Query psy13007
Match_columns 128
No_of_seqs 133 out of 1206
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 16:58:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13007.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13007hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 1.1E-23 3.7E-28 156.8 11.2 110 19-128 30-143 (510)
2 3uon_A Human M2 muscarinic ace 99.9 1E-23 3.6E-28 153.9 9.8 127 1-128 1-129 (467)
3 2rh1_A Beta-2-adrenergic recep 99.9 1.6E-23 5.6E-28 155.3 10.7 110 18-128 37-146 (500)
4 2ks9_A Substance-P receptor; w 99.9 5.8E-23 2E-27 146.1 13.0 107 21-128 32-138 (364)
5 2lnl_A C-X-C chemokine recepto 99.9 3.2E-23 1.1E-27 144.1 10.8 106 20-128 10-115 (296)
6 1u19_A Rhodopsin; G protein-co 99.9 9.9E-23 3.4E-27 143.8 13.0 110 18-128 35-144 (349)
7 3odu_A C-X-C chemokine recepto 99.9 2.8E-22 9.7E-27 147.6 12.0 108 18-128 45-152 (502)
8 4dkl_A MU-type opioid receptor 99.9 2.2E-22 7.6E-27 146.7 10.1 109 18-128 14-122 (464)
9 3vw7_A Proteinase-activated re 99.9 6.3E-23 2.2E-27 150.5 7.0 112 16-128 15-126 (484)
10 3pbl_A D(3) dopamine receptor, 99.9 7.5E-23 2.6E-27 150.0 7.2 109 20-128 37-145 (481)
11 4eiy_A Adenosine receptor A2A/ 99.9 3.3E-22 1.1E-26 145.3 8.7 110 16-128 26-135 (447)
12 4ea3_A Fusion protein of nocic 99.9 1.1E-21 3.8E-26 143.1 10.9 110 17-128 121-230 (434)
13 3rze_A Histamine H1 receptor, 99.9 3.3E-22 1.1E-26 145.5 8.1 106 22-128 9-114 (452)
14 3eml_A Human adenosine A2A rec 99.9 4.3E-22 1.5E-26 146.0 8.3 109 17-128 17-125 (488)
15 4amj_A Beta-1 adrenergic recep 99.9 2.4E-22 8.2E-27 139.8 6.3 109 19-128 9-117 (315)
16 3v2y_A Sphingosine 1-phosphate 99.9 2.5E-21 8.5E-26 144.3 10.3 104 22-128 64-167 (520)
17 2z73_A Rhodopsin; visual pigme 99.9 3.1E-21 1.1E-25 140.9 10.4 108 20-128 33-141 (448)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 1.3E-21 4.3E-26 145.5 7.9 111 17-128 178-288 (514)
19 1hll_A Alpha-2A adrenergic rec 98.5 3.4E-08 1.2E-12 46.2 0.9 21 108-128 2-22 (32)
20 2lot_A Apelin receptor; membra 96.2 0.00011 3.7E-09 39.7 -3.5 29 23-51 30-58 (64)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.90 E-value=1.1e-23 Score=156.82 Aligned_cols=110 Identities=38% Similarity=0.673 Sum_probs=95.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCC---chHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-hCccccchhh
Q psy13007 19 YVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMH---TATNYYLFSLAVSDLLMLFWGIPSEIIYIWH-KYPYMFDETI 94 (128)
Q Consensus 19 ~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~---~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~-~~~~~~~~~~ 94 (128)
.......++|.++.++|++||+++++++.++|++| +++|+++.|||++|++.+++.+|..+..... ...|.+|+..
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~ 109 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAG 109 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHH
Confidence 34567778899999999999999999988876554 6899999999999999999999988877653 4569999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 95 CIMVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 95 C~~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
|++..++...+..+|++++++||+|||+||++|+
T Consensus 110 C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~ 143 (510)
T 4grv_A 110 CRGYYFLRDACTYATALNVASLSVARYLAICHPF 143 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccc
Confidence 9999999999999999999999999999999996
No 2
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.90 E-value=1e-23 Score=153.94 Aligned_cols=127 Identities=22% Similarity=0.369 Sum_probs=101.2
Q ss_pred CCCCcCCCCCcC--CCCCcchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHH
Q psy13007 1 MNDSQYEDLAWG--PQHDPLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSE 78 (128)
Q Consensus 1 mn~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~ 78 (128)
||+++....... .............+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..
T Consensus 1 M~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~ 80 (467)
T 3uon_A 1 MDDSTDSSDNSLALTSPYKTFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLY 80 (467)
T ss_dssp -------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred CCCCCCCCcccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655433222 222233445667788999999999999999999999999999999999999999999999899988
Q ss_pred HHHHHhhCccccchhhHHhhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 79 IIYIWHKYPYMFDETICIMVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 79 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+.....+ .|.+++..|++..++..++..+|++++++||+|||+||++|+
T Consensus 81 ~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~ 129 (467)
T 3uon_A 81 TLYTVIG-YWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPL 129 (467)
T ss_dssp HHHHHSS-SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHhcC-CccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 8877765 499999999999999999999999999999999999999996
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.90 E-value=1.6e-23 Score=155.29 Aligned_cols=110 Identities=27% Similarity=0.439 Sum_probs=100.6
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHh
Q psy13007 18 LYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIM 97 (128)
Q Consensus 18 ~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 97 (128)
........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++..+|..+.....+ .|.+++..|++
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~-~w~~~~~~C~~ 115 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMK-MWTFGNFWCEF 115 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT-SCCSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcCCcchhhH
Confidence 34456677889999999999999999999999999999999999999999999998999888877665 49999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 98 VSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 98 ~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++..++..+|++++++||+|||+||++|+
T Consensus 116 ~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl 146 (500)
T 2rh1_A 116 WTSIDVLCVTASIETLCVIAVDRYFAITSPF 146 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeeccC
Confidence 9999999999999999999999999999996
No 4
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.90 E-value=5.8e-23 Score=146.11 Aligned_cols=107 Identities=29% Similarity=0.522 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhhhH
Q psy13007 21 IFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMVSF 100 (128)
Q Consensus 21 ~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ 100 (128)
.....+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++...|..+.....+ +|.+++..|+...+
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~-~~~~~~~~C~~~~~ 110 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHN-EWYYGLFYCKFHNF 110 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHT-SCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccchHHHHHhHHH
Confidence 34447789999999999999999999999999999999999999999999988888877766654 48889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 101 LSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 101 ~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+...+..+|+++++++++|||+||++|+
T Consensus 111 ~~~~~~~~s~~~l~~isidRy~aI~~P~ 138 (364)
T 2ks9_A 111 FPIAAVFASIYSMTAVAFDRYMAIIHPL 138 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999996
No 5
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.90 E-value=3.2e-23 Score=144.14 Aligned_cols=106 Identities=26% Similarity=0.473 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhhh
Q psy13007 20 VIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMVS 99 (128)
Q Consensus 20 ~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 99 (128)
.+....++|.++.++|++||++++.++.++|++|+|+|+++.|||++|++.++ ..|....... ..|..|+..|+...
T Consensus 10 ~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~--~~~~~~~~~c~~~~ 86 (296)
T 2lnl_A 10 NKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV--NGWIFGTFLCKVVS 86 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH--SSSCCSSHHHHHHH
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc--CCCccchhHHHHHh
Confidence 35566788999999999999999999999999999999999999999999876 5666655544 34889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 100 FLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 100 ~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+....+..+|+++++++|+|||.||++|+
T Consensus 87 ~~~~~~~~~s~~~l~~isidRy~aI~~P~ 115 (296)
T 2lnl_A 87 LLKEVNFYSGILLLACISVDRYLAIVHAT 115 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSSCS
T ss_pred hhhhhhHHHHHHHHHHHHhhhhhhhhhcc
Confidence 99999999999999999999999999996
No 6
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.89 E-value=9.9e-23 Score=143.78 Aligned_cols=110 Identities=25% Similarity=0.537 Sum_probs=99.7
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHh
Q psy13007 18 LYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIM 97 (128)
Q Consensus 18 ~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 97 (128)
........+++.+++++|++||++++.++.++|++|++.|+++.|||++|++.++...|..+.....+. |.+++..|+.
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~-~~~~~~~C~~ 113 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY-FVFGPTGCNL 113 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTS-CTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCe-eeCChhHHHH
Confidence 344556677889999999999999999999999999999999999999999999988888877766554 8889999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 98 VSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 98 ~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++...+..+|+++++++++|||+||++|+
T Consensus 114 ~~~~~~~~~~~s~~~l~~isidRy~aI~~P~ 144 (349)
T 1u19_A 114 EGFFATLGGEIALWSLVVLAIERYVVVCKPM 144 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeCCc
Confidence 9999999999999999999999999999995
No 7
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.88 E-value=2.8e-22 Score=147.63 Aligned_cols=108 Identities=25% Similarity=0.429 Sum_probs=98.7
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHh
Q psy13007 18 LYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIM 97 (128)
Q Consensus 18 ~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 97 (128)
...+....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+ +..|..+..... .|.+++..|++
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~--~~~~~~~~C~~ 121 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA--NWYFGNFLCKA 121 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT--CCCSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc--CCcCCchhhhh
Confidence 445677788999999999999999999999999999999999999999999996 578888776654 48899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 98 VSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 98 ~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++..++..+|++++++||+|||+||++|+
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~ 152 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHAT 152 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 9999999999999999999999999999996
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.88 E-value=2.2e-22 Score=146.68 Aligned_cols=109 Identities=31% Similarity=0.585 Sum_probs=99.1
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHh
Q psy13007 18 LYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIM 97 (128)
Q Consensus 18 ~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 97 (128)
........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++. .|..+.....+ .|.+++..|++
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~-~~~~~~~~C~~ 91 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMG-TWPFGNILCKI 91 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS-SCCSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC-Ccccccchhhh
Confidence 34566777889999999999999999999999999999999999999999999886 88877777665 49899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 98 VSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 98 ~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++..++..+|++++++||+|||+||++|+
T Consensus 92 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 122 (464)
T 4dkl_A 92 VISIDYYNMFTSIFTLCTMSVDRYIAVCHPV 122 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999984
No 9
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.88 E-value=6.3e-23 Score=150.52 Aligned_cols=112 Identities=21% Similarity=0.392 Sum_probs=100.2
Q ss_pred CcchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhH
Q psy13007 16 DPLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETIC 95 (128)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C 95 (128)
+.........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++ ..|...........|.+++..|
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~~~~C 93 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFGSELC 93 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSCHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhHH
Confidence 445566778889999999999999999999999999999999999999999999976 4666666655555699999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 96 IMVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 96 ~~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
++..++..++..+|++++++||+|||+||++|+
T Consensus 94 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~ 126 (484)
T 3vw7_A 94 RFVTAAFYCNMYASILLMTVISIDRFLAVVYPM 126 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheEEEccc
Confidence 999999999999999999999999999999996
No 10
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.87 E-value=7.5e-23 Score=150.03 Aligned_cols=109 Identities=24% Similarity=0.399 Sum_probs=98.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhhh
Q psy13007 20 VIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMVS 99 (128)
Q Consensus 20 ~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~ 99 (128)
......+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++..+|..+........|.+++..|++..
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 116 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFV 116 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHH
Confidence 34555678899999999999999999999999999999999999999999999899988887777667999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 100 FLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 100 ~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
++..++..+|++++++|++|||+||++|+
T Consensus 117 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 145 (481)
T 3pbl_A 117 TLDVMMCTASIWNLCAISIDRYTAVVMPV 145 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999984
No 11
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.87 E-value=3.3e-22 Score=145.29 Aligned_cols=110 Identities=23% Similarity=0.397 Sum_probs=98.1
Q ss_pred CcchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhH
Q psy13007 16 DPLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETIC 95 (128)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C 95 (128)
.+........+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++..+|..+.... .|..+...|
T Consensus 26 ~~~~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~---~~~~~~~~C 102 (447)
T 4eiy_A 26 PPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST---GFCAACHGC 102 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT---TCEEEHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccCccHH
Confidence 34455667778899999999999999999999999999999999999999999999888997776432 366789999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 96 IMVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 96 ~~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
++..++..++..+|++++++||+|||+||++|+
T Consensus 103 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~ 135 (447)
T 4eiy_A 103 LFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPL 135 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeEEeccc
Confidence 999999999999999999999999999999984
No 12
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.87 E-value=1.1e-21 Score=143.10 Aligned_cols=110 Identities=34% Similarity=0.594 Sum_probs=99.1
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHH
Q psy13007 17 PLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICI 96 (128)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 96 (128)
+...+....+++.+++++|++||++++.++.+++++|+|+|+++.|||++|++. +...|..+.....+. |.+++..|+
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~-~~~~~~~C~ 198 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGF-WPFGNALCK 198 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTS-CTTHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcC-CcCcccHHH
Confidence 445667777889999999999999999999999999999999999999999998 557888877776655 888999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 97 MVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 97 ~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+..++..++..+|+++++++|+|||+||++|+
T Consensus 199 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl 230 (434)
T 4ea3_A 199 TVIAIDYYNMFTSTFTLTAMSVDRYVAICHPI 230 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhEEEccc
Confidence 99999999999999999999999999999995
No 13
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.87 E-value=3.3e-22 Score=145.50 Aligned_cols=106 Identities=21% Similarity=0.447 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhhhHH
Q psy13007 22 FPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMVSFL 101 (128)
Q Consensus 22 ~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 101 (128)
....+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.++...|..+.....+ .|.+++..|++..++
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~-~~~~~~~~C~~~~~~ 87 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMS-KWSLGRPLCLFWLSM 87 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSS-SCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCchhHhHHHHH
Confidence 4455788999999999999999999999999999999999999999999998999988887765 499999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 102 SETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 102 ~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++..+|++++++||+|||+||++|+
T Consensus 88 ~~~~~~~s~~~l~~is~dRy~aI~~P~ 114 (452)
T 3rze_A 88 DYVASTASIFSVFILCIDRYRSVQQPL 114 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeCcc
Confidence 999999999999999999999999996
No 14
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.86 E-value=4.3e-22 Score=145.96 Aligned_cols=109 Identities=23% Similarity=0.402 Sum_probs=97.4
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHH
Q psy13007 17 PLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICI 96 (128)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 96 (128)
+........+++.+++++|++||+++++++.+++++|+++++++.|||++|++.++..+|..+.... .|.++...|+
T Consensus 17 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~---~~~~~~~~C~ 93 (488)
T 3eml_A 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST---GFCAACHGCL 93 (488)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT---CCEECHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccccchHHH
Confidence 3344566778899999999999999999999999999999999999999999999988998776543 4778999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 97 MVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 97 ~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+..++..++..+|++++++||+|||++|++|+
T Consensus 94 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~ 125 (488)
T 3eml_A 94 FIACFVLVLTQSSIFSLLAIAIDRYIAIRIPL 125 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhheeEeccc
Confidence 99999999999999999999999999999995
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.86 E-value=2.4e-22 Score=139.76 Aligned_cols=109 Identities=20% Similarity=0.388 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhh
Q psy13007 19 YVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMV 98 (128)
Q Consensus 19 ~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 98 (128)
..+....+++.+++++|++||++++.++.++|++|+++|+++.|||++|++.++...|..+.....+ +|.+++..|++.
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~-~~~~~~~~C~~~ 87 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRG-TWLWGSFLCELW 87 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHS-SCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcC-CeeccccHHHHH
Confidence 4456677889999999999999999999999999999999999999999999888888887776655 489999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 99 SFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 99 ~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
.++...+..+|+++++++|+|||+||++|+
T Consensus 88 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~ 117 (315)
T 4amj_A 88 TSLDVLCVTASIETLCVIAIDRYLAITSPF 117 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999984
No 16
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.85 E-value=2.5e-21 Score=144.35 Aligned_cols=104 Identities=20% Similarity=0.278 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHHhhhHH
Q psy13007 22 FPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICIMVSFL 101 (128)
Q Consensus 22 ~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~ 101 (128)
....+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++...|..+.. ....|..+...|++..++
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~--~~~~~~~~~~~c~~~~~~ 141 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS--GATTYKLTPAQWFLREGS 141 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS--GGGGTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc--cccceeeCccccchHHHH
Confidence 667788999999999999999999999999999999999999999999999888877766 233478899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 102 SETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 102 ~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
..++..+|++++++||+|||+||+ |+
T Consensus 142 ~~~~~~~S~~~l~~isidRy~aI~-p~ 167 (520)
T 3v2y_A 142 MFVALSASVFSLLAIAIERYITML-KM 167 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-C-
T ss_pred HHHHHHHHHHHHHHHHHHHhhEEe-cc
Confidence 999999999999999999999999 85
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.85 E-value=3.1e-21 Score=140.94 Aligned_cols=108 Identities=22% Similarity=0.444 Sum_probs=97.2
Q ss_pred hHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHh-hHHHHHHHHhhCccccchhhHHhh
Q psy13007 20 VIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWG-IPSEIIYIWHKYPYMFDETICIMV 98 (128)
Q Consensus 20 ~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~-~~~~~~~~~~~~~~~~~~~~C~~~ 98 (128)
......+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.++.. +|..+...... .|.+++..|++.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~-~~~~~~~~C~~~ 111 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK-KWIFGFAACKVY 111 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTT-SCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcC-CccCCHHHHHHH
Confidence 4566777889999999999999999999999999999999999999999998864 77777666554 488899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 99 SFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 99 ~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
.++..++..+|+++++++++|||++|++|+
T Consensus 112 ~~~~~~~~~~S~~~l~~isidRy~aI~~P~ 141 (448)
T 2z73_A 112 GFIGGIFGFMSIMTMAMISIDRYNVIGRPM 141 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999995
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.85 E-value=1.3e-21 Score=145.53 Aligned_cols=111 Identities=27% Similarity=0.444 Sum_probs=100.6
Q ss_pred cchhHHHHHHHHHHHHHHHhhhhhheeeeEecCCCCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhCccccchhhHH
Q psy13007 17 PLYVIFPVTVIYVIILVTGCFGNLCTCVVIARNKHMHTATNYYLFSLAVSDLLMLFWGIPSEIIYIWHKYPYMFDETICI 96 (128)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~gi~~N~~vl~~i~~~~~~~~~~~~~l~~La~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~C~ 96 (128)
.........+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.++...|..+.....+ .|.+++..|+
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~-~~~~~~~~C~ 256 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK-TWTFGNFWCE 256 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHT-SCCSCSHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcC-CeeCCcchhh
Confidence 344556677889999999999999999999999999999999999999999999988899888877665 4889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHhhhhcCC
Q psy13007 97 MVSFLSETSANATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 97 ~~~~~~~~~~~~s~~~l~~iaidRy~ai~~Pl 128 (128)
+..++..++..+|++++++||+|||++|++|+
T Consensus 257 ~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl 288 (514)
T 3sn6_R 257 FWTSIDVLCVTASIETLCVIAVDRYFAITSPF 288 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999994
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.46 E-value=3.4e-08 Score=46.25 Aligned_cols=21 Identities=19% Similarity=0.583 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhHhhhhcCC
Q psy13007 108 ATVLTITAFTVERYIAICHPF 128 (128)
Q Consensus 108 ~s~~~l~~iaidRy~ai~~Pl 128 (128)
+|++++++|++|||+||++|+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl 22 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAI 22 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhhhhh
Confidence 688999999999999999984
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.17 E-value=0.00011 Score=39.65 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHhhhhhheeeeEecCCC
Q psy13007 23 PVTVIYVIILVTGCFGNLCTCVVIARNKH 51 (128)
Q Consensus 23 ~~~~~~~~~~~~gi~~N~~vl~~i~~~~~ 51 (128)
...++|++++++|++||+++++++.++|-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~ 58 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKG 58 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecc
Confidence 66788999999999999999998876553
Done!