RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13009
(515 letters)
>d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli
[TaxId: 562]}
Length = 247
Score = 66.8 bits (162), Expect = 4e-13
Identities = 42/238 (17%), Positives = 77/238 (32%), Gaps = 14/238 (5%)
Query: 37 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVST 90
AV + ++RHG+ +N + + D + L+ G S+A A GK LK Y F+ + S
Sbjct: 1 AVTKLVLVRHGESQWNKENRFTGWYDVD--LSEKGVSEAKAAGKLLKEEGYSFDFAYTSV 58
Query: 91 MSRAIETAQLISQSRS---QALATGKRLKVLDYPF--NKIHVSTMSRAIETAQLISQSLP 145
+ RAI T + + +L Y T + + +
Sbjct: 59 LKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGF 118
Query: 146 DVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFHRADPSQEHDSYE 205
V + +E P + E+ I+ + P +
Sbjct: 119 AVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDRVIPYWNETILPRMKSGERV 178
Query: 206 LLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIY-GDVGHMN 262
++ H N +R V E L ++ + N + R Y G+ +
Sbjct: 179 IIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEFDENFKPLKRYYLGNADEIA 236
Score = 48.3 bits (114), Expect = 7e-07
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 353 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVST 406
AV + ++RHG+ +N + + D + L+ G S+A GK LK Y F+ + S
Sbjct: 1 AVTKLVLVRHGESQWNKENRFTGWYDVD--LSEKGVSEAKAAGKLLKEEGYSFDFAYTSV 58
Query: 407 MSRAIETAQLISQ 419
+ RAI T +
Sbjct: 59 LKRAIHTLWNVLD 71
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR)
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 207
Score = 65.8 bits (159), Expect = 5e-13
Identities = 43/227 (18%), Positives = 81/227 (35%), Gaps = 37/227 (16%)
Query: 41 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRA 94
+++ RHG+ +N++ + D+ LT GR A+ GKRL+ ++ I+ ST RA
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSP--LTEKGRQDAMRLGKRLEAVELAA--IYTSTSGRA 59
Query: 95 IETAQLISQSRSQALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQCAL 154
+ETA+++ R + +RL+ + + +
Sbjct: 60 LETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDE-------------------IRQMD 100
Query: 155 LEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFHRADPSQEHDSYELLVCHANVI 214
P + Q +EA + L+V H V+
Sbjct: 101 PIAFDHFWQAPHLYAPQRGERFCDVQQRALEAVQSIVDRHEGETV------LIVTHGVVL 154
Query: 215 RYFVCRSMQFPAEA-WLRFSLYHASITWLQIYPNGRVTLRIYGDVGH 260
+ + P + W +Y S+T ++ G + + GDV H
Sbjct: 155 KTLMAAFKDTPLDHLWSPPYMYGTSVTIIE-VDGGTFHVAVEGDVSH 200
Score = 47.7 bits (112), Expect = 6e-07
Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 24/162 (14%)
Query: 357 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRA 410
+++ RHG+ +N++ + D+ LT GR A+ GKRL+ ++ I+ ST RA
Sbjct: 4 LYLTRHGETKWNVERRMQGWQDSP--LTEKGRQDAMRLGKRLEAVELAA--IYTSTSGRA 59
Query: 411 IETAQLISQSLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFH 470
+ETA+++ + L E + F + +
Sbjct: 60 LETAEIVRGGRLIPIYQDERLREIHLGDWEGKTHDEIRQMDPIAFDHFWQAPHLYAPQRG 119
Query: 471 RADPSQEHDSYE--------------LLVCHANVIRYFVCRI 498
+ + E L+V H V++ +
Sbjct: 120 ERFCDVQQRALEAVQSIVDRHEGETVLIVTHGVVLKTLMAAF 161
>d1bifa2 c.60.1.4 (A:250-468)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
phosphatase domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 219
Score = 66.1 bits (160), Expect = 6e-13
Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 9/151 (5%)
Query: 357 IFMIRHGQ--YNLDGKTDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRAIETA 414
I++ RHG+ NL G+ + L+P GR + + + + K+ S M R I+TA
Sbjct: 2 IYLCRHGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQTA 61
Query: 415 QLISQSLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQD-------GPRIEAAFRN 467
+ +S V + + H+ E QD
Sbjct: 62 EALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYPLEFALRDQDKYRYRYPKGESYEDLVQ 121
Query: 468 FFHRADPSQEHDSYELLVCHANVIRYFVCRI 498
E L++CH V+R +
Sbjct: 122 RLEPVIMELERQENVLVICHQAVMRCLLAYF 152
Score = 64.5 bits (156), Expect = 2e-12
Identities = 33/239 (13%), Positives = 68/239 (28%), Gaps = 34/239 (14%)
Query: 41 IFMIRHGQ--YNLDGKTDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRAIETA 98
I++ RHG+ NL G+ + L+P GR + + + + K+ S M R I+TA
Sbjct: 2 IYLCRHGESELNLKGRIGGDPGLSPRGREFSKHLAQFISDQNIKDLKVFTSQMKRTIQTA 61
Query: 99 QLISQSRSQALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQCALLEEG 158
+ +S Q + + +
Sbjct: 62 EALSVPYEQFKVLNEIDAGVCEEMTYEEIQDH---------------------------- 93
Query: 159 APVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFHRADPSQEHDSYELLVCHANVIRYFV 218
+ +++ E L++CH V+R +
Sbjct: 94 ----YPLEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLL 149
Query: 219 CRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIYGDVGHMNPDKMTSTSMQFPAEA 277
+ AE ++ L G I+ +V +N + ++ +
Sbjct: 150 AYFLDKAAEELPYLKCPLHTVLKLTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPS 208
>d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 248
Score = 62.3 bits (150), Expect = 2e-11
Identities = 38/225 (16%), Positives = 70/225 (31%), Gaps = 17/225 (7%)
Query: 41 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRA 94
+ M+RHG+ +N + + D + L G +A GK+LK L++ F+ + S ++R+
Sbjct: 4 LIMLRHGEGAWNKENRFCSWVDQK--LNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRS 61
Query: 95 IETAQLISQSRSQALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQCAL 154
I TA LI + Q + L+ + + Q
Sbjct: 62 IHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNVTP 121
Query: 155 LEEGAPVPPDPPVGHWQPEVHQFFQDGP---------RIEAAFRNFFHRADPSQEHDSYE 205
P + + + +E + R P
Sbjct: 122 PPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTI 181
Query: 206 LLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRV 250
L+ H N R + E + +L L++ N R
Sbjct: 182 LISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRA 226
Score = 44.6 bits (104), Expect = 1e-05
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 357 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRA 410
+ M+RHG+ +N + + D + L G +A + GK+LK L++ F+ + S ++R+
Sbjct: 4 LIMLRHGEGAWNKENRFCSWVDQK--LNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRS 61
Query: 411 IETAQLISQSLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFH 470
I TA L ++ E + G +R ++
Sbjct: 62 IHTAW---LILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYN 118
Query: 471 RADPSQEHDS 480
P E
Sbjct: 119 VTPPPIEESH 128
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 240
Score = 61.2 bits (147), Expect = 3e-11
Identities = 30/226 (13%), Positives = 67/226 (29%), Gaps = 13/226 (5%)
Query: 41 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRA 94
+ ++RHGQ +N D + L+ G+ +A G+ LK + ++ S +SRA
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVK--LSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRA 60
Query: 95 IETAQLISQSRSQ---ALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQ 151
I+TA + + + + RL Y + + + + V
Sbjct: 61 IQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPP 120
Query: 152 CALLEEGAPVPPDPPVGHWQPEVHQFFQDGPR--IEAAFRNFFHRADPSQEHDSYELLVC 209
+ + + I+ + ++
Sbjct: 121 PPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAA 180
Query: 210 HANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIY 255
H N +R V + ++ ++ N + + Y
Sbjct: 181 HGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSY 226
Score = 46.5 bits (109), Expect = 2e-06
Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 357 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRA 410
+ ++RHGQ +N D + L+ G+ +A G+ LK + ++ S +SRA
Sbjct: 3 LVLVRHGQSEWNEKNLFTGWVDVK--LSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRA 60
Query: 411 IETAQLISQ--SLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVH 452
I+TA + + +PV + L E +
Sbjct: 61 IQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKF 104
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 211
Score = 57.3 bits (137), Expect = 5e-10
Identities = 34/229 (14%), Positives = 69/229 (30%), Gaps = 32/229 (13%)
Query: 37 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVST 90
A + + RHG+ +N D L+ G +A G+RLK Y F+ S
Sbjct: 6 APNLLVLTRHGESEWNKLNLFTGWKDPA--LSETGIKEAKLGGERLKSRGYKFDIAFTSA 63
Query: 91 MSRAIETAQLISQSRSQALATGKRLKVLDYPFNKIHVSTMSRAIE--TAQLISQSLPDVP 148
+ RA +T Q+I + + L+ ++ ++ +
Sbjct: 64 LQRAQKTCQIILEEVGE--------PNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQ 115
Query: 149 VEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFHRADPSQEHDSYELLV 208
V+ + AP P R+ +++ L+
Sbjct: 116 VQIWRRSYDIAP-----------PNGESLKDTAERVLPYYKSTIVPH---ILKGEKVLIA 161
Query: 209 CHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIYGD 257
H N +R + + ++ L + +G+ + D
Sbjct: 162 AHGNSLRALIMDLEGLTGDQIVKRELATGVPIVYHLDKDGKYVSKELID 210
Score = 40.7 bits (94), Expect = 2e-04
Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 27/171 (15%)
Query: 353 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVST 406
A + + RHG+ +N D L+ G +A G+RLK Y F+ S
Sbjct: 6 APNLLVLTRHGESEWNKLNLFTGWKDPA--LSETGIKEAKLGGERLKSRGYKFDIAFTSA 63
Query: 407 MSRAIETAQLISQSLP---------DVPVEQCALLEEGAPVP------PDPPVGHWQPEV 451
+ RA +T Q+I + + + E+ +G V W+
Sbjct: 64 LQRAQKTCQIILEEVGEPNLETIKSEKLNERYYGDLQGLNKDDARKKWGAEQVQIWRRSY 123
Query: 452 HQFFQDG----PRIEAAFRNFFHRADPSQEHDSYELLVCHANVIRYFVCRI 498
+G E + P L+ H N +R + +
Sbjct: 124 DIAPPNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDL 174
>d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium
falciparum [TaxId: 5833]}
Length = 241
Score = 57.3 bits (137), Expect = 7e-10
Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 13/230 (5%)
Query: 37 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVST 90
+ ++RHG+ +N + K TD L+ G +A+A GK LK ++ F+ ++ S
Sbjct: 2 TTYTLVLLRHGESTWNKENKFTGWTDVP--LSEKGEEEAIAAGKYLKEKNFKFDVVYTSV 59
Query: 91 MSRAIETAQLISQSRSQALATGKRLKVLDY----PFNKIHVSTMSRAIETAQL-ISQSLP 145
+ RAI TA + ++ + L+ ++ S ++ Q+ I +
Sbjct: 60 LKRAICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEEQVKIWRRSY 119
Query: 146 DVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFFHRADPSQEHDSYE 205
D+P + + P + + +E +F P +
Sbjct: 120 DIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKV 179
Query: 206 LLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIY 255
++ H N +R V L ++ ++ N + Y
Sbjct: 180 MVAAHGNSLRGLVKHLDNLSEADVLELNIPTGVPLVYELDENLKPIKHYY 229
Score = 41.5 bits (96), Expect = 1e-04
Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 52/196 (26%)
Query: 353 AVRNIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVST 406
+ ++RHG+ +N + K TD L+ G +A+ GK LK ++ F+ ++ S
Sbjct: 2 TTYTLVLLRHGESTWNKENKFTGWTDVP--LSEKGEEEAIAAGKYLKEKNFKFDVVYTSV 59
Query: 407 MSRAIETAQLISQSLP--DVPVEQCALLEE--------------------------GAPV 438
+ RAI TA + ++ VPV + L E
Sbjct: 60 LKRAICTAWNVLKTADLLHVPVVKTWRLNERHYGSLQGLNKSETAKKYGEEQVKIWRRSY 119
Query: 439 PPDPPVGHWQPEVHQFFQDGPR----------------IEAAFRNFFHRADPSQEHDSYE 482
PP + + +E +F P +
Sbjct: 120 DIPPPKLDKEDNRWPGHNVVYKNVPKDALPFTECLKDTVERVLPFWFDHIAPDILANKKV 179
Query: 483 LLVCHANVIRYFVCRI 498
++ H N +R V +
Sbjct: 180 MVAAHGNSLRGLVKHL 195
>d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 243
Score = 56.5 bits (135), Expect = 1e-09
Identities = 38/232 (16%), Positives = 72/232 (31%), Gaps = 21/232 (9%)
Query: 41 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRA 94
+ ++RHG+ +N D LT G+++A+ +G+ + D + ++ S + RA
Sbjct: 6 LVLLRHGESDWNALNLFTGWVDVG--LTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRA 63
Query: 95 IETAQLISQSRSQALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQCAL 154
I TA L S + +R L N+ H + + + +
Sbjct: 64 ITTAHLALDSADRLWIPVRRSWRL----NERHYGALQGLDKAETKARYGEEQFMAWRRSY 119
Query: 155 LEEGAPVPPDPPVGHWQPEVHQFFQDGP-------RIEAAFRNFFHRADPSQEHDSYELL 207
P+ + GP + F L+
Sbjct: 120 DTPPPPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYFTDVIVGDLRVGKTVLI 179
Query: 208 VCHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLR--IYGD 257
V H N +R V Q + + ++ + R +R Y D
Sbjct: 180 VAHGNSLRALVKHLDQMSDDEIVGLNIPTGIPLRYDLDSAMRPLVRGGTYLD 231
Score = 45.4 bits (106), Expect = 6e-06
Identities = 31/160 (19%), Positives = 57/160 (35%), Gaps = 20/160 (12%)
Query: 357 IFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRA 410
+ ++RHG+ +N D LT G+++A+ +G+ + D + ++ S + RA
Sbjct: 6 LVLLRHGESDWNALNLFTGWVDVG--LTDKGQAEAVRSGELIAEHDLLPDVLYTSLLRRA 63
Query: 411 IETAQLISQSLPDVPVEQC----------ALLEEGAPVPPDPPVGHWQPEVHQFFQDGPR 460
I TA L S + + L+ G Q + D P
Sbjct: 64 ITTAHLALDSADRLWIPVRRSWRLNERHYGALQGLDKAETKARYGEEQFMAWRRSYDTPP 123
Query: 461 IEAAFRNFFHRADPSQEHDSY--ELLVCHANVIRYFVCRI 498
+ F + + D L C A+V+ F+
Sbjct: 124 PPIERGSQFSQDADPRYADIGGGPLTECLADVVARFLPYF 163
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase
{Thermus thermophilus [TaxId: 274]}
Length = 171
Score = 35.4 bits (80), Expect = 0.006
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 12/147 (8%)
Query: 356 NIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSR 409
++++RHG+ +N +G+ TD LT G +QA L +R
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP--LTAEGEAQARRLKGAL---PSLPAFSSDLLRAR 56
Query: 410 AIETAQLISQSLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQDGPRIEAAFRNFF 469
S L E EGA + + + P E+
Sbjct: 57 RTAELAGFSPRLYPELREIHFGALEGAL-WETLDPRYKEALLRFQGFHPPGGESLSAFQE 115
Query: 470 HRADPSQEHDSYELLVCHANVIRYFVC 496
+ + +L H V+R +
Sbjct: 116 RVFRFLEGLKAPAVLFTHGGVVRAVLR 142
Score = 28.1 bits (61), Expect = 1.8
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
Query: 40 NIFMIRHGQ--YNLDGK----TDAERVLTPLGRSQA 69
++++RHG+ +N +G+ TD LT G +QA
Sbjct: 2 ELWLVRHGETLWNREGRLLGWTDLP--LTAEGEAQA 35
>d1ihpa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus ficuum [TaxId: 5058]}
Length = 438
Score = 30.2 bits (67), Expect = 0.61
Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 5/50 (10%)
Query: 377 LTPLGRSQALDTGKRLKVL---DYPFNKIHV--STMSRAIETAQLISQSL 421
LTP G + +++G + + S SR I + + +
Sbjct: 99 LTPFGEQELVNSGIKFYQRYESLTRNIVPFIRSSGSSRVIASGKKFIEGF 148
Score = 27.9 bits (61), Expect = 3.7
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 61 LTPLGRSQALATGKRLKVL---DYPFNKIHV--STMSRAIETAQLISQ 103
LTP G + + +G + + S SR I + + +
Sbjct: 99 LTPFGEQELVNSGIKFYQRYESLTRNIVPFIRSSGSSRVIASGKKFIE 146
>d1sva1_ b.121.6.1 (1:) Polyomavirus coat proteins {Simian virus 40,
Sv40 [TaxId: 10633]}
Length = 348
Score = 29.8 bits (67), Expect = 0.74
Identities = 14/73 (19%), Positives = 25/73 (34%)
Query: 370 KTDAERVLTPLGRSQALDTGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQC 429
T + L R + KR YP + + ++R + VE+
Sbjct: 259 NTSGTQQWKGLPRYFKITLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMIGMSSQVEEV 318
Query: 430 ALLEEGAPVPPDP 442
+ E+ +P DP
Sbjct: 319 RVYEDTEELPGDP 331
Score = 26.4 bits (58), Expect = 9.2
Identities = 11/53 (20%), Positives = 20/53 (37%)
Query: 113 KRLKVLDYPFNKIHVSTMSRAIETAQLISQSLPDVPVEQCALLEEGAPVPPDP 165
KR YP + + ++R + VE+ + E+ +P DP
Sbjct: 279 KRSVKNPYPISFLLSDLINRRTQRVDGQPMIGMSSQVEEVRVYEDTEELPGDP 331
>d1qwoa_ c.60.1.2 (A:) Phytase
(myo-inositol-hexakisphosphate-3-phosphohydrolase)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 435
Score = 29.8 bits (66), Expect = 0.86
Identities = 10/69 (14%), Positives = 19/69 (27%), Gaps = 5/69 (7%)
Query: 377 LTPLGRSQALDTGKRLK---VLDYPFNKIHVSTMS--RAIETAQLISQSLPDVPVEQCAL 431
LTP G Q +++G + + R I + + + +
Sbjct: 98 LTPFGEQQLVNSGIKFYQRYKALARSVVPFIRASGSDRVIASGEKFIEGFQQAKLADPGA 157
Query: 432 LEEGAPVPP 440
AP
Sbjct: 158 TNRAAPAIS 166
Score = 28.3 bits (62), Expect = 2.4
Identities = 11/77 (14%), Positives = 20/77 (25%), Gaps = 5/77 (6%)
Query: 61 LTPLGRSQALATGKRLK---VLDYPFNKIHVSTMS--RAIETAQLISQSRSQALATGKRL 115
LTP G Q + +G + + R I + + + QA
Sbjct: 98 LTPFGEQQLVNSGIKFYQRYKALARSVVPFIRASGSDRVIASGEKFIEGFQQAKLADPGA 157
Query: 116 KVLDYPFNKIHVSTMSR 132
P + +
Sbjct: 158 TNRAAPAISVIIPESET 174
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus
aureus [TaxId: 1280]}
Length = 130
Score = 27.9 bits (61), Expect = 1.3
Identities = 13/79 (16%), Positives = 22/79 (27%), Gaps = 7/79 (8%)
Query: 206 LLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASITWLQIYPNGRVTLRIYGDVGHMNPDK 265
+ N RS Q AE W + L + V + + ++ D
Sbjct: 6 YFISTGNS-----ARS-QM-AEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDI 58
Query: 266 MTSTSMQFPAEAWLRFSLY 284
TS + + L
Sbjct: 59 SNHTSDLIDNDILKQSDLV 77
>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 342
Score = 28.3 bits (62), Expect = 2.3
Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 9/54 (16%)
Query: 377 LTPLGRSQALDTGKRLK---------VLDYPFNKIHVSTMSRAIETAQLISQSL 421
LT LG Q + G+ ++ + I + + R + +A +L
Sbjct: 38 LTQLGMEQHYELGEYIRKRYRKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAAL 91
Score = 27.1 bits (59), Expect = 5.4
Identities = 12/80 (15%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Query: 61 LTPLGRSQALATGKRLK---------VLDYPFNKIHVSTMSRAIETAQLISQSRSQALAT 111
LT LG Q G+ ++ + I + + R + +A +
Sbjct: 38 LTQLGMEQHYELGEYIRKRYRKFLNESYKHEQVYIRSTDVDRTLMSAMTNLAALFPPEGV 97
Query: 112 GKRLKVLDYPFNKIHVSTMS 131
+L + +H +S
Sbjct: 98 SIWNPILLWQPIPVHTVPLS 117
>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli
[TaxId: 562]}
Length = 391
Score = 27.7 bits (60), Expect = 3.6
Identities = 14/82 (17%), Positives = 21/82 (25%), Gaps = 14/82 (17%)
Query: 377 LTPLGRSQALDTGKRLK---------VLDYPFNKIHVSTMS----RAIETAQLISQSL-P 422
LT G + G ++ V + R + TAQ P
Sbjct: 49 LTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFP 108
Query: 423 DVPVEQCALLEEGAPVPPDPPV 444
+ + G P PV
Sbjct: 109 GCDIPVHHQEKMGTMDPTFNPV 130
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 27.6 bits (59), Expect = 3.8
Identities = 21/256 (8%), Positives = 58/256 (22%), Gaps = 13/256 (5%)
Query: 61 LTPLGRSQALATGKRLKVLDYPFNKIHVSTMSRAIETAQLISQSRSQALATGKRLKVLDY 120
L+ ++ L ++ +V+ + + + S AL L L+
Sbjct: 14 LSDARWAELLPLLQQCQVVRLDDCGLTEARC-----------KDISSALRVNPALAELNL 62
Query: 121 PFNKIHVSTMSRAIETAQLISQSLPDVPVEQCALLEEGAPVPPDPPVGHWQPEVHQFFQD 180
N++ + ++ Q S + + ++ C L G V + +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122
Query: 181 GPRIEAAFRNFFHRADPSQEHDSYELLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASIT 240
+ +L + + ++ L ++
Sbjct: 123 LLGDA--GLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND 180
Query: 241 WLQIYPNGRVTLRIYGDVGHMNPDKMTSTSMQFPAEAWLRFSLYHASITWLQIYPNGRVT 300
+ + AS+ L + N
Sbjct: 181 INEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 240
Query: 301 LRIYGDVGHMNPDKMT 316
+ + +
Sbjct: 241 VGMAELCPGLLHPSSR 256
>d2qgma1 c.150.1.3 (A:33-445) Succinoglycan biosynthesis protein
BC3205 {Bacillus cereus [TaxId: 1396]}
Length = 413
Score = 27.3 bits (60), Expect = 5.3
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 8/102 (7%)
Query: 183 RIEAAFRNFFHRADPSQEHDSYELLVCHANVIRYFVCRSMQFPAEAWLRFSLYHASIT-- 240
R+ ++ +A+ Y A+ I F +M P + L+ +
Sbjct: 200 RVARLLKDENEQANTEIIPSEYIWAKATASAIEKF--TTMLLPNDYPSIIKLHEQYLADH 257
Query: 241 --WLQIYPNGRVTLRIYGDVGHMNPDKMTSTSMQFPAEAWLR 280
W Q G+ ++ H+ + + A +L+
Sbjct: 258 AMWAQETFGGKTM--VWAHNIHIAKGIIDEKLYPYVAGQFLK 297
>d3c9fa1 d.114.1.1 (A:338-561) 5'-nucleotidase (syn. UDP-sugar
hydrolase), C-terminal domain {Candida albicans [TaxId:
5476]}
Length = 224
Score = 26.5 bits (58), Expect = 7.4
Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 16/95 (16%)
Query: 230 LRFSLYHASITWLQIY-----PNGRVTLRIYGDVGHMNPDKM------TSTSMQFPAEAW 278
+R+ LY T + N V + + V K+ +++ ++ P +
Sbjct: 53 IRYDLYKGPYTIDSKFIVSPFENIWVNITVPKSVATKVAAKLNDADYISASRLKPPHQYD 112
Query: 279 LRFSLYHAS-----ITWLQIYPNGRVTLRIYGDVG 308
L+ S + P G VT +G G
Sbjct: 113 LQVQDLSTSPHQAHFEMQEKLPKGYVTHDDFGADG 147
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 201
Score = 26.0 bits (57), Expect = 9.5
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 15/92 (16%)
Query: 252 LRIYGDVGHMNPDKMTS-TSMQFPAEAWLRFSL--------------YHASITWLQIYPN 296
L G+ N +T ++P L S+ H T + +
Sbjct: 42 LTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHIHPRATEIGMVMK 101
Query: 297 GRVTLRIYGDVGHMNPDKMTSTREGEYLVHPK 328
G + + I G + N R GE V P+
Sbjct: 102 GELLVGILGSLDSGNKLYSRVVRAGETFVIPR 133
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.136 0.413
Gapped
Lambda K H
0.267 0.0566 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,007,264
Number of extensions: 96726
Number of successful extensions: 325
Number of sequences better than 10.0: 1
Number of HSP's gapped: 296
Number of HSP's successfully gapped: 37
Length of query: 515
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 426
Effective length of database: 1,185,626
Effective search space: 505076676
Effective search space used: 505076676
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.3 bits)