVPGGIPSACDIPIST 118
Y ++ + + +V+ F INM T DS + + D+++ + + K+ IP+ DI IS
Sbjct: 61 YLLIAIVIGYVLLF--GINMMSTSPLDSIHTITDNYARNQRQKKYQEEAIPALRDISISE 118
Query: 119 VCEMLYLKNKKL 130
V +M +L K+L
Sbjct: 119 VNQMFFLAAKEL 130
>sp|Q9JHG1|PIGP_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Mus musculus GN=Pigp PE=2 SV=1
Length = 132
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Query: 1 MVESTPSPTPSRANNGFVLYLASTIMFVVYLIWAFIPDSILYYFGLTYLPQKYWAIAVPI 60
MVE++PSP P RA GFVL+L+S F++YL+WAF+P+S L GLTY PQKYWA+A+P+
Sbjct: 1 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFVPESWLNSLGLTYWPQKYWAVALPV 60
Query: 61 YGMVLLFV-FVMFFYPCINMSLTPVRDSPNVMIDSFSLSDKKET-VPGGIPSACDIPIST 118
Y ++ + + +V+ F INM T DS + + D+++ + +++ IP+ D+PIS
Sbjct: 61 YLLITVVIGYVLLF--GINMMSTSPLDSIHTITDNYAKNQQRKNYQEDAIPALRDVPISE 118
Query: 119 VCEMLYLKNKKL 130
V +M +L K+L
Sbjct: 119 VNKMFFLGAKEL 130
>sp|P57054|PIGP_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Homo sapiens GN=PIGP PE=1 SV=3
Length = 158
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
Query: 1 MVESTPSPTPSRANNGFVLYLASTIMFVVYLIWAFIPDSILYYFGLTYLPQKYWAIAVPI 60
MVE++PSP P RA GFVL+L+S F++YL+WAFIP+S L GLTY PQKYWA+A+P+
Sbjct: 25 MVENSPSPLPERAIYGFVLFLSSQFGFILYLVWAFIPESWLNSLGLTYWPQKYWAVALPV 84
Query: 61 YGMVLLFV-FVMFFYPCINMSLTPVRDSPNVMIDSFSLS-DKKETVPGGIPSACDIPIST 118
Y ++ + + +V+ F INM T DS + + D+++ + +K+ IP+ DI IS
Sbjct: 85 YLLIAIVIGYVLLF--GINMMSTSPLDSIHTITDNYAKNQQQKKYQEEAIPALRDISISE 142
Query: 119 VCEMLYLKNKKL 130
V +M +L K+L
Sbjct: 143 VNQMFFLAAKEL 154
>sp|O64792|PIGP_ARATH Phosphatidylinositol N-acetylglucosaminyltransferase subunit P
OS=Arabidopsis thaliana GN=At1g61280 PE=2 SV=1
Length = 137
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 7/115 (6%)
Query: 16 GFVLYLASTIMFVVYLIWAFIPDSILYYFGLTYLPQKYWAIAVPIYGMVLLFVFVMFFYP 75
GFV ++ + V++LIW ++PD L G+ Y P KYWA+A+P+Y MV L V + FY
Sbjct: 18 GFVGSISIVVATVIFLIWGYVPDKFLESIGIYYYPSKYWAMAMPMYSMVTLLV-ALVFYI 76
Query: 76 CINMSLTPVRDSPNVMIDSFSLSD------KKETVPGGIPSACDIPISTVCEMLY 124
+N T S N + D +S D K I DI I+ + ++++
Sbjct: 77 GLNFMSTSKPTSLNTLFDDYSREDVNFLPLMKNGEDRPIDPISDIDITRINDLMF 131
>sp|O13904|MUG84_SCHPO Meiotically up-regulated gene 84 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug84 PE=1 SV=3
Length = 195
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 10 PSRANNGFVLYLASTIMFVVYLIWAFIPDSILYYFGLTYLPQKYWAIAVPIYGMVLLFVF 69
P+ GFV+YL S + F VY++WA P +L +F + Y ++WA+A+P + LFV
Sbjct: 80 PTYEYYGFVMYLVSMLGFGVYIVWALTPAPVLKFFEIHYYLSRWWALAIPTW----LFVL 135
Query: 70 VMFFYPCINMSLTPVRDSP----NVMIDSFSLSDKKETVPGG 107
V++ + +N T V P ++D ++L +++ G
Sbjct: 136 VIYIHVVLNAYNTEVLTKPFSSLECIVDQYALVGEEDGAAHG 177
>sp|A5GSD0|ARGB_SYNR3 Acetylglutamate kinase OS=Synechococcus sp. (strain RCC307) GN=argB
PE=3 SV=1
Length = 296
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 85 RDSPNVMIDSFSLSDKKETVPGGIPSACDIPISTVC 120
RD P +ID SLS+ +E + G+ + +P + C
Sbjct: 218 RDDPESLIDQLSLSEARELIHAGVVAGGMVPKTECC 253
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,486,522
Number of Sequences: 539616
Number of extensions: 1822572
Number of successful extensions: 5515
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 5506
Number of HSP's gapped (non-prelim): 28
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)