Query psy13008
Match_columns 638
No_of_seqs 256 out of 1649
Neff 6.1
Searched_HMMs 46136
Date Fri Aug 16 16:59:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12425 fumarate hydratase; P 100.0 1E-104 2E-109 876.9 49.8 460 6-468 2-462 (464)
2 PRK14515 aspartate ammonia-lya 100.0 1.1E-99 2E-104 837.9 50.0 462 2-467 7-469 (479)
3 TIGR00979 fumC_II fumarate hyd 100.0 1.6E-99 3E-104 835.1 48.8 457 6-465 1-458 (458)
4 PLN00134 fumarate hydratase; P 100.0 2.9E-99 6E-104 833.0 49.8 454 13-467 1-455 (458)
5 PRK00485 fumC fumarate hydrata 100.0 2.1E-98 4E-103 829.0 49.6 461 3-466 1-462 (464)
6 PRK13353 aspartate ammonia-lya 100.0 3.9E-98 8E-103 827.5 47.3 458 5-466 4-462 (473)
7 COG0114 FumC Fumarase [Energy 100.0 2.2E-97 5E-102 773.0 46.4 459 5-466 2-461 (462)
8 PRK12273 aspA aspartate ammoni 100.0 8E-97 2E-101 816.9 47.9 462 3-467 2-465 (472)
9 TIGR00839 aspA aspartate ammon 100.0 5.3E-94 1.1E-98 792.0 48.8 459 7-467 1-461 (468)
10 COG1027 AspA Aspartate ammonia 100.0 3.6E-94 7.8E-99 746.7 44.2 464 3-468 1-465 (471)
11 cd01357 Aspartase Aspartase. T 100.0 4.5E-94 9.7E-99 791.3 47.3 447 7-459 1-450 (450)
12 cd01362 Fumarase_classII Class 100.0 2.5E-92 5.3E-97 778.0 49.8 453 7-462 1-454 (455)
13 cd01596 Aspartase_like asparta 100.0 1.1E-88 2.3E-93 747.7 48.9 448 7-459 1-450 (450)
14 KOG1316|consensus 100.0 1.4E-87 2.9E-92 685.8 29.3 422 22-499 7-446 (464)
15 COG0165 ArgH Argininosuccinate 100.0 4.1E-86 8.9E-91 712.2 36.3 436 22-512 4-457 (459)
16 KOG1317|consensus 100.0 1.2E-83 2.6E-88 652.1 37.5 461 4-466 26-486 (487)
17 PLN02646 argininosuccinate lya 100.0 1.3E-78 2.9E-83 671.5 37.8 428 29-511 28-469 (474)
18 PRK09053 3-carboxy-cis,cis-muc 100.0 8.1E-78 1.8E-82 663.9 37.1 414 20-469 8-438 (452)
19 PRK00855 argininosuccinate lya 100.0 1.3E-75 2.9E-80 647.4 39.5 435 21-510 4-456 (459)
20 cd01597 pCLME prokaryotic 3-ca 100.0 2.5E-75 5.5E-80 642.2 39.0 411 20-469 2-429 (437)
21 PRK08540 adenylosuccinate lyas 100.0 1.4E-75 3E-80 646.0 36.3 412 18-469 4-435 (449)
22 TIGR00928 purB adenylosuccinat 100.0 2.4E-75 5.3E-80 641.8 36.0 411 20-469 1-430 (435)
23 PRK04833 argininosuccinate lya 100.0 9.8E-75 2.1E-79 639.0 39.0 427 22-509 6-453 (455)
24 TIGR00838 argH argininosuccina 100.0 7.2E-75 1.6E-79 641.2 37.6 418 44-512 23-454 (455)
25 PRK08470 adenylosuccinate lyas 100.0 8.6E-75 1.9E-79 637.4 37.6 401 23-469 4-435 (442)
26 PRK07492 adenylosuccinate lyas 100.0 4.5E-74 9.7E-79 629.9 38.4 407 21-470 2-427 (435)
27 PRK06705 argininosuccinate lya 100.0 2.1E-74 4.5E-79 642.1 36.1 422 44-513 33-472 (502)
28 PRK07380 adenylosuccinate lyas 100.0 2.9E-73 6.2E-78 622.9 39.4 403 23-470 4-425 (431)
29 PRK06390 adenylosuccinate lyas 100.0 2.3E-73 5E-78 628.1 36.8 415 16-469 2-433 (451)
30 COG0015 PurB Adenylosuccinate 100.0 4.2E-73 9.1E-78 612.9 36.5 405 20-469 1-430 (438)
31 cd01359 Argininosuccinate_lyas 100.0 2.5E-72 5.5E-77 618.2 39.5 391 44-467 4-413 (435)
32 cd03302 Adenylsuccinate_lyase_ 100.0 9.6E-71 2.1E-75 604.7 40.2 407 20-466 1-436 (436)
33 cd01595 Adenylsuccinate_lyase_ 100.0 3.7E-71 8.1E-76 599.3 32.4 359 44-431 6-375 (381)
34 PRK12308 bifunctional arginino 100.0 5.1E-70 1.1E-74 622.5 37.5 420 44-515 20-459 (614)
35 cd01360 Adenylsuccinate_lyase_ 100.0 6.6E-70 1.4E-74 590.3 36.1 364 23-431 1-374 (387)
36 PRK02186 argininosuccinate lya 100.0 8E-70 1.7E-74 643.9 37.2 430 22-514 413-858 (887)
37 PRK06389 argininosuccinate lya 100.0 4.1E-67 8.8E-72 569.4 34.4 353 44-440 27-390 (434)
38 TIGR02426 protocat_pcaB 3-carb 100.0 2.1E-66 4.5E-71 553.6 34.2 336 20-395 2-338 (338)
39 PRK09285 adenylosuccinate lyas 100.0 2.9E-66 6.2E-71 570.5 32.2 415 17-470 9-451 (456)
40 cd01334 Lyase_I Lyase class I 100.0 5.2E-65 1.1E-69 540.7 34.0 323 49-398 1-325 (325)
41 PRK05975 3-carboxy-cis,cis-muc 100.0 4.3E-64 9.2E-69 537.7 34.1 336 20-397 11-347 (351)
42 cd01598 PurB PurB_like adenylo 100.0 3.5E-63 7.5E-68 541.0 34.9 393 44-465 6-424 (425)
43 PLN02848 adenylosuccinate lyas 100.0 8.1E-63 1.8E-67 542.6 36.0 414 17-469 12-453 (458)
44 PF00206 Lyase_1: Lyase; Inte 100.0 6.4E-62 1.4E-66 514.3 22.0 307 14-346 1-312 (312)
45 KOG2700|consensus 100.0 8.2E-48 1.8E-52 406.3 25.3 441 16-495 6-480 (481)
46 cd01594 Lyase_I_like Lyase cla 100.0 2.3E-33 4.9E-38 282.7 24.8 163 135-355 34-198 (231)
47 PRK08937 adenylosuccinate lyas 100.0 4.4E-29 9.4E-34 250.7 18.0 178 284-465 22-216 (216)
48 PF10415 FumaraseC_C: Fumarase 98.6 1.8E-08 4E-13 80.2 2.9 55 412-466 1-55 (55)
49 PF14698 ASL_C2: Argininosucci 97.9 8E-06 1.7E-10 68.4 3.5 60 411-489 2-70 (70)
50 PF10397 ADSL_C: Adenylosuccin 97.9 4.4E-06 9.6E-11 71.7 1.5 57 414-470 11-76 (81)
51 PF08328 ASL_C: Adenylosuccina 91.0 0.65 1.4E-05 42.6 6.3 73 390-464 32-115 (115)
52 KOG2700|consensus 89.2 5.2 0.00011 44.6 12.5 33 179-212 224-256 (481)
53 PF10925 DUF2680: Protein of u 62.0 27 0.00058 28.4 5.9 39 46-84 10-49 (59)
54 PF05393 Hum_adeno_E3A: Human 54.7 12 0.00026 32.8 2.8 26 588-613 36-61 (94)
55 PRK13454 F0F1 ATP synthase sub 52.9 20 0.00043 35.5 4.5 62 553-618 3-64 (181)
56 PRK06568 F0F1 ATP synthase sub 36.9 44 0.00096 32.4 4.0 32 587-618 6-37 (154)
57 PF10078 DUF2316: Uncharacteri 36.5 1.7E+02 0.0036 26.0 7.1 57 433-502 20-77 (89)
58 PF06809 NPDC1: Neural prolife 31.9 98 0.0021 33.4 5.9 37 501-537 128-164 (341)
59 PF12273 RCR: Chitin synthesis 25.9 59 0.0013 30.2 2.8 14 588-601 4-17 (130)
60 PRK09174 F0F1 ATP synthase sub 24.2 1.2E+02 0.0026 30.6 4.9 47 566-616 38-84 (204)
61 PRK05759 F0F1 ATP synthase sub 23.8 94 0.002 29.4 3.8 33 585-617 4-36 (156)
62 PRK05414 urocanate hydratase; 22.8 61 0.0013 37.2 2.6 101 392-497 193-337 (556)
63 TIGR01228 hutU urocanate hydra 21.5 68 0.0015 36.7 2.6 100 393-497 185-328 (545)
No 1
>PRK12425 fumarate hydratase; Provisional
Probab=100.00 E-value=1e-104 Score=876.86 Aligned_cols=460 Identities=59% Similarity=0.954 Sum_probs=442.2
Q ss_pred cccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH
Q psy13008 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (638)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~ 84 (638)
+|+|+|++|+++||.+.|||.+|+|++.||++++. +.++++|+++..|++|||+||.+.| |+++++++|.++|++|.
T Consensus 2 ~r~e~d~~g~~~~p~~~~~g~~t~ra~~nf~~~~~--~~~~~~i~a~~~ik~Aha~~l~~~G~l~~~~~~~I~~al~ei~ 79 (464)
T PRK12425 2 SRTETDSLGPIEVPEDAYWGAQTQRSLINFAIGKE--RMPLAVLHALALIKKAAARVNDRNGDLPADIARLIEQAADEVL 79 (464)
T ss_pred CCcCcccCCCCCCcccccchHHHHHHHHcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999987 4789999999999999999999999 99999999999999998
Q ss_pred cCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy13008 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (638)
Q Consensus 85 ~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L 164 (638)
++.. +++|++++++.+.+||+|||+||||++++.+++|++.|++.+||||+|||+||||||+++|+++|++|+.+.+.|
T Consensus 80 ~~~~-~~~f~~~~~~~g~~ed~~mnvnevi~~~~~e~~G~~~g~~~~vhpn~~vh~g~S~ND~~~Ta~~L~~r~~l~~~l 158 (464)
T PRK12425 80 DGQH-DDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNGRGGKSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEQL 158 (464)
T ss_pred cCcc-cCCCCccCCCCCCcchHHHHHHHHHHHHHHHHhCcccccccccCchhcccCCCChhhHHHHHHHHHHHHHHHHHH
Confidence 8766 789999999998899999999999999999999977887778999999999999999999999999999874359
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCc
Q psy13008 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (638)
Q Consensus 165 ~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~ 244 (638)
.+.|..++++|.++|++|++|+||||||+||||||||||||++|+++|.||++||.+++++++.+|+||||+||++++++
T Consensus 159 ~~~L~~l~~~L~~~A~~~~~tim~GrTHlQ~A~PiT~G~~~~a~~~~l~rd~~RL~~~~~r~~~~plGggAvGT~~~~~~ 238 (464)
T PRK12425 159 LPAIAELSGGLAEQSARHAKLVKTGRTHMMDATPITFGQELSAFVAQLDYAERAIRAALPAVCELAQGGTAVGTGLNAPH 238 (464)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeecccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhcCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCC
Q psy13008 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (638)
Q Consensus 245 ~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSi 324 (638)
+|++.+.+.|++.|||+.++.+|++|++++||+++|+++++++++++|+|||+||++|+|+|++||||+.+|+.++||||
T Consensus 239 ~~~~~~~~~La~~LG~~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llsS~p~~g~~ei~lp~~~~GSSi 318 (464)
T PRK12425 239 GFAEAIAAELAALSGLPFVTAPNKFAALAGHEPLVSLSGALKTLAVALMKIANDLRLLGSGPRAGLAEVRLPANEPGSSI 318 (464)
T ss_pred cHHHHHHHHHHHHhCCCCcccccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCceEEECCCCCCCCCC
Confidence 99999999999999999877899999999999999999999999999999999999999999999999999988999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHH
Q psy13008 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (638)
Q Consensus 325 MPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~ 404 (638)
|||||||+.+|.++++|+++.|++.+++....+++++.+.+++.+.+.++++++++.++++.++.+|+++|+||++||++
T Consensus 319 MPqK~NP~~~E~i~~~a~~v~G~~~~v~~~~~~~~~q~n~~~~~~~~~~l~s~~~l~~~~~~~~~~~i~~l~vn~erm~~ 398 (464)
T PRK12425 319 MPGKVNPTQCEALSMLACQVMGNDATIGFAASQGHLQLNVFKPVIIHNLLQSIRLLADGCRNFQQHCVAGLEPDAEQMAA 398 (464)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999988777888998888888888999999999999999999999999999999999
Q ss_pred hhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCC
Q psy13008 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEY 468 (638)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~ 468 (638)
+++.+++++|+|++++||++||+++++|.++|++++|++.+.+.+++++++++|||.+|+|+..
T Consensus 399 ~l~~~~~~at~L~~~ig~~~A~~ia~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~~ 462 (464)
T PRK12425 399 HLERGLMLVTALNPHIGYDKAAEIAKKAYAEGTTLREAALALGYLTDEQFDAWVRPENMLEAGG 462 (464)
T ss_pred HHHcccHHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999864
No 2
>PRK14515 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=1.1e-99 Score=837.87 Aligned_cols=462 Identities=44% Similarity=0.732 Sum_probs=440.9
Q ss_pred CCCCcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHH
Q psy13008 2 GKDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAA 80 (638)
Q Consensus 2 ~~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al 80 (638)
++..+|+|+|++|++++|.+.|||.+|+|++.||++++. +.|..++++++.+++|||+||.+.| |+++++++|.++|
T Consensus 7 ~~~~~r~e~d~~g~~~~p~~~~~g~~t~ra~~~f~~~~~--~~~~~~i~~~~~v~~A~a~~l~~~G~l~~~~~~~I~~al 84 (479)
T PRK14515 7 VKNGVRIEKDFLGEKEVPNYAYYGVQTMRAVENFPITGY--KIHEGLIKAFAIVKKAAALANTDVGRLELNKGGAIAEAA 84 (479)
T ss_pred CCCCCccccccCCCCCCcccccchHHHHHHHHhccCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 566799999999999999999999999999999998775 4789999999999999999999999 9999999999999
Q ss_pred HHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHH
Q psy13008 81 DEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEI 160 (638)
Q Consensus 81 ~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l 160 (638)
++|.++.+ +++|++++++++.+++.|||+|+|||+++++++|++.|++.+||||||||+|||||||++|+++|++|+.+
T Consensus 85 ~ei~~~~~-~~~f~~~~~~~g~~t~~nmnvnevie~~~~~~~G~~~g~~~~~hpnd~vn~grS~ND~v~Ta~~L~~~~~l 163 (479)
T PRK14515 85 QEILDGKW-HDHFIVDPIQGGAGTSMNMNANEVIANRALELLGMEKGDYHYISPNSHVNMAQSTNDAFPTAIHIATLNAL 163 (479)
T ss_pred HHHHcCcc-cCCCCCCcccCCCcccccchHHHHHHHHHHHHhCcccCCccccCccccCCCCCCchhHHHHHHHHHHHHHH
Confidence 99998776 78999999999899999999999999999999997779999999999999999999999999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCC
Q psy13008 161 HNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGL 240 (638)
Q Consensus 161 ~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~ 240 (638)
. .|.+.|..++++|.++|++|++++||||||+||||||||||||++|+++|.||++||.+++++++.+||||||+||++
T Consensus 164 ~-~l~~~L~~L~~~L~~~A~~~~~~vm~GrTHlQ~A~PiT~G~~~~~~a~~l~r~~~RL~~~~~~l~~~pLG~gAvGT~~ 242 (479)
T PRK14515 164 E-GLLQTMGYMHDVFELKAEQFDHVIKMGRTHLQDAVPIRLGQEFKAYSRVLERDMKRIQQSRQHLYEVNMGATAVGTGL 242 (479)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhcCCcccchhccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCC
Confidence 6 599999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCC
Q psy13008 241 NTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEP 320 (638)
Q Consensus 241 ~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~ 320 (638)
++++++..++...+++.+|+..++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++||+||.+|++++
T Consensus 243 ~~~~~~~~~~l~~la~~~gl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~kiA~Dl~llsS~p~~g~~Ei~lp~~~~ 322 (479)
T PRK14515 243 NADPEYIEAVVKHLAAISELPLVGAEDLVDATQNTDAYTEVSAALKVCMMNMSKIANDLRLMASGPRVGLAEIMLPARQP 322 (479)
T ss_pred CCChhHHHHHHHHHHHHhCCCCCCCcchHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCeeEEeCCCCCC
Confidence 99999999999999999999887777999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChH
Q psy13008 321 GSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNED 400 (638)
Q Consensus 321 GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~e 400 (638)
|||||||||||+.+|.++++|+++.|+..++++...+++++++.+.|.+...++.+++.+.+++..++.+|+++|+||++
T Consensus 323 GSSiMP~KrNP~~~E~i~~~a~~v~G~~~~~~~~~~~~~le~n~~~p~i~~~l~~si~~l~~al~~~~~~~l~gl~vn~e 402 (479)
T PRK14515 323 GSSIMPGKVNPVMPEVINQIAFQVIGNDHTICLASEAGQLELNVMEPVLVFNLLQSISIMNNGFRAFTDNCLKGIEANED 402 (479)
T ss_pred CcCCCCcccCchHHHHHHHHHHHHHhHHHHHHHHHhcccHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHccCEECHH
Confidence 99999999999999999999999999999998777788889888778777889999999998887788889999999999
Q ss_pred HHHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy13008 401 TIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (638)
Q Consensus 401 rm~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a 467 (638)
||++++..+++++|+|++++||+.+++++++|.++|++++|++.+.+.++++|++++|||.+++++.
T Consensus 403 rm~~~l~~s~~l~t~La~~iG~~~v~~~a~~A~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 469 (479)
T PRK14515 403 RLKEYVEKSVGIITAVNPHIGYEAAARVAKEAIATGQSVRELCVKNGVLSQEDLELILDPFEMTHPG 469 (479)
T ss_pred HHHHHHHhCccHHHHhcchhcHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHhCCHHHcCCCC
Confidence 9999999999999999999999999999999999999999999998889999999999999999864
No 3
>TIGR00979 fumC_II fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs.
Probab=100.00 E-value=1.6e-99 Score=835.08 Aligned_cols=457 Identities=69% Similarity=1.075 Sum_probs=433.9
Q ss_pred cccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH
Q psy13008 6 VRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (638)
Q Consensus 6 ~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~ 84 (638)
||+|+|++|++++|.++|||.+|.|++.||++++. ..+++++++|++||+|||+||.++| ||++++++|.++|+++.
T Consensus 1 ~r~e~d~~g~~~~p~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~a~~~~Giip~~~a~~I~~a~~~i~ 78 (458)
T TIGR00979 1 FRIEKDSMGEIQVPADKYWGAQTQRSLENFKIGTE--KMPLELIHAFAILKKAAAIVNEDLGKLDAKKADAIVQAADEIL 78 (458)
T ss_pred CCCccccCCCCCCcccchhhHHHHHHHhcCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999987 4779999999999999999999999 99999999999999998
Q ss_pred cCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy13008 85 SGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (638)
Q Consensus 85 ~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L 164 (638)
++.+ +++|+.+.++.+.++++||++|+||+.++.+.+|++.|++-++|+|||||+|+||||+++|+++|++|+.+.+.|
T Consensus 79 ~~~~-~~~~~~~~~~~~~~~~~~m~~~~via~~l~e~~g~~~g~~~~vH~~d~vn~G~S~nDiv~Ta~~L~lr~~l~~~l 157 (458)
T TIGR00979 79 AGKL-DDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGSKQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQL 157 (458)
T ss_pred hccc-cCCCceecccccccccccccHHHHHHHHHHHHcCcccCCCceeCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 7665 688998888888899999999999999999999877777667899999999999999999999999999874459
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCc
Q psy13008 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (638)
Q Consensus 165 ~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~ 244 (638)
.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+|+||++++++
T Consensus 158 ~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~ 237 (458)
T TIGR00979 158 IPALENLKKTLDAKSKEFAHIVKIGRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHP 237 (458)
T ss_pred HHHHHHHHHHHHHHHHHccCCeeecccccccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhcCCccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred hhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCC
Q psy13008 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (638)
Q Consensus 245 ~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSi 324 (638)
+++.++++++++.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|++++||||
T Consensus 238 ~~~~~v~~~~a~~LGl~~~~~~n~~~~~~~rD~~~e~~~~La~la~~L~kia~Dl~llss~~~~e~gev~~p~~~~GSSi 317 (458)
T TIGR00979 238 GFDEKVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRCGLGELFIPENEPGSSI 317 (458)
T ss_pred hHHHHHHHHHHHHhCCCCeecCcHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCceeEECCCCCCCCCC
Confidence 98899999999999999877899999999999999999999999999999999999999999999999999998999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHH
Q psy13008 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (638)
Q Consensus 325 MPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~ 404 (638)
|||||||+.+|.|+++|+++.|+..+++.....++++.+.+++.+.|.++++++.+.+++..++..|+++|+||+|||++
T Consensus 318 MP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~erm~~ 397 (458)
T TIGR00979 318 MPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPVIIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQ 397 (458)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhhHHHHHHHHHhccchhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999986655666776667888889999999999999998888999999999999999
Q ss_pred hhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccC
Q psy13008 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLG 465 (638)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg 465 (638)
|+..+++++|+|++++||++||++++++.++|++|+|++.+.+.+++++++++|||.+|+|
T Consensus 398 nl~~~~~~~t~La~~lg~~~A~~~~~~a~~~~~~~~e~~~~~~~l~~~el~~~ldp~~~~~ 458 (458)
T TIGR00979 398 LLNNSLMLVTALNPHIGYDNAAKIAKKAHKEGITLKEAALELGLLSEEEFDEWVVPEQMVG 458 (458)
T ss_pred HHHcCccHHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHHHHcCHHHhcC
Confidence 9999999999999999999999999999999999999999988899999999999999986
No 4
>PLN00134 fumarate hydratase; Provisional
Probab=100.00 E-value=2.9e-99 Score=832.99 Aligned_cols=454 Identities=71% Similarity=1.081 Sum_probs=432.2
Q ss_pred CCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccC
Q psy13008 13 FGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYED 91 (638)
Q Consensus 13 ~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~ 91 (638)
+|++++|.+.|||.+|.|++.||+++|...+.+++++++++.|++||++||.+.| ||++++++|.++|++|.++.. .+
T Consensus 1 ~g~~~~p~~~~~g~~t~ra~~nf~~~~~~~~~~~~~i~a~~~v~~A~a~~l~~~G~l~~~~a~~I~~al~ei~~~~~-~~ 79 (458)
T PLN00134 1 MGPIQVPADKLWGAQTQRSLQNFEIGGERERMPEPIVRAFGIVKKAAAKVNMEYGLLDPDIGKAIMQAADEVAEGKL-DD 79 (458)
T ss_pred CCCccCCcccchhHHHHHHHHhcCCCCCccCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cC
Confidence 6999999999999999999999999994445789999999999999999999999 999999999999999988665 78
Q ss_pred CccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 92 HFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQML 171 (638)
Q Consensus 92 ~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L 171 (638)
+|++++++.+.++++||++|+|||++++|.+|++.|++.++|||||||+||||||+++|+++|++|+.+...|.+.|.++
T Consensus 80 ~f~~~~~~~g~g~~~~~~v~evie~~l~e~~g~~~g~~~~lHp~d~vh~G~S~nDiv~Ta~~L~~~~~~~~~l~~~l~~l 159 (458)
T PLN00134 80 HFPLVVWQTGSGTQTNMNANEVIANRAAEILGGPVGEKSPVHPNDHVNRSQSSNDTFPTAMHIAAATEIHSRLIPALKEL 159 (458)
T ss_pred CccccccccCCcccccCcHHHHHHHHHHHHhCcccCCccccCcccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999878887557999999999999999999999999966455699999999
Q ss_pred HHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHH
Q psy13008 172 HDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCT 251 (638)
Q Consensus 172 ~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~ 251 (638)
+++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+|+||+++++++++.+++
T Consensus 160 ~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~ 239 (458)
T PLN00134 160 HESLRAKSFEFKDIVKIGRTHLQDAVPLTLGQEFSGYATQVKYGLNRVQCTLPRLYELAQGGTAVGTGLNTKKGFDEKIA 239 (458)
T ss_pred HHHHHHHHHHhcCCccccccccCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCccCChhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCCCCCCCh
Q psy13008 252 QRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNP 331 (638)
Q Consensus 252 ~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP 331 (638)
+++|+.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|+.++|||||||||||
T Consensus 240 ~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~kia~Dl~llss~p~~e~gev~lp~~~~GSSiMP~KrNP 319 (458)
T PLN00134 240 AAVAEETGLPFVTAPNKFEALAAHDAFVELSGALNTVAVSLMKIANDIRLLGSGPRCGLGELNLPENEPGSSIMPGKVNP 319 (458)
T ss_pred HHHHHHhCCCCCCCccHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCcceEECCCCCCCCCCCCCCcCC
Confidence 99999999998668999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred hHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhh
Q psy13008 332 TQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (638)
Q Consensus 332 ~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~ 411 (638)
+.+|.++++|+++.|++.+++.....++++.+.+++++.|.++++++.+.+++..++..|+++|+||++||++|++.+++
T Consensus 320 v~~E~i~~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~l~~l~vn~erm~~~l~~~~~ 399 (458)
T PLN00134 320 TQCEALTMVCAQVMGNHVAITVGGSAGHFELNVFKPLIAYNLLHSIRLLGDASASFRKNCVRGIEANRERISKLLHESLM 399 (458)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccc
Confidence 99999999999999999998865557788887788988999999999999999988889999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy13008 412 LVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (638)
Q Consensus 412 lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a 467 (638)
++|+|++++||++||++++++.++|++++|++.+.+.|+++|++++|||.+|+|+.
T Consensus 400 l~~~La~~ig~~~A~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~ldP~~~~~~~ 455 (458)
T PLN00134 400 LVTALNPKIGYDKAAAVAKKAHKEGTTLKEAALKLGVLTAEEFDELVVPEKMTGPS 455 (458)
T ss_pred hHHHhhhccCHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHhcCCC
Confidence 99999999999999999999999999999999998889999999999999999963
No 5
>PRK00485 fumC fumarate hydratase; Reviewed
Probab=100.00 E-value=2.1e-98 Score=828.98 Aligned_cols=461 Identities=70% Similarity=1.076 Sum_probs=432.6
Q ss_pred CCCcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHH
Q psy13008 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (638)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~ 81 (638)
|++||+|+|++|++++|.+++||+++.+++.+|++++. ..|.+++++|+++++|||+||.++| ||++++++|.++|+
T Consensus 1 ~~~~r~e~d~~g~~~~~~~~l~g~~~~~~~~~f~~s~~--~~~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~ 78 (464)
T PRK00485 1 MMETRIEKDSMGEVEVPADALWGAQTQRSLENFPIGGE--RMPRELIRALALLKKAAARVNAELGLLDAEKADAIVAAAD 78 (464)
T ss_pred CCCcccccccCCCcCCccccccchhhHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 56699999999999999999999999999999998865 3789999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHH
Q psy13008 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (638)
Q Consensus 82 ~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~ 161 (638)
++.++.. +++|+.++.+.+.++++||++|++|+.++.+..|++.|.+.++|+++|||+|||||||++|+++|++|+++.
T Consensus 79 ~i~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~g~~~~~~~~~h~~~~vh~G~SrnD~v~Ta~~L~lr~~l~ 157 (464)
T PRK00485 79 EVIAGKH-DDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAIV 157 (464)
T ss_pred HHHhCcc-ccCCCcchhhccccccccccHHHHHHHHHHHhcCccccccCccCccccCCCCCCchhHHHHHHHHHHHHHHH
Confidence 9866444 677888888888899999999999999777766754443445799999999999999999999999999872
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCC
Q psy13008 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (638)
Q Consensus 162 ~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~ 241 (638)
..|.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 158 ~~l~~~l~~l~~~L~~~A~~~~dt~m~GrTH~Q~A~PiTfG~~~~~~~~~l~R~~~RL~~~~~r~~~~pLGg~AvGT~~~ 237 (464)
T PRK00485 158 ERLLPALEHLRDTLAAKAEEFADIVKIGRTHLQDATPLTLGQEFSGYAAQLEHGIERIEAALPHLYELALGGTAVGTGLN 237 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeeeeecCcCceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcc
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999977899999
Q ss_pred CCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCC
Q psy13008 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (638)
Q Consensus 242 ~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~G 321 (638)
++++++.++++++|++|||+.++.+|++|++++||+++|+++++++++++|+|||+||++|+|+|++|||||.+|++++|
T Consensus 238 ~~~~~~~~v~~~~A~~LGl~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~ria~Dl~l~ss~~~~e~gev~lp~~~~G 317 (464)
T PRK00485 238 AHPGFAERVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLASGPRCGLGEISLPENEPG 317 (464)
T ss_pred CChhHHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCceEEcCCCCCC
Confidence 99999999999999999999668999999999999999999999999999999999999999999999999999998999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHH
Q psy13008 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (638)
Q Consensus 322 SSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~er 401 (638)
||||||||||+.+|+|+++|+++.|++.+++....+++++++...+...|.++++++.+.++++.++..++++|+||++|
T Consensus 318 SSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~v~~er 397 (464)
T PRK00485 318 SSIMPGKVNPTQCEALTMVCAQVMGNDAAVTFAGSQGNFELNVFKPVIAYNFLQSIRLLADAMRSFADHCVVGIEPNRER 397 (464)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHhhhHHHHHHHhccCcccccccChHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHH
Confidence 99999999999999999999999999999987777889999887776689999999999999998888999999999999
Q ss_pred HHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy13008 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~ 466 (638)
|++|+..+++++|+|++++||++||++++++.++|.+|+|++.+.+.+++++++++|||.+|+|+
T Consensus 398 m~~~l~~~~~~~t~La~~lg~~~A~~~~~~a~~~g~~l~~~~~~~~~l~~~~l~~~ldP~~~~~~ 462 (464)
T PRK00485 398 IKELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRWVDPEKMTGP 462 (464)
T ss_pred HHHHHHhCCeeHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHhcCC
Confidence 99999999999999999999999999999999999999999999888999999999999999997
No 6
>PRK13353 aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=3.9e-98 Score=827.55 Aligned_cols=458 Identities=48% Similarity=0.777 Sum_probs=430.3
Q ss_pred CcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHH
Q psy13008 5 GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV 83 (638)
Q Consensus 5 ~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i 83 (638)
++|+|+|++|+++||.+.|||.+|+|++.||++++. +.+.+++++|+++++|||+||.++| ||++++++|.++|+++
T Consensus 4 ~~r~~~d~~g~~~~~~~~~~g~~t~r~~~~f~~~~~--~~~~~~i~a~~~ve~A~a~~l~~~Glip~~~a~~I~~al~~i 81 (473)
T PRK13353 4 NMRIEHDLLGEKEVPAEAYYGIQTLRAVENFPITGY--KIHPELIRAFAQVKKAAALANADLGLLPRRIAEAIVQACDEI 81 (473)
T ss_pred CcccccccCCCCCCcccccchHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999999985 5789999999999999999999999 9999999999999999
Q ss_pred HcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy13008 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (638)
Q Consensus 84 ~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~ 163 (638)
.++.+ .++|+++.++++.++++|||+|++|++++.+.+|++.|+|.+||+++|||+|||||||++|+++|++|+.+. .
T Consensus 82 ~~~~~-~d~f~~~~~~~~~~~~~~~n~~~vi~~~l~e~~g~~~g~~~~~hp~d~vH~GrSrnD~v~Ta~~L~~r~~l~-~ 159 (473)
T PRK13353 82 LAGKL-HDQFIVDPIQGGAGTSTNMNANEVIANRALELLGGEKGDYHYVSPNDHVNMAQSTNDVFPTAIRIAALNLLE-G 159 (473)
T ss_pred Hhccc-cCCCCcchhhccccchhcchhhHHHHHHHHHHhCccccCCccCCcccCccCCCChhhHHHHHHHHHHHHHHH-H
Confidence 87665 678999998888999999999999999999999977788778999999999999999999999999999876 5
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCC
Q psy13008 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (638)
Q Consensus 164 L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d 243 (638)
|.+.|.+++++|.++|++|+|++||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||+++++
T Consensus 160 l~~~L~~l~~~L~~~A~~~~~~im~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGT~~~~~ 239 (473)
T PRK13353 160 LLAAMGALQDVFEEKAAEFDHVIKMGRTQLQDAVPITLGQEFSAYARALKRDRKRIQQAREHLYEVNLGGTAVGTGLNAD 239 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeeccccCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCccccCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred chhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCC
Q psy13008 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (638)
Q Consensus 244 ~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSS 323 (638)
++++.+++++++++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|++++|||
T Consensus 240 ~~~~~~~~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~la~la~~l~riA~Dl~llss~pr~e~gev~lp~~~~GSS 319 (473)
T PRK13353 240 PEYIERVVKHLAAITGLPLVGAEDLVDATQNTDAFVEVSGALKVCAVNLSKIANDLRLLSSGPRTGLGEINLPAVQPGSS 319 (473)
T ss_pred hhHHHHHHHHHHHHhCCCCccccchHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCceEEECCCCCCCCC
Confidence 99999999999999999976778999999999999999999999999999999999999999999999999999899999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHH
Q psy13008 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (638)
Q Consensus 324 iMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~ 403 (638)
||||||||+.+|.++++|+++.|++.+++....+..++.+..++.+...++++++.+.+++..++..+|++|+||++||+
T Consensus 320 iMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~vn~erm~ 399 (473)
T PRK13353 320 IMPGKVNPVMPEVVNQIAFQVIGNDVTITLAAEAGQLELNVMEPVIAFNLLESISILTNACRAFTDNCVKGIEANEERCK 399 (473)
T ss_pred CCCCCcCChHHHHHHHHHHHHHhHHHHHHHHHHcCChhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 99999999999999999999999999987544444444444555556778888988888988888899999999999999
Q ss_pred HhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy13008 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~ 466 (638)
+|+..+++++|+|++.+||+.+.+++++|.++|++|+|++.+.+.+++++++++|||..|+++
T Consensus 400 ~~l~~~~~l~t~La~~Lgh~~v~~~~~~a~~~g~~l~e~~~~~~~~~~~el~~~ldp~~~v~~ 462 (473)
T PRK13353 400 EYVEKSVGIATALNPHIGYEAAARIAKEAIATGRSVRELALENGLLSEEELDLILDPFRMTHP 462 (473)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhcCC
Confidence 999999999999999999999999999999999999999998888999999999999999985
No 7
>COG0114 FumC Fumarase [Energy production and conversion]
Probab=100.00 E-value=2.2e-97 Score=773.02 Aligned_cols=459 Identities=68% Similarity=1.054 Sum_probs=452.1
Q ss_pred CcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHH
Q psy13008 5 GVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV 83 (638)
Q Consensus 5 ~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i 83 (638)
.+|+|+|++|++++|.|+|||.||+|++.||++|++. .|..+++++..+++|.|+++.++| +|++.+++|.++|++|
T Consensus 2 ~~R~E~Dt~G~i~Vpad~~wgAQTqRs~~nF~ig~~~--mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev 79 (462)
T COG0114 2 TYRIEHDTMGEVEVPADALWGAQTQRSLENFPIGGEK--MPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEV 79 (462)
T ss_pred CcccccccCccccccHHHHHHHHHHHHHhcCCccccc--CcHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999984 899999999999999999999999 9999999999999999
Q ss_pred HcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy13008 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (638)
Q Consensus 84 ~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~ 163 (638)
.+|++ +++||+++||+|+|++.|||+||||++++.+++|++.|.+.+||||||||+|+||||+++||+++....++.+.
T Consensus 80 ~~Gk~-d~~FPl~VwQTGSGTqsNMN~NEVIanrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~ 158 (462)
T COG0114 80 LAGKH-DDHFPLDVWQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNR 158 (462)
T ss_pred HcCcc-cCCCCeEEEecCCCccccccHHHHHHHHHHHHhCcccCCCCCCCCCCcCCcccccCcchhhHHHHHHHHHHHHH
Confidence 99999 99999999999999999999999999999999999999998999999999999999999999999999999889
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCC
Q psy13008 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (638)
Q Consensus 164 L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d 243 (638)
|++.|..|+++|.++|++|.+++.+||||+|+|.|+|||+.|++|+.+|.+.++|++.+.+++...++||+|||||.+.+
T Consensus 159 LiPaL~~L~~~L~~Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAVGTGlNa~ 238 (462)
T COG0114 159 LIPALKHLIKTLAAKAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAVGTGLNAH 238 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhcCcccccccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCC
Q psy13008 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (638)
Q Consensus 244 ~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSS 323 (638)
++|++++.+.++++.|+++.+.+|.+.+.+++|.++++..+|..++..|-|||+|||+|.||||+++||+.+|+.+.|||
T Consensus 239 p~f~ekva~~i~~~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lPenePGSS 318 (462)
T COG0114 239 PEFGEKVAEELAELTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELPENEPGSS 318 (462)
T ss_pred ccHHHHHHHHHHHHhCCCcccCCcHHHHHhcchHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCcc
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHH
Q psy13008 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (638)
Q Consensus 324 iMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~ 403 (638)
|||.|.||+.+|.+...|.+|+|+..++..++..+.||+|+++|++.++++.++.+|++++..+.+.|+.||++|+++|+
T Consensus 319 IMPGKVNPtq~EA~tmv~~QV~Gnd~ai~~ags~GnFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~ 398 (462)
T COG0114 319 IMPGKVNPTQCEALTMVAAQVIGNDAAIAFAGSQGNFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIK 398 (462)
T ss_pred CCCCCCCchhHHHHHHHHHHHHcchHHHHHhhccCceeeccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy13008 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~ 466 (638)
++++.+.|++|+|++.|||+.|.+|+++|.++|++++|++.+.+++|++|+++++||++++++
T Consensus 399 ~~l~~SlmLVTaLnp~IGYdkAa~IAK~A~keg~tlreaa~~~G~lte~efd~~v~Pe~mv~~ 461 (462)
T COG0114 399 ELLERSLMLVTALNPHIGYDKAAKIAKKAHKEGTTLREAALELGLLSEEEFDKLVDPEKMVGP 461 (462)
T ss_pred HHHhhCchHHHhcccccchHHHHHHHHHHHHCCCcHHHHHHHcCCCCHHHHHHhcCHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999999999999986
No 8
>PRK12273 aspA aspartate ammonia-lyase; Provisional
Probab=100.00 E-value=8e-97 Score=816.89 Aligned_cols=462 Identities=47% Similarity=0.747 Sum_probs=419.6
Q ss_pred CCCcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHH
Q psy13008 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (638)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~ 81 (638)
|+.+|+|+|++|++++|.+.|||.+|+|++.||+++|+..+..++++++|+++++|||+||.++| ||++++++|.++|.
T Consensus 2 ~~~~r~~~~~~~~~~~~~~~~~~~~t~~~~~~f~~~~~~~~~~~~~~~~~l~ve~A~a~al~~~Gii~~~~a~~I~~al~ 81 (472)
T PRK12273 2 MMNTRIEKDLLGEREVPADAYYGIHTLRAVENFPISGVKISDYPELIRALAMVKKAAALANKELGLLDEEKADAIVAACD 81 (472)
T ss_pred CCCcccccccCCCcCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Confidence 55699999999999999999999999999999999987544449999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHH
Q psy13008 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (638)
Q Consensus 82 ~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~ 161 (638)
++.++.. +++|+++.++++.+++.||++|++|+.++.+.+|++.|++.++|+|+|||+|||||||++|+++|++|+++.
T Consensus 82 ~i~~~~~-~~~~~~~~~~~~~~e~~~~~v~~~i~~~~~e~~g~~~~~~~~vHp~d~v~~GrSrnD~v~Ta~~L~lr~~l~ 160 (472)
T PRK12273 82 EILAGKL-HDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDAYPTAIRIALLLSLR 160 (472)
T ss_pred HHHhccc-cCCcccchhhccccchhhhHHHHHHHHHHHHHhCcccCCcceeCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Confidence 9876543 566888888888899999999999999777889865565523699999999999999999999999999976
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCC
Q psy13008 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (638)
Q Consensus 162 ~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~ 241 (638)
.|.+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||+++
T Consensus 161 -~l~~~L~~l~~~L~~~A~~~~dt~m~GrTH~Q~AqP~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~plGg~AvGT~~~ 239 (472)
T PRK12273 161 -KLLDALEQLQEAFEAKAKEFADILKMGRTQLQDAVPMTLGQEFGAYAVALAEDRKRLYRAAELLREVNLGATAIGTGLN 239 (472)
T ss_pred -HHHHHHHHHHHHHHHHHHHccCCEEeecccCccceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccceeCCCC
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred CCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCC
Q psy13008 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (638)
Q Consensus 242 ~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~G 321 (638)
++++++.++++++|++|||+.++.+|++|++++||+++|+++++++++++|+|||+||++|+|+||+|||||.+|++++|
T Consensus 240 i~~~~~~~v~~~~A~~LGf~~~~~~n~~da~~~rD~~~e~~~~la~la~~L~rlA~Di~llss~e~~e~gev~lp~~~~G 319 (472)
T PRK12273 240 APPGYIELVVEKLAEITGLPLVPAEDLIEATQDTGAFVEVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAG 319 (472)
T ss_pred CChhHHHHHHHHHHHHcCCCcccCcCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCceEEECCCCCCc
Confidence 99999899999999999999766779999999999999999999999999999999999999999999999999988999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHH-HhhhccccChH
Q psy13008 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTT-KCVTGILPNED 400 (638)
Q Consensus 322 SSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~-~vl~~L~Vn~e 400 (638)
||||||||||+.+|+||++|+++.|++.+++....+..++.+...+.+...+++++..+..++. .+. .++++|+||++
T Consensus 320 SSiMPqKrNP~~~E~ir~~a~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~l~~l~v~~e 398 (472)
T PRK12273 320 SSIMPGKVNPVIPEVVNQVCFQVIGNDTTVTMAAEAGQLELNVMEPVIAYNLFESISILTNACR-TLREKCIDGITANEE 398 (472)
T ss_pred CCCCCcccCcHHHHHHHHHHHHHhhhHHHHHHHHHcCCchhhhhhhhhHHHHHHHHHHHHHHHH-HHHHHHHccCEECHH
Confidence 9999999999999999999999999999887433223333333344445667777887776655 555 59999999999
Q ss_pred HHHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy13008 401 TIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (638)
Q Consensus 401 rm~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a 467 (638)
||++|+..+++++|+|++.+||+.||+++++|.++|+++.|++.+.+.++++|+++++||.+|+++.
T Consensus 399 rm~~~l~~~~~~~t~LA~~L~~~~a~~lv~~a~~~g~~l~~~~~~~~~l~~~el~~~ldp~~~v~~~ 465 (472)
T PRK12273 399 RCREYVENSIGIVTALNPYIGYENAAEIAKEALETGKSVRELVLERGLLTEEELDDILSPENMTHPG 465 (472)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCCHHHHHHHcCHHHhCCCC
Confidence 9999999999999999999999999999999999999999999888889999999999999999864
No 9
>TIGR00839 aspA aspartate ammonia-lyase. Fumarate hydratase scores as high as 570 bits against this model.
Probab=100.00 E-value=5.3e-94 Score=792.01 Aligned_cols=459 Identities=41% Similarity=0.670 Sum_probs=424.3
Q ss_pred ccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHc
Q psy13008 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (638)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~ 85 (638)
|||.|++|++++|.+.|||.+|.|++.||+++|.....+++++++|++++.||++||.++| ||++++++|.++|+++.+
T Consensus 1 r~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~i~~~l~ve~A~a~al~e~GiIp~~~a~~I~~al~~~~d 80 (468)
T TIGR00839 1 RIEEDLLGEREVPADAYYGIHTLRASENFYISNNKISDIPEFVRGMVMVKKAAALANKELGTIPESIANAIVAACDEILN 80 (468)
T ss_pred CCCcccCCCCCCcccccchHHHHHHHHcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999986544459999999999999999999999 999999999999988765
Q ss_pred -CccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHH
Q psy13008 86 -GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRL 164 (638)
Q Consensus 86 -~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L 164 (638)
+++ .+.++++....+.||++|+++|+||+..+.+.+|++.|+|+.+||++|||+||||||+++|+++|++|+.+. .+
T Consensus 81 ~~~~-~~~~~l~~~~~~~g~~~~~~v~~vie~~l~e~~g~~~g~~~H~~p~~~v~~G~S~nD~v~Ta~~L~lr~~l~-~l 158 (468)
T TIGR00839 81 NGKC-HDQFPVDVYQGGAGTSVNMNTNEVIANLALELMGHQKGEYQYLNPNDHVNKSQSTNDAYPTGFRIAVYSSLI-KL 158 (468)
T ss_pred cccc-cccccccHHHccCccccccchHHHHHHHHHHHhCccccCeeecCCCCCCCCCCChhhHHHHHHHHHHHHHHH-HH
Confidence 444 346778877777889999999999999999999877899987889999999999999999999999999875 59
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCc
Q psy13008 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (638)
Q Consensus 165 ~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~ 244 (638)
.+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+|+||++++++
T Consensus 159 ~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~TfG~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~ 238 (468)
T TIGR00839 159 VDAINQLRDGFEQKAKEFADILKMGRTQLQDAVPMTLGQEFEAFSILLEEEVKNIKRTAELLLEVNLGATAIGTGLNTPP 238 (468)
T ss_pred HHHHHHHHHHHHHHHHHccCCeeeccccCccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcceeCCCcCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987899999999
Q ss_pred hhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCC
Q psy13008 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (638)
Q Consensus 245 ~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSi 324 (638)
+++.++++++|+.|||+.+..+|++|++++||+++|+++++++++++|+|||+||++|+|+|++|||||.+|.+++|||+
T Consensus 239 ~~~~~v~~~~a~~LGl~~~~~~n~~da~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~~s~~~~~~~ev~~~~~~~gSS~ 318 (468)
T TIGR00839 239 EYSPLVVKKLAEVTGLPCVPAENLIEATSDCGAYVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSI 318 (468)
T ss_pred hHHHHHHHHHHHHhCCCCCCCccHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceEEeCCCCCCCCCC
Confidence 99999999999999999866779999999999999999999999999999999999999999999999999977999999
Q ss_pred CCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHH
Q psy13008 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (638)
Q Consensus 325 MPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~ 404 (638)
|||||||+.+|.++++|+++.|++.+++....+..++.+..++.+...++++++.+.+++..++..++++|+||++||++
T Consensus 319 MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~vn~erm~~ 398 (468)
T TIGR00839 319 MPAKVNPVVPEVVNQVCFKVIGNDTTVTLAAEAGQLQLNVMEPVIGQAMFESIHILTNACYNLTDKCVNGITANKEICEG 398 (468)
T ss_pred CCCCcCcHHHHHHHHHHHHHHhHHHHHHHHHhcCChHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999865433344554444554456677888999999888888999999999999999
Q ss_pred hhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCC
Q psy13008 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPE 467 (638)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a 467 (638)
|+..+.+++++|++.+||+.||++++++.++|++++|++.+.+.+++++++++|||.+|+++.
T Consensus 399 ~l~~~~~~~~~La~~~g~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~~l~~~ldP~~~v~~~ 461 (468)
T TIGR00839 399 YVFNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLEKGLLTEEELDDIFSVENLMHPA 461 (468)
T ss_pred HHHHhHHHHHHHhhHhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHcCHHHHcCCC
Confidence 999999999999998999999999999999999999999888889999999999999999863
No 10
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-94 Score=746.67 Aligned_cols=464 Identities=45% Similarity=0.747 Sum_probs=452.5
Q ss_pred CCCcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHH
Q psy13008 3 KDGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD 81 (638)
Q Consensus 3 ~~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~ 81 (638)
++++|+|+|.+|+.++|.+.|||++|.|+++||++++.....-+++++++..|++|.|.|+.|+| ||++.+++|.+||+
T Consensus 1 ~~~~R~E~D~lGe~~ip~evYyGI~TlRA~eNF~Is~~~~~~~p~~i~a~~~VKKAaAlaN~elg~l~~~~~~aIv~ACD 80 (471)
T COG1027 1 STDMRIERDLLGEREIPAEVYYGIHTLRAVENFPISGLKISDVPEFIRAMAMVKKAAALANKELGALPKEIADAIVKACD 80 (471)
T ss_pred CCcchhhhhhcccccCcchhhhhhHHHHHHhcCCCcCCcccccHHHHHHHHHHHHHHHHhhhhhCCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999998644458999999999999999999999 99999999999999
Q ss_pred HHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHH
Q psy13008 82 EVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIH 161 (638)
Q Consensus 82 ~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~ 161 (638)
+|.+|++ .++|++|++|+|.|+++|||.||||++++.|++|.+.|.|..+||+||||+++|+||+.+|++|+.+...+.
T Consensus 81 eil~Gk~-~dqFvvD~~QGGAGTS~NMN~NEVIAN~AlE~lG~~KGeY~~~hPndhVNmsQSTND~yPTa~ria~~~~l~ 159 (471)
T COG1027 81 EILDGKC-HDQFVVDVYQGGAGTSTNMNANEVIANRALELLGHEKGEYQYLHPNDHVNMSQSTNDAYPTAFRIAVYKSLR 159 (471)
T ss_pred HHHcCcc-ccccceeccccCCCccccccHHHHHHHHHHHHhcCCCCceeeeCCccccchhhcccccchhHHHHHHHHHHH
Confidence 9999998 899999999999999999999999999999999999999989999999999999999999999999998876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCC
Q psy13008 162 NRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLN 241 (638)
Q Consensus 162 ~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~ 241 (638)
+ |.+.+..|++++..||+++.+++++||||+|+|.|+|+|+.|.+|+..|.||++||.++.+++..+.|||+|+||+.+
T Consensus 160 ~-L~~al~~L~~af~~Ka~EF~~ilKmGRTqLQDAvPmtlGqEF~Afa~~l~ed~~ri~~~~~~l~evNlGgTAiGTGiN 238 (471)
T COG1027 160 K-LIDALEDLIEAFERKAKEFADILKMGRTQLQDAVPMTLGQEFGAFAVALKEDIKRIYRAAELLLEVNLGGTAIGTGIN 238 (471)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhhhhcChhhhcccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCceeeccCcC
Confidence 5 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCC
Q psy13008 242 TYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPG 321 (638)
Q Consensus 242 ~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~G 321 (638)
.++++.+.+.+++++.+|++..+..|.++++++-|.++++.+++..++..|+|||+||||++||||++++|+.+|+.|.|
T Consensus 239 a~~~Y~~~vv~~l~evtg~~~~~A~~Lieatq~~~afv~vsg~lk~~Av~LsKI~NDlRLLsSGPr~Gl~EI~LP~~Q~G 318 (471)
T COG1027 239 APKGYIELVVKKLAEVTGLPLVPAENLIEATQDTGAFVMVSGALKRLAVKLSKICNDLRLLSSGPRAGLNEINLPAVQAG 318 (471)
T ss_pred CChhHHHHHHHHHHHHhCCCCccchhHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccCcccccCCCCCCC
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHH
Q psy13008 322 SSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDT 401 (638)
Q Consensus 322 SSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~er 401 (638)
|||||.|.||+++|.+.+.|..|+|+..++.++...|++|+|+++|++.+.++.|+.++..++..+.++||+|+++|+|+
T Consensus 319 SSIMPgKVNPVipEvvnQvcf~ViGnD~tit~AaeaGQLqLNvmePvI~~~l~~Si~iL~na~~~l~ekcI~gItaN~e~ 398 (471)
T COG1027 319 SSIMPGKVNPVIPEVVNQVCFKVIGNDTTITMAAEAGQLQLNVMEPVIAYALFESISILTNACRNLREKCIDGITANEER 398 (471)
T ss_pred CCCCCCCcCchhHHHHHHHHHHHhcchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCC
Q psy13008 402 IAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEY 468 (638)
Q Consensus 402 m~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~ 468 (638)
|++++..|.+++|.|.+++||+.+..++++|.+.|++++|++.+.+.|++++|+++|+|.....+..
T Consensus 399 C~~~v~nSigivTaLnp~iGy~~~~~iaK~a~~tgksv~evvLe~g~Lteeel~~Il~~~~m~~p~~ 465 (471)
T COG1027 399 CEEYVENSIGIVTALNPYIGYENAAIIAKEALETGKSVREVVLERGLLTEEELDDILSPENMTKPGY 465 (471)
T ss_pred HHHHHHhhhHHHHhhcccccchHHHHHHHHHHHcCCcHHHHHHHhCCCCHHHHHHHhChhhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999988754
No 11
>cd01357 Aspartase Aspartase. This subgroup contains Escherichia coli aspartase (L-aspartate ammonia-lyase), Bacillus aspartase and related proteins. It is a member of the Lyase class I family, which includes both aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid.
Probab=100.00 E-value=4.5e-94 Score=791.29 Aligned_cols=447 Identities=49% Similarity=0.791 Sum_probs=411.4
Q ss_pred ccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHc
Q psy13008 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (638)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~ 85 (638)
|+|+|++|++++|.+.+||.+|+|++.||+++|+ +.|++++++|+++++|||+||.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~t~~~~~~~~~~~~--~~d~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~al~~i~~ 78 (450)
T cd01357 1 RIEHDLLGEREVPADAYYGIQTLRALENFPISGL--KIHPELIRALAMVKKAAALANAELGLLDEEKAEAIVKACDEIIA 78 (450)
T ss_pred CCCcccCCCcCCcccccchHHHHHHHHcCCCCCC--CcCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999985 5899999999999999999999999 999999999999999876
Q ss_pred CccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy13008 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (638)
Q Consensus 86 ~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~ 165 (638)
+.+ .++|+++.++++.++++|+++|++|+.++++.+|++.|+|.++|+|+|||+||||||+++|+++|++|+.+. .+.
T Consensus 79 ~~~-~d~~~~~~~~~~~~~~~~~~~~~vi~~~~~e~~g~~~g~~~~~h~~~~vH~GrSrnD~v~Ta~~L~lr~~l~-~l~ 156 (450)
T cd01357 79 GKL-HDQFVVDVIQGGAGTSTNMNANEVIANRALELLGHEKGEYQYVHPNDHVNMSQSTNDVYPTALRLALILLLR-KLL 156 (450)
T ss_pred ccc-cCCCccchhhccccchhhhhHhHHHHHHHHHHhCccccCCcccCCcccccCCCChHhHHHHHHHHHHHHHHH-HHH
Confidence 544 467888888888899999999999999888889866787666899999999999999999999999999876 599
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCch
Q psy13008 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVG 245 (638)
Q Consensus 166 ~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~ 245 (638)
+.|..++++|.++|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+||+++++++
T Consensus 157 ~~L~~l~~~L~~~A~~~~~t~m~GrTH~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~~~~~~pLGg~AvGt~~~~~~~ 236 (450)
T cd01357 157 DALAALQEAFQAKAREFADVLKMGRTQLQDAVPMTLGQEFGAYATALKRDRARIYKARERLREVNLGGTAIGTGINAPPG 236 (450)
T ss_pred HHHHHHHHHHHHHHHHccCCEeeccccCcccccchHHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceeCCCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999878999999999
Q ss_pred hhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCC
Q psy13008 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIM 325 (638)
Q Consensus 246 ~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSiM 325 (638)
++.++++++|++|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+||+|||||.+|.+++|||||
T Consensus 237 ~~~~v~~~~a~~LGl~~~~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~riA~Di~l~ss~e~~~~gev~~p~~~~GSSiM 316 (450)
T cd01357 237 YIELVVEKLSEITGLPLKRAENLIDATQNTDAFVEVSGALKRLAVKLSKIANDLRLLSSGPRAGLGEINLPAVQPGSSIM 316 (450)
T ss_pred HHHHHHHHHHHHhCCCCccCcCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCceeEECCCCCCcCCCC
Confidence 99999999999999997567799999999999999999999999999999999999999999999999999889999999
Q ss_pred CCCCChhHHHHHHHHHHHHhccHHHHHh--cccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHH
Q psy13008 326 PGKVNPTQVEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (638)
Q Consensus 326 PqKrNP~~lE~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~ 403 (638)
||||||+.+|.|+++|+++.|+..++++ .+.+.+++ ...+.+...++.+++.+.+++..+...++++|+||++||+
T Consensus 317 PqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~v~~erm~ 394 (450)
T cd01357 317 PGKVNPVIPEVVNQVAFQVIGNDLTITMAAEAGQLELN--VFEPVIAYNLLESIDILTNAVRTLRERCIDGITANEERCR 394 (450)
T ss_pred CCCcCcHHHHHHHHHHHHHhhHHHHHHHHHhcCcchhh--cchHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHH
Confidence 9999999999999999999999988855 33333333 3344445667777777776655443699999999999999
Q ss_pred HhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcC
Q psy13008 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVK 459 (638)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llD 459 (638)
+|+..+++++|+|++.+||+.||+++++|.++|++++|++.+.+.|+++||++++|
T Consensus 395 ~~l~~~~~~~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~el~~~~~ 450 (450)
T cd01357 395 EYVENSIGIVTALNPYIGYEAAAEIAKEALETGRSVRELVLEEGLLTEEELDEILS 450 (450)
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999889999999999886
No 12
>cd01362 Fumarase_classII Class II fumarases. This subgroup contains Escherichia coli fumarase C, human mitochondrial fumarase, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=2.5e-92 Score=777.98 Aligned_cols=453 Identities=73% Similarity=1.100 Sum_probs=423.7
Q ss_pred ccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHc
Q psy13008 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (638)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~ 85 (638)
|||+|.+|++++|.+++||.++.|+++||++++.. .+++++++|++||+|||+||+++| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~f~~~~~~--~~~~~i~~~l~ve~A~a~al~~~GiIp~~~a~~I~~al~~i~~ 78 (455)
T cd01362 1 RIEKDSMGEVEVPADALWGAQTQRSLENFPIGGER--MPRELIRALGLLKKAAAQANAELGLLDEEKADAIVQAADEVIA 78 (455)
T ss_pred CCCcccCCCcCCccccchhHHHHHHHhccCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999874 679999999999999999999999 999999999999999865
Q ss_pred CccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy13008 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (638)
Q Consensus 86 ~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~ 165 (638)
... ++.|+.++.+.+.++++|+++|++|+..+.+..|++.|++-++|+++|||+|||||||++|+++|++|+.+.+.+.
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~~~~~~~~~vH~G~SrnDiv~Ta~~L~lr~~l~~~l~ 157 (455)
T cd01362 79 GKL-DDHFPLVVWQTGSGTQTNMNVNEVIANRAIELLGGVLGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAALALQERLL 157 (455)
T ss_pred ccc-ccCCceehhhccccccccccHHHHHHHHHHHhcCcccCCcCcCCccccccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 333 5678888877788999999999999977777778788888678999999999999999999999999998766799
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCch
Q psy13008 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVG 245 (638)
Q Consensus 166 ~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~ 245 (638)
+.|.+++++|.++|++|+||+||||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+|+||+++++++
T Consensus 158 ~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~TfG~~~~~~~~~l~r~~~rL~~~~~r~~~~~lGg~A~Gt~~~~~~~ 237 (455)
T cd01362 158 PALKHLIDALDAKADEFKDIVKIGRTHLQDATPLTLGQEFSGYAAQLEHAIARIEAALPRLYELALGGTAVGTGLNAHPG 237 (455)
T ss_pred HHHHHHHHHHHHHHHHccCCeeeccccCCCCeeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcCCeeccCCccCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999778999999999
Q ss_pred hhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCC
Q psy13008 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIM 325 (638)
Q Consensus 246 ~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSiM 325 (638)
++..+++++|+.|||+.++.+|++|++++||+++++++++++++++|+|||+||++|+|+|++|||||.+|++++|||+|
T Consensus 238 ~~~~v~~~~a~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~l~ria~Dl~~~~s~~~~e~gev~~~~~~~GSS~M 317 (455)
T cd01362 238 FAEKVAAELAELTGLPFVTAPNKFEALAAHDALVEASGALKTLAVSLMKIANDIRWLGSGPRCGLGELSLPENEPGSSIM 317 (455)
T ss_pred HHHHHHHHHHHHhCCCCccCCCHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccCCCceEECCCCCCCCCCC
Confidence 88999999999999997678999999999999999999999999999999999999999989999999999989999999
Q ss_pred CCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHh
Q psy13008 326 PGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKH 405 (638)
Q Consensus 326 PqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~ 405 (638)
||||||+.+|+|+++++++.|.+.+++.....+.++.+.+.+...|.+++.++.+.++++.++..++++|+||++||++|
T Consensus 318 PqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~L~v~~~rm~~~ 397 (455)
T cd01362 318 PGKVNPTQCEALTMVAAQVMGNDAAITIAGSSGNFELNVFKPVIIYNLLQSIRLLADACRSFADKCVAGIEPNRERIAEL 397 (455)
T ss_pred CCCCCcHHHHHHHHHHHHHhhhHHHHHHHHhcCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHH
Confidence 99999999999999999999999999865556666666555655688999999999999988889999999999999999
Q ss_pred hhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCccc
Q psy13008 406 VNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEK 462 (638)
Q Consensus 406 l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~ 462 (638)
+..+++++++|++++||++||++++++.++|.+|+|++.+.+.++++|+++++||.+
T Consensus 398 l~~~~~~~~~La~~ig~~~A~~l~~~a~~~~~~l~~~~~~~~~~~~~el~~~~dp~~ 454 (455)
T cd01362 398 LERSLMLVTALNPHIGYDKAAKIAKKAHKEGLTLKEAALELGYLTEEEFDRLVDPEK 454 (455)
T ss_pred HHhcchhHHHhccccCHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHHHHHHhcCccc
Confidence 999999999999999999999999999999999999998888899999999999976
No 13
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes. This group contains aspartase (L-aspartate ammonia-lyase), fumarase class II enzymes, and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. Aspartase catalyzes the reversible deamination of aspartic acid. Fumarase catalyzes the reversible hydration/dehydration of fumarate to L-malate during the Krebs cycle.
Probab=100.00 E-value=1.1e-88 Score=747.73 Aligned_cols=448 Identities=63% Similarity=0.956 Sum_probs=416.7
Q ss_pred ccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHc
Q psy13008 7 RIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS 85 (638)
Q Consensus 7 r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~ 85 (638)
|+|+|.+|++++|.+.+||.++.+.+.+|++++.. .+++++++|+++|.||++||.+.| ||++++++|.++|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~i~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~i~~ 78 (450)
T cd01596 1 RIEKDSLGEVEVPADAYYGAQTQRALENFPISGER--MPPELIRALALVKKAAALANAELGLLDEEKADAIVQACDEVIA 78 (450)
T ss_pred CCCcccCCCCCCcccccccHhHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999764 789999999999999999999999 999999999999999876
Q ss_pred CccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCC-CCCCChhhHHHHHHHHHHHHHHHHHH
Q psy13008 86 GKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHV-NKCQSSNDTFPTAMHIAVALEIHNRL 164 (638)
Q Consensus 86 ~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~V-h~GrSrnDivdTal~L~lr~~l~~~L 164 (638)
+.. ++.|+.+..+.+.++++|+++|++|+.++.+.+|+..|+| ++|+++|| |+|+|||||++|+++|++|+.+. .+
T Consensus 79 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~~~g~~-~~h~~~~v~h~g~SrnD~v~t~~~L~lr~~l~-~l 155 (450)
T cd01596 79 GKL-DDQFPLDVWQTGSGTSTNMNVNEVIANRALELLGGKKGKY-PVHPNDDVNNSQSSNDDFPPAAHIAAALALLE-RL 155 (450)
T ss_pred Ccc-cCCCcccHHhccCcccccchHHHHHHHHHHHHhccccCCc-ccCCCcccCCCCCCchHHHHHHHHHHHHHHHH-HH
Confidence 444 6778877777778899999999999977767888545665 36988998 79999999999999999999875 59
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCc
Q psy13008 165 LCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYV 244 (638)
Q Consensus 165 ~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~ 244 (638)
.+.|.+++++|.++|++|+|++||||||+|||||||||||+++|+++|.||++||..++++++.+||||||+||++++++
T Consensus 156 ~~~l~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGg~A~Gt~~~~~~ 235 (450)
T cd01596 156 LPALEQLQDALDAKAEEFADIVKIGRTHLQDAVPLTLGQEFSGYAAQLARDIARIEAALERLRELNLGGTAVGTGLNAPP 235 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeeccccccCCeeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcceeCCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987899999999
Q ss_pred hhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCC
Q psy13008 245 GFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSI 324 (638)
Q Consensus 245 ~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSi 324 (638)
+++.++++++|++|||+.++.+|++||+++||+++++++++++++++|+|||+||++|+|+|++|||||.+|++++|||+
T Consensus 236 ~~~~~v~~~~a~~LGl~~~~~~n~~d~~~~rd~~~e~~~~la~~~~~l~ria~Dl~~~ss~~~~e~gev~~~~~~~GSS~ 315 (450)
T cd01596 236 GYAEKVAAELAELTGLPFVTAPNLFEATAAHDALVEVSGALKTLAVSLSKIANDLRLLSSGPRAGLGEINLPANQPGSSI 315 (450)
T ss_pred hHHHHHHHHHHHHhCCCCccCcCHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCeeEECCCCCCCCCC
Confidence 99999999999999999767899999999999999999999999999999999999999988899999999998899999
Q ss_pred CCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHH
Q psy13008 325 MPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAK 404 (638)
Q Consensus 325 MPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~ 404 (638)
|||||||+.+|+|+++++++.|.+.+++....+.+++++...+...+.++++++.+.++++.++..++++|+||++||++
T Consensus 316 MPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~rm~~ 395 (450)
T cd01596 316 MPGKVNPVIPEAVNMVAAQVIGNDTAITMAGSAGQLELNVFKPVIAYNLLQSIRLLANACRSFRDKCVEGIEANEERCKE 395 (450)
T ss_pred CCCCCCCHHHHHHHHHHHHHhccHHHHHHHhhcCcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHH
Confidence 99999999999999999999999999886777777887665555466799999999999998888999999999999999
Q ss_pred hhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcC
Q psy13008 405 HVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVK 459 (638)
Q Consensus 405 ~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llD 459 (638)
|+..+++++|+|++.+||+.||++++++.++|+++.+++.+.+.|+++++++++|
T Consensus 396 ~l~~~~~~~t~LA~~lg~~~a~~~v~~a~~~g~~l~~~~~~~~~~~~~~l~~~~d 450 (450)
T cd01596 396 YVENSLMLVTALNPHIGYEKAAEIAKEALKEGRTLREAALELGLLTEEELDEILD 450 (450)
T ss_pred HHHhCcchHHHHhHHHhHHHHHHHHHHHHHcCCCHHHHHHHhCCCCHHHHHHHhC
Confidence 9999999999999999999999999999999999999998888899999999876
No 14
>KOG1316|consensus
Probab=100.00 E-value=1.4e-87 Score=685.75 Aligned_cols=422 Identities=21% Similarity=0.299 Sum_probs=388.4
Q ss_pred CCCchHhhHH----hhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy13008 22 KYYGAQTVRS----LINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (638)
Q Consensus 22 ~~yg~~~~ra----i~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~ 96 (638)
++||+++..+ +..|+-|.. +|..++.+.++..+|||+++++.| |+.++.++|.+++++|.. +|..++|.+.
T Consensus 7 KlWGGRFtg~~dp~m~~fn~Si~---ydk~ly~~Dv~gSkaya~~L~~~glit~~e~dkil~gLe~i~~-ew~~~kf~~~ 82 (464)
T KOG1316|consen 7 KLWGGRFTGAVDPLMEKFNASIP---YDKRLYEADVDGSKAYAKALEKAGLITEAELDKILKGLEKIRR-EWAAGKFKLN 82 (464)
T ss_pred hhhccccCCCCCHHHHHhhccCc---cchHHHHhhhhhhHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH-HHhcCceEeC
Confidence 6788777665 777876655 899999999999999999999999 999999999999999877 5656777664
Q ss_pred ccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 97 IWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALD 176 (638)
Q Consensus 97 ~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~ 176 (638)
+ ++||+|++ +|++|.|++| +.|+++ |+ ||||||||.|++|||+|+.+.+ +...+..|++++.
T Consensus 83 ---p-~dEDvHta----nErrL~eliG-~~agKl--HT------gRSRNDQV~TDlRLw~r~~i~~-~~~~l~~L~~~~v 144 (464)
T KOG1316|consen 83 ---P-NDEDVHTA----NERRLTELIG-EIAGKL--HT------GRSRNDQVVTDLRLWLRDAIDT-ILGLLWNLIRVLV 144 (464)
T ss_pred ---C-CchhhhhH----HHHHHHHHHh-hhhhhc--cc------CccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 3 68999998 9999999999 688875 76 9999999999999999998765 9999999999999
Q ss_pred HHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHH
Q psy13008 177 KKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRIS 255 (638)
Q Consensus 177 ~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA 255 (638)
++|+.+.|++||||||+|+|||+.|.||+.+++..|.||..||.+++.|+|.+|||+||+ |+++++||.| ++
T Consensus 145 ~rAe~~~dvlmpGYTHLQRAQpvrwsH~LlSha~~l~~D~~Rl~q~~~R~n~~PLGagALAGnpl~iDR~~-------la 217 (464)
T KOG1316|consen 145 DRAEAELDVLMPGYTHLQRAQPVRWSHWLLSHAEQLTRDLGRLVQIRKRLNQLPLGAGALAGNPLGIDREF-------LA 217 (464)
T ss_pred HHHhhccCeeccChhhhhhccCchhHHHHHHHHHHHHhHHHHHHHHHHHhccCCcccchhcCCCCCccHHH-------HH
Confidence 999999999999999999999999999999999999999999999999999999999997 9999999965 89
Q ss_pred HHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHH
Q psy13008 256 ELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQV 334 (638)
Q Consensus 256 ~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~l 334 (638)
+.|||.. ++-|||+++++|||++||++|.++++.||||+|+|+++|+| .|||+|.+.+. .+|||+||||+||+.+
T Consensus 218 ~~LgF~~-v~~NSm~AvsDRDFVvef~fw~sm~m~HlSRlaEdlIiy~t---~EF~Fv~lSDaySTGSSlMPQKKNpDsl 293 (464)
T KOG1316|consen 218 EELGFEG-VIMNSMDAVSDRDFVVEFLFWASMVMTHLSRLAEDLIIYST---KEFGFVTLSDAYSTGSSLMPQKKNPDSL 293 (464)
T ss_pred HhcCCcc-cchhhhhccccchhHHHHHHHHHHHHHHHHHHhhHhheeec---cccCceeeccccccCcccCCCCCCCCHH
Confidence 9999998 79999999999999999999999999999999999999998 69999999986 8999999999999999
Q ss_pred HHHHHHHHHHhccHHHHH--hcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhH
Q psy13008 335 EALTMVAAQVMGNHVAVT--VGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML 412 (638)
Q Consensus 335 E~ir~~a~~v~G~~~~~~--~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~l 412 (638)
|++|+++++|+|.+++++ .+|.++.|+.+.+++ ++.+|++.+++.+.+. ++++++++|+||+|+|++.|.. .|+
T Consensus 294 ELlRgksgrV~gdl~g~lmt~KG~PstYnkDlQeD--Kep~Fds~~tv~~~l~-v~tgv~stltvn~e~m~~aLt~-dml 369 (464)
T KOG1316|consen 294 ELLRGKSGRVFGDLTGLLMTLKGLPSTYNKDLQED--KEPLFDSSKTVSDSLQ-VATGVISTLTVNQENMEKALTP-DML 369 (464)
T ss_pred HHhccccceehhhhHHHHHHhcCCccccccchhhh--hhHHHhhHHHHHHHHH-HHHHHhhheeECHHHHhhccCc-hhh
Confidence 999999999999999997 479999999998877 5889999999997655 7779999999999999999986 799
Q ss_pred HHhcCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccch
Q psy13008 413 VTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHT 483 (638)
Q Consensus 413 at~La~-----~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~ 483 (638)
||+||+ ++|||++|+|++ .|+++|.++.+ ||.+|++++ +|.|++||.+ +|+|
T Consensus 370 ATdlA~YLVrKGvPFRqtHhisG~~V~~ae~rg~~l~~-------Lsledlqkl-----------splF~eDv~~-v~~y 430 (464)
T KOG1316|consen 370 ATDLAYYLVRKGVPFRQTHHISGKAVRMAEERGVTLDK-------LSLEDLQKL-----------SPLFEEDVFC-VFNY 430 (464)
T ss_pred HhHHHHHHHHcCCCchhhhhhhHHHHHHHHHcCCCccc-------CCHHHHhhc-----------CcccccchHH-hhch
Confidence 999985 589999999975 46788998875 999999998 9999999999 9999
Q ss_pred hhHHHHHhhhcCCCCC
Q psy13008 484 EKVISQQILAAKVLPP 499 (638)
Q Consensus 484 ~~~v~~~~~~~~~~~~ 499 (638)
|+|||||.+.|||+-.
T Consensus 431 e~sVek~~a~GgTa~s 446 (464)
T KOG1316|consen 431 ENSVEKRCAIGGTAKS 446 (464)
T ss_pred hhhHHHhhccCCchHH
Confidence 9999999999999643
No 15
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-86 Score=712.16 Aligned_cols=436 Identities=23% Similarity=0.347 Sum_probs=391.1
Q ss_pred CCCchHhhHH----hhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccc
Q psy13008 22 KYYGAQTVRS----LINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLS 96 (638)
Q Consensus 22 ~~yg~~~~ra----i~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~ 96 (638)
.+||+++.+. +..|+.+.. .|..++...+.+..||+.+|.+.| |+++++++|.+++.++.++ +..++|..+
T Consensus 4 ~lwggRf~~~~~~~~~~~~~Si~---~D~~l~~~di~~s~AH~~mL~~~Gii~~ee~~~I~~~L~~l~~e-~~~g~~~~~ 79 (459)
T COG0165 4 KLWGGRFSGGPDPLVKEFNASIS---FDKRLAEYDIAGSIAHAKMLAKQGIITEEEAAKILEGLEELLEE-IRAGKFELD 79 (459)
T ss_pred CCCCCCccCCCcHHHHHHhccch---hHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH-HhcCCccCC
Confidence 3555443333 566776654 799999999999999999999999 9999999999999998762 224456554
Q ss_pred ccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 97 IWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALD 176 (638)
Q Consensus 97 ~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~ 176 (638)
...||+|++ ||++|++++| +.|||+ |+ ||||||||+|+++||+|+++.+ |...+..|+++|+
T Consensus 80 ----~~~EDvH~a----iE~~L~~~iG-~~ggkL--ht------gRSRNDQVatd~rL~lr~~~~~-l~~~i~~l~~aL~ 141 (459)
T COG0165 80 ----PDDEDVHTA----IEARLIERIG-DVGGKL--HT------GRSRNDQVATDLRLWLRDKLLE-LLELIRILQKALL 141 (459)
T ss_pred ----CccccHHHH----HHHHHHHHHh-hhhchh--cc------ccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 267998888 9999999999 788875 66 9999999999999999999876 9999999999999
Q ss_pred HHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHH
Q psy13008 177 KKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRIS 255 (638)
Q Consensus 177 ~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA 255 (638)
++|++|.+++||||||+|+|||+|||||+++|+++|.||++||.++++|+|.+|||+||. ||++++||+ ++|
T Consensus 142 ~~Ae~~~~~imPGyTHlQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~-------~tA 214 (459)
T COG0165 142 DLAEEHAETVMPGYTHLQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRE-------RTA 214 (459)
T ss_pred HHHHHccCCccCCcccccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHH-------HHH
Confidence 999999999999999999999999999999999999999999999999999999999997 999999985 699
Q ss_pred HHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHH
Q psy13008 256 ELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQV 334 (638)
Q Consensus 256 ~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~l 334 (638)
++|||+. +..|++|++++|||++|+++++++++.+|||||+||++|+| .|||+|++|+. ++||||||||||||.+
T Consensus 215 ~lLGF~~-~~~Nsldavs~Rdf~le~l~~~s~~~~~LSRlaedlI~wss---~EfgfI~l~D~~sTGSSIMPQKKNPD~~ 290 (459)
T COG0165 215 ELLGFDA-VTRNSLDAVSDRDFILEFLSAAALIMVHLSRLAEDLILWSS---PEFGFIELPDEFSTGSSIMPQKKNPDVL 290 (459)
T ss_pred HHcCCch-hhcCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---ccCceEeCCcccccccccCCCCCCCcHH
Confidence 9999997 79999999999999999999999999999999999999998 59999999987 8999999999999999
Q ss_pred HHHHHHHHHHhccHHHHH--hcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhH
Q psy13008 335 EALTMVAAQVMGNHVAVT--VGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML 412 (638)
Q Consensus 335 E~ir~~a~~v~G~~~~~~--~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~l 412 (638)
|+||++++++.|++.+++ +++.+..|++|.+++ ...++++++.+.+++. .+..++++|+||+|+|++.+..++++
T Consensus 291 ELiRgk~grv~G~l~~ll~~~k~lPlaYnrDlQed--ke~lfds~~t~~~~l~-~~~~mv~~l~vn~e~~~~a~~~gfs~ 367 (459)
T COG0165 291 ELIRGKAGRVIGALTGLLTIMKGLPLAYNRDLQED--KEPLFDSVDTLEDSLR-VLAGMVSGLTVNKERMREAAEAGFST 367 (459)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhcCcccccHHHHhh--hHHHHHHHHHHHHHHH-HHHHHHccCeeCHHHHHHHhhcccch
Confidence 999999999999999987 577788888887655 5789999999987755 66699999999999999999999999
Q ss_pred HHhcCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccch
Q psy13008 413 VTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHT 483 (638)
Q Consensus 413 at~La~-----~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~ 483 (638)
+|+||+ ++|||+||++++ ++.+.|+++.+ ++.++++.+ ++.+.+||.+ +.++
T Consensus 368 aTdlAd~lv~kGvPFReAh~ivG~~v~~~~~~~~~l~~-------l~~~~~~~~-----------~~~~~~dv~~-~l~~ 428 (459)
T COG0165 368 ATDLADYLVRKGVPFREAHEIVGEAVRRAEERGKDLAD-------LSLEELQSI-----------SPLIDEDVYE-VLTP 428 (459)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCCHHh-------ccHHHHhhh-----------ccccchHHHH-Hhch
Confidence 998874 699999999876 45677888776 899999976 7899999999 9999
Q ss_pred hhHHHHHhhhcCCCCCCCCCCchhhhhcc
Q psy13008 484 EKVISQQILAAKVLPPWSRPSCPQARSII 512 (638)
Q Consensus 484 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (638)
+.+|+.+...||++|+.++.....+++.+
T Consensus 429 ~~~v~~R~~~Ggtap~~v~~~i~~~~~~l 457 (459)
T COG0165 429 EESVAKRNSEGGTAPEEVREAIARAKARL 457 (459)
T ss_pred HHHHHHhhccCCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999888777777654
No 16
>KOG1317|consensus
Probab=100.00 E-value=1.2e-83 Score=652.07 Aligned_cols=461 Identities=77% Similarity=1.147 Sum_probs=452.2
Q ss_pred CCcccccccCCccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Q psy13008 4 DGVRIEKDSFGELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFGLDSKIADTISKAADEV 83 (638)
Q Consensus 4 ~~~r~e~d~~g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~GI~~e~a~~I~~al~~i 83 (638)
+..|+|+|.+|++++|.|+|||.||+|...||.+||..++.|...++++.-+++|.|..+.+.|+++..+++|.++++++
T Consensus 26 ~~fR~E~DtfGe~~VP~DkyyGAQT~Rs~~NF~IGg~~ERMP~pii~AfGiLKkaaA~vN~~~GLDpkis~Ai~~AadeV 105 (487)
T KOG1317|consen 26 SSFRTERDTFGEIEVPADKYYGAQTQRSLQNFKIGGERERMPEPIIQAFGILKKAAAEVNQEYGLDPKISKAISQAADEV 105 (487)
T ss_pred cchhhhccccCcccccchhhhhHHHHHHhhccccCCccccCchHHHHHHHHHHHHHHHHhHhhCCChHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH
Q psy13008 84 ISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR 163 (638)
Q Consensus 84 ~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~ 163 (638)
.+|++ +++||+..||+++|++.|||.||||.+|++|++|++.|.+. +|||+|||..+||||.++|++.+..-.++...
T Consensus 106 ~~GKL-~dhFPLvvwQTGSGTQsNMN~NEVIsNrAieilGg~~GsK~-VHPNdHvN~SQSSNDTFPtamHIa~~~ei~~~ 183 (487)
T KOG1317|consen 106 ASGKL-NDHFPLVVWQTGSGTQSNMNANEVISNRAIEILGGKLGSKK-VHPNDHVNKSQSSNDTFPTAMHIAAATEINSR 183 (487)
T ss_pred hcCcc-cccCceeEEecCCCccccCcHHHHHHHHHHHHhcccccCcc-cCCccccccccccCCccchHHHHHHHHHHHHh
Confidence 99998 88999999999999999999999999999999999999996 99999999999999999999999998888889
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCC
Q psy13008 164 LLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY 243 (638)
Q Consensus 164 L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d 243 (638)
|++.|..|.++|..++.+++|++.+||||.|+|.|.|+|+.|++|++.+...++|+..+..|+.....||+||||+++.-
T Consensus 184 L~P~l~~L~~aL~aKs~EfkdIiKIGRTHtqDAvPLTLGQEFsgY~qQ~~ngl~Rv~~~lpr~y~LA~GGTAVGTGLNTr 263 (487)
T KOG1317|consen 184 LIPALTNLRDALEAKSKEFKDIIKIGRTHTQDAVPLTLGQEFSGYVQQVTNGLQRVAATLPRLYQLAQGGTAVGTGLNTR 263 (487)
T ss_pred hhHHHHHHHHHHHhhhHHHHHHHHhcccccccccccchhhhhhhHHHHHHHHHHHHHhhhhHHHHHhcCCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCC
Q psy13008 244 VGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSS 323 (638)
Q Consensus 244 ~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSS 323 (638)
++|.+++.++++++.||++...+|-+.+.+.||..+|+..+|..++.+|-||++||+++.||||.++||+.+|+...|||
T Consensus 264 ~GFaeK~a~~va~ltgLpFvtApNkFEALAahDA~VE~~GalNt~A~SlmKianDIRfLGSGPRcGlgEL~LPENEPGSS 343 (487)
T KOG1317|consen 264 KGFAEKIAARVAELTGLPFVTAPNKFEALAAHDAMVEVSGALNTIAVSLMKIANDIRFLGSGPRCGLGELMLPENEPGSS 343 (487)
T ss_pred ccHHHHHHHHHHHHhCCCceecccHHHHHHhhhhHHHhcccHHHHHHHHHHHhhhhhhccCCCCCCccccccCCCCCCcc
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHH
Q psy13008 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (638)
Q Consensus 324 iMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~ 403 (638)
|||.|.||..||.+...|.+|+|+..++...|.++.||+++++|++..+++.++.+++|+...+...|+.||+.|+||+.
T Consensus 344 IMPGKVNPTQcEamTmvcaQVMGN~vAvtvgGsnGhFELNVFKP~i~~nvL~SirLl~D~~~sF~~nCV~GI~aN~erI~ 423 (487)
T KOG1317|consen 344 IMPGKVNPTQCEAMTMVCAQVMGNHVAVTVGGSNGHFELNVFKPLIASNVLHSIRLLADASVSFTKNCVVGIEANKERIA 423 (487)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCceEEEecccCceeEEecchHHHHHHHHHHHHHhhhhhhhhhhhhhhcccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy13008 404 KHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 404 ~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~ 466 (638)
+.+.++.|++|+|.++|||+.|..|++.|.++|.+|.+...+.|.++++++++...|+.++|+
T Consensus 424 kll~eSLMLVTALNPhIGYD~aAkiAKtAhKng~TLk~eal~lG~lTeeqFdewV~Pe~Mlgp 486 (487)
T KOG1317|consen 424 KLLNESLMLVTALNPHIGYDNAAKIAKTAHKNGTTLKEEALKLGVLTEEQFDEWVVPEKMLGP 486 (487)
T ss_pred HHHHhhhhhhhccCCccCchhHHHHHHHHhhcCCcHHHHHHHhcCCCHHHHHhhhCHHhccCC
Confidence 999999999999999999999999999999999999999999999999999999999999996
No 17
>PLN02646 argininosuccinate lyase
Probab=100.00 E-value=1.3e-78 Score=671.54 Aligned_cols=428 Identities=21% Similarity=0.252 Sum_probs=372.0
Q ss_pred hHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCccccc
Q psy13008 29 VRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTN 107 (638)
Q Consensus 29 ~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~ 107 (638)
-..+..|+-+-. .|..++...+.+.+||++||.+.| ||++++++|.++|+++.++.. +++|+++ . ..||+|
T Consensus 28 ~~~~~~~~~s~~---~d~~l~~~di~~~~Aha~~L~~~Gii~~~~a~~I~~al~~i~~~~~-~~~f~~~---~-~~ed~h 99 (474)
T PLN02646 28 TPAVEKFNESIS---FDKRLYKEDIMGSKAHASMLAKQGIITDEDRDSILDGLDEIEKEIE-AGKFEWR---P-DREDVH 99 (474)
T ss_pred cHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cCCCcCC---C-CCCchH
Confidence 333555654433 688999999999999999999999 999999999999999977443 5677653 3 358999
Q ss_pred chhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q psy13008 108 MNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIK 187 (638)
Q Consensus 108 ~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m 187 (638)
|+ ||+++++++| +.|++ ||+|||||||++|+++|++|+.+. .|.+.|.+|+++|.++|++|+|++|
T Consensus 100 ~~----iE~~L~e~~G-~~g~~--------lH~grSrND~v~Ta~~L~lr~~l~-~l~~~L~~L~~~L~~~A~~~~dtvm 165 (474)
T PLN02646 100 MN----NEARLTELIG-EPAKK--------LHTARSRNDQVATDTRLWCRDAID-VIRKRIKTLQVALVELAEKNVDLVV 165 (474)
T ss_pred HH----HHHHHHHHhc-hhhCc--------ccCCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 99 8999999998 56654 456999999999999999999876 5999999999999999999999999
Q ss_pred ccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHcCCCCCCCC
Q psy13008 188 IGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAP 266 (638)
Q Consensus 188 ~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ 266 (638)
|||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+ ||++++|++ ++|++|||.. +..
T Consensus 166 pGrTHlQ~AqPiT~G~~l~~~~~~l~rd~~RL~~~~~r~~~~pLGgga~aGt~~~idr~-------~~A~~LGf~~-~~~ 237 (474)
T PLN02646 166 PGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLGSCALAGTGLPIDRF-------MTAKDLGFTA-PMR 237 (474)
T ss_pred ecccCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhcCCCCCCCHH-------HHHHHhCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999997 999998874 6999999986 788
Q ss_pred CchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHh
Q psy13008 267 NKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVM 345 (638)
Q Consensus 267 ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~ 345 (638)
|++|++++||+++|+++++++++++|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|++|++|+++.
T Consensus 238 n~~da~~~RD~~~e~~~~la~ia~~LsRia~Dl~l~ss---~e~g~v~~~d~~~~GSSiMPqKrNP~~~E~ir~~a~~v~ 314 (474)
T PLN02646 238 NSIDAVSDRDFVLEFLFANSITAIHLSRLGEEWVLWAS---EEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVI 314 (474)
T ss_pred ChHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeeCCCCCCCcCCCCCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 58999999974 899999999999999999999999999
Q ss_pred ccHHHHHh--cccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHhcC-----C
Q psy13008 346 GNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN-----P 418 (638)
Q Consensus 346 G~~~~~~~--~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La-----~ 418 (638)
|++.+++. .+.+..|+++.+.. ...+++++..+.++ +..+..++++|+||++||++++..+++++|+++ .
T Consensus 315 G~~~~~~~~~~~~p~~~~rD~q~~--~~~l~~~~~~~~~~-l~~~~~~l~~l~v~~~rm~~~l~~~~~~At~la~~Lv~~ 391 (474)
T PLN02646 315 GDLVTVLALCKGLPTAYNRDLQED--KEPLFDSVDTVSDM-LEVATEFAQNITFNPERIKKSLPAGMLDATTLADYLVRK 391 (474)
T ss_pred hhhHHHHHHhcCCchHhhcchhhH--HHHHHHHHHHHHHH-HHHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHc
Confidence 99988863 55666777776433 24466666666655 456668999999999999999999998888765 3
Q ss_pred CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhhHHHHHhhhc
Q psy13008 419 HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAA 494 (638)
Q Consensus 419 ~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~~v~~~~~~~ 494 (638)
++|||+||++|+ .+.++|+++.| ++.++++.+ .+.+.+||.. +++++++|+.+...|
T Consensus 392 Gi~fr~Ah~iV~~~v~~a~~~g~~l~~-------l~~~~~~~~-----------~~~~~~~~~~-~l~~~~~v~~r~~~G 452 (474)
T PLN02646 392 GVPFRETHHIVGAAVALAESKGCELSD-------LTLEDLKSI-----------NPVFEEDVYE-VLGVENSVEKFDSYG 452 (474)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCHHH-------HHHHHHHHh-----------cccchHHHHH-hCCHHHHHHHccCCC
Confidence 699999999876 46788999988 666778775 3347888998 999999999999999
Q ss_pred CCCCCCCCCCchhhhhc
Q psy13008 495 KVLPPWSRPSCPQARSI 511 (638)
Q Consensus 495 ~~~~~~~~~~~~~~~~~ 511 (638)
|+.|..+.-...++++.
T Consensus 453 g~~p~~v~~~~~~~~~~ 469 (474)
T PLN02646 453 STGSRSVLEQLEKWRTK 469 (474)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999988777777765
No 18
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=8.1e-78 Score=663.92 Aligned_cols=414 Identities=22% Similarity=0.289 Sum_probs=359.5
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~ 98 (638)
++.+||..+|+++| ++++++++|++||+|+|++|+++| ||++.+++|.++|++ +.|+++.+
T Consensus 8 ~~~~~~~~~~~~i~----------s~~~~i~a~l~ve~A~A~a~~~~G~ip~~~a~~I~~a~~~--------~~~d~~~~ 69 (452)
T PRK09053 8 TDLYFGSPAMRAIF----------SDRATVQRMLDFEAALARAEAACGVIPAAAVAPIEAACDA--------ERLDLDAL 69 (452)
T ss_pred hhhhcCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhccc--------cCCCHHHH
Confidence 45699999999999 899999999999999999999999 999999999999864 12455555
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
+.+.++.-|.. .+.+ +.+.+.+| . .+.|+++|||+|+||||++||+++|++|+.+. .+.+.|..++++|.++
T Consensus 70 ~~~~~~~~~~~-~~lv-~~l~~~~~----~-~~~~~~~~vH~G~SsnDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 141 (452)
T PRK09053 70 AQAAALAGNLA-IPLV-KQLTAQVA----A-RDAEAARYVHWGATSQDIIDTGLVLQLRDALD-LLEPDLDRLCDALATL 141 (452)
T ss_pred HHHHhhcCCch-HHHH-HHHHHHhc----c-cCcchhccccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 66666665543 2211 12334444 1 12488999999999999999999999999874 6999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||+ +..++++..+++++|+.|
T Consensus 142 A~~~~~t~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~~~~~~~lGga-vGt~-~~~~~~~~~v~~~~a~~L 219 (452)
T PRK09053 142 AARHRATPMVGRTWLQQALPVTLGLKFAGWLDALLRHRQRLAALRPRALVLQFGGA-AGTL-ASLGEQALPVAQALAAEL 219 (452)
T ss_pred HHHccCCeeehhccCCcceechHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccch-hhcc-cccccchHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999997 6994 445667788899999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ 336 (638)
||+.+..+ |+++||+++++++++++++++|+|||+||++|++ +|||||.+|. +++|||||||||||+.+|.
T Consensus 220 Gl~~~~~~----~~~~rD~~~e~~~~la~la~~L~kia~Di~ll~~---~e~gev~e~~~~~~~GSSiMP~KrNPv~~E~ 292 (452)
T PRK09053 220 QLALPALP----WHTQRDRIAEFASALGLLAGTLGKIARDVSLLMQ---TEVGEVFEPAAAGKGGSSTMPHKRNPVGCAA 292 (452)
T ss_pred CCCCCCCC----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhhccccCCCCCcCCCCCCCCchHHHH
Confidence 99975433 4799999999999999999999999999999994 7999998875 4799999999999999999
Q ss_pred HHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHH---
Q psy13008 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV--- 413 (638)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~la--- 413 (638)
++++|+++.|+..++ +.+..++++++...+.+.|..++.+..+.+.++..+..++++|+||++||++|++.+.+++
T Consensus 293 i~~~a~~v~g~~~~~-~~~~~~~~erd~~~~~~~~~~l~~~~~~~~~al~~~~~~l~~l~v~~erm~~~l~~s~~~~~ae 371 (452)
T PRK09053 293 VLTAATRAPGLVATL-FAAMPQEHERALGGWHAEWDTLPELACLAAGALAQMAQIVEGLEVDAARMRANLDLTHGLILAE 371 (452)
T ss_pred HHHHHHHHHHHHHHH-HHhChhhhcccCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhcCCHHHHH
Confidence 999999999999887 5566788999987777778777777777777787888999999999999999998877654
Q ss_pred ---HhcCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 414 ---TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 414 ---t~La~~ig~~~Ah~iv----~~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
+.|++.+||++||+++ +++.++|++|+|++.+. +.|++++++++|||.+|+|.+..
T Consensus 372 ~~~~~La~~lgr~~Ah~iV~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~l~P~~~~g~~~~ 438 (452)
T PRK09053 372 AVMLALADRIGRLDAHHLVEQASKRAVAEGRHLRDVLAEDPQVSAHLSPAALDRLLDPAHYLGQAHA 438 (452)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHCCCHHHHHHhChhhhccCCHHHHHHHcCHHHHhcchHH
Confidence 7899999999999995 56788999999998875 67999999999999999998764
No 19
>PRK00855 argininosuccinate lyase; Provisional
Probab=100.00 E-value=1.3e-75 Score=647.40 Aligned_cols=435 Identities=22% Similarity=0.318 Sum_probs=374.4
Q ss_pred CCCCchH----hhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccc
Q psy13008 21 DKYYGAQ----TVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPL 95 (638)
Q Consensus 21 ~~~yg~~----~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~ 95 (638)
+.+||.+ +.+++.+|+++-. .|.+++.+++.+++||+.||.+.| ||++++++|.++|+++.++.. ++.|++
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~s~~---~~~~~~~~~~~~~~Aha~~l~~~G~l~~~~a~~i~~al~~i~~~~~-~~~~~~ 79 (459)
T PRK00855 4 NKLWGGRFSEGPDELVERFTASIS---FDKRLAEEDIAGSIAHARMLAKQGILSEEEAEKILAGLDEILEEIE-AGKFEF 79 (459)
T ss_pred ccccccCCCcchHHHHHHcccCcc---chHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhcc-cCCccc
Confidence 4688877 8999999998844 789999999999999999999999 999999999999999987543 567777
Q ss_pred cccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 96 SIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDAL 175 (638)
Q Consensus 96 ~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL 175 (638)
++ .+||+|++ ||+++++.+| +.|+ +||+||||||+++|+++|++|+.+. .+.+.|.+++++|
T Consensus 80 ~~----~~~d~~~~----ie~~l~~~~g-~~g~--------~iH~g~SrnD~~~Ta~~L~~r~~l~-~l~~~L~~l~~~L 141 (459)
T PRK00855 80 SP----ELEDIHMA----IEARLTERIG-DVGG--------KLHTGRSRNDQVATDLRLYLRDEID-EIAELLLELQKAL 141 (459)
T ss_pred CC----CCCcHHHH----HHHHHHHHhc-cccC--------cccCCCCHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 63 67998888 9999999998 5555 3556999999999999999999876 5999999999999
Q ss_pred HHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHH
Q psy13008 176 DKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRI 254 (638)
Q Consensus 176 ~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~l 254 (638)
.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+|+ ||+++++++ ++
T Consensus 142 ~~~A~~~~~t~m~GrTH~Q~A~P~T~G~~l~~~~~~L~r~~~rL~~~~~~~~~~plGgaag~gt~~~~~r~-------~~ 214 (459)
T PRK00855 142 LDLAEEHADTIMPGYTHLQRAQPVTFGHHLLAYAEMLARDLERLRDARKRVNRSPLGSAALAGTTFPIDRE-------RT 214 (459)
T ss_pred HHHHHHcCCCEeecCcCCccceeecHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhcCCCCCcCHH-------HH
Confidence 9999999999999999999999999999999999999999999999999999999999987 898888774 69
Q ss_pred HHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhH
Q psy13008 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQ 333 (638)
Q Consensus 255 A~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~ 333 (638)
+++|||+. +..|++||+++||++++++++++.++++|+|||+||++|+| .|||||.+|+. ++|||||||||||+.
T Consensus 215 a~~LG~~~-~~~n~~~a~~~rd~~~e~~~~l~~la~~L~ria~Dl~l~ss---~e~gei~~p~~~~~gSSiMPqK~NP~~ 290 (459)
T PRK00855 215 AELLGFDG-VTENSLDAVSDRDFALEFLSAASLLMVHLSRLAEELILWSS---QEFGFVELPDAFSTGSSIMPQKKNPDV 290 (459)
T ss_pred HHHcCCCC-CCCCHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---cCCCeEeCCCCCCCCcCCCCCCCCCHH
Confidence 99999997 78999999999999999999999999999999999999997 58999999986 699999999999999
Q ss_pred HHHHHHHHHHHhccHHHHHh--cccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhh
Q psy13008 334 VEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (638)
Q Consensus 334 lE~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~ 411 (638)
+|.++++|+++.|+..+++. ...+..++++.+.. ...+++++..+.++ +..+..++++|+||+++|++++..+++
T Consensus 291 ~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~rD~~~~--~~~l~~~~~~~~~a-l~~~~~~l~~l~v~~~~m~~~l~~~~~ 367 (459)
T PRK00855 291 AELIRGKTGRVYGNLTGLLTVMKGLPLAYNRDLQED--KEPLFDAVDTLKLS-LEAMAGMLETLTVNKERMREAAGKGFS 367 (459)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhcCchHHhhhhhhhh--HHHHHHHHHHHHHH-HHHHHHHHccCEECHHHHHHHHHcchh
Confidence 99999999999999988874 34444566654332 23355566666555 445667999999999999999999999
Q ss_pred HHHhcCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccc
Q psy13008 412 LVTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFH 482 (638)
Q Consensus 412 lat~La~-----~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~ 482 (638)
++|++++ ++|||+||++++ ++.++|+++.+ +..++++.+ .+...+|+.. +.+
T Consensus 368 ~at~la~~Lv~~gi~~r~Ah~~v~~~~~~a~~~g~~~~~-------~~~~~~~~~-----------~~~~~~~~~~-~~~ 428 (459)
T PRK00855 368 TATDLADYLVRKGVPFREAHEIVGKAVREAEERGVDLAD-------LSLEELQAF-----------SPLITEDVYE-VLT 428 (459)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHH-------HhHHHHHHh-----------cccchHHHHH-HhC
Confidence 8887643 699999999864 56788999998 444455554 2224667777 899
Q ss_pred hhhHHHHHhhhcCCCCCCCCCCchhhhh
Q psy13008 483 TEKVISQQILAAKVLPPWSRPSCPQARS 510 (638)
Q Consensus 483 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 510 (638)
.+++|+.+...||..|....-...+++.
T Consensus 429 ~~~~v~~r~~~Gg~~~~~~~~~~~~~~~ 456 (459)
T PRK00855 429 PEGSVAARNSIGGTAPEQVREQIARAKA 456 (459)
T ss_pred hHHHHHhcCCCCCCCHHHHHHHHHHHHh
Confidence 9999999999999999877666555544
No 20
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like. This subgroup contains pCLME and related proteins, and belongs to the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=2.5e-75 Score=642.17 Aligned_cols=411 Identities=23% Similarity=0.292 Sum_probs=347.8
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~ 98 (638)
++++||..+|+.+| ++++++++|++||.||++||.+.| ||++++++|.++++++ +.+. +.+
T Consensus 2 ~~~~y~~~~~~~~~----------s~~~~i~~~~~ve~A~a~~l~~~Gii~~~~a~~I~~al~~~-~~~~-------~~~ 63 (437)
T cd01597 2 LGDLFGTPAMREIF----------SDENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADVE-RLDL-------EAL 63 (437)
T ss_pred CccccCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccc-CCCH-------HHH
Confidence 45799999999999 899999999999999999999999 9999999999998765 1111 111
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
..+.+++.|.. ..++..+.+.+|++.|+ +||+||||||+++|+++|++|+.+. .+.+.|..|+++|.++
T Consensus 64 ~~~~~~~~~~v--~a~e~~l~e~~g~~~g~--------~lH~grSrnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 132 (437)
T cd01597 64 AEATARTGHPA--IPLVKQLTAACGDAAGE--------YVHWGATTQDIIDTALVLQLRDALD-LLERDLDALLDALARL 132 (437)
T ss_pred HHHHHHhCCCc--HHHHHHHHHHcCccccC--------eeecCccHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 11123333321 12676777888855454 4567999999999999999999976 5999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+|++||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||+.+. +.++..+++++++.|
T Consensus 133 A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGga-~Gtg~~~-~~~~~~~~~~~a~~L 210 (437)
T cd01597 133 AATHRDTPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGGA-AGTLASL-GDQGLAVQEALAAEL 210 (437)
T ss_pred HHHhcCCeeehhhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccc-ccccccc-CCcHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999996 5776543 445667889999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ 336 (638)
||+.+. .+ |+++||++++++++++.++++|+|||+||++|++ +|||||.+|+ .++|||||||||||+.+|.
T Consensus 211 Gf~~~~-~~---~~~~rd~~~e~~~~l~~~a~~l~rla~Dl~l~s~---~e~gel~~~~~~~~~GSSiMPqK~NP~~~E~ 283 (437)
T cd01597 211 GLGVPA-IP---WHTARDRIAELASFLALLTGTLGKIARDVYLLMQ---TEIGEVAEPFAKGRGGSSTMPHKRNPVGCEL 283 (437)
T ss_pred CCCCCC-Cc---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceeecccCCCCCCCCCCCCCcCcHHHHH
Confidence 999843 33 6899999999999999999999999999999996 6999999997 6999999999999999999
Q ss_pred HHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHH---
Q psy13008 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLV--- 413 (638)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~la--- 413 (638)
++++|+++.|+..+++. ...+++++|...+...+..++....+...++.++..++++|+||++||++++..++++.
T Consensus 284 i~~~a~~~~g~~~~~~~-~~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~ae 362 (437)
T cd01597 284 IVALARRVPGLAALLLD-AMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSE 362 (437)
T ss_pred HHHHHHHHHHHHHHHHH-hchhhcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHH
Confidence 99999999999766543 44477888876665567777666666667777999999999999999999998766543
Q ss_pred ---HhcCCCCCHHHHHHHH----HHHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 414 ---TALNPHIGYDKAAEIA----KHAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 414 ---t~La~~ig~~~Ah~iv----~~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
+.|++++||++||+++ +++.++|+++++.+.+. +.|+++++++++||.+|+|+++.
T Consensus 363 ~l~~~l~~~i~~~~Ah~~v~~~~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~v~~a~~ 429 (437)
T cd01597 363 AVMMALAPKLGRQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYLGSAPA 429 (437)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHhcCHHHHhcchHH
Confidence 2567789999999985 45778899999988865 56899999999999999996653
No 21
>PRK08540 adenylosuccinate lyase; Reviewed
Probab=100.00 E-value=1.4e-75 Score=645.95 Aligned_cols=412 Identities=26% Similarity=0.327 Sum_probs=353.0
Q ss_pred cCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH--HHcCccccCCcc
Q psy13008 18 VPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADE--VISGKLYEDHFP 94 (638)
Q Consensus 18 ~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~--i~~~~~~~~~f~ 94 (638)
.|++.+||+.+|+++| +|++++++|++||.||++||.+.| ||++++++|.++|.+ +..... ....
T Consensus 4 ~~~~~~~~~~~~~~~~----------s~~~~~~~~l~ve~A~a~~l~~~Giip~~~a~~I~~~l~~~~i~~~~~--~~~~ 71 (449)
T PRK08540 4 HPIDYRYGTPEMKRVW----------SEENKLQKMLDVEAALARAEAELGLIPEEAAEEINRKASTKYVKLERV--KEIE 71 (449)
T ss_pred CCcCcccCCHHHHHHc----------ChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccCCHHHH--HHHH
Confidence 6999999999999999 899999999999999999999999 999999999999876 421111 0000
Q ss_pred ccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 95 LSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (638)
Q Consensus 95 ~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~a 174 (638)
...++|+ ++ +++.|.+.+|++.|+ |||+|||||||++|+++|++|+.+. .+.+.|..++++
T Consensus 72 -----~~~~~~v-~~----~e~~L~~~~~~~~~~--------~vH~g~S~nDi~~Ta~~L~lr~~l~-~l~~~L~~l~~~ 132 (449)
T PRK08540 72 -----AEIHHDI-MA----VVKALSEVCEGDAGE--------YVHFGATSNDIIDTATALQLKDSLE-ILEEKLKKLRGV 132 (449)
T ss_pred -----HHhCCCc-HH----HHHHHHHHhhhhhhc--------ceecCccHhhHHhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1123443 45 788888888645554 5667999999999999999999875 599999999999
Q ss_pred HHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHH
Q psy13008 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (638)
Q Consensus 175 L~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (638)
|.++|++|+|++||||||+|||||||||||+++|+++|.||++||.+++++++.+|||| |+||+.+. ++++..+.+++
T Consensus 133 L~~~A~~~~~~~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGg-avGt~~a~-~~~~~~i~~~~ 210 (449)
T PRK08540 133 LLKKAEEHKNTVCIGRTHGQHAVPTTYGMRFAIWASEIQRHLERLEQLKPRVCVGQMTG-AVGTQAAF-GEKGIEIQKRV 210 (449)
T ss_pred HHHHHHHhcCCchhhhcCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHhhheccccc-cccchhhC-CCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 57997543 55667788999
Q ss_pred HHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCCChh
Q psy13008 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPT 332 (638)
Q Consensus 255 A~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~ 332 (638)
++.|||+.+...| ++++||++++++++++.++++|+|||+||++|++ +|||||.+| .+++|||||||||||+
T Consensus 211 a~~LGl~~~~~~~---~~~~rd~~~e~~~~l~~~a~~l~kia~Dl~l~s~---~e~gei~e~~~~~~~GSSiMP~K~NP~ 284 (449)
T PRK08540 211 MEILGLKPVLISN---QVIQRDRHAEFMMFLANIATTLDKIGLEIRNLQR---TEIGEVEEEFGKKQVGSSTMPHKRNPI 284 (449)
T ss_pred HHHcCCCCCCCcC---CccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhhhhcccCCCCCCcCCCCCCcCcH
Confidence 9999999854333 5799999999999999999999999999999995 799999864 5699999999999999
Q ss_pred HHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhh--hh
Q psy13008 333 QVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SL 410 (638)
Q Consensus 333 ~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~--~~ 410 (638)
.+|+++++++++.|....+ +...+.+++++...+..+|.+++++..+.++++.++..++++|+||++||++++.. .+
T Consensus 285 ~~E~i~~~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~ 363 (449)
T PRK08540 285 TSEQICGLARVVRSNVEPA-LLNNPLWDERDLTNSSCERIIFPESCVLTDHILKLMIKVLEGLRFNPENIRRNLELTKGL 363 (449)
T ss_pred HHHHHHHHHHHHHHHHHHH-HhcchhhhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcCH
Confidence 9999999999999988654 44555567777666656788999899999999999999999999999999999974 44
Q ss_pred hHHHhc----C-CCCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 411 MLVTAL----N-PHIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 411 ~lat~L----a-~~ig~~~Ah~iv~----~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
.+++++ + +++||++||+++. .+.++|++++|.+.+. +.|++++|+++|||.+|+|.++.
T Consensus 364 ~~ae~la~~L~~~glg~~~Ah~~v~~l~~~a~~~g~~l~e~~~~~~~~~~~l~~~~l~~~ldp~~~~g~a~~ 435 (449)
T PRK08540 364 IMAEAVMIELAKRGMGRQEAHELVRQAAMKAHEEGRHLKEVLLEDEEVMKYLTEEELEELLDPETYIGTAPE 435 (449)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhccCCHHHHHHHcCHHHhcCchHH
Confidence 444443 3 4799999998765 4778899999988875 56899999999999999998774
No 22
>TIGR00928 purB adenylosuccinate lyase. This family consists of adenylosuccinate lyase, the enzyme that catalyzes step 8 in the purine biosynthesis pathway for de novo synthesis of IMP and also the final reaction in the two-step sequence from IMP to AMP.
Probab=100.00 E-value=2.4e-75 Score=641.78 Aligned_cols=411 Identities=25% Similarity=0.299 Sum_probs=353.5
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~ 98 (638)
+|.+||+.+|+++| ++++++++|+++|+||++||.++| ||+++++.|.+++ ++....+ +.+ ...
T Consensus 1 ~~~~y~~~~~~~if----------s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~~-~~~~~d~--~~l--~~~ 65 (435)
T TIGR00928 1 LDERYGTPEMRAIW----------SEENKFKTWLDVEVALLRALAELGVIPAEAVKEIRAKA-NFTDVDL--ARI--KEI 65 (435)
T ss_pred CCcccCcHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhC-CCCccCH--HHH--HHH
Confidence 46899999999999 899999999999999999999999 9999999998872 2211001 000 000
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
....++++ ++ +++.+.+.+| +.|+ |||+|+||||+++|+++|++|+.+. .+.+.|..++++|.++
T Consensus 66 ~~~~~~~v-~~----~e~~l~~~~g-~~~~--------~vh~g~SsnD~~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~ 130 (435)
T TIGR00928 66 EAVTRHDV-KA----VVYALKEKCG-AEGE--------FIHFGATSNDIVDTALALLLRDALE-IILPKLKQLIDRLKDL 130 (435)
T ss_pred HHHHCcCh-HH----HHHHHHHHhh-hhhh--------heeecccHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 11134453 44 8888888887 4544 5677999999999999999999865 6999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||++++++++ ..+++++++.|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lgGa-~Gt~~~~~~~~-~~~~~~~a~~L 208 (435)
T TIGR00928 131 AVEYKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLLQAKERIKVGGISGA-VGTHAAAYPLV-EEVEERVTEFL 208 (435)
T ss_pred HHHHccchHhHHhcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccch-hhhHhhccccH-HHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999884 79999998877 68899999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEA 336 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ 336 (638)
||+.++.+| ++++||++++++++++.++++|+|||+||++|++ +||+|+.+|. +++|||+|||||||+.+|+
T Consensus 209 Gl~~~~~~~---~~~~rD~~~e~~~~l~~la~~L~ria~Dl~l~s~---~~~~el~~~~~~~~~GSS~MP~K~NP~~~E~ 282 (435)
T TIGR00928 209 GLKPVPIST---QIEPRDRHAELLDALALLATTLEKFAVDIRLLQR---TEHFEVEEPFGKGQVGSSAMPHKRNPIDFEN 282 (435)
T ss_pred CCCCCCCCc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccceecccCCCCCCcCCCCcCcCcHHHHH
Confidence 999854333 7899999999999999999999999999999996 6999999985 3899999999999999999
Q ss_pred HHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhH--HH
Q psy13008 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLML--VT 414 (638)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~l--at 414 (638)
++++++.+.|+...++.. .++++++|.+.+.+.|.++++++.+...++.++.+++++|+||++||++++..++++ ++
T Consensus 283 i~~~a~~~~g~~~~~~~~-~~~~~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~a~ 361 (435)
T TIGR00928 283 VCGLARVIRSVLSPALEN-VPLWHERDLTDSSVERIILPDSFILADIMLKTTLKVVKKLVVNPENILRNLELTLGLIASE 361 (435)
T ss_pred HHHHHHHHHHHHHHHHHH-hhHHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHhHH
Confidence 999999999998776543 377888888877777888899899999999999999999999999999999987764 33
Q ss_pred h----cC-CCCCHHHHHHHHH----HHHH-cCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 415 A----LN-PHIGYDKAAEIAK----HAYK-TGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 415 ~----La-~~ig~~~Ah~iv~----~A~~-~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
+ |+ +++||++||++++ .+.+ +|.++++.+.+. +.+++++++++|||.+|+|.+.+
T Consensus 362 ~la~~L~~~g~g~~~Ah~~v~~~~~~a~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~a~~ 430 (435)
T TIGR00928 362 RVLIALVERGMGREEAYEIVRELAMGAAEVDEPDLLEFLLADERITKYLKEEELAELLDPETYIGNARE 430 (435)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHcccccHHHHHhhCccchhhcCHHHHHHcCCHHHHhChHHH
Confidence 3 33 3799999999754 5667 899999988875 56899999999999999998654
No 23
>PRK04833 argininosuccinate lyase; Provisional
Probab=100.00 E-value=9.8e-75 Score=639.02 Aligned_cols=427 Identities=19% Similarity=0.286 Sum_probs=361.1
Q ss_pred CCCchH--hhHHhhcCCCCCCCCCChHHHHHHHHH---HH--HHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCc
Q psy13008 22 KYYGAQ--TVRSLINFPIGGESERMPEAIISAMGI---LK--KAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHF 93 (638)
Q Consensus 22 ~~yg~~--~~rai~~f~~~~~~~~~~~~~i~a~l~---ve--~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f 93 (638)
.+|+.. .+...| ++...++.++. ++ .||++||.++| ||++++++|.++|+++.++. + .+
T Consensus 6 ~r~~~~~~~~~~~~----------~~~~~~d~~l~~~~i~~~~Aha~~l~e~Gii~~~~a~~I~~al~~i~~~~--~-~~ 72 (455)
T PRK04833 6 GRFTQAADQRFKQF----------NDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQQQLEEALNELLEEV--R-AN 72 (455)
T ss_pred cccCCcchHHHHHH----------hccHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhhh--h-cC
Confidence 477766 666666 45666777777 77 99999999999 99999999999999986521 0 11
Q ss_pred cccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 94 PLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHD 173 (638)
Q Consensus 94 ~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~ 173 (638)
+...+.. ..+| +|++||++|.+.+| +.|++ ||+||||||+++|+++|++|+.+. .+.+.|..+++
T Consensus 73 ~~~~~~~-~~ed----v~~~ie~~L~~~~g-~~g~~--------lH~grSrnD~~~Ta~rl~~r~~l~-~l~~~l~~l~~ 137 (455)
T PRK04833 73 PQQILAS-DAED----IHSWVEGKLIDKVG-DLGKK--------LHTGRSRNDQVATDLKLWCKDQVA-ELLTALRQLQS 137 (455)
T ss_pred CcccCCC-CCch----HHHHHHHHHHHHhc-cccCc--------ccCCCCchhhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 1222222 4556 66669999999998 56654 456999999999999999999976 59999999999
Q ss_pred HHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHH
Q psy13008 174 ALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQ 252 (638)
Q Consensus 174 aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~ 252 (638)
+|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||||+ ||++++|+ +
T Consensus 138 ~L~~~A~~~~~tvm~GrTH~Q~AqP~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgaA~~GT~~~~dr-------~ 210 (455)
T PRK04833 138 ALVETAENNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGSGALAGTAYEIDR-------E 210 (455)
T ss_pred HHHHHHHHcCCCEEeccccCccceeccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCCCH-------H
Confidence 999999999999999999999999999999999999999999999999999999999999986 99999986 5
Q ss_pred HHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCCh
Q psy13008 253 RISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNP 331 (638)
Q Consensus 253 ~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP 331 (638)
++|++|||+. +..|++|++++||+++++++++++++++|+|||+||++|+| +|||++++|+. ++|||||||||||
T Consensus 211 ~~a~~LGf~~-~~~n~~~a~~~rd~~~e~~~~l~~~a~~L~ria~Dl~l~ss---~e~g~~el~~~~~~gSSiMPqKrNP 286 (455)
T PRK04833 211 QLAGWLGFAS-ATRNSLDSVSDRDHVLELLSDASISMVHLSRFAEDLIFFNS---GEAGFVELSDRVTSGSSLMPQKKNP 286 (455)
T ss_pred HHHHHhCCCC-CCCCHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCceeeCCCCCCCcccCCCCCCC
Confidence 7999999998 68899999999999999999999999999999999999997 58998888875 7999999999999
Q ss_pred hHHHHHHHHHHHHhccHHHHHh--cccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhh
Q psy13008 332 TQVEALTMVAAQVMGNHVAVTV--GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (638)
Q Consensus 332 ~~lE~ir~~a~~v~G~~~~~~~--~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~ 409 (638)
+.+|++|++++++.|+..+++. .+.+..++++.+.+ ...+++.+..+.+ ++.++..++++|+||+++|++++..+
T Consensus 287 ~~~E~ir~~a~~~~g~~~~~~~~~~~~~~~~~rd~~~~--~~~l~~~~~~~~~-~l~~~~~~l~~l~v~~~rm~~~~~~g 363 (455)
T PRK04833 287 DALELIRGKCGRVQGALTGMLMTLKGLPLAYNKDMQED--KEGLFDALDTWLD-CLHMAALVLDGIQVKRPRCQEAAQQG 363 (455)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHhCChHHHhhhhhhh--HHHHHHHHHHHHH-HHHHHHHHHhhCeECHHHHHHHHHcc
Confidence 9999999999999999988873 55566677665433 2345666666654 67788899999999999999999988
Q ss_pred hhHHHhcC----C-CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhc
Q psy13008 410 LMLVTALN----P-HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETI 480 (638)
Q Consensus 410 ~~lat~La----~-~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~ 480 (638)
+.++++++ . ++||++||++++ .+.++|+++.+ +..++++.+. +.+.+++.. +
T Consensus 364 ~~~a~~~a~~L~~~g~~~r~Ah~~v~~~~~~a~~~~~~~~~-------~~~~~~~~~~-----------~~~~~~~~~-~ 424 (455)
T PRK04833 364 YANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLED-------LPLAELQKFS-----------SVIGDDVYP-I 424 (455)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhh-------cCHHHHHHhc-----------ccchHHHHH-h
Confidence 88887664 2 699999999976 45678888887 7878888752 235777888 9
Q ss_pred cchhhHHHHHhhhcCCCCCCCCCCchhhh
Q psy13008 481 FHTEKVISQQILAAKVLPPWSRPSCPQAR 509 (638)
Q Consensus 481 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 509 (638)
.+++++|+.+...||+.|..++-...+++
T Consensus 425 l~p~~~v~~r~~~Gg~~~~~v~~~~~~~~ 453 (455)
T PRK04833 425 LSLQSCLDKRAAKGGVSPQQVAQAIAAAK 453 (455)
T ss_pred CCHHHHHHhccCCCCCCHHHHHHHHHHHh
Confidence 99999999999999999988765555443
No 24
>TIGR00838 argH argininosuccinate lyase. This model describes argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens.
Probab=100.00 E-value=7.2e-75 Score=641.15 Aligned_cols=418 Identities=22% Similarity=0.291 Sum_probs=351.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHh
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~l 122 (638)
.|..++...+.+++||++||.+.| ||++++++|.++|+++.++.. +++|+.++. .||+||+ ||+++.+.+
T Consensus 23 ~d~~l~~~~i~~~~Ah~~~L~~~G~l~~~~a~~I~~al~~i~~~~~-~~~~~~~~~----~~d~~~~----ie~~l~e~~ 93 (455)
T TIGR00838 23 FDKELAEYDIEGSIAHTKMLKKAGILTEEEAAKIIEGLNELKEEGR-EGPFILDPD----DEDIHMA----IERELIDRV 93 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCcc-cCCcCCCCC----cCcHHHH----HHHHHHHHh
Confidence 478889999999999999999999 999999999999999987554 566776653 3787776 999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchh
Q psy13008 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (638)
Q Consensus 123 G~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G 202 (638)
|++.|+ |||+||||||+++|+++|++|+.+.. |.+.|..++++|.++|++|+|++||||||+|||||||||
T Consensus 94 g~~~g~--------~iH~g~SrnD~~~Ta~~L~lr~~l~~-l~~~L~~l~~~L~~~A~~~~~~~m~grTH~Q~A~P~T~G 164 (455)
T TIGR00838 94 GEDLGG--------KLHTGRSRNDQVATDLRLYLRDHVLE-LAEALLDLQDALIELAEKHVETLMPGYTHLQRAQPITLA 164 (455)
T ss_pred CCCccC--------CccCCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCEeecccccccceeccHH
Confidence 865554 45679999999999999999999865 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHH
Q psy13008 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (638)
Q Consensus 203 ~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (638)
||+++|+++|.||++||.+++++++.+||||||+ ||+++++++ ++++.|||+. +..|++||+++||+++++
T Consensus 165 ~~~~~~~~~L~r~~~rL~~~~~~~~~~plGg~a~aGt~~~~~r~-------~~a~~LG~~~-~~~n~~~a~~~rd~~~e~ 236 (455)
T TIGR00838 165 HHLLAYAEMLLRDYERLQDALKRVNVSPLGSGALAGTGFPIDRE-------YLAELLGFDA-VTENSLDAVSDRDFILEL 236 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcchhcccCCCCCCCHH-------HHHHHcCCCC-CcCCHHHHHhCcHHHHHH
Confidence 9999999999999999999999999999999987 998888764 6999999998 578999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhc--ccCc
Q psy13008 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVG--GSNG 358 (638)
Q Consensus 282 ~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~--~~~~ 358 (638)
+++++.++++|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|.++++++++.|+..+++.. +.+.
T Consensus 237 ~~~l~~~a~~L~ria~Dl~l~ss---~e~gei~lp~~~~~GSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 313 (455)
T TIGR00838 237 LFVAALIMVHLSRFAEDLILWST---GEFGFVELPDEFSSGSSIMPQKKNPDVAELIRGKTGRVQGNLTGMLMTLKALPL 313 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC---CCCCeeeCCCCCCCccCCCCCCcCChHHHHHHHHHHHHhhhHHHHHHHHhcCCh
Confidence 99999999999999999999998 57999999986 899999999999999999999999999999988753 3344
Q ss_pred cccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHhcCC-----CCCHHHHHHHHH---
Q psy13008 359 HFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALNP-----HIGYDKAAEIAK--- 430 (638)
Q Consensus 359 ~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La~-----~ig~~~Ah~iv~--- 430 (638)
+++++... ....+++.+..+..++ ..+..++++|+||+++|++++..+++++|++++ ++|||+||++|+
T Consensus 314 ~~~rd~~~--~~~~l~~~~~~~~~al-~~~~~~i~~l~v~~~rm~~~~~~~~~~at~la~~Lv~~g~~~r~Ah~~v~~~~ 390 (455)
T TIGR00838 314 AYNRDLQE--DKEPLFDALKTVELSL-EMATGMLDTITVNKERMEEAASAGFSNATELADYLVRKGVPFREAHHIVGELV 390 (455)
T ss_pred HhhhhhHh--hHHHHHHHHHHHHHHH-HHHHHHHccCEECHHHHHHHHHcCccHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 45554322 2344566666666554 455679999999999999999999988887643 699999999875
Q ss_pred -HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhhHHHHHhhhcCCCCCCCCCCchhhh
Q psy13008 431 -HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSCPQAR 509 (638)
Q Consensus 431 -~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 509 (638)
++.++|+++.|++.+.. ..+ ...+.+++.. +++++++|+.+...||+.|...+-...+++
T Consensus 391 ~~a~~~g~~l~~~~~~~~-------~~~-----------~~~~~~~l~~-~ldp~~~v~~r~~~Gg~~~~~~~~~~~~~~ 451 (455)
T TIGR00838 391 ATAIERGKGLEELTLEEL-------QKF-----------SPEFDEDVYE-ALDPESSVEKRDAKGGTAPEEVLQAIAEAK 451 (455)
T ss_pred HHHHHcCCCHHHHHHHHH-------hhh-----------cccCHHHHHH-HCCHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 47888999998665432 111 1112334444 666677778888889988887776666665
Q ss_pred hcc
Q psy13008 510 SII 512 (638)
Q Consensus 510 ~~~ 512 (638)
...
T Consensus 452 ~~~ 454 (455)
T TIGR00838 452 ARL 454 (455)
T ss_pred Hhc
Confidence 543
No 25
>PRK08470 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=8.6e-75 Score=637.43 Aligned_cols=401 Identities=19% Similarity=0.220 Sum_probs=341.4
Q ss_pred CCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHH-HHHcCccccCCcccccccc
Q psy13008 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD-EVISGKLYEDHFPLSIWQT 100 (638)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~-~i~~~~~~~~~f~~~~~~~ 100 (638)
+|++++|+++| ++++++++|++||+||++||+++| ||++++++|.+++. ++.. . .....
T Consensus 4 ~y~~~~~~~i~----------s~~~~~~~~l~ve~A~a~al~~~G~Ip~~~a~~I~~~~~~d~~~--~-------~~~~~ 64 (442)
T PRK08470 4 RYAREEMKKKW----------TMQAKYDAWLEVEKAAVKAWNKLGLIPDSDCEKICKNAKFDIAR--I-------DEIEK 64 (442)
T ss_pred ccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccchHH--H-------HHHHH
Confidence 89999999999 899999999999999999999999 99999999999874 1110 0 00011
Q ss_pred CCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 101 GSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQ 180 (638)
Q Consensus 101 ~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~ 180 (638)
..++|++ + ++..+.+.+|+ .|+ |||+|+|||||+||+++|++|+.+. .+.+.|..++++|.++|+
T Consensus 65 ~~~~dv~-~----~v~~L~e~~g~-~~~--------~vH~G~TsnDi~dTa~~L~lr~~l~-~l~~~l~~l~~~L~~lA~ 129 (442)
T PRK08470 65 TTKHDLI-A----FLTSVSESLGE-ESR--------FVHYGMTSSDCIDTAVALQMRDSLK-LIIEDVKNLMEAIKKRAL 129 (442)
T ss_pred ccCCChH-H----HHHHHHHHccc-ccc--------ceecCCChhchHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 2345542 2 33556777773 343 5677999999999999999999874 699999999999999999
Q ss_pred HhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCC
Q psy13008 181 EFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGL 260 (638)
Q Consensus 181 ~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl 260 (638)
+|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+|||| |+||+.+.+ ..++++++++|||
T Consensus 130 ~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~lgG-AvGt~a~~~----~~v~~~~a~~LGl 204 (442)
T PRK08470 130 EHKDTLMVGRSHGIHGEPITFGLVLAIWYDEIKRHLKALEHTMEVISVGKISG-AMGNFAHAP----LELEELVCEELGL 204 (442)
T ss_pred HhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCcc-hhcccccCC----hHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999987 579976553 4567899999999
Q ss_pred CCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCCChhHHHHHH
Q psy13008 261 PFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEALT 338 (638)
Q Consensus 261 ~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~lE~ir 338 (638)
+.++.+| ++++||+++|+++++++++++|+|||+||++|++ +||+||.++ ++++|||+|||||||+.+|+++
T Consensus 205 ~~~~~~~---~v~~RD~~~e~~~~La~~a~~L~ria~Di~~l~~---~E~~ev~e~~~~g~~GSS~MPhKrNPv~~E~i~ 278 (442)
T PRK08470 205 KPAPVSN---QVIQRDRYARLASALALLASSCEKIAVAIRHLQR---TEVYEAEEYFSKGQKGSSAMPHKRNPVLSENIT 278 (442)
T ss_pred CCCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccceecccCCCCCCCcCCCCCCcCcHHHHHHH
Confidence 9766777 5799999999999999999999999999999995 799999987 3589999999999999999999
Q ss_pred HHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhh--hhhHHH--
Q psy13008 339 MVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVT-- 414 (638)
Q Consensus 339 ~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~--~~~lat-- 414 (638)
++++.+.|....+ +.+.+.+++++...+...|..++.+..+++.++..+..++++|+||++||++|++. ++.+++
T Consensus 279 ~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~nl~~~~g~~~ae~l 357 (442)
T PRK08470 279 GLCRVIRSFATPA-LENVALWHERDISHSSVERFILPDAFITTDFMLHRLNNVIENLVVYPENMMKNLNLTGGLVFSQRV 357 (442)
T ss_pred HHHHHHHHHHHHH-HHhchHhhccCCchhHHHhhhHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccChHHHHHH
Confidence 9999999986444 44456678888765555677888888899999999999999999999999999976 445444
Q ss_pred --hcCC-CCCHHHHHHHHH----HHHHc---CCC---------HHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 415 --ALNP-HIGYDKAAEIAK----HAYKT---GIT---------LKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 415 --~La~-~ig~~~Ah~iv~----~A~~~---g~~---------l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
.|++ ++||++||++++ ++.++ |++ |.|.+.++ ..+++++|+++|||..|+|.+..
T Consensus 358 ~~~L~~~G~~~~~Ah~~V~~~~~~a~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~l~~~~dp~~~~g~~~~ 435 (442)
T PRK08470 358 LLELPKKGVSREDAYKIVQRNAMKVWEDLQQGKAAINEKGESLFLQALLNDEDLRKSLSEEEIRACFDYSYYTKNVDA 435 (442)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcCCCccccccHHHHHHHHhcCHHhHhcCCHHHHHHHhCHHHHHhhHHH
Confidence 3444 699999999975 44566 888 99988764 46899999999999999998764
No 26
>PRK07492 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=4.5e-74 Score=629.89 Aligned_cols=407 Identities=19% Similarity=0.226 Sum_probs=342.0
Q ss_pred CCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHH-HcCccccCCcccccc
Q psy13008 21 DKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEV-ISGKLYEDHFPLSIW 98 (638)
Q Consensus 21 ~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i-~~~~~~~~~f~~~~~ 98 (638)
..+||+.+|+++| ++++++++|++||.|++++|+++| ||++++++|.+++... .+ + + .+...
T Consensus 2 ~~~y~~~~~~~i~----------s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~~~~~d--~--~--~~~~~ 65 (435)
T PRK07492 2 IPRYSRPEMVAIW----------EPETKFRIWFEIEAHACEAQAELGVIPKEAAETIWEKGKDAEFD--V--A--RIDEI 65 (435)
T ss_pred CcccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCcccCCC--H--H--HHHHH
Confidence 4799999999999 899999999999999999999999 9999999998876320 01 0 0 00000
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
....++|+ ++ +++.+.+.+|+ .|+ |||+|+|||||+||+++|++|+.+ +.|.+.|..++++|.++
T Consensus 66 ~~~~~h~v-~a----~~~~L~~~~g~-~~~--------~vH~G~Ts~Di~dTa~~L~lr~~~-~~l~~~l~~l~~~L~~~ 130 (435)
T PRK07492 66 EAVTKHDV-IA----FLTHLAEFVGP-DAR--------FVHQGMTSSDVLDTCLNVQLVRAA-DLLLADLDRVLAALKKR 130 (435)
T ss_pred HHHhCCCh-HH----HHHHHHHHhhH-hhh--------hhcCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 11123331 22 55677788874 344 566799999999999999999986 56999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+||+||||||+|||+|||||||+++|+++|.||++||.+++++++++||||+ +||++++++ .++++++++|
T Consensus 131 A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgGA-vGT~~~~~~----~~~~~~a~~L 205 (435)
T PRK07492 131 AFEHKDTPTIGRSHGIHAEPTTFGLKLARFYAEFARNRERLVAAREEIATCAISGA-VGTFANIDP----RVEEHVAKKL 205 (435)
T ss_pred HHHcCCCEEeeccCCccceehhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCccc-ccCCccCCh----HHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999884 799988874 5678999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCCChhHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEA 336 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~lE~ 336 (638)
||+.++..+ ++++||+++++++++++++++|+|||+||++|++ +||+||.++ ++++|||+|||||||+.+|+
T Consensus 206 Gl~~~~~~~---~v~~RD~~~e~~~~la~~~~~L~ria~Di~~l~~---~e~~El~e~~~~g~~GSS~MPhKrNP~~~E~ 279 (435)
T PRK07492 206 GLKPEPVST---QVIPRDRHAMFFATLGVIASSIERLAIEIRHLQR---TEVLEAEEFFSPGQKGSSAMPHKRNPVLTEN 279 (435)
T ss_pred CCCCCCccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhccccCCCCCCCCCCCCCCCcHHHHH
Confidence 998743332 4699999999999999999999999999999995 799999976 46899999999999999999
Q ss_pred HHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhh--hhhHHH
Q psy13008 337 LTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVT 414 (638)
Q Consensus 337 ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~--~~~lat 414 (638)
++++++.+.|...++ +.+.+.+++++...+...|.+++.+..+.+.++..+..++++|+||++||++|++. ++.+++
T Consensus 280 i~~~a~~~~~~~~~~-~~~~~~~~eRD~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~i~ae 358 (435)
T PRK07492 280 LTGLARLVRSYVVPA-MENVALWHERDISHSSVERMIGPDATITLDFALNRLAGVIEKLVVYPENMLKNLNKFGGLVHSQ 358 (435)
T ss_pred HHHHHHHHHHHHHHH-HHhcchhhccCChHHHHhhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhcCChhHHH
Confidence 999999999986554 34446677877654445678888998888889999999999999999999999985 334444
Q ss_pred ----hcCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCC
Q psy13008 415 ----ALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHP 470 (638)
Q Consensus 415 ----~La~-~ig~~~Ah~iv~----~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~~ 470 (638)
.|++ ++||++||++++ ++.++|.+|.|.+.++ ..|+++||+++|||.+|+|.+..+
T Consensus 359 ~~~~~L~~~g~~r~~Ah~~V~~~~~~a~~~~~~l~e~l~~~~~~~~~l~~~el~~~~dp~~ylg~~~~~ 427 (435)
T PRK07492 359 RVLLALTQAGVSREDAYRLVQRNAMKVWEQGGDFLEELKADPEVRAALSEEEIEELFDLGYHTKHVDTI 427 (435)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhCCHHhHhcCCHHHHHHHhCHHHHhcchHHH
Confidence 4555 699999999875 5578899999998864 478999999999999999987653
No 27
>PRK06705 argininosuccinate lyase; Provisional
Probab=100.00 E-value=2.1e-74 Score=642.14 Aligned_cols=422 Identities=18% Similarity=0.197 Sum_probs=341.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHh
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~l 122 (638)
.++.+++.|+++++||++||.++| ||++++++|.+++.++.+.. .+.+.. ...++|+|++ ||.++.+..
T Consensus 33 ~~~~~~~~~l~ve~Aha~~l~~~GiIp~e~a~~I~~al~~~~~~~--~~~l~~----~~~~edv~~~----ie~~l~~~~ 102 (502)
T PRK06705 33 QRNYLLKDMFQVHKAHIVMLTEENLMKKEEAKFILHALKKVEEIP--EEQLLY----TEQHEDLFFL----VEHLISQEA 102 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHhhhcc--cCcccc----CCCCCchHHH----HHHHHHHhc
Confidence 578999999999999999999999 99999999999998763311 233332 2367887777 888887777
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchh
Q psy13008 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (638)
Q Consensus 123 G~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G 202 (638)
|++.|+| +|+|||||||++|+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||
T Consensus 103 G~~~g~~--------lH~GrSrnD~v~Ta~~L~lr~~l~-~l~~~l~~l~~~l~~~A~~~~~t~m~g~TH~Q~AqP~T~G 173 (502)
T PRK06705 103 KSDFVSN--------MHIGRSRNDMGVTMYRMSLRRYVL-RLMEHHLLLQESILQLAADHKETIMPAYTHTQPAQPTTFG 173 (502)
T ss_pred Cchhhcc--------ccCCCCHhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEEecccCCccceehHHH
Confidence 7556664 456999999999999999999976 5999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHH
Q psy13008 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (638)
Q Consensus 203 ~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (638)
||+++|+++|.||++||.+++++++.+||||||. ||++++ .++++|++|||+. +..|++|++++||+++|+
T Consensus 174 ~~l~~~~~~l~r~~~rL~~~~~r~~~~plGgaag~gt~~~~-------~r~~~a~~LGf~~-~~~ns~~a~~~rD~~~e~ 245 (502)
T PRK06705 174 HYTLAIYDTMQRDLERMKKTYKLLNQSPMGAAALSTTSFPI-------KRERVADLLGFTN-VIENSYDAVAGADYLLEV 245 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCchhhhhccCCchH-------HHHHHHHHcCCCC-CcCCHHHHHhccHHHHHH
Confidence 9999999999999999999999999999999874 555543 3478999999997 677999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhc--ccCc
Q psy13008 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVG--GSNG 358 (638)
Q Consensus 282 ~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~--~~~~ 358 (638)
++++++++++|+|||+||++|+| +|||+|++|+. ++|||||||||||+.+|+||++++++.|++.+++.. +.+.
T Consensus 246 ~~~la~~~~~L~Ria~Dl~~~ss---~e~g~iel~e~~~~gSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~l~~~~~~~~ 322 (502)
T PRK06705 246 SSLLMVMMTNTSRWIHDFLLLAT---KEYDGITVARPYVQISSIMPQKRNPVSIEHARAITSSALGEAFTVFQMIHNTPF 322 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeecCCCCCccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999997 68998888876 689999999999999999999999999999888743 2222
Q ss_pred cccccccchhHHhhHHHHHHHHHHHH---HHHHHHhhhccccChHHHHHhhhhhhhHHHhcC----C--CCCHHHHHHHH
Q psy13008 359 HFELNVFKPLIVSNVLRSIRLLADTT---ESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN----P--HIGYDKAAEIA 429 (638)
Q Consensus 359 ~~e~~~~~~~i~~~ll~s~~~l~~~~---l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La----~--~ig~~~Ah~iv 429 (638)
.+..+. .|.+.+.++...+.+ +..+..++++|+||++||++|+..++.++|+++ + ++||++||++|
T Consensus 323 ~~~~d~-----q~~~~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~At~la~~Lv~~~Gl~fr~Ah~iV 397 (502)
T PRK06705 323 GDIVDT-----EDDLQPYLYKGIEKAIRVFCIMNAVIRTMKVEEDTLKRRSYKHAITITDFADVLTKNYGIPFRHAHHAA 397 (502)
T ss_pred hhhhhh-----HhhhhhHHHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHhcCchHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 222221 334444444444444 667789999999999999999999888887653 3 69999999987
Q ss_pred HH----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhhHHHHHhhhcCCCCCCCCCCc
Q psy13008 430 KH----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRPSC 505 (638)
Q Consensus 430 ~~----A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 505 (638)
++ +.++|++|.+... ++....+.+. ++ ..+..+++.. ++|++++|..+...||+.|..++-..
T Consensus 398 ~~~v~~a~~~~~~l~~~~~-------~~~~~~~~~~--~~---~~~~~~~l~~-~ldp~~~v~~r~~~Gg~~p~~v~~~~ 464 (502)
T PRK06705 398 SVIANMSLEQKKELHELCF-------KDVNIYLQEK--FK---IQLLEKEWEE-IISPEAFIQKRNVYGGPSKKEMERMI 464 (502)
T ss_pred HHHHHHHHHhCCCHHHhhH-------HHHHhhhhhh--hh---hcCCHHHHHH-HCCHHHHHhhccCCCCCCHHHHHHHH
Confidence 64 5778888887433 3332211110 00 1122344555 77777777788888888888887777
Q ss_pred hhhhhccc
Q psy13008 506 PQARSIIR 513 (638)
Q Consensus 506 ~~~~~~~~ 513 (638)
.++++...
T Consensus 465 ~~~~~~~~ 472 (502)
T PRK06705 465 NNRKELFR 472 (502)
T ss_pred HHHHHHHH
Confidence 77766643
No 28
>PRK07380 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.9e-73 Score=622.90 Aligned_cols=403 Identities=21% Similarity=0.244 Sum_probs=339.7
Q ss_pred CCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy13008 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (638)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~ 101 (638)
+|++++|+++| ++++++++|++||.|++++++++| ||++++++|.+.++ +.-.++ ......
T Consensus 4 ~y~~~~~~~~f----------s~~~~~~~~l~vE~ala~a~~~~g~ip~~aa~~i~~~~~-~d~~~i-------~~~~~~ 65 (431)
T PRK07380 4 RYTLPEMGNIW----------TDTAKFQTWLDVEIAVCEAQAELGKIPQEAVEEIKAKAN-FDPQRI-------LEIEAE 65 (431)
T ss_pred ccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhccC-CCHHHH-------HHHHHH
Confidence 89999999999 899999999999999999999999 99999999987652 200001 000111
Q ss_pred CcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 102 SGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQE 181 (638)
Q Consensus 102 ~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~ 181 (638)
.++| +-. +.+.+.+.+| +.|+ |||+|+|||||+||+++|++|+.+ ..+.+.|.+++++|.++|++
T Consensus 66 ~~h~----v~a-~v~~l~~~~g-~~~~--------~vH~G~Ts~Di~dTa~~L~lr~~l-~~l~~~l~~l~~~L~~lA~~ 130 (431)
T PRK07380 66 VRHD----VIA-FLTNVNEYVG-DAGR--------YIHLGMTSSDVLDTGLALQLVASL-DLLLEELEDLIQAIRYQARE 130 (431)
T ss_pred hCCC----hHH-HHHHHHHHHH-Hhhc--------cccCCCChhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 2333 222 2234566776 4444 566799999999999999999987 56999999999999999999
Q ss_pred hcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCCC
Q psy13008 182 FQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLP 261 (638)
Q Consensus 182 ~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl~ 261 (638)
|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+|||| |+||++++++ ++.+++++.|||+
T Consensus 131 ~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~RL~~~~~~~~~~~l~G-AvGt~~~~~~----~~~~~~a~~LGl~ 205 (431)
T PRK07380 131 HRNTVMIGRSHGIHAEPITFGFKLAGWLAETLRNRERLVRLREDIAVGQISG-AVGTYANTDP----RVEAITCQKLGLK 205 (431)
T ss_pred cCCCeeechhcCccceechHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcch-hhcCcccCCh----hHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999976 5799988875 4567899999999
Q ss_pred CCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCCChhHHHHHHH
Q psy13008 262 FKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEALTM 339 (638)
Q Consensus 262 ~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~lE~ir~ 339 (638)
.++.+| ++++||+++++++++++++++|+|||+||++|++ +||+|+.++ .+++|||+|||||||+.+|++++
T Consensus 206 ~~~~~~---~v~~rd~~~e~~~~la~~a~~L~kia~Di~~l~~---~~~~el~e~~~~g~~GSS~MPhKrNP~~~E~i~~ 279 (431)
T PRK07380 206 PDTAST---QVISRDRHAEYVQTLALVGASLERFATEIRNLQR---TDVLEVEEYFAKGQKGSSAMPHKRNPIRSERLSG 279 (431)
T ss_pred CCCCCC---CccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCceeecccCCCCCCCCcCCCCCCCCHHHHHHHH
Confidence 754432 5799999999999999999999999999999994 799999876 35799999999999999999999
Q ss_pred HHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhh--hhhhHHH---
Q psy13008 340 VAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVN--DSLMLVT--- 414 (638)
Q Consensus 340 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~--~~~~lat--- 414 (638)
+|+.+.|...++ +.+.+.+++++...+...|..++.+..+++.++..+..++++|+||++||++|+. .++.+++
T Consensus 280 ~a~~~~g~~~~~-~~~~~~~~eRD~~~~~~e~~~l~~~~~~~~~~l~~~~~~l~~L~v~~~rm~~nl~~~~g~~~ae~~~ 358 (431)
T PRK07380 280 LARVLRSYAVAA-LENVALWHERDISHSSVERVMLPDCSILLHFMLREMTDLVKNLLVYPENMRRNMNIYGGVVFSQRVL 358 (431)
T ss_pred HHHHHHHHHHHH-HHhchhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhcCChHHHHHHH
Confidence 999999998764 4455567788776555568888999888889999999999999999999999996 4455444
Q ss_pred -hcCC-CCCHHHHHHHHH----HHHH-cCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCC
Q psy13008 415 -ALNP-HIGYDKAAEIAK----HAYK-TGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHP 470 (638)
Q Consensus 415 -~La~-~ig~~~Ah~iv~----~A~~-~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~~ 470 (638)
.|++ ++||++||++++ ++.+ +|.+|.|++.++ +.|+++||++++||..|+|.+..+
T Consensus 359 ~~Lv~~gl~r~~Ah~~V~~~~~~a~~~~~~~l~e~l~~~~~~~~~l~~~~l~~~~dp~~ylg~~~~~ 425 (431)
T PRK07380 359 LALVEKGMSREEAYRLVQKNAHTAWNTEGGNFRANLEADPEVTQLLSAAELADCFDPQLHLKNLDVI 425 (431)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCHHHHHHcChHhhhcCCHHHHHHhhCHHHHhcchHHH
Confidence 3445 699999999875 5667 899999999875 468999999999999999987653
No 29
>PRK06390 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.3e-73 Score=628.12 Aligned_cols=415 Identities=22% Similarity=0.292 Sum_probs=346.0
Q ss_pred cccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcc
Q psy13008 16 LEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFP 94 (638)
Q Consensus 16 ~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~ 94 (638)
+..|++.+||+.+|+++| ++++++++|+++|.||++||.++| ||++++++|.+++..... +. ..
T Consensus 2 ~~~~~~~~y~~~~~~~i~----------s~~~~~~~~l~ve~A~a~al~~~Giip~~~a~~I~~~l~~~~~-d~-~~--- 66 (451)
T PRK06390 2 VVSPIEYRYGRDQVKYIF----------DDENRLRYMLKVEAAIAKAEYEYGIIPRDAFLDIKNAVDSNSV-RL-ER--- 66 (451)
T ss_pred CCCCcCcccCCHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccccC-CH-HH---
Confidence 468999999999999999 899999999999999999999999 999999999999865311 11 00
Q ss_pred ccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 95 LSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDA 174 (638)
Q Consensus 95 ~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~a 174 (638)
+.......++|+ ++ +++.+.+.+| +.|+ |||+|+|||||++|+++|++|+.+. .|.+.|..++++
T Consensus 67 ~~~~~~~~~~dv-~~----~~~~L~~~~g-~~~~--------~iH~G~SsnDi~~Ta~~L~lr~~l~-~l~~~l~~l~~~ 131 (451)
T PRK06390 67 VREIESEIKHDV-MA----LVEALSEQCS-AGKN--------YVHFGVTSNDINDTATALQIHDFVS-IIKDDIKNLMET 131 (451)
T ss_pred HHHHHHHhCCCc-HH----HHHHHHHHhh-hhhh--------heecCccHhhhHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 000112235665 44 7788888887 5554 4567999999999999999999875 599999999999
Q ss_pred HHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHH
Q psy13008 175 LDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRI 254 (638)
Q Consensus 175 L~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~l 254 (638)
|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+++|| ++||+...... ...+++++
T Consensus 132 L~~lA~~~~~t~m~grTH~Q~A~P~T~G~~~~~~~~~l~r~~~RL~~~~~r~~~~~~~g-avGt~a~~g~~-~~~~~~~~ 209 (451)
T PRK06390 132 LIKLIDEYKDSPMMGRTHGQHASPITFGLKFAVYLDEMSRHLDRLTEMGDRAFAGKVLG-PVGTGAALGKD-ALDIQNRV 209 (451)
T ss_pred HHHHHHHhCCCchhhhhCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC-hhcChhhCCCc-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 57997766433 56788999
Q ss_pred HHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEc--C-CCCCCCCCCCCCCCh
Q psy13008 255 SELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKL--P-ENEPGSSIMPGKVNP 331 (638)
Q Consensus 255 A~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~l--p-~~~~GSSiMPqKrNP 331 (638)
+++|||+.+. ..+++++||+++++++++++++++|+|||+||++|+| +|||||.+ + ++++|||||||||||
T Consensus 210 a~~LGl~~~~---~~~~~~~rD~~~e~~~~l~~la~~l~kia~Di~l~ss---~e~g~v~E~~~~~~~~GSSiMP~KrNP 283 (451)
T PRK06390 210 MEILGIYSEI---GSTQIVNRDRYIEYLSVINGISVTLEKIATEIRNLQR---PEIDEVSEYFDEESQVGSSSMPSKVNP 283 (451)
T ss_pred HHHcCCCCCC---CccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccchhhcccccCCCCCccCCCCCCCc
Confidence 9999999742 2347899999999999999999999999999999997 57888853 3 369999999999999
Q ss_pred hHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhh
Q psy13008 332 TQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM 411 (638)
Q Consensus 332 ~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~ 411 (638)
+.+|.+++++..+.+........+ ..+++++...+...|..++.+..+.+.++..+..++++|+||++||++|++..+.
T Consensus 284 v~~E~i~~~a~~~~~l~~~~~~~~-~~~~erd~~~~~~e~~~~~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~ 362 (451)
T PRK06390 284 INSENVVSLSRFIRSLIIPEYEAG-VTWHERDLTNSALERFTIPYASILIDYVLYNMNDVLSHLIIKEDEIRRNLESDDS 362 (451)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhh-hHhhccCCcchHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHhccch
Confidence 999999999977777665333333 3336666555444566678887778888889999999999999999999998443
Q ss_pred -----HHHhcCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHc---CCCCHHHHhhhcCcccccCCCCC
Q psy13008 412 -----LVTALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKL---GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 412 -----lat~La~-~ig~~~Ah~iv~----~A~~~g~~l~eal~~~---~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
+++.|++ ++||++||+++. ++.++|+++++++.+. +.++++++++++||.+|+|.+++
T Consensus 363 ~~se~la~~L~~~G~~~~~Ah~~v~~~~~~a~~~g~~l~~~~~~~~~~~~l~~~~l~~~ldP~~~i~~a~~ 433 (451)
T PRK06390 363 IMSESIVRALTLSGMPRQDAHEFVRRASMEARSNGKSLKSSLIEAGILKYIDEKTLDRAMDPANFIGQAPS 433 (451)
T ss_pred hhHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHhChhhhcCCHHHHHHhcCHHHHhhhhHH
Confidence 3445666 699999999865 4678899999988875 34899999999999999996544
No 30
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.2e-73 Score=612.95 Aligned_cols=405 Identities=25% Similarity=0.339 Sum_probs=353.9
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHH-------HHHcCccccC
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAAD-------EVISGKLYED 91 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~-------~i~~~~~~~~ 91 (638)
.+.||++++|+++| ++++.+++|++||.|+++|++++| ||+++++.|.+++. .|.+.+
T Consensus 1 ~~~RY~~~em~~if----------S~~~~~~~~l~vE~ala~A~aelG~Ip~~a~~~I~~~~~~~~~d~~~i~eie---- 66 (438)
T COG0015 1 LDGRYSSPEMRAIF----------SEEAKLRAWLKVEAALARAQAELGVIPAEAAAEIDAAAAFAEFDLERIKEIE---- 66 (438)
T ss_pred CCcccCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHhcccccCHHHHHHHH----
Confidence 36899999999999 899999999999999999999999 99999999998863 221111
Q ss_pred CccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 92 HFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQML 171 (638)
Q Consensus 92 ~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L 171 (638)
...++|+ ++ +...+.+.+|++. +.|||+|.|||||+||++.|++|+.+ ++|.++|.++
T Consensus 67 --------~~t~HdV-~a----~v~~l~e~~~~~~--------~~~VH~GaTS~DI~Dta~~L~lk~a~-~ii~~~l~~l 124 (438)
T COG0015 67 --------AETGHDV-KA----LVRALAEKVGEEA--------SEYVHFGATSQDIIDTALALQLKEAL-DLILPDLKRL 124 (438)
T ss_pred --------HHhCCCc-HH----HHHHHHHhcCccc--------ccceecccchHHHHhHHHHHHHHHHH-HHHHHHHHHH
Confidence 0122332 22 3345567776422 24788899999999999999999875 6899999999
Q ss_pred HHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHH
Q psy13008 172 HDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCT 251 (638)
Q Consensus 172 ~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~ 251 (638)
+++|.++|.+|+||+|+||||+|||+|||||++++.|++++.|+++||.++.+++..+++||+ +||..+. ++.+..++
T Consensus 125 ~~~L~~~A~~~k~t~m~GRTHgq~A~PtT~G~k~A~w~~el~R~~~rL~~~~~~~~~g~i~Ga-~Gt~Aa~-~~~~~~ve 202 (438)
T COG0015 125 IEALAELALEHKDTPMLGRTHGQPAEPTTFGKKFANWLAELLRHLERLEEAEERIIVGKIGGA-VGTLAAL-GDLGAEVE 202 (438)
T ss_pred HHHHHHHHHHhCCCeecccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccc-hhhHhhc-CchhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999995 7996554 55668899
Q ss_pred HHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCC
Q psy13008 252 QRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKV 329 (638)
Q Consensus 252 ~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKr 329 (638)
+++++.|||...+.++ |+.+||+++||+++|++++++|.|||.||++|+ ++|++||.+|. +++|||+|||||
T Consensus 203 ~~v~e~LGL~~~p~st---q~~~RD~~ae~~~~La~i~~sl~k~a~dIr~l~---~~e~~Ev~E~f~~gq~GSSaMPHKr 276 (438)
T COG0015 203 ERVAEKLGLKPAPIST---QVSPRDRIAEFFSALALLAGSLEKFARDIRLLQ---RTEVGEVEEPFAKGQVGSSAMPHKR 276 (438)
T ss_pred HHHHHHcCCCCCCCCc---ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccccccccccCCCCCCCCCCCccc
Confidence 9999999999766666 899999999999999999999999999999999 58999999984 699999999999
Q ss_pred ChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhh
Q psy13008 330 NPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (638)
Q Consensus 330 NP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~ 409 (638)
||+.+|++.++++.+.+....++.+. ..|+|++...+...|..+|..+.+++.++..+.+++++|+||+++|++|++..
T Consensus 277 NPi~~E~~~glar~~r~~~~~~~e~~-~~whERdlt~ssver~~Lp~~~~~~~~aL~~~~~vl~~L~v~~~~m~~nL~~~ 355 (438)
T COG0015 277 NPIDSENVTGLARVARALVSTLLENL-VLWHERDLTDSSVERVILPDAFIAADGALNRLLNVLEGLEVNPERMRRNLDLT 355 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHh-HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHhhc
Confidence 99999999999999999988877666 88999998777778999999999999999999999999999999999999988
Q ss_pred hhHH------HhcCC-CCCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCC
Q psy13008 410 LMLV------TALNP-HIGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYH 469 (638)
Q Consensus 410 ~~la------t~La~-~ig~~~Ah~iv~----~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~ 469 (638)
++++ .++.+ ++||++||++++ .+.+++++|.+.+... +++++++++++|||.+|+|.+++
T Consensus 356 ~gli~se~v~~~l~~~g~~Re~a~elvr~~a~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~~dp~~y~G~a~~ 430 (438)
T COG0015 356 LGLIASERVMLALRKKGMGREEAHELVREKAMKAWEQGKEFLELLLADERVTKYLSEEELLELLDPANYLGRADE 430 (438)
T ss_pred cchhhhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccchHHHhccchhhhccCcHHHHHHcCCHHHHhhHHHH
Confidence 7653 24555 899999999975 5678899997766653 58999999999999999999844
No 31
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL). This group contains ASAL and related proteins. It is a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASAL is a cytosolic enzyme which catalyzes the reversible breakdown of argininosuccinate to arginine and fumarate during arginine biosynthesis. In ureotelic species ASAL also catalyzes a reaction involved in the production of urea. Included in this group are the major soluble avian eye lens proteins from duck, delta 1 and delta 2 crystallin. Of these two isoforms only delta 2 has retained ASAL activity. These crystallins may have evolved by, gene recruitment of ASAL followed by gene duplication.
Probab=100.00 E-value=2.5e-72 Score=618.16 Aligned_cols=391 Identities=22% Similarity=0.294 Sum_probs=333.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHh
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~l 122 (638)
.|++++++|+.+++||++||.+.| ||++++++|.++|+++.++ +..+.|+.+. .+++.|++ ++..+++.+
T Consensus 4 ~d~~~~~~~~~ve~A~a~al~~~Gii~~~~a~~I~~al~~~~~~-~~~~~~~~~~----~~~~~~~~----~e~~l~~~~ 74 (435)
T cd01359 4 FDRRLFEEDIAGSIAHAVMLAEQGILTEEEAAKILAGLAKIRAE-IEAGAFELDP----EDEDIHMA----IERRLIERI 74 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhh-cccCCccCCC----CCCcHHHH----HHHHHHHHH
Confidence 578999999999999999999999 9999999999999998653 2245565542 56788888 666667777
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchh
Q psy13008 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (638)
Q Consensus 123 G~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G 202 (638)
| +.|+ |||+|+||||+++|+++|++|+.+. .|.+.|.+++++|.++|++|+||+||||||+|||||||||
T Consensus 75 g-~~~~--------~iH~G~SsnDi~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTh~Q~A~P~T~G 144 (435)
T cd01359 75 G-DVGG--------KLHTGRSRNDQVATDLRLYLRDALL-ELLELLLDLQRALLDRAEEHADTIMPGYTHLQRAQPITFG 144 (435)
T ss_pred H-HHHh--------hhhccCCHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEecCCCCCccceeccHH
Confidence 7 5554 4567999999999999999999976 5999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHH
Q psy13008 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEV 281 (638)
Q Consensus 203 ~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~ 281 (638)
||+++|+++|.|+++||.+++++++.+||||++. ||++++++ +++|++|||+. +..|+++++++||+++++
T Consensus 145 ~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaag~gt~~~~~~-------~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~ 216 (435)
T cd01359 145 HYLLAYAEMLERDLERLADAYKRVNVSPLGAGALAGTTFPIDR-------ERTAELLGFDG-PTENSLDAVSDRDFVLEF 216 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHcCCCC-CccCHHHHHhcchHHHHH
Confidence 9999999999999999999999999999999875 78777765 46999999996 678888989999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhccc--Cc
Q psy13008 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGS--NG 358 (638)
Q Consensus 282 ~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~--~~ 358 (638)
++++++++++|+|||+||++|+| +|||||.+|+. .+|||||||||||+.+|.++++++.+.|...+++.... +.
T Consensus 217 ~~~l~~~a~~l~ria~Dl~l~~~---~e~gev~lpe~~~~GSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~ 293 (435)
T cd01359 217 LSAAALLMVHLSRLAEDLILWST---QEFGFVELPDAYSTGSSIMPQKKNPDVLELIRGKAGRVIGALAGLLTTLKGLPL 293 (435)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---CCCCeeeCCCCCCCccccCCCCCCCcHHHHHHHHHHHHhhHHhHHHHHhcCCCC
Confidence 99999999999999999999997 58999999986 58999999999999999999999999999988875432 34
Q ss_pred cccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHhcC------CCCCHHHHHHHHH--
Q psy13008 359 HFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN------PHIGYDKAAEIAK-- 430 (638)
Q Consensus 359 ~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La------~~ig~~~Ah~iv~-- 430 (638)
+++++... .|..++.+..+...++..+..++++|+||+++|++++..+++++++++ .++||++||+++.
T Consensus 294 ~~~~d~~~---~~~~l~~~~~~~~~al~~~~~~l~~l~v~~~~m~~~l~~~~~~a~~l~~~l~~~~g~~~r~Ah~~v~~~ 370 (435)
T cd01359 294 AYNKDLQE---DKEPLFDAVDTLIASLRLLTGVISTLTVNPERMREAAEAGFSTATDLADYLVREKGVPFREAHHIVGRA 370 (435)
T ss_pred ccchhHHH---hhHHHHHHHHHHHHHHHHHHHHHhhCEECHHHHHHHHhcCccHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 45554322 234444544555556667778999999999999999998888887664 4799999999764
Q ss_pred --HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCC
Q psy13008 431 --HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPE 467 (638)
Q Consensus 431 --~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a 467 (638)
++.++|+++.|.+.+. +.+++++++++|||.+|+|..
T Consensus 371 ~~~a~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~~~~r 413 (435)
T cd01359 371 VRLAEEKGKDLSDLTLAELQAISPLFEEDVREALDPENSVERR 413 (435)
T ss_pred HHHHHHcCCChhhcCHHHHHhhcccCHHHHHHhCCHHHHHHhc
Confidence 5678899998876654 668899999988888888643
No 32
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2. This subgroup contains mainly eukaryotic proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). ASL deficiency has been linked to several pathologies including psychomotor retardation with autistic features, epilepsy and muscle wasting.
Probab=100.00 E-value=9.6e-71 Score=604.71 Aligned_cols=407 Identities=18% Similarity=0.183 Sum_probs=344.6
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHcCccccCCccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG--LDSKIADTISKAADEVISGKLYEDHFPLSI 97 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G--I~~e~a~~I~~al~~i~~~~~~~~~f~~~~ 97 (638)
+|.+|+.++|+++| ++++++++|+++|.|+++++++.| ||+++++.|.+++.++ + . + .+..
T Consensus 1 ~~~ry~~~~~~~~f----------s~~~~~~~~l~~e~ala~a~~~~g~~ip~~~a~~i~~~~~~~-d--~--~--~i~~ 63 (436)
T cd03302 1 LASRYASKEMVYIF----------SPRKKFSTWRKLWLWLAEAEKELGLDISDEQIEEMKANVENI-D--F--E--IAAA 63 (436)
T ss_pred CCCCcCCHHHHHHc----------ChHHHHHHHHHHHHHHHHhhHHhCCCCCHHHHHHHHHhhhcC-C--H--H--HHHH
Confidence 46899999999999 899999999999999999999999 7999999998877221 1 0 0 0000
Q ss_pred cccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 98 WQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDK 177 (638)
Q Consensus 98 ~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~ 177 (638)
.....+.|+ .. ++..+.+.+| +.|+ |||+|+||||+++|++.|++|+.+ ..|.+.|..++++|.+
T Consensus 64 ~e~~~~hdv----~a-~~~~l~~~~~-~~~~--------~vH~G~TS~Di~dta~~L~lr~a~-~~l~~~L~~l~~~L~~ 128 (436)
T cd03302 64 EEKKLRHDV----MA-HVHAFGLLCP-AAAG--------IIHLGATSCFVTDNTDLIQIRDAL-DLILPKLAAVIDRLAE 128 (436)
T ss_pred HHHHhCcCc----hH-HHHHHHHHhH-hccC--------eeeeCcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 011133443 22 2334677776 4544 566799999999999999999987 5699999999999999
Q ss_pred HHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCC------CCCCchhhHHHH
Q psy13008 178 KSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG------LNTYVGFAENCT 251 (638)
Q Consensus 178 lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~------~~~d~~~~~~v~ 251 (638)
+|++|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+++||+ +||+ ++.+++.+.+++
T Consensus 129 ~A~~~~dt~m~GrTH~Q~A~P~TfG~~~a~~~~~L~r~~~RL~~~~~~~~~~~~~Ga-vGt~a~~~~~~~~dr~~~~~v~ 207 (436)
T cd03302 129 FALEYKDLPTLGFTHYQPAQLTTVGKRACLWIQDLLMDLRNLERLRDDLRFRGVKGT-TGTQASFLDLFEGDHDKVEALD 207 (436)
T ss_pred HHHHhCCCeeeccccCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcCh-hhhhHHHHhcCCchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999985 6775 234444467888
Q ss_pred HHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCC
Q psy13008 252 QRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKV 329 (638)
Q Consensus 252 ~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKr 329 (638)
++++++|||..+ . +..+++++||+++|+++++++++++|+|||+||++|+| +|||.+| .+++|||||||||
T Consensus 208 ~~~a~~LGl~~~-~-~~~~~v~~rD~~~e~~~~la~~a~~L~riA~Dl~l~~s-----~~el~e~~~~g~~GSS~MPhKr 280 (436)
T cd03302 208 ELVTKKAGFKKV-Y-PVTGQTYSRKVDIDVLNALSSLGATAHKIATDIRLLAN-----LKEVEEPFEKGQIGSSAMPYKR 280 (436)
T ss_pred HHHHHHcCCCCC-C-CchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----CceecccccCCCCCcccCCCcc
Confidence 999999999973 2 33446899999999999999999999999999999995 8899998 4589999999999
Q ss_pred ChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhh
Q psy13008 330 NPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDS 409 (638)
Q Consensus 330 NP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~ 409 (638)
||+.+|+++++|+.+.|++.+++.....+++|+|...+...|..++++..+.+.++.++..++++|+||++||++|++.+
T Consensus 281 NPv~~E~i~~~a~~~~g~~~~~~~~~~~~~~Erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~ 360 (436)
T cd03302 281 NPMRSERCCSLARHLMNLASNAAQTASTQWFERTLDDSANRRIAIPEAFLAADAILITLQNISEGLVVYPKVIERHIRQE 360 (436)
T ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhc
Confidence 99999999999999999998888777778899988777778888999999999999999999999999999999999986
Q ss_pred hh--HH----HhcCC-CCCHHHHHHHHH----HHHHc------CCCHHHHHHHcCCC--CHHHHhhhcCcccccCC
Q psy13008 410 LM--LV----TALNP-HIGYDKAAEIAK----HAYKT------GITLKEAAVKLGYL--TEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 410 ~~--la----t~La~-~ig~~~Ah~iv~----~A~~~------g~~l~eal~~~~~L--s~eel~~llDP~~~vg~ 466 (638)
.. .+ ..|++ ++||++||++++ ++.++ |.+|.|++.++..+ +++||+++|||..|+|.
T Consensus 361 ~g~~~se~~~~~L~~~g~~~~~Ah~~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~dp~~~~g~ 436 (436)
T cd03302 361 LPFMATENIIMAAVKAGGDRQDAHERIRVLSHQAAAVVKQEGGDNDLIERIKNDAYFKPIWDELDALLDPKTFIGR 436 (436)
T ss_pred cChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHhcCCCcCCCHHHHHHHhCHHhhhCc
Confidence 43 32 24555 699999999876 45677 99999999976311 88999999999999984
No 33
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like. This group contains ASL, prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. These proteins are members of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP). pCMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone, in the beta-ketoadipate pathway. ASL deficiency has been linked t
Probab=100.00 E-value=3.7e-71 Score=599.33 Aligned_cols=359 Identities=25% Similarity=0.312 Sum_probs=312.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHh
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~l 122 (638)
++++++++|+++|.||+++|.+.| ||++++++|.++++.+.. +. +.-+.. ....++|+ ++ ++..+.+.+
T Consensus 6 s~~~~~~~~l~ve~A~a~~l~~~giip~~~a~~i~~~l~~~~~-d~-~~~~~~---~~~~~~~v-~~----~e~~L~~~~ 75 (381)
T cd01595 6 SEENKLRTWLDVEAALAEAQAELGLIPKEAAEEIRAAADVFEI-DA-ERIAEI---EKETGHDV-IA----FVYALAEKC 75 (381)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhcccC-CH-HHHHHH---HHHhCcCc-HH----HHHHHHHHh
Confidence 899999999999999999999999 999999999999987521 22 110011 11235554 55 888899999
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchh
Q psy13008 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (638)
Q Consensus 123 G~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G 202 (638)
|++.|+ |||+|+|||||++|+++|++|+.+. .+.+.|..++++|.++|++|+||+||||||+|||||||||
T Consensus 76 g~~~~~--------~vH~g~S~nDi~~Ta~~l~lr~~l~-~l~~~l~~l~~~L~~~A~~~~dt~m~grTH~Q~A~P~T~G 146 (381)
T cd01595 76 GEDAGE--------YVHFGATSQDINDTALALQLRDALD-IILPDLDALIDALAKLALEHKDTPMLGRTHGQHALPTTFG 146 (381)
T ss_pred hhHhhh--------HeecCcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCChHHhhcCCCCCcchhHH
Confidence 854554 5667999999999999999999876 6999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhh-hchhHHHHH
Q psy13008 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEAL-ASHDALVEV 281 (638)
Q Consensus 203 ~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~-~sRD~~~e~ 281 (638)
||+++|+++|.||++||.+++++++.+||||+ +||+.+..+ +++.+++++|++|||..+ .++|+ ++||+++|+
T Consensus 147 ~~~~~~~~~L~r~~~rL~~~~~~~~~~~lGga-~G~g~~~~~-~~~~~~~~~a~~LGl~~~----~~~~~~~~rd~~~e~ 220 (381)
T cd01595 147 KKFAVWAAELLRHLERLEEARERVLVGGISGA-VGTHASLGP-KGPEVEERVAEKLGLKVP----PITTQIEPRDRIAEL 220 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhcccH-hhhHhhcCC-cHHHHHHHHHHHcCCCCC----CCCCCcccchHHHHH
Confidence 99999999999999999999999999999995 587766543 678889999999999642 34454 599999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCcc
Q psy13008 282 SGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGH 359 (638)
Q Consensus 282 ~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~ 359 (638)
++++++++++|+|||+||++|+| +|||||.+|+ +++|||||||||||+.+|.++++++++.|++.+++... +++
T Consensus 221 ~~~l~~~~~~l~ria~Dl~~~~s---~e~gev~~~~~~~~~GSS~MPqK~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~ 296 (381)
T cd01595 221 LSALALIAGTLEKIATDIRLLQR---TEIGEVEEPFEKGQVGSSTMPHKRNPIDSENIEGLARLVRALAAPALENL-VQW 296 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---ccccceeccccCCCCCCccCCCcCCcHHHHHHHHHHHHHHHHHHHHHHhh-hHh
Confidence 99999999999999999999997 6999999996 38999999999999999999999999999998887655 788
Q ss_pred ccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhh------HHHhcCC-CCCHHHHHHHHHH
Q psy13008 360 FELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM------LVTALNP-HIGYDKAAEIAKH 431 (638)
Q Consensus 360 ~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~------lat~La~-~ig~~~Ah~iv~~ 431 (638)
+++|.+.+.+.|..++++..+..+++.++..++++|+||++||++++..+++ +++.|++ ++||++||+++++
T Consensus 297 ~erd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~~m~~~l~~~~g~~~ae~~~~~L~~~g~g~~~Ah~~v~~ 375 (381)
T cd01595 297 HERDLSDSSVERNILPDAFLLLDAALSRLQGLLEGLVVNPERMRRNLDLTWGLILSEAVMMALAKKGLGRQEAYELVKE 375 (381)
T ss_pred hccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccCHHHHHHHHHHHHHhCCCHhHHHHHHHH
Confidence 9999887777889999999999999999999999999999999999998663 2345656 4999999999876
No 34
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=100.00 E-value=5.1e-70 Score=622.52 Aligned_cols=420 Identities=19% Similarity=0.275 Sum_probs=351.6
Q ss_pred ChHHHHHHHHHHH-----HHHHHHHHHCC-CCHHHHHHHHHHHHHHHcC-ccccCCccccccccCCcccccchhhHHHHH
Q psy13008 44 MPEAIISAMGILK-----KAAAQVNKGFG-LDSKIADTISKAADEVISG-KLYEDHFPLSIWQTGSGTQTNMNVNEVISN 116 (638)
Q Consensus 44 ~~~~~i~a~l~ve-----~A~A~al~e~G-I~~e~a~~I~~al~~i~~~-~~~~~~f~~~~~~~~~~edi~~~vnevie~ 116 (638)
++...++.++.++ .||++||.+.| ||++++++|.+++.++... .. +..+.. ....+| +|++||+
T Consensus 20 ~~~~~~~~~l~~e~i~~~~A~a~~l~~~Giip~~~a~~I~~~l~~~~~~~~~-~~~~~~----~~~~ed----~h~~ie~ 90 (614)
T PRK12308 20 NDSLRFDYRLAEQDIVGSIAWSKALLSVGVLSEEEQQKLELALNELKLEVME-DPEQIL----LSDAED----IHSWVEQ 90 (614)
T ss_pred hcCHHHHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCC----CCcccc----HHHHHHH
Confidence 4567788888888 99999999999 9999999999999886321 01 111111 124566 4555999
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC
Q psy13008 117 RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDA 196 (638)
Q Consensus 117 ~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~A 196 (638)
.|++.+| +.|+ |||+|+|||||++|+++|++|+.+. .|.+.|.+++++|.++|++|++|+||||||+|||
T Consensus 91 ~L~~~~g-~~~~--------~iH~g~S~nD~~~Ta~~L~~r~~~~-~l~~~l~~l~~~l~~~a~~~~~t~m~grTH~Q~A 160 (614)
T PRK12308 91 QLIGKVG-DLGK--------KLHTGRSRNDQVATDLKLWCRQQGQ-QLLLALDQLQQQMVNVAERHQGTVLPGYTHLQRA 160 (614)
T ss_pred HHHHHhc-cccc--------ceecCCChhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCEeecCcCCccc
Confidence 9999998 5655 4566999999999999999999875 5999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhch
Q psy13008 197 TPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASH 275 (638)
Q Consensus 197 qPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sR 275 (638)
||||||||+++|+++|.||++||.+++++++.+|||||++ ||+++.++ +++|+.|||.. +..|++|++++|
T Consensus 161 ~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~plGgga~agt~~~~~r-------~~~a~~LG~~~-~~~n~~da~~~r 232 (614)
T PRK12308 161 QPVTFAHWCLAYVEMFERDYSRLEDALTRLDTCPLGSGALAGTAYPIDR-------EALAHNLGFRR-ATRNSLDSVSDR 232 (614)
T ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhccccCCCCCCCH-------HHHHHHhCCCC-CcCCHHHHHcCc
Confidence 9999999999999999999999999999999999999987 89877775 47999999996 678999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHh-
Q psy13008 276 DALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTV- 353 (638)
Q Consensus 276 D~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~- 353 (638)
|+++++++++++++++|+|||+||++|+| +|||++++++. ++|||||||||||+.+|+++++++++.|++.+++.
T Consensus 233 d~~~e~~~~l~~~~~~l~ria~Dl~~~ss---~e~g~~el~~~~~~gSSiMPqK~NP~~~E~i~~~a~~~~g~~~~~~~~ 309 (614)
T PRK12308 233 DHVMELMSVASISMLHLSRLAEDLIFYNS---GESGFIELADTVTSGSSLMPQKKNPDALELIRGKTGRVYGALAGMMMT 309 (614)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCcCCEEeCccCCCccccCcCccCCcHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999997 58998888865 79999999999999999999999999999988873
Q ss_pred -cccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHhcC----C-CCCHHHHHH
Q psy13008 354 -GGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN----P-HIGYDKAAE 427 (638)
Q Consensus 354 -~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La----~-~ig~~~Ah~ 427 (638)
.+.+.+++++.+.+ ...+++.+..+ ..++.++..++++|+||++||++|+..++.++++++ . ++||++||+
T Consensus 310 ~~~~~~~~~rd~~~~--~~~l~~~~~~~-~~~l~~~~~~l~~l~v~~~rm~~~~~~g~~~a~~la~~L~~~g~~~r~Ah~ 386 (614)
T PRK12308 310 VKALPLAYNKDMQED--KEGLFDALDTW-NDCMEMAALCFDGIKVNGERTLEAAKQGYANATELADYLVAKGIPFREAHH 386 (614)
T ss_pred HcCCchhhccchhhh--HHHHHHHHHHH-HHHHHHHHHHhCcCEECHHHHHHHHHcCHHHHHHHHHHHHHcCCCHHHHHH
Confidence 55666777775443 12344444544 456668899999999999999999988888887664 3 699999999
Q ss_pred HHHH----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhhHHHHHhhhcCCCCCCCCC
Q psy13008 428 IAKH----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVLPPWSRP 503 (638)
Q Consensus 428 iv~~----A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~~v~~~~~~~~~~~~~~~~ 503 (638)
++++ +.++|+++.+ +..++++.+ ...+++++.. +.+.+++|+.+...||++|....-
T Consensus 387 ~v~~~v~~a~~~g~~l~~-------~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~v~~ 447 (614)
T PRK12308 387 IVGVAVVGAIAKGCALEE-------LSLEQLKEF-----------SDVIEDDVYQ-ILTIESCLEKRCALGGVSPEQVAY 447 (614)
T ss_pred HHHHHHHHHHHcCCChhh-------CCHHHHHHh-----------hhhhhHHHHH-hCCHHHHHHhccCCCCCCHHHHHH
Confidence 8765 6788999887 666666554 3335667777 788888999999999999988877
Q ss_pred CchhhhhcccCC
Q psy13008 504 SCPQARSIIRGR 515 (638)
Q Consensus 504 ~~~~~~~~~~~~ 515 (638)
...++++.+..+
T Consensus 448 ~~~~~~~~l~~~ 459 (614)
T PRK12308 448 AVEQADKRLAAR 459 (614)
T ss_pred HHHHHHHHhcCC
Confidence 777777776544
No 35
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1. This subgroup contains bacterial and archeal proteins similar to ASL, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two steps in the de novo purine biosynthesis: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and, the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=6.6e-70 Score=590.29 Aligned_cols=364 Identities=22% Similarity=0.309 Sum_probs=309.7
Q ss_pred CCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccC
Q psy13008 23 YYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTG 101 (638)
Q Consensus 23 ~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~ 101 (638)
+||+.+++++| ++++++++|++||.||+++|.+.| ||++++++|.++++...+ +. . .. ...
T Consensus 1 ~~~~~~~~~~f----------s~~~~~~~~l~ve~A~a~~l~~~Glip~~~a~~I~~~l~~~~~-~~-~-~~-----~~~ 62 (387)
T cd01360 1 RYGRPEMKKIW----------SEENKFRKWLEVEAAVCEAWAKLGVIPAEAAEEIRKKAKFDVE-RV-K-EI-----EAE 62 (387)
T ss_pred CCCchHHHHHh----------CHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhhcCHH-HH-H-HH-----HHH
Confidence 69999999999 899999999999999999999999 999999999999864321 11 0 00 011
Q ss_pred CcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 102 SGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQE 181 (638)
Q Consensus 102 ~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~ 181 (638)
.++|+ ++ ++..|.+.+|+ .|+ |||+|+|||||++|+++|++|+.+. .+.+.|.+++++|.++|++
T Consensus 63 ~~~dv-~~----~e~~L~~~~g~-~~~--------~lH~G~S~nDi~~ta~~L~lr~~l~-~l~~~l~~l~~~L~~~A~~ 127 (387)
T cd01360 63 TKHDV-IA----FVTAIAEYCGE-AGR--------YIHFGLTSSDVVDTALALQLREALD-IILKDLKELLEVLKKKALE 127 (387)
T ss_pred hCCCh-HH----HHHHHHHHHHH-hhh--------heeCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 34443 33 67778888873 444 5667999999999999999999875 5999999999999999999
Q ss_pred hcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCCC
Q psy13008 182 FQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLP 261 (638)
Q Consensus 182 ~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl~ 261 (638)
|+||+||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||+.+.+ ..++++++++|||+
T Consensus 128 ~~~t~m~grTH~Q~A~P~TfG~~l~~~~~~L~r~~~rL~~~~~~~~~~~lgga-~Gt~~~~~----~~~~~~~a~~LG~~ 202 (387)
T cd01360 128 HKDTVMVGRTHGIHAEPTTFGLKFALWYAEFKRHLERLKEARERILVGKISGA-VGTYANLG----PEVEERVAEKLGLK 202 (387)
T ss_pred hCCCeeehhhcCCcceeehHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccchH-hhcCccCC----HHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999985 68876653 34678999999999
Q ss_pred CCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHHHHH
Q psy13008 262 FKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTM 339 (638)
Q Consensus 262 ~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ir~ 339 (638)
.++..| ++++||+++|+++++++++++|+|||+||++|++ +|||||.+|. +++|||+|||||||+.+|++++
T Consensus 203 ~~~~~~---~~~~rD~~~e~~~~la~~~~~L~ria~Dl~~~s~---~e~gel~e~~~~~~~GSS~MPqKrNP~~~E~i~~ 276 (387)
T cd01360 203 PEPIST---QVIQRDRHAEYLSTLALIASTLEKIATEIRHLQR---TEVLEVEEPFSKGQKGSSAMPHKRNPILSENICG 276 (387)
T ss_pred CCCCCC---cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccccceecCCCCCCCCcCCCCCCCCCHHHHHHHH
Confidence 754433 6799999999999999999999999999999996 6999999884 5799999999999999999999
Q ss_pred HHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhh--hhhHHHhc-
Q psy13008 340 VAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVND--SLMLVTAL- 416 (638)
Q Consensus 340 ~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~--~~~lat~L- 416 (638)
+++.+.|....+ +.+.+.+++++...+...|..++.+......++..+..++++|+||++||++++.. .+.+++++
T Consensus 277 ~a~~~~g~~~~~-~~~~~~~~~rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~l~~~~~~~~ae~la 355 (387)
T cd01360 277 LARVIRSNVIPA-LENVALWHERDISHSSVERVILPDATILLDYILRRMTRVLENLVVYPENMRRNLNLTKGLIFSQRVL 355 (387)
T ss_pred HHHHHHHHHHHH-HhhhHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHH
Confidence 999999998644 44455567777655544577888888888888889999999999999999999986 55555544
Q ss_pred ---CC-CCCHHHHHHHHHH
Q psy13008 417 ---NP-HIGYDKAAEIAKH 431 (638)
Q Consensus 417 ---a~-~ig~~~Ah~iv~~ 431 (638)
+. ++||++||+++++
T Consensus 356 ~~L~~~g~~~r~Ah~~V~~ 374 (387)
T cd01360 356 LALVEKGMSREEAYEIVQR 374 (387)
T ss_pred HHHHHcCCCHHHHHHHHHH
Confidence 34 6999999999987
No 36
>PRK02186 argininosuccinate lyase; Provisional
Probab=100.00 E-value=8e-70 Score=643.85 Aligned_cols=430 Identities=17% Similarity=0.200 Sum_probs=351.6
Q ss_pred CCCc-hHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccc
Q psy13008 22 KYYG-AQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQ 99 (638)
Q Consensus 22 ~~yg-~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~ 99 (638)
.+|+ .+++++++.=+... ..++++++.|++++.||++||.++| ||++++++|.+++.++.+... ..+..+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~Ah~~~l~~~gii~~~~a~~I~~~l~~~~~~~~--~~~~~~--- 484 (887)
T PRK02186 413 ARPGLPPEAQAIVYGPGAS---EAPLAELDHLAAIDEAHLVMLGDTGIVAPERARPLLDAHRRLRDAGF--APLLAR--- 484 (887)
T ss_pred cccCCChhhhceecCCCcc---hhhhhhhHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHhHH--hhCcCC---
Confidence 4555 67888888322222 2578999999999999999999999 999999999999987743222 223322
Q ss_pred cCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 100 TGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKS 179 (638)
Q Consensus 100 ~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA 179 (638)
...+|+|++ +|++|++.+|++.|+| +|+|||||||++|+++|++|+.+. .|.+.|..|+++|.++|
T Consensus 485 -~~~~~~~~~----~e~~L~~~~g~~~~~~--------lH~grSrnD~v~T~~~l~lr~~~~-~l~~~l~~l~~~L~~~A 550 (887)
T PRK02186 485 -PAPRGLYML----YEAYLIERLGEDVGGV--------LQTARSRNDINATTTKLHLREATS-RAFDALWRLRRALVFKA 550 (887)
T ss_pred -CCCcchHHH----HHHHHHHHhChhhhcc--------cCccccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 245678887 9999999998556664 456999999999999999999976 59999999999999999
Q ss_pred HHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHHHHHHHHHc
Q psy13008 180 QEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 180 ~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v~~~lA~~L 258 (638)
++|+||+||||||+|||||||||||+++|+++|.||++||.++++|++.+||||||. ||++++++ +++|++|
T Consensus 551 ~~~~~~~m~g~TH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~r~~~~plG~aag~gt~~~~~~-------~~~a~~L 623 (887)
T PRK02186 551 SANVDCALPIYSQYQPALPGSLGHYLLAVDGALARETHALFALFEHIDVCPLGAGAGGGTTFPIDP-------EFVARLL 623 (887)
T ss_pred HHcCCCEeecCccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCcccccccCCCCCCCH-------HHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999884 88888876 4689999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEAL 337 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~i 337 (638)
||+. +..|++||+++||+++|+++++++++++|+|||+||++|+| +|||||.+|+. ++|||||||||||+.+|++
T Consensus 624 Gf~~-~~~n~~da~~~rd~~~e~~~~l~~~~~~l~ria~Dl~~~~~---~e~g~i~~~~~~~~gSSiMPqKrNP~~~E~i 699 (887)
T PRK02186 624 GFEQ-PAPNSLDAVASRDGVLHFLSAMAAISTVLSRLAQDLQLWTT---REFALVSLPDALTGGSSMLPQKKNPFLLEFV 699 (887)
T ss_pred CCCC-CccCHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CCCCcEECCCccccccCCCCCCCCCcHHHHH
Confidence 9996 78899999999999999999999999999999999999997 69999999985 7999999999999999999
Q ss_pred HHHHHHHhccHHHHHhcccCcccccccc--chhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHh
Q psy13008 338 TMVAAQVMGNHVAVTVGGSNGHFELNVF--KPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTA 415 (638)
Q Consensus 338 r~~a~~v~G~~~~~~~~~~~~~~e~~~~--~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~ 415 (638)
|++++++.|++.+++....+.+++++.. ... ...+++++..+. .++.++..++++|+||++||++++..+++++|+
T Consensus 700 r~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~-~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~at~ 777 (887)
T PRK02186 700 KGRAGVVAGALASASAALGKTPFSNSFEAGSPM-NGPIAQACAAIE-DAAAVLVLLIDGLEADQARMRAHLEDGGVSATA 777 (887)
T ss_pred HHHHHHHhhHHHHHHHHHccCCcccccchhhhh-HHHHHHHHHHHH-HHHHHHHHHHhhCEECHHHHHHHHhcCcchHHH
Confidence 9999999999988875544455554322 111 234555555555 455577799999999999999999999888887
Q ss_pred cC----C--CCCHHHHHHHHHH----HHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhh
Q psy13008 416 LN----P--HIGYDKAAEIAKH----AYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEK 485 (638)
Q Consensus 416 La----~--~ig~~~Ah~iv~~----A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~ 485 (638)
++ . ++|||+||+++++ +.++|.++.+.+.+ +... +..++ .+.
T Consensus 778 la~~L~~~~g~~fr~Ah~~v~~~v~~~~~~~~~~~~~~~~--------~~~~--------------~~~~~------~~~ 829 (887)
T PRK02186 778 VAESLVVRRSISFRSAHTQVGQAIRQSLDQGRSSADALAA--------LDPQ--------------FVSRA------PLE 829 (887)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHhcCCcccchHHH--------hhhh--------------hccch------HHH
Confidence 64 3 6999999999875 45666665543222 1110 22222 445
Q ss_pred HHHHHhhhcCCCCCCCCCCchhhhhcccC
Q psy13008 486 VISQQILAAKVLPPWSRPSCPQARSIIRG 514 (638)
Q Consensus 486 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (638)
+++.+...||+.|...+....++++....
T Consensus 830 ~~~~r~~~gg~~~~~v~~~~~~~~~~l~~ 858 (887)
T PRK02186 830 WARSHRFGGGPGAADLNAGLARACAALRD 858 (887)
T ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 77899999999999887777777666443
No 37
>PRK06389 argininosuccinate lyase; Provisional
Probab=100.00 E-value=4.1e-67 Score=569.40 Aligned_cols=353 Identities=16% Similarity=0.127 Sum_probs=304.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHh
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEML 122 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~l 122 (638)
.|.+.+...+.+.+||+.||.+.| ||++++.+|.++++++.++. |+++ ...||+|++ ||++|++++
T Consensus 27 ~D~~l~~~di~~~~AH~~mL~~~gii~~~e~~~i~~~L~~i~~~~-----~~~~----~~~EDvh~~----iE~~L~~~~ 93 (434)
T PRK06389 27 ADKNLIKYEIINLLAYHVALAQRRLITEKAPKCVINALIDIYKNG-----IEID----LDLEDVHTA----IENFVIRRC 93 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHCCCCCHHHHHHHHHHHHHHHcCC-----CcCC----CCCCchHHH----HHHHHHHHh
Confidence 578889999999999999999999 99999999999999986643 3443 257898888 999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchh
Q psy13008 123 GGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLG 202 (638)
Q Consensus 123 G~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G 202 (638)
| +.||++ |+ |||||||+.|++|||+|+++.+ +...|.+++++|+++ |.|++||||||+|||||+|||
T Consensus 94 G-~~gg~l--ht------gRSRNDqvat~~RL~~r~~~~~-~~~~l~~l~~~l~~~---~~dtimpGyTHlQ~AqP~TfG 160 (434)
T PRK06389 94 G-DMFKNF--RL------FLSRNEQVHADLNLFIIDKIIE-IEKILYEIIKVIPGF---NLKGRLPGYTHFRQAMPMTVN 160 (434)
T ss_pred c-hhhhhh--cc------cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---ccCceeccccccCcCcchhHH
Confidence 9 688875 65 9999999999999999999886 999999999999964 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhcCCcccc-ccCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhH-HHH
Q psy13008 203 QEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTA-VGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDA-LVE 280 (638)
Q Consensus 203 ~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaA-vGT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~-~~e 280 (638)
||+++|+++|.||++||.+++++++.+|||+|+ +||++++++ +++|++|||+. +..|+++++.+||+ +++
T Consensus 161 ~~l~a~a~~L~rd~~RL~~~~~r~~~~pLGaga~~Gt~~~idr-------~~~A~lLGf~~-~~~n~~~a~~~~~~~~~e 232 (434)
T PRK06389 161 TYINYIKSILYHHINNLDSFLMDLREMPYGYGSGYGSPSSVKF-------NQMSELLGMEK-NIKNPVYSSSLYIKTIEN 232 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhcCCchhhH-------HHHHHHhCCCC-CCCCCchhhhccchHHHH
Confidence 999999999999999999999999999998666 499888865 57999999998 67888887777665 889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHh--cccC
Q psy13008 281 VSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTV--GGSN 357 (638)
Q Consensus 281 ~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~--~~~~ 357 (638)
+++++++++++|+|||+||++|+| + |++++|+. ++|||||||||||+.+|.+|++|+++.|.+.++.. .+.+
T Consensus 233 ~~~~la~la~~LsRiA~Dl~l~ss---~--g~ielpd~~~~GSSiMPqKrNP~~~E~ir~~a~~v~g~~~~~~~~~~n~~ 307 (434)
T PRK06389 233 ISYLISSLAVDLSRICQDIIIYYE---N--GIITIPDEFTTGSSLMPNKRNPDYLELFQGIAAESISVLSFIAQSELNKT 307 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC---C--CEEEecCCCCCCCCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999997 2 78889976 89999999999999999999999999999988863 4555
Q ss_pred ccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHHhcC-----CCCCHHHHHHHHHHH
Q psy13008 358 GHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVTALN-----PHIGYDKAAEIAKHA 432 (638)
Q Consensus 358 ~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat~La-----~~ig~~~Ah~iv~~A 432 (638)
..|.++.+.. ...+++.++.+.++ +.++..++++++||+++ ++++. ++.+||++| .+++||+||++|+++
T Consensus 308 ~~y~~D~q~~--~~~~~~~~~~~~~~-l~l~~~~i~~l~~~~~~-~~a~~-~~~~ATdlA~~lv~~GipFR~AH~~Vg~~ 382 (434)
T PRK06389 308 TGYHRDFQIV--KDSTISFINNFERI-LLGLPDLLYNIKFEITN-EKNIK-NSVYATYNAWLAFKNGMDWKSAYAYIGNK 382 (434)
T ss_pred chhhHHHHHH--HHHHHHHHHHHHHH-HHHHHHHHHhCeECHHH-Hhhcc-CCCcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5566554432 35677777877765 44677999999999999 55554 445588775 479999999999999
Q ss_pred HHcCCCHH
Q psy13008 433 YKTGITLK 440 (638)
Q Consensus 433 ~~~g~~l~ 440 (638)
++++.-+.
T Consensus 383 V~~~~~~~ 390 (434)
T PRK06389 383 IREGEVLD 390 (434)
T ss_pred HHhccchh
Confidence 88887654
No 38
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase. Members of this family are 3-carboxy-cis,cis-muconate cycloisomerase, the enzyme the catalyzes the second step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=2.1e-66 Score=553.58 Aligned_cols=336 Identities=23% Similarity=0.250 Sum_probs=290.5
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~ 98 (638)
++.+||+++|+++| +|++++++|++||+||++||.++| ||++++++|.++|+++.. +. .
T Consensus 2 ~~~~~~~~~~~~i~----------sd~~~i~~~~~ve~A~a~al~~~Gii~~~~a~~I~~a~~~~~~-d~---------~ 61 (338)
T TIGR02426 2 LDGLFGDPAALELF----------SDRAFLRAMLDFEAALARAQADAGLIPAEAAAAIEAACAAAAP-DL---------E 61 (338)
T ss_pred CccccCCHHHHHHc----------CCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhccCCC-CH---------H
Confidence 35799999999999 899999999999999999999999 999999999999987521 11 1
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
+.+.++..+.+..-.++..+.+.+|++.|+ |||+||||||+++|+++|++|+.+. .+.+.|.+++++|.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~g~--------~vH~G~S~nD~~~Ta~~L~lr~~l~-~l~~~l~~l~~~L~~~ 132 (338)
T TIGR02426 62 ALAHAAATAGNPVIPLVKALRKAVAGEAAR--------YVHRGATSQDVIDTSLMLQLRDALD-LLLADLGRLADALADL 132 (338)
T ss_pred HHHhHHHhcCCcHHHHHHHHHHHhCccccC--------cccCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 111111111122113667778889865554 5667999999999999999999875 5999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+|++||||||+|||||||||||+++|+++|.||++||.+++++++.+||||+ +||+.+. ++++..+++++++.|
T Consensus 133 A~~~~~~~m~grTH~Q~A~P~T~G~~l~~~~~~l~r~~~rL~~~~~~~~~~~lGga-vGtg~~~-~~~~~~v~~~~a~~L 210 (338)
T TIGR02426 133 AARHRDTPMTGRTLLQQAVPTTFGLKAAGWLAAVLRARDRLAALRTRALPLQFGGA-AGTLAAL-GTRGGAVAAALAARL 210 (338)
T ss_pred HHHhCCCceecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhHhcCCcch-hccCCCc-cchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999995 6887554 457778899999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCCCCCCChhHHHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALT 338 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~lE~ir 338 (638)
||+.+ ..+ |+++||+++|+++++++++++|+|||+||++|++ +||||+.++ .++|||||||||||+.+|.++
T Consensus 211 Gl~~~-~~~---~~~~rd~~~e~~~~l~~la~~l~ria~Dl~l~s~---~e~gei~~~-~~~GSSiMPqK~NP~~~E~i~ 282 (338)
T TIGR02426 211 GLPLP-ALP---WHTQRDRIAEFGSALALVAGALGKIAGDIALLSQ---TEVGEVFEA-GGGGSSAMPHKRNPVGAALLA 282 (338)
T ss_pred CcCCC-CCc---chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCChhhhC-CCCCcccCCCCCCcHHHHHHH
Confidence 99974 333 6899999999999999999999999999999995 699999884 479999999999999999999
Q ss_pred HHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhcc
Q psy13008 339 MVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGI 395 (638)
Q Consensus 339 ~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L 395 (638)
++|+++.|...+++.. ...++|++...+...|.++|++++++++++..+..++++|
T Consensus 283 ~~a~~~~g~~~~~~~~-~~~~~Er~~~~~~~e~~~lp~~~~~~~~~l~~~~~~l~~l 338 (338)
T TIGR02426 283 AAARRVPGLAATLHAA-LPQEHERSLGGWHAEWETLPELVRLTGGALRQAQVLAEGL 338 (338)
T ss_pred HHHHHHHHHHHHHHHh-chHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999877544 6678888877777789999999999999999999998875
No 39
>PRK09285 adenylosuccinate lyase; Provisional
Probab=100.00 E-value=2.9e-66 Score=570.49 Aligned_cols=415 Identities=17% Similarity=0.153 Sum_probs=325.0
Q ss_pred ccCCCCCCch--HhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-C---CHHHHHH---HHHHHHHHHcCc
Q psy13008 17 EVPNDKYYGA--QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-L---DSKIADT---ISKAADEVISGK 87 (638)
Q Consensus 17 ~~P~~~~yg~--~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I---~~e~a~~---I~~al~~i~~~~ 87 (638)
..|++.+|+. .+|+.+| ++++++++|+++|.|+++++++.| + |+..++. |.+.+.++..+.
T Consensus 9 ~~p~~~ry~~~~~e~~~~~----------s~~~~~~~~l~vE~A~a~a~a~~g~~~~ip~~~~~~~~~i~~~~~~~~~~d 78 (456)
T PRK09285 9 LSPLDGRYASKTAALRPIF----------SEFGLIRYRVQVEVEWLIALAAHPGIPEVPPFSAEANAFLRAIVENFSEED 78 (456)
T ss_pred CCCCccccCCCCHHHHHHh----------CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhhCccc
Confidence 5789999999 8999999 789999999999999999999997 4 5555555 777663331111
Q ss_pred cccCCccccc-cccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHH-HH
Q psy13008 88 LYEDHFPLSI-WQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNR-LL 165 (638)
Q Consensus 88 ~~~~~f~~~~-~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~-L~ 165 (638)
+ .... .....++|+ ++ ++..+.+.+|. .++ + ...+.|||+|+|||||+||+++|++|+.+ .. |.
T Consensus 79 ~-----~~i~~~e~~~~hdv-~a----~~~~l~~~~~~-~~~-~-~~~~~~vH~G~Ts~Di~dTa~~L~lr~~l-~~~l~ 144 (456)
T PRK09285 79 A-----ARIKEIERTTNHDV-KA----VEYFLKEKLAG-LPE-L-EAVSEFIHFACTSEDINNLSHALMLKEAR-EEVLL 144 (456)
T ss_pred H-----HHHHHHHHHhCCCh-HH----HHHHHHHHhcc-cCc-c-hhHHhHccCCCChhhHHHHHHHHHHHHHH-HHHHH
Confidence 1 1110 001112221 33 67778888872 110 0 01134677899999999999999999986 45 89
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCC-CCC--
Q psy13008 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTG-LNT-- 242 (638)
Q Consensus 166 ~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~-~~~-- 242 (638)
+.|..++++|.++|++|+||+|+||||+|||||||||||+++|+++|.|+++||.++ ...+++|| |+||. .+.
T Consensus 145 ~~L~~l~~~L~~lA~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~---~~~g~~~G-AvGt~~a~~~~ 220 (456)
T PRK09285 145 PALRELIDALKELAHEYADVPMLSRTHGQPATPTTLGKEMANVAYRLERQLKQLEAV---EILGKING-AVGNYNAHLAA 220 (456)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeeceecCCCCeeehHHHHHHHHHHHHHHHHHHHHHH---HHhhhccc-ccccHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999 45677777 47884 221
Q ss_pred -CchhhHHHHHHHHHHcCCCCCCCCCchhh-hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCC
Q psy13008 243 -YVGFAENCTQRISELTGLPFKSAPNKFEA-LASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEP 320 (638)
Q Consensus 243 -d~~~~~~v~~~lA~~LGl~~~~~~ns~da-~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~ 320 (638)
+...+..+.+.+++.|||..+ +++| +++||++++++++++.++++|+|||+||++|++ ..|++|. .+.+++
T Consensus 221 ~~~~~~~~v~~~~~~~LGL~~~----~~~~~v~~rD~~~e~~~~la~~a~~L~kia~Di~ll~~--~~e~~e~-~~~~~~ 293 (456)
T PRK09285 221 YPEVDWHAFSREFVESLGLTWN----PYTTQIEPHDYIAELFDAVARFNTILIDLDRDVWGYIS--LGYFKQK-TKAGEI 293 (456)
T ss_pred cCCccHHHHHHHHHHHhCCCCC----CCccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chhhhcc-CCCCCC
Confidence 111135678888899999753 3445 699999999999999999999999999999996 2344442 234699
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChH
Q psy13008 321 GSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNED 400 (638)
Q Consensus 321 GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~e 400 (638)
|||+|||||||+.+|+++++++.+.+....++......++|++...+...|.+ +.+..+...++..+..++++|+||++
T Consensus 294 GSS~MPhKrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~~l~~~~~~l~~L~V~~~ 372 (456)
T PRK09285 294 GSSTMPHKVNPIDFENSEGNLGLANALLEHLAAKLPISRWQRDLTDSTVLRNL-GVAFGYSLIAYDSLLKGLGKLEVNEA 372 (456)
T ss_pred CCCCCCCCcCchHHHHHHHHHHHHHHHHHHHHhhccHHhhCCcCchhhhhcch-HHHHHHHHHHHHHHHHHHccCEECHH
Confidence 99999999999999999999999998776665443345677776655556777 88888888889899999999999999
Q ss_pred HHHHhhhhhhhHHH-----hcCCCCCHHHHHHHHHH----HHHcCCCHHHH---HHHcCCCCHHHHhhhcCcccccCCCC
Q psy13008 401 TIAKHVNDSLMLVT-----ALNPHIGYDKAAEIAKH----AYKTGITLKEA---AVKLGYLTEQEYDQWVKPEKMLGPEY 468 (638)
Q Consensus 401 rm~~~l~~~~~lat-----~La~~ig~~~Ah~iv~~----A~~~g~~l~ea---l~~~~~Ls~eel~~llDP~~~vg~a~ 468 (638)
||++|+..++++.+ .|++ +|+++||+++.+ +.++|.+|+|+ +.+...++ ++| .+|||..|+|.+.
T Consensus 373 rm~~nl~~~~~~~sE~~~~~l~~-~gr~~A~~~v~~~~~~~~~~~~~~~e~~~~l~~~~~~~-~~l-~~~~p~~ylg~a~ 449 (456)
T PRK09285 373 RLAEDLDANWEVLAEPIQTVMRR-YGIENPYEKLKELTRGKRITAEALREFIDGLDLPEEAK-ARL-KALTPANYIGLAA 449 (456)
T ss_pred HHHHHHHhcCcchHHHHHHHHHH-hChHhHHHHHHHHHHHHHhccCCHHHHHHHhcCCHhHH-HHH-HcCCHHHHHhhHH
Confidence 99999988777543 4566 999999998764 56889999998 65544344 789 9999999999876
Q ss_pred CC
Q psy13008 469 HP 470 (638)
Q Consensus 469 ~~ 470 (638)
.+
T Consensus 450 ~~ 451 (456)
T PRK09285 450 EL 451 (456)
T ss_pred HH
Confidence 53
No 40
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions. The Lyase class I family contains class II fumarase, aspartase, adenylosuccinate lyase (ASL), argininosuccinate lyase (ASAL), prokaryotic-type 3-carboxy-cis,cis-muconate cycloisomerase (pCMLE), and related proteins. It belongs to the Lyase_I superfamily. Proteins of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits.
Probab=100.00 E-value=5.2e-65 Score=540.65 Aligned_cols=323 Identities=38% Similarity=0.515 Sum_probs=274.1
Q ss_pred HHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHHHHHHHhccCCC
Q psy13008 49 ISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLG 127 (638)
Q Consensus 49 i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g 127 (638)
+++|+++|+||++||.++| ||+++++.|.++|.++..+.. +.. ....+.+++.|++ +++.+.+.+|++.|
T Consensus 1 ~~~~l~ve~A~a~al~~~Gli~~~~a~~I~~~l~~~~~~~~-~~~----~~~~~~~~~~~~~----~e~~l~~~~g~~~~ 71 (325)
T cd01334 1 IRADLQVEKAHAKALAELGLLPKEAAEAILAALDEILEGIA-ADQ----VEQEGSGTHDVMA----VEEVLAERAGELNG 71 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHhCcc-ccC----eeeCCCCccHHHH----HHHHHHHHhccccC
Confidence 4678999999999999999 999999999999998754211 111 1234567888888 77777788885434
Q ss_pred CCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHH
Q psy13008 128 SKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSG 207 (638)
Q Consensus 128 ~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~ 207 (638)
+|||+|+||||+++|+++|++|+.+. .+.+.|.+++++|.++|++|+||+||||||+|||||||||||+++
T Consensus 72 --------~~lH~G~S~nDi~~ta~~l~lr~~~~-~l~~~l~~l~~~L~~~A~~~~~t~m~grTH~Q~A~P~T~G~~~~~ 142 (325)
T cd01334 72 --------GYVHTGRSSNDIVDTALRLALRDALD-ILLPALKALIDALAAKAEEHKDTVMPGRTHLQDAQPTTLGHELAA 142 (325)
T ss_pred --------CCCccCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHccCcEeecccccccCccccHHHHHHH
Confidence 46677999999999999999999876 599999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHH
Q psy13008 208 YVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNT 287 (638)
Q Consensus 208 ~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~ 287 (638)
|+++|.||++||.+++++++.+|||+||+||+...+ ..+++++|+.|||.. +..|+++++++||+++|++++++.
T Consensus 143 ~~~~l~r~~~rL~~~~~~~~~~~lG~gA~g~~~~~~----~~~~~~~a~~LG~~~-~~~~~~~a~~~rd~~~e~~~~l~~ 217 (325)
T cd01334 143 WAAELERDLERLEEALKRLNVLPLGGGAVGTGANAP----PIDRERVAELLGFFG-PAPNSTQAVSDRDFLVELLSALAL 217 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcHhHHhCcCCCC----cchHHHHHHHhcCcC-cCcCHHHHHhCcHHHHHHHHHHHH
Confidence 999999999999999999999999977886644432 334578999999965 678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCcceeEEcCCC-CCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccc
Q psy13008 288 VAVSLMKIANDIRFLGSGPRSGLGELKLPEN-EPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFK 366 (638)
Q Consensus 288 la~~LsRiA~DL~llsS~pr~E~gev~lp~~-~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~ 366 (638)
++++|+|||+|+++|+| +|||||.+|+. ++|||+|||||||+.+|.++++++++.|...+++....+.+++.+...
T Consensus 218 ~~~~l~ria~Dl~~~~~---~e~gev~~~~~~~~gSS~MP~KrNP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~~~~ 294 (325)
T cd01334 218 LAVSLSKIANDLRLLSS---GEFGEVELPDAKQPGSSIMPQKVNPVILELVRGLAGRVIGNLAALLEALKGGPLEDNVDS 294 (325)
T ss_pred HHHHHHHHHHHHHHHcC---CCCCeEECCCCCCCCcccCCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHhcCchhhhccc
Confidence 99999999999999997 69999999986 899999999999999999999999999999888766555555433222
Q ss_pred hhHHhhHHHHHHHHHHHHHHHHHHhhhccccC
Q psy13008 367 PLIVSNVLRSIRLLADTTESFTTKCVTGILPN 398 (638)
Q Consensus 367 ~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn 398 (638)
.. .+..++.+......++..+..++++|+||
T Consensus 295 ~~-~~~~l~~~~~~~~~~l~~~~~~~~~l~v~ 325 (325)
T cd01334 295 PV-EREALPDSFDLLDAALRLLTGVLEGLEVN 325 (325)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhCcCEeC
Confidence 22 35556666666666677888899999987
No 41
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
Probab=100.00 E-value=4.3e-64 Score=537.71 Aligned_cols=336 Identities=21% Similarity=0.255 Sum_probs=287.5
Q ss_pred CCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHcCccccCCcccccc
Q psy13008 20 NDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVISGKLYEDHFPLSIW 98 (638)
Q Consensus 20 ~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~~~~~~~~f~~~~~ 98 (638)
++.+||.++|+++| ++++++++|++||+|+|++|.++| ||++++++|.++|+++.. +. ..+....
T Consensus 11 ~~~~~~~~~~~~~~----------s~~~~i~a~l~vE~A~a~a~~~~G~Ip~~~a~~I~~a~~~~~~-d~--~~~~~~~- 76 (351)
T PRK05975 11 LSGLFGDDEIAALF----------SAEADIAAMLAFEAALAEAEAEHGIIPAEAAERIAAACETFEP-DL--AALRHAT- 76 (351)
T ss_pred hhccCCCHHHHHHc----------CcHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCC-CH--HHHhhHH-
Confidence 55699999999999 899999999999999999999999 999999999999976421 11 0010000
Q ss_pred ccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 99 QTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKK 178 (638)
Q Consensus 99 ~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~l 178 (638)
...+ +++++++ +.+.+.+|++. ++|||+|+||||++||+++|++|+.+ ..|.+.|..++++|.++
T Consensus 77 -~~~g----~~v~~~v-~~l~~~~g~~~--------~~~vH~G~TsnDi~dTa~~L~lr~~l-~~l~~~L~~l~~~L~~l 141 (351)
T PRK05975 77 -ARDG----VVVPALV-RQLRAAVGEEA--------AAHVHFGATSQDVIDTSLMLRLKAAS-EILAARLGALIARLDAL 141 (351)
T ss_pred -HhcC----CcHHHHH-HHHHHHhCchh--------hCcccCCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 0011 3455544 45667777443 35778899999999999999999987 46999999999999999
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHc
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELT 258 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~L 258 (638)
|++|+||+|+||||+|||||||||||+++|+++|.|+++||.+++++++.+||||+ +||+.+. +++...+++++|++|
T Consensus 142 A~~~~~t~m~grTH~Q~A~P~TfG~~~a~~~~~l~r~~~rL~~~~~~~~~~~lGGA-vGt~~~~-~~~~~~~~~~~a~~L 219 (351)
T PRK05975 142 EATFGQNALMGHTRMQAAIPITVADRLASWRAPLLRHRDRLEALRADVFPLQFGGA-AGTLEKL-GGKAAAVRARLAKRL 219 (351)
T ss_pred HHHhCCCeeecccCCCcCeehhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccH-hccCccC-CCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999995 7997664 455678999999999
Q ss_pred CCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCCCCCCCCCCCCCCChhHHHHHH
Q psy13008 259 GLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPENEPGSSIMPGKVNPTQVEALT 338 (638)
Q Consensus 259 Gl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~~~~GSSiMPqKrNP~~lE~ir 338 (638)
||+.++ +|+++||+++++++++++++++|+|||+||++|+| +| ||+.+|. ++|||+|||||||+.+|.++
T Consensus 220 Gl~~~~-----~~~~~rD~~~e~~~~la~la~~l~kiA~Di~ll~s---~e-gev~~~~-~~GSS~MPhKrNPv~~E~i~ 289 (351)
T PRK05975 220 GLEDAP-----QWHSQRDFIADFAHLLSLVTGSLGKFGQDIALMAQ---AG-DEISLSG-GGGSSAMPHKQNPVAAETLV 289 (351)
T ss_pred CcCCCc-----chhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CC-CcccCCC-CCccCCCCCCcCcHHHHHHH
Confidence 997532 37899999999999999999999999999999996 69 9999997 59999999999999999999
Q ss_pred HHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhcccc
Q psy13008 339 MVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILP 397 (638)
Q Consensus 339 ~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~V 397 (638)
++++.+.+...++.. ....++|++...+..+|..+|+++.++++++..+..++++|++
T Consensus 290 ~~ar~~~~~~~~~~~-~~~~~~er~~~~~~~e~~~lp~~~~~~~~~l~~~~~ll~~l~~ 347 (351)
T PRK05975 290 TLARFNATQVSGLHQ-ALVHEQERSGAAWTLEWMILPQMVAATGAALRLALELAGNIRR 347 (351)
T ss_pred HHHHHHHHHHHHHHh-cccchhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHh
Confidence 999999998766654 3456778776555568999999999999999999999999875
No 42
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL). This subgroup contains EcASL, the product of the purB gene in Escherichia coli, and related proteins. It is a member of the Lyase class I family of the Lyase_I superfamily. Members of the Lyase class I family function as homotetramers to catalyze similar beta-elimination reactions in which a Calpha-N or Calpha-O bond is cleaved with the subsequent release of fumarate as one of the products. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. ASL catalyzes two non-sequential steps in the de novo purine biosynthesis pathway: the conversion of 5-aminoimidazole-(N-succinylocarboxamide) ribotide (SAICAR) into 5-aminoimidazole-4-carboxamide ribotide (AICAR) and; the conversion of adenylsuccinate (SAMP) into adenosine monophosphate (AMP).
Probab=100.00 E-value=3.5e-63 Score=541.00 Aligned_cols=393 Identities=17% Similarity=0.177 Sum_probs=302.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHCC-CCH------HHHHHHHHHHHHHHcCccccCCccccccccCCcccccchhhHHHHH
Q psy13008 44 MPEAIISAMGILKKAAAQVNKGFG-LDS------KIADTISKAADEVISGKLYEDHFPLSIWQTGSGTQTNMNVNEVISN 116 (638)
Q Consensus 44 ~~~~~i~a~l~ve~A~A~al~e~G-I~~------e~a~~I~~al~~i~~~~~~~~~f~~~~~~~~~~edi~~~vnevie~ 116 (638)
++++++++|++||.|++++|+++| ||+ ++++.|.+++......++ + .+.......+.|+ .+ ++.
T Consensus 6 s~~~~~~~~l~vE~ala~a~a~~g~Ip~~~~~~~~aa~~i~~~~~~~~~~d~-~---~~~~~~~~~~hdv-~a----l~~ 76 (425)
T cd01598 6 SEYALIKYRVQVEVEWLIALSNLEEIPEVPPLTKEELKFLRAIIENFSEEDA-L---RIKEIEATTNHDV-KA----VEY 76 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHhhcCccCH-H---HHHHHHHHHCCCc-HH----HHH
Confidence 799999999999999999999999 999 999999988754210010 0 0000011133332 22 677
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC
Q psy13008 117 RAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDA 196 (638)
Q Consensus 117 ~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~A 196 (638)
.+.+.+|. .|+ +. ..+.|||+|+|||||+||+++|++|+.+.+.+.+.|..++++|.++|++|+||+|+||||+|||
T Consensus 77 ~l~~~~g~-~~~-~~-~~~~~vH~G~TsnDi~dTa~~L~lr~~l~~~l~~~L~~l~~~L~~lA~~~~dt~m~GrTH~Q~A 153 (425)
T cd01598 77 FLKEKFET-LGL-LK-KIKEFIHFACTSEDINNLAYALMIKEARNEVILPLLKEIIDSLKKLAKEYADVPMLSRTHGQPA 153 (425)
T ss_pred HHHHHhcc-ccc-ch-hhhhHhccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccC
Confidence 78888873 221 00 1135788899999999999999999987566789999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCCC----chh-hHHHHHHHHHHcCCCCCCCCCchhh
Q psy13008 197 TPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNTY----VGF-AENCTQRISELTGLPFKSAPNKFEA 271 (638)
Q Consensus 197 qPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~d----~~~-~~~v~~~lA~~LGl~~~~~~ns~da 271 (638)
||||||||+++|+++|.||++||.++ ...++||| ++|| ++.. +++ +..+.+.+++.|||..++.+| +
T Consensus 154 ~P~TfG~~~a~w~~~L~r~~~RL~~~---~~~g~~gG-avGt-~~~~~~~~~~~~~~~~~~~~a~~LgL~~~~~~~---~ 225 (425)
T cd01598 154 TPTTLGKELAVFVYRLERQYKQLKQI---EILGKFNG-AVGN-FNAHLVAYPDVDWRKFSEFFVTSLGLTWNPYTT---Q 225 (425)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHHH---HHhheeeC-chhh-hhhhhhccCcccHHHHHHHHHHHhCcCCCCccc---c
Confidence 99999999999999999999999999 35566877 5798 3332 222 367889999999998754443 3
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcC--CCCCCCCCCCCCCChhHHHHHHHHHHHHhccHH
Q psy13008 272 LASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLP--ENEPGSSIMPGKVNPTQVEALTMVAAQVMGNHV 349 (638)
Q Consensus 272 ~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp--~~~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~ 349 (638)
+++||+++|+++++++++++|+|||+||++|++ + ||+.++ .+++|||+|||||||+.+|+++++++.+.+...
T Consensus 226 v~~rD~~~e~~~~La~la~~L~kia~Di~ll~s---~--ge~~e~~~~~~~GSS~MPhKrNPv~~E~i~~~a~~a~~~~~ 300 (425)
T cd01598 226 IEPHDYIAELFDALARINTILIDLCRDIWGYIS---L--GYFKQKVKKGEVGSSTMPHKVNPIDFENAEGNLGLSNALLN 300 (425)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---C--cceeecCCCCCCCcCCCCCCcCchHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999997 3 444443 468999999999999999999999988888765
Q ss_pred HHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhhHHH-----hcCCCCCHHH
Q psy13008 350 AVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLMLVT-----ALNPHIGYDK 424 (638)
Q Consensus 350 ~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~lat-----~La~~ig~~~ 424 (638)
.++......+++++...+...|.+ +.+..+...++..+..++++|+||++||++|+..++++++ .|++ +|+++
T Consensus 301 ~~~~~~~~~~~eRD~~~~~~e~~~-~~~~~~~~~al~~~~~ll~~L~v~~~rm~~nl~~~~~i~sE~~~~~l~~-~gr~~ 378 (425)
T cd01598 301 HLSAKLPISRLQRDLTDSTVLRNI-GVAFGHSLIAYKSLLRGLDKLELNEARLLEDLDANWEVLAEPIQTVMRR-YGIPN 378 (425)
T ss_pred HHHhhhhhhhhcccccchhhhccH-HHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCHHHHHHHHHHHh-cChHh
Confidence 554333245677776655556767 7777888888889999999999999999999988877654 3455 99999
Q ss_pred HHHHHHHHHH-cCCCHHH---HHHHcCCCCHH---HHhhhcCcccccC
Q psy13008 425 AAEIAKHAYK-TGITLKE---AAVKLGYLTEQ---EYDQWVKPEKMLG 465 (638)
Q Consensus 425 Ah~iv~~A~~-~g~~l~e---al~~~~~Ls~e---el~~llDP~~~vg 465 (638)
||++|.++.. +..+..+ ...+.. .+++ +|. .|.|.+|+|
T Consensus 379 Ah~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 424 (425)
T cd01598 379 PYEKLKDLTRGKRIDKETLKEFIDSLD-IPEEAKAELL-ALTPANYIG 424 (425)
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHhCC-CCHHHHHHHH-hCCccccCC
Confidence 9999988743 2333333 222222 3333 333 358999998
No 43
>PLN02848 adenylosuccinate lyase
Probab=100.00 E-value=8.1e-63 Score=542.58 Aligned_cols=414 Identities=16% Similarity=0.181 Sum_probs=322.1
Q ss_pred ccCCCCCCch--HhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-C---CH---HHHHHHHHHHHHHHcCc
Q psy13008 17 EVPNDKYYGA--QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-L---DS---KIADTISKAADEVISGK 87 (638)
Q Consensus 17 ~~P~~~~yg~--~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I---~~---e~a~~I~~al~~i~~~~ 87 (638)
..|++.+|+. ++|+++| ++++++++|++||.|+++++++.| | |+ ++++.|.+++.++....
T Consensus 12 ~~pl~~ry~~~~~e~~~if----------Sd~a~~~~~l~vE~ala~a~a~~g~i~~~P~i~~~aa~~i~~~~~~~~~~d 81 (458)
T PLN02848 12 LSPLDGRYWSKVKDLRPIF----------SEFGLIRYRVLVEVKWLLKLSQIPEVTEVPPFSDEANSFLEGIIAGFSVDD 81 (458)
T ss_pred CCCchhhhcCCcHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCHhh
Confidence 5799999999 8999999 899999999999999999999999 8 88 99999988873321000
Q ss_pred cccCCccccccccCCcccccchhhHHHHHHHHHHhcc--CCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy13008 88 LYEDHFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGG--KLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLL 165 (638)
Q Consensus 88 ~~~~~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~--~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~ 165 (638)
. . .+.......++| +-. ++..+.+.+|. +.|. .+.|||+|+|||||+||+++|++|+.+...|.
T Consensus 82 ~-~---~~~~~e~~t~hd----v~a-~~~~l~~~~~~~~~~~~-----~~~~vH~G~TsqDi~dTa~~L~lr~a~~~~l~ 147 (458)
T PLN02848 82 A-L---EVKKIERVTNHD----VKA-VEYFLKQKCKSHPELAK-----VLEFFHFACTSEDINNLSHALMLKEGVNSVVL 147 (458)
T ss_pred H-H---HHHHHHHHhCCC----cHH-HHHHHHHHhccccchhh-----hhCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000000112333 222 56677788862 1110 13578889999999999999999998643399
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCC---
Q psy13008 166 CSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT--- 242 (638)
Q Consensus 166 ~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~--- 242 (638)
+.|..++++|.++|++|+|++|+||||+|||+|||||||+++|+++|.|+++||.++. ..+++||+ +||....
T Consensus 148 ~~L~~l~~aL~~lA~~~~dt~m~GRTH~Q~A~PiTfG~~~a~w~~~L~r~~~rL~~~~---l~g~~~GA-vGt~aa~~~~ 223 (458)
T PLN02848 148 PTMDEIIKAISSLAHEFAYVPMLSRTHGQPASPTTLGKEMANFAYRLSRQRKQLSEVK---IKGKFAGA-VGNYNAHMSA 223 (458)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeeccccCccceeehHHHHHHHHHHHHHHHHHHHHHHH---hccEeecc-cchhhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999882 34777774 6874332
Q ss_pred Cchh-hHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CC
Q psy13008 243 YVGF-AENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NE 319 (638)
Q Consensus 243 d~~~-~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~ 319 (638)
.+++ +..+.+.+++.|||...+.. +++++||+++|+++++++++++|+|||+|++.|+ |+||+.++. ++
T Consensus 224 ~~~~d~~~v~~~la~~LGL~~~~~~---~~v~~rD~~~e~~~~La~~a~~l~kia~Di~~~~-----e~ge~~e~~~~~~ 295 (458)
T PLN02848 224 YPEVDWPAVAEEFVTSLGLTFNPYV---TQIEPHDYMAELFNAVSRFNNILIDFDRDIWSYI-----SLGYFKQITKAGE 295 (458)
T ss_pred cCCCCHHHHHHHHHHHhCCCCCCch---hhHhccHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hcCCcccccCCCC
Confidence 1333 36788999999999852222 2579999999999999999999999999988777 577776553 58
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccCh
Q psy13008 320 PGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNE 399 (638)
Q Consensus 320 ~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~ 399 (638)
+|||||||||||+.+|+++++++.+.|.+..++.+...+++|++...+...|.+ +.+..++..++..+..++++|+||+
T Consensus 296 ~GSS~MP~KrNPv~~E~i~~~a~~~~~~~~~~~~~~~~~~~eRD~~~s~~e~~~-~~~~~~~~~al~~~~~~l~~L~v~~ 374 (458)
T PLN02848 296 VGSSTMPHKVNPIDFENSEGNLGLANAELSHLSMKLPISRMQRDLTDSTVLRNM-GVGLGHSLLAYKSTLRGIGKLQVNE 374 (458)
T ss_pred CCcCCCCCCcCcHHHHHHHHHHHHHHHHHHHHHhcCcchhhccccchhhhhccH-HHHHHHHHHHHHHHHHHHccCEECH
Confidence 999999999999999999999999999998887553556678776555446666 7777877788888899999999999
Q ss_pred HHHHHhhhhhhhHHH-----hcCCCCCHHHHHHHHHHHH-HcCCC---HHHHHHHcCCCCHHHHhhh--cCcccccCCCC
Q psy13008 400 DTIAKHVNDSLMLVT-----ALNPHIGYDKAAEIAKHAY-KTGIT---LKEAAVKLGYLTEQEYDQW--VKPEKMLGPEY 468 (638)
Q Consensus 400 erm~~~l~~~~~lat-----~La~~ig~~~Ah~iv~~A~-~~g~~---l~eal~~~~~Ls~eel~~l--lDP~~~vg~a~ 468 (638)
+||++|++.++++.+ .|++ +|+++||++++++. .+.++ +++...... ++++..+++ |.|.+|+|.+.
T Consensus 375 ~rm~~nl~~~~~~~sE~~~~~l~~-~G~~~A~e~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~y~g~~~ 452 (458)
T PLN02848 375 ARLAEDLDQTWEVLAEPIQTVMRR-YGVPEPYEKLKELTRGRAVTKESMREFIEGLE-LPEEAKDQLLKLTPHTYIGAAA 452 (458)
T ss_pred HHHHHHHHccchhHHHHHHHHHHH-hChHHHHHHHHHHHHHccCCHHHHHHHHHHcC-CCHHHHHHHHhCCchhhhchHH
Confidence 999999998887643 4566 89999999998764 33342 223222222 554444444 47999999765
Q ss_pred C
Q psy13008 469 H 469 (638)
Q Consensus 469 ~ 469 (638)
.
T Consensus 453 ~ 453 (458)
T PLN02848 453 A 453 (458)
T ss_pred H
Confidence 4
No 44
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F ....
Probab=100.00 E-value=6.4e-62 Score=514.30 Aligned_cols=307 Identities=33% Similarity=0.476 Sum_probs=251.1
Q ss_pred CccccCCCCCCchHhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHc-CccccC
Q psy13008 14 GELEVPNDKYYGAQTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVIS-GKLYED 91 (638)
Q Consensus 14 g~~~~P~~~~yg~~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~~-~~~~~~ 91 (638)
|.|++|.+.+|+..+.++.++ .......++++.|+++|+++.| ||++++++|.++|+++.. ++. ++
T Consensus 1 Gr~~~~~~~~~~~~s~~~~~~-----------~~l~~~~~~~e~a~~~a~a~~g~i~~~~a~~I~~a~~~i~~~~~~-~~ 68 (312)
T PF00206_consen 1 GRYEVPTDEMYAIFSDRARFD-----------FWLAEYDIRVEAALAKALAEAGIIPKEAADAIVKALEEILEDGDL-DD 68 (312)
T ss_dssp EEEEEETTHHHHHHHHHHHHH-----------HHHHSHHHHHHHHHHHHHHHTTSSTHHHHHHHHHHHHHHHHHTCT-HG
T ss_pred CCcCCchHHHHHHHCHHHHhC-----------CEeeccHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhcc-cc
Confidence 678888887777665555542 1111233339999999999999 999999999999999866 444 33
Q ss_pred CccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 92 HFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQML 171 (638)
Q Consensus 92 ~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L 171 (638)
.|+++... +++|.. ++..+.+.+|+..+. +.+++.|||+|+||||++||+++|++|+.+.+.|.+.|.++
T Consensus 69 ~~~~~~~~----~~~~~~----~~~~l~~~~~e~~~~--~~~~~~~vH~G~Ts~Di~~Ta~~l~lr~~~~~~l~~~l~~l 138 (312)
T PF00206_consen 69 AFELDEIE----EDIGHA----VEANLNEVLGELLGE--PPEAGGWVHYGRTSNDIVDTALRLQLRDALLELLLERLKAL 138 (312)
T ss_dssp HHHHCSCS----SSHHHH----HHHHHHHHHHHHHTH--SSGGGGGTTTT--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhh----ccchhH----HHHHHHHHhhhhhhc--cccccccccCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 55555433 344444 333333444311111 24778899999999999999999999998756799999999
Q ss_pred HHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccc-cCCCCCCchhhHHH
Q psy13008 172 HDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAV-GTGLNTYVGFAENC 250 (638)
Q Consensus 172 ~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAv-GT~~~~d~~~~~~v 250 (638)
+++|.++|++|++|+||||||+|||||||||||+++|+++|.||++||.+++++++.+|||||+. ||+++.++++...+
T Consensus 139 ~~~L~~~a~~~~~t~~~grTh~Q~A~P~T~G~~~a~~~~~l~r~~~rL~~~~~~~~~~~lgga~g~gt~~~~~~~~~~~~ 218 (312)
T PF00206_consen 139 IDALAELAEEHKDTPMPGRTHGQPAQPTTFGHKLAAWADELARDLERLEEARKRLNVSPLGGAVGAGTSLGIDREFQERV 218 (312)
T ss_dssp HHHHHHHHHHTTTSEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEETTTTTTTSSHTTSHHHHHHHH
T ss_pred HHHHHHHHHhhcCceeccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHhHHHHHhccCCCccccccccCcchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999763 78778777766666
Q ss_pred HHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCC
Q psy13008 251 TQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGK 328 (638)
Q Consensus 251 ~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqK 328 (638)
.+.|++.+||+ .+..|+.+|+++||+++++++++++++++|+|||+||++|+| +|+||+++|. +++|||+||||
T Consensus 219 ~~~L~~~~~l~-~~~~~~~~~~~~rd~~~e~~~~l~~l~~~l~kia~Dl~~~~s---~e~g~~~~~~~~~~~GSS~MP~K 294 (312)
T PF00206_consen 219 AEELGEFTGLG-VPAPNWHDAVSSRDRLAELASALALLAGTLSKIAEDLRLLSS---TEIGEVEEPFPEGQVGSSIMPHK 294 (312)
T ss_dssp HHHHHHHHCST-EECSSHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---TTTSSEEEEGGGSSSCSSSSTTC
T ss_pred Hhhhhhhhhcc-cchhhcccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC---CceeeeecccccccCCCccCCCC
Confidence 66666666666 367889999999999999999999999999999999999997 5799999885 46799999999
Q ss_pred CChhHHHHHHHHHHHHhc
Q psy13008 329 VNPTQVEALTMVAAQVMG 346 (638)
Q Consensus 329 rNP~~lE~ir~~a~~v~G 346 (638)
|||+.+|+++++|++++|
T Consensus 295 ~NP~~~E~i~~~a~~v~G 312 (312)
T PF00206_consen 295 RNPVILENIRGLARQVIG 312 (312)
T ss_dssp EETHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCcC
Confidence 999999999999999987
No 45
>KOG2700|consensus
Probab=100.00 E-value=8.2e-48 Score=406.33 Aligned_cols=441 Identities=18% Similarity=0.172 Sum_probs=356.7
Q ss_pred cccCCCCCCch-HhhHHhhcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHcCccccC
Q psy13008 16 LEVPNDKYYGA-QTVRSLINFPIGGESERMPEAIISAMGILKKAAAQVNKGFG---LDSKIADTISKAADEVISGKLYED 91 (638)
Q Consensus 16 ~~~P~~~~yg~-~~~rai~~f~~~~~~~~~~~~~i~a~l~ve~A~A~al~e~G---I~~e~a~~I~~al~~i~~~~~~~~ 91 (638)
|++|...+|.+ .+|-.++ ++.+.++.|.++|.-+|.+-.++| ||++++++++..++- ..-+
T Consensus 6 ~~~pls~ry~~~~~l~~~~----------s~~~~~~twr~lw~~lA~ae~~lgL~~itk~ai~e~~s~~~~-e~~d---- 70 (481)
T KOG2700|consen 6 YKSPLSGRYASISELNPIF----------SDRNKFSTWRRLWLWLAEAEKELGLTTITKEAIEEMKSSRDI-ENID---- 70 (481)
T ss_pred CCCcccceeccccccchhh----------hhhhhhhhhhHHHHhhhhhhhcCCcccchHHHHHHHHhhccc-cccc----
Confidence 89999999997 7888887 668899999999888888888777 799999999887652 1111
Q ss_pred CccccccccCCcccccchhhHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy13008 92 HFPLSIWQTGSGTQTNMNVNEVISNRAIEMLGGKLGSKDPVHPNDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQML 171 (638)
Q Consensus 92 ~f~~~~~~~~~~edi~~~vnevie~~l~e~lG~~~g~~l~vH~~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L 171 (638)
|+.....++ .-.|+|+.+. ..+|. .+. +..| .+|+|+|++++.|.+....+|+.. +.+.+.|..+
T Consensus 71 -~~~l~~ee~------r~~hdVmahv--h~~~~-~cp---~aag-iihlgatsc~vtdnadli~~rd~~-k~i~~~l~~v 135 (481)
T KOG2700|consen 71 -FTALSPEEG------RYRHDVMAHV--HSFGE-LCP---IAAG-IIHLGATSCFVTDNADLIELRDAS-KLILPYLAGV 135 (481)
T ss_pred -hhhcChhhh------hhcccHHHHH--HHHHh-hcc---hhcc-eEEeeeeeeeecCCccceechhHH-HHHHHHHHHH
Confidence 222111111 1135555542 33442 221 2333 678899999999999999999986 5699999999
Q ss_pred HHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCccccccCCCCC------Cch
Q psy13008 172 HDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKYGIERVKDTLPRLYQLAIGGTAVGTGLNT------YVG 245 (638)
Q Consensus 172 ~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~Rd~eRL~~~~~rl~~~pLGGaAvGT~~~~------d~~ 245 (638)
|+.|..++.+|++++|.||||+|+|+|+|||++.+-|..+|.+|+++|.+++.++....++|+ +||..+. +.+
T Consensus 136 Idrls~~~~~~k~~~~~g~Th~q~A~l~tfgkr~~~~~qel~~~l~~f~~~~~~~~~~~~kga-~gtqasf~~l~~~~~~ 214 (481)
T KOG2700|consen 136 IDRLSQFADKYKEKPTLGRTHLQPAQLTTFGKRMCLWIQELLRDLERFHRARTDVRFRGLKGA-TGTQASFLSLFLGDMD 214 (481)
T ss_pred HHHHHHHHHHhccceecccccCccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccc-hhhHHHHHHhhcccHH
Confidence 999999999999999999999999999999999999999999999999999999999999995 7996542 344
Q ss_pred hhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCC
Q psy13008 246 FAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSS 323 (638)
Q Consensus 246 ~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSS 323 (638)
..+++.+.+++++||......+ -++++||..++.++.+++++++..|+|.|+++++ .|+|+.+|. ++.|||
T Consensus 215 kv~~ld~Lv~k~~gf~~~~~~T--GQt~sr~~~~~~~~~la~lgat~~k~~Tdirll~-----~~~ev~epFea~q~gsS 287 (481)
T KOG2700|consen 215 KVEKLDSLVTKELGFVPMYIVT--GQTYSRKTDAEEVAPLASLGATAHKYATDIRLLA-----KFAEVEEPFEAHQIGSS 287 (481)
T ss_pred HHHHHHHHHHHHhCCCcccccc--CCcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhhccccccccccc
Confidence 5567778899999998754433 3689999999999999999999999999999999 399999994 599999
Q ss_pred CCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCccccccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHH
Q psy13008 324 IMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFELNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIA 403 (638)
Q Consensus 324 iMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~ 403 (638)
+||+||||+.+|.++++++.+.+..+.++..++..|+++....+.+.|.++|..++.+++.+....++++||.|.|++|+
T Consensus 288 aMp~krNpm~~E~itslar~l~~~v~~al~~~~~qw~Ertl~dSa~~rivlP~~Fl~ad~~L~~~~ni~~gl~v~p~~i~ 367 (481)
T KOG2700|consen 288 AMPYKRNPMRCERITSLARHLRPYVTQALNTASVQWHERTLDDSANRRIVLPDAFLTADGNLGTLLNILEGLVVYPKVIE 367 (481)
T ss_pred cCCCCCCCchhHHHhHHHHHHHHHHHHHhhhHHHHHhhcccccccccceechHHHHHHHHHHHHHHHHHhhcccccHHHH
Confidence 99999999999999999999999888877656666777765555557889999999999999878899999999999999
Q ss_pred HhhhhhhhH------HHhcCCC-CCHHHHHHHHH----HH----HHcCCCHHHHHH--Hc--CCCCHHHHhhhcCccccc
Q psy13008 404 KHVNDSLML------VTALNPH-IGYDKAAEIAK----HA----YKTGITLKEAAV--KL--GYLTEQEYDQWVKPEKML 464 (638)
Q Consensus 404 ~~l~~~~~l------at~La~~-ig~~~Ah~iv~----~A----~~~g~~l~eal~--~~--~~Ls~eel~~llDP~~~v 464 (638)
+++.....+ .++|.+. ..|++||+.++ ++ .++|..+.+..+ ++ +....||++.+|||.+|+
T Consensus 368 r~i~~e~~~~~~eni~mAL~~~g~srq~ahe~I~~L~~~a~~~v~~e~g~~~~ie~~k~~~~~~~v~ee~~~ll~p~~f~ 447 (481)
T KOG2700|consen 368 RNIRDELPFMVLENIIMALVKAGLSRQEAHEGIRKLSHQAAQVVKQEGGDNDLIERAKEDPTFKPVKEELDSLLDPLNFT 447 (481)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHhcccccccchHHHHHhhccchhcc
Confidence 998865544 2456554 56999999764 23 577887655433 22 467899999999999999
Q ss_pred CCCC---CCccCccchhhccchhhHHHHHhhhcC
Q psy13008 465 GPEY---HPYFKPDNNETIFHTEKVISQQILAAK 495 (638)
Q Consensus 465 g~a~---~~~~~~dv~~~~~~~~~~v~~~~~~~~ 495 (638)
|.+. +.+...+|..++-.|...|. ..+.+|
T Consensus 448 gra~dQie~~v~~~~~~a~a~~~~~~~-~~v~L~ 480 (481)
T KOG2700|consen 448 GRAVDQIEKFVPKEVVPALAAYALAVD-EAVHLG 480 (481)
T ss_pred cccHHHHHHHhhhhhhHHHHHHHHHhh-hhhccC
Confidence 9997 67888899998888888887 333333
No 46
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions. Lyase class I_like superfamily of enzymes that catalyze beta-elimination reactions and are active as homotetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. This superfamily contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase. The lyase class I family comprises proteins similar to class II fumarase, aspartase, adenylosuccinate lyase, argininosuccinate lyase, and 3-carboxy-cis, cis-muconate lactonizing enzyme which, for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. Histidine or phenylalanine ammonia-lyase catalyze a beta-elimination of ammonia from histidine and phenylalanine, respective
Probab=100.00 E-value=2.3e-33 Score=282.74 Aligned_cols=163 Identities=42% Similarity=0.550 Sum_probs=152.2
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCcccchhHHHHHHHHHHHH
Q psy13008 135 NDHVNKCQSSNDTFPTAMHIAVALEIHNRLLCSLQMLHDALDKKSQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQIKY 214 (638)
Q Consensus 135 ~~~Vh~GrSrnDivdTal~L~lr~~l~~~L~~~L~~L~~aL~~lA~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L~R 214 (638)
..++|+|+||||+++|++++++|+.+.+ +...+..+..++..+|++|++++||||||+|+|+|+||||++.+|.+.|.|
T Consensus 34 ~~~~h~g~s~~d~~~t~~~~~~~~~l~~-l~~~l~~~~~~l~~~a~~~~~~~~~~~th~q~A~p~t~g~~~~~~~~~l~~ 112 (231)
T cd01594 34 SALVHKGRSSNDIGTTALRLALRDALDD-LLPLLKALIDALALKAEAHKGTVMPGRTHLQDAQPVTLGYELRAWAQVLGR 112 (231)
T ss_pred CCCCCCCCCCchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCEeecccccccCccccHHHHHHHHHHHHHH
Confidence 3478899999999999999999998764 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhcCCccccccCCCCCCchhhHHHHHHHHHHcCCCCCCCCCchhhhhchhHHHHHHHHHHHHHHHHHH
Q psy13008 215 GIERVKDTLPRLYQLAIGGTAVGTGLNTYVGFAENCTQRISELTGLPFKSAPNKFEALASHDALVEVSGALNTVAVSLMK 294 (638)
Q Consensus 215 d~eRL~~~~~rl~~~pLGGaAvGT~~~~d~~~~~~v~~~lA~~LGl~~~~~~ns~da~~sRD~~~e~~~~la~la~~LsR 294 (638)
+++||.++ +++++++.++.++.+|+|
T Consensus 113 ~~~rL~~~------------------------------------------------------~~~~~~~~l~~~~~~l~r 138 (231)
T cd01594 113 DLERLEEA------------------------------------------------------AVAEALDALALAAAHLSK 138 (231)
T ss_pred HHHHHHHH------------------------------------------------------HHHHHHHHHHHHHHHHHH
Confidence 99999998 889999999999999999
Q ss_pred HHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcc
Q psy13008 295 IANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGG 355 (638)
Q Consensus 295 iA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~ 355 (638)
||+|+++|++. |++++.+|+ .++|||+||||+||+.+|++++++..+.|....+....
T Consensus 139 ~a~d~~~~~~~---~~~~~~~~~~~~~~gSS~mp~k~Np~~~e~~~~~~~~~~~~~~~~~~~~ 198 (231)
T cd01594 139 IAEDLRLLLSG---EFGELGEPFLPGQPGSSIMPQKVNPVAAELVRGLAGLVIGNLVAVLTAL 198 (231)
T ss_pred HHHHHHHHcCC---CCCeeeCccCCCCCCCcCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999984 677888886 48999999999999999999999999999987776543
No 47
>PRK08937 adenylosuccinate lyase; Provisional
Probab=99.96 E-value=4.4e-29 Score=250.68 Aligned_cols=178 Identities=26% Similarity=0.290 Sum_probs=151.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcceeEEcCC--CCCCCCCCCCCCChhHHHHHHHHHHHHhccHHHHHhcccCcccc
Q psy13008 284 ALNTVAVSLMKIANDIRFLGSGPRSGLGELKLPE--NEPGSSIMPGKVNPTQVEALTMVAAQVMGNHVAVTVGGSNGHFE 361 (638)
Q Consensus 284 ~la~la~~LsRiA~DL~llsS~pr~E~gev~lp~--~~~GSSiMPqKrNP~~lE~ir~~a~~v~G~~~~~~~~~~~~~~e 361 (638)
+++.++++|+|||+||++|+| +|||||.+|. +++|||||||||||+.+|.++++++++.|+..+++... +++++
T Consensus 22 ~l~~i~~~l~ria~Dl~~~~s---~e~gei~~~~~~~~~gSSiMP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~-~~~~e 97 (216)
T PRK08937 22 VLALIATSLEKFANEIRLLQR---SEIREVEEPFAKGQKGSSAMPHKRNPIGSERITGLARVLRSYLVTALENV-PLWHE 97 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---cccceeecccccCCCCCccCCCccCcHHHHHHHHHHHHHHHHHHHHHHHh-HHHhc
Confidence 899999999999999999997 6999999994 58999999999999999999999999999998887655 67788
Q ss_pred ccccchhHHhhHHHHHHHHHHHHHHHHHHhhhccccChHHHHHhhhhhhh--HHHh----cC-CCCCHHHHHHHHH----
Q psy13008 362 LNVFKPLIVSNVLRSIRLLADTTESFTTKCVTGILPNEDTIAKHVNDSLM--LVTA----LN-PHIGYDKAAEIAK---- 430 (638)
Q Consensus 362 ~~~~~~~i~~~ll~s~~~l~~~~l~~~~~vl~~L~Vn~erm~~~l~~~~~--lat~----La-~~ig~~~Ah~iv~---- 430 (638)
+|...+...|..++++......++..+..++++++||++||++++..++. +++. |+ .++||++||++++
T Consensus 98 rd~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~v~~~rm~~~~~~~~~~~~a~~l~~~L~~~g~~~~~Ah~~v~~~~~ 177 (216)
T PRK08937 98 RDLSHSSAERIALPDAFLALDYILNRFVNILENLVVFPENIERNLDKTLGFIATERVLLELVEKGMGREEAHELIREKAM 177 (216)
T ss_pred cCCchhHHHhhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHHHhcChHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 88766655666666666666777778889999999999999999997443 3333 33 4799999999875
Q ss_pred HHHHcCCCHHHHHHHcC----CCCHHHHhhhcCcccccC
Q psy13008 431 HAYKTGITLKEAAVKLG----YLTEQEYDQWVKPEKMLG 465 (638)
Q Consensus 431 ~A~~~g~~l~eal~~~~----~Ls~eel~~llDP~~~vg 465 (638)
.+.++|+++.+.+...+ .+++++++.+|||.+|+|
T Consensus 178 ~~~~~g~~~~~~~~~~~~~~~~l~~~~l~~~ldp~~~vg 216 (216)
T PRK08937 178 EAWKNQKDLRELLEADERFTKQLTKEELDELFDPEAFVG 216 (216)
T ss_pred HHHHhCCCHHHHHHhChHhHhcCCHHHHHHHhCHHhhcC
Confidence 46788999999888753 689999999999999997
No 48
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=98.63 E-value=1.8e-08 Score=80.23 Aligned_cols=55 Identities=53% Similarity=0.823 Sum_probs=48.5
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCC
Q psy13008 412 LVTALNPHIGYDKAAEIAKHAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGP 466 (638)
Q Consensus 412 lat~La~~ig~~~Ah~iv~~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~ 466 (638)
++|.|++.+||+.|.+++++|.++|++++|++.+.+.||+++++++|||.+++++
T Consensus 1 laTaL~p~iGYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p~~mt~P 55 (55)
T PF10415_consen 1 LATALNPYIGYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDPERMTNP 55 (55)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSHHHHTT-
T ss_pred CeeeccchhccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCHHHcCCc
Confidence 4689999999999999999999999999999999999999999999999998764
No 49
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B ....
Probab=97.92 E-value=8e-06 Score=68.37 Aligned_cols=60 Identities=28% Similarity=0.343 Sum_probs=44.3
Q ss_pred hHHHhcCC-----CCCHHHHHHHHH----HHHHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhcc
Q psy13008 411 MLVTALNP-----HIGYDKAAEIAK----HAYKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIF 481 (638)
Q Consensus 411 ~lat~La~-----~ig~~~Ah~iv~----~A~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~ 481 (638)
++||+||+ ++|||+||++++ .|.++|+++.+ ++.++++++ ++.+++|+.+ ++
T Consensus 2 ~~ATdlAD~LVr~GipFR~AH~iVg~~V~~a~~~~~~l~~-------l~~~~~~~~-----------~~~~~~~~~~-~l 62 (70)
T PF14698_consen 2 STATDLADYLVRKGIPFREAHHIVGRLVRLAEEEGKPLSE-------LTLEELQEI-----------SPEFEEDVRE-AL 62 (70)
T ss_dssp GGHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHTTS-GGG-------S-HHHHHHH------------TT--GGGGG-GS
T ss_pred ccHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCChhh-------CCHHHHHHH-----------hHHhHHHHHH-HC
Confidence 56777754 799999999876 45678999887 999999996 5667899999 99
Q ss_pred chhhHHHH
Q psy13008 482 HTEKVISQ 489 (638)
Q Consensus 482 ~~~~~v~~ 489 (638)
+++++|++
T Consensus 63 ~~~~~V~~ 70 (70)
T PF14698_consen 63 DPEASVEA 70 (70)
T ss_dssp SHHHHHTT
T ss_pred CHHHHhcC
Confidence 99999864
No 50
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) []. This entry represents the C-terminal, seven alpha-helical, domain of adenylosuccinate lyase [].; PDB: 1YIS_A 1C3U_B 1C3C_A 3C8T_A 2PFM_B 1RE5_D 1Q5N_A 2VD6_D 2J91_B 2X75_A.
Probab=97.89 E-value=4.4e-06 Score=71.69 Aligned_cols=57 Identities=30% Similarity=0.506 Sum_probs=44.7
Q ss_pred HhcCCC-CCHHHHHHHHH----HHHHcCCCHHHHHHHc----CCCCHHHHhhhcCcccccCCCCCC
Q psy13008 414 TALNPH-IGYDKAAEIAK----HAYKTGITLKEAAVKL----GYLTEQEYDQWVKPEKMLGPEYHP 470 (638)
Q Consensus 414 t~La~~-ig~~~Ah~iv~----~A~~~g~~l~eal~~~----~~Ls~eel~~llDP~~~vg~a~~~ 470 (638)
..|++. +|+++||+++. +|.++|.+|.|++.++ +.|+.++|+++|||..|+|.+..+
T Consensus 11 ~~L~~~G~gR~~Ah~lv~~~a~~a~~~~~~l~e~l~~d~~i~~~ls~~el~~l~dp~~ylg~~~~i 76 (81)
T PF10397_consen 11 LALAEKGLGRQEAHELVQEAAMEAWENGRDLREVLLADPEIAAYLSEEELEELFDPESYLGNADEI 76 (81)
T ss_dssp HHHHHTTH-HHHHHHHHHHHHHHHHHTTS-HHHHHCTTHHHHTTSHHHHHHHHT-GGGGCTTHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHhHCCHHHHHhhcCHHHHHhhHHHH
Confidence 455555 99999999864 5788999999999853 679999999999999999987653
No 51
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli). It has been identified in bacteria, eukaryotes and archaea and is found together with the lyase domain IPR000362 from INTERPRO. ASL catalyses the cleavage of succinylaminoimidazole carboxamide ribotide to aminoimidazole carboxamide ribotide and fumarate and the cleavage of adenylosuccinate to adenylate and fumarate []. ; GO: 0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity, 0006188 IMP biosynthetic process; PDB: 2HVG_A 2QGA_C 2PTS_A 2PTR_A 2PTQ_B 3BHG_A 3GZH_A.
Probab=90.96 E-value=0.65 Score=42.55 Aligned_cols=73 Identities=16% Similarity=0.263 Sum_probs=41.1
Q ss_pred HhhhccccChHHHHHhhhhhhhHHHh----cCCCCCHHHHHHHHHHHHHcCCCHH-----HHHHHcCCCCHHHHhhh--c
Q psy13008 390 KCVTGILPNEDTIAKHVNDSLMLVTA----LNPHIGYDKAAEIAKHAYKTGITLK-----EAAVKLGYLTEQEYDQW--V 458 (638)
Q Consensus 390 ~vl~~L~Vn~erm~~~l~~~~~lat~----La~~ig~~~Ah~iv~~A~~~g~~l~-----eal~~~~~Ls~eel~~l--l 458 (638)
+-++.|.||+++|.+.|+++|.+..+ +-...|++.+||..++.. .|+.+. +.+.... +++++-+++ +
T Consensus 32 kGl~Kl~vn~~~l~~dL~~nWeVlaEpIQTvmRr~g~~~pYE~LK~lT-Rg~~it~~~l~~fI~~L~-ip~~~k~~L~~l 109 (115)
T PF08328_consen 32 KGLGKLEVNEERLAEDLDENWEVLAEPIQTVMRRYGIPNPYEKLKELT-RGKKITKEDLREFIESLD-IPEEAKARLLAL 109 (115)
T ss_dssp HHHHTEEE-HHHHHHHHCT-GGGGHHHHHHHHHHTT-SSHHHHHHHHH-TTS---HHHHHHHHHTSS-S-HHHHHHHHH-
T ss_pred HHHhcccCCHHHHHHHHHHCHHHHHHHHHHHHHHcCCCCHHHHHHHHH-cCCCCCHHHHHHHHHhCC-CCHHHHHHHHhc
Confidence 56888999999999999999976321 123568888888887653 555432 2222233 666664443 3
Q ss_pred Cccccc
Q psy13008 459 KPEKML 464 (638)
Q Consensus 459 DP~~~v 464 (638)
.|.+|+
T Consensus 110 tP~~Y~ 115 (115)
T PF08328_consen 110 TPATYI 115 (115)
T ss_dssp -CCC--
T ss_pred CccccC
Confidence 677664
No 52
>KOG2700|consensus
Probab=89.20 E-value=5.2 Score=44.64 Aligned_cols=33 Identities=15% Similarity=-0.036 Sum_probs=26.8
Q ss_pred HHHhcccccccccccccCcccchhHHHHHHHHHH
Q psy13008 179 SQEFQNIIKIGRTHTQDATPLTLGQEFSGYVTQI 212 (638)
Q Consensus 179 A~~~~dt~m~GrTHlQ~AqPiT~G~~la~~a~~L 212 (638)
+++..=.+|.-+| ||.+-|.+.|..++..+.-.
T Consensus 224 ~k~~gf~~~~~~T-GQt~sr~~~~~~~~~la~lg 256 (481)
T KOG2700|consen 224 TKELGFVPMYIVT-GQTYSRKTDAEEVAPLASLG 256 (481)
T ss_pred HHHhCCCcccccc-CCcCCchhHHHHHHHHHHHH
Confidence 3677778999999 99999999999887665443
No 53
>PF10925 DUF2680: Protein of unknown function (DUF2680); InterPro: IPR024485 Members in this family of proteins are annotated as YckD however currently no function is known.
Probab=62.01 E-value=27 Score=28.45 Aligned_cols=39 Identities=28% Similarity=0.251 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH
Q psy13008 46 EAIISAMGILKKAAAQVNKGFG-LDSKIADTISKAADEVI 84 (638)
Q Consensus 46 ~~~i~a~l~ve~A~A~al~e~G-I~~e~a~~I~~al~~i~ 84 (638)
.++...++...++..--..+.| ||++.|+.|.+.++...
T Consensus 10 ~~l~~qm~e~kK~~idk~Ve~G~iTqeqAd~ik~~id~~~ 49 (59)
T PF10925_consen 10 KALYKQMLELKKQIIDKYVEAGVITQEQADAIKKHIDQRQ 49 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4788889999999999999999 99999999999988643
No 54
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=54.74 E-value=12 Score=32.82 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhH
Q psy13008 588 LFLVIIGFFLVVIFRRLKLWKKKTSA 613 (638)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (638)
-|+||+|.|++++.--+--|||+..+
T Consensus 36 ~~lvI~~iFil~VilwfvCC~kRkrs 61 (94)
T PF05393_consen 36 WFLVICGIFILLVILWFVCCKKRKRS 61 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 49999999999998888899887543
No 55
>PRK13454 F0F1 ATP synthase subunit B'; Provisional
Probab=52.94 E-value=20 Score=35.45 Aligned_cols=62 Identities=10% Similarity=0.196 Sum_probs=39.1
Q ss_pred cccCCCCCcccccCCCCCCCccccccccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Q psy13008 553 TSEFPSEAPLANLSHGNSSYPVHSQNSLSSMKNSCLFLVIIGFFLVVIFRRLKLWKKKTSAIQKKK 618 (638)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (638)
|.|...-+.-+.-.||+...|--.-+.++ +-+|.++|.||+++++-..-+|++-...+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~gmp~ld~~t~~----~q~~~~lI~F~iL~~ll~k~l~~PI~~~l~~R~ 64 (181)
T PRK13454 3 TTEVHAAAAAAGHAASAPGMPQLDFSTFP----NQIFWLLVTLVAIYFVLTRVALPRIGAVLAERQ 64 (181)
T ss_pred chHHHhhccccccccCCCCCCCCcHHhcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555667788999888766544443 234555666766666666667887776666543
No 56
>PRK06568 F0F1 ATP synthase subunit B; Validated
Probab=36.92 E-value=44 Score=32.40 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=26.1
Q ss_pred chHHHHHHHHHHHHHHHhhhhhhhhhHHHHHH
Q psy13008 587 CLFLVIIGFFLVVIFRRLKLWKKKTSAIQKKK 618 (638)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (638)
-+|.++|.|++++++-+...||.-+..+.++.
T Consensus 6 ~~fwq~I~FlIll~ll~kfawkPI~~~LeeR~ 37 (154)
T PRK06568 6 ESFWLAVSFVIFVYLIYRPAKKAILNSLDAKI 37 (154)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46888999998888888889999888876643
No 57
>PF10078 DUF2316: Uncharacterized protein conserved in bacteria (DUF2316); InterPro: IPR018757 Members of this family of hypothetical bacterial proteins have no known function.
Probab=36.54 E-value=1.7e+02 Score=25.97 Aligned_cols=57 Identities=18% Similarity=0.334 Sum_probs=41.3
Q ss_pred HHcCCCHHHHHHHcCCCCHHHHhhhcCcccccCCCCCCccCccchhhccchhhHHHHHhhhcCCC-CCCCC
Q psy13008 433 YKTGITLKEAAVKLGYLTEQEYDQWVKPEKMLGPEYHPYFKPDNNETIFHTEKVISQQILAAKVL-PPWSR 502 (638)
Q Consensus 433 ~~~g~~l~eal~~~~~Ls~eel~~llDP~~~vg~a~~~~~~~dv~~~~~~~~~~v~~~~~~~~~~-~~~~~ 502 (638)
...|.+..+++...+ +|.++++++|+-. ..+... +|..++.+++.....|.- .|.++
T Consensus 20 ~~~~ls~~~ia~dL~-~s~~~le~vL~l~-----------~~~~~~-vW~lRdyL~~~i~~~G~eP~PfS~ 77 (89)
T PF10078_consen 20 ELSGLSLEQIAADLG-TSPEHLEQVLNLK-----------QPFPED-VWILRDYLNDKIKEQGKEPVPFSA 77 (89)
T ss_pred HHcCCCHHHHHHHhC-CCHHHHHHHHcCC-----------CCCccc-chHHHHHHHHHHHHcCCCCCCeee
Confidence 356888888888888 9999999998764 233444 999999996666655544 44443
No 58
>PF06809 NPDC1: Neural proliferation differentiation control-1 protein (NPDC1); InterPro: IPR009635 This family consists of several neural proliferation differentiation control-1 (NPDC1) proteins. NPDC1 plays a role in the control of neural cell proliferation and differentiation. It has been suggested that NPDC1 may be involved in the development of several secretion glands. This family also contains the C-terminal region of the Caenorhabditis elegans protein CAB-1 (Q93249 from SWISSPROT) which is known to interact with AEX-3 [].; GO: 0016021 integral to membrane
Probab=31.89 E-value=98 Score=33.45 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=28.1
Q ss_pred CCCCchhhhhcccCCCCcccccccccccccCCCCCCC
Q psy13008 501 SRPSCPQARSIIRGRPSTLRYSARTQFVRSSQPARPK 537 (638)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (638)
.++...+++++.-....|+.|+++.|+...-+|.-+.
T Consensus 128 ~~~~~~~~~~r~~~~~~tl~~s~~~q~~~~~~p~~~~ 164 (341)
T PF06809_consen 128 TAQPQPEARQRLPEPAATLGFSERGQRLEPGLPSTRG 164 (341)
T ss_pred cCCCCchhhhccCCccccccccccCcccCCCCCCCCC
Confidence 4455567777777778999999999998777776543
No 59
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.95 E-value=59 Score=30.23 Aligned_cols=14 Identities=43% Similarity=0.762 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHH
Q psy13008 588 LFLVIIGFFLVVIF 601 (638)
Q Consensus 588 ~~~~~~~~~~~~~~ 601 (638)
||+|||.+|+++||
T Consensus 4 l~~iii~~i~l~~~ 17 (130)
T PF12273_consen 4 LFAIIIVAILLFLF 17 (130)
T ss_pred eHHHHHHHHHHHHH
Confidence 56666665555554
No 60
>PRK09174 F0F1 ATP synthase subunit B'; Validated
Probab=24.19 E-value=1.2e+02 Score=30.64 Aligned_cols=47 Identities=21% Similarity=0.357 Sum_probs=29.4
Q ss_pred CCCCCCCccccccccccccccchHHHHHHHHHHHHHHHhhhhhhhhhHHHH
Q psy13008 566 SHGNSSYPVHSQNSLSSMKNSCLFLVIIGFFLVVIFRRLKLWKKKTSAIQK 616 (638)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (638)
.||...+|.-..+++. +-+|..+|.|++++++-..-+|++-...+.+
T Consensus 38 ~~~~~~~p~~~~~~~~----~~l~w~~I~FliL~~lL~k~~~~pI~~vLe~ 84 (204)
T PRK09174 38 EHGSGVFPPFDSTHYA----SQLLWLAITFGLFYLFMSRVILPRIGGIIET 84 (204)
T ss_pred ccccCCCCCCcchhcc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3554446655554433 4567777777777777777788776655554
No 61
>PRK05759 F0F1 ATP synthase subunit B; Validated
Probab=23.77 E-value=94 Score=29.44 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=24.8
Q ss_pred ccchHHHHHHHHHHHHHHHhhhhhhhhhHHHHH
Q psy13008 585 NSCLFLVIIGFFLVVIFRRLKLWKKKTSAIQKK 617 (638)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (638)
|+-+|+++|.|++++++-+.-+|++-...+.+.
T Consensus 4 ~~~~~~~~i~Flil~~il~~~~~~pi~~~l~~R 36 (156)
T PRK05759 4 NGTLIGQLIAFLILVWFIMKFVWPPIMKALEER 36 (156)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 456788889988888887777888766666543
No 62
>PRK05414 urocanate hydratase; Provisional
Probab=22.78 E-value=61 Score=37.16 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=67.9
Q ss_pred hhccccChHHHHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCH--------HHHHHH------------------
Q psy13008 392 VTGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITL--------KEAAVK------------------ 445 (638)
Q Consensus 392 l~~L~Vn~erm~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l--------~eal~~------------------ 445 (638)
.=..+||++|+++.++..|.- .+++ .-++|-+.+.+|.++++++ .|++.+
T Consensus 193 ~i~vEvd~~ri~kR~~~gyld--~~~~--~Ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~pDlvtDQTSaH 268 (556)
T PRK05414 193 CLAVEVDESRIDKRLRTGYLD--EKAD--DLDEALALAEEAKAAGEPLSIGLLGNAADVLPELVRRGIRPDLVTDQTSAH 268 (556)
T ss_pred EEEEEECHHHHHHHHhCCcce--eEcC--CHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHcCCCCCccCcCcccc
Confidence 334689999999999876532 1221 3467788888888887763 222221
Q ss_pred ---cC----CCCHHHHhhhc--CcccccCCCCCCccC---------ccchhhccchhhHHHHHhhhcCCC
Q psy13008 446 ---LG----YLTEQEYDQWV--KPEKMLGPEYHPYFK---------PDNNETIFHTEKVISQQILAAKVL 497 (638)
Q Consensus 446 ---~~----~Ls~eel~~ll--DP~~~vg~a~~~~~~---------~dv~~~~~~~~~~v~~~~~~~~~~ 497 (638)
.+ .+|.||..++. ||..|...+.+.+.. +.=.. +|||.|++-+.....||-
T Consensus 269 dp~~GY~P~G~t~ee~~~lr~~dp~~~~~~~~~Sm~rhv~Am~~~~~~G~~-~fDYGN~~r~~a~~aG~~ 337 (556)
T PRK05414 269 DPLNGYLPVGWTLEEAAELRAEDPEEFVKAAKASMARHVEAMLAFQARGAY-VFDYGNNIRQMAFDAGVE 337 (556)
T ss_pred CcccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCe-eeeccHHHHHHHHHCCcc
Confidence 02 27888888877 999998876532221 11133 899999999888888883
No 63
>TIGR01228 hutU urocanate hydratase. This model represents the second of four enzymes involved in the degradation of histidine to glutamate.
Probab=21.45 E-value=68 Score=36.67 Aligned_cols=100 Identities=19% Similarity=0.165 Sum_probs=68.0
Q ss_pred hccccChHHHHHhhhhhhhHHHhcCCCCCHHHHHHHHHHHHHcCCCH--------HHHHHH-------------------
Q psy13008 393 TGILPNEDTIAKHVNDSLMLVTALNPHIGYDKAAEIAKHAYKTGITL--------KEAAVK------------------- 445 (638)
Q Consensus 393 ~~L~Vn~erm~~~l~~~~~lat~La~~ig~~~Ah~iv~~A~~~g~~l--------~eal~~------------------- 445 (638)
=..+||+.|+++.++..|.- .+++ .-++|-+.+.+|.++++++ .|++.+
T Consensus 185 i~vEvd~~ri~kR~~~gyld--~~~~--~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~r~i~pDlvtDQTSaHd 260 (545)
T TIGR01228 185 IAVEVDESRIDKRLETKYCD--EQTD--SLDEALARAEEAKAEGKPISIGLLGNAAEVLPELLKRGVVPDVVTDQTSAHD 260 (545)
T ss_pred EEEEECHHHHHHHHhcCcce--eEcC--CHHHHHHHHHHHHHcCCceEEEeeccHHHHHHHHHHcCCCCCCcCCCCcccC
Confidence 34689999999999876532 2221 3467778888888777763 222221
Q ss_pred --cC----CCCHHHHhhhc--CcccccCCCCCCccC---------ccchhhccchhhHHHHHhhhcCCC
Q psy13008 446 --LG----YLTEQEYDQWV--KPEKMLGPEYHPYFK---------PDNNETIFHTEKVISQQILAAKVL 497 (638)
Q Consensus 446 --~~----~Ls~eel~~ll--DP~~~vg~a~~~~~~---------~dv~~~~~~~~~~v~~~~~~~~~~ 497 (638)
.+ .+|.||..++. ||..|...+.+.+.. +.=.. +|||.+++-+.....|+-
T Consensus 261 p~~GY~P~g~t~ee~~~lr~~dp~~~~~~~~~Sm~rhv~Am~~~~~~Ga~-~fDYGN~~r~~a~~aG~~ 328 (545)
T TIGR01228 261 PLNGYIPEGYTVEDADKLRQEEPEAYVKAAKQSMAKHVRAMLAFQKQGSV-TFDYGNNIRQVAKEEGVE 328 (545)
T ss_pred cccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCe-eeeccHHHHHHHHHcCcc
Confidence 02 26889988887 999998887533222 11233 899999999988888883
Done!