Query psy1301
Match_columns 429
No_of_seqs 174 out of 1985
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 17:02:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1301.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1301hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 100.0 2.9E-73 9.8E-78 557.6 35.6 402 21-427 5-477 (479)
2 3swz_A Steroid 17-alpha-hydrox 100.0 4.1E-70 1.4E-74 537.1 32.1 398 22-426 4-479 (494)
3 3e6i_A CYPIIE1, P450-J, cytoch 100.0 1.7E-69 5.8E-74 530.4 34.8 400 21-428 5-474 (476)
4 3pm0_A Cypib1, cytochrome P450 100.0 2.3E-70 8E-75 540.7 28.7 399 20-427 3-485 (507)
5 3ld6_A Lanosterol 14-alpha dem 100.0 2.1E-71 7.3E-76 541.3 20.5 394 26-427 11-455 (461)
6 1po5_A Cytochrome P450 2B4; ox 100.0 3E-68 1E-72 521.2 37.9 399 22-427 6-474 (476)
7 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.2E-68 7.6E-73 523.3 33.9 399 18-425 16-482 (482)
8 2fdv_A Cytochrome P450 2A6; CY 100.0 2.6E-68 9.1E-73 521.6 33.8 398 23-427 7-474 (476)
9 1r9o_A Cytochrome P450 2C9; mo 100.0 2E-68 7E-73 522.7 30.9 398 23-427 8-475 (477)
10 3nxu_A Cytochrome P450 3A4; al 100.0 4.1E-68 1.4E-72 521.8 33.0 395 26-428 14-477 (485)
11 3czh_A Cytochrome P450 2R1; vi 100.0 4.6E-68 1.6E-72 520.3 30.9 397 22-426 8-476 (481)
12 2hi4_A Cytochrome P450 1A2; CY 100.0 1.7E-67 5.7E-72 518.4 31.8 395 23-427 11-489 (495)
13 3s79_A Cytochrome P450 19A1; o 100.0 1.7E-66 5.9E-71 512.5 29.3 394 21-428 40-498 (503)
14 2ve3_A Putative cytochrome P45 100.0 2.8E-66 9.4E-71 502.6 25.0 393 22-426 8-444 (444)
15 3qz1_A Steroid 21-hydroxylase; 100.0 1.5E-65 5.2E-70 504.9 30.2 388 20-426 23-484 (496)
16 3i3k_A Lanosterol 14-alpha dem 100.0 2E-66 6.9E-71 506.4 20.1 391 22-424 7-451 (461)
17 3n9y_A Cholesterol SIDE-chain 100.0 5.1E-65 1.7E-69 500.1 29.5 398 21-427 4-476 (487)
18 3gw9_A Sterol 14alpha-demethyl 100.0 1.3E-65 4.5E-70 499.2 24.6 386 25-426 2-450 (450)
19 2cib_A Cytochrome P450 51; hem 100.0 1.6E-65 5.4E-70 498.9 22.0 393 26-427 4-450 (455)
20 3dbg_A Putative cytochrome P45 100.0 3.2E-65 1.1E-69 498.6 22.3 390 25-426 22-462 (467)
21 3dax_A Cytochrome P450 7A1; ch 100.0 5.9E-64 2E-68 493.0 23.9 399 20-425 7-485 (491)
22 2ij2_A Cytochrome P450 BM3; mo 100.0 4.6E-63 1.6E-67 483.4 25.3 388 26-428 3-454 (470)
23 3b6h_A Prostacyclin synthase; 100.0 1.1E-62 3.8E-67 484.7 28.1 401 19-426 11-490 (498)
24 3v8d_A Cholesterol 7-alpha-mon 100.0 1.3E-62 4.6E-67 483.2 24.3 395 20-425 7-485 (491)
25 3mdm_A Cholesterol 24-hydroxyl 100.0 1.1E-61 3.9E-66 472.2 28.7 373 47-427 10-443 (456)
26 3b98_A Prostaglandin I2 syntha 100.0 2.4E-62 8.2E-67 479.5 23.3 392 19-427 11-472 (475)
27 2cd8_A Cytochrome P450 monooxy 100.0 1.4E-57 4.9E-62 439.4 27.1 367 21-427 21-430 (436)
28 1n97_A CYP175A1; electron tran 100.0 4.7E-58 1.6E-62 436.9 14.3 356 29-426 2-387 (389)
29 1izo_A P450bsbeta, cytochrome 100.0 5.3E-56 1.8E-60 427.0 27.7 362 34-427 8-417 (417)
30 1jfb_A Nitric-oxide reductase 100.0 3.7E-55 1.3E-59 419.3 29.8 338 27-401 2-382 (404)
31 1ued_A P450 OXYC, P450 monooxy 100.0 8.5E-55 2.9E-59 416.5 27.5 352 24-422 8-406 (406)
32 1cpt_A Cytochrome P450-TERP; o 100.0 8.5E-55 2.9E-59 419.6 27.6 360 23-425 3-428 (428)
33 3awm_A Fatty acid alpha-hydrox 100.0 3.7E-55 1.3E-59 420.8 24.6 363 28-426 4-414 (415)
34 3dsk_A Cytochrome P450 74A, ch 100.0 5.2E-55 1.8E-59 429.7 24.8 374 22-402 24-473 (495)
35 2zbx_A Cytochrome P450-SU1; be 100.0 9.2E-54 3.2E-58 410.2 29.7 361 24-424 3-408 (412)
36 4fb2_A P450CIN; heme, monooxyg 100.0 2.2E-54 7.6E-59 412.9 25.3 347 42-427 16-395 (398)
37 3dan_A Cytochrome P450 74A2; A 100.0 2.5E-54 8.7E-59 422.4 24.9 373 20-403 3-456 (473)
38 2zwu_A Camphor 5-monooxygenase 100.0 9.3E-54 3.2E-58 410.0 26.5 367 20-428 5-413 (415)
39 3aba_A Cytochrome P450; oxidor 100.0 2E-53 6.7E-58 406.7 28.5 345 42-426 16-403 (403)
40 1s1f_A Putative cytochrome P45 100.0 7.8E-53 2.7E-57 402.9 31.6 355 25-423 7-405 (406)
41 3a4g_A Vitamin D hydroxylase; 100.0 1E-52 3.5E-57 402.4 29.7 345 42-427 17-403 (411)
42 3ejb_B Biotin biosynthesis cyt 100.0 1.8E-53 6.2E-58 407.6 23.8 344 42-426 10-397 (404)
43 3ivy_A Cytochrome P450 CYP125; 100.0 4.6E-53 1.6E-57 407.8 25.9 354 25-427 17-430 (433)
44 3oft_A Cytochrome P450, CYP101 100.0 4.6E-53 1.6E-57 403.7 25.6 340 47-423 24-395 (396)
45 3abb_A CYP105D6, cytochrome P4 100.0 3.7E-53 1.3E-57 405.6 24.5 345 41-426 20-408 (408)
46 2jjn_A Cytochrome P450 113A1; 100.0 4.3E-53 1.5E-57 405.6 23.7 360 16-426 9-407 (411)
47 3lxh_A Cytochrome P450; heme, 100.0 1.4E-52 4.7E-57 403.3 26.1 336 48-427 39-419 (421)
48 3nc3_A Cytochrome P450 CYPX; c 100.0 1.1E-53 3.8E-58 412.6 18.2 344 48-424 54-440 (441)
49 2z36_A MOXA, cytochrome P450 t 100.0 6.4E-52 2.2E-56 397.1 29.1 358 23-424 4-409 (413)
50 2dkk_A Cytochrome P450; CYP158 100.0 4.2E-52 1.4E-56 398.0 27.6 341 47-426 27-411 (411)
51 2y5n_A MYCG, P-450-like protei 100.0 1.1E-51 3.7E-56 395.9 30.0 343 42-422 34-417 (417)
52 2xbk_A PIMD protein; epoxidati 100.0 2E-51 7E-56 392.1 31.0 333 48-422 27-404 (404)
53 2z3t_A Cytochrome P450; monoxy 100.0 2.4E-52 8.2E-57 401.6 24.3 340 48-426 21-417 (425)
54 2uuq_A CYP130, cytochrome P450 100.0 1.4E-52 4.7E-57 401.9 22.3 341 47-425 25-413 (414)
55 3mgx_A Putative P450 monooxyge 100.0 1.1E-52 3.8E-57 402.3 21.1 332 47-425 37-415 (415)
56 1odo_A Putative cytochrome P45 100.0 6.3E-52 2.2E-56 397.0 25.4 344 42-424 12-407 (408)
57 1n40_A P450 MT2, cytochrome P4 100.0 1.2E-51 4.1E-56 393.4 27.2 334 48-422 17-396 (396)
58 1z8o_A 6-deoxyerythronolide B 100.0 9.2E-52 3.2E-56 395.4 25.7 337 42-422 11-402 (404)
59 3buj_A CALO2; heme, iron, meta 100.0 3.8E-52 1.3E-56 397.3 22.5 337 48-426 14-397 (397)
60 2xkr_A CYP142, putative cytoch 100.0 6.6E-52 2.2E-56 395.8 23.7 339 47-427 18-396 (398)
61 1gwi_A CYP154C1, cytochrome P4 100.0 2.6E-52 8.8E-57 399.8 20.5 346 42-426 14-410 (411)
62 3tyw_A Putative cytochrome P45 100.0 6.7E-51 2.3E-55 391.1 30.1 314 48-401 30-389 (417)
63 1q5d_A P450 epoxidase; cytochr 100.0 3.3E-52 1.1E-56 400.3 20.4 338 48-427 27-418 (419)
64 3tkt_A Cytochrome P450; aromat 100.0 1.2E-50 4.1E-55 392.6 27.4 336 49-424 47-449 (450)
65 3r9b_A Cytochrome P450 164A2; 100.0 2.7E-51 9.2E-56 394.3 21.5 334 47-426 29-418 (418)
66 1lfk_A OXYB, P450 monooxygenas 100.0 8.5E-51 2.9E-55 388.0 23.2 333 52-421 18-397 (398)
67 2wm5_A CYP124, putative cytoch 100.0 1.8E-50 6.2E-55 389.5 25.6 330 48-422 45-434 (435)
68 3rwl_A Cytochrome P450 alkane 100.0 6.3E-50 2.2E-54 384.7 27.5 335 47-424 38-426 (426)
69 3oo3_A OXY protein; cytochrome 100.0 1.4E-49 4.8E-54 378.0 28.4 331 48-422 13-384 (384)
70 4dnj_A Putative cytochrome P45 100.0 8.6E-49 3E-53 375.1 27.4 354 31-424 17-411 (412)
71 1io7_A Cytochrome P450 CYP119; 100.0 2E-49 6.7E-54 374.6 19.9 323 49-426 1-368 (368)
72 2rfb_A Cytochrome P450; heme, 100.0 3.7E-49 1.3E-53 369.0 19.9 296 58-403 2-326 (343)
73 3b4x_A 367AA long hypothetical 100.0 2E-48 6.8E-53 367.2 22.6 323 49-424 1-366 (367)
74 2wiy_A XPLA-heme, cytochrome P 100.0 1.7E-48 6E-53 371.2 19.8 336 48-422 21-393 (394)
75 3p3o_A Cytochrome P450; monoox 100.0 1.1E-48 3.7E-53 375.3 17.7 349 32-424 22-415 (416)
76 4dxy_A Cytochrome P450, CYP101 100.0 5.8E-43 2E-47 334.3 29.6 340 47-422 37-413 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.7E-43 6E-48 331.0 6.1 145 231-402 215-362 (381)
78 2diu_A KIAA0430 protein; struc 86.0 1.8 6.3E-05 30.7 5.6 65 35-100 12-78 (96)
79 2krb_A Eukaryotic translation 79.9 9.8 0.00033 25.5 7.6 59 36-96 5-75 (81)
80 3lqv_A PRE-mRNA branch site pr 79.1 11 0.00038 27.4 8.2 67 26-96 2-75 (115)
81 1s79_A Lupus LA protein; RRM, 74.8 11 0.00038 27.0 6.9 60 33-96 12-79 (103)
82 3s6e_A RNA-binding protein 39; 70.9 5.6 0.00019 29.3 4.5 72 27-98 2-85 (114)
83 1iqt_A AUF1, heterogeneous nuc 70.5 11 0.00037 24.7 5.7 56 36-95 3-67 (75)
84 2a3j_A U1 small nuclear ribonu 68.9 19 0.00066 26.9 7.3 66 33-98 30-102 (127)
85 2nlw_A Eukaryotic translation 68.5 22 0.00074 25.3 7.3 64 31-96 14-89 (105)
86 2mss_A Protein (musashi1); RNA 63.8 18 0.00063 23.5 5.8 57 36-96 3-68 (75)
87 2kxn_B Transformer-2 protein h 63.4 43 0.0015 24.9 9.0 65 29-97 43-117 (129)
88 1whx_A Hypothetical protein ri 62.4 32 0.0011 24.8 7.3 62 34-99 12-77 (111)
89 3beg_B Splicing factor, argini 61.1 27 0.00091 25.4 6.7 60 34-97 18-80 (115)
90 3d2w_A TAR DNA-binding protein 60.0 20 0.00068 24.7 5.5 55 27-85 6-64 (89)
91 3ns6_A Eukaryotic translation 59.7 29 0.001 24.3 6.6 62 34-95 8-81 (100)
92 2pe8_A Splicing factor 45; RRM 58.5 11 0.00038 27.1 4.1 69 28-98 4-86 (105)
93 2wbr_A GW182, gawky, LD47780P; 58.4 22 0.00075 24.7 5.2 60 32-95 7-70 (89)
94 2dnz_A Probable RNA-binding pr 56.5 45 0.0015 22.8 7.6 65 31-99 4-78 (95)
95 2cqc_A Arginine/serine-rich sp 56.5 37 0.0012 23.3 6.6 67 25-95 8-84 (95)
96 2cq3_A RNA-binding protein 9; 55.9 43 0.0015 23.4 7.0 65 29-97 12-84 (103)
97 2dgx_A KIAA0430 protein; RRM d 55.4 24 0.00083 24.5 5.4 64 34-97 11-81 (96)
98 2d9p_A Polyadenylate-binding p 54.8 43 0.0015 23.4 6.8 69 26-98 9-85 (103)
99 2kvi_A Nuclear polyadenylated 54.0 47 0.0016 22.9 6.8 61 34-98 12-75 (96)
100 1x4d_A Matrin 3; structural ge 53.8 31 0.0011 24.6 5.7 73 24-99 7-85 (102)
101 1nu4_A U1A RNA binding domain; 53.5 26 0.00088 24.2 5.3 65 32-96 8-79 (97)
102 2do4_A Squamous cell carcinoma 52.8 51 0.0017 22.9 6.9 64 30-97 15-87 (100)
103 3ex7_B RNA-binding protein 8A; 52.5 65 0.0022 23.5 7.9 62 34-99 24-95 (126)
104 1wi8_A EIF-4B, eukaryotic tran 52.2 43 0.0015 23.5 6.4 69 24-97 7-85 (104)
105 2la6_A RNA-binding protein FUS 51.9 51 0.0017 22.8 6.7 65 28-96 9-91 (99)
106 1x4c_A Splicing factor, argini 50.7 63 0.0022 22.8 7.2 58 34-95 17-77 (108)
107 1x4h_A RNA-binding protein 28; 50.5 64 0.0022 22.8 7.9 56 29-88 12-76 (111)
108 4fxv_A ELAV-like protein 1; RN 50.4 32 0.0011 24.2 5.3 58 35-96 22-89 (99)
109 4f25_A Polyadenylate-binding p 50.1 29 0.001 25.1 5.3 59 35-97 8-74 (115)
110 3mdf_A Peptidyl-prolyl CIS-tra 49.1 55 0.0019 21.7 6.5 61 31-95 6-76 (85)
111 1p27_B RNA-binding protein 8A; 48.8 53 0.0018 23.0 6.5 60 34-97 25-94 (106)
112 1x5p_A Negative elongation fac 48.3 61 0.0021 22.3 6.6 63 28-96 11-77 (97)
113 2dhg_A TRNA selenocysteine ass 48.3 66 0.0023 22.4 8.1 67 28-98 5-82 (104)
114 1whw_A Hypothetical protein ri 47.3 62 0.0021 22.3 6.6 62 32-97 8-79 (99)
115 4a8x_A RNA-binding protein wit 46.9 57 0.0019 21.7 6.2 58 35-96 7-75 (88)
116 2hvz_A Splicing factor, argini 46.9 45 0.0015 23.2 5.8 59 36-98 4-67 (101)
117 3s8s_A Histone-lysine N-methyl 46.8 36 0.0012 24.5 5.2 60 33-96 7-76 (110)
118 1x5u_A Splicing factor 3B subu 46.4 72 0.0025 22.2 8.6 64 31-98 14-87 (105)
119 2jrs_A RNA-binding protein 39; 46.4 73 0.0025 22.6 6.9 60 34-97 28-97 (108)
120 2cq4_A RNA binding motif prote 46.3 40 0.0014 24.1 5.6 55 35-93 28-91 (114)
121 2dgs_A DAZ-associated protein 45.9 71 0.0024 22.0 7.9 64 31-98 9-81 (99)
122 3ucg_A Polyadenylate-binding p 45.4 50 0.0017 22.2 5.7 57 36-96 10-75 (89)
123 2fy1_A RNA-binding motif prote 45.4 55 0.0019 23.7 6.2 62 33-98 8-78 (116)
124 3s7r_A Heterogeneous nuclear r 45.0 35 0.0012 22.9 4.8 59 31-93 10-77 (87)
125 3v4m_A Splicing factor U2AF 65 44.8 33 0.0011 24.5 4.8 68 31-98 4-89 (105)
126 2ytc_A PRE-mRNA-splicing facto 44.8 66 0.0022 21.3 7.4 53 32-88 12-67 (85)
127 2dgv_A HnRNP M, heterogeneous 44.4 70 0.0024 21.6 7.2 61 33-97 9-77 (92)
128 1x4e_A RNA binding motif, sing 44.2 36 0.0012 22.7 4.7 56 29-88 2-66 (85)
129 2jvr_A Nucleolar protein 3; RN 43.6 45 0.0015 24.1 5.3 60 33-96 29-95 (111)
130 2cq1_A PTB-like protein L; RRM 43.5 57 0.0019 23.0 5.8 54 30-87 13-69 (101)
131 2jwn_A Embryonic polyadenylate 43.4 38 0.0013 24.7 5.1 59 35-97 39-106 (124)
132 2cph_A RNA binding motif prote 43.3 82 0.0028 22.0 8.9 64 31-98 14-89 (107)
133 3md1_A Nuclear and cytoplasmic 43.2 44 0.0015 22.1 5.0 57 36-96 5-71 (83)
134 3ue2_A Poly(U)-binding-splicin 43.1 37 0.0013 24.9 4.8 69 31-99 19-102 (118)
135 1wg5_A Heterogeneous nuclear r 43.0 83 0.0028 22.0 7.1 62 32-97 15-85 (104)
136 1sjq_A Polypyrimidine tract-bi 42.9 68 0.0023 23.0 6.1 65 31-99 15-85 (105)
137 2e5h_A Zinc finger CCHC-type a 42.7 76 0.0026 21.5 7.3 56 29-88 13-77 (94)
138 3ulh_A THO complex subunit 4; 41.9 54 0.0018 23.1 5.6 60 32-95 29-97 (107)
139 2jvo_A Nucleolar protein 3; nu 41.5 50 0.0017 23.5 5.3 61 33-97 32-94 (108)
140 2i2y_A Fusion protein consists 41.5 1.1E+02 0.0038 23.0 8.0 64 31-98 72-140 (150)
141 2rs2_A Musashi-1, RNA-binding 41.4 66 0.0023 22.8 6.0 61 31-95 24-93 (109)
142 1p1t_A Cleavage stimulation fa 41.1 58 0.002 22.7 5.6 59 34-96 10-78 (104)
143 2cpj_A Non-POU domain-containi 40.6 67 0.0023 22.2 5.8 64 31-98 14-81 (99)
144 2la4_A Nuclear and cytoplasmic 40.6 68 0.0023 22.2 5.9 58 34-95 29-90 (101)
145 2dh8_A DAZ-associated protein 40.4 64 0.0022 22.6 5.8 63 30-96 14-85 (105)
146 2dnm_A SRP46 splicing factor; 40.2 90 0.0031 21.6 7.4 62 33-98 14-85 (103)
147 2cpf_A RNA binding motif prote 39.1 79 0.0027 21.6 6.0 61 33-97 6-79 (98)
148 1x4b_A Heterogeneous nuclear r 39.0 44 0.0015 24.0 4.8 59 34-96 29-96 (116)
149 2dit_A HIV TAT specific factor 39.0 62 0.0021 23.1 5.5 71 28-98 11-94 (112)
150 1wex_A Hypothetical protein (r 38.6 1E+02 0.0035 21.8 6.9 66 30-99 13-84 (104)
151 1x4g_A Nucleolysin TIAR; struc 38.4 90 0.0031 22.0 6.4 61 33-97 26-90 (109)
152 2ad9_A Polypyrimidine tract-bi 38.2 72 0.0025 23.4 5.7 67 29-99 28-100 (119)
153 3zzy_A Polypyrimidine tract-bi 38.0 56 0.0019 24.5 5.1 64 27-94 21-92 (130)
154 2x1f_A MRNA 3'-END-processing 37.9 95 0.0032 21.2 6.3 59 34-96 4-72 (96)
155 2div_A TRNA selenocysteine ass 37.8 81 0.0028 21.6 5.9 64 30-97 7-81 (99)
156 2d9o_A DNAJ (HSP40) homolog, s 37.7 1E+02 0.0036 21.6 6.4 48 50-98 31-82 (100)
157 2adc_A Polypyrimidine tract-bi 37.7 1.1E+02 0.0036 25.3 7.5 62 33-98 35-102 (229)
158 1oo0_B CG8781-PA, drosophila Y 37.7 92 0.0031 21.9 6.3 59 34-96 28-96 (110)
159 2err_A Ataxin-2-binding protei 37.1 39 0.0013 24.1 4.1 59 34-96 31-97 (109)
160 2f3j_A RNA and export factor b 37.0 1.4E+02 0.0049 23.5 7.8 59 35-97 91-158 (177)
161 2cqd_A RNA-binding region cont 36.8 88 0.003 22.3 6.1 63 31-97 16-87 (116)
162 2ywk_A Putative RNA-binding pr 36.5 60 0.0021 22.1 5.0 62 31-96 15-85 (95)
163 2cpi_A CCR4-NOT transcription 36.4 42 0.0014 24.0 4.2 64 30-97 13-92 (111)
164 1sjr_A Polypyrimidine tract-bi 36.1 89 0.003 24.5 6.2 61 29-93 41-109 (164)
165 2dgu_A Heterogeneous nuclear r 35.8 1.1E+02 0.0037 21.2 6.5 60 33-96 12-73 (103)
166 3n9u_C Cleavage and polyadenyl 35.3 67 0.0023 24.8 5.5 58 35-96 58-127 (156)
167 2bz2_A Negative elongation fac 35.2 68 0.0023 23.4 5.3 62 31-98 38-103 (121)
168 2xs2_A Deleted in azoospermia- 35.2 34 0.0012 23.9 3.5 58 34-96 11-76 (102)
169 3tyt_A Heterogeneous nuclear r 34.9 83 0.0028 25.6 6.3 62 33-97 5-71 (205)
170 3bs9_A Nucleolysin TIA-1 isofo 34.7 70 0.0024 21.2 5.0 58 34-95 8-75 (87)
171 1uaw_A Mouse-musashi-1; RNP-ty 34.0 59 0.002 21.0 4.4 57 36-96 4-69 (77)
172 2xnq_A Nuclear polyadenylated 33.6 1.2E+02 0.004 20.9 6.6 58 34-95 24-84 (97)
173 3p5t_L Cleavage and polyadenyl 33.5 65 0.0022 21.8 4.7 59 36-98 5-75 (90)
174 1why_A Hypothetical protein ri 33.2 1.1E+02 0.0039 20.8 9.3 61 30-94 15-79 (97)
175 1wf1_A RNA-binding protein RAL 33.1 1.3E+02 0.0043 21.2 6.8 63 31-97 26-91 (110)
176 2dnh_A Bruno-like 5, RNA bindi 32.6 1.2E+02 0.0042 20.9 7.4 61 31-95 14-83 (105)
177 1rk8_A CG8781-PA, CG8781-PA pr 32.5 83 0.0029 24.4 5.7 59 34-96 74-142 (165)
178 1jmt_A Splicing factor U2AF 35 32.5 65 0.0022 22.8 4.6 45 53-97 43-97 (104)
179 2dis_A Unnamed protein product 32.0 1.3E+02 0.0044 21.0 7.0 60 34-97 10-83 (109)
180 2e5i_A Heterogeneous nuclear r 31.9 1.4E+02 0.0048 22.0 6.5 56 36-95 29-89 (124)
181 2kn4_A Immunoglobulin G-bindin 31.6 1.7E+02 0.0057 22.2 7.5 64 31-98 69-142 (158)
182 3pgw_S U1-70K; protein-RNA com 31.1 91 0.0031 29.0 6.5 63 31-97 101-173 (437)
183 1x4a_A Splicing factor, argini 31.0 1.4E+02 0.0047 20.9 8.0 63 31-97 21-90 (109)
184 2voo_A Lupus LA protein; RNA-b 31.0 65 0.0022 26.0 4.9 59 35-97 112-178 (193)
185 2cpz_A CUG triplet repeat RNA- 30.8 1.4E+02 0.0047 21.2 6.4 61 33-97 26-96 (115)
186 2cqb_A Peptidyl-prolyl CIS-tra 30.7 1E+02 0.0035 21.2 5.5 63 30-96 10-82 (102)
187 2qfj_A FBP-interacting repress 30.5 1.6E+02 0.0055 23.5 7.5 59 35-97 31-99 (216)
188 2ku7_A MLL1 PHD3-CYP33 RRM chi 30.2 1.6E+02 0.0056 21.6 7.5 51 34-88 65-124 (140)
189 2dgo_A Cytotoxic granule-assoc 29.5 1.5E+02 0.0051 20.9 6.6 64 29-96 12-85 (115)
190 2dng_A Eukaryotic translation 29.1 1E+02 0.0035 21.3 5.3 67 26-97 9-84 (103)
191 2e5j_A Methenyltetrahydrofolat 28.9 1.4E+02 0.0047 20.3 7.3 61 33-97 20-85 (97)
192 2hzc_A Splicing factor U2AF 65 28.9 1.3E+02 0.0043 19.9 6.0 58 34-95 8-79 (87)
193 2khc_A Testis-specific RNP-typ 28.8 1.2E+02 0.004 21.7 5.7 56 35-94 43-108 (118)
194 3r27_A HnRNP L, heterogeneous 28.7 1.5E+02 0.0053 20.8 6.8 55 30-88 19-76 (100)
195 1h2v_Z 20 kDa nuclear CAP bind 28.6 93 0.0032 23.7 5.3 64 31-98 38-111 (156)
196 1x5s_A Cold-inducible RNA-bind 28.4 1.4E+02 0.0049 20.4 7.9 64 31-98 11-84 (102)
197 2dnq_A RNA-binding protein 4B; 28.2 1.4E+02 0.0046 20.0 8.1 65 30-98 6-72 (90)
198 2cjk_A Nuclear polyadenylated 27.9 1E+02 0.0035 23.5 5.5 60 34-97 89-157 (167)
199 1wf0_A TDP-43, TAR DNA-binding 27.4 69 0.0023 21.5 3.9 49 34-86 7-59 (88)
200 2e5g_A U6 snRNA-specific termi 27.3 1.4E+02 0.0049 20.1 5.7 59 35-97 11-73 (94)
201 2dgp_A Bruno-like 4, RNA bindi 27.2 1.6E+02 0.0054 20.4 6.7 55 30-88 11-74 (106)
202 2ki2_A SS-DNA binding protein 26.7 93 0.0032 20.8 4.5 57 36-97 5-71 (90)
203 2cpx_A Hypothetical protein FL 26.0 1.2E+02 0.0041 21.4 5.3 65 30-98 23-97 (115)
204 2kt5_A RNA and export factor-b 25.5 1.9E+02 0.0065 20.8 7.2 60 34-97 37-105 (124)
205 3q2s_C Cleavage and polyadenyl 25.3 1.3E+02 0.0045 24.9 6.0 58 35-96 71-140 (229)
206 1qm9_A Polypyrimidine tract-bi 24.7 1.8E+02 0.0061 22.9 6.6 60 36-98 7-71 (198)
207 3ctr_A Poly(A)-specific ribonu 24.5 60 0.0021 23.0 3.0 39 50-88 19-58 (101)
208 2cpy_A RNA-binding protein 12; 23.6 1.1E+02 0.0036 21.9 4.5 63 29-95 12-83 (114)
209 1m46_B IQ4, IQ4 motif from MYO 23.4 65 0.0022 15.6 2.0 12 258-269 8-19 (26)
210 3ijw_A Aminoglycoside N3-acety 23.2 41 0.0014 28.9 2.3 30 320-349 64-107 (268)
211 4f02_A Polyadenylate-binding p 23.0 1.2E+02 0.0041 24.5 5.3 64 28-95 11-84 (213)
212 2e44_A Insulin-like growth fac 23.0 1.8E+02 0.0061 19.6 9.1 62 32-97 15-83 (96)
213 2dgt_A RNA-binding protein 30; 22.9 1.8E+02 0.006 19.5 6.6 61 32-96 10-72 (92)
214 2cjk_A Nuclear polyadenylated 22.9 1.7E+02 0.0059 22.1 6.0 50 35-88 6-64 (167)
215 2cqi_A Nucleolysin TIAR; RNA r 22.8 1.9E+02 0.0065 19.8 7.0 62 31-96 14-83 (103)
216 2lea_A Serine/arginine-rich sp 22.8 2.3E+02 0.008 20.9 6.8 61 34-98 49-119 (135)
217 3md3_A Nuclear and cytoplasmic 22.4 1.2E+02 0.0042 22.8 5.0 57 36-96 4-69 (166)
218 2j76_E EIF-4B, EIF4B, eukaryot 22.4 1.2E+02 0.0042 20.8 4.6 58 35-97 22-89 (100)
219 1u6f_A Tcubp1, RNA-binding pro 22.3 2.3E+02 0.008 20.7 6.9 60 34-97 44-113 (139)
220 2cq2_A Hypothetical protein LO 22.0 2.3E+02 0.0078 20.5 7.1 60 30-93 23-88 (114)
221 1l3k_A Heterogeneous nuclear r 21.8 1.3E+02 0.0044 23.6 5.2 62 31-96 12-82 (196)
222 2dnp_A RNA-binding protein 14; 21.7 1.8E+02 0.0063 19.3 7.5 64 30-97 7-72 (90)
223 1b7f_A Protein (SXL-lethal pro 20.5 2.3E+02 0.008 21.3 6.4 59 35-97 6-74 (168)
224 2nyg_A YOKD protein; PFAM02522 20.3 48 0.0016 28.6 2.2 23 320-342 62-84 (273)
225 2ghp_A U4/U6 snRNA-associated 20.2 1.5E+02 0.0051 25.3 5.5 62 32-97 41-109 (292)
226 3pgw_A U1-A; protein-RNA compl 20.1 1.5E+02 0.0053 25.1 5.6 65 32-96 9-80 (282)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=2.9e-73 Score=557.55 Aligned_cols=402 Identities=24% Similarity=0.380 Sum_probs=287.6
Q ss_pred cccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc
Q psy1301 21 GERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS 100 (429)
Q Consensus 21 ~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~ 100 (429)
.++.+++||||++||+|||++++.. .+++..+.+|+++|||||++++|+.++|||+||+++++++.+++..|++|+...
T Consensus 5 ~ss~~kLPPGP~~lP~iGn~~~~~~-~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~ 83 (479)
T 3tbg_A 5 TSSKGKLPPGPLPLPGLGNLLHVDF-QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVP 83 (479)
T ss_dssp ----CCCCCCSCCBTTTBTGGGCCT-TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCG
T ss_pred CCCCCCCCCCCCCcCcccchHhhcC-CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchH
Confidence 3444579999999999999999865 589999999999999999999999999999999999999999888999887665
Q ss_pred ccccccCCCCccccc----chHHHHHHHHHHHhhhhhhhHHH-----Hh--------hhhhccc---chh-hHHHHHH--
Q psy1301 101 RYNDLFSGNRENCKK----LSQMSKAIRAFVMENLMNDRIVK-----YE--------RNERNNN---DEE-DYVDSLL-- 157 (429)
Q Consensus 101 ~~~~~~~~~~~~~~~----~~~w~~~lR~~~~~~~~~~~~~~-----~~--------~~~~~~~---~~~-~l~~~l~-- 157 (429)
....+..+....++. ...|+ ++|+++.+.+....+.. .. ....... ... +.+..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~g~~w~-~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (479)
T 3tbg_A 84 ITQILGFGPRSQGVFLARYGPAWR-EQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSN 162 (479)
T ss_dssp GGGGGTCBTTBCCSTTCCSSHHHH-HHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHH
T ss_pred HHHHhccCCCCCceeeCCCCHHHH-HHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHH
Confidence 544432222111221 23488 77887766654332211 10 0000000 011 2222222
Q ss_pred --HHHhcCCC----cccccHHHHHHhhhhhhc-Cccch---hhhHHHhhhhccCC----hhHHHHHH-------------
Q psy1301 158 --ERVYNNRD----KAKMDLNTALFSLEDIVG-GHTAI---SNFIMKTLGFLVNH----PNVQAKIQ------------- 210 (429)
Q Consensus 158 --~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~---~~~~p~l~~~~~~~----~~~~~~~~------------- 210 (429)
....++.. +.... ........... ..... ....|+. .+++.. ....+...
T Consensus 163 ~~~~~~fg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (479)
T 3tbg_A 163 VIASLTCGRRFEYDDPRFL--RLLDLAQEGLKEESGFLREVLNAVPVL-LHIPALAGKVLRFQKAFLTQLDELLTEHRMT 239 (479)
T ss_dssp HHHHHHHSCCCCTTCHHHH--HHHHHHHHHHHTTSSHHHHHHHHSGGG-GGSHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCcccccchhhh--hhhhhhhhhhhhhhhhhhhhhcccchh-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22233322 22111 22222222211 11101 1111111 111110 00111111
Q ss_pred --------HHHHHHHHHh----c----CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcc
Q psy1301 211 --------KEVDAITLRM----S----GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLI 273 (429)
Q Consensus 211 --------d~l~~ll~~~----~----~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~ 273 (429)
|.++.++... . ..+++++..++.++++ |+|||+++++|++++|++||++|+||++||+.+++.
T Consensus 240 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~ 319 (479)
T 3tbg_A 240 WDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319 (479)
T ss_dssp CCTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCS
T ss_pred hhcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhh
Confidence 1222222110 0 1178889888888866 999999999999999999999999999999999998
Q ss_pred CCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCC
Q psy1301 274 SRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFI 351 (429)
Q Consensus 274 ~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl 351 (429)
++.++.+++++||||+|||+||||+|| ++. .+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+
T Consensus 320 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl 399 (479)
T 3tbg_A 320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399 (479)
T ss_dssp SSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGB
T ss_pred ccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccC
Confidence 889999999999999999999999999 888 666788999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCC-cc-cccceeecCCceEEEEEeCCC
Q psy1301 352 NADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQY-KV-PIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 352 ~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~r~~ 427 (429)
++++...++.+|+|||+|+|+|+|++||++|+++++|.||++|+|++++|++. .. ...++++.|++++|+++||..
T Consensus 400 ~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~~~~v~~~pRs~ 477 (479)
T 3tbg_A 400 DAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPSPYELCAVPRHH 477 (479)
T ss_dssp CTTCCBCCCTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEECCCCBEEEEC--
T ss_pred CCCcccCCCCceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCCCeEEEEEECCC
Confidence 98777677889999999999999999999999999999999999999887643 23 455777888999999999975
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=4.1e-70 Score=537.09 Aligned_cols=398 Identities=25% Similarity=0.391 Sum_probs=293.6
Q ss_pred ccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccc
Q psy1301 22 ERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISR 101 (429)
Q Consensus 22 ~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~ 101 (429)
++..++||||++||++||++++.+.++++..+.+|+++|||||++++|+.++|||+||+++++++.+++..|++++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 44567899999999999999986534789999999999999999999999999999999999999999889998876644
Q ss_pred cccccC-CCCccccc-chHHHHHHHHHHHhhhhh--hhHHHHhhhhhcccchh-hHHHHHH-------------------
Q psy1301 102 YNDLFS-GNRENCKK-LSQMSKAIRAFVMENLMN--DRIVKYERNERNNNDEE-DYVDSLL------------------- 157 (429)
Q Consensus 102 ~~~~~~-~~~~~~~~-~~~w~~~lR~~~~~~~~~--~~~~~~~~~~~~~~~~~-~l~~~l~------------------- 157 (429)
...+.. +.+..... ...|+ ++|+++.+.|.. .....+ ++.+.+++ .+++.+.
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr-~~Rr~~~~~f~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~d 159 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQ-LHRRLAMATFALFKDGDQKL---EKIICQEISTLCDMLATHNGQSIDISFPVFVAVTN 159 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHH-HHHHHHHHHTTTTSSSTTCH---HHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHH-HHHHHHHHHHHHhcchHHHH---HHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHH
Confidence 332222 12111112 23487 788888776542 222223 22222222 3333222
Q ss_pred --HHHhcCCC----cccccHHHHHHhhhhh--hcCccchhhhHHHhhhhccCCh--h---HHHHH---------------
Q psy1301 158 --ERVYNNRD----KAKMDLNTALFSLEDI--VGGHTAISNFIMKTLGFLVNHP--N---VQAKI--------------- 209 (429)
Q Consensus 158 --~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~l~~~~~~~~--~---~~~~~--------------- 209 (429)
..+.|+.. +.... .+......+ ......+.+++|++ ++++... . ..+.+
T Consensus 160 vi~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l-~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (494)
T 3swz_A 160 VISLICFNTSYKNGDPELN--VIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF 236 (494)
T ss_dssp HHHHHHHSCCCCTTCTHHH--HHHHHHHHHHHHHCSSSSCCSSCGG-GTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHcCCcCCCCCHHHH--HHHHHHHHHHHhcccchHHHHHHHH-HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 12234432 11111 222222221 11112345566766 6666531 1 11111
Q ss_pred -----HHHHHHHHHHhc--------------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q psy1301 210 -----QKEVDAITLRMS--------------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDA 269 (429)
Q Consensus 210 -----~d~l~~ll~~~~--------------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~ 269 (429)
.|+++.+++... ..+++++...+.++++ |+|||+++++|++++|++||++|+|+++||++
T Consensus 237 ~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~ 316 (494)
T 3swz_A 237 RSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ 316 (494)
T ss_dssp CTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 256777776431 1267888888887766 99999999999999999999999999999999
Q ss_pred hhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCC
Q psy1301 270 ITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQP 347 (429)
Q Consensus 270 ~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~P 347 (429)
++|.++.++++++.+|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|
T Consensus 317 v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~P 396 (494)
T 3swz_A 317 NVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMP 396 (494)
T ss_dssp HTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCG
T ss_pred hcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCc
Confidence 9998888999999999999999999999999 887 89999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCc--cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCC-Ccc-cccceeecCCceEEEEE
Q psy1301 348 ERFINADGRI--VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ-YKV-PIGDLALPYNTFRFNFS 423 (429)
Q Consensus 348 eRfl~~~~~~--~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~ 423 (429)
|||+++++.. .....++|||.|+|.|+|++||.+|++++++.|+++|+|+++++.. +.. ...+++..|.+++|+++
T Consensus 397 eRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~ 476 (494)
T 3swz_A 397 ERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLIDSFKVKIK 476 (494)
T ss_dssp GGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEECCCCCEEEE
T ss_pred ccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecCCCcEEEEE
Confidence 9999865432 2346899999999999999999999999999999999999986543 333 44567788999999999
Q ss_pred eCC
Q psy1301 424 PRN 426 (429)
Q Consensus 424 ~r~ 426 (429)
+|.
T Consensus 477 ~R~ 479 (494)
T 3swz_A 477 VRQ 479 (494)
T ss_dssp ECH
T ss_pred EcC
Confidence 984
No 3
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=1.7e-69 Score=530.37 Aligned_cols=400 Identities=23% Similarity=0.394 Sum_probs=294.5
Q ss_pred cccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc
Q psy1301 21 GERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS 100 (429)
Q Consensus 21 ~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~ 100 (429)
.+++.++||||+++|++||++++.. .+++..+.+|+++||+||++++|+.++|+|+||+++++++.+++..|++++...
T Consensus 5 ~~~~~~lpPgP~~~PliG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~ 83 (476)
T 3e6i_A 5 TSSKGKLPPGPFPLPIIGNLFQLEL-KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP 83 (476)
T ss_dssp -----CCCCCCCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred ccCCCCCCcCCCCcccccChhhhcc-ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence 3556789999999999999999853 589999999999999999999999999999999999999999877898876655
Q ss_pred ccccccCCCCcccccchHHHHHHHHHHHhhhhhhhH--HHHhhhhhcccchh-hHHHH---------------------H
Q psy1301 101 RYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRI--VKYERNERNNNDEE-DYVDS---------------------L 156 (429)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~---------------------l 156 (429)
.+..+.++ +........|+ ++|+++.+.+....+ ..+ ++.+.+++ ++++. +
T Consensus 84 ~~~~~~~~-~l~~~~g~~w~-~~Rr~~~~~l~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dv 158 (476)
T 3e6i_A 84 AFHAHRDR-GIIFNNGPTWK-DIRRFSLTTLRNYGMGKQGN---ESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNV 158 (476)
T ss_dssp GGGGGTTS-SSTTCCSTTHH-HHHHHHHHHHHHTC-CCSHH---HHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHH
T ss_pred hhheecCC-CEEecCCcHHH-HHHHHHHHHHHhcCCCchHH---HHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHH
Confidence 44444433 22222334498 788887665543211 011 11111111 22222 2
Q ss_pred HHHHhcCCC----cccccHHHHHHhhhhhhc----CccchhhhHHHhhhhccCC-hh---HHHHH---------------
Q psy1301 157 LERVYNNRD----KAKMDLNTALFSLEDIVG----GHTAISNFIMKTLGFLVNH-PN---VQAKI--------------- 209 (429)
Q Consensus 157 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~l~~~~~~~-~~---~~~~~--------------- 209 (429)
.....|+.. +..+. .+...+..... ....+...+|.+..+++.. .+ ..+.+
T Consensus 159 i~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (476)
T 3e6i_A 159 IADILFRKHFDYNDEKFL--RLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSL 236 (476)
T ss_dssp HHHHHHSCCCCTTCHHHH--HHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCCCCCHHHH--HHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 222234432 22122 33333333311 1111234455333555432 11 11111
Q ss_pred -----HHHHHHHHHHhcC--------CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCC
Q psy1301 210 -----QKEVDAITLRMSG--------VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISR 275 (429)
Q Consensus 210 -----~d~l~~ll~~~~~--------~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~ 275 (429)
.|+++.++....+ .+++++..++.++++ |+|||+++++|++++|++||++|+||++||+++++.++
T Consensus 237 ~~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~ 316 (476)
T 3e6i_A 237 DPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR 316 (476)
T ss_dssp CTTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTS
T ss_pred CCCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCC
Confidence 2456666654221 277888888887766 99999999999999999999999999999999998777
Q ss_pred CCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCC
Q psy1301 276 DVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINA 353 (429)
Q Consensus 276 ~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~ 353 (429)
.++++++++||||+|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++
T Consensus 317 ~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~ 396 (476)
T 3e6i_A 317 IPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNE 396 (476)
T ss_dssp CCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCT
T ss_pred CCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCC
Confidence 8999999999999999999999999 886 99999999999999999999999999999999999999999999999987
Q ss_pred CCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCC-CCCCcc-c-ccceeecCCceEEEEEeCCCC
Q psy1301 354 DGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLP-GQQYKV-P-IGDLALPYNTFRFNFSPRNLR 428 (429)
Q Consensus 354 ~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~r~~~ 428 (429)
++....+..++|||.|+|.|+|++||.+|++++++.|+++|+|+++. +..+++ + ..+++..|.++++++++|+..
T Consensus 397 ~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~~ 474 (476)
T 3e6i_A 397 NGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIPPRYKLCVIPRSHH 474 (476)
T ss_dssp TSSBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEECCCCCEEEEECC--
T ss_pred CCCccCccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCCCCeEEEEEecccc
Confidence 65555667899999999999999999999999999999999999853 333443 3 367778889999999999753
No 4
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-70 Score=540.71 Aligned_cols=399 Identities=24% Similarity=0.424 Sum_probs=277.0
Q ss_pred ccccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCc
Q psy1301 20 IGERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNI 99 (429)
Q Consensus 20 ~~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~ 99 (429)
.++++.+.||||+++|++||++++.+ +++..+.+|+++||+||++++|+.++|+|+||+++++++.+++..|++++..
T Consensus 3 r~~~~~~~pPgP~~~P~iG~~~~~~~--~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~ 80 (507)
T 3pm0_A 3 KKTSSKGKPPGPFAWPLIGNAAAVGQ--AAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSF 80 (507)
T ss_dssp -------------------------C--CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCC
T ss_pred cccCCCCCCcCCCCCCeeCchhhcCc--cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcc
Confidence 34566789999999999999999987 9999999999999999999999999999999999999999888899888766
Q ss_pred cccccccCCCCcccc-cchHHHHHHHHHHHhhhhhhhHHH------Hhhhhhcccchh-hHHHHHHH-------------
Q psy1301 100 SRYNDLFSGNRENCK-KLSQMSKAIRAFVMENLMNDRIVK------YERNERNNNDEE-DYVDSLLE------------- 158 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~-~~~~w~~~lR~~~~~~~~~~~~~~------~~~~~~~~~~~~-~l~~~l~~------------- 158 (429)
.....+.++...... ....|+ ++|+++.+.+....... + ++.+.+++ ++++.+..
T Consensus 81 ~~~~~~~~g~~l~~~~~g~~w~-~~R~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~ 156 (507)
T 3pm0_A 81 ASFRVVSGGRSMAFGHYSEHWK-VQRRAAHSMMRNFFTRQPRSRQVL---EGHVLSEARELVALLVRGSADGAFLDPRPL 156 (507)
T ss_dssp HHHHHGGGGTCSSSSCSSHHHH-HHHHHHHHHHHHSTTSSTTHHHHH---HHHHHHHHHHHHHHHHHTTGGGCCBCCHHH
T ss_pred hHHHhhcCCCceEECCCChHHH-HHHHHHHHHHHHhcCCccchHHHH---HHHHHHHHHHHHHHHHhhcccCCCcChHHH
Confidence 544333333311111 234488 77888766543222111 2 22222333 33333322
Q ss_pred ----------HHhcCCC----cccccHHHHHHhhhhhh--cCccchhhhHHHhhhhccCC-----hh---HHHHH-----
Q psy1301 159 ----------RVYNNRD----KAKMDLNTALFSLEDIV--GGHTAISNFIMKTLGFLVNH-----PN---VQAKI----- 209 (429)
Q Consensus 159 ----------~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~l~~~~~~~-----~~---~~~~~----- 209 (429)
.+.|+.. +..+. .+...+..+. .....+..++|++ .+++.. ++ ..+.+
T Consensus 157 ~~~~~~dvi~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~~ 233 (507)
T 3pm0_A 157 TVVAVANVMSAVCFGCRYSHDDPEFR--ELLSHNEEFGRTVGAGSLVDVMPWL-QYFPNPVRTVFREFEQLNRNFSNFIL 233 (507)
T ss_dssp HHHHHHHHHHHHHTSCCCCTTCHHHH--HHTSCHHHHHHHHSTTCCTTTCGGG-GGSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccCCCCCHHHH--HHHHHHHHHHHhcccchHHHHhHHH-HHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 2244432 11121 3333333321 1112234455655 555432 11 11111
Q ss_pred ----------------HHHHHHHHHHhc------------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHH
Q psy1301 210 ----------------QKEVDAITLRMS------------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQ 260 (429)
Q Consensus 210 ----------------~d~l~~ll~~~~------------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~ 260 (429)
.|+++.++...+ ..+++++..++.++++ |+|||+++++|++++|++||++|
T Consensus 234 ~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~ 313 (507)
T 3pm0_A 234 DKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQ 313 (507)
T ss_dssp HHHHHHHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHH
Confidence 235556653221 1367778888887766 99999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCC
Q psy1301 261 AKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPEL 338 (429)
Q Consensus 261 ~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~ 338 (429)
+||++||+++++.++.++.+++++||||+|||+||||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++
T Consensus 314 ~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~ 393 (507)
T 3pm0_A 314 TRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393 (507)
T ss_dssp HHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTT
T ss_pred HHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCccc
Confidence 9999999999987788999999999999999999999999 886 89999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcc--CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcc-cccceeecC
Q psy1301 339 WSEPENFQPERFINADGRIV--KPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKV-PIGDLALPY 415 (429)
Q Consensus 339 ~~~p~~F~PeRfl~~~~~~~--~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~ 415 (429)
|+||++|+||||+++++... .+..++|||.|+|.|+|++||.+|++++++.|+++|+|++.++.++++ ...++++.|
T Consensus 394 ~~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p 473 (507)
T 3pm0_A 394 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKP 473 (507)
T ss_dssp CSSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEE
T ss_pred CCCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccC
Confidence 99999999999998654322 236899999999999999999999999999999999999987765554 445677778
Q ss_pred CceEEEEEeCCC
Q psy1301 416 NTFRFNFSPRNL 427 (429)
Q Consensus 416 ~~~~~~~~~r~~ 427 (429)
++++|++++|..
T Consensus 474 ~~~~v~~~~R~~ 485 (507)
T 3pm0_A 474 KSFKVNVTLRES 485 (507)
T ss_dssp CSCCEEEEESSC
T ss_pred CCcEEEEEEccc
Confidence 889999999964
No 5
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=2.1e-71 Score=541.34 Aligned_cols=394 Identities=14% Similarity=0.202 Sum_probs=291.9
Q ss_pred CCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccccc
Q psy1301 26 DLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYND 104 (429)
Q Consensus 26 ~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~ 104 (429)
+.||+|++ ||+|||++++.+ +|+.++.+|+++|||||++++|+.++|+|+||+++++++.+++..|+.++.+.....
T Consensus 11 ~~PP~~~~~lP~iG~~~~~~~--~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAFGK--SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHHHH--CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCcCeeeeHHHhhh--CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 46788765 999999999988 999999999999999999999999999999999999999998878877655443322
Q ss_pred -ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-------------hHHHHHH-------HHHhcC
Q psy1301 105 -LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-------------DYVDSLL-------ERVYNN 163 (429)
Q Consensus 105 -~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~l~~~l~-------~~~~~~ 163 (429)
+++...........|+ ++|+++.+.+....+..+ .+.+.+++ ++.+.+. ..+.++
T Consensus 89 ~~~g~~~~~~~~~~~~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG 164 (461)
T 3ld6_A 89 PVFGKGVAYDVPNPVFL-EQKKMLKSGLNIAHFKQH---VSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHG 164 (461)
T ss_dssp HHHCTTSGGGSCHHHHH-HHHHHHHHHSSHHHHHHH---HHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTC
T ss_pred ccCCCccccCCCcHHHH-HHHHhccccccHHHHhhh---hHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcC
Confidence 3332211112223487 788888888776666655 22211111 1221111 111333
Q ss_pred CCc-ccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC---hhHHHHHH------------------HHHHHHHHHhc
Q psy1301 164 RDK-AKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH---PNVQAKIQ------------------KEVDAITLRMS 221 (429)
Q Consensus 164 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~---~~~~~~~~------------------d~l~~ll~~~~ 221 (429)
.+. .... +.+...+..+..+.......+|.+ ...+.. .+..+++. |+++.+++...
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~ 242 (461)
T 3ld6_A 165 KEIRSQLN-EKVAQLYADLDGGFSHAAWLLPGW-LPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATY 242 (461)
T ss_dssp HHHHHTCC-HHHHHHHHHHHTTSSHHHHHSCTT-SCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHHHHHTCBC
T ss_pred cchhhhhh-hhhhhhhhhhhhhhhhHHHhhhhh-ccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhHHhhh
Confidence 211 0111 122222333322222222222221 111110 11222222 34555554322
Q ss_pred C----CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccC-CCCChhhhcCChhHHHHHHhh
Q psy1301 222 G----VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLIS-RDVTLADRKQMPYTEATILES 295 (429)
Q Consensus 222 ~----~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lpyl~a~i~Et 295 (429)
+ .+++++...+.++++ |+|||+++++|++++|++||++|+||++|+++++|.. ..++.+++++||||+|||+||
T Consensus 243 ~~~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~ 322 (461)
T 3ld6_A 243 KDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKET 322 (461)
T ss_dssp TTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhhhhheeeec
Confidence 2 278888888888766 9999999999999999999999999999999999854 567899999999999999999
Q ss_pred hcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCc
Q psy1301 296 IRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCM 374 (429)
Q Consensus 296 lRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~ 374 (429)
||++| ++...|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++++...++..|+|||+|+|+|+
T Consensus 323 lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pFG~G~r~C~ 402 (461)
T 3ld6_A 323 LRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAGRHRCI 402 (461)
T ss_dssp HHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTTCCGGGCCS
T ss_pred cccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccCCCcCcCCh
Confidence 99999 88899999999999999999999999999999999999999999999999987655556678999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeCCC
Q psy1301 375 GNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 375 G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
|++||.+|++++++.|+++|+|++++|..+.....+++.+|+++.|++++|+.
T Consensus 403 G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss 455 (461)
T 3ld6_A 403 GENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRST 455 (461)
T ss_dssp CHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC-
T ss_pred hHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCC
Confidence 99999999999999999999999998865544445667778899999999974
No 6
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=3e-68 Score=521.23 Aligned_cols=399 Identities=23% Similarity=0.392 Sum_probs=295.7
Q ss_pred ccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccc
Q psy1301 22 ERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISR 101 (429)
Q Consensus 22 ~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~ 101 (429)
++..+.||||+++|++||++++.. .+++..+.+|+++|||||++++|+.++|+|+||+++++++.++...|++++....
T Consensus 6 ~~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~ 84 (476)
T 1po5_A 6 SSKGKLPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAV 84 (476)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGG
T ss_pred cCCCCCCcCCCCCCccccHHhccC-CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 344578999999999999998833 4899999999999999999999999999999999999999877668877654433
Q ss_pred cccccCCCCcccccchHHHHHHHHHHHhhhhhh--hHHHHhhhhhcccchh-hHHHHHHH--------------------
Q psy1301 102 YNDLFSGNRENCKKLSQMSKAIRAFVMENLMND--RIVKYERNERNNNDEE-DYVDSLLE-------------------- 158 (429)
Q Consensus 102 ~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~--~~~~~~~~~~~~~~~~-~l~~~l~~-------------------- 158 (429)
+..+..+..........|+ ++|+++.+.+... ....+ ++.+.+++ ++++.+..
T Consensus 85 ~~~~~~~~~l~~~~g~~w~-~~Rr~~~~~f~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi 160 (476)
T 1po5_A 85 VDPIFQGYGVIFANGERWR-ALRRFSLATMRDFGMGKRSV---EERIQEEARCLVEELRKSKGALLDNTLLFHSITSNII 160 (476)
T ss_dssp GCSCCSSCCCCCSSHHHHH-HHHHHHHHHHHHSCCCHHHH---HHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHH
T ss_pred HHhhcCCCceEecCCcHHH-HHHHHHHHHHHHhCCChhHH---HHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHH
Confidence 3332223211122233488 7888877766544 22333 22222333 33333321
Q ss_pred -HHhcCCC----cccccHHHHHHhhhhhhcCcc----chhhhHHHhhhhccCCh-h---------------HHHHH----
Q psy1301 159 -RVYNNRD----KAKMDLNTALFSLEDIVGGHT----AISNFIMKTLGFLVNHP-N---------------VQAKI---- 209 (429)
Q Consensus 159 -~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~l~~~~~~~~-~---------------~~~~~---- 209 (429)
.+.||.+ +.++. ++.+.+........ .....+|++.++++... + ++++.
T Consensus 161 ~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 238 (476)
T 1po5_A 161 CSIVFGKRFDYKDPVFL--RLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD 238 (476)
T ss_dssp HHHHHSSCCCTTCHHHH--HHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHcCCCCCCCCHHHH--HHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2234432 22222 44444444321111 12345666335555421 1 11111
Q ss_pred ----HHHHHHHHHHhc------C--CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCC
Q psy1301 210 ----QKEVDAITLRMS------G--VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRD 276 (429)
Q Consensus 210 ----~d~l~~ll~~~~------~--~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~ 276 (429)
.|+++.++.... + .+++++..++.++++ |+|||+++++|++++|++||++|+||++||++++|.++.
T Consensus 239 ~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~ 318 (476)
T 1po5_A 239 PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP 318 (476)
T ss_dssp TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSC
T ss_pred CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence 256666664321 1 167788888888766 999999999999999999999999999999999987778
Q ss_pred CChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCC
Q psy1301 277 VTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINAD 354 (429)
Q Consensus 277 ~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 354 (429)
++.+++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++
T Consensus 319 ~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~ 398 (476)
T 1po5_A 319 PALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDAN 398 (476)
T ss_dssp CCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTT
T ss_pred CChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCC
Confidence 999999999999999999999999 885 999999999999999999999999999999999999999999999999765
Q ss_pred CCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCC-Ccc-c-ccceeecCCceEEEEEeCCC
Q psy1301 355 GRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ-YKV-P-IGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 355 ~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~r~~ 427 (429)
+....+..++|||.|+|.|+|++||++|++++++.|+++|+++++++.+ ++. . ..++++.|.++.+++++|..
T Consensus 399 ~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 474 (476)
T 1po5_A 399 GALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVPPSYQIRFLARHH 474 (476)
T ss_dssp SCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCCCCCCBEEEECC-
T ss_pred CCccCCccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecCcceEEEEEecCC
Confidence 4434457899999999999999999999999999999999999987653 223 3 45677778899999999964
No 7
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=2.2e-68 Score=523.27 Aligned_cols=399 Identities=20% Similarity=0.294 Sum_probs=290.0
Q ss_pred eeccccCCCCCCCCCCCCeeccccccCC---CCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCcccc
Q psy1301 18 TAIGERISDLTPMPWALPIIGHLHLLGQ---YEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFD 94 (429)
Q Consensus 18 ~~~~~~~~~~ppgP~~~P~lG~~~~~~~---~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~ 94 (429)
.+...++.+.+|||+++|++||++++.. .++++..+.+|+++|||||++++|+.++|+++||+++++++.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 4445667788999999999999987631 14789999999999999999999999999999999999999875 4787
Q ss_pred CCCCccc---ccccc-CCCCcccccchHHHHHHHHHHHhhh-hhhhHHHHhhhhhcccchh-hHHHHHHHH---------
Q psy1301 95 GRPNISR---YNDLF-SGNRENCKKLSQMSKAIRAFVMENL-MNDRIVKYERNERNNNDEE-DYVDSLLER--------- 159 (429)
Q Consensus 95 ~r~~~~~---~~~~~-~~~~~~~~~~~~w~~~lR~~~~~~~-~~~~~~~~~~~~~~~~~~~-~l~~~l~~~--------- 159 (429)
+++.... +.... .+.+........|+ ++|+.+.+.+ ....+..+ ++.+.+++ ++++.+...
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~-~~Rr~~~~~f~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~g~~vd 170 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGLMILEGQEWQ-RVRSAFQKKLMKPVEIMKL---DKKINEVLADFLERMDELCDERGRIPD 170 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCTTTCCHHHHH-HHHHHHHHHHTCHHHHGGG---HHHHHHHHHHHHHHHHHHCCTTSCCTT
T ss_pred CCCCchHHHHHHHhcCCCCCceeCCCchHH-HHHHHhhHHhcChHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 7764321 11111 12211122333488 7788887776 34444444 33333333 333333221
Q ss_pred ---------------HhcCCC----c----ccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC--hh---HHHHHHH
Q psy1301 160 ---------------VYNNRD----K----AKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH--PN---VQAKIQK 211 (429)
Q Consensus 160 ---------------~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~--~~---~~~~~~d 211 (429)
+.|+.+ + .... .+...+..+.........+.+++..+++.. ++ ..+.+.+
T Consensus 171 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~ 248 (482)
T 3k9v_A 171 LYSELNKWSFESICLVLYEKRFGLLQKETEEEAL--TFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFK 248 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSH--HHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccccCCCCCCcchHHH--HHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 133321 1 1122 344444443221111111112222333221 11 1111112
Q ss_pred --------------------HHHHHHHHhcCCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Q psy1301 212 --------------------EVDAITLRMSGVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAI 270 (429)
Q Consensus 212 --------------------~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~ 270 (429)
++..++.. .+.+++++..++.++++ |+|||+++++|++++|++||++|+||++||+++
T Consensus 249 ~~~~~i~~r~~~~~~~~~~d~l~~ll~~-~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v 327 (482)
T 3k9v_A 249 SVKPCIDNRLQRYSQQPGADFLCDIYQQ-DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSV 327 (482)
T ss_dssp HHHHHHHHHHHHTTTCTTSCHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCchHHHHHHHhc-cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 22222221 12378888888888876 999999999999999999999999999999999
Q ss_pred hccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCC
Q psy1301 271 TLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPER 349 (429)
Q Consensus 271 ~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeR 349 (429)
++.++.++++++.+||||+|||+|+||++| ++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|||
T Consensus 328 ~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR 407 (482)
T 3k9v_A 328 LPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPER 407 (482)
T ss_dssp SCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGG
T ss_pred hCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccc
Confidence 997788999999999999999999999999 8889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeC
Q psy1301 350 FINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPR 425 (429)
Q Consensus 350 fl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 425 (429)
|+++... ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.++++...++..++.+++|++++|
T Consensus 408 fl~~~~~-~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R 482 (482)
T 3k9v_A 408 WLQKEKK-INPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR 482 (482)
T ss_dssp GTCTTSC-CCGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred cCCCCCC-CCCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence 9986543 35578999999999999999999999999999999999999887666554445666778999999987
No 8
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=2.6e-68 Score=521.63 Aligned_cols=398 Identities=23% Similarity=0.405 Sum_probs=296.7
Q ss_pred cCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc
Q psy1301 23 RISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY 102 (429)
Q Consensus 23 ~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~ 102 (429)
+..++||||+++|++||++++.. .+++..+.+|+++|||||++++|+.++|+|+||+++++++.++...|++++....+
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~ 85 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATF 85 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCT-TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCC-cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHH
Confidence 34478999999999999999843 48999999999999999999999999999999999999998776678776543322
Q ss_pred ccccCCCCcccccchHHHHHHHHHHHhhhhhhhH--HHHhhhhhcccchh-hHHHHHHH---------------------
Q psy1301 103 NDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRI--VKYERNERNNNDEE-DYVDSLLE--------------------- 158 (429)
Q Consensus 103 ~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~l~~--------------------- 158 (429)
..+.++..........|+ ++|+++.+.|....+ ..+ ++.+.+++ .+++.+..
T Consensus 86 ~~~~~~~~l~~~~g~~~~-~~Rr~~~~~f~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~ 161 (476)
T 2fdv_A 86 DWVFKGYGVVFSNGERAK-QLRRFSIATLRDFGVGKRGI---EERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVIS 161 (476)
T ss_dssp HHHHTTCSSSSCCHHHHH-HHHHHHHHHHHHTTTTSHHH---HHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHH
T ss_pred hhhcCCCCeEecCchHHH-HHHHHHHHHHHHhCCChhhH---HHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHH
Confidence 222223211122233488 788888887765433 333 33333333 33333322
Q ss_pred HHhcCCC----cccccHHHHHHhhhhhhcCcc----chhhhHHHhhhhccCC-hh---------------HHHHH-----
Q psy1301 159 RVYNNRD----KAKMDLNTALFSLEDIVGGHT----AISNFIMKTLGFLVNH-PN---------------VQAKI----- 209 (429)
Q Consensus 159 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~l~~~~~~~-~~---------------~~~~~----- 209 (429)
.+.++.+ +.++. ++.+.+..+..... .+...+|++.++++.. ++ ++++.
T Consensus 162 ~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 239 (476)
T 2fdv_A 162 SIVFGDRFDYKDKEFL--SLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP 239 (476)
T ss_dssp HHHHSSCCCTTCHHHH--HHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred HHHcCCcCCCCCHHHH--HHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1134432 11222 44443433321101 1234566633555521 11 11111
Q ss_pred ---HHHHHHHHHHhc--------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCC
Q psy1301 210 ---QKEVDAITLRMS--------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDV 277 (429)
Q Consensus 210 ---~d~l~~ll~~~~--------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~ 277 (429)
.|+++.++.... ..+++++..++.++++ |+|||+++++|++++|++||++|+||++||+++++.++.+
T Consensus 240 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~ 319 (476)
T 2fdv_A 240 NSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQP 319 (476)
T ss_dssp TSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCC
T ss_pred CCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCC
Confidence 256777775421 1278888888888766 9999999999999999999999999999999999876779
Q ss_pred ChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCC
Q psy1301 278 TLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADG 355 (429)
Q Consensus 278 ~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~ 355 (429)
+.+++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++++
T Consensus 320 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~ 399 (476)
T 2fdv_A 320 KFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKG 399 (476)
T ss_dssp CGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTS
T ss_pred ChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCC
Confidence 99999999999999999999999 884 9999999999999999999999999999999999999999999999997654
Q ss_pred CccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCC-Ccc-c-ccceeecCCceEEEEEeCCC
Q psy1301 356 RIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ-YKV-P-IGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 356 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~r~~ 427 (429)
....+..++|||.|+|.|+|++||.+|++++++.|+++|+++++++.+ +++ . ..+++..|.++.+++++|..
T Consensus 400 ~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~R~~ 474 (476)
T 2fdv_A 400 QFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTMSFLPRHH 474 (476)
T ss_dssp CBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEECCCCCEEEEEC--
T ss_pred CCCCCcCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecCCceEEEEEeccc
Confidence 434567899999999999999999999999999999999999987652 233 3 45667777899999999964
No 9
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=2e-68 Score=522.66 Aligned_cols=398 Identities=25% Similarity=0.405 Sum_probs=285.5
Q ss_pred cCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc
Q psy1301 23 RISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY 102 (429)
Q Consensus 23 ~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~ 102 (429)
+..+.||||+++|++||++++.. .+++..+.+|+++|||||++++|+.++|+|+||+++++++.++...|++++....+
T Consensus 8 ~~~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~ 86 (477)
T 1r9o_A 8 GRGKLPPGPTPLPVIGNILQIGI-KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA 86 (477)
T ss_dssp -CCBCCCCSSSCC-----CCBCH-HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCC
T ss_pred CCCCCCCCCCCCceeccHhhcCC-CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhh
Confidence 34468999999999999998842 48999999999999999999999999999999999999998776678776543323
Q ss_pred ccccCCCCcccccchHHHHHHHHHHHhhhhhh--hHHHHhhhhhcccchh-hHHHHH-----------------H----H
Q psy1301 103 NDLFSGNRENCKKLSQMSKAIRAFVMENLMND--RIVKYERNERNNNDEE-DYVDSL-----------------L----E 158 (429)
Q Consensus 103 ~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~--~~~~~~~~~~~~~~~~-~l~~~l-----------------~----~ 158 (429)
.....+..........|+ ++|+++.+.+... ....+ ++.+.+++ .+++.+ . .
T Consensus 87 ~~~~~~~~l~~~~g~~w~-~~Rr~~~~~~~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~ 162 (477)
T 1r9o_A 87 ERANRGFGIVFSNGKKWK-EIRRFSLMTLRNFGMGKRSI---EDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVIC 162 (477)
T ss_dssp CTTTCTTSSTTCCHHHHH-HHHHHHHHHHTTSSSCSSCH---HHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHH
T ss_pred hhccCCCceEecCChHHH-HHHHHHHHHHHHhCCChHHH---HHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHH
Confidence 322223211122233488 7888877766543 11112 11122222 222222 2 2
Q ss_pred HHhcCCC----cccccHHHHHHhhhhhh---c-CccchhhhHHHhhhhccCC-hh---------------HHHHH-----
Q psy1301 159 RVYNNRD----KAKMDLNTALFSLEDIV---G-GHTAISNFIMKTLGFLVNH-PN---------------VQAKI----- 209 (429)
Q Consensus 159 ~~~~~~~----~~~~~~~~~~~~~~~~~---~-~~~~~~~~~p~l~~~~~~~-~~---------------~~~~~----- 209 (429)
.+.++.+ +.++. .+.+.+.... . ....+...+|++.++++.. ++ ++++.
T Consensus 163 ~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 240 (477)
T 1r9o_A 163 SIIFHKRFDYKDQQFL--NLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDM 240 (477)
T ss_dssp HHHHSCCCCTTCHHHH--HHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHccCcCCCCCHHHH--HHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 2244432 22222 3443333332 1 1111233456533444432 11 11111
Q ss_pred ---HHHHHHHHHHhc--------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCC
Q psy1301 210 ---QKEVDAITLRMS--------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDV 277 (429)
Q Consensus 210 ---~d~l~~ll~~~~--------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~ 277 (429)
.|+++.++.... ..+++++..++.++++ |+|||+++++|++++|++||++|+||++||++++|.++.+
T Consensus 241 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~ 320 (477)
T 1r9o_A 241 NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP 320 (477)
T ss_dssp TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCC
T ss_pred CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCC
Confidence 256777764321 1378888888888876 9999999999999999999999999999999999877789
Q ss_pred ChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCC
Q psy1301 278 TLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADG 355 (429)
Q Consensus 278 ~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~ 355 (429)
+.+++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++++
T Consensus 321 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~ 400 (477)
T 1r9o_A 321 CMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGG 400 (477)
T ss_dssp CGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTS
T ss_pred ChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCC
Confidence 99999999999999999999999 885 9999999999999999999999999999999999999999999999997654
Q ss_pred CccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCC-Ccc-c-ccceeecCCceEEEEEeCCC
Q psy1301 356 RIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ-YKV-P-IGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 356 ~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~r~~ 427 (429)
....+..++|||.|+|.|+|++||++|++++++.|+++|+++++++.+ ++. . ..+++..|.++.+++++|..
T Consensus 401 ~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~R~~ 475 (477)
T 1r9o_A 401 NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVPPFYQLCFIPIHH 475 (477)
T ss_dssp CBCCCTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBCCCCCEEEEECCC
T ss_pred CcCccccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecCCCeEEEEEEecc
Confidence 434457899999999999999999999999999999999999987653 222 3 45667777899999999964
No 10
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=4.1e-68 Score=521.78 Aligned_cols=395 Identities=18% Similarity=0.249 Sum_probs=295.7
Q ss_pred CCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhc-CccccCCCCcccccc
Q psy1301 26 DLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVK-ATDFDGRPNISRYND 104 (429)
Q Consensus 26 ~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~-~~~f~~r~~~~~~~~ 104 (429)
+.||||+++|++||++++.+ +++.++.+|+++|||||++++|+.++|+|+||+++++++.++ ...|.+++......
T Consensus 14 ~~~PGP~~~PliGn~~~~~~--~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~- 90 (485)
T 3nxu_A 14 LGIPGPTPLPFLGNILSYHK--GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG- 90 (485)
T ss_dssp HTCCCCCCBTTTBTGGGGGG--CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG-
T ss_pred CCCCCCCCcCeecCcHHhhc--ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc-
Confidence 45899999999999999987 899999999999999999999999999999999999999987 56787765443222
Q ss_pred ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-----------------------
Q psy1301 105 LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV----------------------- 160 (429)
Q Consensus 105 ~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~----------------------- 160 (429)
+.+ ..........|+ ++|+++.+.|+...+..+ ++.+.+++ .+++.+....
T Consensus 91 ~~~-~~l~~~~g~~w~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~ 165 (485)
T 3nxu_A 91 FMK-SAISIAEDEEWK-RLRSLLSPTFTSGKLKEM---VPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITST 165 (485)
T ss_dssp GGG-GSTTTCCHHHHH-HHHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHH
T ss_pred ccc-cCccccCCcHHH-HHHhhcChhcCHHHHHHH---HHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHH
Confidence 222 211112233488 889999998988888877 66666666 6666664322
Q ss_pred hcCCCccccc--HHHHHHhhhhhhcCc-c----chhhhHHHh---hhhccCC---hhHHHHH------------------
Q psy1301 161 YNNRDKAKMD--LNTALFSLEDIVGGH-T----AISNFIMKT---LGFLVNH---PNVQAKI------------------ 209 (429)
Q Consensus 161 ~~~~~~~~~~--~~~~~~~~~~~~~~~-~----~~~~~~p~l---~~~~~~~---~~~~~~~------------------ 209 (429)
.|+.+..... .+.+...+....... . .....+|++ ...++.. ++..+.+
T Consensus 166 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (485)
T 3nxu_A 166 SFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKH 245 (485)
T ss_dssp HHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 2333211100 002222222221100 0 011122221 1222211 1111111
Q ss_pred -HHHHHHHHHHhcC--------CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCCh
Q psy1301 210 -QKEVDAITLRMSG--------VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTL 279 (429)
Q Consensus 210 -~d~l~~ll~~~~~--------~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~ 279 (429)
.|+++.+++...+ .+++++..++.++++ |+|||+++++|++++|++||++|+||++||+++++.++.+++
T Consensus 246 ~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~ 325 (485)
T 3nxu_A 246 RVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTY 325 (485)
T ss_dssp CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCCH
T ss_pred cccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCH
Confidence 2567777764321 277888888887766 999999999999999999999999999999999998788999
Q ss_pred hhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCcc
Q psy1301 280 ADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIV 358 (429)
Q Consensus 280 ~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~ 358 (429)
+++.+||||+|||+|+||++| ++.++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++....
T Consensus 326 ~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~ 405 (485)
T 3nxu_A 326 DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI 405 (485)
T ss_dssp HHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHHTTS
T ss_pred HHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCccccC
Confidence 999999999999999999999 8889999999999999999999999999999999999999999999999997654444
Q ss_pred CCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcc-cccc-eeecCCceEEEEEeCCCC
Q psy1301 359 KPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKV-PIGD-LALPYNTFRFNFSPRNLR 428 (429)
Q Consensus 359 ~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~r~~~ 428 (429)
++..++|||.|+|.|+|++||++|++++++.|+++|+|+++++...++ ...+ +..+++++.+++++|...
T Consensus 406 ~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~ 477 (485)
T 3nxu_A 406 DPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGT 477 (485)
T ss_dssp CTTTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC---
T ss_pred CCCCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccCC
Confidence 567899999999999999999999999999999999999987654332 2223 344457999999999753
No 11
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=4.6e-68 Score=520.34 Aligned_cols=397 Identities=24% Similarity=0.395 Sum_probs=294.2
Q ss_pred ccCCCCCCCCCCCCeeccccccCCCCc--hHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCc
Q psy1301 22 ERISDLTPMPWALPIIGHLHLLGQYEV--PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNI 99 (429)
Q Consensus 22 ~~~~~~ppgP~~~P~lG~~~~~~~~~~--~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~ 99 (429)
+++.++||||+++|++||++++.. .. ++..+.+|+++|||||++++|+.++|+|+||+++++++.+++..|++++..
T Consensus 8 ~~~~~lpPgP~~~p~~G~~~~~~~-~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~ 86 (481)
T 3czh_A 8 RRPMGFPPGPPGLPFIGNIYSLAA-SSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCL 86 (481)
T ss_dssp ----CCCCCCCCBTTTBHHHHHHH-CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCC
T ss_pred CCCCCCCCCCCCCcccccHhhcCc-ccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCc
Confidence 355678999999999999988765 22 899999999999999999999999999999999999999887788877654
Q ss_pred cccccccCCCCccc-ccchHHHHHHHHHHHhhhhhhhH--HHHhhhhhcccchh-hHHHHHH------------------
Q psy1301 100 SRYNDLFSGNRENC-KKLSQMSKAIRAFVMENLMNDRI--VKYERNERNNNDEE-DYVDSLL------------------ 157 (429)
Q Consensus 100 ~~~~~~~~~~~~~~-~~~~~w~~~lR~~~~~~~~~~~~--~~~~~~~~~~~~~~-~l~~~l~------------------ 157 (429)
..+..+.++.+... .....|+ ++|+++.+.|....+ ..+ ++.+.+++ .+++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~g~~w~-~~R~~~~~~f~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~ 162 (481)
T 3czh_A 87 PLFMKMTKMGGLLNSRYGRGWV-DHRRLAVNSFRYFGYGQKSF---ESKILEETKFFNDAIETYKGRPFDFKQLITNAVS 162 (481)
T ss_dssp HHHHHHHTTCSSTTCCSSHHHH-HHHHHHHHHHHHTTTTSTTH---HHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHH
T ss_pred HHHHhhcCCCCeEeCCCChHHH-HHHHHHHHHHHHhcCChHHH---HHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHH
Confidence 33332322221011 1233488 788888877654322 222 22222222 2222221
Q ss_pred ---HHHhcCCC----cccccHHHHHHhhhhhhc--Cccc--hhhhHHHhhhhccCC--hh---------------HHHHH
Q psy1301 158 ---ERVYNNRD----KAKMDLNTALFSLEDIVG--GHTA--ISNFIMKTLGFLVNH--PN---------------VQAKI 209 (429)
Q Consensus 158 ---~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~--~~~~~p~l~~~~~~~--~~---------------~~~~~ 209 (429)
....++.+ +.++. .+.+.+..+.. .... +...+|++ .+++.. ++ ++++.
T Consensus 163 ~vi~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~ 239 (481)
T 3czh_A 163 NITNLIIFGERFTYEDTDFQ--HMIELFSENVELAASASVFLYNAFPWI-GILPFGKHQQLFRNAAVVYDFLSRLIEKAS 239 (481)
T ss_dssp HHHHHHHHSSCCCTTCHHHH--HHHHHHHHHHHHTTSHHHHHHHHCGGG-GGCSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCHHHH--HHHHHHHHHHhhhccchhHHhhhhHHH-HhCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11234432 22222 34333333321 1111 33445655 555422 11 11111
Q ss_pred --------HHHHHHHHHHhc--------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhc
Q psy1301 210 --------QKEVDAITLRMS--------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITL 272 (429)
Q Consensus 210 --------~d~l~~ll~~~~--------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~ 272 (429)
.|+++.+++... ..+++++..++.++++ |+|||+++++|++++|++||++|+||++||++++|
T Consensus 240 ~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~ 319 (481)
T 3czh_A 240 VNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319 (481)
T ss_dssp TTCCTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTC
T ss_pred HhcCCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcC
Confidence 256777775421 1278888888888866 99999999999999999999999999999999998
Q ss_pred cCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCC
Q psy1301 273 ISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERF 350 (429)
Q Consensus 273 ~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf 350 (429)
.++.++++++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||
T Consensus 320 ~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~ 399 (481)
T 3czh_A 320 PNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERF 399 (481)
T ss_dssp SSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGG
T ss_pred CCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCce
Confidence 7778999999999999999999999999 885 89999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcc-cccceeecCCceEEEEEeCC
Q psy1301 351 INADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKV-PIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 351 l~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~ 426 (429)
+++++....+..++|||.|+|.|+|++||++|++++++.|+++|+++++++..++. ...+++..|.++.++++||.
T Consensus 400 l~~~~~~~~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 476 (481)
T 3czh_A 400 LDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERRH 476 (481)
T ss_dssp BCTTSCBCCCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCCCCCBEEEECC
T ss_pred eCCCCCCcCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCCceEEEEEecc
Confidence 97654434567899999999999999999999999999999999999876554333 34577788999999999985
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-67 Score=518.36 Aligned_cols=395 Identities=28% Similarity=0.494 Sum_probs=293.3
Q ss_pred cCCCCC--CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc
Q psy1301 23 RISDLT--PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS 100 (429)
Q Consensus 23 ~~~~~p--pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~ 100 (429)
+..++| |||+++|++||++++.. +++..+.+|+++|||||++++|+.++|+|+||+++++++.+++..|++++...
T Consensus 11 ~~~~lp~~PgP~~~p~~G~~~~~~~--~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~ 88 (495)
T 2hi4_A 11 VPKGLKSPPEPWGWPLLGHVLTLGK--NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY 88 (495)
T ss_dssp CCTTCBCCCCCCCBTTTBTHHHHTT--CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH
T ss_pred CCCCCCCCCCCCCCcceeeHHhcCc--cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH
Confidence 344555 99999999999998876 89999999999999999999999999999999999999998777888776554
Q ss_pred ccccccCCCCcccc--cchHHHHHHHHHHHhhhhhhhH------H---HHhhhhhcccchh-hHHHHHHH----------
Q psy1301 101 RYNDLFSGNRENCK--KLSQMSKAIRAFVMENLMNDRI------V---KYERNERNNNDEE-DYVDSLLE---------- 158 (429)
Q Consensus 101 ~~~~~~~~~~~~~~--~~~~w~~~lR~~~~~~~~~~~~------~---~~~~~~~~~~~~~-~l~~~l~~---------- 158 (429)
.+..+.++...... ....|+ ++|+++.+.|..... . .+ ++.+.+++ ++++.+..
T Consensus 89 ~~~~~~~~~~l~~~~~~g~~w~-~~Rr~~~~~f~~~s~~~~~~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~~~~d~ 164 (495)
T 2hi4_A 89 TSTLITDGQSLTFSTDSGPVWA-ARRRLAQNALNTFSIASDPASSSSCYL---EEHVSKEAKALISRLQELMAGPGHFDP 164 (495)
T ss_dssp HHHTSTTSCCTTTSSCCSHHHH-HHHHHHHHHHHHTTTSBCSSCSSCBHH---HHHHHHHHHHHHHHHHHHHHTTSCBCH
T ss_pred HHHHhcCCCCEEEcCCCChHHH-HHHHHHHHHHHHhccCcccccchhhhH---HHHHHHHHHHHHHHHHHhccCCCccch
Confidence 33333233211112 133488 788888776432110 0 22 22222222 33333322
Q ss_pred -------------HHhcCC----CcccccHHHHHHhhhhhhc--CccchhhhHHHhhhhccCC--hh-------------
Q psy1301 159 -------------RVYNNR----DKAKMDLNTALFSLEDIVG--GHTAISNFIMKTLGFLVNH--PN------------- 204 (429)
Q Consensus 159 -------------~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~l~~~~~~~--~~------------- 204 (429)
...++. ++.++. .+......+.. .......++|++ .+++.. ++
T Consensus 165 ~~~~~~~~~dvi~~~~fG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~~~~~~~ 241 (495)
T 2hi4_A 165 YNQVVVSVANVIGAMCFGQHFPESSDEML--SLVKNTHEFVETASSGNPLDFFPIL-RYLPNPALQRFKAFNQRFLWFLQ 241 (495)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSCTTCHHHH--HHHTTTHHHHTTSSTTCGGGTCGGG-GGSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCHHHH--HHHHHHHHHHHhcccchHHHHhHHH-HhcCchHHHHHHHHHHHHHHHHH
Confidence 112333 122222 34444444321 111234456655 555431 00
Q ss_pred --HHHHH--------HHHHHHHHHHhc--------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHH
Q psy1301 205 --VQAKI--------QKEVDAITLRMS--------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQK 265 (429)
Q Consensus 205 --~~~~~--------~d~l~~ll~~~~--------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~ 265 (429)
++++. .|+++.+++... ..+++++..++.++++ |+|||+++++|++++|++||++|+||++
T Consensus 242 ~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~ 321 (495)
T 2hi4_A 242 KTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQK 321 (495)
T ss_dssp HHHHHHHHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 11111 257777775321 1267888888888766 9999999999999999999999999999
Q ss_pred HHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCC
Q psy1301 266 EVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPE 343 (429)
Q Consensus 266 Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~ 343 (429)
||++++|.++.++.+++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||+
T Consensus 322 Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~ 401 (495)
T 2hi4_A 322 ELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPS 401 (495)
T ss_dssp HHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSSTT
T ss_pred HHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCCcC
Confidence 99999987778999999999999999999999999 886 8999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCc---cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcc-cccceeecCCce-
Q psy1301 344 NFQPERFINADGRI---VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKV-PIGDLALPYNTF- 418 (429)
Q Consensus 344 ~F~PeRfl~~~~~~---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~- 418 (429)
+|+||||+++++.. ..+..++|||.|+|.|+|++||++|++++++.|+++|++++.++..+++ ...+++..|.++
T Consensus 402 ~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~ 481 (495)
T 2hi4_A 402 EFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHARCE 481 (495)
T ss_dssp SCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCCCCC
T ss_pred ccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCCCcc
Confidence 99999999765331 2346899999999999999999999999999999999999987654444 345777778888
Q ss_pred EEEEEeCCC
Q psy1301 419 RFNFSPRNL 427 (429)
Q Consensus 419 ~~~~~~r~~ 427 (429)
+++++ |..
T Consensus 482 ~v~~~-R~~ 489 (495)
T 2hi4_A 482 HVQAR-RFS 489 (495)
T ss_dssp CBEEE-CCC
T ss_pred eEEEE-Ecc
Confidence 99998 864
No 13
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.7e-66 Score=512.55 Aligned_cols=394 Identities=19% Similarity=0.252 Sum_probs=278.6
Q ss_pred cccCCCCCCCCCCCCeeccccccCCC--CchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCC
Q psy1301 21 GERISDLTPMPWALPIIGHLHLLGQY--EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPN 98 (429)
Q Consensus 21 ~~~~~~~ppgP~~~P~lG~~~~~~~~--~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~ 98 (429)
..++.+.||||+++|++||++++.+. ..++..+.+|+++|||||++++|+.++|+|+||++++++++++ .|++++.
T Consensus 40 ~~~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~ 117 (503)
T 3s79_A 40 NYEGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFG 117 (503)
T ss_dssp -----CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCC
T ss_pred HHhccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcch
Confidence 34566899999999999999887541 1345688999999999999999999999999999999999754 6777654
Q ss_pred cccccccc--CCCCccccc-chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-----------------hHHH---H
Q psy1301 99 ISRYNDLF--SGNRENCKK-LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-----------------DYVD---S 155 (429)
Q Consensus 99 ~~~~~~~~--~~~~~~~~~-~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~l~~---~ 155 (429)
........ .+.+..... ...|+ ++|+++.+.|+...+..+ .+.+.+++ ++.+ .
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~g~~w~-~~Rr~~~~~f~~~~l~~~---~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~ 193 (503)
T 3s79_A 118 SKLGLQCIGMHEKGIIFNNNPELWK-TTRPFFMKALSGPGLVRM---VTVCAESLKTHLDRLEEVTNESGYVDVLTLLRR 193 (503)
T ss_dssp CHHHHHHHTCTTSSSTTCCCHHHHH-HHHHHHHHHTSTHHHHHH---HHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHH
T ss_pred hhhhhhhhccCCCceeeCCCccHHH-HHHHhhhHhhChHHHHHH---HHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHH
Confidence 33221211 122111112 23388 789888888776666555 21111111 2222 1
Q ss_pred HH----HHHhcCCCccccc-HHHHHHhhhhhhcCccchhhhHHHhhhhccCC-hhHHHHH--------------------
Q psy1301 156 LL----ERVYNNRDKAKMD-LNTALFSLEDIVGGHTAISNFIMKTLGFLVNH-PNVQAKI-------------------- 209 (429)
Q Consensus 156 l~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~-~~~~~~~-------------------- 209 (429)
+. ....++.+...-. ...+...+..+..... ....+..+ .++... .+..+.+
T Consensus 194 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 271 (503)
T 3s79_A 194 VMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLI-KPDIFFKI-SWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEK 271 (503)
T ss_dssp HHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHTT-CCHHHHHS-GGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHcCcccCchhHHHHHHHHHHHHHHHhc-CcHHHhhc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 11 1224554321100 0012222222211000 01111111 111100 0111111
Q ss_pred ----HHHHHHHHHHhcC--CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhh
Q psy1301 210 ----QKEVDAITLRMSG--VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADR 282 (429)
Q Consensus 210 ----~d~l~~ll~~~~~--~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~ 282 (429)
.|+++.+++..++ .+++++...+.++++ |+|||+++++|++++|++||++|+|+++||++++| ++.++.+|+
T Consensus 272 ~~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~~~~~ 350 (503)
T 3s79_A 272 LEECMDFATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDI 350 (503)
T ss_dssp TTTTCCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCCHHHH
T ss_pred cchHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCCHHHH
Confidence 1567777755432 378888888887766 99999999999999999999999999999999998 678999999
Q ss_pred cCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCC
Q psy1301 283 KQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPE 361 (429)
Q Consensus 283 ~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~ 361 (429)
++|||++|||+|+||++| ++...|.+.+|++++||.|||||.|+++.+++||| ++|+||++|+||||++.. ...
T Consensus 351 ~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~----~~~ 425 (503)
T 3s79_A 351 QKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNV----PYR 425 (503)
T ss_dssp TTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCC----CTT
T ss_pred hcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCC----Ccc
Confidence 999999999999999999 88888999999999999999999999999999999 999999999999999752 345
Q ss_pred CccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCc-c-cccceeecCCc----eEEEEEeCCCC
Q psy1301 362 HFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYK-V-PIGDLALPYNT----FRFNFSPRNLR 428 (429)
Q Consensus 362 ~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~-~-~~~~~~~~~~~----~~~~~~~r~~~ 428 (429)
.++|||+|+|.|+|++||.+|++++++.|+++|+|++++|...+ . ...+++..|.+ +++++++|...
T Consensus 426 ~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~~ 498 (503)
T 3s79_A 426 YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSD 498 (503)
T ss_dssp TCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC--
T ss_pred cccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCch
Confidence 89999999999999999999999999999999999999876432 2 33456665543 89999999753
No 14
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=2.8e-66 Score=502.64 Aligned_cols=393 Identities=17% Similarity=0.240 Sum_probs=284.9
Q ss_pred ccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccc
Q psy1301 22 ERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISR 101 (429)
Q Consensus 22 ~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~ 101 (429)
.++.+.||||+++|++||++++.. +++ ++.+++++|||||+++++|.++|+|+||+++++++.+++..|+.+.. ..
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~~~--~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~ 83 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNFLN--DGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-LS 83 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHHHH--CTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-HH
T ss_pred CCCCCCCCCCCCCCccccHHHHhc--CcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-HH
Confidence 445678999999999999988876 777 88899999999999999888899999999999999987656763211 11
Q ss_pred cccccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH-------------------Hh
Q psy1301 102 YNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER-------------------VY 161 (429)
Q Consensus 102 ~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~-------------------~~ 161 (429)
...+++...........|+ ++|+.+.+.|+...+..+ .+.+.+++ ++++.+... +.
T Consensus 84 ~~~~~g~~~l~~~~g~~~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~~~ 159 (444)
T 2ve3_A 84 TRILLGPNALATQMGEIHR-SRRKILYQAFLPRTLDSY---LPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLF 159 (444)
T ss_dssp HHHHHCTTSGGGCCHHHHH-HHHHHHHGGGCHHHHHTT---HHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCccccccCCchHHH-HHHHHHHhhcCHHHHHHH---HHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHH
Confidence 2223332211122233487 789999888887777776 55555555 555554321 12
Q ss_pred cC-CCcccccHHHHHHhhhhhhcCccchhhhHHHh--hhhccCChh--------HHHHH------HHHHHHHHHHhcC--
Q psy1301 162 NN-RDKAKMDLNTALFSLEDIVGGHTAISNFIMKT--LGFLVNHPN--------VQAKI------QKEVDAITLRMSG-- 222 (429)
Q Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l--~~~~~~~~~--------~~~~~------~d~l~~ll~~~~~-- 222 (429)
+| .+..+ . ++...+..+..+...+...+|.. .+......+ ++++. .|+++.+++...+
T Consensus 160 fG~~~~~~-~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~~ 236 (444)
T 2ve3_A 160 MGEKVSQN-P--QLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQPPSEEDALGILLAARDDNN 236 (444)
T ss_dssp TCHHHHSC-T--THHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHCBCTTS
T ss_pred cCCCcccH-H--HHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHhccccCC
Confidence 33 10000 1 11111111100000000001110 000000000 11111 2466666654321
Q ss_pred --CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCc
Q psy1301 223 --VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMI 299 (429)
Q Consensus 223 --~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~ 299 (429)
.+++++..++.++++ |+|||+++++|++++|++||++|+||++|++.+++.. .++.+++.+||||+|||+|+||++
T Consensus 237 ~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl~ 315 (444)
T 2ve3_A 237 QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRLI 315 (444)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhcC
Confidence 278888888888766 9999999999999999999999999999999998754 789999999999999999999999
Q ss_pred C-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCC-CccCCCCccccCCCCCCCccHH
Q psy1301 300 A-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADG-RIVKPEHFLPFSGGRRSCMGNK 377 (429)
Q Consensus 300 ~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~-~~~~~~~~~pFg~G~r~C~G~~ 377 (429)
| ++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++.. ....++.++|||+|+|.|+|++
T Consensus 316 p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G~r~C~G~~ 395 (444)
T 2ve3_A 316 PPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKE 395 (444)
T ss_dssp CSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCGGGCCSCHH
T ss_pred CCccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCCCccCccHH
Confidence 9 8888899999999999999999999999999999999999999999999997543 2234567999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 378 MVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 378 ~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
||.+|++++++.|+++|++++.++.++++....+..++.+++|++++|.
T Consensus 396 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~ 444 (444)
T 2ve3_A 396 FARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSLM 444 (444)
T ss_dssp HHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC-
T ss_pred HHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeCC
Confidence 9999999999999999999998765544423344556779999999883
No 15
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=1.5e-65 Score=504.92 Aligned_cols=388 Identities=22% Similarity=0.351 Sum_probs=284.3
Q ss_pred ccccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCc
Q psy1301 20 IGERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNI 99 (429)
Q Consensus 20 ~~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~ 99 (429)
..++..++||||++ ++++.. ++++..+.+|+++|||||++++|+.++|+|+||+++++++.+++..|++++..
T Consensus 23 ~~~~~~~lPPGP~~------l~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~ 95 (496)
T 3qz1_A 23 WKLRNLHLPPLVPG------FLHLLQ-PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQI 95 (496)
T ss_dssp ------CCCCBCSC------SCTTSS-SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCC
T ss_pred hhccCCCCCcCCcc------ccccCC-CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence 34566789999987 555533 58999999999999999999999999999999999999999988889888766
Q ss_pred cccccccCCC-Cccccc-chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHH-----------------H
Q psy1301 100 SRYNDLFSGN-RENCKK-LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLE-----------------R 159 (429)
Q Consensus 100 ~~~~~~~~~~-~~~~~~-~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~-----------------~ 159 (429)
........+. ...... ...|+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+.. .
T Consensus 96 ~~~~~~~~~~~~l~~~~~g~~w~-~~Rr~~~~~f~~~~~~~~---~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~d 171 (496)
T 3qz1_A 96 PSYKLVSQRCQDISLGDYSLLWK-AHKKLTRSALLLGTRSSM---EPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCS 171 (496)
T ss_dssp TTTTTSCTTCCCSSSSCCSHHHH-HHHHHHHHHHHC--CCCH---HHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHH
T ss_pred chHHHhcCCCCceEECCCCHHHH-HHHHHHHHHHhhccHhhH---HHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHH
Confidence 5544433332 212223 33488 789988887764443344 34444444 44444432 1
Q ss_pred H----hcCCC-cccccHHHHHHhhhhhhcCc----cchhhhHHHhhhhccCC-----hhHHHHHH---------------
Q psy1301 160 V----YNNRD-KAKMDLNTALFSLEDIVGGH----TAISNFIMKTLGFLVNH-----PNVQAKIQ--------------- 210 (429)
Q Consensus 160 ~----~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~l~~~~~~~-----~~~~~~~~--------------- 210 (429)
+ .|+.. +.... .+.+.+..+.... ..+..++|++ ++++.. .+..+.+.
T Consensus 172 vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (496)
T 3qz1_A 172 IICYLTFGNKEDTLVH--AFHDCVQDLMKTWDHWSIQILDMVPFL-RFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMV 248 (496)
T ss_dssp HTTTTSTTCCCHHHHH--HHHHHHHTTTTTTSSHHHHHHHHCGGG-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHhcCCCCChHHH--HHHHHHHHHHHHhccchhHHHHhHHHH-HhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 1 23431 22222 4444444442211 1234455654 555532 11111222
Q ss_pred -----HHHHHHHHHhc---------CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcc--
Q psy1301 211 -----KEVDAITLRMS---------GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLI-- 273 (429)
Q Consensus 211 -----d~l~~ll~~~~---------~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~-- 273 (429)
|+++.+++... ..+++++..++.++++ |+|||+++++|++++|++||++|+||++||+++++.
T Consensus 249 ~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~ 328 (496)
T 3qz1_A 249 AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGA 328 (496)
T ss_dssp SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSS
T ss_pred CCCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCc
Confidence 34455553321 1267788888887766 999999999999999999999999999999999985
Q ss_pred --CCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCC
Q psy1301 274 --SRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPER 349 (429)
Q Consensus 274 --~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeR 349 (429)
++.+ .+++++|||++|||+|+||++| ++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+|||
T Consensus 329 ~~~~~~-~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR 407 (496)
T 3qz1_A 329 SCSRVT-YKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDR 407 (496)
T ss_dssp SSSCCS-TTGGGSCHHHHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCC
T ss_pred ccCCCC-hhhhhcCcHHHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCccc
Confidence 4566 9999999999999999999999 887 8999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC-CCcc-cc--cceeecCCceEEEEEeC
Q psy1301 350 FINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ-QYKV-PI--GDLALPYNTFRFNFSPR 425 (429)
Q Consensus 350 fl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~-~~~~-~~--~~~~~~~~~~~~~~~~r 425 (429)
|++++ ....++|||.|+|.|+|++||.+|++++++.|+++|+++++++. .+++ .. .+++..|+++.+++++|
T Consensus 408 ~l~~~----~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R 483 (496)
T 3qz1_A 408 FLEPG----ANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQPFQVRLQPR 483 (496)
T ss_dssp CC-------CCCCCCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCCCCCCCCCCC
T ss_pred ccCCC----CCcCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCCceEEEEEEe
Confidence 99754 12389999999999999999999999999999999999998543 2333 22 47788888999999999
Q ss_pred C
Q psy1301 426 N 426 (429)
Q Consensus 426 ~ 426 (429)
+
T Consensus 484 ~ 484 (496)
T 3qz1_A 484 G 484 (496)
T ss_dssp -
T ss_pred c
Confidence 6
No 16
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=2e-66 Score=506.41 Aligned_cols=391 Identities=14% Similarity=0.191 Sum_probs=278.5
Q ss_pred ccCCCCCCC-CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc
Q psy1301 22 ERISDLTPM-PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS 100 (429)
Q Consensus 22 ~~~~~~ppg-P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~ 100 (429)
.+..++||| |+++|++||++++.+ +++.++.+|+++|||||++++++.++|||+|++++++++.++...|..++.+.
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~--~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGK--SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHH--CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhcc--CHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 345678999 899999999999987 99999999999999999999999999999999999999998766665443222
Q ss_pred cc-ccccCCCCcccc-cchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-------------hHHHHHHHH------
Q psy1301 101 RY-NDLFSGNRENCK-KLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-------------DYVDSLLER------ 159 (429)
Q Consensus 101 ~~-~~~~~~~~~~~~-~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~l~~~l~~~------ 159 (429)
.. ..+++.. .... ....|+ ++|+++.+.|....+..+ .+.+.+++ ++.+.+...
T Consensus 85 ~~~~~~~g~g-~~~~~~g~~w~-~~Rr~~~~~f~~~~l~~~---~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~ 159 (461)
T 3i3k_A 85 RLTTPVFGKG-VAYDVPNPVFL-EQKKMLKSGLNIAHFKQH---VSIIEKETKEYFESWGESGEKNVFEALSELIILTAS 159 (461)
T ss_dssp HHHHHHHCTT-SGGGSCHHHHH-HHHHHHHHHSSHHHHHHH---HHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHH
T ss_pred HhhhhhcCCe-eeeCCCcHHHH-HHHHHHhhhhCHHHHHHH---HHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHH
Confidence 21 2223321 1111 123487 788888887776666655 22111111 222222211
Q ss_pred -HhcCCCccc-ccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC-----hhHHHHHH------------------HHHH
Q psy1301 160 -VYNNRDKAK-MDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH-----PNVQAKIQ------------------KEVD 214 (429)
Q Consensus 160 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~-----~~~~~~~~------------------d~l~ 214 (429)
+.++.+... .. ..+.+.+..+..+.......+|. +++.. .+..+.+. |+++
T Consensus 160 ~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~l~ 235 (461)
T 3i3k_A 160 HCLHGKEIRSQLN-EKVAQLYADLDGGFSHAAWLLPG---WLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQ 235 (461)
T ss_dssp HHHTCHHHHHTCC-HHHHHHHHHHHTTSSHHHHHSCT---TSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSHHH
T ss_pred HHHccHhhhhHHH-HHHHHHHHHHHhccccchhhccc---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 123321110 01 12222233332222211222221 11111 11122222 3455
Q ss_pred HHHHHhcC----CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccC-CCCChhhhcCChhH
Q psy1301 215 AITLRMSG----VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLIS-RDVTLADRKQMPYT 288 (429)
Q Consensus 215 ~ll~~~~~----~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~~~~~lpyl 288 (429)
.+++...+ .+++++...+.++++ |+|||+++++|++++|++||++|+|+++||++++|.+ ..++.+++++|||+
T Consensus 236 ~ll~~~~~~~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l 315 (461)
T 3i3k_A 236 TLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLL 315 (461)
T ss_dssp HHHTCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHH
T ss_pred HHHHhhhccCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhcChHH
Confidence 55543211 277888888888766 9999999999999999999999999999999999854 35699999999999
Q ss_pred HHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccC
Q psy1301 289 EATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFS 367 (429)
Q Consensus 289 ~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg 367 (429)
+|||+|+||++| ++.++|.+.+|++++||.|||||.|+++.+++|+||++|+||++|+||||++.......+..++|||
T Consensus 316 ~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg 395 (461)
T 3i3k_A 316 DRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFG 395 (461)
T ss_dssp HHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSSCTTC
T ss_pred HHHHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcceeCCC
Confidence 999999999999 8779999999999999999999999999999999999999999999999998654333567899999
Q ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEe
Q psy1301 368 GGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 368 ~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
+|+|.|+|++||.+|++++++.|+++|+|++++|..+..........|.+ ++.+..
T Consensus 396 ~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~ 451 (461)
T 3i3k_A 396 AGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPEN-PVIRYK 451 (461)
T ss_dssp CGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSS-CEEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCC-ceEEee
Confidence 99999999999999999999999999999999886544433333444443 344433
No 17
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=5.1e-65 Score=500.07 Aligned_cols=398 Identities=16% Similarity=0.189 Sum_probs=284.1
Q ss_pred cccCCCCCCCCCCCCeeccccccCC---CCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 21 GERISDLTPMPWALPIIGHLHLLGQ---YEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 21 ~~~~~~~ppgP~~~P~lG~~~~~~~---~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
..++.+.+|||+++|+. |++++.. ..+++..+.+|+++|||||++++|+.++|+|+||+++++++.+++ .|++++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence 45667789999988876 7665421 147889999999999999999999999999999999999998765 787776
Q ss_pred Ccccc---cccc-CCCCcccccchHHHHHHHHHHHhh-hhhhhHHHHhhhhhcccchh-hHHHHHHHH------------
Q psy1301 98 NISRY---NDLF-SGNRENCKKLSQMSKAIRAFVMEN-LMNDRIVKYERNERNNNDEE-DYVDSLLER------------ 159 (429)
Q Consensus 98 ~~~~~---~~~~-~~~~~~~~~~~~w~~~lR~~~~~~-~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~------------ 159 (429)
..... .... .+..........|+ ++|+.+.+. |+...+..+ .+.+.+++ ++++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~-~~Rr~l~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd 157 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKKSAAWK-KDRVALNQEVMAPEATKNF---LPLLDAVSRDFVSVLHRRIKKAGSGNYSGD 157 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCCHHHHH-HHHHHHHHHHTSHHHHTTH---HHHHHHHHHHHHHHHHHHHHHHTSSSEEEC
T ss_pred CCcHHHHHHHHccccCCCccCCcHHHH-HHHHhcCcccCCchHHHHh---hhHHHHHHHHHHHHHHHHhcccccCCCCcc
Confidence 44321 1111 12211112233488 788888875 666666665 44444444 444444331
Q ss_pred ---------------HhcCCCc----cccc--HHHHHHhhhhhhcCccchhhhHH-HhhhhccCC--hh-------HHHH
Q psy1301 160 ---------------VYNNRDK----AKMD--LNTALFSLEDIVGGHTAISNFIM-KTLGFLVNH--PN-------VQAK 208 (429)
Q Consensus 160 ---------------~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~--~~-------~~~~ 208 (429)
..|+.+. .... ...+.+.+..+...... ...+| ++..+++.. ++ +.+.
T Consensus 158 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~ 236 (487)
T 3n9y_A 158 ISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVP-MLNLPPDLFRLFRTKTWKDHVAAWDVIFSK 236 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGG-GTTSCHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHH-HHhcCHHHHhhcccHHHHHHHHHHHHHHHH
Confidence 1233221 0000 11333333333211111 11111 121222111 00 1111
Q ss_pred HH---------------------HHHHHHHHHhcCCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHH
Q psy1301 209 IQ---------------------KEVDAITLRMSGVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKE 266 (429)
Q Consensus 209 ~~---------------------d~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~E 266 (429)
+. |+++.+++. .+.+++++..++.++++ |+|||+++++|++++|++||++|+||++|
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E 315 (487)
T 3n9y_A 237 ADIYTQNFYWELRQKGSVHHDYRGILYRLLGD-SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAE 315 (487)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcccchHHHHHHHHhc-CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 11 233333321 12378888888888876 99999999999999999999999999999
Q ss_pred HHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCC
Q psy1301 267 VDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENF 345 (429)
Q Consensus 267 i~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F 345 (429)
|+++++.++.++.+++++||||+|||+|+||++| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|
T Consensus 316 i~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F 395 (487)
T 3n9y_A 316 VLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENF 395 (487)
T ss_dssp HHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSC
T ss_pred HHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccC
Confidence 9999987666779999999999999999999999 778999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeC
Q psy1301 346 QPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPR 425 (429)
Q Consensus 346 ~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 425 (429)
+||||++.+.. ..+..++|||.|+|.|+|++||++|++++++.|+++|+|+++++.+++.....+..+..++.|++++|
T Consensus 396 ~PeR~l~~~~~-~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r 474 (487)
T 3n9y_A 396 DPTRWLSKDKN-ITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPF 474 (487)
T ss_dssp CGGGGTCSCTT-SSTTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEEEEC
T ss_pred ChhhcCCCCCC-CCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEEEEC
Confidence 99999985532 24578999999999999999999999999999999999999877554432223344456999999999
Q ss_pred CC
Q psy1301 426 NL 427 (429)
Q Consensus 426 ~~ 427 (429)
..
T Consensus 475 ~~ 476 (487)
T 3n9y_A 475 NQ 476 (487)
T ss_dssp --
T ss_pred Cc
Confidence 65
No 18
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=1.3e-65 Score=499.19 Aligned_cols=386 Identities=17% Similarity=0.223 Sum_probs=285.6
Q ss_pred CCCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcC-CeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc
Q psy1301 25 SDLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHG-SIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY 102 (429)
Q Consensus 25 ~~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG-~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~ 102 (429)
.++||||++ +|++||++++.+ +++.++.+|+++|| +||++++|+.++|||+||+++++++.+++..|++++.+...
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~--~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 79 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGK--SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM 79 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHH--CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG
T ss_pred CCCCCCCCCCcchhccHHHHcc--CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH
Confidence 468998655 999999999887 89999999999999 99999999999999999999999999988788877655444
Q ss_pred ccccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHH--------------HHHH-------HH
Q psy1301 103 NDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVD--------------SLLE-------RV 160 (429)
Q Consensus 103 ~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~--------------~l~~-------~~ 160 (429)
..+++..-........|+ ++|+++.+.|+...+..+ .+.+.+++ ++++ .+.. ..
T Consensus 80 ~~~~g~~~~~~~~~~~~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~ 155 (450)
T 3gw9_A 80 VPVFGEGVAYAAPYPRMR-EQLNFLAEELTIAKFQNF---VPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQC 155 (450)
T ss_dssp HHHHCTTSGGGSCHHHHH-HHHHHHHHTTSGGGCTTH---HHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcccCCCcHHHH-HHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHH
Confidence 444442211111233487 778888887776665554 22222222 2222 1111 11
Q ss_pred hcCCCccc-ccHHHHHHhhhhhhcCccchhhhHHHhhhhccCCh-----hHHHHH----------------------HHH
Q psy1301 161 YNNRDKAK-MDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHP-----NVQAKI----------------------QKE 212 (429)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~-----~~~~~~----------------------~d~ 212 (429)
.++.+... .....+.+.+..+.........++|++ .+++... +..+.+ .|+
T Consensus 156 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~ 234 (450)
T 3gw9_A 156 LFGEDLRKRLDARRFAQLLAKMESSLIPAAVFLPIL-LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDL 234 (450)
T ss_dssp HSCHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSH
T ss_pred HcCcchhhhhhhHHHHHHHHHHHhccccchhcccch-hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchH
Confidence 34432110 001133344443322222334455655 5554321 111111 245
Q ss_pred HHHHHHHhcC----CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHh--cCHHHHHHHHHHHHHhhccCCCCChhhh-cC
Q psy1301 213 VDAITLRMSG----VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLV--NHPNVQAKIQKEVDAITLISRDVTLADR-KQ 284 (429)
Q Consensus 213 l~~ll~~~~~----~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~--~~P~~~~~l~~Ei~~~~~~~~~~~~~~~-~~ 284 (429)
++.+++...+ .+++++..++.++++ |+|||+++++|++++|+ +||++|+|+++|++++ .+.++.+++ ++
T Consensus 235 l~~ll~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~~~~~~ 311 (450)
T 3gw9_A 235 LSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNVMDE 311 (450)
T ss_dssp HHHHHHCBCTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHHHHHHH
T ss_pred HHHHHHhhccCCCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChHHHHHh
Confidence 5566654321 277888888877766 99999999999999999 9999999999999998 456899999 99
Q ss_pred ChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCc
Q psy1301 285 MPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHF 363 (429)
Q Consensus 285 lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~ 363 (429)
|||++|||+|+||++| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||+.+ .+..+
T Consensus 312 lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~------~~~~~ 385 (450)
T 3gw9_A 312 MPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEK------VEGAF 385 (450)
T ss_dssp CHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCS------STTCC
T ss_pred cHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcC------CCCce
Confidence 9999999999999999 8888999999999999999999999999999999999999999999999321 35689
Q ss_pred cccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecC--CceEEEEEeCC
Q psy1301 364 LPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPY--NTFRFNFSPRN 426 (429)
Q Consensus 364 ~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~ 426 (429)
+|||.|+|.|+|++||.+|++++++.|+++|+|+++++...+....+++..| .++.|++++|+
T Consensus 386 ~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~ 450 (450)
T 3gw9_A 386 IGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK 450 (450)
T ss_dssp CTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred eCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence 9999999999999999999999999999999999986654333222333433 59999999985
No 19
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=1.6e-65 Score=498.88 Aligned_cols=393 Identities=14% Similarity=0.160 Sum_probs=271.4
Q ss_pred CCCCC-CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccccc
Q psy1301 26 DLTPM-PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYND 104 (429)
Q Consensus 26 ~~ppg-P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~ 104 (429)
++||| |+++|++||++++.. +++.++.+|+++|||||++++++.+++||+||+++++++.+++..|+.++.+.....
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~--~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~ 81 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRT--DPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTP 81 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTT--CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHH
T ss_pred CCCCCCCCCCCCccCHHHHhh--ChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHh
Confidence 67897 889999999999876 899999999999999999999999999999999999999887667877654432222
Q ss_pred ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-------------hHHHHHH---HH----HhcCC
Q psy1301 105 LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-------------DYVDSLL---ER----VYNNR 164 (429)
Q Consensus 105 ~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~l~~~l~---~~----~~~~~ 164 (429)
+++.. .......|+ ++|+.+.+.|+...+..+ .+.+.+++ ++.+.+. .. ..+|.
T Consensus 82 ~~g~~--~~~~~~~~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~ 155 (455)
T 2cib_A 82 IFGEG--VVFDASPER-RKEMLHNAALRGEQMKGH---AATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGK 155 (455)
T ss_dssp HHC-----------------------CCHHHHHHH---HHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred hcCCc--cccCcHHHH-HHHhhhccccCHHHHHHH---HHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCC
Confidence 23211 112233487 788888887777666665 22222222 2222221 11 23332
Q ss_pred CcccccHHHHHHhhhhhhcCccchhhhHHHhh----hhc-cCChh--------HHHHH--------H-HHHHHHHHHhc-
Q psy1301 165 DKAKMDLNTALFSLEDIVGGHTAISNFIMKTL----GFL-VNHPN--------VQAKI--------Q-KEVDAITLRMS- 221 (429)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~-~~~~~--------~~~~~--------~-d~l~~ll~~~~- 221 (429)
+........+...+..+..+......++|++. +.. ....+ ++++. . |+++.+++...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~~~ 235 (455)
T 2cib_A 156 KFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAE 235 (455)
T ss_dssp HHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHCBCT
T ss_pred CcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHhhhh
Confidence 21100001233333333221111112222210 000 00000 11111 1 67888876532
Q ss_pred ---C-CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhh
Q psy1301 222 ---G-VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESI 296 (429)
Q Consensus 222 ---~-~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~Etl 296 (429)
. .+++++...+.++++ |+|||+++++|++++|++||++|+||++||+++++.++.++++++++|||++|||+|+|
T Consensus 236 ~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~l 315 (455)
T 2cib_A 236 TGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315 (455)
T ss_dssp TSSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHH
Confidence 1 477888888888766 99999999999999999999999999999999998767789999999999999999999
Q ss_pred cCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCc-cCCCCccccCCCCCCCc
Q psy1301 297 RMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRI-VKPEHFLPFSGGRRSCM 374 (429)
Q Consensus 297 Rl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-~~~~~~~pFg~G~r~C~ 374 (429)
|++| ++.++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||++++... .++..++|||.|+|.|+
T Consensus 316 Rl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G~r~C~ 395 (455)
T 2cib_A 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCV 395 (455)
T ss_dssp HHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCGGGCCT
T ss_pred hcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCCCCCCC
Confidence 9999 888999999999999999999999999999999999999999999999999754321 13568999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcceeeCCCCCCcc--cccceee-cCCceEEEEEeCCC
Q psy1301 375 GNKMVQLISFTTLASLFQSYDLKKLPGQQYKV--PIGDLAL-PYNTFRFNFSPRNL 427 (429)
Q Consensus 375 G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~r~~ 427 (429)
|++||.+|++++++.|+++|+++++.. ..++ ...+++. +..+++|++++|..
T Consensus 396 G~~lA~~e~~~~la~ll~~f~~~~~~~-~~~~~~~~~~~~~~p~~~~~v~~~~R~~ 450 (455)
T 2cib_A 396 GAAFAIMQIKAIFSVLLREYEFEMAQP-PESYRNDHSKMVVQLAQPAAVRYRRRTG 450 (455)
T ss_dssp THHHHHHHHHHHHHHHHHHEEEEESSC-GGGCCEECSSSSCEECSCCEEEEEEC--
T ss_pred cHHHHHHHHHHHHHHHHHheEEEeCCC-ccccccccccccccCCCCceEEEEECcc
Confidence 999999999999999999999998732 2222 1123333 44589999999864
No 20
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=3.2e-65 Score=498.58 Aligned_cols=390 Identities=18% Similarity=0.257 Sum_probs=270.7
Q ss_pred CCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCC-CCccccc
Q psy1301 25 SDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGR-PNISRYN 103 (429)
Q Consensus 25 ~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r-~~~~~~~ 103 (429)
...||||+++|++||++++.+ +|+.++.++++ |||||++++|+.++++|+||+++++++.++ .|..+ +.+..+.
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~--~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~ 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLAR--DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHH--CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-----------
T ss_pred CCCCCCCCCCCcccchHHhcc--CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH
Confidence 556889999999999999887 99999999987 999999999999999999999999999887 56333 3332233
Q ss_pred cccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHH------------H-------HHHhcC
Q psy1301 104 DLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSL------------L-------ERVYNN 163 (429)
Q Consensus 104 ~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l------------~-------~~~~~~ 163 (429)
.+.+...........|+ ++|+.+.+.|+...+..+ .+.+.+++ ++++.+ . ....++
T Consensus 97 ~~~g~~~l~~~dg~~h~-~~R~~l~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g 172 (467)
T 3dbg_A 97 GLLGKEGVATANGPLHR-RQRRTIQPAFRLDAIPAY---GPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLR 172 (467)
T ss_dssp --------------------CGGGHHHHSTTTSTTT---HHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSC
T ss_pred HhcCCCCcccCCcHHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhC
Confidence 33332211112223387 788888887776665554 22222222 222222 1 111344
Q ss_pred CCcccccHHHHHHhhhhhhcCccchhhhHHH-hhhhccCC-----hhHHHHHH------------------HHHHHHHHH
Q psy1301 164 RDKAKMDLNTALFSLEDIVGGHTAISNFIMK-TLGFLVNH-----PNVQAKIQ------------------KEVDAITLR 219 (429)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-l~~~~~~~-----~~~~~~~~------------------d~l~~ll~~ 219 (429)
.+........+...+..+..+.. ...++|+ +..+++.. .+..+.+. |+++.+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~dll~~ll~~ 251 (467)
T 3dbg_A 173 GQYMDERAERLCVALATVFRGMY-RRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLEA 251 (467)
T ss_dssp SSCCHHHHHHHHHHHHHHHHC-------------------------CCHHHHHHHHHHHHHHHTTCCSSCCSHHHHHTTC
T ss_pred CcccchhHHHHHHHHHHHHHHHH-HHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHhh
Confidence 33221001133333333321111 1112221 11222211 11111222 455655543
Q ss_pred hcC----CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHh
Q psy1301 220 MSG----VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILE 294 (429)
Q Consensus 220 ~~~----~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E 294 (429)
.++ .+++++..++.++++ |+|||+++++|++++|++||++|+||++|++++++. +.++.+++++|||++|||+|
T Consensus 252 ~~~~~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~l~yl~a~i~E 330 (467)
T 3dbg_A 252 KDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGNVIVE 330 (467)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTTCHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhhCHHHHHHHHH
Confidence 221 277888888888766 999999999999999999999999999999999975 67899999999999999999
Q ss_pred hhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCC
Q psy1301 295 SIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSC 373 (429)
Q Consensus 295 tlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C 373 (429)
+||++| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++......+..++|||+|+|.|
T Consensus 331 ~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~FG~G~r~C 410 (467)
T 3dbg_A 331 AMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSAGKRKC 410 (467)
T ss_dssp HHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSSCSSSSSC
T ss_pred HhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCCCCCCCCC
Confidence 999999 8889999999999999999999999999999999999999999999999997543334567899999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 374 MGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 374 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
+|++||.+|++++++.|+++|+++++++.+.+ +..++++.|++++++=..|.
T Consensus 411 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~p~~l~~~~~~~~ 462 (467)
T 3dbg_A 411 PSDHFSMAQLTLITAALATKYRFEQVAGSNDA-VRVGITLRPHDLLVRPVARH 462 (467)
T ss_dssp TTHHHHHHHHHHHHHHHHHHEEEEECTTCEEE-EEESSSEEEEECEEEEEECC
T ss_pred ccHHHHHHHHHHHHHHHHHhceeEeCCCCCCc-cceeeEecCCCCccchhhhh
Confidence 99999999999999999999999999876544 34577888888888776664
No 21
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=5.9e-64 Score=492.96 Aligned_cols=399 Identities=16% Similarity=0.243 Sum_probs=270.8
Q ss_pred ccccCCCCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcC-ccccCCC
Q psy1301 20 IGERISDLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKA-TDFDGRP 97 (429)
Q Consensus 20 ~~~~~~~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~-~~f~~r~ 97 (429)
.+++..+.||||++ +|++||++++.+ +++.++.+|+++||+||++++|+.++|||+||+++++++.++. ..|....
T Consensus 7 ~~~~~~~~pPgp~~~~P~iG~~~~~~~--~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~ 84 (491)
T 3dax_A 7 SRRRQTGEPPLENGLIPYLGCALQFGA--NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH 84 (491)
T ss_dssp CCCCCTTCCCEEEEEESCTTTTGGGTC--CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHH
T ss_pred hhccCCCCCCcCCCcccchhhHHHHhh--CHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHH
Confidence 33455678999988 899999999977 8999999999999999999999999999999999999998764 2332211
Q ss_pred CccccccccCCCCcc-cccchHHHHHHHHHHHhhhhhhhHHHHhhhh-----h------------cc--cchh-hHHHHH
Q psy1301 98 NISRYNDLFSGNREN-CKKLSQMSKAIRAFVMENLMNDRIVKYERNE-----R------------NN--NDEE-DYVDSL 156 (429)
Q Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~-----~------------~~--~~~~-~l~~~l 156 (429)
. ......++.. .. ......|+ ++|+.+.+.++...+..+.... . .. ...+ .++..+
T Consensus 85 ~-~~~~~~~g~~-~~~~~~g~~w~-~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3dax_A 85 F-ATSAKAFGHR-SIDPMDGNTTE-NINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp H-HHHHHHHTCC-CCCGGGTSBCC-CHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHH
T ss_pred H-HHHHHHcCCC-cccccchhHHH-HHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHH
Confidence 1 1111222221 11 11112266 4455444444444443331100 0 00 0111 222222
Q ss_pred HHH----HhcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC--h---hHHHHH---------------HHH
Q psy1301 157 LER----VYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH--P---NVQAKI---------------QKE 212 (429)
Q Consensus 157 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~--~---~~~~~~---------------~d~ 212 (429)
... +.++.+....+ .....+..+......+...+|++...++.. + +..+.+ .|+
T Consensus 162 i~~~~~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 239 (491)
T 3dax_A 162 MFEAGYLTIFGRDLTRRD--TQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISEL 239 (491)
T ss_dssp HHHHHHHHHHCBCSTTGG--GHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTSHHHHTTCBSCCHH
T ss_pred HHHHhHHHHcCccccccc--chhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHhhcccchhHH
Confidence 222 23554211111 011111111100111234556543333321 1 111111 366
Q ss_pred HHHHHHHhc---CCcHHHHHHHHHHH-hhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCC----------CCC
Q psy1301 213 VDAITLRMS---GVHKLKVIFSLEDI-VGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISR----------DVT 278 (429)
Q Consensus 213 l~~ll~~~~---~~~~~~i~~~~~~l-~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~----------~~~ 278 (429)
++.+++... ..+++++..++.++ ++|+|||+++++|++++|++||++|+||++||+++++.++ .++
T Consensus 240 l~~ll~~~~~~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~ 319 (491)
T 3dax_A 240 ISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLS 319 (491)
T ss_dssp HHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCC
T ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccC
Confidence 777664322 23677777555554 5599999999999999999999999999999999998543 369
Q ss_pred hhhhcCChhHHHHHHhhhcCcCCCCCccccCCCcee----cCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCC
Q psy1301 279 LADRKQMPYTEATILESIRMIASPIVPHVATQNSSI----GGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINAD 354 (429)
Q Consensus 279 ~~~~~~lpyl~a~i~EtlRl~~~~~~~R~~~~d~~l----~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 354 (429)
.+++++||||+|||+||||++|++.++|.+.+|+++ +||.|||||.|+++.+++|+||++|+||++|+||||++++
T Consensus 320 ~~~l~~lpyl~a~i~E~lRl~p~~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~ 399 (491)
T 3dax_A 320 QAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDEN 399 (491)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHEEECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTTBCTT
T ss_pred HHHHhcCHHHHHHHHHHHhcCCCccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCCHHHcCCccccCCC
Confidence 999999999999999999999965789999999999 7899999999999999999999999999999999999754
Q ss_pred CCc---------cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC--CCcc-c-ccce-eec-CCceE
Q psy1301 355 GRI---------VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ--QYKV-P-IGDL-ALP-YNTFR 419 (429)
Q Consensus 355 ~~~---------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~-~-~~~~-~~~-~~~~~ 419 (429)
+.. ..+..++|||+|+|+|+|++||++|++++++.||++|+|+++++. .+++ . ..++ +.+ +.++.
T Consensus 400 ~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 479 (491)
T 3dax_A 400 GKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIE 479 (491)
T ss_dssp SSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCE
T ss_pred ccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCce
Confidence 321 235689999999999999999999999999999999999998763 2333 2 1243 334 45777
Q ss_pred EEEEeC
Q psy1301 420 FNFSPR 425 (429)
Q Consensus 420 ~~~~~r 425 (429)
++++..
T Consensus 480 ~~~r~~ 485 (491)
T 3dax_A 480 FKYKFK 485 (491)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 777654
No 22
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=4.6e-63 Score=483.36 Aligned_cols=388 Identities=17% Similarity=0.257 Sum_probs=277.4
Q ss_pred CCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccc
Q psy1301 26 DLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDL 105 (429)
Q Consensus 26 ~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~ 105 (429)
+.||||+++|++||++++.. .+++..+.+|+++|||||++++++.++|+|+||+++++++.++ .|...+. .....+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~ 78 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNT-DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFV 78 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCS-SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHH
T ss_pred CCCCCCCCCCccccHHHHhc-ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHH
Confidence 46899999999999998864 5789999999999999999999999999999999999999653 4532121 111111
Q ss_pred --cCCCCcccc--cchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHH------------------H---
Q psy1301 106 --FSGNRENCK--KLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLE------------------R--- 159 (429)
Q Consensus 106 --~~~~~~~~~--~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~------------------~--- 159 (429)
..+...... ....|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.. .
T Consensus 79 ~~~~~~~l~~~~~~g~~w~-~~Rr~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~ 154 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWK-KAHNILLPSFSQQAMKGY---HAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIG 154 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHH-HHHHHHGGGGSTTTHHHH---HHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEcCCCchHHH-HHHHHhccccCHHHHHHH---HHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHH
Confidence 112211111 123488 789999888887777776 44444444 44443322 1
Q ss_pred -HhcCCCc-----ccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC--h---h------------HHHHH------H
Q psy1301 160 -VYNNRDK-----AKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH--P---N------------VQAKI------Q 210 (429)
Q Consensus 160 -~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~--~---~------------~~~~~------~ 210 (429)
..++.+. .+.. .+...+..............|++ .+++.. + + ++++. .
T Consensus 155 ~~~fG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 231 (470)
T 2ij2_A 155 LCGFNYRFNSFYRDQPH--PFITSMVRALDEAMNKLQRANPD-DPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD 231 (470)
T ss_dssp HHHHSCCCCGGGCSSCC--HHHHHHHHHHHHHHHTC---CTT-SGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred HHHcCCcccccccCCCC--HHHHHHHHHHHHHHHHHhhhhhH-hhccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCch
Confidence 1233321 1112 22222222210000000000000 111100 0 0 11111 2
Q ss_pred HHHHHHHHHhc-----CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcC
Q psy1301 211 KEVDAITLRMS-----GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQ 284 (429)
Q Consensus 211 d~l~~ll~~~~-----~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 284 (429)
|+++.+++..+ ..+++++..++.++++ |+|||+++++|++++|++||++|+||++|+++++|. +.++++++++
T Consensus 232 dll~~ll~~~~~~~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~-~~~~~~~~~~ 310 (470)
T 2ij2_A 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVD-PVPSYKQVKQ 310 (470)
T ss_dssp SHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCS-SSCCHHHHHT
T ss_pred hHHHHHHhccCcccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC-CCCCHHHHhC
Confidence 57777776432 1378888888888876 999999999999999999999999999999999885 4589999999
Q ss_pred ChhHHHHHHhhhcCcC-CCCCccccCCCceecC-EEeCCCCEEeechhhhccCCCCC-CCCCCCCCCCCCCCCCCccCCC
Q psy1301 285 MPYTEATILESIRMIA-SPIVPHVATQNSSIGG-FEVKKDTMIFLNNYDLNMSPELW-SEPENFQPERFINADGRIVKPE 361 (429)
Q Consensus 285 lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g-~~ipkGt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~ 361 (429)
|||++|||+|+||++| ++.++|.+.+|++++| |.|||||.|+++.+++||||++| +||++|+|||| +. .....+.
T Consensus 311 lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~~~~~~~ 388 (470)
T 2ij2_A 311 LKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-PSAIPQH 388 (470)
T ss_dssp CHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-GGGSCTT
T ss_pred CHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-CCcCCCc
Confidence 9999999999999999 8888999999999999 99999999999999999999999 99999999999 32 1122346
Q ss_pred CccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeCCCC
Q psy1301 362 HFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPRNLR 428 (429)
Q Consensus 362 ~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 428 (429)
.++|||.|+|.|+|++||++|++++++.|+++|+|+..++.+++ ...++++.|.++++++++|..+
T Consensus 389 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~p~~~~v~~~~R~~~ 454 (470)
T 2ij2_A 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD-IKETLTLKPEGFVVKAKSKKIP 454 (470)
T ss_dssp SCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCC-EEESSSEEETTCEEEEEECCCC
T ss_pred cccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccc-cccceEecCCCeEEEEEEccCC
Confidence 89999999999999999999999999999999999922222222 2345566677999999999765
No 23
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=1.1e-62 Score=484.69 Aligned_cols=401 Identities=13% Similarity=0.193 Sum_probs=269.2
Q ss_pred eccccCCCCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 19 AIGERISDLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 19 ~~~~~~~~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
...++..++||||++ +|++||++++.. +++.++.+|+++|||||++++|+.++|||+||+++++++.++...++.++
T Consensus 11 ~~~~~~~~~PPgp~~~~P~iG~~~~~~~--~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~ 88 (498)
T 3b6h_A 11 RRRTRRPGEPPLDLGSIPWLGYALDFGK--DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHA 88 (498)
T ss_dssp --CCCCTTCCCEECCSSTTTBTHHHHHH--CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCH
T ss_pred HHhccCCCCCCCCCCCCcchhhHHHhcc--CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchh
Confidence 444666789999988 899999999876 89999999999999999999999999999999999999987753233332
Q ss_pred Ccc-ccccccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhh------------h-----hcccchh-----hHHH
Q psy1301 98 NIS-RYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERN------------E-----RNNNDEE-----DYVD 154 (429)
Q Consensus 98 ~~~-~~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~-----~l~~ 154 (429)
... .....++.. ........|++.+ .+.+....+..+... . ....... +++-
T Consensus 89 ~~~~~~~~~~g~~-~~~~~~~~~rr~~----~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~ 163 (498)
T 3b6h_A 89 YAIFLMERIFDVQ-LPHYSPSDEKARM----KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLL 163 (498)
T ss_dssp HHHHHHHHTSCCC-CTTCCHHHHHHHH----HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHH
T ss_pred hHHHHHHHHcCCC-ccccCHHHHHHHH----HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHH
Confidence 221 122223221 1111111254222 223332222222000 0 0001111 2222
Q ss_pred HHHHHHhcCCCc--cccc-HHHHHHhhhhhhcCccchhhhHHHhhhhccCC------hhHHHHH---------------H
Q psy1301 155 SLLERVYNNRDK--AKMD-LNTALFSLEDIVGGHTAISNFIMKTLGFLVNH------PNVQAKI---------------Q 210 (429)
Q Consensus 155 ~l~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~------~~~~~~~---------------~ 210 (429)
.+.....++... .... .......+.++......+...+|++...+... .+..+++ .
T Consensus 164 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (498)
T 3b6h_A 164 RAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPARLARRAHRS 243 (498)
T ss_dssp HHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHHHTTCBSCC
T ss_pred HHHHHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHhccccHH
Confidence 222222355321 1000 00112222222111112334556442322111 0111111 3
Q ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHhhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCC-------CCChh
Q psy1301 211 KEVDAITLRMSG---VHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISR-------DVTLA 280 (429)
Q Consensus 211 d~l~~ll~~~~~---~~~~~i~~~~~~l~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~-------~~~~~ 280 (429)
|+++.+++..++ .+++++...+..+++|+|||+++++|++++|++||++|+||++||++++|.++ .++.+
T Consensus 244 d~l~~ll~~~~~~~~~~~~~~~~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~ 323 (498)
T 3b6h_A 244 KWLESYLLHLEEMGVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323 (498)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHH
Confidence 677777754322 26677775555556699999999999999999999999999999999998543 25899
Q ss_pred hhcCChhHHHHHHhhhcCcCCCCCccccCCCcee-----cCEEeCCCCEEeechhh-hccCCCCCCCCCCCCCCCCCCCC
Q psy1301 281 DRKQMPYTEATILESIRMIASPIVPHVATQNSSI-----GGFEVKKDTMIFLNNYD-LNMSPELWSEPENFQPERFINAD 354 (429)
Q Consensus 281 ~~~~lpyl~a~i~EtlRl~~~~~~~R~~~~d~~l-----~g~~ipkGt~v~~~~~~-~~~d~~~~~~p~~F~PeRfl~~~ 354 (429)
++++||||+|||+|+||++|++.++|.+.+|+++ +||.|||||.|+++.++ +|+||++|+||++|+||||++.+
T Consensus 324 ~l~~lpyl~a~i~E~lRl~p~~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~p~~F~PeRfl~~~ 403 (498)
T 3b6h_A 324 VLDSTPVLDSVLSESLRLTAAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPD 403 (498)
T ss_dssp HHHSCHHHHHHHHHHHHHHBCBCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTT
T ss_pred HHhcCHHHHHHHHHHHhccCCCcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCChhhcCcccccCCC
Confidence 9999999999999999999966789999999998 68999999999999999 99999999999999999999754
Q ss_pred CCc---------cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC--CCcc-c-ccce-eec-CCceE
Q psy1301 355 GRI---------VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ--QYKV-P-IGDL-ALP-YNTFR 419 (429)
Q Consensus 355 ~~~---------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~-~-~~~~-~~~-~~~~~ 419 (429)
+.. ..+..++|||+|+|+|||++||.+|++++++.|+++|+|+++++. .+++ . ..++ +++ +.+++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 483 (498)
T 3b6h_A 404 GSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVP 483 (498)
T ss_dssp SSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCE
T ss_pred cccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCcc
Confidence 321 135689999999999999999999999999999999999998763 2222 1 1233 333 45788
Q ss_pred EEEEeCC
Q psy1301 420 FNFSPRN 426 (429)
Q Consensus 420 ~~~~~r~ 426 (429)
+++++|.
T Consensus 484 ~~~~~~~ 490 (498)
T 3b6h_A 484 VRYRIRP 490 (498)
T ss_dssp EEEEECC
T ss_pred EEEEecc
Confidence 8888774
No 24
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1.3e-62 Score=483.19 Aligned_cols=395 Identities=16% Similarity=0.240 Sum_probs=280.8
Q ss_pred ccccCCCCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcC-ccccCCC
Q psy1301 20 IGERISDLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKA-TDFDGRP 97 (429)
Q Consensus 20 ~~~~~~~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~-~~f~~r~ 97 (429)
.+++..++||||++ +|++||++++.+ +|+.++.+++++|||||++++|+.++|||+||+++++++.+++ ..|..++
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~~~--~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~ 84 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQFGA--NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFH 84 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGGTC--CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHHhc--CHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHH
Confidence 44566789999999 699999999987 9999999999999999999999999999999999999998764 2343221
Q ss_pred CccccccccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-----------------------hHHH
Q psy1301 98 NISRYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-----------------------DYVD 154 (429)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~l~~ 154 (429)
. .....+++...........|+ ++|+.+.+.|+...+..+ .+.+.+++ +++.
T Consensus 85 ~-~~~~~~~g~~~~~~~~g~~~~-~~Rr~~~~~f~~~~l~~~---~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~ 159 (491)
T 3v8d_A 85 F-ALSAKAFGHRSIDPMDGNTTE-NINDTFIKTLQGHALNSL---TESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCY 159 (491)
T ss_dssp H-HHHHHHHTCCCCCGGGSSBCC-CHHHHHHHHHSHHHHHHH---HHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHH
T ss_pred H-HHHHHhcCCcccccccchhHH-HHHHHHHHHcCccchHHH---HHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHH
Confidence 1 112233433211111223387 678888777777776665 22111111 2222
Q ss_pred HHHH----HHhcCCCccccc--HHHHHHhhhhhhcCccchhhhHHHhhhhccCC--hh---HHHHH--------------
Q psy1301 155 SLLE----RVYNNRDKAKMD--LNTALFSLEDIVGGHTAISNFIMKTLGFLVNH--PN---VQAKI-------------- 209 (429)
Q Consensus 155 ~l~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~--~~---~~~~~-------------- 209 (429)
.+.. ...++.+..... ...+...+..+. .+...+|.+...++.. ++ ..+++
T Consensus 160 ~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~~ 235 (491)
T 3v8d_A 160 RVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFK----QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRES 235 (491)
T ss_dssp HHHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHH----HHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTCBS
T ss_pred HHHHHHHHHHHcCccccccchhhhhhHHHHHHHH----HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 2222 123444321100 012222222221 2344455442333322 11 11222
Q ss_pred -HHHHHHHHHHhc---CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccC----------
Q psy1301 210 -QKEVDAITLRMS---GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLIS---------- 274 (429)
Q Consensus 210 -~d~l~~ll~~~~---~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~---------- 274 (429)
.|+++.++.... ..+++++...+..+++ |+|||+++++|++++|++||++|++|++||+++++.+
T Consensus 236 ~~d~l~~l~~~~~~~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~ 315 (491)
T 3v8d_A 236 ISELISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNP 315 (491)
T ss_dssp CCHHHHHHHHHHHHHBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSC
T ss_pred ccHHHHHHHHHhhccCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccccccccccc
Confidence 356666664322 2367777777776655 9999999999999999999999999999999998743
Q ss_pred CCCChhhhcCChhHHHHHHhhhcCcCCCCCccccCCCcee----cCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCC
Q psy1301 275 RDVTLADRKQMPYTEATILESIRMIASPIVPHVATQNSSI----GGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERF 350 (429)
Q Consensus 275 ~~~~~~~~~~lpyl~a~i~EtlRl~~~~~~~R~~~~d~~l----~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf 350 (429)
..++.+++++||||++||+|+||++|++.++|.+.+|+++ +||.||||+.|.++.+++|+||++|+||++|+||||
T Consensus 316 ~~~~~~~l~~~~~l~a~i~E~lRl~p~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~p~R~ 395 (491)
T 3v8d_A 316 ICLSQAELNDLPVLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRY 395 (491)
T ss_dssp CCCCHHHHHCCHHHHHHHHHHHHHHEEECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSSTTSCCTTTT
T ss_pred ccCCHHHHhcChHHHHHHHHHhhcCCCCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCCccccCcccc
Confidence 3578999999999999999999999955688999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCc---------cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC--CCcc--cccce-eec-C
Q psy1301 351 INADGRI---------VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ--QYKV--PIGDL-ALP-Y 415 (429)
Q Consensus 351 l~~~~~~---------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~--~~~~~-~~~-~ 415 (429)
++.++.. ..+..++|||+|+|.|+|++||.+|++++++.|+++|+|+++++. .++. ...++ +++ .
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 475 (491)
T 3v8d_A 396 LDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPL 475 (491)
T ss_dssp BCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBS
T ss_pred cCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCC
Confidence 9765431 234789999999999999999999999999999999999998773 2222 12233 334 4
Q ss_pred CceEEEEEeC
Q psy1301 416 NTFRFNFSPR 425 (429)
Q Consensus 416 ~~~~~~~~~r 425 (429)
.++.|+++..
T Consensus 476 ~~i~v~~~~~ 485 (491)
T 3v8d_A 476 NDIEFKYKFK 485 (491)
T ss_dssp SCCEEEEEEC
T ss_pred CCeEEEEEec
Confidence 5888887653
No 25
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=1.1e-61 Score=472.23 Aligned_cols=373 Identities=18% Similarity=0.294 Sum_probs=270.6
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccc-ccccc----CCCCcccc-cchHHH
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISR-YNDLF----SGNRENCK-KLSQMS 120 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~-~~~~~----~~~~~~~~-~~~~w~ 120 (429)
..+|..+.+|+++|||||++++|+.++|+|+||+++++++.++ .|..++.... ....+ .+.+.... ....|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 87 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence 4789999999999999999999999999999999999999754 4554432221 11111 12211111 223488
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-----------------------hcCCCccccc--HHHH
Q psy1301 121 KAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-----------------------YNNRDKAKMD--LNTA 174 (429)
Q Consensus 121 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-----------------------~~~~~~~~~~--~~~~ 174 (429)
++|+.+.+.|+...+..+ ++.+.+++ .+++.+.... .|+.+..... ...+
T Consensus 88 -~~Rr~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~ 163 (456)
T 3mdm_A 88 -KQRRVIDLAFSRSSLVSL---METFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPL 163 (456)
T ss_dssp -HHHHHHGGGGSHHHHHTT---HHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHH
T ss_pred -HHHhhcccccCHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHH
Confidence 789999988888777776 55555555 5655554321 2332211000 0012
Q ss_pred HHhhhhhhcCc----cchhhhHHHhhhhccCChh------------HHHHH----------HHHHHHHHHHhcC-CcHHH
Q psy1301 175 LFSLEDIVGGH----TAISNFIMKTLGFLVNHPN------------VQAKI----------QKEVDAITLRMSG-VHKLK 227 (429)
Q Consensus 175 ~~~~~~~~~~~----~~~~~~~p~l~~~~~~~~~------------~~~~~----------~d~l~~ll~~~~~-~~~~~ 227 (429)
...+..+..+. ..+..++|..........+ ++++. .|+++.++....+ .++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ 243 (456)
T 3mdm_A 164 SQAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEG 243 (456)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTSSCSSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcCCCCCHHH
Confidence 22222221100 0011111111000000000 11111 1566666655432 27778
Q ss_pred HHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCc
Q psy1301 228 VIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVP 305 (429)
Q Consensus 228 i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~ 305 (429)
+..++.++++ |+|||+++++|++++|++||++|+||++|+++++|.++.++++++++||||+|||+|+||++| ++.++
T Consensus 244 l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~ 323 (456)
T 3mdm_A 244 LLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTF 323 (456)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCccccc
Confidence 8888877766 999999999999999999999999999999999998788999999999999999999999999 88888
Q ss_pred cccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHH
Q psy1301 306 HVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFT 385 (429)
Q Consensus 306 R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~ 385 (429)
|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||+++.. .....++|||.|+|.|+|++||++|+++
T Consensus 324 r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~--~~~~~~~pFg~G~r~C~G~~lA~~e~~~ 401 (456)
T 3mdm_A 324 RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAP--KPRFTYFPFSLGHRSCIGQQFAQMEVKV 401 (456)
T ss_dssp EEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSC--CCSSSCCTTCCGGGSCTTHHHHHHHHHH
T ss_pred cccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCC--CCCCcccCCCCCCcCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997642 2446899999999999999999999999
Q ss_pred HHHHHHHhcceeeCCCCCCcccccceeecCCceEEEEEeCCC
Q psy1301 386 TLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 386 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
+++.|+++|+|+++++.++++....+..++.++.+++++|..
T Consensus 402 ~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~ 443 (456)
T 3mdm_A 402 VMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGW 443 (456)
T ss_dssp HHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC
T ss_pred HHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCC
Confidence 999999999999998876555333445566799999999863
No 26
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=2.4e-62 Score=479.55 Aligned_cols=392 Identities=15% Similarity=0.202 Sum_probs=257.6
Q ss_pred eccccCCCCCCCCCC-CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 19 AIGERISDLTPMPWA-LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 19 ~~~~~~~~~ppgP~~-~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
..+++..+.||||++ +|++||++++.. +|+.++.+|+++|||||++++|+.++|||+||+++++++.++.. |+.++
T Consensus 11 ~~~~~~~~~pPgp~~~~P~iG~~~~~~~--~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~ 87 (475)
T 3b98_A 11 GRRTRRRNEPPLDKGMIPWLGHALEFGK--DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTS 87 (475)
T ss_dssp --CCCCTTCCCEECCSSTTTBTHHHHHH--CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHH
T ss_pred hhcccCCCCCCCCCCCcchHHhHHHHhh--CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchH
Confidence 344566789999998 899999999876 89999999999999999999999999999999999999987642 33222
Q ss_pred Cc-cccccccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhh--------hhc--------c--cchh-hHHHHHH
Q psy1301 98 NI-SRYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERN--------ERN--------N--NDEE-DYVDSLL 157 (429)
Q Consensus 98 ~~-~~~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~--------~~~--------~--~~~~-~l~~~l~ 157 (429)
.. ..+..+++. +....+.. ..|+.+.+.|+...+..+... ... . ...+ .++..+.
T Consensus 88 ~~~~~~~~~~g~----~~~~~~~~-~~R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (475)
T 3b98_A 88 YAQVLMKRIFNM----ILPSHNPE-SEKKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLL 162 (475)
T ss_dssp HHHHHHHHTTCC----CCTTCCHH-HHHHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhCC----CCCCCChH-HHHHHHHHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHH
Confidence 11 112222322 11112211 123344444444444433110 000 0 0111 2222222
Q ss_pred HH----HhcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC------hhHHHHH---------------HHH
Q psy1301 158 ER----VYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH------PNVQAKI---------------QKE 212 (429)
Q Consensus 158 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~------~~~~~~~---------------~d~ 212 (429)
.. ..++.++.... .+......+. .+...+|++...+... .+..+.+ .|+
T Consensus 163 ~~~~~~~~~g~~~~~~~--~~~~~~~~~~----~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 236 (475)
T 3b98_A 163 FKTGYLTVFGAENNNSA--ALTQIYEEFR----RFDKLLPKLARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQSW 236 (475)
T ss_dssp HHHHHHHHHCCTTSCHH--HHHHHHHHHH----HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHSCTTSCCCCCTTSH
T ss_pred HHHhhhheeCCccccch--hcHHHHHHHH----HHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHhhccccccHH
Confidence 22 23454322211 2222222211 1123344331111100 0111111 356
Q ss_pred HHHHHHHhc---CCcHHHHHHHHHHHhhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHH
Q psy1301 213 VDAITLRMS---GVHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTE 289 (429)
Q Consensus 213 l~~ll~~~~---~~~~~~i~~~~~~l~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~ 289 (429)
++.+++... ..+++++...+..+++|+|||+++++|++++|++||++|+||++|++ .+ .+.++.+++++|||++
T Consensus 237 l~~ll~~~~~~~~~~~~~i~~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~~~~~~~lpyl~ 313 (475)
T 3b98_A 237 LGSYVKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRLEERQKNTPVFD 313 (475)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC---------------CCHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCCHHHHhcCHHHH
Confidence 777775432 23677777444444569999999999999999999999999999999 23 3356899999999999
Q ss_pred HHHHhhhcCcCCCCCccccCCCcee-----cCEEeCCCCEEeechhh-hccCCCCCCCCCCCCCCCCCCCCCCc------
Q psy1301 290 ATILESIRMIASPIVPHVATQNSSI-----GGFEVKKDTMIFLNNYD-LNMSPELWSEPENFQPERFINADGRI------ 357 (429)
Q Consensus 290 a~i~EtlRl~~~~~~~R~~~~d~~l-----~g~~ipkGt~v~~~~~~-~~~d~~~~~~p~~F~PeRfl~~~~~~------ 357 (429)
|||+|+||++|++.++|.+.+|+++ +||.|||||.|+++.++ +||||++|+||++|+||||+++++..
T Consensus 314 a~i~E~lRl~p~~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~ 393 (475)
T 3b98_A 314 SVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFK 393 (475)
T ss_dssp HHHHHHHHHHEEECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSSTTSCCTTTTBCTTSCBCCCCBS
T ss_pred HHHHHHHhcCCccceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCCcccCCcchhcCCCCCccccccc
Confidence 9999999999965689999999999 88999999999999999 99999999999999999999754321
Q ss_pred ---cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC--CCcc-c-ccce-eec-CCceEEEEEeCCC
Q psy1301 358 ---VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ--QYKV-P-IGDL-ALP-YNTFRFNFSPRNL 427 (429)
Q Consensus 358 ---~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~--~~~~-~-~~~~-~~~-~~~~~~~~~~r~~ 427 (429)
..+..++|||+|+|.|+|++||.+|++++++.|+++|+|+++++. .+++ . ..++ +.+ +.++++++++|..
T Consensus 394 ~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~ 472 (475)
T 3b98_A 394 NGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFH 472 (475)
T ss_dssp SSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred cccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEeccc
Confidence 134689999999999999999999999999999999999998763 2222 1 1232 444 4599999999864
No 27
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=1.4e-57 Score=439.44 Aligned_cols=367 Identities=14% Similarity=0.196 Sum_probs=249.3
Q ss_pred cccCCCCCCCCCCCCeecccc-ccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCC
Q psy1301 21 GERISDLTPMPWALPIIGHLH-LLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPN 98 (429)
Q Consensus 21 ~~~~~~~ppgP~~~P~lG~~~-~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~ 98 (429)
.++.++.||||+++|++||+. .+.. +|+..+.++ ++|||||++++ ++.++|+|+||+++++++.++ .|++++.
T Consensus 21 ~~~~~~~~PGP~~~p~lG~~~~~~~~--~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~ 95 (436)
T 2cd8_A 21 MRRTQQGTTASPPVLDLGALGQDFAA--DPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWR 95 (436)
T ss_dssp -------------CCBHHHHHHHHHH--CCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGG
T ss_pred cchhccCCCCCCccccCCCCCccccc--ChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccc
Confidence 355678899999999999986 5555 899999999 99999999998 788899999999999999876 5776653
Q ss_pred c--cccc--cccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCccccc---
Q psy1301 99 I--SRYN--DLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMD--- 170 (429)
Q Consensus 99 ~--~~~~--~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~--- 170 (429)
. .... ....+..........|+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+.... +. ..++.
T Consensus 96 ~~~~~~~~~~~~~~~~l~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~--~~-~vd~~~~~ 168 (436)
T 2cd8_A 96 NSTTPLTEAEAALNHNMLESDPPRHT-RLRKLVAREFTMRRVELL---RPRVQEIVDGLVDAMLAAP--DG-RADLMESL 168 (436)
T ss_dssp GCSSCCCTTGGGTCCSGGGCCTTHHH-HHHHHHGGGSSHHHHHTT---HHHHHHHHHHHHHHHHTCT--TS-CEEHHHHT
T ss_pred ccccccccccccccccccccCchHHH-HHHHHhHHhhCHHHHHHH---HHHHHHHHHHHHHHHHhcc--CC-CcchHHHH
Confidence 2 1110 01112211112233488 889999998888888777 66666666 7777765310 00 00110
Q ss_pred -HHHHHHhhhhhhcCcc--chhhhHHHhhhhcc--CCh---hHHHHH----------------HHHHHHHHHHhc----C
Q psy1301 171 -LNTALFSLEDIVGGHT--AISNFIMKTLGFLV--NHP---NVQAKI----------------QKEVDAITLRMS----G 222 (429)
Q Consensus 171 -~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~--~~~---~~~~~~----------------~d~l~~ll~~~~----~ 222 (429)
..-..+.+..+ .|.. ....+..+....+. ..+ +..+++ .|+++.+++... .
T Consensus 169 ~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ 247 (436)
T 2cd8_A 169 AWPLPITVISEL-LGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLSALVRTSDEDGSR 247 (436)
T ss_dssp TTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHSCSSTTHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhhhccCCC
Confidence 00001111111 1111 00011111100000 000 111111 257777775432 2
Q ss_pred CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-
Q psy1301 223 VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA- 300 (429)
Q Consensus 223 ~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~- 300 (429)
.+++++..++.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||++|
T Consensus 248 ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~ 309 (436)
T 2cd8_A 248 LTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMT------------------LLDGAVEEMLRYEGP 309 (436)
T ss_dssp SCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhChh------------------hHHHHHHHHHHhcCc
Confidence 378889888888876 9999999999999999999999999999842 68999999999999
Q ss_pred CC-CCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHH
Q psy1301 301 SP-IVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMV 379 (429)
Q Consensus 301 ~~-~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A 379 (429)
++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||
T Consensus 310 ~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~~pFG~G~r~C~G~~lA 380 (436)
T 2cd8_A 310 VESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDT---------AGHLAFGHGIHFCIGAPLA 380 (436)
T ss_dssp BSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTCCTTHHHH
T ss_pred ccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCC---------CCCCCCCCCCCCCcCHHHH
Confidence 88 5999999999999999999999999999999999999999999999961 4789999999999999999
Q ss_pred HHHHHHHHHHHHHhc-ceeeCCC-CCCcccccceeecCCceEEEEEeCCC
Q psy1301 380 QLISFTTLASLFQSY-DLKKLPG-QQYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 380 ~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
++|++++++.|+++| ++++..+ .++++........+.+++|++++|.+
T Consensus 381 ~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~~ 430 (436)
T 2cd8_A 381 RLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGRE 430 (436)
T ss_dssp HHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC------
T ss_pred HHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCcc
Confidence 999999999999999 6998632 33333222334567899999999865
No 28
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=4.7e-58 Score=436.92 Aligned_cols=356 Identities=15% Similarity=0.207 Sum_probs=255.6
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCC-CccccccccC
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRP-NISRYNDLFS 107 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~-~~~~~~~~~~ 107 (429)
++++.+|++||++++.. +|+.++.+|+++|||||+ ++|+.++|+|+||+++++++.++ .|++++ .+.....+.+
T Consensus 2 ~~~~~~p~iGnl~~~~~--~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g 76 (389)
T 1n97_A 2 KRLSLREAWPYLKDLQQ--DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG 76 (389)
T ss_dssp EECCHHHHHHHHHHHHH--CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC
T ss_pred cccccccccccHHHHhh--ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC
Confidence 45667899999999876 899999999999999999 99999999999999999999877 787765 2222223333
Q ss_pred CCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHH-----------H-------HHHhcCCCccc
Q psy1301 108 GNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSL-----------L-------ERVYNNRDKAK 168 (429)
Q Consensus 108 ~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l-----------~-------~~~~~~~~~~~ 168 (429)
..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+ . ....++.+..+
T Consensus 77 -~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~dl~~~~~~~~~~vi~~~~fG~~~~~ 151 (389)
T 1n97_A 77 -RGLLTDWGESWK-EARKALKDPFLPKNVRGY---REAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSP 151 (389)
T ss_dssp -SSTTTCCHHHHH-HHHHHHCGGGSHHHHHTT---HHHHHHHHHHHHHTCCSCCEEHHHHHHHHHHHHHHHHHHSSCCCH
T ss_pred -CccccCCcHHHH-HHHHHhCcccCHHHHHHH---HHHHHHHHHHHHHHccCCcCcHHHHHHHHHHHHHHHHHcCCcchH
Confidence 211122333487 889999888887777666 33333333 333222 1 11134443221
Q ss_pred ccHHHHHHhhhhhhcCccchhhhHHHhhhhccCC--hh---HHHHHHHHHHHHHHHh--cCCcHHHHHHHHHHHhh-cch
Q psy1301 169 MDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNH--PN---VQAKIQKEVDAITLRM--SGVHKLKVIFSLEDIVG-GHT 240 (429)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~--~~---~~~~~~d~l~~ll~~~--~~~~~~~i~~~~~~l~~-G~d 240 (429)
++.+.+..+..... ...++.+ .+++.. ++ ..+.+.++++.++++. .+.+++++..++.++++ |+|
T Consensus 152 ----~~~~~~~~~~~~~~--~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~rll~~l~~~~l~~~~~~~~~aG~~ 224 (389)
T 1n97_A 152 ----SLAEHALKALDRIM--AQTRSPL-ALLDLAAEARFRKDRGALYREAEALIVHPPLSHLPRERALSEAVTLLVAGHE 224 (389)
T ss_dssp ----HHHHHHHHHHHHHH--HHHHCGG-GGGCHHHHHHHHHHHHHHHHHHGGGTTSTTGGGSCHHHHHHHHHHHHHHHSH
T ss_pred ----HHHHHHHHHHHHHH--HHHhhHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHcCch
Confidence 22222222211100 0011111 222211 11 2222333333333211 22478888888888766 999
Q ss_pred hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEe
Q psy1301 241 AISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEV 319 (429)
Q Consensus 241 tts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~i 319 (429)
||+++++|++++|++||++|+||++|++.+. |||+|+||++| ++.++|.+.+|++++||.|
T Consensus 225 Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~I 286 (389)
T 1n97_A 225 TVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQEALRLYPPAWILTRRLERPLLLGEDRL 286 (389)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHHHHHHHHSCSSCCEEEEESSCEEETTEEE
T ss_pred hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHHHHHHhcCCCccccceeeCCCceECCEEe
Confidence 9999999999999999999999999999873 99999999999 8889999999999999999
Q ss_pred CCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeC
Q psy1301 320 KKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKL 399 (429)
Q Consensus 320 pkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~ 399 (429)
||||.|.++.+++||| +|+||++|+||||+++. ...+..++|||.|+|.|+|++||.+|++++++.++++|++++.
T Consensus 287 p~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~--~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~ 362 (389)
T 1n97_A 287 PPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEER--GTPSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRLDPL 362 (389)
T ss_dssp CTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSC--CCCBTTBCTTCCSTTCCTTHHHHHHHHHHHHHHHHTTCBCCCC
T ss_pred CCCCEEEECHHHHhhh--cCCCccccCCccCCCCC--CCCCCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHhceEEeC
Confidence 9999999999999999 99999999999998651 1234689999999999999999999999999999999999988
Q ss_pred CCCCCcccccceeec-CCceEEEEEeCC
Q psy1301 400 PGQQYKVPIGDLALP-YNTFRFNFSPRN 426 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~-~~~~~~~~~~r~ 426 (429)
++.+. ..+++.. ..+++|++++|.
T Consensus 363 ~~~~~---~~~~~~~p~~~~~v~~~~~~ 387 (389)
T 1n97_A 363 PFPRV---LAQVTLRPEGGLPARPREEV 387 (389)
T ss_dssp CCCCE---EESSSEEETTCCEECCBC--
T ss_pred CCCcc---cceEEeeeCCCceEEEeecc
Confidence 76543 2344444 459999998875
No 29
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=5.3e-56 Score=426.97 Aligned_cols=362 Identities=16% Similarity=0.201 Sum_probs=256.0
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcC-CeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc--ccccccCCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHG-SIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS--RYNDLFSGNR 110 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG-~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~--~~~~~~~~~~ 110 (429)
.|++||++++.. +|+.++.+++++|| |||++++++.++|++++|++++.++ +. ..|+.++... ....+++...
T Consensus 8 ~P~lG~~~~~~~--~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~g~~~ 83 (417)
T 1izo_A 8 DKSLDNSLTLLK--EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLFGVNA 83 (417)
T ss_dssp CCCTTHHHHHHH--HGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTTCTTC
T ss_pred CCccchHHHHhh--CcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhccccc
Confidence 499999999887 99999999999998 9999999999999999999998554 33 2565443222 1223333221
Q ss_pred cccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH---------------H---hcCCCcccccH
Q psy1301 111 ENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER---------------V---YNNRDKAKMDL 171 (429)
Q Consensus 111 ~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~---------------~---~~~~~~~~~~~ 171 (429)
........|+ ++|+.+.+.|+...+..+ .+.+.+.+ ++++.+... + .++.+......
T Consensus 84 l~~~dg~~h~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~~G~~~~~~~~ 159 (417)
T 1izo_A 84 IQGMDGSAHI-HRKMLFLSLMTPPHQKRL---AELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEV 159 (417)
T ss_dssp GGGCCHHHHH-HHHHHHHHTSSHHHHHHH---HHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTH
T ss_pred eeecCChHHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHcCCCCCchHH
Confidence 1112233487 889999988888887777 44444444 444443211 0 12322111011
Q ss_pred HHHHHhhhhhhcCccchhhhHHHhhhhccCChh--------HHHHH--------HHHHHHHHHHhcC----CcHHHHHHH
Q psy1301 172 NTALFSLEDIVGGHTAISNFIMKTLGFLVNHPN--------VQAKI--------QKEVDAITLRMSG----VHKLKVIFS 231 (429)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--------~~~~~--------~d~l~~ll~~~~~----~~~~~i~~~ 231 (429)
.++.+.+..+...... ..|..........+ +.++. .|+++.+++..++ .+++++.++
T Consensus 160 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~l~~~~~~~~ 236 (417)
T 1izo_A 160 KERADDFIDMVDAFGA---VGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIE 236 (417)
T ss_dssp HHHHHHHHHHHHHTTC---CSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHHHCBCTTSCBCCHHHHHHH
T ss_pred HHHHHHHHHHHhhccc---CCccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHHHhccccCCCCCHHHHHHH
Confidence 1222222222111000 00100000000000 11111 2466666654321 267888888
Q ss_pred HHHHhhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCC
Q psy1301 232 LEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQ 310 (429)
Q Consensus 232 ~~~l~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~ 310 (429)
+..+++|+|||+++++|++++|++||++|++|++| ++||+++||+|+||++| ++.++|.+.+
T Consensus 237 ~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~E~lRl~p~~~~~~R~~~~ 299 (417)
T 1izo_A 237 LINVLRPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFGPFLGALVKK 299 (417)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHHHHHHSCCCCEEEEEECS
T ss_pred HHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHHHHhhcCCcccccceeecC
Confidence 88888899999999999999999999999999987 46999999999999999 8889999999
Q ss_pred CceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCC----CCCCccHHHHHHHHHHH
Q psy1301 311 NSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGG----RRSCMGNKMVQLISFTT 386 (429)
Q Consensus 311 d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G----~r~C~G~~~A~~e~~~~ 386 (429)
|++++||.|||||.|+++.+++||||++|+||++|+||||++.. ..+..++|||.| +|.|+|++||++|++++
T Consensus 300 d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~---~~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~ 376 (417)
T 1izo_A 300 DFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE---ENLFDMIPQGGGHAEKGHRCPGEGITIEVMKAS 376 (417)
T ss_dssp CEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCC---CCSSSCCTTCSSCTTSSSCCTTHHHHHHHHHHH
T ss_pred CeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCC---CCCcceeCCCCCCCCCCCcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999753 245689999999 59999999999999999
Q ss_pred HHHHHHhcceeeCCCCCCcccccceee-cCCceEEEEEeCCC
Q psy1301 387 LASLFQSYDLKKLPGQQYKVPIGDLAL-PYNTFRFNFSPRNL 427 (429)
Q Consensus 387 l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~ 427 (429)
++.|+++|+|++.++. .......+++ +..++.+++++|+.
T Consensus 377 l~~ll~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~r~~ 417 (417)
T 1izo_A 377 LDFLVHQIEYDVPEQS-LHYSLARMPSLPESGFVMSGIRRKS 417 (417)
T ss_dssp HHHHHHTEEEECCSCC-CCCCSSSSSCCCTTCCEEEEEEEC-
T ss_pred HHHHHHhCeEEeCCCC-cCcccccCCCCCCCCceEeeeeCCC
Confidence 9999999999987653 2332223444 45699999999863
No 30
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=3.7e-55 Score=419.32 Aligned_cols=338 Identities=14% Similarity=0.160 Sum_probs=239.6
Q ss_pred CCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhhcC-ccccCCCCcccccc
Q psy1301 27 LTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFVKA-TDFDGRPNISRYND 104 (429)
Q Consensus 27 ~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~~~-~~f~~r~~~~~~~~ 104 (429)
+||||+++|++||+++ +|+..+.+|+ +|||||++.++ |...++|++++++++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~-----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~ 75 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP-----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA 75 (404)
T ss_dssp ----CCBSSCCCSSTT-----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred CCCCCCCCCCCCCcCC-----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence 6999999999999875 8899999995 69999999975 677788999999999998763 23333433322111
Q ss_pred -----ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHH--
Q psy1301 105 -----LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALF-- 176 (429)
Q Consensus 105 -----~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~-- 176 (429)
..++..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.....-+. ..++. ..+..
T Consensus 76 ~~~~~~~~~~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~~-~~d~~-~~~~~~~ 149 (404)
T 1jfb_A 76 SGKQAAKAKPTFVDMDPPEHM-HQRSMVEPTFTPEAVKNL---QPYIQRTVDDLLEQMKQKGCANG-PVDLV-KEFALPV 149 (404)
T ss_dssp HHHHHTTSCCCGGGCCTTHHH-HHHTTTGGGGSHHHHHHH---HHHHHHHHHHHHHHHHHHCSTTS-CEEHH-HHTTTHH
T ss_pred cccchhcccCcccccCchhHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCC-CccHH-HHHHHHH
Confidence 1122211112233488 789999998988888888 77777777 78877765320000 00000 00000
Q ss_pred --hhhhhhcCccc-hhhhHHH----hhhhccCChh---------------HHHHH----HHHHHHHHHHhc---CCcHHH
Q psy1301 177 --SLEDIVGGHTA-ISNFIMK----TLGFLVNHPN---------------VQAKI----QKEVDAITLRMS---GVHKLK 227 (429)
Q Consensus 177 --~~~~~~~~~~~-~~~~~p~----l~~~~~~~~~---------------~~~~~----~d~l~~ll~~~~---~~~~~~ 227 (429)
.+.....|... -..++-. +..+.+..++ ++++. .|+++.+++... ..++++
T Consensus 150 ~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~e 229 (404)
T 1jfb_A 150 PSYIIYTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEPKDDIISKLCTEQVKPGNIDKSD 229 (404)
T ss_dssp HHHHHHHHHTCCGGGHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHTTTTTSSCHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHhhccCCCCCHHH
Confidence 00000111100 0000100 0000011110 11111 357777775432 237888
Q ss_pred HHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CC
Q psy1301 228 VIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IV 304 (429)
Q Consensus 228 i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~ 304 (429)
+..++.++++ |+|||+++++|++++|++||++|+||+++ .+|++|||+|+||++| ++ .+
T Consensus 230 i~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------------------~~yl~a~i~E~lRl~p~~~~~~ 291 (404)
T 1jfb_A 230 AVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------PSLAPQFVEELCRYHTASALAI 291 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSCCSCC
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC------------------hHhHHHHHHHHHhhCCCccccc
Confidence 8888888866 99999999999999999999999999982 2799999999999999 88 59
Q ss_pred ccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHH
Q psy1301 305 PHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISF 384 (429)
Q Consensus 305 ~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~ 384 (429)
+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++. ..++|||.|+|.|+|++||++|++
T Consensus 292 ~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~-------~~~~~Fg~G~r~C~G~~lA~~e~~ 364 (404)
T 1jfb_A 292 KRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPP-------QDPLGFGFGDHRCIAEHLAKAELT 364 (404)
T ss_dssp EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCS-------SCCCTTCCGGGSCTTHHHHHHHHH
T ss_pred eeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCC-------CCCCCCCCCCccCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999853 258999999999999999999999
Q ss_pred HHHHHHHHhc-ceeeCCC
Q psy1301 385 TTLASLFQSY-DLKKLPG 401 (429)
Q Consensus 385 ~~l~~ll~~f-~~~~~~~ 401 (429)
++++.|+++| ++++.++
T Consensus 365 ~~l~~ll~~f~~~~l~~~ 382 (404)
T 1jfb_A 365 TVFSTLYQKFPDLKVAVP 382 (404)
T ss_dssp HHHHHHHHHCTTCEESSC
T ss_pred HHHHHHHHHCCCceecCC
Confidence 9999999999 7998653
No 31
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=8.5e-55 Score=416.52 Aligned_cols=352 Identities=14% Similarity=0.169 Sum_probs=248.9
Q ss_pred CCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEe----e-CC-ccEEEEcChHHHHHHH-hhcCccccCC
Q psy1301 24 ISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLK----L-GV-VPAIVVNGLENIKEVL-FVKATDFDGR 96 (429)
Q Consensus 24 ~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~----l-g~-~~~vvv~~p~~i~~il-~~~~~~f~~r 96 (429)
..++||||+++|+. +.. +|+.++.+| ++|||||+++ + ++ .++|+|+||+++++++ .++ .|+++
T Consensus 8 ~~~lppgp~~~p~~-----~~~--~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~ 77 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TNC--DPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTR 77 (406)
T ss_dssp CCCEEECCTTTTCE-----ETT--EECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECC
T ss_pred CCCCcccCcccCCC-----CCC--CcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccc
Confidence 35689999999987 444 899999999 9999999999 7 88 8999999999999999 554 35555
Q ss_pred CCc--c--cccc-ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCccccc
Q psy1301 97 PNI--S--RYND-LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMD 170 (429)
Q Consensus 97 ~~~--~--~~~~-~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~ 170 (429)
+.. . .+.. ...+..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +. ..++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---g~-~~d~~ 149 (406)
T 1ued_A 78 PQFTQSKSGAHVEAQFVGQISTYDPPEHT-RLRKMLTPEFTVRRIRRM---EPAIQSLIDDRLDLLEAE---GP-SADLQ 149 (406)
T ss_dssp CCC---------CGGGTTCGGGCCTTHHH-HHHHHHGGGSSHHHHHHH---HHHHHHHHHHHHHHHHHH---CT-TEEHH
T ss_pred ccccccccccccccccccccccCCCHHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHHHhc---CC-CeeHH
Confidence 431 1 1110 0011111112233488 889999999988888877 66666666 777766531 11 00000
Q ss_pred --H-H-HHHHhhhhhhcCcc--chhhhHHHhhhhcc---CCh---h------------HHHHH----HHHHHHHHHHhc-
Q psy1301 171 --L-N-TALFSLEDIVGGHT--AISNFIMKTLGFLV---NHP---N------------VQAKI----QKEVDAITLRMS- 221 (429)
Q Consensus 171 --~-~-~~~~~~~~~~~~~~--~~~~~~p~l~~~~~---~~~---~------------~~~~~----~d~l~~ll~~~~- 221 (429)
. . -..+.+..+ .|.. ....+..+....+. ..+ + ++++. .|+++.+++...
T Consensus 150 ~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~ 228 (406)
T 1ued_A 150 GLFADPVGAHALCEL-LGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGD 228 (406)
T ss_dssp HHTHHHHHHHHHHHH-HTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGG
T ss_pred HHHHHHhHHHHHHHH-cCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCC
Confidence 0 0 001111111 1110 00011111100000 000 0 11111 256777775532
Q ss_pred CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC
Q psy1301 222 GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA 300 (429)
Q Consensus 222 ~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~ 300 (429)
..+++++..++.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||++|
T Consensus 229 ~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p 290 (406)
T 1ued_A 229 NVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE------------------KAERVVNELVRYLS 290 (406)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH------------------HHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH------------------HHHHHHHHHHhcCC
Confidence 2378889888888876 9999999999999999999999999999864 57999999999999
Q ss_pred -CCC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHH
Q psy1301 301 -SPI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKM 378 (429)
Q Consensus 301 -~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~ 378 (429)
++. ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||- ..++|||.|+|.|+|++|
T Consensus 291 ~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~~pFG~G~r~C~G~~l 361 (406)
T 1ued_A 291 PVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAA---------VSDVGFGHGIHYCVGAAL 361 (406)
T ss_dssp SSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------CCCCTTCCSTTSCTTHHH
T ss_pred CcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCC---------CCCCCCCCCCcCCCcHHH
Confidence 886 999999999999999999999999999999999999999999999982 478999999999999999
Q ss_pred HHHHHHHHHHHHHHhc-ceeeCCC-CCCcccccceeecCCceEEEE
Q psy1301 379 VQLISFTTLASLFQSY-DLKKLPG-QQYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 379 A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 422 (429)
|++|++++++.|+++| ++++.++ .++++....+..+ .+++|++
T Consensus 362 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~ 406 (406)
T 1ued_A 362 ARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW 406 (406)
T ss_dssp HHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred HHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence 9999999999999999 7999753 2333322233344 7777753
No 32
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=8.5e-55 Score=419.58 Aligned_cols=360 Identities=17% Similarity=0.177 Sum_probs=253.9
Q ss_pred cCCCCCCCCCCCCeeccccccCCC---CchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCC
Q psy1301 23 RISDLTPMPWALPIIGHLHLLGQY---EVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPN 98 (429)
Q Consensus 23 ~~~~~ppgP~~~P~lG~~~~~~~~---~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~ 98 (429)
...++||| ++|++.+.... .+|+..+.+|++ ||||+++++ |+.++|||+++++++++++++ ..|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 34678888 99987554311 268999999966 799999998 688999999999999999765 37887765
Q ss_pred -cccc---c-c-c---cCC-----CCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH-H--
Q psy1301 99 -ISRY---N-D-L---FSG-----NRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER-V-- 160 (429)
Q Consensus 99 -~~~~---~-~-~---~~~-----~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~-~-- 160 (429)
.... . . + .++ ..........|+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+... .
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~-~~Rr~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~ 151 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHT-AYRGLTLNWFQPASIRKL---EENIRRIAQASVQRLLDFDGEC 151 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHH-HHHHHHHTTSSHHHHGGG---HHHHHHHHHHHHHHHHTSSSEE
T ss_pred cccCCcccccchhccccccccccccccccCChHHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHHHHhCCCe
Confidence 2211 1 1 2 321 111112233488 889999888887777776 55555555 555555432 0
Q ss_pred -----------------hcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhcc-CC-hh---HHHHH---------
Q psy1301 161 -----------------YNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLV-NH-PN---VQAKI--------- 209 (429)
Q Consensus 161 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~-~~-~~---~~~~~--------- 209 (429)
.++.+..... ++......+..........+|++ .++. .. ++ ..+.+
T Consensus 152 d~~~~~~~~~~~~vi~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (428)
T 1cpt_A 152 DFMTDCALYYPLHVVMTALGVPEDDEP--LMLKLTQDFFGVHEPDEQAVAAP-RQSADEAARRFHETIATFYDYFNGFTV 228 (428)
T ss_dssp EHHHHTTTTHHHHHHHHHHTCCGGGHH--HHHHHHHTTTCC-----------------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehHHHHHhhhHHHHHHHHcCCCHhHHH--HHHHHHHHHHhcccccccccccc-cccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 1333222111 33333333221111111122332 2221 10 11 11111
Q ss_pred -------HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCC
Q psy1301 210 -------QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVT 278 (429)
Q Consensus 210 -------~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~ 278 (429)
.|+++.+++...+ .+++++..++.++++ |+|||+++++|++++|++||++|+||++|++
T Consensus 229 ~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~---------- 298 (428)
T 1cpt_A 229 DRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA---------- 298 (428)
T ss_dssp HHTTSCCSSHHHHHHHCBSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG----------
T ss_pred HHHcCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH----------
Confidence 2466666654322 278888888888876 9999999999999999999999999999965
Q ss_pred hhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCc
Q psy1301 279 LADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRI 357 (429)
Q Consensus 279 ~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~ 357 (429)
|++|||+|+||++| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||.+
T Consensus 299 --------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~----- 365 (428)
T 1cpt_A 299 --------LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPN----- 365 (428)
T ss_dssp --------GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSC-----
T ss_pred --------HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCCC-----
Confidence 78999999999999 8889999999999999999999999999999999999999999999999952
Q ss_pred cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcc-eeeCCCCCCcccccceeecCCceEEEEEeC
Q psy1301 358 VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNFSPR 425 (429)
Q Consensus 358 ~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 425 (429)
.++|||.|+|.|+|++||++|++++++.|+++|+ +++.+.. .+....++..+.+++|+++||
T Consensus 366 ----~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~lpv~~~p~ 428 (428)
T 1cpt_A 366 ----RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPP--RLVATNFVGGPKNVPIRFTKA 428 (428)
T ss_dssp ----CCCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCC--EECCCSSBCSEEECEEEEEEC
T ss_pred ----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCc--ccccCccccCcceeeEEeeCC
Confidence 3899999999999999999999999999999997 7876322 222334556678899999876
No 33
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=3.7e-55 Score=420.83 Aligned_cols=363 Identities=15% Similarity=0.185 Sum_probs=255.9
Q ss_pred CCCCCCCCeeccccccCCCCchHHHHHHHHHhc-CCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc--cccc
Q psy1301 28 TPMPWALPIIGHLHLLGQYEVPYQAFKVISKTH-GSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS--RYND 104 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~y-G~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~--~~~~ 104 (429)
|||| |++||++++.. +|+.++.+++++| ||||++.+++.+++++++|++++ ++.++ ..|+.++.+. ....
T Consensus 4 pPg~---P~iG~~~~~~~--~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~ 76 (415)
T 3awm_A 4 TPHT---KGPDETLSLLA--DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKT 76 (415)
T ss_dssp --------CCCCHHHHHH--STTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTT
T ss_pred CCCC---CccchHHHHHh--ChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhh
Confidence 6666 89999999877 8999999999999 79999999988999999999987 66654 3676543322 1222
Q ss_pred ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH------------------hcCCC
Q psy1301 105 LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV------------------YNNRD 165 (429)
Q Consensus 105 ~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~------------------~~~~~ 165 (429)
+++...........|+ ++|+.+.+.|+...+..+ .+.+.+.+ ++++.+.... .++.+
T Consensus 77 ~~g~~~l~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~~G~~ 152 (415)
T 3awm_A 77 LLGQGGVQGLDGETHR-HRKQMFMGLMTPERVRAL---AQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAWAGVP 152 (415)
T ss_dssp TSCSSSGGGCCHHHHH-HHHHHHHTTCCHHHHHHH---HHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHHHTCC
T ss_pred ccCCcceeecCcHHHH-HHHHHHHHhcCHHHHHHH---HHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHHcCCC
Confidence 3332211122233487 889999988888888877 55555555 5555543311 12332
Q ss_pred cccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCChh--------HHHHH--------HHHHHHHHHHhcC----CcH
Q psy1301 166 KAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPN--------VQAKI--------QKEVDAITLRMSG----VHK 225 (429)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--------~~~~~--------~d~l~~ll~~~~~----~~~ 225 (429)
.......++.+.+..+......+ .|...+......+ +.++. .|+++.++...++ .++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~g~~~~~ 229 (415)
T 3awm_A 153 LPDDEAGNRAGELRALFDAAGSA---SPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGSGTAAYAIAWHRDRHDDLLSP 229 (415)
T ss_dssp CCGGGHHHHHHHHHHHHHSTTCS---SHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCTTSHHHHHHHCBCTTSCBCCH
T ss_pred CCcchHHHHHHHHHHHHHHhccc---CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHhhhhccCCCCCH
Confidence 11111112222222221111100 0100000000000 11111 2567777754321 277
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCC
Q psy1301 226 LKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIV 304 (429)
Q Consensus 226 ~~i~~~~~~l~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~ 304 (429)
+++.+++..+++|+|||+++++|++++|++||++|++|++| +||+++||+|+||++| ++.+
T Consensus 230 ~~~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~lRl~p~~~~~ 291 (415)
T 3awm_A 230 HVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDYAELFVQEVRRFYPFFPAV 291 (415)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTHHHHHHHHHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHHHHHHHHHHhhcCCCcccc
Confidence 88888888888899999999999999999999999999986 5899999999999999 8889
Q ss_pred ccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCC----CCCCccHHHHH
Q psy1301 305 PHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGG----RRSCMGNKMVQ 380 (429)
Q Consensus 305 ~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G----~r~C~G~~~A~ 380 (429)
+|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++... .+..++|||.| +|.|+|++||+
T Consensus 292 ~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~---~~~~~~~FG~G~r~~~r~C~G~~lA~ 368 (415)
T 3awm_A 292 VARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDE---DSFNFIPQGGGDHYLGHRCPGEWIVL 368 (415)
T ss_dssp EEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCC---CSSSCCTTCCSCTTTSCCCTTHHHHH
T ss_pred ceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCC---CCCCccCCCCCCCCCCCcCchHHHHH
Confidence 999999999999999999999999999999999999999999999997542 34689999999 59999999999
Q ss_pred HHHHHHHHHHHHhcceeeCCCCCCcccccceee-cCCceEEEEEeCC
Q psy1301 381 LISFTTLASLFQSYDLKKLPGQQYKVPIGDLAL-PYNTFRFNFSPRN 426 (429)
Q Consensus 381 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~r~ 426 (429)
+|++++++.|+++|+|++.++. ..+....+++ +..++.+++++..
T Consensus 369 ~e~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~ 414 (415)
T 3awm_A 369 AIMKVAAHLLVNAMRYDVPDQD-LSIDFARLPALPKSGFVMRNVHIG 414 (415)
T ss_dssp HHHHHHHHHHHHTCEEECCSCC-CCBCTTSSSCCBTTCCEEEEEESC
T ss_pred HHHHHHHHHHHHhcEEEeCCCC-CCcCcCCCccccCCCceEEEEeCC
Confidence 9999999999999999987643 2333233444 4568999998653
No 34
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=5.2e-55 Score=429.70 Aligned_cols=374 Identities=14% Similarity=0.186 Sum_probs=249.9
Q ss_pred ccCCCCCCCCCCCCeeccccccCC---CCchHHHHHHHHHhcCC-eeEEeeCCccE-------EEEcChHHHHHHHhhcC
Q psy1301 22 ERISDLTPMPWALPIIGHLHLLGQ---YEVPYQAFKVISKTHGS-IFRLKLGVVPA-------IVVNGLENIKEVLFVKA 90 (429)
Q Consensus 22 ~~~~~~ppgP~~~P~lG~~~~~~~---~~~~~~~~~~~~~~yG~-if~i~lg~~~~-------vvv~~p~~i~~il~~~~ 90 (429)
+.+.+.||||.+||++||++++.. ..+++.++.++.++||+ ||++++++.++ +++++++..+.++.+..
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 456788999999999999987630 13899999999999999 99999998888 66677776665554421
Q ss_pred ----ccccCCCCccccccccCCCCcccc---cchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH---
Q psy1301 91 ----TDFDGRPNISRYNDLFSGNRENCK---KLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER--- 159 (429)
Q Consensus 91 ----~~f~~r~~~~~~~~~~~~~~~~~~---~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~--- 159 (429)
..|..... ... .++++....++ ....|+ ++|+++.+.+.... ..+ .+.+.+.+ ++++.+...
T Consensus 104 v~k~~~~~~~~~-~~~-~l~g~~~~~~~~~~~g~~h~-~~R~~~~~~f~~~~-~~~---~~~i~~~~~~ll~~~~~~~~~ 176 (495)
T 3dsk_A 104 VEKKDLLTGTYM-PST-ELTGGYRILSYLDPSEPKHE-KLKNLLFFLLKSSR-NRI---FPEFQATYSELFDSLEKELSL 176 (495)
T ss_dssp EECSSCTTSSSC-CCG-GGGTTCCCGGGCCTTSHHHH-HHHHHHHHHHHHTT-TTH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCC-CCc-cccCCCcceeeeCCCchHHH-HHHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHhcc
Confidence 22222111 112 44443322223 223487 78888887765432 444 44444444 555555431
Q ss_pred --------------------HhcCCCccccc----HHHHHHhhhhhh-cCcc--chhhhHHHh-hhhccCC----hhHHH
Q psy1301 160 --------------------VYNNRDKAKMD----LNTALFSLEDIV-GGHT--AISNFIMKT-LGFLVNH----PNVQA 207 (429)
Q Consensus 160 --------------------~~~~~~~~~~~----~~~~~~~~~~~~-~~~~--~~~~~~p~l-~~~~~~~----~~~~~ 207 (429)
..++.+..... ...+.+.+..+. .... .+...+..+ ....... .+..+
T Consensus 177 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 256 (495)
T 3dsk_A 177 KGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQ 256 (495)
T ss_dssp HSSEESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHH
Confidence 13333211100 001111111110 0000 000111110 0011000 01111
Q ss_pred HH----HHHHHHHHHHhc--CCcHHHHHHHHHH-H-hhcchhHHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhccC-CCC
Q psy1301 208 KI----QKEVDAITLRMS--GVHKLKVIFSLED-I-VGGHTAISNFIMKTLGFLVN-HPNVQAKIQKEVDAITLIS-RDV 277 (429)
Q Consensus 208 ~~----~d~l~~ll~~~~--~~~~~~i~~~~~~-l-~~G~dtts~tl~w~l~~L~~-~P~~~~~l~~Ei~~~~~~~-~~~ 277 (429)
.. .+.++.+++... ..+++++...+.. + ++|+|||+++++|++++|+. ||++|++|++|++++++.+ +.+
T Consensus 257 ~~~~~~~~~~~~ll~~~~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~ 336 (495)
T 3dsk_A 257 RLYEFFLESAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGEL 336 (495)
T ss_dssp HHHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCC
Confidence 11 223344444332 2377777764444 4 45999999999999999995 9999999999999999854 679
Q ss_pred ChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCcee----cCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCC
Q psy1301 278 TLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSI----GGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFIN 352 (429)
Q Consensus 278 ~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l----~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~ 352 (429)
+++++++|||++|||+|+||++| ++...|.+.+|+++ +||.||||+.|+++.+++||||++|+||++|+||||++
T Consensus 337 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~dp~~F~P~Rfl~ 416 (495)
T 3dsk_A 337 TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416 (495)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTTTTSCCTTTTCH
T ss_pred CHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCCccccCCcccCC
Confidence 99999999999999999999999 88877889999999 49999999999999999999999999999999999997
Q ss_pred CCCCc-------cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCC
Q psy1301 353 ADGRI-------VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQ 402 (429)
Q Consensus 353 ~~~~~-------~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~ 402 (429)
+++.. .....++|||+|+|.|+|++||.+|++++++.|+++|++..+++.
T Consensus 417 ~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~ 473 (495)
T 3dsk_A 417 EEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEVG 473 (495)
T ss_dssp HHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCCC
Confidence 53111 111234566666699999999999999999999999999887543
No 35
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=9.2e-54 Score=410.15 Aligned_cols=361 Identities=15% Similarity=0.178 Sum_probs=250.8
Q ss_pred CCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhc-CCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCccc
Q psy1301 24 ISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTH-GSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNISR 101 (429)
Q Consensus 24 ~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~y-G~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~ 101 (429)
....||+|+++|.+..-..+.. +|+..+.+| ++| ||||++++ |+.++|+|+||+++++++.++ .|++++....
T Consensus 3 ~~~~~~~~~~~P~~~~~~~~~~--~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~ 77 (412)
T 2zbx_A 3 DTATTPQTTDAPAFPSNRSCPY--QLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDN 77 (412)
T ss_dssp -----CCCCSSCBSSCCCSSTT--SCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTT
T ss_pred CCCCCCCCCCCCCCCCCchhcc--ChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCccccc
Confidence 3456888989987643445655 899999999 788 99999998 889999999999999999875 3444433111
Q ss_pred cccc------c--CCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcc---cc
Q psy1301 102 YNDL------F--SGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKA---KM 169 (429)
Q Consensus 102 ~~~~------~--~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~---~~ 169 (429)
+..+ + .+..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +..-+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---g~~~d~~~~~ 150 (412)
T 2zbx_A 78 FPATSPRFEAVRESPQAFIGLDPPEHG-TRRRMTISEFTVKRIKGM---RPEVEEVVHGFLDEMLAA---GPTADLVSQF 150 (412)
T ss_dssp SCCCSGGGC----CCCCGGGCCTTHHH-HHHTTTGGGGSHHHHHHH---HHHHHHHHHHHHHHHHHH---CSCEEHHHHT
T ss_pred ccccccccccccccccccccCCcHHHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhc---CCCccHHHHH
Confidence 1111 0 11111112233488 889999998888888887 66677777 777777532 11000 00
Q ss_pred cHHHHHHhhhhhhcCcc--chhhhHHHhhhhcc---CC--hh------------HHHHH----HHHHHHHHHHhcC---C
Q psy1301 170 DLNTALFSLEDIVGGHT--AISNFIMKTLGFLV---NH--PN------------VQAKI----QKEVDAITLRMSG---V 223 (429)
Q Consensus 170 ~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~---~~--~~------------~~~~~----~d~l~~ll~~~~~---~ 223 (429)
...-..+.+..+ .|.. ....+..+....+. .. .+ ++++. .|+++.+++...+ .
T Consensus 151 ~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l 229 (412)
T 2zbx_A 151 ALPVPSMVICRL-LGVPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGLVGALVADQLANGEI 229 (412)
T ss_dssp TTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHTTTTTTSS
T ss_pred HHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcccCCCC
Confidence 000001111111 1110 00001111000000 00 00 11111 2567777765322 3
Q ss_pred cHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-C
Q psy1301 224 HKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-S 301 (429)
Q Consensus 224 ~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~ 301 (429)
+++++..++.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||++| +
T Consensus 230 s~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~ 291 (412)
T 2zbx_A 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADRS------------------LVPGAVEELLRYLAIA 291 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhChH------------------hHHHHHHHHHHhCCcc
Confidence 78888888888876 9999999999999999999999999999743 78999999999999 8
Q ss_pred CC-CccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHH
Q psy1301 302 PI-VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQ 380 (429)
Q Consensus 302 ~~-~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~ 380 (429)
+. ++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||+
T Consensus 292 ~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~ 362 (412)
T 2zbx_A 292 DIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSA---------RHHLAFGFGVHQCLGQNLAR 362 (412)
T ss_dssp GGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTSCTTHHHHH
T ss_pred ccccceeeCCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCC---------CCccCCCCCCCcCccHHHHH
Confidence 84 999999999999999999999999999999999999999999999972 46899999999999999999
Q ss_pred HHHHHHHHHHHHhc-ceeeCCC-CCCcccccceeecCCceEEEEEe
Q psy1301 381 LISFTTLASLFQSY-DLKKLPG-QQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 381 ~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
+|++++++.|+++| ++++.++ .++++....+...+..++|+...
T Consensus 363 ~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~~ 408 (412)
T 2zbx_A 363 LELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWHH 408 (412)
T ss_dssp HHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECCC
T ss_pred HHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeeccc
Confidence 99999999999999 7999754 23333222334457788887654
No 36
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=2.2e-54 Score=412.86 Aligned_cols=347 Identities=11% Similarity=0.095 Sum_probs=248.4
Q ss_pred ccCCCCchHHHHHHHHHhc--CCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccc-cCCCCcccccchH
Q psy1301 42 LLGQYEVPYQAFKVISKTH--GSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDL-FSGNRENCKKLSQ 118 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~y--G~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~-~~~~~~~~~~~~~ 118 (429)
.+.. +|+.++.+|+++| ||||++++++ ++|+|+||+++++++.+ ...|++++........ .++..........
T Consensus 16 ~~~~--~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~ 91 (398)
T 4fb2_A 16 GPDG--TPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETGEFELMMAGQDDPV 91 (398)
T ss_dssp CTTS--SSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC----CCCTTTTCCTTH
T ss_pred hhhc--ChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCcccccCcccCCchH
Confidence 3444 9999999999999 9999999986 59999999999999954 4578877654431111 1111111123344
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHHhhhhhhcCcc--chhhhHHHh
Q psy1301 119 MSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHT--AISNFIMKT 195 (429)
Q Consensus 119 w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l 195 (429)
|+ ++|+.+.+.|+...+..+ .+.+.+++ ++++.+.....++. ...+...-..+.+..+ .|.. ....+..+.
T Consensus 92 ~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~-~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~ 165 (398)
T 4fb2_A 92 HK-KYRQLVAKPFSPEATDLF---TEQLRQSTNDLIDARIELGEGDA-ATWLANEIPARLTAIL-LGLPPEDGDTYRRWV 165 (398)
T ss_dssp HH-HHHHHHHTTTCHHHHHTT---HHHHHHHHHHHHHTTTTTTEEEH-CCCCCTTHHHHHHHHH-TTSCGGGHHHHHHHH
T ss_pred HH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHhhcCCccH-HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 88 789999888888777777 55566656 66655533210000 0000000111111111 1110 001111111
Q ss_pred hhhc-cCC----hh------------HHHHH----HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHHH
Q psy1301 196 LGFL-VNH----PN------------VQAKI----QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKTL 250 (429)
Q Consensus 196 ~~~~-~~~----~~------------~~~~~----~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~l 250 (429)
...+ +.. .+ ++++. .|+++.+++...+ .+++++...+.++++ |+|||+++++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l 245 (398)
T 4fb2_A 166 WAITHVENPEEGAEIFAELVAHARTLIAERRTNPGNDIMSRVIMSKIDGESLSEDDLIGFFTILLLGGIDNTARFLSSVF 245 (398)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcccCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 0000 000 00 11111 3567777765432 378889888888876 9999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeech
Q psy1301 251 GFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNN 329 (429)
Q Consensus 251 ~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~ 329 (429)
++|++||++|+||++|++ |++|||+|+||++| ++ ++|.+.+|++++||.|||||.|+++.
T Consensus 246 ~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~ 306 (398)
T 4fb2_A 246 WRLAWDIELRRRLIAHPE------------------LIPNAVDELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAMLWF 306 (398)
T ss_dssp HHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCCBC-EEEEECSCEEETTEEECTTCEEEECH
T ss_pred HHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCCcC-CCeeeCCCEEECCEEECCCCEEEech
Confidence 999999999999999965 56899999999999 88 99999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCCcccc
Q psy1301 330 YDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQYKVPI 408 (429)
Q Consensus 330 ~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~ 408 (429)
+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.|+++| +++++++.+....
T Consensus 307 ~~~~rdp~~~~dp~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~- 376 (398)
T 4fb2_A 307 PIASRDRSAFDSPDNIVIERTP---------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNKECEWL- 376 (398)
T ss_dssp HHHTTCTTTSSSTTSCCTTCCS---------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTSCCEEE-
T ss_pred HhhcCChhhCCCcCeeCCCCCC---------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCCCceec-
Confidence 9999999999999999999972 4789999999999999999999999999999999 9999877654432
Q ss_pred cceeecCCceEEEEEeCCC
Q psy1301 409 GDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 409 ~~~~~~~~~~~~~~~~r~~ 427 (429)
.+....+..++|++++|..
T Consensus 377 ~~~~~~~~~lpv~~~~~~~ 395 (398)
T 4fb2_A 377 MGQVAGMLHVPIIFPKGKR 395 (398)
T ss_dssp CSSBCEEEECEEECCCCCC
T ss_pred cccccccceeEEEEcCCCC
Confidence 2556667889999998854
No 37
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=2.5e-54 Score=422.42 Aligned_cols=373 Identities=18% Similarity=0.201 Sum_probs=250.8
Q ss_pred ccccCCCCCCCCCCCCeeccccccCC---CC-chHHHHHHHHHhcCC-eeEEeeCC-------ccEEEEcChHHHHHHHh
Q psy1301 20 IGERISDLTPMPWALPIIGHLHLLGQ---YE-VPYQAFKVISKTHGS-IFRLKLGV-------VPAIVVNGLENIKEVLF 87 (429)
Q Consensus 20 ~~~~~~~~ppgP~~~P~lG~~~~~~~---~~-~~~~~~~~~~~~yG~-if~i~lg~-------~~~vvv~~p~~i~~il~ 87 (429)
....|.+.||||.+||++||++++.. .. +|+.++.++.++||+ ||++++++ ..+|++++....+.++.
T Consensus 3 ~~~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~ 82 (473)
T 3dan_A 3 PSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFD 82 (473)
T ss_dssp GGGSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGC
T ss_pred CCCCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecC
Confidence 34567888999999999999987531 14 799999999999999 99999974 34455555555444443
Q ss_pred h----cCccccCCCCccccccccCCCCccccc---chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH
Q psy1301 88 V----KATDFDGRPNISRYNDLFSGNRENCKK---LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER 159 (429)
Q Consensus 88 ~----~~~~f~~r~~~~~~~~~~~~~~~~~~~---~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~ 159 (429)
. +...+... +.....+.++....++. ...|+ ++|+++.+.|+. .+..+ .+.+.+.+ ++++.+...
T Consensus 83 ~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~h~-~~R~~~~~~f~~-~~~~~---~~~i~~~~~~ll~~~~~~ 155 (473)
T 3dan_A 83 VSKVEKKDLFTGT--YMPSTKLTGGYRVLSYLDPSEPRHA-QLKNLLFFMLKN-SSNRV---IPQFETTYTELFEGLEAE 155 (473)
T ss_dssp TTTEECSSCTTSS--SCCCGGGGTTSCCGGGCCTTSHHHH-HHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred Ccceecccccccc--ccCCccccCCCcceeeeCCCcHHHH-HHHHHHHHHHHH-HHHHH---HHHHHHHHHHHHHHHHHH
Confidence 1 11122221 11111233322222222 23487 789888887776 46666 55566656 666665432
Q ss_pred H-----------------------hcCCCccc--cc--HHHHHHhhhhhhcCccchhhhHHHhhhhc-cCC--------h
Q psy1301 160 V-----------------------YNNRDKAK--MD--LNTALFSLEDIVGGHTAISNFIMKTLGFL-VNH--------P 203 (429)
Q Consensus 160 ~-----------------------~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~--------~ 203 (429)
. .++.+... +. ...+...+..+..... +...+|.+...+ ... .
T Consensus 156 ~~~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~lp~~~~~~~~~~~~~~~~~~~ 234 (473)
T 3dan_A 156 LAKNGKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPT-LDLGLPWFLQEPLLHTFRLPAFLIK 234 (473)
T ss_dssp HHHHSCEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGG-CCCSCCHHHHHHHHSSSCCCGGGTH
T ss_pred hccCCcccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccch-hhhcchHHHHHHHhhhccchHhhhh
Confidence 1 23332211 00 0011111110000000 000111110111 010 1
Q ss_pred h----HHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHh-h-cchhHHHHHHHHHHHHhc-CHHHHHHHHHHHHHhhcc-
Q psy1301 204 N----VQAKIQKEVDAITLRMS--GVHKLKVIFSLEDIV-G-GHTAISNFIMKTLGFLVN-HPNVQAKIQKEVDAITLI- 273 (429)
Q Consensus 204 ~----~~~~~~d~l~~ll~~~~--~~~~~~i~~~~~~l~-~-G~dtts~tl~w~l~~L~~-~P~~~~~l~~Ei~~~~~~- 273 (429)
+ ..+.+.++++.+++..+ ..+++++...+..+. . |+|||+++++|++++|++ ||++|++|++|++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~ll~~~~~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~ 314 (473)
T 3dan_A 235 STYNKLYDYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSY 314 (473)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred hchhhhHHHHHHHHHHHHHhHhhcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 1 11222445555665432 337788877664444 2 888899999999999999 799999999999999875
Q ss_pred C-CCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCcee----cCEEeCCCCEEeechhhhccCCCCCCCCCCCCC
Q psy1301 274 S-RDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSI----GGFEVKKDTMIFLNNYDLNMSPELWSEPENFQP 347 (429)
Q Consensus 274 ~-~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l----~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~P 347 (429)
. +.++.+++++|||++|||+|+||++| ++...|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|||
T Consensus 315 ~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~dp~~F~p 394 (473)
T 3dan_A 315 GDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVP 394 (473)
T ss_dssp STTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSSTTSCCT
T ss_pred cCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCCcccCCc
Confidence 4 67899999999999999999999999 88877779999999 999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCCCccc---------cCCCCCCCccHHHHHHHHHHHHHHHHHhcceeeCCCCC
Q psy1301 348 ERFINADGRIVKPEHFLP---------FSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ 403 (429)
Q Consensus 348 eRfl~~~~~~~~~~~~~p---------Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~ 403 (429)
|||++.. .....++| ||+|+|.|+|++||.+|++++++.|+++|++..+++.+
T Consensus 395 ~R~~~~~---~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~ 456 (473)
T 3dan_A 395 DRFVGDG---EALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGE 456 (473)
T ss_dssp TTTSGGG---GGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEEC
T ss_pred cccCCCc---ccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccCCc
Confidence 9999862 12234444 55555999999999999999999999999987765543
No 38
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=9.3e-54 Score=409.95 Aligned_cols=367 Identities=13% Similarity=0.158 Sum_probs=254.0
Q ss_pred ccccCCCCCCCCCCCCee--ccccccCC---CCchHHHHHHHHHhcC--CeeEEe-eCCccEEEEcChHHHHHHHhhcCc
Q psy1301 20 IGERISDLTPMPWALPII--GHLHLLGQ---YEVPYQAFKVISKTHG--SIFRLK-LGVVPAIVVNGLENIKEVLFVKAT 91 (429)
Q Consensus 20 ~~~~~~~~ppgP~~~P~l--G~~~~~~~---~~~~~~~~~~~~~~yG--~if~i~-lg~~~~vvv~~p~~i~~il~~~~~ 91 (429)
..+++.++||||.+.|.. +.+-.+.. ..+|+.++.+|+ +|| |||+++ +| ++|+|+|++++++++.+. .
T Consensus 5 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~~-~ 80 (415)
T 2zwu_A 5 TIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYEDY-R 80 (415)
T ss_dssp ------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHCT-T
T ss_pred cccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcCc-c
Confidence 446788999999999875 54321111 138999999995 899 999999 55 699999999999999754 4
Q ss_pred cccCCC-CccccccccCCCC-cccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH--------
Q psy1301 92 DFDGRP-NISRYNDLFSGNR-ENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------- 160 (429)
Q Consensus 92 ~f~~r~-~~~~~~~~~~~~~-~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------- 160 (429)
.|++++ .+....... +.. ........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+....
T Consensus 81 ~f~~~~~~~~~~~~~~-~~~~l~~~~g~~~~-~~R~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~~~~~ 155 (415)
T 2zwu_A 81 HFSSECPFIPREAGEA-YDFIPTSMDPPEQR-QFRALANQVVGMPVVDKL---ENRIQELACSLIESLRPQGQCNFTEDY 155 (415)
T ss_dssp TEETTSCSSSHHHHHH-CCCTTTTCCTTTTH-HHHHHHHHHHSHHHHHHH---HHHHHHHHHHHHHHHGGGTEEEHHHHT
T ss_pred ccCCCcccCCCCcccc-ccccCccCCCcHHH-HHHHHHHhhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 788776 222111111 221 1122333488 789999888888888777 56566666 6666654321
Q ss_pred -----------hcCCCcccccHHHHHHhhhhhhcCccc--hhhhHHHhhhhccCChhHHHHH----HHHHHHHHHHhcC-
Q psy1301 161 -----------YNNRDKAKMDLNTALFSLEDIVGGHTA--ISNFIMKTLGFLVNHPNVQAKI----QKEVDAITLRMSG- 222 (429)
Q Consensus 161 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~----~d~l~~ll~~~~~- 222 (429)
.++.+..... .+......+...... .......+..++. ..++++. .|+++.+++...+
T Consensus 156 ~~~~~~~vi~~~~G~~~~~~~--~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~--~~i~~r~~~~~~dll~~ll~~~~~~ 231 (415)
T 2zwu_A 156 AEPFPIRIFMLLAGLPEEDIP--HLKYLTDQMTRPDGSMTFAEAKEALYDYLI--PIIEQRRQKPGTDAISIVANGQVNG 231 (415)
T ss_dssp TTHHHHHHHHHHHTCCGGGHH--HHHHHHHHHHSCCSSSCHHHHHHHHHHHHH--HHHHHHHHSCCSSHHHHHHTCEETT
T ss_pred HHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHHhccCHHHHHHHHHHHHHHHH--HHHHHHHhCCCCCHHHHHHHhhhcC
Confidence 0121111000 111111111100000 0000000000000 0011111 2566666654222
Q ss_pred --CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCc
Q psy1301 223 --VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMI 299 (429)
Q Consensus 223 --~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~ 299 (429)
.+++++...+.++++ |+|||+++++|++++|++||++|+|+++|++ |++|||+|+||++
T Consensus 232 ~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~ 293 (415)
T 2zwu_A 232 RPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE------------------RIPAACEELLRRF 293 (415)
T ss_dssp EECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhc
Confidence 378888888888876 9999999999999999999999999999954 7899999999999
Q ss_pred C-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHH
Q psy1301 300 A-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKM 378 (429)
Q Consensus 300 ~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~ 378 (429)
| ++.+ |.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||- ..++|||.|+|.|+|++|
T Consensus 294 p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~l 363 (415)
T 2zwu_A 294 SLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQK---------VSHTTFGHGSHLCLGQHL 363 (415)
T ss_dssp CCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCSS---------CCCCTTCCGGGCCSSHHH
T ss_pred CCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCCC---------CCCCCCCCCCccCCCHHH
Confidence 9 8888 9999999999999999999999999999999999999999999952 468999999999999999
Q ss_pred HHHHHHHHHHHHHHhcc-eeeCCCCCCcccccceeecCCceEEEEEeCCCC
Q psy1301 379 VQLISFTTLASLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNFSPRNLR 428 (429)
Q Consensus 379 A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 428 (429)
|.+|++++++.|+++|+ +++.++..++ ....+...+.+++|++++|...
T Consensus 364 A~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~lpv~~~~r~~~ 413 (415)
T 2zwu_A 364 ARREIIVTLKEWLTRIPDFSIAPGAQIQ-HKSGIVSGVQALPLVWDPATTK 413 (415)
T ss_dssp HHHHHHHHHHHHHHHCCSCEECTTCCCC-EECSSBCEESCCEEECCGGGCC
T ss_pred HHHHHHHHHHHHHHhCCCCEECCCcccc-cCCccccCcceeEEEEecCCCC
Confidence 99999999999999998 9998643331 2334556688999999998753
No 39
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=2e-53 Score=406.70 Aligned_cols=345 Identities=13% Similarity=0.202 Sum_probs=245.8
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCC--c-cc---cccccCCCCcccc
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPN--I-SR---YNDLFSGNRENCK 114 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~--~-~~---~~~~~~~~~~~~~ 114 (429)
.+.. +|+.++.+| ++|||||++++ |+.++|+|+|++++++++.++ .|++++. + .. +.....+......
T Consensus 16 ~~~~--~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (403)
T 3aba_A 16 SCPF--LPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQ 90 (403)
T ss_dssp SSTT--SCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTC
T ss_pred cccc--ChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccC
Confidence 3555 899999999 89999999998 899999999999999999875 4766642 1 11 1111122211122
Q ss_pred cchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcc---cccHHHHHHhhhhhhcCcc--ch
Q psy1301 115 KLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKA---KMDLNTALFSLEDIVGGHT--AI 188 (429)
Q Consensus 115 ~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~ 188 (429)
....|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +..-+ .+...-..+.+..+ .|.. ..
T Consensus 91 ~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~---~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~ 162 (403)
T 3aba_A 91 DEPEHT-SDRKLLAKEFTVRRMQAL---RPNIQRIVDEHLDAIEAR---GGPVDLVKTFANAVPSMVISDL-FGVPVERR 162 (403)
T ss_dssp CTTHHH-HHHHHHHHHSCHHHHHTT---HHHHHHHHHHHHHHHHHH---CSCEEHHHHTTTHHHHHHHHHH-HTCCGGGH
T ss_pred CchhHH-HHHHHHHhhcCHHHHHHH---HHHHHHHHHHHHHHHHhc---CCCccHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 233488 889999998888888777 66666667 777777531 11000 00000001111111 1110 00
Q ss_pred hhhHHHhhhhcc--CC-h---hHHHHH----------------HHHHHHHHHHhc---CCcHHHHHHHHHHHhh-cchhH
Q psy1301 189 SNFIMKTLGFLV--NH-P---NVQAKI----------------QKEVDAITLRMS---GVHKLKVIFSLEDIVG-GHTAI 242 (429)
Q Consensus 189 ~~~~p~l~~~~~--~~-~---~~~~~~----------------~d~l~~ll~~~~---~~~~~~i~~~~~~l~~-G~dtt 242 (429)
..+..+....+. .. + +..+.+ .|+++.+++... ..+++++..++.++++ |+|||
T Consensus 163 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~dTt 242 (403)
T 3aba_A 163 AEFQDIAEAMMRVDQDAAATEAAGMRLGGLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTT 242 (403)
T ss_dssp HHHHHHHHHHSBSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCCTTCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 011111100000 00 0 111111 246666665432 1378888888888876 99999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CCccccCCCceecCEEeC
Q psy1301 243 SNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IVPHVATQNSSIGGFEVK 320 (429)
Q Consensus 243 s~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~~R~~~~d~~l~g~~ip 320 (429)
+++++|++++|++||++|+||++|++ |++|||+|+||++| ++ .++|.+.+|++++||.||
T Consensus 243 ~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip 304 (403)
T 3aba_A 243 ACMIGLGTALLLDSPDQLALLREDPS------------------LVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIA 304 (403)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhcCCCcccccceEeCCCeEECCEEEC
Confidence 99999999999999999999999853 78999999999999 88 599999999999999999
Q ss_pred CCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeC
Q psy1301 321 KDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKL 399 (429)
Q Consensus 321 kGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~ 399 (429)
|||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus 305 ~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~ 375 (403)
T 3aba_A 305 KGEQVVAHVLAADFDPAFVEEPERFDITRRP---------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLA 375 (403)
T ss_dssp TTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEES
T ss_pred CCCEEEechhhhCCChhhCCCccccCCCCCC---------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceec
Confidence 9999999999999999999999999999983 3689999999999999999999999999999999 69987
Q ss_pred CCC-CCcccccceeecCCceEEEEEeCC
Q psy1301 400 PGQ-QYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 400 ~~~-~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
++. ++++....+...+.+++|++++|+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 403 (403)
T 3aba_A 376 KPVEELRFRHDMVFYGVHELPVTWHHHH 403 (403)
T ss_dssp SCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred CCccccccccCcccCCcceeEEEecCCC
Confidence 642 233322234456889999998884
No 40
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=7.8e-53 Score=402.93 Aligned_cols=355 Identities=14% Similarity=0.185 Sum_probs=252.1
Q ss_pred CCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEee-CCcc-EEEEcChHHHHHHHhhcCccccCCCCcccc
Q psy1301 25 SDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKL-GVVP-AIVVNGLENIKEVLFVKATDFDGRPNISRY 102 (429)
Q Consensus 25 ~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~-~vvv~~p~~i~~il~~~~~~f~~r~~~~~~ 102 (429)
.+.+|+|+++|+.++ ... +|+.++.+++ +|||||++++ +|.+ +|+|+||+++++++.++ .|++++....+
T Consensus 7 ~~~~~~~~~~p~~~~---~~~--~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~ 78 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDL---PGS--DFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQ 78 (406)
T ss_dssp -CCSCCEEECCCCCC---CTT--CCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTT
T ss_pred hhhccCCCCCCCCcc---ccc--CchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCC
Confidence 467888888999888 333 8999999985 8999999997 5666 99999999999999873 67776543211
Q ss_pred ----cc-ccC-CCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcc---cccHH
Q psy1301 103 ----ND-LFS-GNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKA---KMDLN 172 (429)
Q Consensus 103 ----~~-~~~-~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~---~~~~~ 172 (429)
.. +.+ +..........|+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+... +..-+ .+...
T Consensus 79 ~~~~~~~~~~~~~~l~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---~~~~d~~~~~~~~ 151 (406)
T 1s1f_A 79 VTRLAPHFIPARGAVGFLDPPDHT-RLRRSVAAAFTARGVERV---RERSRGMLDELVDAMLRA---GPPADLTEAVLSP 151 (406)
T ss_dssp BCBSSSSCSSCTTSGGGCCTTHHH-HHHHHHHHHHSHHHHHHH---HHHHHHHHHHHHHHHHHH---CSSEEHHHHTTTH
T ss_pred cccccccccccccccccCCchHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHHhc---CCCccHHHHHhhH
Confidence 11 111 2211122233488 889999999988888888 66677777 777777531 10000 00000
Q ss_pred HHHHhhhhhhcCcc--chhhhHHHh---hhhc--cC-ChhHHHHH----------------HHHHHHHHHHhc--CCcHH
Q psy1301 173 TALFSLEDIVGGHT--AISNFIMKT---LGFL--VN-HPNVQAKI----------------QKEVDAITLRMS--GVHKL 226 (429)
Q Consensus 173 ~~~~~~~~~~~~~~--~~~~~~p~l---~~~~--~~-~~~~~~~~----------------~d~l~~ll~~~~--~~~~~ 226 (429)
-..+.+..+ .|.. ....+..+. .... +. ..+..+.+ .|+++.+++... ..+++
T Consensus 152 ~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~ls~~ 230 (406)
T 1s1f_A 152 FPIAVICEL-MGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDSAGEDVTSLLGAAVGRDEITLS 230 (406)
T ss_dssp HHHHHHHHH-HTCCGGGHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCSCCCSHHHHHHHHHHTTSSCHH
T ss_pred hHHHHHHHH-hCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcccCCCHH
Confidence 011111111 1110 000011110 0000 00 11111111 256777775432 23788
Q ss_pred HHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC--
Q psy1301 227 KVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-- 302 (429)
Q Consensus 227 ~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-- 302 (429)
++..++.++++ | |||+++++|++++|++||++|+||++|++ |++|||+|+||++| ++
T Consensus 231 el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~ 291 (406)
T 1s1f_A 231 EAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEPE------------------IRPRAIDELLRWIPHRNAV 291 (406)
T ss_dssp HHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHSCCBSSC
T ss_pred HHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhCCCcccc
Confidence 88888888876 9 99999999999999999999999999864 68999999999999 88
Q ss_pred CCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHH
Q psy1301 303 IVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLI 382 (429)
Q Consensus 303 ~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e 382 (429)
.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|
T Consensus 292 ~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e 362 (406)
T 1s1f_A 292 GLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSP---------NPHVSFGFGPHYCPGGMLARLE 362 (406)
T ss_dssp CCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC-----------CCCCTTCCSTTCCTTHHHHHHH
T ss_pred CcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCC---------CCCCCCCCCCCCCcCHHHHHHH
Confidence 6999999999999999999999999999999999999999999999995 3589999999999999999999
Q ss_pred HHHHHHHHHHhc-ceeeCCCC-CCcccccceeecCCceEEEEE
Q psy1301 383 SFTTLASLFQSY-DLKKLPGQ-QYKVPIGDLALPYNTFRFNFS 423 (429)
Q Consensus 383 ~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 423 (429)
++++++.|+++| ++++.++. ++++....+...+.+++|++.
T Consensus 363 ~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~ 405 (406)
T 1s1f_A 363 SELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH 405 (406)
T ss_dssp HHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred HHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence 999999999999 79998762 333322234556788888763
No 41
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1e-52 Score=402.45 Aligned_cols=345 Identities=14% Similarity=0.163 Sum_probs=245.6
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc---c-ccc--CCCCccccc
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY---N-DLF--SGNRENCKK 115 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~---~-~~~--~~~~~~~~~ 115 (429)
.+.. +|+.++.+| ++|||||++++++.++|+|+||+++++++.++. |++++..... . .+. .+.......
T Consensus 17 ~~~~--~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (411)
T 3a4g_A 17 TFWQ--NPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD 91 (411)
T ss_dssp GGTT--CCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC
T ss_pred hhhc--CchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC
Confidence 3555 899999999 999999999999999999999999999998763 8776543200 0 111 122111122
Q ss_pred chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHH
Q psy1301 116 LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTAL 175 (429)
Q Consensus 116 ~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~ 175 (429)
...|+ ++|+.+.+.|+...+..+ .+.+.+++ ++++.+.... .++.+..... .+.
T Consensus 92 g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~ 165 (411)
T 3a4g_A 92 PPDHT-RLRKLVGRSFTVRRMNEL---EPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAEDRD--DFS 165 (411)
T ss_dssp TTHHH-HHHHHHHTTCCHHHHHHH---HHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHHHTCCGGGHH--HHH
T ss_pred chHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCCCHHHHH--HHH
Confidence 23488 889999998888877777 55555555 5555543210 1121111000 111
Q ss_pred HhhhhhhcCccchhhhHH---HhhhhccCChhHHHHH----HHHHHHHHHHhc----CCcHHHHHHHHHHHhh-cchhHH
Q psy1301 176 FSLEDIVGGHTAISNFIM---KTLGFLVNHPNVQAKI----QKEVDAITLRMS----GVHKLKVIFSLEDIVG-GHTAIS 243 (429)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p---~l~~~~~~~~~~~~~~----~d~l~~ll~~~~----~~~~~~i~~~~~~l~~-G~dtts 243 (429)
.....+... ........ .+..++ ...++++. .|+++.+++... ..+++++...+.++++ |+|||+
T Consensus 166 ~~~~~~~~~-~p~~~~~~~~~~~~~~~--~~~i~~r~~~~~~d~l~~ll~~~~~~~~~ls~~ei~~~~~~l~~AG~dTt~ 242 (411)
T 3a4g_A 166 AWSSVLVDD-SPADDKNAAMGKLHGYL--SDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTV 242 (411)
T ss_dssp HHHHHHTTS-SCTTTHHHHHHHHHHHH--HHHHHHHHHSCCSSHHHHHHHCCCTTCCCCCHHHHHHHHHHHHHHHSHHHH
T ss_pred HHHHHHhcc-CCHHHHHHHHHHHHHHH--HHHHHHHHhCCCCCHHHHHHHhhccCCCCCCHHHHHHHHHHHHHhchhhHH
Confidence 111111100 00000000 000000 00011111 257777776542 1378888888888876 999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CCccccCCCceecCEEeCC
Q psy1301 244 NFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IVPHVATQNSSIGGFEVKK 321 (429)
Q Consensus 244 ~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~~R~~~~d~~l~g~~ipk 321 (429)
++++|++++|++||++|+||++|++ |++|||+|+||++| ++ .++|.+.+|++++||.|||
T Consensus 243 ~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~ 304 (411)
T 3a4g_A 243 NLIGNGVLALLTHPDQRKLLAEDPS------------------LISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA 304 (411)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECT
T ss_pred HHHHHHHHHHHhCHHHHHHHhcCHH------------------HHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECC
Confidence 9999999999999999999999853 78999999999999 88 6999999999999999999
Q ss_pred CCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCC
Q psy1301 322 DTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLP 400 (429)
Q Consensus 322 Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~ 400 (429)
||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.+
T Consensus 305 Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~ 375 (411)
T 3a4g_A 305 GEMVMLGLAAANRDADWMPEPDRLDITRDA---------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAV 375 (411)
T ss_dssp TCEEEEBHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred CCEEEeChhhhCCChhhcCCccccCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcEECC
Confidence 999999999999999999999999999983 3689999999999999999999999999999999 699975
Q ss_pred CC-CCcccccceeecCCceEEEEEeCCC
Q psy1301 401 GQ-QYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 401 ~~-~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
+. ++++........+.+++|++++|.+
T Consensus 376 ~~~~~~~~~~~~~~~~~~lpv~~~~r~~ 403 (411)
T 3a4g_A 376 GLDELVYRESTLVRGLSRMPVTMGPRSA 403 (411)
T ss_dssp CGGGCCBCCCTTBCCBSCCEEECCCCCC
T ss_pred CccccccccCccccCcceeEEEecCcch
Confidence 42 3333222344567899999998864
No 42
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=1.8e-53 Score=407.62 Aligned_cols=344 Identities=13% Similarity=0.163 Sum_probs=240.1
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc------ccccCCCCccccc
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY------NDLFSGNRENCKK 115 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~------~~~~~~~~~~~~~ 115 (429)
.+.. +|+.++.+| ++|||||++++++.++|+|+|++++++++.++ ..|++++..... ....+ .......
T Consensus 10 ~~~~--~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 84 (404)
T 3ejb_B 10 EFLK--NPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQN-QMMLFQN 84 (404)
T ss_dssp HHHH--CHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHH-TSGGGCC
T ss_pred cccc--CchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhh-cchhhcC
Confidence 4444 899999998 68999999999999999999999999999987 477776542211 11111 1111122
Q ss_pred chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHH
Q psy1301 116 LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTAL 175 (429)
Q Consensus 116 ~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~ 175 (429)
...|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.... .++.+..... .+.
T Consensus 85 g~~h~-~~Rr~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~ 158 (404)
T 3ejb_B 85 QPDHR-RLRTLASGAFTPRTTESY---QPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDRE--QLK 158 (404)
T ss_dssp TTHHH-HHHHHHHGGGSHHHHHTT---HHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHHHTCCGGGHH--HHH
T ss_pred CchHH-HHHHHHHhhcCHHHHHHH---HHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHH--HHH
Confidence 33488 889999988888777776 44444444 4444332110 2232221111 222
Q ss_pred HhhhhhhcCccchhhhHHHhhhhccCChh--------HHHHH----HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cc
Q psy1301 176 FSLEDIVGGHTAISNFIMKTLGFLVNHPN--------VQAKI----QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GH 239 (429)
Q Consensus 176 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--------~~~~~----~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~ 239 (429)
.....+......... ............+ ++++. .|+++.++ ...+ .+++++...+.++++ |+
T Consensus 159 ~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll-~~~~~~~ls~~el~~~~~~l~~AG~ 236 (404)
T 3ejb_B 159 EWAASLIQTIDFTRS-RKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLL-KGREKDKLTEEEAASTCILLAIAGH 236 (404)
T ss_dssp HHHHHHHGGGSTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHH-HC----CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHH-hcccCCCCCHHHHHHHHHHHHHcch
Confidence 222221100000000 0000000000000 11111 35677777 3221 278888888888766 99
Q ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEE
Q psy1301 240 TAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFE 318 (429)
Q Consensus 240 dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ 318 (429)
|||+++++|++++|++||++|+||++|++ |+++||+|+||++| ++.++|.+.+|++++||.
T Consensus 237 dTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ 298 (404)
T 3ejb_B 237 ETTVNLISNSVLCLLQHPEQLLKLRENPD------------------LIGTAVEECLRYESPTQMTARVASEDIDICGVT 298 (404)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCEEEEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCcccccceEeCCCeEECCEE
Confidence 99999999999999999999999999865 67999999999999 888999999999999999
Q ss_pred eCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-cee
Q psy1301 319 VKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLK 397 (429)
Q Consensus 319 ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~ 397 (429)
|||||.|.++.+++||||++|+||++|+||||- ..++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus 299 ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~---------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 369 (404)
T 3ejb_B 299 IRQGEQVYLLLGAANRDPSIFTNPDVFDITRSP---------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQRMPSLN 369 (404)
T ss_dssp ECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSS---------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ECCCCEEEecHHHhCCChhhCCCcceeCCCCCC---------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCcccc
Confidence 999999999999999999999999999999982 3689999999999999999999999999999999 999
Q ss_pred eCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 398 KLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
+.++. +++........+.+++|+++||.
T Consensus 370 l~~~~-~~~~~~~~~~~~~~lpv~~~~~~ 397 (404)
T 3ejb_B 370 LADFE-WRYRPLFGFRALEELPVTFEASW 397 (404)
T ss_dssp EC--C-CCBCSCSSBCCBSCCEEECC---
T ss_pred cCCCC-ceeccCcccCCcceeEEEEeccc
Confidence 98543 33322334556889999999874
No 43
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=4.6e-53 Score=407.77 Aligned_cols=354 Identities=11% Similarity=0.134 Sum_probs=253.5
Q ss_pred CCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEe--------eCCccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 25 SDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLK--------LGVVPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 25 ~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~--------lg~~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
-..||+|.++++++....-.. +|+.++.++ ++||||+++. +|+.++++|++++++++++++. ..|+++
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~--~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~ 92 (433)
T 3ivy_A 17 VPSPNLPPGFDFTDPAIYAER--LPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSY 92 (433)
T ss_dssp ---CCCCTTCCTTCHHHHTTC--CCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEEST
T ss_pred cCCCCCCCCCCCCCHHHhhcC--CccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCC
Confidence 456788888888877654444 899999999 7899999999 5668999999999999999765 468776
Q ss_pred CCccccc--------cc-cCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH------
Q psy1301 97 PNISRYN--------DL-FSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV------ 160 (429)
Q Consensus 97 ~~~~~~~--------~~-~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~------ 160 (429)
+...... .. ..+..........|+ ++|+.+.+.|+...+..+ .+.+.+.+ ++++.+....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~d~~~ 168 (433)
T 3ivy_A 93 ENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHT-RLRKIISRGFTPRAVGRL---HDELQERAQKIAAEAAAAGSGDFVE 168 (433)
T ss_dssp TTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHH-HHHHHHGGGSCHHHHHTT---HHHHHHHHHHHHHHHHHHCEEEHHH
T ss_pred cccccccccccccccccccccCCccccChHHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHhhCCCeeHHH
Confidence 5433221 00 111111112233488 889999998988888877 66666666 7777665321
Q ss_pred -------------hcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCChhHHHHH----------------HH
Q psy1301 161 -------------YNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKI----------------QK 211 (429)
Q Consensus 161 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~----------------~d 211 (429)
.++.+..... .+......+.... .|.+ ... ...+..+.+ .|
T Consensus 169 ~~~~~~~~~vi~~l~G~~~~~~~--~~~~~~~~~~~~~------~p~~-~~~-~~~~~~~~~~~~~~~~i~~r~~~~~~d 238 (433)
T 3ivy_A 169 QVSCELPLQAIAGLLGVPQEDRG--KLFHWSNEMTGNE------DPEY-AHI-DPKASSAELIGYAMKMAEEKAKNPADD 238 (433)
T ss_dssp HTTSHHHHHHHHHHHTCCHHHHH--HHHHHHTTCSCCC------CGGG-TTC-CHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHhccC------Cchh-hhH-HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 1222111111 2222222221100 0100 000 001111111 35
Q ss_pred HHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChh
Q psy1301 212 EVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPY 287 (429)
Q Consensus 212 ~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpy 287 (429)
+++.+++...+ .+++++...+.++++ |+|||+++++|++++|++||++|+||++|++
T Consensus 239 ll~~ll~~~~~~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------- 299 (433)
T 3ivy_A 239 IVTQLIQADIDGEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP------------------- 299 (433)
T ss_dssp CHHHHHSCC--CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-------------------
T ss_pred HHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-------------------
Confidence 66666644322 378888888888766 9999999999999999999999999999965
Q ss_pred HHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCcccc
Q psy1301 288 TEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPF 366 (429)
Q Consensus 288 l~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pF 366 (429)
++||+|+||++| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++||
T Consensus 300 -~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~---------~~~l~F 369 (433)
T 3ivy_A 300 -ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNP---------NPHVGF 369 (433)
T ss_dssp -TTHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---------CCCCTT
T ss_pred -cchhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCC---------CCCCCC
Confidence 699999999999 888999999999999999999999999999999999999999999999983 368999
Q ss_pred C-CCCCCCccHHHHHHHHHHHHHHHHHhcc-eeeCCCCCCcccccceeecCCceEEEEEeCCC
Q psy1301 367 S-GGRRSCMGNKMVQLISFTTLASLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 367 g-~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
| .|+|.|+|++||++|++++++.|+++|+ ++++++..+ ........+..++|++++|..
T Consensus 370 Gg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~~R~~ 430 (433)
T 3ivy_A 370 GGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPER--LRSGWLNGIKHWQVDYTGRCP 430 (433)
T ss_dssp CSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEE--CCCSSBCCEEECEEESCC---
T ss_pred CCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCce--eccCcccCcceeEEEEecccc
Confidence 9 9999999999999999999999999999 999754322 222345556789999998853
No 44
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=4.6e-53 Score=403.70 Aligned_cols=340 Identities=13% Similarity=0.117 Sum_probs=243.4
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccccC--CCCcccccchHHHHHHH
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFS--GNRENCKKLSQMSKAIR 124 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~~--~~~~~~~~~~~w~~~lR 124 (429)
.+|+.++.+|+++ |||+++..++ +.++|+||+++++++.++ ..|++++.... ....+ +..........|+ ++|
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~~~~g~~h~-~~R 98 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVT-PGLGKVMQFIPLQQDGAEHK-AFR 98 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSS-TTHHHHHCCTTTTCCHHHHH-HHH
T ss_pred cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCC-CccccccccCccccCCcHHH-HHH
Confidence 3999999999988 9999999874 589999999999999765 47877763221 11111 1111112233488 889
Q ss_pred HHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHHhhhhhhcCcc--chhhhHHHhhhhcc-
Q psy1301 125 AFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHT--AISNFIMKTLGFLV- 200 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~- 200 (429)
+.+.+.|+...+..+ ++.+.+.+ ++++.+......+. ...+...-....+..+ .+.. ....+..+....+.
T Consensus 99 ~~~~~~f~~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~-~~~~~~~~~~~v~~~~-~G~~~~~~~~~~~~~~~~~~~ 173 (396)
T 3oft_A 99 TPVMKGLASRFVVAL---EPKVQAVARKLMESLRPRGSCDF-VSDFAEILPLNIFLTL-IDVPLEDRPRLRQLGVQLTRP 173 (396)
T ss_dssp HHHHHHTCHHHHHHH---HHHHHHHHHHHHHHHGGGSEEEH-HHHTTTTHHHHHHHHH-TTCCGGGHHHHHHHHHHHHSC
T ss_pred HHhhhhhCHHHHHHH---HHHHHHHHHHHHHHhhhcCCccH-HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHhCC
Confidence 999999988888888 66677766 77777654210000 0000000000111111 1110 11111112111111
Q ss_pred --CC--hhHHHHH----------------HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcC
Q psy1301 201 --NH--PNVQAKI----------------QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNH 256 (429)
Q Consensus 201 --~~--~~~~~~~----------------~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~ 256 (429)
.. .+..+.+ .|+++.+++...+ .+++++...+.++++ |+|||+++++|++++|++|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~ 253 (396)
T 3oft_A 174 DGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARH 253 (396)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhC
Confidence 00 1111122 2466666654322 278888888888766 9999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhhhccC
Q psy1301 257 PNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMS 335 (429)
Q Consensus 257 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d 335 (429)
|++|+||++|++ |+++||+|+||++| + .++|.+.+|++++||.|||||.|+++.+++|||
T Consensus 254 P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rd 314 (396)
T 3oft_A 254 PEDQRLLRERPD------------------LIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLD 314 (396)
T ss_dssp HHHHHHHHHCGG------------------GHHHHHHHHHHHCCCB-EEEEEESSCEEETTEEECTTCEEEEETHHHHTC
T ss_pred HHHHHHHHhCHH------------------hHHHHHHHHHHhcCcc-cCceecCCCEEECCEEECCCCEEEeChHHhCCC
Confidence 999999999975 77999999999999 8 999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCCcccccceeec
Q psy1301 336 PELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQYKVPIGDLALP 414 (429)
Q Consensus 336 ~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~ 414 (429)
|++|+||++|+||||++ +..++|||.|+|.|+|++||.+|++++++.|+++| ++++.++.+..+ ..+....
T Consensus 315 p~~~~dp~~F~PeR~~~-------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~-~~~~~~~ 386 (396)
T 3oft_A 315 PASFEAPEEVRFDRGLA-------PIRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAVTM-KGGNVGA 386 (396)
T ss_dssp TTTSSSTTSCCSCCCCC-------GGGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCCEE-ECSSBCE
T ss_pred cccCCCcCccCCCCCCC-------CCCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCcee-ccccccC
Confidence 99999999999999974 35899999999999999999999999999999999 999987765443 2234555
Q ss_pred CCceEEEEE
Q psy1301 415 YNTFRFNFS 423 (429)
Q Consensus 415 ~~~~~~~~~ 423 (429)
+..++|++.
T Consensus 387 ~~~lpv~~~ 395 (396)
T 3oft_A 387 CTALPLVWR 395 (396)
T ss_dssp EEECEEEEC
T ss_pred cccceEEeC
Confidence 667888764
No 45
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=3.7e-53 Score=405.57 Aligned_cols=345 Identities=14% Similarity=0.180 Sum_probs=245.5
Q ss_pred cccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCcccccc---cc-----CCCCc
Q psy1301 41 HLLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYND---LF-----SGNRE 111 (429)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~---~~-----~~~~~ 111 (429)
..+.. +|+..+.+| ++|||||++++ |+.++|+|+||+++++++.++ .|++++....+.. +. .+...
T Consensus 20 ~~~~~--~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (408)
T 3abb_A 20 RTCPY--QPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPL 94 (408)
T ss_dssp CSSTT--SCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTT
T ss_pred ccccc--CchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCcccccccccc
Confidence 34555 899999999 89999999998 889999999999999999875 3444432111110 11 01111
Q ss_pred ccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCccccc----HHHHHHhhhhhhcCcc
Q psy1301 112 NCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMD----LNTALFSLEDIVGGHT 186 (429)
Q Consensus 112 ~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 186 (429)
.......|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +. ..++. ..-..+.+..+ .|..
T Consensus 95 ~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---g~-~~d~~~~~~~~~~~~vi~~~-~G~~ 165 (408)
T 3abb_A 95 IGVDDPVHA-RQRRMLIPSFGVKRMNAI---RPRLQSLVDRLLDDMLAK---GP-GADLVSAFALPVPSVAICEL-LGVP 165 (408)
T ss_dssp TTCCTTHHH-HHHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHHHHHT---CS-CEEHHHHTTTHHHHHHHHHH-HTCC
T ss_pred ccCCchHHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhc---CC-CeehHHHHHHHHHHHHHHHH-hCCC
Confidence 122233488 889999999988888888 66677777 777777531 11 00000 00001111111 1110
Q ss_pred --chhhhHHHhhhhc-----cCChh------------HHHHH----HHHHHHHHHHhc---CCcHHHHHHHHHHHhh-cc
Q psy1301 187 --AISNFIMKTLGFL-----VNHPN------------VQAKI----QKEVDAITLRMS---GVHKLKVIFSLEDIVG-GH 239 (429)
Q Consensus 187 --~~~~~~p~l~~~~-----~~~~~------------~~~~~----~d~l~~ll~~~~---~~~~~~i~~~~~~l~~-G~ 239 (429)
....+..+....+ ....+ ++++. .|+++.+++... ..+++++..++.++++ |+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~ 245 (408)
T 3abb_A 166 YGDHDFFEECSRNFVGAATSAEADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGH 245 (408)
T ss_dssp GGGHHHHHHHHHHHC------CCSSHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHH
Confidence 0001111110000 00001 11111 257777776532 2388889888888876 99
Q ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEE
Q psy1301 240 TAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFE 318 (429)
Q Consensus 240 dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ 318 (429)
|||+++++|++++|++||++|+||++|++ |++|||+|+||++| ++.++|.+.+|++++||.
T Consensus 246 dTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~G~~ 307 (408)
T 3abb_A 246 ETTVNAIALGALTLIQHPEQIDVLLRDPG------------------AVSGVVEELLRFTSVSDHIVRMAKEDIEVGGAT 307 (408)
T ss_dssp HHHHHHHHHHHHHHHTCGGGGGGGGSCHH------------------HHHHHHHHHHHHHCSSCEEEEEESSCEEETTEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCcccccceEeCCCeEECCEE
Confidence 99999999999999999999999998753 68999999999999 888999999999999999
Q ss_pred eCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-cee
Q psy1301 319 VKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLK 397 (429)
Q Consensus 319 ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~ 397 (429)
|||||.|+++.+++||||++|+||++|+|||| +..++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus 308 Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~ 378 (408)
T 3abb_A 308 IKAGDAVLVSITLMNRDAKAYENPDIFDARRN---------ARHHVGFGHGIHQCLGQNLARAELEIALGGLFARIPGLR 378 (408)
T ss_dssp ECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSC---------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred ECCCCEEEeChHHhcCCcccCCCcccCCCCCC---------CCCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCccce
Confidence 99999999999999999999999999999996 24689999999999999999999999999999999 899
Q ss_pred eCCC-CCCcccccceeecCCceEEEEEeCC
Q psy1301 398 KLPG-QQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 398 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
+..+ .++++....+...+.+++|++++|.
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 408 (408)
T 3abb_A 379 LAVPLDEVPIKAGHDAQGPIELPVVWHHHH 408 (408)
T ss_dssp ESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred ecCCccccccccCcccCCcceeEEEeCCCC
Confidence 8743 2333322234456789999998874
No 46
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=4.3e-53 Score=405.57 Aligned_cols=360 Identities=12% Similarity=0.096 Sum_probs=243.4
Q ss_pred eeeeccccCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccC
Q psy1301 16 CTTAIGERISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDG 95 (429)
Q Consensus 16 ~~~~~~~~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~ 95 (429)
++.++.-.+...+|||.. .. +|+.++.++++ |||| ++++.++++|+|++++++++.++. .|++
T Consensus 9 ~iyr~~~~pl~~~PGp~~----------~~--~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~~-~f~~ 71 (411)
T 2jjn_A 9 CCARRTLTTIDEVPGMAD----------ET--ALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDTA-TFSS 71 (411)
T ss_dssp --------CCCSCCCSSC----------HH--HHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCTT-TEES
T ss_pred HhhhcccCCCCCCCCccc----------cc--ChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCcc-cccC
Confidence 344444556667777761 24 89999999975 9999 677788999999999999998754 6887
Q ss_pred CCCccccccc-cCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHH------------------
Q psy1301 96 RPNISRYNDL-FSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDS------------------ 155 (429)
Q Consensus 96 r~~~~~~~~~-~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~------------------ 155 (429)
++... +... ..+..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.
T Consensus 72 ~~~~~-~~~~~~~~~~~~~~~g~~~~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~ 146 (411)
T 2jjn_A 72 DPTRV-IEGASPTPGMIHEIDPPEHR-ALRKVVSSAFTPRTISDL---EPRIRDVTRSLLADAGESFDLVDVLAFPLPVT 146 (411)
T ss_dssp CGGGG-STTCCCCTTCGGGCCTTHHH-HHHHHHHHHSCHHHHHTT---HHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHH
T ss_pred ccccc-CCcccccccccccCCchHHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence 75432 2221 112211112233488 789999888877776666 33333333 33322
Q ss_pred HHHHHhcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhc-cCChh--------HHHHH----HHHHHHHHHHhcC
Q psy1301 156 LLERVYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFL-VNHPN--------VQAKI----QKEVDAITLRMSG 222 (429)
Q Consensus 156 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~--------~~~~~----~d~l~~ll~~~~~ 222 (429)
+... .++.+..... ++......+...... ....|...+.. ....+ ++++. .|+++.+++...+
T Consensus 147 vi~~-~fG~~~~~~~--~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~ 222 (411)
T 2jjn_A 147 IVAE-LLGLPPMDHE--QFGDWSGALVDIQMD-DPTDPALAERIADVLNPLTAYLKARCAERRADPGDDLISRLVLAEVD 222 (411)
T ss_dssp HHHH-HHTCCSCCCS--TTCCHHHHHHHSCCS-CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT
T ss_pred HHHH-HcCCCHHHHH--HHHHHHHHHHhccCc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccC
Confidence 1111 1333211111 111111111100000 00001100000 00000 11111 2567777765322
Q ss_pred ---CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcC
Q psy1301 223 ---VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRM 298 (429)
Q Consensus 223 ---~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl 298 (429)
.+++++..++.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||+
T Consensus 223 ~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 284 (411)
T 2jjn_A 223 GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------------RIPAIVEEVLRY 284 (411)
T ss_dssp TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHhhh
Confidence 378888888888876 9999999999999999999999999999965 789999999999
Q ss_pred cC-CCCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHH
Q psy1301 299 IA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNK 377 (429)
Q Consensus 299 ~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~ 377 (429)
+| ++.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||.+ ...++|||.|+|.|+|++
T Consensus 285 ~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~-------~~~~~pFG~G~r~C~G~~ 357 (411)
T 2jjn_A 285 RPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSG-------GAAQLSFGHGVHFCLGAP 357 (411)
T ss_dssp SCSSCEEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCS-------SCCCGGGCSSTTCCTTHH
T ss_pred CCCcCCcceEECCCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCC-------CCCccCCCCCCccCcCHH
Confidence 99 8889999999999999999999999999999999999999999999999853 136899999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc-eeeCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 378 MVQLISFTTLASLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 378 ~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
||++|++++++.|+++|+ +++.++..++.........+.+++|+++++.
T Consensus 358 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 407 (411)
T 2jjn_A 358 LARLENRVALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPVLAGSSP 407 (411)
T ss_dssp HHHHHHHHHHHHHHHHHSCCEECCSSCCCCBCCSSSSSBSCCEEECSCCT
T ss_pred HHHHHHHHHHHHHHHhCCcceECCCCceeccccccccCcceeEEEecCCC
Confidence 999999999999999996 9997433332122344556889999998874
No 47
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=1.4e-52 Score=403.30 Aligned_cols=336 Identities=11% Similarity=0.081 Sum_probs=242.7
Q ss_pred chHHHHHHHHHhcC-CeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccccccc--CCCCcccccchHHHHHHH
Q psy1301 48 VPYQAFKVISKTHG-SIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLF--SGNRENCKKLSQMSKAIR 124 (429)
Q Consensus 48 ~~~~~~~~~~~~yG-~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~--~~~~~~~~~~~~w~~~lR 124 (429)
+|+.++.++++++| ||+++..++ ++++|+||+++++++.+. ..|++++.... .... ++..........|+ ++|
T Consensus 39 dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~~~dg~~h~-~~R 114 (421)
T 3lxh_A 39 GFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVP-REAGEAYDMVPTKLDPPEHT-PYR 114 (421)
T ss_dssp CHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSS-HHHHHHCCCTTTTCCTTTHH-HHH
T ss_pred ChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCC-cccccccccCCccCCcHHHH-HHH
Confidence 89999999976655 899999876 489999999999999654 57877653221 1111 11111122333488 889
Q ss_pred HHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHhhhhhhcC
Q psy1301 125 AFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFSLEDIVGG 184 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 184 (429)
+.+.+.|+...+..+ .+.+.+.+ ++++.+.... .++.+..... .+......+...
T Consensus 115 ~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~--~~~~~~~~~~~~ 189 (421)
T 3lxh_A 115 KAIDKGLNLAEIRKL---EDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDAT--KLGLLANEMTRP 189 (421)
T ss_dssp HHHHHHHSHHHHHTT---HHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHHHHTCCGGGHH--HHHHHHHHHHSC
T ss_pred HHHhhhcCHHHHHHH---HHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHhcc
Confidence 999988888777776 44444444 4444432211 2333222222 333333333211
Q ss_pred ccchhhhHHHhhhhccCChhHHHHH----------------HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHH
Q psy1301 185 HTAISNFIMKTLGFLVNHPNVQAKI----------------QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISN 244 (429)
Q Consensus 185 ~~~~~~~~p~l~~~~~~~~~~~~~~----------------~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~ 244 (429)
.. .+|.. .. ....+..+.+ .|+++.+++...+ .+++++...+.++++ |+|||++
T Consensus 190 ~~----~~p~~-~~-~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~AG~eTta~ 263 (421)
T 3lxh_A 190 SG----NTPEE-QG-RSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEIDGKPMPDDRALGLVSLLLLGGLDTVVN 263 (421)
T ss_dssp CC----SSHHH-HH-HHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTSCBTTBCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc----CCCch-hH-HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHH
Confidence 10 01110 00 0000111112 2456666654322 278888888888776 9999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCC
Q psy1301 245 FIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDT 323 (429)
Q Consensus 245 tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt 323 (429)
+++|++++|++||++|+||++|++ |+++||+|+||++| + .++|.+.+|++++||.|||||
T Consensus 264 ~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l~G~~Ip~G~ 324 (421)
T 3lxh_A 264 FLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV-SDARYVVSDMEFHGTMLKEGD 324 (421)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-EEEEEECSCEEETTEEECTTC
T ss_pred HHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-CCceeeCCCeeECCEEECCCC
Confidence 999999999999999999999986 67999999999999 8 999999999999999999999
Q ss_pred EEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCC
Q psy1301 324 MIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQ 402 (429)
Q Consensus 324 ~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~ 402 (429)
.|+++.+++||||++|+||++|+|||| +..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.
T Consensus 325 ~V~~~~~~~~rdp~~~~dP~~F~PeR~---------~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~~ 395 (421)
T 3lxh_A 325 LILLPTALHGLDDRHHDDPMTVDLSRR---------DVTHSTFAQGPHRCAGMHLARLEVTVMLQEWLARIPEFRLKDRA 395 (421)
T ss_dssp EEEEETHHHHTCTTTSSSTTSCCTTCS---------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCCCCEECTTC
T ss_pred EEEEchhhhCCChhhCCCcCeeCCCCC---------CCCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence 999999999999999999999999994 35899999999999999999999999999999999 99998776
Q ss_pred CCcccccceeecCCceEEEEEeCCC
Q psy1301 403 QYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
+... ..++...+..++|+++||..
T Consensus 396 ~~~~-~~~~~~~~~~lpv~~~p~~~ 419 (421)
T 3lxh_A 396 VPIY-HSGIVAAVENIPLEWEPQRV 419 (421)
T ss_dssp CCEE-ECSSBCEEECCEEECCCC--
T ss_pred Ccee-ccccccCceeeeEEEecccc
Confidence 5443 23456667889999999864
No 48
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.1e-53 Score=412.65 Aligned_cols=344 Identities=14% Similarity=0.180 Sum_probs=237.5
Q ss_pred chHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccccCCCCcccccchHHHHHHHHHH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFSGNRENCKKLSQMSKAIRAFV 127 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~w~~~lR~~~ 127 (429)
+|+.++.++ ++|||||++..++ +++|++|+++++++.++. .|++++.......++++..........|+ ++|+++
T Consensus 54 ~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~l~~~dg~~h~-~~Rr~~ 128 (441)
T 3nc3_A 54 NPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMRGPVLAQMHGKEHS-AKRRIV 128 (441)
T ss_dssp CGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC--------------CCHHHH
T ss_pred ChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccCCCccccCCcHHHH-HHHHHH
Confidence 889999887 6899999998766 899999999999998875 48877654433333332211112233388 889999
Q ss_pred HhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHhhhhhhcCccc
Q psy1301 128 MENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFSLEDIVGGHTA 187 (429)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (429)
.+.|+...+..+ ++.+.+.+ ++++.+.... .++.+..... .+......+......
T Consensus 129 ~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~--~~~~~~~~~~~~~~~ 203 (441)
T 3nc3_A 129 VRSFIGDALDHL---SPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHE--KISEWHSGVADFITS 203 (441)
T ss_dssp HHHHHHTHHHHH---HHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHHHTTCCGGGHH--HHHHHHHHHHHHHHC
T ss_pred HhhcCHHHHHHH---HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHHHhccc
Confidence 998888888877 55555555 5554443211 1222211111 222221111100000
Q ss_pred hhhhHHHhhhhccCChhHHHHHH----------------HHHHHHHHHhc---CCcHHHHHHHHHHHhh-cchhHHHHHH
Q psy1301 188 ISNFIMKTLGFLVNHPNVQAKIQ----------------KEVDAITLRMS---GVHKLKVIFSLEDIVG-GHTAISNFIM 247 (429)
Q Consensus 188 ~~~~~p~l~~~~~~~~~~~~~~~----------------d~l~~ll~~~~---~~~~~~i~~~~~~l~~-G~dtts~tl~ 247 (429)
+ ...+.... ...+..+.+. |+++.+++... ..+++++...+..+++ |+|||+++++
T Consensus 204 ~-~~~~~~~~---~~~~~~~~l~~~~~~~i~~rr~~~~~Dll~~Ll~~~~~~~~ls~~el~~~~~~ll~AG~eTTa~~l~ 279 (441)
T 3nc3_A 204 I-SQSPEARA---HSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLA 279 (441)
T ss_dssp S-CCCHHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-cCChHHHH---HHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 0 00000000 0001112222 44555553322 1278888888888766 9999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEe
Q psy1301 248 KTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIF 326 (429)
Q Consensus 248 w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~ 326 (429)
|++++|++||++|+||++|+ +|+++||+|+||++| ++.++|.+.+|++++||.|||||.|+
T Consensus 280 ~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~Gt~V~ 341 (441)
T 3nc3_A 280 LMIYHLLNNPEQMNDVLADR------------------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVF 341 (441)
T ss_dssp HHHHHHHTSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEESSSCEECTTCEEE
T ss_pred HHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHhhhcCCcccCccEEECCCEEECCEEECCCCEEE
Confidence 99999999999999999974 589999999999999 88899999999999999999999999
Q ss_pred echhhhccCCCCCCCCCCCCCCCCCCCCCCc-cCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCC
Q psy1301 327 LNNYDLNMSPELWSEPENFQPERFINADGRI-VKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQY 404 (429)
Q Consensus 327 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~-~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~ 404 (429)
++.+++||||++|+||++|+||||+.+.... ..+..++|||.|+|.|+|++||++|++++++.|+++| ++++.++. .
T Consensus 342 ~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~ 420 (441)
T 3nc3_A 342 CMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLEEDF-C 420 (441)
T ss_dssp EEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEECTTC-C
T ss_pred echHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEECCCC-c
Confidence 9999999999999999999999997653221 1256899999999999999999999999999999999 99998653 2
Q ss_pred cccccceeecCCceEEEEEe
Q psy1301 405 KVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~ 424 (429)
......+...+..++|+++|
T Consensus 421 ~~~~~~~~~~~~~lpv~~~~ 440 (441)
T 3nc3_A 421 YAESGLYTRGPVSLLVAFDG 440 (441)
T ss_dssp CCEECSSBCEESCCEEECC-
T ss_pred ccccCccccCcceeEEEEec
Confidence 22222345557889998864
No 49
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=6.4e-52 Score=397.14 Aligned_cols=358 Identities=16% Similarity=0.224 Sum_probs=247.5
Q ss_pred cCCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCccc
Q psy1301 23 RISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNISR 101 (429)
Q Consensus 23 ~~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~ 101 (429)
++...-+||.. |+- ..+.. +|+.++.+|+ +|||||++++ |+.++|+|+||+++++++.++ .|++++....
T Consensus 4 ~~~~~~~g~~~-~~~---~~~~~--~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 74 (413)
T 2z36_A 4 NVADELAGLEL-PVE---RGCPF--APPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDG 74 (413)
T ss_dssp ------CCCEE-CCC---CCBTT--BCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTT
T ss_pred cHHHHhccccC-CCC---ccccc--CchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccC
Confidence 34444566653 442 33555 8999999997 8899999998 889999999999999999874 6777653321
Q ss_pred cc------ccc----CCCC-cccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccc
Q psy1301 102 YN------DLF----SGNR-ENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKM 169 (429)
Q Consensus 102 ~~------~~~----~~~~-~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~ 169 (429)
+. .+. ++.. ........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... .....++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~---~~~~~d~ 147 (413)
T 2z36_A 75 FPLFTLDAATLQQLRSQPPLMLGMDGAEHS-AARRPVIGEFTVKRLAAL---RPRIQDIVDHFIDDMLAT---DQRPVDL 147 (413)
T ss_dssp CCCSSCCHHHHHHHTTSCCCGGGCCHHHHH-HHHHHHHGGGSHHHHHHH---HHHHHHHHHHHHHHHTTC---SCSSEEH
T ss_pred ccccccccccccccccccccccccCchHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHHHh---cCCCccH
Confidence 11 111 1221 1112223387 889999999988888887 66666666 777666421 0000000
Q ss_pred ----cHHHHHHhhhhhhcCcc--chhhhHHHhhhhccCC--hh---------------HHHHH----HHHHHHHHHHhc-
Q psy1301 170 ----DLNTALFSLEDIVGGHT--AISNFIMKTLGFLVNH--PN---------------VQAKI----QKEVDAITLRMS- 221 (429)
Q Consensus 170 ----~~~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~--~~---------------~~~~~----~d~l~~ll~~~~- 221 (429)
...-..+.+..+ .|.. ....+..+....+... ++ ++++. .|+++.+++...
T Consensus 148 ~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~ 226 (413)
T 2z36_A 148 VQALSLPVPSLVICEL-LGVPYTDHDFFQSRTTMMVSRTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQRQ 226 (413)
T ss_dssp HHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcC
Confidence 000001111111 1110 0001111110000000 00 11111 256777765422
Q ss_pred --CCcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcC
Q psy1301 222 --GVHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRM 298 (429)
Q Consensus 222 --~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl 298 (429)
..+++++...+.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||+
T Consensus 227 ~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl 288 (413)
T 2z36_A 227 EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANPG------------------RTPMAVEELLRY 288 (413)
T ss_dssp HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------HHHHHHHHHHHh
Confidence 2378888888888876 9999999999999999999999999999853 789999999999
Q ss_pred cC-CC-CCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccH
Q psy1301 299 IA-SP-IVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGN 376 (429)
Q Consensus 299 ~~-~~-~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~ 376 (429)
+| ++ .++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|+
T Consensus 289 ~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~ 359 (413)
T 2z36_A 289 FTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGA---------RHHLAFGFGPHQCLGQ 359 (413)
T ss_dssp HCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCC---------CCCCTTCCSTTSCTTH
T ss_pred CCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCC---------CCCCCCCCCCccCccH
Confidence 99 88 5999999999999999999999999999999999999999999999984 3589999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc-ceeeCCC-CCCcccccceeecCCceEEEEEe
Q psy1301 377 KMVQLISFTTLASLFQSY-DLKKLPG-QQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 377 ~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
+||++|++++++.|+++| ++++.++ .++++....+...+..++|++..
T Consensus 360 ~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~~ 409 (413)
T 2z36_A 360 NLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWHH 409 (413)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEeec
Confidence 999999999999999999 5898765 23333222344457788888754
No 50
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=4.2e-52 Score=397.96 Aligned_cols=341 Identities=11% Similarity=0.157 Sum_probs=245.2
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCC--ccEEEEcChHHHHHHHhhcCccccCCCCccc----cccccC--CCCcccccchH
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGV--VPAIVVNGLENIKEVLFVKATDFDGRPNISR----YNDLFS--GNRENCKKLSQ 118 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~--~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~----~~~~~~--~~~~~~~~~~~ 118 (429)
++||.++.+++ +||||+++++++ .++++|++|+++++++.++ .|++++.... +..+.+ +..........
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 103 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPD 103 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTH
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCchH
Confidence 46779999997 899999999865 7899999999999999874 6766543321 112211 22111223334
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcc---cccHHHHHHhhhhhhcCcc--chhhhH
Q psy1301 119 MSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKA---KMDLNTALFSLEDIVGGHT--AISNFI 192 (429)
Q Consensus 119 w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (429)
|+ ++|+.+.+.|+...+..+ ++.+.+.+ ++++.+... +..-+ .+...-..+.+..+ .|.. ....+.
T Consensus 104 h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---g~~~dl~~~~~~~~~~~vi~~l-~G~~~~~~~~~~ 175 (411)
T 2dkk_A 104 HN-RLRRAVAGAFTVGATKRL---RPRAQEILDGLVDGILAE---GPPADLVERVLEPFPIAVVSEV-MGVPAADRERVH 175 (411)
T ss_dssp HH-HHHHHHGGGSSHHHHHHH---HHHHHHHHHHHHHHHHHH---CSCEEHHHHTTTHHHHHHHHHH-HTCCSSHHHHHH
T ss_pred HH-HHHHHhhHhhCHHHHHHH---HHHHHHHHHHHHHHHHhc---CCCeehHHHHHHHHHHHHHHHH-hCCCHHHHHHHH
Confidence 88 889999999998888888 66677767 777777542 10000 00000011112121 1111 001111
Q ss_pred HHhhhhcc---CChh---HHHHH----------------HHHHHHHHHHh--cCCcHHHHHHHHHHHhh-cchhHHHHHH
Q psy1301 193 MKTLGFLV---NHPN---VQAKI----------------QKEVDAITLRM--SGVHKLKVIFSLEDIVG-GHTAISNFIM 247 (429)
Q Consensus 193 p~l~~~~~---~~~~---~~~~~----------------~d~l~~ll~~~--~~~~~~~i~~~~~~l~~-G~dtts~tl~ 247 (429)
.+....+. ..++ ..+.+ .|+++.+++.. ...+++++..++.++++ | |||+++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l~~AG-eTta~~l~ 254 (411)
T 2dkk_A 176 SWTRQIISTSGGAEAAERAKRGLYGWITETVRARAGSEGGDVYSMLGAAVGRGEVGETEAVGLAGPLQIGG-EAVTHNVG 254 (411)
T ss_dssp HHHGGGCSSCSCSHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHHHHTTSSCTTSHHHHHHHHHHTH-HHHHHHHH
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCCHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 11100000 0111 11111 25677777541 12377788888887766 9 99999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-C-CccccCCCceecCEEeCCCCE
Q psy1301 248 KTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-I-VPHVATQNSSIGGFEVKKDTM 324 (429)
Q Consensus 248 w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~-~~R~~~~d~~l~g~~ipkGt~ 324 (429)
|++++|++||++|+||++|++ |+++||+|+||++| ++ . ++|.+.+|++++||.|||||.
T Consensus 255 ~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~ 316 (411)
T 2dkk_A 255 QMLYLLLTRRELMARMRERPG------------------ARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEP 316 (411)
T ss_dssp HHHHHHHHSHHHHHHHHHCTT------------------CCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCE
T ss_pred HHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCCCE
Confidence 999999999999999999964 67999999999999 88 7 899999999999999999999
Q ss_pred EeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC-C
Q psy1301 325 IFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG-Q 402 (429)
Q Consensus 325 v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~ 402 (429)
|.++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .
T Consensus 317 V~~~~~~~~rdp~~f~dp~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~ 387 (411)
T 2dkk_A 317 VYVSYLAANRDPDVFPDPDRIDLDRDP---------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAE 387 (411)
T ss_dssp EEECHHHHTTCTTTSSSTTSCCCSCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGG
T ss_pred EEeChhhhcCChhhCCCCCCCCCCCCC---------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCcc
Confidence 999999999999999999999999995 3689999999999999999999999999999999 9999865 2
Q ss_pred CCcccccceeecCCceEEEEEeCC
Q psy1301 403 QYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
++++....+...+.+++|++++|+
T Consensus 388 ~~~~~~~~~~~~~~~lpv~~~~R~ 411 (411)
T 2dkk_A 388 QVAWRRKTMIRGPRTLPCTWHHHH 411 (411)
T ss_dssp GCCBCCSSSBCCBSCCEEECCCCC
T ss_pred ccccccCcccCCcceeEEEeccCC
Confidence 333322344556889999999885
No 51
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=1.1e-51 Score=395.88 Aligned_cols=343 Identities=13% Similarity=0.159 Sum_probs=241.2
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCc-cc---cccccCCCCcccccc
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNI-SR---YNDLFSGNRENCKKL 116 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~-~~---~~~~~~~~~~~~~~~ 116 (429)
.+.. +|+.++.+| ++|||||++++ |+.++|+|+||+++++++.++ .|++++.. .. +.....+........
T Consensus 34 ~~~~--~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 108 (417)
T 2y5n_A 34 VHGL--TLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDP 108 (417)
T ss_dssp SSSC--CCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCT
T ss_pred hhcc--CchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCc
Confidence 3445 899999999 89999999997 889999999999999999875 46665432 21 111112221111223
Q ss_pred hHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-hcCCCcccccHHHHHHhhhhhhcCcc--chhhhH
Q psy1301 117 SQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-YNNRDKAKMDLNTALFSLEDIVGGHT--AISNFI 192 (429)
Q Consensus 117 ~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (429)
..|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.... .++. ...+...-..+.+..+ .|.. ....+.
T Consensus 109 ~~h~-~~R~~l~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~vdl-~~~~~~~~~~~vi~~~-~G~~~~~~~~~~ 182 (417)
T 2y5n_A 109 PEHS-RLRRLVVKAFTARRAESL---RPRAREIAHELVDQMAATGQPADL-VAMFARQLPVRVICEL-LGVPSADHDRFT 182 (417)
T ss_dssp THHH-HHHHHHHHHSCHHHHHHT---HHHHHHHHHHHHHHHHHHCSSEEH-HHHTTTTHHHHHHHHH-HTCCGGGHHHHH
T ss_pred hHHH-HHHHHHhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhCCCCeeH-HHHHHHHhHHHHHHHH-cCCCHHHHHHHH
Confidence 3488 889999998888888777 66666666 7777665310 0000 0000000001111111 1110 000111
Q ss_pred HHhhhhcc---CC-h---hHHHHH----------------HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHH
Q psy1301 193 MKTLGFLV---NH-P---NVQAKI----------------QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNF 245 (429)
Q Consensus 193 p~l~~~~~---~~-~---~~~~~~----------------~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~t 245 (429)
.+....+. .. + +..+.+ .|+++.+++...+ .+++++..++.++++ |+|||+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTta~~ 262 (417)
T 2y5n_A 183 RWSGAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQ 262 (417)
T ss_dssp HHHHTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHHHhHHHHHHH
Confidence 11100000 00 0 111111 2567777764322 378888888888876 99999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC--CCccccCCCceecCEEeCCC
Q psy1301 246 IMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP--IVPHVATQNSSIGGFEVKKD 322 (429)
Q Consensus 246 l~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~--~~~R~~~~d~~l~g~~ipkG 322 (429)
++|++++|++||++|+||++|++ |++|||+|+||++| ++ .++|.+.+|++++||.||||
T Consensus 263 l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~G 324 (417)
T 2y5n_A 263 IADFVYLLMTRPELRRQLLDRPE------------------LIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAG 324 (417)
T ss_dssp HHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHCCCBSSCCSCEEESSCEEETTEEECTT
T ss_pred HHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCCccccccceEeCCCEEECCEEECCC
Confidence 99999999999999999999853 78999999999999 88 69999999999999999999
Q ss_pred CEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC
Q psy1301 323 TMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG 401 (429)
Q Consensus 323 t~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 401 (429)
|.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 325 t~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~ 395 (417)
T 2y5n_A 325 EPVLASTGAANRDQAQFPDADRIDVDRTP---------NQHLGFGHGVHHCLGAPLARVELQVALEVLLQRLPGIRLGIP 395 (417)
T ss_dssp CEEEECHHHHTTCTTTSTTTTSCCTTCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSC
T ss_pred CEEEeChhhhCCCcccCCCccccCCCCCC---------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCC
Confidence 99999999999999999999999999983 3689999999999999999999999999999999 5998764
Q ss_pred -CCCcccccceeecCCceEEEE
Q psy1301 402 -QQYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 402 -~~~~~~~~~~~~~~~~~~~~~ 422 (429)
.++++....+...+..++|++
T Consensus 396 ~~~~~~~~~~~~~~~~~lpv~~ 417 (417)
T 2y5n_A 396 ETQLRWSEGMLLRGPLELPVVW 417 (417)
T ss_dssp GGGCCBCCCSSBCCBSCCEEEC
T ss_pred CccceeccCcccCCcceeEEeC
Confidence 233332223445577887763
No 52
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=2e-51 Score=392.10 Aligned_cols=333 Identities=14% Similarity=0.231 Sum_probs=238.2
Q ss_pred chHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCccc-cccccCCCC--cccccc------h
Q psy1301 48 VPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNISR-YNDLFSGNR--ENCKKL------S 117 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~-~~~~~~~~~--~~~~~~------~ 117 (429)
+|+.++.+| ++|||||++++ ++.++|+|+||+++++++.++ .|++++.... +.....+.. ...... .
T Consensus 27 ~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 103 (404)
T 2xbk_A 27 KLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESGRR 103 (404)
T ss_dssp BCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHHH
T ss_pred CccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCCCc
Confidence 899999999 89999999997 889999999999999999875 4766544321 222212221 112233 4
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHH-----HHhhhhhhcCcc--chh
Q psy1301 118 QMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTA-----LFSLEDIVGGHT--AIS 189 (429)
Q Consensus 118 ~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~ 189 (429)
.|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +. ..++. ..+ .+.+..+ .|.. ...
T Consensus 104 ~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~---g~-~~d~~-~~~~~~~~~~vi~~~-~G~~~~~~~ 173 (404)
T 2xbk_A 104 QHA-ETRRLLTPLFSARRVLEM---QPKVEEAADTLLDAFIAQ---GP-PGDLH-GELTVPFALTVLCEV-IGVPPQRRA 173 (404)
T ss_dssp HHH-HHHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHHHHHT---CS-SEEHH-HHTHHHHHHHHHHHH-HTCCGGGHH
T ss_pred hHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhc---CC-CeeHH-HHHHHHHHHHHHHHH-hCCCHHHHH
Confidence 588 889999999988888887 66666666 777766531 10 00110 001 1111111 1111 000
Q ss_pred hhHHHhhhhcc-----CChhHHHHHH----------------HHHHHHHHHhcCCcHHHHHHHHHHHhh-cchhHHHHHH
Q psy1301 190 NFIMKTLGFLV-----NHPNVQAKIQ----------------KEVDAITLRMSGVHKLKVIFSLEDIVG-GHTAISNFIM 247 (429)
Q Consensus 190 ~~~p~l~~~~~-----~~~~~~~~~~----------------d~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dtts~tl~ 247 (429)
.+..+....+. ...+..+.+. |+++.+ +. ...+++++...+.++++ |+|||+++++
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~l-~~-~~ls~~ei~~~~~~l~~AG~dTta~~l~ 251 (404)
T 2xbk_A 174 ELTTLLAGIAKLDDREGAVRAQDDLFGYVAGLVEHKRAEPGPDIISRL-ND-GELTEDRVAHLAMGLLFAGLDSVASIMD 251 (404)
T ss_dssp HHHHHHHHHTBSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHH-HS-SSCCHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHh-hc-CCCCHHHHHHHHHHHHHhchHHHHHHHH
Confidence 11111100000 0011122222 334433 11 12478888888888876 9999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC--CCccccCCCceecCEEeCCCCE
Q psy1301 248 KTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP--IVPHVATQNSSIGGFEVKKDTM 324 (429)
Q Consensus 248 w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~--~~~R~~~~d~~l~g~~ipkGt~ 324 (429)
|++++|++||++|+||++|++ |++|||+|+||++| ++ .++|.+.+|++++||.|||||.
T Consensus 252 ~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~ 313 (404)
T 2xbk_A 252 NGVVLLAAHPDQRAAALADPD------------------VMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDL 313 (404)
T ss_dssp HHHHHHHHCHHHHHHHHHCHH------------------HHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCE
T ss_pred HHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhCCCccccccceeECCCeeECCEEECCCCE
Confidence 999999999999999999964 68999999999999 88 6999999999999999999999
Q ss_pred EeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCC-
Q psy1301 325 IFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQ- 402 (429)
Q Consensus 325 v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~- 402 (429)
|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++.
T Consensus 314 V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~ 384 (404)
T 2xbk_A 314 VLFDLGLPNFDERAFTGPEEFDAARTP---------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVE 384 (404)
T ss_dssp EECBTHHHHTCTTTSSSTTSCCTTCSS---------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGG
T ss_pred EEeChHHhcCChhhCCCccccCCCCCC---------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCC
Confidence 999999999999999999999999983 3689999999999999999999999999999999 79997642
Q ss_pred CCcccccceeecCCceEEEE
Q psy1301 403 QYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~ 422 (429)
++++....+...+.+++|++
T Consensus 385 ~~~~~~~~~~~~~~~lpv~~ 404 (404)
T 2xbk_A 385 QLRLKEGQLSGGFAELRVVW 404 (404)
T ss_dssp GCCBCSSBTTCCBSCCEEEC
T ss_pred cceeccCcccCCcceeeeeC
Confidence 33332223344577887763
No 53
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=2.4e-52 Score=401.59 Aligned_cols=340 Identities=11% Similarity=0.125 Sum_probs=237.6
Q ss_pred chHHHHHHHHHhcCCeeEEeeC--CccEEEEcChHHHHHHHhhcCccccCCCCc--------cc-cc------cccCCCC
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLG--VVPAIVVNGLENIKEVLFVKATDFDGRPNI--------SR-YN------DLFSGNR 110 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg--~~~~vvv~~p~~i~~il~~~~~~f~~r~~~--------~~-~~------~~~~~~~ 110 (429)
+|+.++.+++ +|||||++++| +.++|+|+||+++++++.++ .|++++.. .. .. ..+++..
T Consensus 21 ~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (425)
T 2z3t_A 21 DPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENW 97 (425)
T ss_dssp CCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTC
T ss_pred ChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccccc
Confidence 8999999986 59999999998 78899999999999999875 68776531 11 10 0011121
Q ss_pred cccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCccccc
Q psy1301 111 ENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMD 170 (429)
Q Consensus 111 ~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~ 170 (429)
........|+ ++|+.+.+.|+...+..+ ++.+.+.+ ++++.+.... .++.+.....
T Consensus 98 l~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~~G~~~~~~~ 173 (425)
T 2z3t_A 98 LVFLDPPHHT-ELRSLLTTEFSPSIVTGL---RPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISALLGIPEEDHT 173 (425)
T ss_dssp GGGCCHHHHH-HHHHHHHGGGSHHHHHHH---HHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHHHTCCGGGHH
T ss_pred cccCCchHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 1112223387 889999998888888777 55555555 5555553210 1222211111
Q ss_pred HHHHHHhhhhhhcCccchhhhHHHh-hhhc-cCChhH----HH--------HHHHHHHHHHHHhcC---CcHHHHHHHHH
Q psy1301 171 LNTALFSLEDIVGGHTAISNFIMKT-LGFL-VNHPNV----QA--------KIQKEVDAITLRMSG---VHKLKVIFSLE 233 (429)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~l-~~~~-~~~~~~----~~--------~~~d~l~~ll~~~~~---~~~~~i~~~~~ 233 (429)
.+......+......+ . +++. .... ....++ .+ .-.|+++.+++...+ .+++++...+.
T Consensus 174 --~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~el~~~~~ 249 (425)
T 2z3t_A 174 --WLRANAVALQEASTTR-A-RDGRGYARAEAASQEFTRYFRREVDRRGGDDRDDLLTLLVRARDTGSPLSVDGIVGTCV 249 (425)
T ss_dssp --HHHHHHHHHHTTCTTC-C-C---HHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred --HHHHHHHHHHhhcccc-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHH
Confidence 1221111111100000 0 0000 0000 000000 00 013677888765432 37888888888
Q ss_pred HHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCC
Q psy1301 234 DIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQN 311 (429)
Q Consensus 234 ~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d 311 (429)
++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||++| ++.++|.+.+|
T Consensus 250 ~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d 311 (425)
T 2z3t_A 250 HLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPE------------------STPAAVEELMRYDPPVQAVTRWAYED 311 (425)
T ss_dssp HHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCEEEEEESSC
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhChH------------------hHHHHHHHHHHhCCcccCcceEeCCC
Confidence 8876 9999999999999999999999999999853 78999999999999 88899999999
Q ss_pred ceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHH
Q psy1301 312 SSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLF 391 (429)
Q Consensus 312 ~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll 391 (429)
++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+
T Consensus 312 ~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll 382 (425)
T 2z3t_A 312 IRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAA---------ERQVGFGLGIHYCLGATLARAEAEIGLRALL 382 (425)
T ss_dssp EEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCS---------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHH
T ss_pred eeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999995 3689999999999999999999999999999
Q ss_pred Hhc-ceeeCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 392 QSY-DLKKLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 392 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
++| +++ +++.+..+....+...+.+++|++.+.+
T Consensus 383 ~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~ 417 (425)
T 2z3t_A 383 DGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAA 417 (425)
T ss_dssp HHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC---
T ss_pred HhCCcCc-cCCCccccccccccCCcceeeEEecchh
Confidence 999 899 7653212222233455778888887764
No 54
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=1.4e-52 Score=401.93 Aligned_cols=341 Identities=10% Similarity=0.153 Sum_probs=240.7
Q ss_pred CchHHHHHHHHHhcCCee-----EEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcc-ccc--cc---cCCCCccccc
Q psy1301 47 EVPYQAFKVISKTHGSIF-----RLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNIS-RYN--DL---FSGNRENCKK 115 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if-----~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~-~~~--~~---~~~~~~~~~~ 115 (429)
.+|+.++.+|+ +||||| ++++ .++|+|+||+++++++.++ ..|++++... .+. .+ .++.......
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence 48999999984 799999 8876 6799999999999999986 5788775442 121 22 1122111222
Q ss_pred chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHHhhhhhhcCcc--chhhhH
Q psy1301 116 LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHT--AISNFI 192 (429)
Q Consensus 116 ~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (429)
...|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.....++. ...+...-..+.+..+ .|.. ....+.
T Consensus 101 g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~vdl-~~~~~~~~~~~vi~~~-~G~~~~~~~~~~ 174 (414)
T 2uuq_A 101 PPVHT-EFRKLVSRGFTPRQVETV---EPTVRKFVVERLEKLRANGGGDI-VTELFKPLPSMVVAHY-LGVPEEDWTQFD 174 (414)
T ss_dssp TTHHH-HHHHHHHTTSSHHHHHHH---HHHHHHHHHHHHHHHHHTTEEEH-HHHTTTHHHHHHHHHH-TTCCGGGHHHHH
T ss_pred chhHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhcCCccH-HHHHHHHhHHHHHHHH-hCCCHHHHHHHH
Confidence 33488 889999998888888887 66666666 77776654210000 0000000011111111 1110 000000
Q ss_pred HH---hhh--hc-cC---ChhHHHHH----------------HHHHHHHHHHhc--C---CcHHHHHHHHHHHhh-cchh
Q psy1301 193 MK---TLG--FL-VN---HPNVQAKI----------------QKEVDAITLRMS--G---VHKLKVIFSLEDIVG-GHTA 241 (429)
Q Consensus 193 p~---l~~--~~-~~---~~~~~~~~----------------~d~l~~ll~~~~--~---~~~~~i~~~~~~l~~-G~dt 241 (429)
.+ +.. ++ +. ..+..+++ .|+++.+++... + .+++++..++.++++ |+||
T Consensus 175 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~~ls~~ei~~~~~~l~~AG~eT 254 (414)
T 2uuq_A 175 GWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAGTLSILAFTFTMVTGGNDT 254 (414)
T ss_dssp HHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHTTTTCTTCHHHHHHHHHHHHHHHHHHSHH
T ss_pred HHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccccCCCCCCHHHHHHHHHHHHHhhHHH
Confidence 00 000 01 11 11111111 256777776543 1 277888888888876 9999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeC
Q psy1301 242 ISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVK 320 (429)
Q Consensus 242 ts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ip 320 (429)
|+++++|++++|++||++|+||++|+ +|++|||+|+||++| ++.++|.+.+|++++||.||
T Consensus 255 t~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip 316 (414)
T 2uuq_A 255 VTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIP 316 (414)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBCCEEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCCcCCcceEECCCEEECCEEEC
Confidence 99999999999999999999999985 389999999999999 88899999999999999999
Q ss_pred CCCEEeechhhhccCCCCC-CCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceee
Q psy1301 321 KDTMIFLNNYDLNMSPELW-SEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKK 398 (429)
Q Consensus 321 kGt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~ 398 (429)
|||.|+++.+++||||++| +||++|+||||. ..++|||.|+|.|+|++||.+|++++++.|+++| ++++
T Consensus 317 ~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l 387 (414)
T 2uuq_A 317 AGRRVLLLYGSANRDERQYGPDAAELDVTRCP---------RNILTFSHGAHHCLGAAAARMQCRVALTELLARCPDFEV 387 (414)
T ss_dssp TTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC---------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEeChhhhCCCHHHhCCCchhcCCCCCC---------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEE
Confidence 9999999999999999999 999999999985 3689999999999999999999999999999999 6999
Q ss_pred CCCCCCcccccceeecCCceEEEEEeC
Q psy1301 399 LPGQQYKVPIGDLALPYNTFRFNFSPR 425 (429)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~r 425 (429)
.++ ++++.......++.+++|+++||
T Consensus 388 ~~~-~~~~~~~~~~~~~~~lpv~~~~r 413 (414)
T 2uuq_A 388 AES-RIVWSGGSYVRRPLSVPFRVTSS 413 (414)
T ss_dssp CGG-GCEECCCSSBCCEEECEEEEC--
T ss_pred CCC-CccccccccccCcceeEEEecCC
Confidence 732 33332223445678999999887
No 55
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=1.1e-52 Score=402.25 Aligned_cols=332 Identities=15% Similarity=0.147 Sum_probs=239.1
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCC--ccEEEEcChHHHHHHHhhcCccccCCCCcccccc---cc-C-CCCcccccchHH
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGV--VPAIVVNGLENIKEVLFVKATDFDGRPNISRYND---LF-S-GNRENCKKLSQM 119 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~--~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~---~~-~-~~~~~~~~~~~w 119 (429)
.+|+..+.++++ ||||+++...| .++++|++++++++++++. ..|++++....... .. . +..........|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHH
Confidence 489999999976 99999997444 7899999999999999665 36877654332111 10 0 111111122338
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHhhh
Q psy1301 120 SKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFSLE 179 (429)
Q Consensus 120 ~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~ 179 (429)
+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+.... .++.+.+... .+.....
T Consensus 115 ~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~--~~~~~~~ 188 (415)
T 3mgx_A 115 R-KLRKLVGPLLSRAAARKL---AERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCEILGVPAEDED--MLIDLTN 188 (415)
T ss_dssp H-HHHHHHGGGSSHHHHHHS---HHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHHHHTCCGGGHH--HHHHHHH
T ss_pred H-HHHHHhHhhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHH--HHHHHHH
Confidence 8 889999998888777776 44333333 3333322110 2333222222 3333333
Q ss_pred hhhcCccchhhhHHHhhhhccCC-hhHHHHH----------------HHHHHHHHHHhcCCcHHHHHHHHHHHhh-cchh
Q psy1301 180 DIVGGHTAISNFIMKTLGFLVNH-PNVQAKI----------------QKEVDAITLRMSGVHKLKVIFSLEDIVG-GHTA 241 (429)
Q Consensus 180 ~~~~~~~~~~~~~p~l~~~~~~~-~~~~~~~----------------~d~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dt 241 (429)
.+...... ... +.. .+..+.+ .|+++.+++.. ..+++++...+.++++ |+||
T Consensus 189 ~~~~~~~~--~~~-------~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~-~ls~~el~~~~~~ll~AG~eT 258 (415)
T 3mgx_A 189 HAFGGEDE--LFD-------GMTPRQAHTEILVYFDELITARRKEPGDDLVSTLVTDD-DLTIDDVLLNCDNVLIGGNET 258 (415)
T ss_dssp HHTSCCC-------------CCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCT-TSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHcccCc--ccc-------hHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhCC-CCCHHHHHHHHHHHHHhhhHH
Confidence 33211100 000 000 0111112 24566666543 4478888888888766 9999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeC
Q psy1301 242 ISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVK 320 (429)
Q Consensus 242 ts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ip 320 (429)
|+++++|++++|++||++|+||++|+ +|+++||+|+||++| ++.++|.+.+|++++||.||
T Consensus 259 Ta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip 320 (415)
T 3mgx_A 259 TRHAITGAVHALATVPGLLTALRDGS------------------ADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLP 320 (415)
T ss_dssp HHHHHHHHHHHHHHSTTHHHHHHHTS------------------SCHHHHHHHHHHHHCCBCEEEEEESSCEEETTEEEC
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhcCcccccceecCCCeeECCEEEC
Confidence 99999999999999999999999985 799999999999999 88899999999999999999
Q ss_pred CCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeC
Q psy1301 321 KDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKL 399 (429)
Q Consensus 321 kGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~ 399 (429)
||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus 321 ~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~ 391 (415)
T 3mgx_A 321 SGTPVVAWLPAANRDPAEFDDPDTFLPGRKP---------NRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVDLE 391 (415)
T ss_dssp TTCEEEEEHHHHTTCTTTSSSTTSCCTTCCS---------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEEEC
T ss_pred CCCEEEechHHhCCChhhcCCccccCCCCCC---------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCCccC
Confidence 9999999999999999999999999999973 3689999999999999999999999999999999 89987
Q ss_pred CCCCCcccccceeecCCceEEEEEeC
Q psy1301 400 PGQQYKVPIGDLALPYNTFRFNFSPR 425 (429)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~r 425 (429)
++.. .....+...+..++|++++|
T Consensus 392 ~~~~--~~~~~~~~~~~~lpv~~~~R 415 (415)
T 3mgx_A 392 REPA--WLRAIVVQGYRELPVRFTGR 415 (415)
T ss_dssp SCCE--ECSCSSBCCEEECEEEEEEC
T ss_pred CCcc--cccCCcccCceeeeEEEecC
Confidence 4322 22233455578999999987
No 56
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=6.3e-52 Score=397.05 Aligned_cols=344 Identities=14% Similarity=0.136 Sum_probs=242.1
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCC--ccc---cc---ccc---CCCC
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPN--ISR---YN---DLF---SGNR 110 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~--~~~---~~---~~~---~~~~ 110 (429)
.+.. +|+..+.+| ++|||||++++++.++|+|+||+++++++.++. |++++. +.. .. .+. .+..
T Consensus 12 ~~~~--~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (408)
T 1odo_A 12 PTGA--DHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVEN 86 (408)
T ss_dssp TTCT--THHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCS
T ss_pred cccC--ChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccc
Confidence 4555 899999999 999999999999999999999999999998763 444331 110 00 010 1121
Q ss_pred cccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCccccc----HHHHHHhhhhhhcCc
Q psy1301 111 ENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMD----LNTALFSLEDIVGGH 185 (429)
Q Consensus 111 ~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 185 (429)
........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+..... +. ..++. ..-..+.+..+ .|.
T Consensus 87 l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~-~~-~~d~~~~~~~~~~~~vi~~~-~G~ 159 (408)
T 1odo_A 87 MFTAYGPNHR-KLRRLVAPAFSARRVDAM---RPAVEAMVTGLVDRLAELPA-GE-PVDLRQELAYPLPIAVIGHL-MGV 159 (408)
T ss_dssp GGGCCHHHHH-HHHHTTGGGGSHHHHHHH---HHHHHHHHHHHHHHHHHSCT-TS-CEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred ccccCChHHH-HHHHHhhhhcCHHHHHHH---HHHHHHHHHHHHHHHHhhcC-CC-CcchHHHHhhhhHHHHHHHH-hCC
Confidence 1111223487 789999998888888888 66677777 77777753210 00 00000 00001111111 111
Q ss_pred c--chhhhHHHhhhhcc---CChh---------------HHHHH----HHHHHHHHHHhcC------CcHHHHHHHHHHH
Q psy1301 186 T--AISNFIMKTLGFLV---NHPN---------------VQAKI----QKEVDAITLRMSG------VHKLKVIFSLEDI 235 (429)
Q Consensus 186 ~--~~~~~~p~l~~~~~---~~~~---------------~~~~~----~d~l~~ll~~~~~------~~~~~i~~~~~~l 235 (429)
. ....+..+....+. ...+ ++++. .|+++.+++...+ .+++++..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~ 239 (408)
T 1odo_A 160 PQDRRDGFRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLM 239 (408)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-----CCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccccccCCCCHHHHHHHHHHH
Confidence 1 00001111100000 0000 11111 2577778765432 3788888888888
Q ss_pred hh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCc
Q psy1301 236 VG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNS 312 (429)
Q Consensus 236 ~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~ 312 (429)
++ |+|||+++++|++++|++||++|+||++|+ +|++|||+|+||++| ++. ++|.+.+|+
T Consensus 240 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~ 301 (408)
T 1odo_A 240 ISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE------------------VTWADVVEETLRHEPAVKHLPLRYAVTDI 301 (408)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS------------------SCHHHHHHHHHHHSCSBSCEEEEEESSCE
T ss_pred HHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhhCCCccCCcceEeCCCe
Confidence 76 999999999999999999999999999973 368999999999999 886 999999999
Q ss_pred eec-CEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHH
Q psy1301 313 SIG-GFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLF 391 (429)
Q Consensus 313 ~l~-g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll 391 (429)
+++ ||.|||||.|+++.+++||||++|+||++|+|||+ +..++|||.|+|.|+|++||++|++++++.|+
T Consensus 302 ~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~---------~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll 372 (408)
T 1odo_A 302 ALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRT---------VKEHLAFGHGVHFCLGAPLARMEVTLALESLF 372 (408)
T ss_dssp ECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCS---------CCCCCTTCSSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred EcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCC---------CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999999999999994 24799999999999999999999999999999
Q ss_pred Hhc-ceeeCCC-CCCcccccceeecCCceEEEEEe
Q psy1301 392 QSY-DLKKLPG-QQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 392 ~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
++| ++++..+ .++++....+..++.+++|+++|
T Consensus 373 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~ 407 (408)
T 1odo_A 373 GRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA 407 (408)
T ss_dssp HHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred HhCCcceecCCccccccccCccccCcccceEEecC
Confidence 999 7999743 33333222344457899998865
No 57
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=1.2e-51 Score=393.43 Aligned_cols=334 Identities=15% Similarity=0.128 Sum_probs=238.6
Q ss_pred chHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCcccc-C-CCCc--cccc--cccCCCCcccccchHHH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFD-G-RPNI--SRYN--DLFSGNRENCKKLSQMS 120 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~-~-r~~~--~~~~--~~~~~~~~~~~~~~~w~ 120 (429)
+|+..+.+| ++|||||++++ |+.++|+|+||+++++++.++ .|+ + ++.. ..+. .+.+.. ..++....|+
T Consensus 17 ~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~h~ 92 (396)
T 1n40_A 17 RIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEV-VNNMGNIADA 92 (396)
T ss_dssp SCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGG-GGHHHHHHHT
T ss_pred CccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchh-hhhhhhHHHH
Confidence 899999999 99999999998 789999999999999999876 466 4 4321 2111 111100 0123223787
Q ss_pred HHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH-H-------------------hcCCCcccccHHHHHHhhh
Q psy1301 121 KAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER-V-------------------YNNRDKAKMDLNTALFSLE 179 (429)
Q Consensus 121 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~-~-------------------~~~~~~~~~~~~~~~~~~~ 179 (429)
++|+.+.+.|+.. +..+ .+.+.+++ ++++.+... . .++.+..... .+.....
T Consensus 93 -~~R~~~~~~fs~~-~~~~---~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~~~~~ 165 (396)
T 1n40_A 93 -GLRKAVMKAITPK-APGL---EQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGP--KLFRSLS 165 (396)
T ss_dssp -TCHHHHHHHTSSC-STTH---HHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHH--HHHHTHH
T ss_pred -HHHHHHHHhhChH-HHHh---HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHHHhCCChhhHH--HHHHHHH
Confidence 7889998888777 7776 56666666 666666541 0 1121111100 1222111
Q ss_pred hhhcCcc--chhhhHHHhhhhccCChhHHHHH------HHHHHHHHHHh-c--C--CcHHHHHHHHHHHhh-cchhHHHH
Q psy1301 180 DIVGGHT--AISNFIMKTLGFLVNHPNVQAKI------QKEVDAITLRM-S--G--VHKLKVIFSLEDIVG-GHTAISNF 245 (429)
Q Consensus 180 ~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~------~d~l~~ll~~~-~--~--~~~~~i~~~~~~l~~-G~dtts~t 245 (429)
.+..... ......... ..+ .-+.+.+ .|+++.+++.. . + .+++++...+.++++ |+|||+++
T Consensus 166 ~~~~~~~~~p~~~~~~~~-~~~---~~~~~~i~~~~~~~dll~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTt~~~ 241 (396)
T 1n40_A 166 IAFMSSADPIPAAKINWD-RDI---EYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSF 241 (396)
T ss_dssp HHTBCCSSCCHHHHHHHH-HHH---HHHHHHHHCTTCCSHHHHHHHHHHTSGGGTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccCCCHHHHHHHH-HHH---HHHHHHHhCCCCCCCHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHhhhhHHHH
Confidence 1111000 000000000 000 0011111 46788888654 2 2 378888888888876 99999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CCccccCCCceecCEEeCCCC
Q psy1301 246 IMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IVPHVATQNSSIGGFEVKKDT 323 (429)
Q Consensus 246 l~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~~R~~~~d~~l~g~~ipkGt 323 (429)
++|++++|++||++|+|+++|++ |++|||+|+||++| ++ .++|.+.+|++++||.|||||
T Consensus 242 l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt 303 (396)
T 1n40_A 242 LTTALISLIQRPQLRNLLHEKPE------------------LIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGE 303 (396)
T ss_dssp HHHHHHHHHTCHHHHHHHHHCGG------------------GHHHHHHHHHHTCCCBCSCEEEEESSCEEETTEEECTTC
T ss_pred HHHHHHHHHcChHHHHHHHhCHH------------------HHHHHHHHHHhhCCCcccccceecCCCeeECCEEECCCC
Confidence 99999999999999999999853 78999999999999 88 599999999999999999999
Q ss_pred EEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC-
Q psy1301 324 MIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG- 401 (429)
Q Consensus 324 ~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~- 401 (429)
.|+++.+++||||++|+||++|+||||.+ ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++
T Consensus 304 ~V~~~~~~~~rdp~~~~dP~~F~PeR~~~--------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~ 375 (396)
T 1n40_A 304 LVLVLLEGANFDPEHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPI 375 (396)
T ss_dssp EEEECHHHHHTCTTTSSSTTSCCTTCSST--------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCG
T ss_pred EEEechHHhhCChhhCCChhhCCCCCCCC--------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCc
Confidence 99999999999999999999999999973 3689999999999999999999999999999999 5999765
Q ss_pred CCCcccccceeecCCceEEEE
Q psy1301 402 QQYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~ 422 (429)
.++.+....+...+.+++|++
T Consensus 376 ~~~~~~~~~~~~~~~~lpv~~ 396 (396)
T 1n40_A 376 DQLVWRTRFQRRIPERLPVLW 396 (396)
T ss_dssp GGCCBCCSBSBCCBSCCEEEC
T ss_pred cccccccccccCCcceeeeeC
Confidence 233332223344577888763
No 58
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=9.2e-52 Score=395.41 Aligned_cols=337 Identities=15% Similarity=0.176 Sum_probs=239.0
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCc--c----ccc---cc------c
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNI--S----RYN---DL------F 106 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~--~----~~~---~~------~ 106 (429)
.+.. +|+.++.+| ++|||||++++|+.++|+|+||+++++++.++ .|++++.. . .+. .+ .
T Consensus 11 ~~~~--~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (404)
T 1z8o_A 11 SFHV--DWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNY 85 (404)
T ss_dssp GGTS--SHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHH
T ss_pred cccc--CcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhh
Confidence 3445 899999999 99999999999999999999999999999876 67776543 2 110 11 0
Q ss_pred CCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHH----------------HH---hcCCCc
Q psy1301 107 SGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLE----------------RV---YNNRDK 166 (429)
Q Consensus 107 ~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~----------------~~---~~~~~~ 166 (429)
.+..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.. .+ .++.+.
T Consensus 86 ~~~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~ 161 (404)
T 1z8o_A 86 FATNMGTSDPPTHT-RLRKLVSQEFTVRRVEAM---RPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDE 161 (404)
T ss_dssp HSSSGGGCCTTHHH-HHHHHHHTTSCHHHHHHT---HHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCG
T ss_pred cccccccCCCcHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHHhCCCH
Confidence 12211112233488 789999988887777766 44444444 44433321 00 223221
Q ss_pred ccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCChh--------HHHHH----HHHHHHHHHH-hcC---CcHHHHHH
Q psy1301 167 AKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPN--------VQAKI----QKEVDAITLR-MSG---VHKLKVIF 230 (429)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--------~~~~~----~d~l~~ll~~-~~~---~~~~~i~~ 230 (429)
.... .+......+.. ... |...+......+ ++++. .|+++.+++. ..+ .+++++..
T Consensus 162 ~~~~--~~~~~~~~~~~-~~~-----p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~~l~~~ei~~ 233 (404)
T 1z8o_A 162 KYRG--EFGRWSSEILV-MDP-----ERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTS 233 (404)
T ss_dssp GGTT--THHHHHHHHHC-CCG-----GGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETTTEECCHHHHHH
T ss_pred HHHH--HHHHHHHHHhc-cCC-----hhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhcccCCCCCHHHHHH
Confidence 1111 12222222111 000 000000000000 11111 2577777765 322 37888888
Q ss_pred HHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCcccc
Q psy1301 231 SLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVA 308 (429)
Q Consensus 231 ~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~ 308 (429)
++.++++ |+|||+++++|++++|++||++|+||++|++ |++|||+|+||++| ++.++|.+
T Consensus 234 ~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~ 295 (404)
T 1z8o_A 234 IALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPS------------------ALPNAVEEILRYIAPPETTTRFA 295 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHTCSSCCEEEEE
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------hHHHHHHHHHHhcCCccCcceEE
Confidence 8888876 9999999999999999999999999999853 68999999999999 88899999
Q ss_pred CCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHH
Q psy1301 309 TQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLA 388 (429)
Q Consensus 309 ~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~ 388 (429)
.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++
T Consensus 296 ~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~ 366 (404)
T 1z8o_A 296 AEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDT---------RGHLSFGQGIHFCMGRPLAKLEGEVALR 366 (404)
T ss_dssp SSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCSSTTCCTTHHHHHHHHHHHHH
T ss_pred CCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCC---------CCccCCCCCCccCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999984 3689999999999999999999999999
Q ss_pred HHHHhc-ceeeCCCC-CCcccccceeecCCceEEEE
Q psy1301 389 SLFQSY-DLKKLPGQ-QYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 389 ~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 422 (429)
.|+++| ++++.++. ++++....+...+.+++|++
T Consensus 367 ~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~ 402 (404)
T 1z8o_A 367 ALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL 402 (404)
T ss_dssp HHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred HHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence 999999 58997542 33332223334577888875
No 59
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=3.8e-52 Score=397.29 Aligned_cols=337 Identities=13% Similarity=0.148 Sum_probs=237.0
Q ss_pred chHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccc------ccccC--CCCcccccchHH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRY------NDLFS--GNRENCKKLSQM 119 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~------~~~~~--~~~~~~~~~~~w 119 (429)
+|+.++.++ ++||||++ + |.++++|+||+++++++.++ .|++++....+ ..+.+ +..........|
T Consensus 14 ~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 87 (397)
T 3buj_A 14 DPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDH 87 (397)
T ss_dssp CCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHH
T ss_pred CchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCCchhH
Confidence 889999887 69999999 7 58899999999999999863 67655322100 01111 221112223348
Q ss_pred HHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHhhh
Q psy1301 120 SKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFSLE 179 (429)
Q Consensus 120 ~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~ 179 (429)
+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.... .++.+..... .+.....
T Consensus 88 ~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~~G~~~~~~~--~~~~~~~ 161 (397)
T 3buj_A 88 G-RLRGVVGPAFSPSALRRL---EPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGLLGLPAADWG--AVGRWSR 161 (397)
T ss_dssp H-HHHHHHGGGSSTTTTGGG---HHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHHHTCCGGGHH--HHHHHHH
T ss_pred H-HHHHHHHHhcCHHHHHHH---HHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHHhCCCHHHHH--HHHHHHH
Confidence 8 889999988887777766 45555555 5555543210 1232211111 1222211
Q ss_pred hhhcCccchhhhHH-HhhhhccCChh--------HHHHH----HHHHHHHHHHhcC--CcHHHHHHHHHHHhh-cchhHH
Q psy1301 180 DIVGGHTAISNFIM-KTLGFLVNHPN--------VQAKI----QKEVDAITLRMSG--VHKLKVIFSLEDIVG-GHTAIS 243 (429)
Q Consensus 180 ~~~~~~~~~~~~~p-~l~~~~~~~~~--------~~~~~----~d~l~~ll~~~~~--~~~~~i~~~~~~l~~-G~dtts 243 (429)
.+....... +.+ ...+......+ ++++. .|+++.+++...+ .+++++...+.++++ |+|||+
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~ls~~ei~~~~~~~~~AG~~Tt~ 239 (397)
T 3buj_A 162 DVGRTLDRG--ASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDRGLMSRNEIVSTVVTFIFTGHETVA 239 (397)
T ss_dssp HHHGGGCSS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCC--CChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhhhcCCCCHHHHHHHHHHHHHcCchHHH
Confidence 111100000 000 00000000000 11111 2567777765322 478888888888876 999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCC
Q psy1301 244 NFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKD 322 (429)
Q Consensus 244 ~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkG 322 (429)
++++|++++|++||++|+||++|++ |++|||+|+||++| ++.++|.+.+|++++||.||||
T Consensus 240 ~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~G 301 (397)
T 3buj_A 240 SQVGNAVLSLLAHPDQLDLLRRRPD------------------LLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRD 301 (397)
T ss_dssp HHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSCCEEEEEESSCEEETTEEECTT
T ss_pred HHHHHHHHHHHhCHHHHHHHhhCHH------------------HHHHHHHHHHhhcCcccCcceEECCCEEECCEEECCC
Confidence 9999999999999999999999853 88999999999999 8889999999999999999999
Q ss_pred CEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC
Q psy1301 323 TMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG 401 (429)
Q Consensus 323 t~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 401 (429)
|.|.++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.| ++| ++++.++
T Consensus 302 t~V~~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~ 371 (397)
T 3buj_A 302 DVVVVLAGAANRDPRRYDRPDDFDIERDP---------VPSMSFGAGMRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCA 371 (397)
T ss_dssp CEEEEEHHHHTTCTTTCSSTTSCCTTSCC---------CCCSTTCCGGGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSC
T ss_pred CEEEEChhhhCCCccccCCccccCCCCCC---------CCCCCCCCCCccCCCHHHHHHHHHHHHHHH-hcCCCceeCCC
Confidence 99999999999999999999999999995 357999999999999999999999999999 999 8999866
Q ss_pred -CCCcccccceeecCCceEEEEEeCC
Q psy1301 402 -QQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 402 -~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
.++++.......++.+++|++++|.
T Consensus 372 ~~~~~~~~~~~~~~~~~l~v~~~~rg 397 (397)
T 3buj_A 372 SDALAYQPRTMFRGLASLPIAFTPGG 397 (397)
T ss_dssp STTCCBCSCSSCCCBSCCEEECCTTC
T ss_pred CcccccccccccCCCcceeEEecCCC
Confidence 3333322234456889999998873
No 60
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.6e-52 Score=395.78 Aligned_cols=339 Identities=14% Similarity=0.145 Sum_probs=238.8
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccccCCCCcccccchHHHHHHHHH
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFSGNRENCKKLSQMSKAIRAF 126 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~w~~~lR~~ 126 (429)
.+|+.++.+|++ |||||++. .++|+|+||+++++++.++. .|++++... ...+ .+..........|+ ++|+.
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~-~~~~l~~~~g~~h~-~~R~~ 89 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP-ALPMMIDMDDPAHL-LRRKL 89 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC-CCSSGGGCCTTHHH-HHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc-ccccccccCchHHH-HHHHH
Confidence 489999999987 99999764 37999999999999998764 688775432 2222 22211122233488 88999
Q ss_pred HHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH----------------H---hcCCCcccccHHHHHHhhhhhhcCcc
Q psy1301 127 VMENLMNDRIVKYERNERNNNDEE-DYVDSLLER----------------V---YNNRDKAKMDLNTALFSLEDIVGGHT 186 (429)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~----------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (429)
+.+.|+...+..+ ++.+.+.+ ++++.+... + .++.+..... .+......+.....
T Consensus 90 ~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~--~~~~~~~~~~~~~~ 164 (398)
T 2xkr_A 90 VNAGFTRKRVKDK---EASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDMLGVRPEQRD--MFLRWSDDLVTFLS 164 (398)
T ss_dssp HGGGSCHHHHHTT---HHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHH--HHHHHHHHHHHHHT
T ss_pred hhhhhCHHHHHHH---HHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHH--HHHHHHHHHHhccC
Confidence 9888887776666 33333333 333333210 0 1343322111 22222222211000
Q ss_pred chhhhHHHhhhhc-cCChh--------HHHHH----HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHH
Q psy1301 187 AISNFIMKTLGFL-VNHPN--------VQAKI----QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKT 249 (429)
Q Consensus 187 ~~~~~~p~l~~~~-~~~~~--------~~~~~----~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~ 249 (429)
. .++|...+.. ....+ ++++. .|+++.+++...+ .+++++...+.++++ |+|||+++++|+
T Consensus 165 ~--~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~ 242 (398)
T 2xkr_A 165 S--HVSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGG 242 (398)
T ss_dssp S--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred c--ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 0 0011100000 00000 11111 2567777655322 378888888888876 999999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeec
Q psy1301 250 LGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLN 328 (429)
Q Consensus 250 l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~ 328 (429)
+++|++||++|+||++|++ |++|||+|+||++| ++.++|.+.+|++++||.|||||.|+++
T Consensus 243 l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~ 304 (398)
T 2xkr_A 243 TEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLL 304 (398)
T ss_dssp HHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEE
T ss_pred HHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccCcceEECCCeeECCEEECCCCEEEeC
Confidence 9999999999999999965 78999999999999 8889999999999999999999999999
Q ss_pred hhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCCc-c
Q psy1301 329 NYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQYK-V 406 (429)
Q Consensus 329 ~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~-~ 406 (429)
.+++||||++|+||++|+||||.. .++|||.|+|.|+|++||++|++++++.|+++| ++++.++..++ .
T Consensus 305 ~~~~~rdp~~~~dP~~F~PeR~~~---------~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~ 375 (398)
T 2xkr_A 305 FESANFDEAVFCEPEKFDVQRNPN---------SHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPL 375 (398)
T ss_dssp HHHHHTCTTTSSSTTSCCTTCSSC---------CCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESCTTCCCCB
T ss_pred hhhhcCChhhCCCCCeeCCCCCCC---------CCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceECCCcceecc
Confidence 999999999999999999999852 489999999999999999999999999999999 59997543332 0
Q ss_pred cccceeecCCceEEEEEeCCC
Q psy1301 407 PIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~r~~ 427 (429)
........+.+++|+++||..
T Consensus 376 ~~~~~~~~~~~lpv~~~p~~r 396 (398)
T 2xkr_A 376 RPANFVSGLESMPVVFTPSPP 396 (398)
T ss_dssp CCCSSBCCBSCCEEECCCCCC
T ss_pred cCcccccCccceeEEecCCCC
Confidence 123455668899999988753
No 61
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=2.6e-52 Score=399.83 Aligned_cols=346 Identities=14% Similarity=0.178 Sum_probs=239.4
Q ss_pred ccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCC-Ccccc-----c---ccc---C-
Q psy1301 42 LLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRP-NISRY-----N---DLF---S- 107 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~-~~~~~-----~---~~~---~- 107 (429)
.+.. +|+..+.+| ++|||||++++ |+.++|+|+||+++++++.++. |++++ .+... . .+. .
T Consensus 14 ~~~~--~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (411)
T 1gwi_A 14 PFVT--DLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANP 88 (411)
T ss_dssp TTCS--CHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSC
T ss_pred cccC--ChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcc
Confidence 4455 899999999 99999999998 8899999999999999998763 44433 11110 0 000 1
Q ss_pred CCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHH-----------------HH---hcCCCc
Q psy1301 108 GNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLE-----------------RV---YNNRDK 166 (429)
Q Consensus 108 ~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~-----------------~~---~~~~~~ 166 (429)
+..........|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.. .+ .++.+.
T Consensus 89 ~~~l~~~~g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~ 164 (411)
T 1gwi_A 89 GRSMLTVDGAEHR-RLRTLVAQALTVRRVEHM---RGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEE 164 (411)
T ss_dssp CSSGGGCCHHHHH-HHHHHHTTTSCHHHHHTT---HHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCG
T ss_pred ccccccCCcHHHH-HHHHHHHHhcCHHHHHHH---HHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHHHhCCCH
Confidence 1211111223387 889999888887777666 44444444 44444321 00 122211
Q ss_pred ccccHHHHHHhhhhhhcCccchhhhHH---HhhhhccCChhHHHHH----HHHHHHHHHHhc---CCcHHHHHHHHHHHh
Q psy1301 167 AKMDLNTALFSLEDIVGGHTAISNFIM---KTLGFLVNHPNVQAKI----QKEVDAITLRMS---GVHKLKVIFSLEDIV 236 (429)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~p---~l~~~~~~~~~~~~~~----~d~l~~ll~~~~---~~~~~~i~~~~~~l~ 236 (429)
.... .+......+............ .+..++. ..+.++. .|+++.+++... ..+++++..++.+++
T Consensus 165 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~r~~~~~~d~l~~ll~~~~~~~~l~~~~i~~~~~~~~ 240 (411)
T 1gwi_A 165 ARLP--RLKVLFEKFFSTQTPPEEVVATLTELASIMT--DTVAAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQLMV 240 (411)
T ss_dssp GGHH--HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHH--HHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHHHHHHH
T ss_pred HHHH--HHHHHHHHHhccCCChHHHHHHHHHHHHHHH--HHHHHHHhCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 1111 122221111110000000000 0000000 0011111 256777776432 237888888888887
Q ss_pred h-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCce
Q psy1301 237 G-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSS 313 (429)
Q Consensus 237 ~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~ 313 (429)
+ |+|||+++++|++++|++||++|+||++|+ +|++|||+|+||++| ++. ++|.+.+|++
T Consensus 241 ~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~ 302 (411)
T 1gwi_A 241 AAGHETTISLIVNAVVNLSTHPEQRALVLSGE------------------AEWSAVVEETLRFSTPTSHVLIRFAAEDVP 302 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS------------------SCHHHHHHHHHHHSCSBCCEEEEEESSCEE
T ss_pred HHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh------------------HHHHHHHHHHHHhCCcccCCceeeeCCCeE
Confidence 6 999999999999999999999999999863 368999999999999 886 9999999999
Q ss_pred ecCEEeCCCCEEeechhhhccCCCCC-CCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHH
Q psy1301 314 IGGFEVKKDTMIFLNNYDLNMSPELW-SEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQ 392 (429)
Q Consensus 314 l~g~~ipkGt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~ 392 (429)
++||.|||||.|+++.+++||||++| +||++|+||||.+ ..++|||.|+|.|+|++||++|++++++.|++
T Consensus 303 ~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~--------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~ 374 (411)
T 1gwi_A 303 VGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG--------NRHISFGHGPHVCPGAALSRMEAGVALPALYA 374 (411)
T ss_dssp ETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS--------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHH
T ss_pred ECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC--------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 9999999999952 47899999999999999999999999999999
Q ss_pred hc-ceeeCCC-CCCcccccceeecCCceEEEEEeCC
Q psy1301 393 SY-DLKKLPG-QQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 393 ~f-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
+| ++++..+ .++++....+..++.+++|++++|.
T Consensus 375 ~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~ 410 (411)
T 1gwi_A 375 RFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH 410 (411)
T ss_dssp HCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred hCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence 99 7999743 2333322234456789999998884
No 62
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=6.7e-51 Score=391.06 Aligned_cols=314 Identities=15% Similarity=0.186 Sum_probs=230.7
Q ss_pred chHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhhcCccccCCCCc---ccccccc-----CCCCcccccchH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFVKATDFDGRPNI---SRYNDLF-----SGNRENCKKLSQ 118 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~~~~~f~~r~~~---~~~~~~~-----~~~~~~~~~~~~ 118 (429)
||+.++.+|+++ ||||+++++ |.++|||+||+++++++.++ .|++++.. ....... .+..........
T Consensus 30 dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 106 (417)
T 3tyw_A 30 AAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAPE 106 (417)
T ss_dssp SCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHHH
T ss_pred CchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCcH
Confidence 999999999888 999999997 58999999999999999987 67765322 2111111 112111112233
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHH-----HHhhhhhhcCcc--chhh
Q psy1301 119 MSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTA-----LFSLEDIVGGHT--AISN 190 (429)
Q Consensus 119 w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~ 190 (429)
|+ ++|+++.+.|+...+..+ ++.+.+++ ++++.+... +.. .++. ..+ .+.+..+ .|.. ....
T Consensus 107 h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---g~~-~d~~-~~~~~~~~~~vi~~~-~G~~~~~~~~ 176 (417)
T 3tyw_A 107 HT-RYRRMLLPAFTVRRVRAM---RPAVQARVDEILDGMLAA---GGP-VDLV-SAYANAVSTSVICEL-LGIPRHDLEF 176 (417)
T ss_dssp HH-HHHHHHGGGGCHHHHHHT---HHHHHHHHHHHHHHHHHH---CSS-EEHH-HHTHHHHHHHHHHHH-HTCCTTTTTH
T ss_pred HH-HHHHHHHhhhCHHHHHHH---HHHHHHHHHHHHHHHHhh---CCC-cchH-HHHHHHHHHHHHHHH-hCCCHHHHHH
Confidence 88 889999998988888887 66677777 777776552 110 0110 001 1111111 1110 0011
Q ss_pred hHHHh---hhhccCChh---HHHHH----------------HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHH
Q psy1301 191 FIMKT---LGFLVNHPN---VQAKI----------------QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISN 244 (429)
Q Consensus 191 ~~p~l---~~~~~~~~~---~~~~~----------------~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~ 244 (429)
+..+. ........+ ..+.+ .|+++.++....+ .+++++...+.++++ |+|||++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~el~~~~~~l~~AG~eTta~ 256 (417)
T 3tyw_A 177 FRDVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLVPGNVTTEQLLSTLGITINAGRETTTS 256 (417)
T ss_dssp HHHHHHHHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHTTTTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHhhhHHHHHH
Confidence 11111 011111111 11111 3567777765432 278888888887766 9999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCC
Q psy1301 245 FIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKD 322 (429)
Q Consensus 245 tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkG 322 (429)
+++|++++|++||++|+||++|++ |+++||+|+||++| ++. ++|.+.+|++++||.||||
T Consensus 257 ~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G 318 (417)
T 3tyw_A 257 MIALSTLLLLDRPELPAELRKDPD------------------LMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPAD 318 (417)
T ss_dssp HHHHHHHHHHHCTHHHHHHHHCGG------------------GHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEECTT
T ss_pred HHHHHHHHHHcCHHHHHHHHhChH------------------HHHHHHHHHHHhccccccCceeEeCCCeEECCEEECCC
Confidence 999999999999999999999854 67999999999999 887 8999999999999999999
Q ss_pred CEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC
Q psy1301 323 TMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG 401 (429)
Q Consensus 323 t~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~ 401 (429)
|.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||.+|++++++.|+++| +++++++
T Consensus 319 t~V~~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~ 389 (417)
T 3tyw_A 319 DGVIALLAGANHDPEQFDDPERVDFHRTD---------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE 389 (417)
T ss_dssp CEEEECHHHHTTCTTTSSSTTSCCTTCSC---------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred CEEEEehhhhcCChhhcCCccccCCCCCC---------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence 99999999999999999999999999993 4689999999999999999999999999999999 9999743
No 63
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=3.3e-52 Score=400.26 Aligned_cols=338 Identities=12% Similarity=0.104 Sum_probs=240.8
Q ss_pred chHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCC-----cc---ccccccC--CCCcccccch
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPN-----IS---RYNDLFS--GNRENCKKLS 117 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~-----~~---~~~~~~~--~~~~~~~~~~ 117 (429)
+|+.++.+| ++|||||+ + ++.++|+|+||+++++++.+++ |++++. +. ....+.. +.........
T Consensus 27 ~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 101 (419)
T 1q5d_A 27 DPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLPPE 101 (419)
T ss_dssp CCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSCHH
T ss_pred ChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCCch
Confidence 899999999 79999999 6 7789999999999999999874 887752 11 1111110 1111112233
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHh
Q psy1301 118 QMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFS 177 (429)
Q Consensus 118 ~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~ 177 (429)
.|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.... .++.+..... .+...
T Consensus 102 ~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~--~~~~~ 175 (419)
T 1q5d_A 102 DHA-RVRKLVNPSFTSRAIDLL---RAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDE--KFRRF 175 (419)
T ss_dssp HHH-HHHHHHGGGGSHHHHGGG---HHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHH--HHHHH
T ss_pred HHH-HHHHHHHHhcCHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCHHHHH--HHHHH
Confidence 487 889999998888777777 55566666 6666654321 1222111110 11111
Q ss_pred hhhhhcCccchhhhHHHhhhhccCChh------------HHHHH----H-HHHHHHHHHhcC---CcHHHHHHHHHHHhh
Q psy1301 178 LEDIVGGHTAISNFIMKTLGFLVNHPN------------VQAKI----Q-KEVDAITLRMSG---VHKLKVIFSLEDIVG 237 (429)
Q Consensus 178 ~~~~~~~~~~~~~~~p~l~~~~~~~~~------------~~~~~----~-d~l~~ll~~~~~---~~~~~i~~~~~~l~~ 237 (429)
...+..... ...+|+.........+ ++++. . |+++.+++...+ .+++++..++.++++
T Consensus 176 ~~~~~~~~~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~~l~~~ei~~~~~~l~~ 253 (419)
T 1q5d_A 176 GSATARALG--VGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIA 253 (419)
T ss_dssp HHHHHHHTT--TTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHSSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcc--cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHhhhccCCCCCHHHHHHHHHHHHH
Confidence 111110000 0000100000000000 11111 2 678888765322 378888888888876
Q ss_pred -cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CCccccCCCcee
Q psy1301 238 -GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IVPHVATQNSSI 314 (429)
Q Consensus 238 -G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~~R~~~~d~~l 314 (429)
|+|||+++++|++++|++||++|+||++|+ .|++|||+|+||++| ++ .++|.+.+|+++
T Consensus 254 AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l 315 (419)
T 1q5d_A 254 AGTDTTIYLIAFAVLNLLRSPEALELVKAEP------------------GLMRNALDEVLRFDNILRIGTVRFARQDLEY 315 (419)
T ss_dssp HHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBSSEEEEEESSCEEE
T ss_pred HhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCccccccceeeCCCeEE
Confidence 999999999999999999999999999984 378999999999999 88 599999999999
Q ss_pred cCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc
Q psy1301 315 GGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY 394 (429)
Q Consensus 315 ~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f 394 (429)
+||.|||||.|+++.+++||||++|+||++|+|||| +..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus 316 ~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~---------~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f 386 (419)
T 1q5d_A 316 CGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386 (419)
T ss_dssp TTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSC---------CTTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCC---------CCCCCCCCCCCCcCccHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999994 14689999999999999999999999999999999
Q ss_pred -ceeeCCCCCCcccccceeecCCceEEEEEeCCC
Q psy1301 395 -DLKKLPGQQYKVPIGDLALPYNTFRFNFSPRNL 427 (429)
Q Consensus 395 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 427 (429)
++++.++. ++....+...+.+++|++++|.+
T Consensus 387 ~~~~~~~~~--~~~~~~~~~~~~~l~v~~~~r~~ 418 (419)
T 1q5d_A 387 PEMKLKETP--VFGYHPAFRNIESLNVILKPSKA 418 (419)
T ss_dssp TTCEECSCC--EECCCSSBCCEEECEEESSCC--
T ss_pred CCeEECCCc--ccccccccCCCceeEEEEecCCC
Confidence 89998653 22223445567899999999864
No 64
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.2e-50 Score=392.63 Aligned_cols=336 Identities=14% Similarity=0.200 Sum_probs=240.1
Q ss_pred hHHHHHHHHHhcCCee--EEe-eCCccEEEEcChHHHHHHHhhcCccccCCCCcccccccc--------------CCCCc
Q psy1301 49 PYQAFKVISKTHGSIF--RLK-LGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLF--------------SGNRE 111 (429)
Q Consensus 49 ~~~~~~~~~~~yG~if--~i~-lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~--------------~~~~~ 111 (429)
|+..+.++ ++||||+ +++ +|+.++++|+++++++++++++ ..|++++......... .+...
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 89999999 6899999 998 7889999999999999999876 5788776543321110 00111
Q ss_pred ccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHH-H-------------------hcCCCccccc
Q psy1301 112 NCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLER-V-------------------YNNRDKAKMD 170 (429)
Q Consensus 112 ~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~-~-------------------~~~~~~~~~~ 170 (429)
.......|+ ++|+.+.+.|+...++.+ ++.+.+++ ++++.+... . .++.+..+..
T Consensus 125 ~~~dg~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~ 200 (450)
T 3tkt_A 125 VQMDAPKHP-KLRRLTQDWFMPKNLARL---DGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEP 200 (450)
T ss_dssp GGCCTTHHH-HHHHHHHTTTSHHHHGGG---HHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHHTTCCGGGHH
T ss_pred ccCCCHHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHHcCCChhHHH
Confidence 112233488 889999999988888877 56566666 666665541 0 2333322222
Q ss_pred HHHHHHhhhhhhcCccchhhhHHHhhhhccC--C--h---hHHHHHH----------------HHHHHHHHHhcC---Cc
Q psy1301 171 LNTALFSLEDIVGGHTAISNFIMKTLGFLVN--H--P---NVQAKIQ----------------KEVDAITLRMSG---VH 224 (429)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~--~--~---~~~~~~~----------------d~l~~ll~~~~~---~~ 224 (429)
.+......+...... .+.++. .++.. . + +..+.+. |+++.+++...+ .+
T Consensus 201 --~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls 275 (450)
T 3tkt_A 201 --KMLFLTQQMFGGQDE--DMNKSG-LKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAVVDGEPMS 275 (450)
T ss_dssp --HHHHHHHTTSCCC-------------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEETTEECC
T ss_pred --HHHHHHHHHhccccc--hhhccc-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhccccCCCCC
Confidence 333333333221110 111111 11000 0 0 1111122 355555543322 27
Q ss_pred HHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC
Q psy1301 225 KLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP 302 (429)
Q Consensus 225 ~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~ 302 (429)
++++...+.++++ |+|||+++++|++++|++||++|+||++|++ |+++||+|+||++| ++
T Consensus 276 ~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~LRl~pp~~ 337 (450)
T 3tkt_A 276 DRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADRN------------------LLPGIVEEAIRWTTPVQ 337 (450)
T ss_dssp HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCHH------------------HHHHHHHHHHHhCCCcc
Confidence 8888888888776 9999999999999999999999999999953 78999999999999 88
Q ss_pred CCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHH
Q psy1301 303 IVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLI 382 (429)
Q Consensus 303 ~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e 382 (429)
.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|
T Consensus 338 ~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e 408 (450)
T 3tkt_A 338 HFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPA---------NRHLAFGAGSHQCLGLHLARLE 408 (450)
T ss_dssp EEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCT---------TCSSTTCCSTTCCTTHHHHHHH
T ss_pred CcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCC---------CCCCCCCCcCccCccHHHHHHH
Confidence 8999999999999999999999999999999999999999999999942 3689999999999999999999
Q ss_pred HHHHHHHHHHhcc-eeeCCCCCCcccccceeecCCceEEEEEe
Q psy1301 383 SFTTLASLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 383 ~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
++++++.|+++|+ +++. ++. ......+...+..++|++++
T Consensus 409 ~~~~l~~ll~~f~~~~l~-~~~-~~~~~~~~~g~~~lpv~~~~ 449 (450)
T 3tkt_A 409 MRVLLDVLLDRVDSLELA-GEP-KRVNSTFVGGFKSLPMRWKA 449 (450)
T ss_dssp HHHHHHHHHHHEEEEEES-SCC-EECCCSSBCCEEECEEEEEE
T ss_pred HHHHHHHHHHhCCCceeC-CCc-ccccCcccCCcccceEEEec
Confidence 9999999999998 5665 322 22222344556788888875
No 65
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=2.7e-51 Score=394.32 Aligned_cols=334 Identities=13% Similarity=0.160 Sum_probs=233.5
Q ss_pred CchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccccccc---------CCCCcccccch
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLF---------SGNRENCKKLS 117 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~---------~~~~~~~~~~~ 117 (429)
.+|+.++.+| ++||||+++++| +|+|++|++++++++++. .+++++......... .+.........
T Consensus 29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 103 (418)
T 3r9b_A 29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDPP 103 (418)
T ss_dssp TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGCCTT
T ss_pred cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhcCCc
Confidence 3999999998 688999998876 999999999999998753 445544322111111 11211122334
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHh
Q psy1301 118 QMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFS 177 (429)
Q Consensus 118 ~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~ 177 (429)
.|+ ++|+++.+.|+...+..+ ++.+.+.+ ++++ +.... .++.+..... .+...
T Consensus 104 ~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~-l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~~~ 176 (418)
T 3r9b_A 104 DHT-RLRGLVSKAFAPRVIKRL---EPEITALVDQLLD-AVDGPEFNLIDNLAYPLPVAVICRLLGVPIEDEP--KFSRA 176 (418)
T ss_dssp HHH-HHHHHHHGGGSHHHHGGG---HHHHHHHHHHHHH-TCCSSEEEHHHHTTTHHHHHHHHHHHTCCGGGHH--HHHHH
T ss_pred hHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHh-hhccCCeehHHHHhCcCCHHHHHHHcCCCHHHHH--HHHHH
Confidence 488 889999998888887777 55555555 5554 32110 1232211111 12221
Q ss_pred hhhhhcCccchhhhHHHhhhhccCC--h---hHHHHH----------------HHHHHHHHHHhc---CCcHHHHHHHHH
Q psy1301 178 LEDIVGGHTAISNFIMKTLGFLVNH--P---NVQAKI----------------QKEVDAITLRMS---GVHKLKVIFSLE 233 (429)
Q Consensus 178 ~~~~~~~~~~~~~~~p~l~~~~~~~--~---~~~~~~----------------~d~l~~ll~~~~---~~~~~~i~~~~~ 233 (429)
...+..... ..+.+ .+++.. . +..+.+ .|+++.+++... ..+++++...+.
T Consensus 177 ~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~~~ls~~ei~~~~~ 251 (418)
T 3r9b_A 177 SALLAAALD----PFLAL-TGETSDLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEESGDQLTEDEIIATCN 251 (418)
T ss_dssp HHHHHHTTS----CHHHH-HSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSHHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHhhcC----ccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhhccCCCCHHHHHHHHH
Confidence 111110000 00000 111111 1 111111 246666664422 237888888888
Q ss_pred HHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCC
Q psy1301 234 DIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQN 311 (429)
Q Consensus 234 ~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d 311 (429)
++++ |+|||+++++|++++|++||++|+||++|++ |+++||+|+||++| ++.++|.+.+|
T Consensus 252 ~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d 313 (418)
T 3r9b_A 252 LLLIAGHETTVNLIANAALAMLRTPGQWAALAADGS------------------RASAVIEETMRYDPPVQLVSRYAGDD 313 (418)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCGG------------------GHHHHHHHHHHHSCSBCCEEEEESSC
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhChH------------------hHHHHHHHHHHhCCccccceeEeCCC
Confidence 8766 9999999999999999999999999999865 67999999999999 88888999999
Q ss_pred ceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHH
Q psy1301 312 SSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLF 391 (429)
Q Consensus 312 ~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll 391 (429)
++++||.|||||.|+++.+++||||++|+||++|+|||. +..++|||.|+|.|+|++||.+|++++++.|+
T Consensus 314 ~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll 384 (418)
T 3r9b_A 314 LTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRA---------QIRHLGFGKGAHFCLGAPLARLEATVALPALA 384 (418)
T ss_dssp EEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCS---------CCCCCTTCCGGGCCTTHHHHHHHHHHHHHHHH
T ss_pred eEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCC---------CCCCcCCCCcCccCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999992 34789999999999999999999999999999
Q ss_pred Hhc-ceeeCCCCCCcccccceeecCCceEEEEEeCC
Q psy1301 392 QSY-DLKKLPGQQYKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 392 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
++| ++++.++. ..........+.+++|++.+|.
T Consensus 385 ~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~~~r~ 418 (418)
T 3r9b_A 385 ARFPEARLSGEP--EYKRNLTLRGMSTLSIAVHHHH 418 (418)
T ss_dssp HHCTTCEECSCC--EECSCSSBCCEEECEEEC----
T ss_pred HhCccceeCCCC--ccccCCcccCcceeEEEecCCC
Confidence 999 89987652 2222234445779999998874
No 66
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=8.5e-51 Score=387.95 Aligned_cols=333 Identities=13% Similarity=0.154 Sum_probs=226.0
Q ss_pred HHHHHHHhcCCeeEEeeC-Cc---cEEEEcChHHHHHHHhhcCccccCCCCc------c---ccccccCCCCcccccchH
Q psy1301 52 AFKVISKTHGSIFRLKLG-VV---PAIVVNGLENIKEVLFVKATDFDGRPNI------S---RYNDLFSGNRENCKKLSQ 118 (429)
Q Consensus 52 ~~~~~~~~yG~if~i~lg-~~---~~vvv~~p~~i~~il~~~~~~f~~r~~~------~---~~~~~~~~~~~~~~~~~~ 118 (429)
.+.+|+++ ||||+++++ |. ++|+|+||+++++++.++. .|+.++.+ . .......+..........
T Consensus 18 ~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 95 (398)
T 1lfk_A 18 PADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPE 95 (398)
T ss_dssp ECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCCTTH
T ss_pred hhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccCCHH
Confidence 44457666 999999875 55 8999999999999993332 57766541 1 111111222111122334
Q ss_pred HHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcc---cccHHHHHHhhhhhhcCcc--chhhhH
Q psy1301 119 MSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKA---KMDLNTALFSLEDIVGGHT--AISNFI 192 (429)
Q Consensus 119 w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~~~~~ 192 (429)
|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+... +..-+ .+...-..+.+..+ .|.. ....+.
T Consensus 96 ~~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~ 167 (398)
T 1lfk_A 96 HT-RLRRKLTPGFTLRKMQRM---APYIEQIVNDRLDEMERA---GSPADLIAFVADKVPGAVLCEL-VGVPRDDRDMFM 167 (398)
T ss_dssp HH-HHHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHHHHHH---CSSEEHHHHTTTTHHHHHHHHH-HTCCGGGHHHHH
T ss_pred HH-HHHHHHHhhhCHHHHHHH---HHHHHHHHHHHHHHHHhc---CCCccHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 88 889999999988888888 67777777 777777532 11000 00000001111111 1110 000111
Q ss_pred HHhhhhcc---CCh---h------------HHHHH----HHHHHHHHHHh-cCCcHHHHHHHHHHHhh-cchhHHHHHHH
Q psy1301 193 MKTLGFLV---NHP---N------------VQAKI----QKEVDAITLRM-SGVHKLKVIFSLEDIVG-GHTAISNFIMK 248 (429)
Q Consensus 193 p~l~~~~~---~~~---~------------~~~~~----~d~l~~ll~~~-~~~~~~~i~~~~~~l~~-G~dtts~tl~w 248 (429)
.+....+. ..+ + ++++. .|+++.+++.. ...+++++...+.+++. |+|||+++++|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~l~~~el~~~~~~l~~AG~dTt~~~l~~ 247 (398)
T 1lfk_A 168 KLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEYGDDATDEELRGFCVQVMLAGDDNISGMIGL 247 (398)
T ss_dssp HHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 11100000 000 0 11111 25677776543 12378888888888876 99999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CC-CCccccCCCceecCEEeCCCCEEe
Q psy1301 249 TLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SP-IVPHVATQNSSIGGFEVKKDTMIF 326 (429)
Q Consensus 249 ~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~-~~~R~~~~d~~l~g~~ipkGt~v~ 326 (429)
++++|++||++|+||++|++ |++|||+|+||++| ++ .++|.+.+|++++||.|||||.|+
T Consensus 248 ~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~ 309 (398)
T 1lfk_A 248 GVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVI 309 (398)
T ss_dssp HHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEE
T ss_pred HHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEE
Confidence 99999999999999999975 67999999999999 88 599999999999999999999999
Q ss_pred echhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCC-CCC
Q psy1301 327 LNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPG-QQY 404 (429)
Q Consensus 327 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~-~~~ 404 (429)
++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .++
T Consensus 310 ~~~~~~~rdp~~~~dP~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~ 380 (398)
T 1lfk_A 310 CSLPAANRDPALAPDVDRLDVTREP---------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLADPAQDT 380 (398)
T ss_dssp ECHHHHTTCTTTCTTTTSCCTTSCC---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSTTCCC
T ss_pred eChHHhCCCchhcCCccccCCCCCC---------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCCCCCcc
Confidence 9999999999999999999999983 3689999999999999999999999999999999 8999743 223
Q ss_pred cccccceeecCCceEEE
Q psy1301 405 KVPIGDLALPYNTFRFN 421 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~~~ 421 (429)
++........+..++|+
T Consensus 381 ~~~~~~~~~~~~~lpv~ 397 (398)
T 1lfk_A 381 EFRLTTPAYGLTELMVA 397 (398)
T ss_dssp EEECSSSBCEEEECEEE
T ss_pred ccccCcCcCCcccceee
Confidence 33222233345566664
No 67
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=1.8e-50 Score=389.50 Aligned_cols=330 Identities=15% Similarity=0.131 Sum_probs=238.0
Q ss_pred chHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhhcCccccCCCCc--c-cccccc-CCCCcccccc
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFVKATDFDGRPNI--S-RYNDLF-SGNRENCKKL 116 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~~~~~f~~r~~~--~-~~~~~~-~~~~~~~~~~ 116 (429)
+|+.++.+|+ +|||||+++++ +.++|+|+||+++++++.++ ..|++++.. . ....+. .+........
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg 122 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLDD 122 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCCT
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCCc
Confidence 7999999995 79999999986 67899999999999999986 378877532 1 111111 0111111223
Q ss_pred hHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH----------------------hcCCCcccccHHH
Q psy1301 117 SQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV----------------------YNNRDKAKMDLNT 173 (429)
Q Consensus 117 ~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~----------------------~~~~~~~~~~~~~ 173 (429)
..|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+.... .++.+..... .
T Consensus 123 ~~h~-~~R~~l~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~--~ 196 (435)
T 2wm5_A 123 PRHQ-RLRSIVSRAFTPKVVARI---EAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQ--R 196 (435)
T ss_dssp THHH-HHHHHHHHTCCHHHHHHH---HHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHH--H
T ss_pred HHHH-HHHHHhHHhhCHHHHHHH---HHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHHcCCCHHHHH--H
Confidence 3488 889999998888888777 66666666 6666665421 0111111000 1
Q ss_pred HHHhhhhhhcCccchhhhHHHhhhhccCChh---HHHHH----------------HHHHHHHHHHhcC---CcHHHHHHH
Q psy1301 174 ALFSLEDIVGGHTAISNFIMKTLGFLVNHPN---VQAKI----------------QKEVDAITLRMSG---VHKLKVIFS 231 (429)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~---~~~~~----------------~d~l~~ll~~~~~---~~~~~i~~~ 231 (429)
+......+.... .|++ .+..++ ..+++ .|+++.+++...+ .+++++...
T Consensus 197 ~~~~~~~~~~~~------~p~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~~~ls~~ei~~~ 267 (435)
T 2wm5_A 197 IFHWTNVILGFG------DPDL---ATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASF 267 (435)
T ss_dssp HHHHHHHHHHTT------CTTS---CCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBTTBCCCHHHHHHH
T ss_pred HHHHHHHHhccC------Ccch---hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhhhccCCCCCHHHHHHH
Confidence 111111110000 0110 010011 11111 2566667654322 378888888
Q ss_pred HHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccC
Q psy1301 232 LEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVAT 309 (429)
Q Consensus 232 ~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~ 309 (429)
+.++++ |+|||+++++|++++|++||++|+||++|++ +|++|||+|+||++| ++.++|.+.
T Consensus 268 ~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~ 330 (435)
T 2wm5_A 268 FILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEEIVRWASPVVYMRRTLT 330 (435)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHHHHHHHCSBCCEEEEES
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHHHHhhcCcccCcceEeC
Confidence 888766 9999999999999999999999999999976 378999999999999 888999999
Q ss_pred CCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCC-CCCCCccHHHHHHHHHHHHH
Q psy1301 310 QNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSG-GRRSCMGNKMVQLISFTTLA 388 (429)
Q Consensus 310 ~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~-G~r~C~G~~~A~~e~~~~l~ 388 (429)
+|++++||.|||||.|+++.+++||||++|+||++|+|||+ +..++|||. |+|.|+|++||.+|++++++
T Consensus 331 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~---------~~~~lpFG~~G~r~C~G~~lA~~e~~~~la 401 (435)
T 2wm5_A 331 QDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARN---------PNPHLGFGGGGAHFCLGANLARREIRVAFD 401 (435)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCC---------SCCCCTTCSSSTTCCTTHHHHHHHHHHHHH
T ss_pred CCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCC---------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999993 146899999 99999999999999999999
Q ss_pred HHHHhcc-eeeCCCCCCcccccceeecCCceEEEE
Q psy1301 389 SLFQSYD-LKKLPGQQYKVPIGDLALPYNTFRFNF 422 (429)
Q Consensus 389 ~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (429)
.|+++|+ +++.++. ++....+...+.+++|++
T Consensus 402 ~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~ 434 (435)
T 2wm5_A 402 ELRRQMPDVVATEEP--ARLLSQFIHGIKTLPVTW 434 (435)
T ss_dssp HHHHHCTTCEECSCC--EECCCSSBCCEEECEEEC
T ss_pred HHHHhCCccEECCCc--cccccccccCccceeEEe
Confidence 9999997 9997532 222223444566777765
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=6.3e-50 Score=384.66 Aligned_cols=335 Identities=13% Similarity=0.118 Sum_probs=236.2
Q ss_pred CchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhhcCccccCCCCc--ccccc--------ccCCCCccccc
Q psy1301 47 EVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFVKATDFDGRPNI--SRYND--------LFSGNRENCKK 115 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~~~~~f~~r~~~--~~~~~--------~~~~~~~~~~~ 115 (429)
.+|+.++.+++++ |||+++.+ ++.++++|++++++++++++.. .|++++.. ..... .+.+.......
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCcccccC
Confidence 4799999999765 99999987 4577999999999999998763 57665411 11111 01111111122
Q ss_pred chHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHH------------HHH-------hcCCCcccccHHHHH
Q psy1301 116 LSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLL------------ERV-------YNNRDKAKMDLNTAL 175 (429)
Q Consensus 116 ~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~------------~~~-------~~~~~~~~~~~~~~~ 175 (429)
...|+ ++|+++.+.|+...+..+ ++.+.+.+ ++++.+. ... .++.+..... .+.
T Consensus 116 g~~h~-~~R~~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~--~~~ 189 (426)
T 3rwl_A 116 RPRHD-EQRKAVSPIVAPANLAAL---EGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLATLFDFPFEERR--KLT 189 (426)
T ss_dssp TTHHH-HHHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHHHHTCCGGGTH--HHH
T ss_pred chHHH-HHHHHhhhhhCHHHHHHH---HHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHcCCCHHHHH--HHH
Confidence 33488 889999999988888777 44444444 4443331 111 2333222211 222
Q ss_pred HhhhhhhcCcc-chhhhHHHhhhhccCChhHHHHH-----------------HHHHHHHHHHhcC--CcHHHHHHHHHHH
Q psy1301 176 FSLEDIVGGHT-AISNFIMKTLGFLVNHPNVQAKI-----------------QKEVDAITLRMSG--VHKLKVIFSLEDI 235 (429)
Q Consensus 176 ~~~~~~~~~~~-~~~~~~p~l~~~~~~~~~~~~~~-----------------~d~l~~ll~~~~~--~~~~~i~~~~~~l 235 (429)
.....+..... ........ ..+..+++ .|+++.+++...+ .+++++...+..+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~~~ls~~el~~~~~~l 262 (426)
T 3rwl_A 190 RWSDVTTAAPGGGVVESWDQ-------RKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPATRNMTPEEYLGNVLLL 262 (426)
T ss_dssp HHHHHHTCCTTSSSCSSHHH-------HHHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHCGGGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCccccccHHH-------HHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhcccCCCCCHHHHHHHHHHH
Confidence 22111110000 00000000 00111112 2456666654332 2788888888877
Q ss_pred hh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCce
Q psy1301 236 VG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSS 313 (429)
Q Consensus 236 ~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~ 313 (429)
++ |+|||+++++|++++|++||++|+||++|+ +|+++||+|+||++| ++.++|.+.+|++
T Consensus 263 ~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E~------------------~~l~a~i~E~LRl~p~~~~~~R~~~~d~~ 324 (426)
T 3rwl_A 263 IVGGNDTTRNSMTGGVLALHKNPDQFAKLKANP------------------ALVETMVPEIIRWQTPLAHMRRTAIADSE 324 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBCCEEEEESSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHHHHHhcCccccCceecCCCeE
Confidence 66 999999999999999999999999999984 488999999999999 8889999999999
Q ss_pred ecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHh
Q psy1301 314 IGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQS 393 (429)
Q Consensus 314 l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~ 393 (429)
++||.||||+.|+++.+++||||++|+||++|+||||.+ ..++|||.|+|.|+|++||.+|++++++.|+++
T Consensus 325 l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~ 396 (426)
T 3rwl_A 325 LGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRP--------RQHLSFGFGIHRCVGNRLAEMQLRILWEEILTR 396 (426)
T ss_dssp ETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCT--------TCCSTTCCSTTSCSSHHHHHHHHHHHHHHHHTT
T ss_pred ECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCC--------CCccCCCCCCcCCccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999953 478999999999999999999999999999999
Q ss_pred c-ceeeCCCCCCcccccceeecCCceEEEEEe
Q psy1301 394 Y-DLKKLPGQQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 394 f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
| ++++.++..+ ........++.++|+++|
T Consensus 397 f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~P 426 (426)
T 3rwl_A 397 FSRIEVMAEPER--VRSNFVRGYAKMMVRVHA 426 (426)
T ss_dssp CSEEEECSCCEE--CCCSSBCCEEECEEEEEC
T ss_pred CccCeeCCCCcc--cccccccCcceeeEEEeC
Confidence 9 9999754322 222344557788998875
No 69
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=1.4e-49 Score=378.04 Aligned_cols=331 Identities=11% Similarity=0.151 Sum_probs=234.2
Q ss_pred chHHHHHHHHHhcCCeeEEeeCC----ccEEEEcChHHHHHHHhhcCccccCCCCcccccc-ccCCCCcccccchHHHHH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLGV----VPAIVVNGLENIKEVLFVKATDFDGRPNISRYND-LFSGNRENCKKLSQMSKA 122 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg~----~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~-~~~~~~~~~~~~~~w~~~ 122 (429)
+|+.++.+| ++||||+++++++ .++|+|+||+++++++.+ ...|++++....... ...+..........|+ +
T Consensus 13 ~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~ 89 (384)
T 3oo3_A 13 DPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILAD-HERFSSMRPVDDEADRALLPGILQAYDPPDHT-R 89 (384)
T ss_dssp EECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHC-TTTEECSCCCC-----CCCTTCGGGCCTTHHH-H
T ss_pred ChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhC-chhccCCccccccccccccccccccCCChhHH-H
Confidence 999999999 5999999999986 899999999999999954 458888765442211 1111111112233487 8
Q ss_pred HHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHH-----hhhhhhcCcc--chhhhHHH
Q psy1301 123 IRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALF-----SLEDIVGGHT--AISNFIMK 194 (429)
Q Consensus 123 lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~p~ 194 (429)
+|+.+.+.|+...+..+ .+.+.+++ ++++.+... +. ..++. ..+.. .+.. ..|.. ....+..+
T Consensus 90 ~R~~~~~~fs~~~l~~~---~~~i~~~~~~l~~~l~~~---~~-~~d~~-~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~ 160 (384)
T 3oo3_A 90 LRRTVAPAYSARRMERL---RPRIEEIVEECLDDFESV---GA-PVDFV-RHAAWPIPAYIACE-FLGVPRDDQAELSRM 160 (384)
T ss_dssp HHHHHGGGGCHHHHHHH---HHHHHHHHHHHHHHHHHS---CS-SEEHH-HHTTTHHHHHHHHH-HHTCCGGGHHHHHHH
T ss_pred HHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHHHHhc---CC-CccHH-HHHHHHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence 89999998988888888 66677777 777776542 11 00000 00000 0001 11110 00011111
Q ss_pred hhhhc--cCCh---hHHHHH----------------HHHHHHHHHHhc-CCcHHHHHHHHHHHhh-cchhHHHHHHHHHH
Q psy1301 195 TLGFL--VNHP---NVQAKI----------------QKEVDAITLRMS-GVHKLKVIFSLEDIVG-GHTAISNFIMKTLG 251 (429)
Q Consensus 195 l~~~~--~~~~---~~~~~~----------------~d~l~~ll~~~~-~~~~~~i~~~~~~l~~-G~dtts~tl~w~l~ 251 (429)
....+ .... +..+.+ .|+++.++.... ..+++++...+.++++ |+|||+++++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~l~~ll~~~~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~ 240 (384)
T 3oo3_A 161 IRESRESRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMIGVIVREHGAEISDEELAGLAEGNLIMAAEQMAAQLAVAVL 240 (384)
T ss_dssp HHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhcCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 10000 0000 011111 256666765422 2378888888888766 99999999999999
Q ss_pred HHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCC-CccccCCCceecCEEeCCCCEEeech
Q psy1301 252 FLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPI-VPHVATQNSSIGGFEVKKDTMIFLNN 329 (429)
Q Consensus 252 ~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~-~~R~~~~d~~l~g~~ipkGt~v~~~~ 329 (429)
+|++||++|+|+++|++. ++|||+|+||++| ++. ++|.+.+|++++||.|||||.|+++.
T Consensus 241 ~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~ 302 (384)
T 3oo3_A 241 LLVTHPDQMALLREKPEL------------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSM 302 (384)
T ss_dssp HHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCEEEECH
T ss_pred HHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCEEEEeh
Confidence 999999999999999876 6999999999999 876 99999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCC-CCccc
Q psy1301 330 YDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQ-QYKVP 407 (429)
Q Consensus 330 ~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~-~~~~~ 407 (429)
+++|| +||++|+|||| +..++|||.|+|.|+|++||.+|++++++.|+++| +++++++. ++++.
T Consensus 303 ~~~~r-----~dp~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~ 368 (384)
T 3oo3_A 303 LATNR-----APGDRFDITRE---------KATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFK 368 (384)
T ss_dssp HHHHC-----CTTCCCCTTCS---------CCCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEE
T ss_pred hhcCC-----CCcceeCCCCC---------CCCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceee
Confidence 99999 99999999995 35799999999999999999999999999999999 99998653 23332
Q ss_pred c-cceeecCCceEEEE
Q psy1301 408 I-GDLALPYNTFRFNF 422 (429)
Q Consensus 408 ~-~~~~~~~~~~~~~~ 422 (429)
. ..+...+..++|++
T Consensus 369 ~~~~~~~~~~~lpv~~ 384 (384)
T 3oo3_A 369 PGRPAPFAVEELPLEW 384 (384)
T ss_dssp CSSSSCCEESCCEEEC
T ss_pred cccccccCcceeeeeC
Confidence 2 34455577777763
No 70
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=8.6e-49 Score=375.13 Aligned_cols=354 Identities=14% Similarity=0.172 Sum_probs=243.3
Q ss_pred CCCCCeecc---ccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccc--ccc-
Q psy1301 31 PWALPIIGH---LHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISR--YND- 104 (429)
Q Consensus 31 P~~~P~lG~---~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~--~~~- 104 (429)
+.++|.+|- -..+.. ||+.++.+++ ++|||++ +++..+++|+++++|++++.+.. .|++...... ...
T Consensus 17 ~~~~P~~~~dp~~~~~~~--dP~~~~~~lR-~~gPV~~--~~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~ 90 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDYFA--DPYPEQETLR-EAGPVVY--LDKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKE 90 (412)
T ss_dssp STTSCEECCCTTSHHHHH--SCHHHHHHHH-HHCSSEE--ETTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTS
T ss_pred CCCCCccCCCCCCHHHHh--CcHHHHHHHH-hcCCEEE--ECCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccc
Confidence 456888882 234555 8999999985 6899975 45678999999999999998764 5544322111 111
Q ss_pred --ccCCCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-hcCCCcccccHHHHHHhhhh
Q psy1301 105 --LFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-YNNRDKAKMDLNTALFSLED 180 (429)
Q Consensus 105 --~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 180 (429)
...+..........|+ ++|+.+.+.|+...++.+ ++.+.+.+ ++++.+.... .++. -.++...-....+..
T Consensus 91 ~~~~~~~~~~~~Dg~~H~-r~R~~~~~~Fs~~~l~~~---~~~i~~~~~~l~~~~~~~~~~~D~-v~~~~~~~~~~~i~~ 165 (412)
T 4dnj_A 91 KPWRPPSLILEADPPAHT-RTRAVLSKVLSPATMKRL---RDGFAAAADAKIDELLARGGNIDA-IADLAEAYPLSVFPD 165 (412)
T ss_dssp CCSSCCCTTTTCCTTHHH-HHHHHHHHHTCHHHHHHH---HHHHHHHHHHHHHHHHHTTSEEET-CCCCCCHHHHHHHHH
T ss_pred ccccCCCccccCChHHHH-HHHhhcccccCHHHHHHh---hHHHHHHHHHHHHhhhccCCCcee-HHHHHhhhhHhHHHH
Confidence 1111100112233487 889999999999999988 77777777 7777776542 1110 000110011112222
Q ss_pred hhcCcc-chhhhHHHh---hhhccCChh-----------HHHHH----------HHHHHHHHHHhcC---CcHHHHHHHH
Q psy1301 181 IVGGHT-AISNFIMKT---LGFLVNHPN-----------VQAKI----------QKEVDAITLRMSG---VHKLKVIFSL 232 (429)
Q Consensus 181 ~~~~~~-~~~~~~p~l---~~~~~~~~~-----------~~~~~----------~d~l~~ll~~~~~---~~~~~i~~~~ 232 (429)
+..... ....+..+. ......... ....+ .+.+..++....+ .+++++..++
T Consensus 166 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~e~~~~~ 245 (412)
T 4dnj_A 166 AMGLKQEGRENLLPYAGLVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNLAPGGFGACIHAFSDTGEITPEEAPLLV 245 (412)
T ss_dssp HHTCCSTTGGGHHHHHHHHHHHTSCSSHHHHHHHHTCHHHHHHHHHHTSGGGSCTTSHHHHHHHTTTTTSSCTTHHHHHH
T ss_pred HcCCchhhhhhhhhhhhcccccccccHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhHhhhhccchhHHHHHHHH
Confidence 211000 001111111 011111100 00000 1233444433222 2777787777
Q ss_pred HHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCC
Q psy1301 233 EDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQ 310 (429)
Q Consensus 233 ~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~ 310 (429)
.++++ |+|||+++++|++++|++||++|+||++|. .|+.++++|++|++| ++.++|.+.+
T Consensus 246 ~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~~------------------~~~~~~~eE~lR~~pp~~~~~R~a~~ 307 (412)
T 4dnj_A 246 RSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRADP------------------SLARNAFEEAVRFESPVQTFFRTTTR 307 (412)
T ss_dssp HHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBCEEEEEESS
T ss_pred HHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhCc------------------cccccccceeeeecCCcccccccCCC
Confidence 77766 999999999999999999999999999762 466899999999999 7889999999
Q ss_pred CceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHH
Q psy1301 311 NSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASL 390 (429)
Q Consensus 311 d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~l 390 (429)
|++|+||.||||+.|+++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|
T Consensus 308 d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~---------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~L 378 (412)
T 4dnj_A 308 DVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKT---------SGHVGFGSGVHMCVGQLVARLEGEVVLAAL 378 (412)
T ss_dssp CEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCC---------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHH
T ss_pred CeEECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCC---------CCCCCcCCCCcCChhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999974 468999999999999999999999999999
Q ss_pred HHhc-ceeeCCCCCCcccccceeecCCceEEEEEe
Q psy1301 391 FQSY-DLKKLPGQQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 391 l~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
+++| ++++.+.. +.....+...+++++|+++|
T Consensus 379 l~rf~~~~l~~~~--~~~~~~~~rg~~~LpV~~tP 411 (412)
T 4dnj_A 379 ARKVAAIEIAGPL--KRRFNNTLRGLESLPIQLTP 411 (412)
T ss_dssp HHHEEEEEECSCC--EEEECSSBEEEEECEEEEEE
T ss_pred HHHCCCCeECCCC--eeecCCCccCCcceeEEEEe
Confidence 9999 89987542 22222344557899999987
No 71
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=2e-49 Score=374.56 Aligned_cols=323 Identities=12% Similarity=0.156 Sum_probs=228.3
Q ss_pred hHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCC-----cccc--ccc-cC--C-CCcccccch
Q psy1301 49 PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPN-----ISRY--NDL-FS--G-NRENCKKLS 117 (429)
Q Consensus 49 ~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~-----~~~~--~~~-~~--~-~~~~~~~~~ 117 (429)
|+..+.++ ++||||+++ | +.++|+|++++++++.++. .|++++. +... ... ++ . .........
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 74 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP 74 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCCCh
Confidence 57788888 599999987 4 5899999999999999753 6887764 1101 110 11 1 211112233
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCCCcccccHHHHHHh
Q psy1301 118 QMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNRDKAKMDLNTALFS 177 (429)
Q Consensus 118 ~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~~~~~~~~~~~~~~ 177 (429)
.|+ ++|+.+.+.|+...+..+ ++.+.+++ ++++.+ ... .++.+..... .+...
T Consensus 75 ~h~-~~R~~~~~~f~~~~~~~~---~~~i~~~~~~l~~~l-~~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~~~ 147 (368)
T 1io7_A 75 LHD-ELRSMSADIFSPQKLQTL---ETFIRETTRSLLDSI-DPREDDIVKKLAVPLPIIVISKILGLPIEDKE--KFKEW 147 (368)
T ss_dssp HHH-HHHGGGTTTTCHHHHHHH---HHHHHHHHHHHHHTC-CTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHH--HHHHH
T ss_pred HHH-HHHHHHHhhcCHHHHHHH---HHHHHHHHHHHHHHh-hcCCccHHHHHHHHHHHHHHHHHhCCCHHHHH--HHHHH
Confidence 488 889998888888777777 55555555 555544 210 1222111111 11111
Q ss_pred hhhhhcCccchhhhHHHhhhhccCChhHHHHH-----------HHHHHHHHHHhcCCcHHHHHHHHHHHhh-cchhHHHH
Q psy1301 178 LEDIVGGHTAISNFIMKTLGFLVNHPNVQAKI-----------QKEVDAITLRMSGVHKLKVIFSLEDIVG-GHTAISNF 245 (429)
Q Consensus 178 ~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~-----------~d~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dtts~t 245 (429)
...+..... .|...+ ...+..+.+ .|+++.+++. ..+++++..++.++++ |+|||+++
T Consensus 148 ~~~~~~~~~-----~p~~~~---~~~~~~~~~~~~~~~~i~~~~d~l~~ll~~--~l~~~ei~~~~~~l~~AG~dTt~~~ 217 (368)
T 1io7_A 148 SDLVAFRLG-----KPGEIF---ELGKKYLELIGYVKDHLNSGTEVVSRVVNS--NLSDIEKLGYIILLLIAGNETTTNL 217 (368)
T ss_dssp GGGCTTSCC-----CTTCHH---HHHHHHHHHHHHHHHHTTSSCHHHHHHHTS--SCCHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHhccC-----ChHHHH---HHHHHHHHHHHHHHHHhCCCCCHHHHHHhc--cCCHHHHHHHHHHHHHhhhHHHHHH
Confidence 111110000 010000 000111111 2455666543 3478888888888876 99999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCE
Q psy1301 246 IMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTM 324 (429)
Q Consensus 246 l~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~ 324 (429)
++|++++|++|| +|+|+++| + |++|||+|+||++| ++.++|.+.+|++++||.|||||.
T Consensus 218 l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~ 277 (368)
T 1io7_A 218 ISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEY 277 (368)
T ss_dssp HHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCE
T ss_pred HHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHhCcccccCceeeCCCeeECCEEECCCCE
Confidence 999999999999 99999998 2 67999999999999 888999999999999999999999
Q ss_pred EeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcc-eeeCCCCC
Q psy1301 325 IFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYD-LKKLPGQQ 403 (429)
Q Consensus 325 v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~ 403 (429)
|+++.+++||||++|+||++|+|||+ +..++|||.|+|.|+|++||.+|++++++.|+++|+ +++.+
T Consensus 278 V~~~~~~~~rdp~~~~dP~~F~PeR~---------~~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~--- 345 (368)
T 1io7_A 278 VRVWIASANRDEEVFHDGEKFIPDRN---------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD--- 345 (368)
T ss_dssp EEECHHHHTTCTTTSTTTTSCCTTCC---------SCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE---
T ss_pred EEecHhhhCCChhhCCCcceeCCCCC---------CCCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC---
Confidence 99999999999999999999999993 136899999999999999999999999999999996 99875
Q ss_pred CcccccceeecCCceEEEEEeCC
Q psy1301 404 YKVPIGDLALPYNTFRFNFSPRN 426 (429)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~r~ 426 (429)
.++....+...+.+++|++++|.
T Consensus 346 ~~~~~~~~~~~~~~lpv~~~~r~ 368 (368)
T 1io7_A 346 TEKVPNEVLNGYKRLVVRLKSNE 368 (368)
T ss_dssp EEECCCSSBCCEEEEEEEEEC--
T ss_pred ceeccCCcccCCceeEEEeccCC
Confidence 22222344556779999999884
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=3.7e-49 Score=369.05 Aligned_cols=296 Identities=15% Similarity=0.171 Sum_probs=208.8
Q ss_pred HhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccccCCCCcccccchHHHHHHHHHHHhhhhhhhHH
Q psy1301 58 KTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIV 137 (429)
Q Consensus 58 ~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~ 137 (429)
++||||+++ | +++|+||+++++++.++. .|++++....... ++..........|+ ++|+.+.+.|+...+.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~--~~~~l~~~~g~~~~-~~R~~~~~~fs~~~l~ 72 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA--GGISFITMDNPEHK-EFRDISAPYFLPSKIN 72 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC-----CCGGGGCCHHHHH-HHHHHHHHHHSHHHHG
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc--cccccccCCchHHH-HHHHHhhhhcCHHHHH
Confidence 589999986 3 999999999999999764 6887753211111 12211111223388 8899998888877777
Q ss_pred HHhhhhhcccchh-hHHHHHH-------------HHH---hcCCCcccccHHHHHHhhhhhhcCccchhhhHHHhhhhcc
Q psy1301 138 KYERNERNNNDEE-DYVDSLL-------------ERV---YNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLV 200 (429)
Q Consensus 138 ~~~~~~~~~~~~~-~l~~~l~-------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~ 200 (429)
.+ ++.+.+++ ++++.+. ..+ .+|.+..... .+......+...... ...++. +. .
T Consensus 73 ~~---~~~i~~~~~~l~~~l~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~--~~~~~~~~~~~~~~p--~~~~~~-~~-~ 143 (343)
T 2rfb_A 73 DY---KDFIEETSNDLIKNIDNKDIISEYAVRLPVNIISKILGIPDSDMP--LFKLWSDYIIGNKRD--ENFNYV-NN-R 143 (343)
T ss_dssp GG---HHHHHHHHHHHHTTCTTSCHHHHTTTHHHHHHHHHHHTCCGGGHH--HHHHHHHHHHTSCCS--SHHHHH-HH-H
T ss_pred HH---HHHHHHHHHHHHHhccccCHHHHHhhhhhHHHHHHHcCCCHHHHH--HHHHHHHHHhhccCc--chhhHH-HH-H
Confidence 66 44333333 3332221 000 1343322211 333333332211110 000000 00 0
Q ss_pred CChhHHHHH-----HHHHHHHHHHhcC---CcHHHHHHHHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Q psy1301 201 NHPNVQAKI-----QKEVDAITLRMSG---VHKLKVIFSLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAIT 271 (429)
Q Consensus 201 ~~~~~~~~~-----~d~l~~ll~~~~~---~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~ 271 (429)
...++.+.+ .| ++.+++...+ .+++++...+.++++ |+|||+++++|++++|++||++|+|+++|+
T Consensus 144 ~~~~~~~~~~~~i~~d-l~~ll~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~---- 218 (343)
T 2rfb_A 144 MVSRLLEIFKSDSHGI-INVLAGSSLKNRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR---- 218 (343)
T ss_dssp HHHHHHHHHHSCCSSH-HHHHHTCBCSSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH----
T ss_pred HHHHHHHHHHHHHhcc-HHHHHhhhcCCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc----
Confidence 001111111 24 6677754321 378889888888876 999999999999999999999999999985
Q ss_pred ccCCCCChhhhcCChhHHHHHHhhhcCcC-C-CCCccccCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCC
Q psy1301 272 LISRDVTLADRKQMPYTEATILESIRMIA-S-PIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPER 349 (429)
Q Consensus 272 ~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~-~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeR 349 (429)
+|||+|+||++| + +.++|.+.+|++++||.|||||.|+++.+++||||++|+||++|+|||
T Consensus 219 -----------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR 281 (343)
T 2rfb_A 219 -----------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281 (343)
T ss_dssp -----------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC
T ss_pred -----------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEEEEChhhhCCCcccCCCccccCCCC
Confidence 799999999999 8 889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcc-eeeCCCCC
Q psy1301 350 FINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYD-LKKLPGQQ 403 (429)
Q Consensus 350 fl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~ 403 (429)
+ ..++|||.|+|.|+|++||++|++++++.|+++|+ +++.++.+
T Consensus 282 ~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~ 326 (343)
T 2rfb_A 282 R----------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKS 326 (343)
T ss_dssp S----------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTC
T ss_pred C----------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCcc
Confidence 4 25899999999999999999999999999999996 99987543
No 73
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=2e-48 Score=367.22 Aligned_cols=323 Identities=12% Similarity=0.111 Sum_probs=224.1
Q ss_pred hHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCC-cc-cc-----c-cccC---CCCcccccch
Q psy1301 49 PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPN-IS-RY-----N-DLFS---GNRENCKKLS 117 (429)
Q Consensus 49 ~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~-~~-~~-----~-~~~~---~~~~~~~~~~ 117 (429)
|+..+.++ ++|||||+++ | +++|++|+++++++.+++ .|++++. +. .+ . .+.+ +.........
T Consensus 1 p~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 74 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP 74 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCch
Confidence 56788888 5899999998 3 899999999999999764 7877642 22 12 2 2222 1211122333
Q ss_pred HHHHHHHHHHHhhhhhhhHHH--Hhhh----hhcccchhhHHHHH----HHHH---hcCCCcccccHHHHHHhhhhhhcC
Q psy1301 118 QMSKAIRAFVMENLMNDRIVK--YERN----ERNNNDEEDYVDSL----LERV---YNNRDKAKMDLNTALFSLEDIVGG 184 (429)
Q Consensus 118 ~w~~~lR~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~l----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 184 (429)
.|+ ++|+.+.+.|+...+.. +... .....+++++...+ ...+ .++.+ .+.. .+......+...
T Consensus 75 ~h~-~~R~~~~~~fs~~~l~~~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~~~G~~-~~~~--~~~~~~~~~~~~ 150 (367)
T 3b4x_A 75 LHD-ELRNLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGIN-PDVK--KVKDWSDLVALR 150 (367)
T ss_dssp HHH-HHHHTTGGGGSGGGSCHHHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHHHHTCC-CCHH--HHHHHHHHHHTT
T ss_pred hHH-HHHHHHHHhcCHhhhcchHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHHHcCCC-CcHH--HHHHHHHHHHhc
Confidence 488 88998888877655432 1000 00000111222111 1111 34443 2222 333333333221
Q ss_pred ccchhhhHHHhhhhccCChhHHHHHH----------------HHHHHHHHHhcCCcHHHHHHHHHHHhh-cchhHHHHHH
Q psy1301 185 HTAISNFIMKTLGFLVNHPNVQAKIQ----------------KEVDAITLRMSGVHKLKVIFSLEDIVG-GHTAISNFIM 247 (429)
Q Consensus 185 ~~~~~~~~p~l~~~~~~~~~~~~~~~----------------d~l~~ll~~~~~~~~~~i~~~~~~l~~-G~dtts~tl~ 247 (429)
... .|.+ .... +..+.+. |+++.+++. ..+++++...+.++++ |+|||+++++
T Consensus 151 ~~~----~p~~---~~~~-~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~--~ls~~el~~~~~~l~~AG~eTt~~~l~ 220 (367)
T 3b4x_A 151 LGR----ADEI---FSIG-RKYLELISFSKKELDSRKGKEIVDLTGKIANS--NLSELEKEGYFILLMIAGNETTTNLIG 220 (367)
T ss_dssp TTS----TTGG---GCCC-HHHHHHHHHHHHHHHHHTTTCCSSHHHHHHTS--SSCHHHHHHHHHHHHHTTTHHHHHHHH
T ss_pred cCC----Chhh---HHHH-HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhc--cCCHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 110 1211 0111 2233333 344444433 3478888888888876 9999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEe
Q psy1301 248 KTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIF 326 (429)
Q Consensus 248 w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~ 326 (429)
|++++|++ |++|+||++|++ ++||+|+||++| ++.++|.+.+|++++||.|||||.|+
T Consensus 221 ~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~ 279 (367)
T 3b4x_A 221 NAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVR 279 (367)
T ss_dssp HHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEE
T ss_pred HHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHhcCcccCeeEEeCCCeEECCEEECCCCEEE
Confidence 99999999 999999999954 799999999999 88899999999999999999999999
Q ss_pred echhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCCc
Q psy1301 327 LNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQYK 405 (429)
Q Consensus 327 ~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~ 405 (429)
++.+++||||++|+||++|+||||. ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .+.
T Consensus 280 ~~~~~~~rdp~~~~dp~~F~PeR~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~ 349 (367)
T 3b4x_A 280 VWIASANRDEEVFKDPDSFIPDRTP---------NPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK-EKI 349 (367)
T ss_dssp ECHHHHTTCTTTSSSTTSCCTTCSS---------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-EEC
T ss_pred EChhhhcCCcccCCCccccCCCCCC---------CCCcCCCCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc-ccc
Confidence 9999999999999999999999984 3689999999999999999999999999999999 7999764 322
Q ss_pred ccccceeecCCceEEEEEe
Q psy1301 406 VPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~ 424 (429)
...+...+.+++|++.+
T Consensus 350 --~~~~~~~~~~lpv~~~~ 366 (367)
T 3b4x_A 350 --DNEVLNGYRKLVVRVER 366 (367)
T ss_dssp --CCSSBCSEEEEEEEEEE
T ss_pred --ccccccCcceEEEEecC
Confidence 22344557788888854
No 74
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=1.7e-48 Score=371.17 Aligned_cols=336 Identities=16% Similarity=0.231 Sum_probs=229.1
Q ss_pred chHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccc-cCCCCcccccchHHHHHHHHH
Q psy1301 48 VPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDL-FSGNRENCKKLSQMSKAIRAF 126 (429)
Q Consensus 48 ~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~-~~~~~~~~~~~~~w~~~lR~~ 126 (429)
+|+..+.++++ +|||+++..| .++|++++++++++.++ .|+.++.+...... ..+..........|+ ++|++
T Consensus 21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~-~~R~~ 93 (394)
T 2wiy_A 21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHT-VLRRQ 93 (394)
T ss_dssp CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHH-HHHHH
T ss_pred CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHH-HHHHH
Confidence 89999999865 5899988653 79999999999999765 46544322111111 111111112233488 88999
Q ss_pred HHhhhhhhhHHHHhhhhhcccchh-hHHHHHH-------------------HHHhcCCCcccccHHHHHHhhhhhh-cC-
Q psy1301 127 VMENLMNDRIVKYERNERNNNDEE-DYVDSLL-------------------ERVYNNRDKAKMDLNTALFSLEDIV-GG- 184 (429)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 184 (429)
+.+.|+...+..+ ++.+.+.+ ++++.+. ....++.+.++.. .+...+.... ..
T Consensus 94 ~~~~fs~~~~~~~---~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~--~~~~~~~~~~~~~~ 168 (394)
T 2wiy_A 94 TNKWFTPKLVDGW---VRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDAD--AVMEAMFEAMLMQS 168 (394)
T ss_dssp HHTTCSHHHHHHH---THHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHH--HHHHHHHHHHGGGS
T ss_pred HHhccCHHHHHHH---HHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHH--HHHHHHHHHHHhcc
Confidence 9998888887777 33333333 3333221 1113444332222 3333222111 00
Q ss_pred ccchhhhHHHh---hhhccC--ChhHHHHH----HHHHHHHHHHhcC--CcHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Q psy1301 185 HTAISNFIMKT---LGFLVN--HPNVQAKI----QKEVDAITLRMSG--VHKLKVIFSLEDIVG-GHTAISNFIMKTLGF 252 (429)
Q Consensus 185 ~~~~~~~~p~l---~~~~~~--~~~~~~~~----~d~l~~ll~~~~~--~~~~~i~~~~~~l~~-G~dtts~tl~w~l~~ 252 (429)
.......+... ...+.. ...+.++. .|+++.+++...+ .+++++...+.++++ |+|||+++++|++++
T Consensus 169 ~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~Ll~~~~~~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~ 248 (394)
T 2wiy_A 169 AEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEAIATILVFYAVGHMAIGYLIASGIEL 248 (394)
T ss_dssp SSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHhhhcCCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 00000000000 000000 00011111 2567777754332 378888888877766 999999999999999
Q ss_pred HhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechhh
Q psy1301 253 LVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNYD 331 (429)
Q Consensus 253 L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~~ 331 (429)
|++||++|++|++|+ .|+++||+|+||++| ++.++|.+.+|++++||.||||+.|+++.++
T Consensus 249 L~~~P~~~~~l~~e~------------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~ 310 (394)
T 2wiy_A 249 FARRPEVFTAFRNDE------------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGA 310 (394)
T ss_dssp HHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEECTTCCEEEEHHH
T ss_pred HHHCHHHHHHHHhCh------------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcCeecCCCCEEEeChHh
Confidence 999999999999985 367999999999999 8789999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhcc-eeeCCCCCCcccccc
Q psy1301 332 LNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYD-LKKLPGQQYKVPIGD 410 (429)
Q Consensus 332 ~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f~-~~~~~~~~~~~~~~~ 410 (429)
+||||++|+||++||||||++. ..++|||.|+|.|+|++||++|++++++.|+++|+ ++++++.. +....
T Consensus 311 ~~rdp~~~~dP~~F~p~R~~~~-------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~--~~~~~ 381 (394)
T 2wiy_A 311 ANRDPEVFDDPDVFDHTRPPAA-------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELAEEPT--VAHND 381 (394)
T ss_dssp HTTCTTTSSSTTSCCTTCCGGG-------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCEEESSCCE--ECCCS
T ss_pred hcCCcccCCCccccCCCCCCCC-------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCceECCCCc--ccccc
Confidence 9999999999999999999842 36899999999999999999999999999999998 99975432 21222
Q ss_pred eeecCCceEEEE
Q psy1301 411 LALPYNTFRFNF 422 (429)
Q Consensus 411 ~~~~~~~~~~~~ 422 (429)
+...+..++|++
T Consensus 382 ~~~g~~~lpv~~ 393 (394)
T 2wiy_A 382 FARRYRKLPIVL 393 (394)
T ss_dssp SBCCEEECEEEE
T ss_pred cccCcceeeEEe
Confidence 344566777775
No 75
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=1.1e-48 Score=375.33 Aligned_cols=349 Identities=11% Similarity=0.086 Sum_probs=236.4
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCccccccccC----
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFS---- 107 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~~~~---- 107 (429)
..+|.+++.. . .+|+.+ .++ ++||||+++.+|+.. ++|+++++++++++++...+..+. ......+..
T Consensus 22 ~~lp~~~~~~--~--~~P~~~-~~l-r~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~-~~~~~~~~~~~~~ 93 (416)
T 3p3o_A 22 ADLPFLDFTD--P--NFSWDS-PEV-AEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRG-LVDMVGTPEGPVR 93 (416)
T ss_dssp TTCCBCCTTS--T--TCCTTS-HHH-HHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHH-HHHHHTCCSSHHH
T ss_pred cCCCCCCccc--c--cCCchH-HHH-HHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCcc-ccccccccccchh
Confidence 4456655543 3 378888 555 689999999997766 999999999999988742222110 000000000
Q ss_pred ---CCCcccccchHHHHHHHHHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHH-------------------hcCC
Q psy1301 108 ---GNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERV-------------------YNNR 164 (429)
Q Consensus 108 ---~~~~~~~~~~~w~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~-------------------~~~~ 164 (429)
+..........|+ ++|+.+.+.|+...+..+ .+.+.+.+ ++++.+ ... .++.
T Consensus 94 ~~~~~~l~~~dg~~h~-~~Rr~~~~~fs~~~l~~~---~~~i~~~~~~ll~~l-~~g~~d~~~~~~~~~~~~vi~~l~G~ 168 (416)
T 3p3o_A 94 DFMVDFLQSLDGADHR-RLRGLATHPFTPRRITAV---QPFVRSTVEQLIDKL-PQGDFDFVQHFPHPLPALVMCQLLGF 168 (416)
T ss_dssp HHHHHSGGGCCHHHHH-HHHHTTCGGGSHHHHHHH---HHHHHHHHHHHHHTC-CSSSEEHHHHTTTHHHHHHHHHHHTC
T ss_pred hhhcCccccCCchHHH-HHHHHHHHhhCHHHHHHH---HHHHHHHHHHHHHhh-ccCCccHHHHHHHHHHHHHHHHHhCC
Confidence 0100112233388 889999998988888887 55555555 555544 110 1232
Q ss_pred CcccccHHHHHHhhhhhhcCccchhhhHHHhhhhccCChh--------HHHHH----HHHHHHHHHHhcC--CcHHHHHH
Q psy1301 165 DKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPN--------VQAKI----QKEVDAITLRMSG--VHKLKVIF 230 (429)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~--------~~~~~----~d~l~~ll~~~~~--~~~~~i~~ 230 (429)
+..... .+......+...... ...............+ ++++. .|+++.+++...+ .+++++..
T Consensus 169 ~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~~~~ls~~el~~ 245 (416)
T 3p3o_A 169 PLEDYD--TVGRLSIETNLGLAL-SNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRT 245 (416)
T ss_dssp CGGGHH--HHHHHHHTTCGGGTT-CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHTTSSCHHHHHH
T ss_pred CHHHHH--HHHHHHHHHHhhccc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhccCCCCHHHHHH
Confidence 222111 222222222110000 0000000000000000 11111 2566777755332 37888888
Q ss_pred HHHHHhh-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-C-CCCccc
Q psy1301 231 SLEDIVG-GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-S-PIVPHV 307 (429)
Q Consensus 231 ~~~~l~~-G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~-~~~~R~ 307 (429)
.+.++++ |+|||+++++|++++|++||++|+||++|++ |+++||+|+||++| + ..++|.
T Consensus 246 ~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~a~i~E~lRl~p~~~~~~~R~ 307 (416)
T 3p3o_A 246 LVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE------------------LAPQAVEEVLRWSPTLPVTATRV 307 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHHHHHHHHHSCSCSSCCEEE
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhccccccCcceE
Confidence 8888776 9999999999999999999999999999864 77999999999999 7 459999
Q ss_pred cCCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHH
Q psy1301 308 ATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTL 387 (429)
Q Consensus 308 ~~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l 387 (429)
+.+|++++||.||||+.|+++.+++||||++|+||++|||+||.+ ..++|||.|+|.|+|++||++|+++++
T Consensus 308 ~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~--------~~~l~FG~G~r~C~G~~lA~~e~~~~l 379 (416)
T 3p3o_A 308 AAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKRE--------APSIAFGGGPHFCLGTALARLELTEAV 379 (416)
T ss_dssp ESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCS--------SCCCTTCCSTTSCTTHHHHHHHHHHHH
T ss_pred eCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCC--------CCeecCCCCCccCcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999742 368999999999999999999999999
Q ss_pred HHHHHhc-ceeeCCCCCCcccccceeecCCceEEEEEe
Q psy1301 388 ASLFQSY-DLKKLPGQQYKVPIGDLALPYNTFRFNFSP 424 (429)
Q Consensus 388 ~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (429)
+.|+++| ++++.++.. +........+..++|++.|
T Consensus 380 ~~ll~~f~~~~l~~~~~--~~~~~~~~g~~~lpv~~~p 415 (416)
T 3p3o_A 380 AALATRLDPPQIAGEIT--WRHELGVAGPDALPLRFGA 415 (416)
T ss_dssp HHHHHHSCCEEECSCCE--ECCCTTCCCEEECEEEESC
T ss_pred HHHHHhCCccccCCCCc--eecCCCccCcceeeEEEec
Confidence 9999999 488765432 2222344556788888754
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=5.8e-43 Score=334.30 Aligned_cols=340 Identities=13% Similarity=0.084 Sum_probs=224.2
Q ss_pred CchHHHHHHHHHhcC-CeeEEeeCCccEEEEcChHHHHHHHhhcCccccCCCCcccccc-ccCCCCcccccchHHHHHHH
Q psy1301 47 EVPYQAFKVISKTHG-SIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYND-LFSGNRENCKKLSQMSKAIR 124 (429)
Q Consensus 47 ~~~~~~~~~~~~~yG-~if~i~lg~~~~vvv~~p~~i~~il~~~~~~f~~r~~~~~~~~-~~~~~~~~~~~~~~w~~~lR 124 (429)
.+||..+.+++++.+ +++....+| ..++|+++++|++++.+.. .|+++........ .........+...+|+ ++|
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~-r~R 113 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMDPPEHT-PYR 113 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCCTTTHH-HHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCCcHHHH-HHH
Confidence 489999999865544 466554443 5789999999999998754 6766533221111 0111100112223487 889
Q ss_pred HHHHhhhhhhhHHHHhhhhhcccchh-hHHHHHHHHHhcCCCcccccHHHHHHhhhhhhcCc-cchhhhHHHh---hhhc
Q psy1301 125 AFVMENLMNDRIVKYERNERNNNDEE-DYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGH-TAISNFIMKT---LGFL 199 (429)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~l---~~~~ 199 (429)
+.+++.|+...+..+ ++.+.+.+ ++++.+.....++. -..+...-....+..+.... .....+..+. ....
T Consensus 114 rll~~~Fs~~~l~~~---~~~i~~~~~~lld~l~~~g~~D~-v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~~~ 189 (417)
T 4dxy_A 114 KALDKGLNLAKIRKV---EDKVREVASSLIDSFAARGECDF-AAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTRPE 189 (417)
T ss_dssp HHHHHHHCHHHHHTT---HHHHHHHHHHHHHHHHTTSEEEH-HHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCC
T ss_pred HHhhhhcCHHHHHHH---HHHHHHHHHHHHHHhhhcCCeee-HHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhcccc
Confidence 999999999999888 77777767 77777654321100 00000000001111111000 0000111111 0000
Q ss_pred cCC--------hhHHHHHHHHHHHHHHH----------------hcCC---cHHHHHHHHHHHhh-cchhHHHHHHHHHH
Q psy1301 200 VNH--------PNVQAKIQKEVDAITLR----------------MSGV---HKLKVIFSLEDIVG-GHTAISNFIMKTLG 251 (429)
Q Consensus 200 ~~~--------~~~~~~~~d~l~~ll~~----------------~~~~---~~~~i~~~~~~l~~-G~dtts~tl~w~l~ 251 (429)
... ....+.+.++++.++.+ ..+. +++++...+..+++ |+|||+++++|+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~~ddl~s~L~~~~~~~~~~~~~e~~~~~~~ll~AG~eTTa~~l~~~~~ 269 (417)
T 4dxy_A 190 GNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEINGERIAHDKAQGLISLLLLGGLDTVVNFLSFFMI 269 (417)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTCEETTEECCHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhccccccCCccchhHHHHHHHHHHhhcccchhhHHHHHHH
Confidence 000 01122223333333332 2111 78888888877766 99999999999999
Q ss_pred HHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCccccCCCceecCEEeCCCCEEeechh
Q psy1301 252 FLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVATQNSSIGGFEVKKDTMIFLNNY 330 (429)
Q Consensus 252 ~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~~~d~~l~g~~ipkGt~v~~~~~ 330 (429)
+|++||++++++++|.+.+. .+ .|.+|+++ ++.+.|.+.+|++++|+.||||+.|.++.+
T Consensus 270 ~L~~~P~~~~~l~~e~~~~~------------------~a-vee~~~~~~~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~ 330 (417)
T 4dxy_A 270 HLARHPELVAELRSDPLKLM------------------RG-AEEMFRRFPVVSEARMVAKDQEYKGVFLKRGDMILLPTA 330 (417)
T ss_dssp HHHTCHHHHHHHHHCHHHHH------------------HT-HHHHHHHSCCBEEEEEECSCEEETTEEECTTCEEEEETH
T ss_pred HHHhCchhhhhhccCccccc------------------cc-eeeeeccccccccccccccceEecCccccCCCEEEEeeh
Confidence 99999999999999866542 22 34455555 556899999999999999999999999999
Q ss_pred hhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHHHHHHhc-ceeeCCCCCCccccc
Q psy1301 331 DLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSY-DLKKLPGQQYKVPIG 409 (429)
Q Consensus 331 ~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~~ll~~f-~~~~~~~~~~~~~~~ 409 (429)
++||||++|+||++|+|||+ +..++|||.|+|.|+|++||++|++++++.|+++| ++++.+++. .....
T Consensus 331 a~~rDp~~f~dP~~FdpeR~---------~~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp~~~l~~~~~-~~~~~ 400 (417)
T 4dxy_A 331 LHGLDDAANPEPWKLDFSRR---------SISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIPEFSFKEGET-PIYHS 400 (417)
T ss_dssp HHHTCTTTSSSTTSCCTTCS---------CCCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSSCEECTTCC-CEEEC
T ss_pred hhcCChhhCCCccccCCCCC---------CCCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCCCceeCCCCC-eeecC
Confidence 99999999999999999993 35789999999999999999999999999999999 999987643 23233
Q ss_pred ceeecCCceEEEE
Q psy1301 410 DLALPYNTFRFNF 422 (429)
Q Consensus 410 ~~~~~~~~~~~~~ 422 (429)
+++..++.++|++
T Consensus 401 ~~~~g~~~LPv~~ 413 (417)
T 4dxy_A 401 GIVAAVENVPLVW 413 (417)
T ss_dssp SSBCEEECCEEEC
T ss_pred CcccCceeeeEEe
Confidence 4555677888886
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.7e-43 Score=330.97 Aligned_cols=145 Identities=14% Similarity=0.209 Sum_probs=124.5
Q ss_pred HHHHH-hhcchhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccCCCCChhhhcCChhHHHHHHhhhcCcC-CCCCcccc
Q psy1301 231 SLEDI-VGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIA-SPIVPHVA 308 (429)
Q Consensus 231 ~~~~l-~~G~dtts~tl~w~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~EtlRl~~-~~~~~R~~ 308 (429)
.+..+ ++|+|||+++++|++++|++||++|++|++|++ |+++||+|+||++| ++.++|.+
T Consensus 215 ~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~~------------------~l~~~i~E~LR~~pp~~~~~R~a 276 (381)
T 2yjn_B 215 PALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDPA------------------AAQRTVAEVLRLHPALHLERRTA 276 (381)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCC--------------------HHHHHHHHHHSCSCSEEEEEE
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCHH------------------HHHHHhCeeeeecCCCcceeEEE
Confidence 34444 449999999999999999999999999999853 88999999999999 77889999
Q ss_pred CCCceecCEEeCCCCEEeechhhhccCCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCCCCCccHHHHHHHHHHHHH
Q psy1301 309 TQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLA 388 (429)
Q Consensus 309 ~~d~~l~g~~ipkGt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~l~ 388 (429)
.+|++++|+.||||+.|+++.+++||||++|+||++|||+||++ ..++|||.| |.|+|++||++|++++++
T Consensus 277 ~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~--------~~~l~FG~G-h~C~G~~lA~~e~~~~l~ 347 (381)
T 2yjn_B 277 TAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDA--------DRALSAHRG-HPGRLEELVTALATAALR 347 (381)
T ss_dssp SSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCC--------CCCCC-----CCSSHHHHHHHHHHHHHH
T ss_pred CCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCC--------CCccCCCCC-CCCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999974 478999999 999999999999999999
Q ss_pred HHHHhc-ceeeCCCC
Q psy1301 389 SLFQSY-DLKKLPGQ 402 (429)
Q Consensus 389 ~ll~~f-~~~~~~~~ 402 (429)
.|+++| +++++++.
T Consensus 348 ~ll~~~p~~~l~~~~ 362 (381)
T 2yjn_B 348 AAAKALPGLTPSGPV 362 (381)
T ss_dssp HTTTTCCC-----CC
T ss_pred HHHHhCCCcEECCCC
Confidence 999999 99997654
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.98 E-value=1.8 Score=30.66 Aligned_cols=65 Identities=11% Similarity=0.083 Sum_probs=47.5
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcC-CeeEEeeCCccEEEEcChHHHHHHHhh-cCccccCCCCcc
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHG-SIFRLKLGVVPAIVVNGLENIKEVLFV-KATDFDGRPNIS 100 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG-~if~i~lg~~~~vvv~~p~~i~~il~~-~~~~f~~r~~~~ 100 (429)
-++||+..=.+-.+....+.++..+|| +|..+ .+|.-+|...+.+.++.++.+ ++..+-+|+...
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~v 78 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRIIV 78 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCEE
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEEE
Confidence 458998653221223446889999995 99998 579999999999999999876 555666665443
No 79
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=79.94 E-value=9.8 Score=25.55 Aligned_cols=59 Identities=8% Similarity=0.015 Sum_probs=41.2
Q ss_pred eeccccccCCCCc----hHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 36 IIGHLHLLGQYEV----PYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~----~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
++||+..-.. + -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 5 ~V~nLp~~~~--~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~lng~~~~g~ 75 (81)
T 2krb_A 5 VVDNVPQVGP--DRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 75 (81)
T ss_dssp EEESCCCCCT--TTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTTSSSCCCSSS
T ss_pred EEeCCCCCcH--HHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHHhcCcccCCc
Confidence 5777754221 2 346778888999999999875 3446778899999988875 44455443
No 80
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=79.12 E-value=11 Score=27.37 Aligned_cols=67 Identities=16% Similarity=0.143 Sum_probs=47.2
Q ss_pred CCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 26 DLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 26 ~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
+.||.|..--++||+..-. -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 2 r~~~~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 75 (115)
T 3lqv_A 2 RLPPEVNRILYIRNLPYKI----TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDHLSGFNVSNR 75 (115)
T ss_dssp -CCTTCCSEEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHHHTTCBSSSC
T ss_pred CCCCCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 3567777778999986522 234577888999999988872 3557888899988888874 55455444
No 81
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=74.77 E-value=11 Score=26.96 Aligned_cols=60 Identities=10% Similarity=0.144 Sum_probs=41.4
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
.--++||+..-- -...+.++..+||+|..+.+. |.-+|...+++.++.++..++..+.++
T Consensus 12 ~~lfV~~Lp~~~----te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~gr 79 (103)
T 1s79_A 12 RSVYIKGFPTDA----TLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET 79 (103)
T ss_dssp GCEEEECCCTTC----CHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTTT
T ss_pred CEEEEECCCCCC----CHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECCE
Confidence 345788875522 234577888999999888864 345678889999999987554444433
No 82
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=70.92 E-value=5.6 Score=29.30 Aligned_cols=72 Identities=7% Similarity=0.024 Sum_probs=48.2
Q ss_pred CCCCCCCCCeeccccccCCC------CchHHHHHHHHHhcCCeeEEeeC-----CccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 27 LTPMPWALPIIGHLHLLGQY------EVPYQAFKVISKTHGSIFRLKLG-----VVPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 27 ~ppgP~~~P~lG~~~~~~~~------~~~~~~~~~~~~~yG~if~i~lg-----~~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
.||.|...-.|-|++..... .+...-+.+...+||.|..+.+. |.-+|-..+++.++.++.. ++..|.
T Consensus 2 ~~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~ 81 (114)
T 3s6e_A 2 VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 81 (114)
T ss_dssp CCCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 46788888888887654321 12234456667899999998874 3446667788888877765 666676
Q ss_pred CCCC
Q psy1301 95 GRPN 98 (429)
Q Consensus 95 ~r~~ 98 (429)
+|..
T Consensus 82 GR~i 85 (114)
T 3s6e_A 82 GKMI 85 (114)
T ss_dssp TEEC
T ss_pred CEEE
Confidence 6543
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=70.49 E-value=11 Score=24.70 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=38.1
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccccC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDFDG 95 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f~~ 95 (429)
++||+..- --...+.++..+||+|..+.+. |.-+|-..+++.++.++..++..+.+
T Consensus 3 ~v~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 67 (75)
T 1iqt_A 3 FVGGLSPD----TPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL 67 (75)
T ss_dssp EESCCCSS----CCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCBTT
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeECC
Confidence 45666432 1234577788899999888873 24467778999999998765544443
No 84
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=68.87 E-value=19 Score=26.91 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=44.7
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.--++||+..--...+....+.++..+||+|..+.+. |.-+|...+.+.+..++.. ++..+.+++.
T Consensus 30 ~~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr~l 102 (127)
T 2a3j_A 30 QVVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGNPL 102 (127)
T ss_dssp SEEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTSCC
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCCEE
Confidence 3478899864222022233566888999999888873 4567888899988888865 5556656544
No 85
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=68.53 E-value=22 Score=25.31 Aligned_cols=64 Identities=8% Similarity=-0.025 Sum_probs=46.2
Q ss_pred CCCCCeeccccccCCCCc----hHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 31 PWALPIIGHLHLLGQYEV----PYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~----~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
+..--++||+..-.. + -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 14 ~~~~l~V~nLp~~~~--~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g~ 89 (105)
T 2nlw_A 14 IDSVIVVDNVPQVGP--DRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 89 (105)
T ss_dssp CCSEEEEESCCCCCT--TTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECSTT
T ss_pred CCCEEEEeCCCcchh--hhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCCC
Confidence 344578999875321 2 356788889999999999875 4557788899988888875 55566554
No 86
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=63.81 E-value=18 Score=23.54 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=37.8
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
++||+..- --...+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.++
T Consensus 3 ~v~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 68 (75)
T 2mss_A 3 FVGGLSVN----TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNK 68 (75)
T ss_dssp EEECCCSS----CCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCSSSC
T ss_pred EEecCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEECCE
Confidence 46666442 22445777889999998888742 33566788999988886555455443
No 87
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=63.36 E-value=43 Score=24.86 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=44.5
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
|.|..--++||+..-. -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++
T Consensus 43 ~~~~~~l~V~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~lng~~i~g~~ 117 (129)
T 2kxn_B 43 PDPNCCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRR 117 (129)
T ss_dssp CCCSSCBCEETCTTSC----CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHHHTTCCSSSSC
T ss_pred CCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 3444567889886522 234577888999999888873 2346777899999988874 554555543
No 88
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=62.36 E-value=32 Score=24.76 Aligned_cols=62 Identities=11% Similarity=0.042 Sum_probs=43.6
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccCCCCc
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGRPNI 99 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r~~~ 99 (429)
--++||+..- --...+.++..+||+|..+.+. +.-+|...+.+.++.++.. ++..+.+++..
T Consensus 12 ~l~V~nLp~~----~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l~ 77 (111)
T 1whx_A 12 VILAKNLPAG----TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPLY 77 (111)
T ss_dssp EEEEESCCTT----CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBCE
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeEEE
Confidence 3467777541 2345677888999999998874 3557778899998888875 55566666543
No 89
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=61.13 E-value=27 Score=25.36 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=42.6
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..-.. ...+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++.
T Consensus 18 ~l~V~nLp~~~t----~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 18 RVVVSGLPPSGS----WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp CEEEEECCSSCC----TTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEEeCCCCCCC----HHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 468898864222 23466778899999888875 4567788899999988874 555565544
No 90
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=59.99 E-value=20 Score=24.65 Aligned_cols=55 Identities=4% Similarity=-0.059 Sum_probs=37.3
Q ss_pred CCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHH
Q psy1301 27 LTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEV 85 (429)
Q Consensus 27 ~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~i 85 (429)
.++-|+..-++||+..=- -...+.++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 6 ~~~~~~~~l~V~~Lp~~~----te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 6 HHHHHGSKVFVGRCTEDM----TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp -----CCEEEEESCCTTC----CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCCC----CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 445555667889986522 234577888999999999885 4567888888888853
No 91
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=59.75 E-value=29 Score=24.31 Aligned_cols=62 Identities=8% Similarity=0.149 Sum_probs=41.6
Q ss_pred CCeeccccccCCC--CchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 34 LPIIGHLHLLGQY--EVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~~~~~--~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
.-++||++..... .--...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~g 81 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDL 81 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHhCCcccCC
Confidence 4567777653320 12235677888999999999875 3446888899999988864 4444543
No 92
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=58.46 E-value=11 Score=27.08 Aligned_cols=69 Identities=12% Similarity=0.044 Sum_probs=45.3
Q ss_pred CCCCCCCCeeccccc---cCCCCchHHHHHHHHHhcCCeeEEeeC----------CccEEEEcChHHHHHHHhh-cCccc
Q psy1301 28 TPMPWALPIIGHLHL---LGQYEVPYQAFKVISKTHGSIFRLKLG----------VVPAIVVNGLENIKEVLFV-KATDF 93 (429)
Q Consensus 28 ppgP~~~P~lG~~~~---~~~~~~~~~~~~~~~~~yG~if~i~lg----------~~~~vvv~~p~~i~~il~~-~~~~f 93 (429)
.+.|...-+|+|+.. +.. +...-+.+...+||+|-.+++. |.-+|-..+++.++.++.. ++..|
T Consensus 4 ~~~~s~~l~l~Nm~~~~~l~d--d~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~ 81 (105)
T 2pe8_A 4 GKCPTKVVLLRNMVGAGEVDE--DLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYF 81 (105)
T ss_dssp GGSCCSEEEEESSSCSCCC-----CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEE
T ss_pred CCCCCCEEEEEcCCChHHhhH--HHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEE
Confidence 345666778888763 222 4556777778899999888763 1224666788888877765 66677
Q ss_pred cCCCC
Q psy1301 94 DGRPN 98 (429)
Q Consensus 94 ~~r~~ 98 (429)
.+|+.
T Consensus 82 ~Gr~i 86 (105)
T 2pe8_A 82 GGRVV 86 (105)
T ss_dssp TTEEC
T ss_pred CCcEE
Confidence 66643
No 93
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=58.45 E-value=22 Score=24.74 Aligned_cols=60 Identities=7% Similarity=0.056 Sum_probs=39.2
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
..|-++||+..=-. -..+.++..+||+|..+++. |.-+|-..+++.+..+... ++..+-+
T Consensus 7 ~~wL~VgNL~~~~t----e~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~Ln~~~l~g 70 (89)
T 2wbr_A 7 SSWLLLKNLTAQID----GPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLAN 70 (89)
T ss_dssp CCEEEEECCCTTCC----CHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTEEETT
T ss_pred cceEEEeCCCccCC----HHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHHhcCCEECC
Confidence 35778999854211 35678899999999888864 3446667778666666554 3333333
No 94
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.52 E-value=45 Score=22.81 Aligned_cols=65 Identities=20% Similarity=0.152 Sum_probs=44.4
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCCc
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPNI 99 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~~ 99 (429)
|..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++..
T Consensus 4 ~~~~l~v~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 78 (95)
T 2dnz_A 4 GSSGLYVGSLHFNI----TEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMR 78 (95)
T ss_dssp CCCEEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSSCCE
T ss_pred CCcEEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCcEEE
Confidence 44456788886522 2445778889999998887632 346777899999988874 55566565543
No 95
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=56.51 E-value=37 Score=23.26 Aligned_cols=67 Identities=15% Similarity=0.167 Sum_probs=44.9
Q ss_pred CCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 25 SDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 25 ~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
.+..|.|..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.
T Consensus 8 ~~~~~~~~~~l~v~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 83 (95)
T 2cqc_A 8 NRANPDPNCCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELD 83 (95)
T ss_dssp CCCSCCGGGCEEEESCCSSC----CHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHHHTTEEET
T ss_pred CCCCCCCCCEEEEECCCCCC----CHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 33445556677889886522 234577888999999888763 1235777889999888874 444444
Q ss_pred C
Q psy1301 95 G 95 (429)
Q Consensus 95 ~ 95 (429)
+
T Consensus 84 g 84 (95)
T 2cqc_A 84 G 84 (95)
T ss_dssp T
T ss_pred C
Confidence 3
No 96
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=55.87 E-value=43 Score=23.38 Aligned_cols=65 Identities=8% Similarity=0.014 Sum_probs=44.3
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
+.+..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+.+.++.++.. ++..+.+++
T Consensus 12 ~~~~~~l~V~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 84 (103)
T 2cq3_A 12 KSTPKRLHVSNIPFRF----RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRK 84 (103)
T ss_dssp SCCCCEEEEESCCTTC----CHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred CCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 3444556889886522 234577888999999888873 3456778899999988874 544555543
No 97
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=55.35 E-value=24 Score=24.48 Aligned_cols=64 Identities=8% Similarity=0.081 Sum_probs=42.3
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..--...+....+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 11 ~l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~l~g~~~~gr~ 81 (96)
T 2dgx_A 11 DVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNSLHRYKIGSKK 81 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHHHTTEEETTEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 467888864222122233345888999999999875 3456777899999888874 554555443
No 98
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.75 E-value=43 Score=23.43 Aligned_cols=69 Identities=10% Similarity=-0.006 Sum_probs=47.1
Q ss_pred CCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 26 DLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 26 ~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
+..+-+..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 9 ~~~~~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 84 (103)
T 2d9p_A 9 RITRYQVVNLYVKNLDDGI----DDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKP 84 (103)
T ss_dssp CCCCSSCCCEEEECCCTTC----CHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred ccCCCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEeCCcE
Confidence 3445556677899986522 234577778899999888765 2346778899999988874 555565554
Q ss_pred C
Q psy1301 98 N 98 (429)
Q Consensus 98 ~ 98 (429)
.
T Consensus 85 l 85 (103)
T 2d9p_A 85 L 85 (103)
T ss_dssp C
T ss_pred E
Confidence 3
No 99
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=53.97 E-value=47 Score=22.89 Aligned_cols=61 Identities=15% Similarity=0.160 Sum_probs=43.0
Q ss_pred CCeeccccc-cCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 34 LPIIGHLHL-LGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 34 ~P~lG~~~~-~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
--++||+.. -. -...+.++..+||+|..+.+ -+.-+|-..+++.++.++.. ++..+.+++.
T Consensus 12 ~l~V~nlp~~~~----t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 75 (96)
T 2kvi_A 12 RLFIGNLPLKNV----SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGKKL 75 (96)
T ss_dssp EEEEESSTTSCC----CHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBTTTB
T ss_pred EEEEeCCCcccC----CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCCcEE
Confidence 457888864 22 23457788899999988876 34567778899999998875 5555655543
No 100
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=53.82 E-value=31 Score=24.57 Aligned_cols=73 Identities=10% Similarity=-0.101 Sum_probs=48.5
Q ss_pred CCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---ccEEEEcChHHHHHHHhh-c--CccccCCC
Q psy1301 24 ISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---VPAIVVNGLENIKEVLFV-K--ATDFDGRP 97 (429)
Q Consensus 24 ~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---~~~vvv~~p~~i~~il~~-~--~~~f~~r~ 97 (429)
.++..+.|..--++||+..-. --..-+.++..+||.|-.+++.. .-+|-..+.+.+..++.. + ...+.+++
T Consensus 7 ~~~~~~~p~~~l~V~nLp~~~---~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~~~Gr~ 83 (102)
T 1x4d_A 7 GQKGRVETRRVVHIMDFQRGK---NLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDYYTTTPALVFGKP 83 (102)
T ss_dssp CCCCCCCCCCEEEEESCCCSS---SHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHHHHHSCCEETTEE
T ss_pred CCCCCCCCCCEEEEeCCCCCc---CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHHHcCCCceECCcE
Confidence 344445566678899986511 12345778889999999998763 457888899988888764 2 22355554
Q ss_pred Cc
Q psy1301 98 NI 99 (429)
Q Consensus 98 ~~ 99 (429)
..
T Consensus 84 l~ 85 (102)
T 1x4d_A 84 VR 85 (102)
T ss_dssp CE
T ss_pred EE
Confidence 43
No 101
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=53.46 E-value=26 Score=24.25 Aligned_cols=65 Identities=11% Similarity=0.097 Sum_probs=43.8
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
..--++||+..--...+....+.++..+||+|-.+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 8 ~~~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 79 (97)
T 1nu4_A 8 NHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK 79 (97)
T ss_dssp CSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHHhCCCEECCc
Confidence 34568898865222122233455888999999999875 5667888999999988875 55455443
No 102
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.75 E-value=51 Score=22.86 Aligned_cols=64 Identities=13% Similarity=0.138 Sum_probs=43.6
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.+..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 15 ~~~~~l~v~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 87 (100)
T 2do4_A 15 LEKHKLFISGLPFSC----TKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMKMDGMTIKENI 87 (100)
T ss_dssp CCCSCEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTEESSSCE
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHHhCCCEECCEE
Confidence 444567888886522 234577888999999888764 2346778899999988865 544554443
No 103
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=52.55 E-value=65 Score=23.48 Aligned_cols=62 Identities=11% Similarity=0.106 Sum_probs=44.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCCCc
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRPNI 99 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~~~ 99 (429)
--++||+..-. -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++...
T Consensus 24 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l~ 95 (126)
T 3ex7_B 24 ILFVTGVHEEA----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 95 (126)
T ss_dssp EEEEESCCTTC----CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSBCE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeEEE
Confidence 46888886422 244577888999999999873 3457888999999998864 55566555443
No 104
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=52.23 E-value=43 Score=23.48 Aligned_cols=69 Identities=14% Similarity=0.113 Sum_probs=46.2
Q ss_pred CCCCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----------CccEEEEcChHHHHHHHhhcCccc
Q psy1301 24 ISDLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----------VVPAIVVNGLENIKEVLFVKATDF 93 (429)
Q Consensus 24 ~~~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----------~~~~vvv~~p~~i~~il~~~~~~f 93 (429)
....|..|..--++||+..-- -...+.++..+|| |..+.+. +.-+|-..+++.++.++.-++..+
T Consensus 7 ~~~~~~~~~~~l~V~nlp~~~----t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 81 (104)
T 1wi8_A 7 GSRLPKSPPYTAFLGNLPYDV----TEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 81 (104)
T ss_dssp CCCCCSSSCEEEEEESCCSSC----CHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEE
T ss_pred CCCCCCCCCCEEEEeCCCCcC----CHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCEe
Confidence 344455555567889886522 2345777888999 9888874 234677889999999884455555
Q ss_pred cCCC
Q psy1301 94 DGRP 97 (429)
Q Consensus 94 ~~r~ 97 (429)
.++.
T Consensus 82 ~g~~ 85 (104)
T 1wi8_A 82 GNKR 85 (104)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 5543
No 105
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=51.86 E-value=51 Score=22.80 Aligned_cols=65 Identities=12% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeE--------EeeC---------CccEEEEcChHHHHHHHhh-c
Q psy1301 28 TPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFR--------LKLG---------VVPAIVVNGLENIKEVLFV-K 89 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~--------i~lg---------~~~~vvv~~p~~i~~il~~-~ 89 (429)
||.|..--++||+..-- -...+.++..+||+|.. +.+. |.-+|...+.+.++.++.. +
T Consensus 9 ~~~~~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~~l~ 84 (99)
T 2la6_A 9 SHSDNNTIFVQGLGENV----TIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAIDWFD 84 (99)
T ss_dssp SCCCCSEEEEECCCSSC----CHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCCCCCC----CHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHHHhC
Confidence 33444456888886522 24557788899999876 5542 1335677888988888864 5
Q ss_pred CccccCC
Q psy1301 90 ATDFDGR 96 (429)
Q Consensus 90 ~~~f~~r 96 (429)
+..+.++
T Consensus 85 g~~~~g~ 91 (99)
T 2la6_A 85 GKEFSGN 91 (99)
T ss_dssp TCBSSSS
T ss_pred CCEeCCc
Confidence 5455444
No 106
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=50.73 E-value=63 Score=22.83 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=41.6
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
--++||+..- --...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 17 ~l~V~nLp~~----~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g 77 (108)
T 1x4c_A 17 RVVVSGLPPS----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRS 77 (108)
T ss_dssp EEEEESCCSS----CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHHSSSEEEEC
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHHHCcCCccC
Confidence 4688888642 2245677888999999888764 5667788899999988874 4444543
No 107
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=50.55 E-value=64 Score=22.80 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=40.0
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~ 88 (429)
+.|..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+.+.++.++..
T Consensus 12 ~~~~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 12 VTEGKTVFIRNLSFDS----EEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCCCCCEEEESCCTTC----CHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 3445567899986522 234577778999999998875 2346777899999988875
No 108
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=50.36 E-value=32 Score=24.17 Aligned_cols=58 Identities=9% Similarity=0.034 Sum_probs=39.7
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
-++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 22 lfV~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~gr 89 (99)
T 4fxv_A 22 LIVNYLPQNM----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSK 89 (99)
T ss_dssp EEEESCCTTC----CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 5788886522 2346778889999998887631 235777899999888865 55455444
No 109
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=50.12 E-value=29 Score=25.10 Aligned_cols=59 Identities=14% Similarity=0.032 Sum_probs=41.7
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++
T Consensus 8 lfV~nLp~~~----te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~~g~~ 74 (115)
T 4f25_A 8 IFIKNLDKSI----DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRK 74 (115)
T ss_dssp EEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred EEECCCCCCC----CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 5888886522 235677888999999888763 2347888999999998865 555555543
No 110
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=49.14 E-value=55 Score=21.67 Aligned_cols=61 Identities=10% Similarity=0.046 Sum_probs=41.4
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
|..--++||+..-. -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 6 ~~~~l~V~nl~~~~----~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 76 (85)
T 3mdf_A 6 TKRVLYVGGLAEEV----DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFG 76 (85)
T ss_dssp CSSEEEEECCCTTC----CHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCCC----CHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 34456788886422 245677888999999998873 2346778889999888854 4444433
No 111
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=48.76 E-value=53 Score=23.05 Aligned_cols=60 Identities=12% Similarity=0.135 Sum_probs=41.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..-. -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++.
T Consensus 25 ~l~V~nlp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 94 (106)
T 1p27_B 25 ILFVTGVHEEA----TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 94 (106)
T ss_dssp EEEEECCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCCC----CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHHhcCCEECCcE
Confidence 36788886522 234577888999999888873 2345777899999888874 554554443
No 112
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=48.35 E-value=61 Score=22.31 Aligned_cols=63 Identities=10% Similarity=0.069 Sum_probs=42.7
Q ss_pred CCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 28 TPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.+.+..--++||+ . --...+.++..+||+|..+.++ +.-+|-..+++.++.++.. ++..+.++
T Consensus 11 ~~~~~~~l~V~n~-~-----~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~ 77 (97)
T 1x5p_A 11 APRKGNTLYVYGE-D-----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESV 77 (97)
T ss_dssp CCCCCSEEEEECS-S-----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHTTTEEETTE
T ss_pred CCCCCCEEEEcCC-C-----CCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHHhCCCeECCe
Confidence 3344455688883 2 2245577888999999999875 3446777899988888865 54455444
No 113
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.30 E-value=66 Score=22.37 Aligned_cols=67 Identities=12% Similarity=-0.091 Sum_probs=44.6
Q ss_pred CCCCCCCCeeccccccCCCCchHHHHHHHHHh-cCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCcc-ccCC
Q psy1301 28 TPMPWALPIIGHLHLLGQYEVPYQAFKVISKT-HGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATD-FDGR 96 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~-yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~-f~~r 96 (429)
.+.|..--++||+..-- -...+.++..+ ||+|..+.+. +.-+|-..+.+.++.++.. ++.. +.++
T Consensus 5 ~~~~~~~l~V~nLp~~~----t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~~g~ 80 (104)
T 2dhg_A 5 SSGPEYSLFVGDLTPDV----DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTECQGAVGLGSK 80 (104)
T ss_dssp CSSCCCCEEEECCCTTC----CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHHTTTCCSSSSS
T ss_pred CCCCCcEEEEeCCCCCC----CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHHccCCcccCCE
Confidence 34555567899986522 23456777788 9999888763 2346777899999988874 4444 5555
Q ss_pred CC
Q psy1301 97 PN 98 (429)
Q Consensus 97 ~~ 98 (429)
+.
T Consensus 81 ~l 82 (104)
T 2dhg_A 81 PV 82 (104)
T ss_dssp CC
T ss_pred eE
Confidence 43
No 114
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=47.34 E-value=62 Score=22.28 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=42.2
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 8 ~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 79 (99)
T 1whw_A 8 SGRLFVRNLSYTS----SEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAEVDGQVFQGRM 79 (99)
T ss_dssp CEEEEEECCCTTC----CHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHHTTTEESSSCE
T ss_pred CCEEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 3445788876422 234577888999999999874 2346778899999988854 444554443
No 115
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=46.91 E-value=57 Score=21.75 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=39.5
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 7 l~V~nlp~~~----t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (88)
T 4a8x_A 7 VHIGRLTRNV----TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQ 75 (88)
T ss_dssp EEEECCCTTC----CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEEeCCCCCC----CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHHcCCCeECCe
Confidence 3677775422 234567778999999888762 2446778899999988875 55555444
No 116
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=46.88 E-value=45 Score=23.21 Aligned_cols=59 Identities=7% Similarity=-0.001 Sum_probs=39.7
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
++||+..- --...+.++..+||+|-.+.+. +.-+|-..+++.++.++.. ++..+.++..
T Consensus 4 ~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 67 (101)
T 2hvz_A 4 YVGNLGTG----AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRV 67 (101)
T ss_dssp EEECCCSS----CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCCC
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcEE
Confidence 56776542 1244577888999999888763 3456777899999888874 4445655543
No 117
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=46.83 E-value=36 Score=24.51 Aligned_cols=60 Identities=12% Similarity=0.064 Sum_probs=41.9
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.--++||+..-- -...+.++..+||+|-.+.+. |.-+|...+++.++.++.. ++..+.++
T Consensus 7 ~~lfV~nL~~~~----te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~lng~~~~gr 76 (110)
T 3s8s_A 7 KEVTFARLNDNV----RETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGN 76 (110)
T ss_dssp CEEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred cEEEEECCCCCC----CHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 346788886422 245677888999999888763 1237888899999998875 55455444
No 118
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.42 E-value=72 Score=22.23 Aligned_cols=64 Identities=11% Similarity=0.036 Sum_probs=44.9
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++.
T Consensus 14 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 87 (105)
T 1x5u_A 14 QDATVYVGGLDEKV----SEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYGKPI 87 (105)
T ss_dssp TTTEEEEECCCTTC----CHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSSCBC
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHHhCCCeECCeEE
Confidence 33456889886522 2445778889999999988743 346788899999999875 5555655543
No 119
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=46.35 E-value=73 Score=22.60 Aligned_cols=60 Identities=23% Similarity=0.238 Sum_probs=41.5
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++
T Consensus 28 ~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~i~g~~ 97 (108)
T 2jrs_A 28 RLYVGSLHFNI----TEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRP 97 (108)
T ss_dssp EEEEECCCSSC----CHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 46888886522 244577888999999888763 2346778899999998864 444555543
No 120
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.28 E-value=40 Score=24.14 Aligned_cols=55 Identities=4% Similarity=-0.009 Sum_probs=38.0
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccc
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDF 93 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f 93 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.-++..+
T Consensus 28 l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 91 (114)
T 2cq4_A 28 VFCMQLAARI----RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRL 91 (114)
T ss_dssp EEEESCCTTC----CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEE
T ss_pred EEEeCCCCCC----CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEe
Confidence 5788875422 234577888999999999875 244677788888888884354444
No 121
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.89 E-value=71 Score=21.99 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=44.3
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f~~r~~ 98 (429)
+..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+.+.++.++.-++..+.+++.
T Consensus 9 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~l 81 (99)
T 2dgs_A 9 KSNKIFVGGIPHNC----GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKV 81 (99)
T ss_dssp SCCEEEEESCCSSC----CHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSCBC
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCeEE
Confidence 33456888886522 234577888999999888874 23467778999999988756556655543
No 122
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=45.45 E-value=50 Score=22.17 Aligned_cols=57 Identities=18% Similarity=0.273 Sum_probs=37.9
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.-++..+.++
T Consensus 10 ~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~~g~ 75 (89)
T 3ucg_A 10 YVGNVDYGA----TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGR 75 (89)
T ss_dssp EEESCCTTC----CHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEETTE
T ss_pred EEeCCCCCC----CHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEECCc
Confidence 566665421 2345778888999998887632 34677888998888884455555444
No 123
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=45.42 E-value=55 Score=23.67 Aligned_cols=62 Identities=18% Similarity=0.160 Sum_probs=42.6
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.--++||+..- --...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.+++.
T Consensus 8 ~~l~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~l 78 (116)
T 2fy1_A 8 GKLFIGGLNRE----TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGKAI 78 (116)
T ss_dssp CEEEEECCTTT----CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSSBC
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCEEE
Confidence 34578887542 2244577888999999888764 3446777899999988875 5556655543
No 124
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=45.00 E-value=35 Score=22.91 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=40.2
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccc
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDF 93 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f 93 (429)
+..--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++...+..+
T Consensus 10 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~ 77 (87)
T 3s7r_A 10 DAGKMFVGGLSWDT----SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRL 77 (87)
T ss_dssp CTTEEEEECCCTTC----CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSCEEE
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCCCEE
Confidence 34456888886522 245577888999999888763 124677789999998886544333
No 125
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=44.84 E-value=33 Score=24.46 Aligned_cols=68 Identities=7% Similarity=0.022 Sum_probs=43.2
Q ss_pred CCCCCeeccccccCCCC-c-----hHHHHHHHHHhcCCeeEEeeCC-----------ccEEEEcChHHHHHHHhh-cCcc
Q psy1301 31 PWALPIIGHLHLLGQYE-V-----PYQAFKVISKTHGSIFRLKLGV-----------VPAIVVNGLENIKEVLFV-KATD 92 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~-~-----~~~~~~~~~~~yG~if~i~lg~-----------~~~vvv~~p~~i~~il~~-~~~~ 92 (429)
|...-+|-|+..-.... + ...-+.+...+||+|-.+.+.. .-+|-..+++.++.++.. ++..
T Consensus 4 ps~vl~L~Nm~~~~~l~~d~~~~~~~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~ 83 (105)
T 3v4m_A 4 PTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRK 83 (105)
T ss_dssp CCSEEEEESSCCGGGSSSHHHHHHHHHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCE
T ss_pred CCeEEEEECCCCHHHccChHHHHHHHHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCE
Confidence 44456677764422111 2 2345667778999999998752 235777888888887765 6667
Q ss_pred ccCCCC
Q psy1301 93 FDGRPN 98 (429)
Q Consensus 93 f~~r~~ 98 (429)
|.+|+.
T Consensus 84 f~GR~i 89 (105)
T 3v4m_A 84 FANRVV 89 (105)
T ss_dssp ETTEEC
T ss_pred eCCCEE
Confidence 766643
No 126
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.77 E-value=66 Score=21.30 Aligned_cols=53 Identities=9% Similarity=-0.088 Sum_probs=38.2
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~ 88 (429)
..--++||+..-. -...+.++..+||+|..+.+. +.-+|-..+++.++.++..
T Consensus 12 ~~~l~V~~l~~~~----t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 12 ITTLYVGGLGDTI----TETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp CCCEEEECCTTTS----CHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred ccEEEEcCCCCCC----CHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 3456888886522 244577888999999888864 3456777899999888874
No 127
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=44.43 E-value=70 Score=21.56 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=41.6
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..- --...+.++..+||+|..+.+. +.-+|-..+.+.++.++.. ++..+.++.
T Consensus 9 ~~l~V~nlp~~----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~~ 77 (92)
T 2dgv_A 9 CQIFVRNLPFD----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGRE 77 (92)
T ss_dssp CEEEECSCCTT----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHHHTTCCBTTBC
T ss_pred cEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 34678888642 2245677888999999888764 2346677889999888875 554565543
No 128
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.22 E-value=36 Score=22.70 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=38.2
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~ 88 (429)
+.|..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 2 ~~~~~~l~v~nlp~~~----t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (85)
T 1x4e_A 2 SSGSSGLYIRGLQPGT----TDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVTA 66 (85)
T ss_dssp CCCCCEEEEESCCTTC----CHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 3344456788875422 2345677788999998887632 346777888888888764
No 129
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=43.57 E-value=45 Score=24.10 Aligned_cols=60 Identities=15% Similarity=0.086 Sum_probs=43.2
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcC-CeeEEeeC-----CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHG-SIFRLKLG-----VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG-~if~i~lg-----~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.--++||+..-- -...+.++..+|| +|-.+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 29 ~~l~VgnLp~~~----te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l~Gr 95 (111)
T 2jvr_A 29 YRITMKNLPEGC----SWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGS 95 (111)
T ss_dssp EEEEEECSSCCC----CHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEETTE
T ss_pred CEEEEECCCCCC----CHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 356889886522 2456778889999 88888773 5667888899999988865 55455554
No 130
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=43.47 E-value=57 Score=23.02 Aligned_cols=54 Identities=11% Similarity=0.002 Sum_probs=38.9
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHh
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLF 87 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~ 87 (429)
.|...-++||+..= --..-+.++..+||.|..+.+. |.-+|-..+.+.++.++.
T Consensus 13 ~p~~~l~V~nLp~~----~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 13 APSRVLHIRKLPGE----VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SCCSEEEEESCCTT----CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 34456889998752 1234567888999999888764 445777788888888876
No 131
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=43.35 E-value=38 Score=24.71 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=39.8
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|...+.+.++.++.-++..+.++.
T Consensus 39 l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~~g~~ 106 (124)
T 2jwn_A 39 VYVGNVDYGS----TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRGRT 106 (124)
T ss_dssp EEEEEECTTC----CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEETTEE
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeECCeE
Confidence 4677775421 245577888999999888763 2346778899999988844555555443
No 132
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.30 E-value=82 Score=21.99 Aligned_cols=64 Identities=11% Similarity=0.120 Sum_probs=44.3
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCCc----------cEEEEcChHHHHHHHhh--cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVV----------PAIVVNGLENIKEVLFV--KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~~----------~~vvv~~p~~i~~il~~--~~~~f~~r~~ 98 (429)
+..--++||+..-- -...+.++..+||+|..+.+... -+|-..+.+.++.++.. ++..+.+++.
T Consensus 14 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~~g~~l 89 (107)
T 2cph_A 14 TTSKILVRNIPFQA----NQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRL 89 (107)
T ss_dssp CCCCEEEESCCTTC----CHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHHHHTCCBSSSCBC
T ss_pred CCCEEEEeCCCCcC----CHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHHhccCCeECCCEE
Confidence 33456889886522 24457788899999999987433 36777899999888875 4556655543
No 133
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=43.20 E-value=44 Score=22.07 Aligned_cols=57 Identities=12% Similarity=0.166 Sum_probs=38.0
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
++||+..-. -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 5 ~V~nlp~~~----t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~l~g~~~~g~ 71 (83)
T 3md1_A 5 FVGDLNVNV----DDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGR 71 (83)
T ss_dssp EEECCCTTC----CHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHHTTCEETTE
T ss_pred EEeCCCCCC----CHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHHhcCCeeCCc
Confidence 466664421 234567778999999888763 2346788899999988875 54455443
No 134
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=43.12 E-value=37 Score=24.92 Aligned_cols=69 Identities=7% Similarity=-0.005 Sum_probs=46.0
Q ss_pred CCCCCeeccccccCC-CCchHHHHHHHHHhcCCeeEEeeCC-------------ccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 31 PWALPIIGHLHLLGQ-YEVPYQAFKVISKTHGSIFRLKLGV-------------VPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 31 P~~~P~lG~~~~~~~-~~~~~~~~~~~~~~yG~if~i~lg~-------------~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
|...-+|.|+..-.. ..+...-+.+...+||+|..+++.. .-+|-..+++.++.++.. ++..|.+
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 556778888754211 0256667777788999998887642 234556688888877765 6667777
Q ss_pred CCCc
Q psy1301 96 RPNI 99 (429)
Q Consensus 96 r~~~ 99 (429)
|...
T Consensus 99 R~i~ 102 (118)
T 3ue2_A 99 RKVV 102 (118)
T ss_dssp EECE
T ss_pred cEEE
Confidence 6543
No 135
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=43.03 E-value=83 Score=22.00 Aligned_cols=62 Identities=8% Similarity=-0.088 Sum_probs=43.1
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeE-EeeC--------CccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFR-LKLG--------VVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~-i~lg--------~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
..--++||+..-- -..-+.++..+||.|-. +.+. |.-+|-..+++.++.++..++..+.++.
T Consensus 15 ~~~l~V~nLp~~~----te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr~ 85 (104)
T 1wg5_A 15 DGFVRLRGLPFGC----SKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHRY 85 (104)
T ss_dssp CCEEEEESCCTTC----CHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSSC
T ss_pred CCEEEEeCCCCCC----CHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCcE
Confidence 3456888886522 24457788889998865 6552 3457888899999999987665555553
No 136
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=42.88 E-value=68 Score=22.95 Aligned_cols=65 Identities=15% Similarity=0.092 Sum_probs=43.8
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-c--CccccCCCCc
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-K--ATDFDGRPNI 99 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~--~~~f~~r~~~ 99 (429)
|..--++||+..=- -..-+.++..+||.|-.+.+. |.-+|-..+.+.++.++.. + +..+.+++..
T Consensus 15 ~~~~LfV~nLp~~v----te~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~~l~~~~~~l~Gr~l~ 85 (105)
T 1sjq_A 15 PSRVIHIRKLPIDV----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIY 85 (105)
T ss_dssp CCCEEEECSCCTTS----CHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTSCCEETTEECC
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHHhccCCceECCEEEE
Confidence 34456888886522 234577888999999888864 4557888899988888763 2 2345555443
No 137
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.72 E-value=76 Score=21.48 Aligned_cols=56 Identities=9% Similarity=0.042 Sum_probs=40.1
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~ 88 (429)
+.+..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+++.++.++..
T Consensus 13 ~~~~~~l~V~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 13 APSKSTVYVSNLPFSL----TNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp CCCTTSEEEESCCTTS----CHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCC----CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3444567889886422 2445778889999998888742 347788899999888864
No 138
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=41.85 E-value=54 Score=23.05 Aligned_cols=60 Identities=7% Similarity=0.073 Sum_probs=40.7
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
..--++||+..-. -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+
T Consensus 29 ~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 97 (107)
T 3ulh_A 29 GGKLLVSNLDFGV----SDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG 97 (107)
T ss_dssp SEEEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 3456888876522 234577888899999887764 2346777899999888875 5444443
No 139
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=41.55 E-value=50 Score=23.51 Aligned_cols=61 Identities=11% Similarity=0.129 Sum_probs=41.8
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEee-CCccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKL-GVVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~l-g~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..-. -...+.++..+||+|..+.+ -|.-+|-..+.+.++.++.. ++..+.+++
T Consensus 32 ~~l~V~nLp~~~----t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 94 (108)
T 2jvo_A 32 TRLFVRPFPLDV----QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQP 94 (108)
T ss_dssp SEEEECSSCTTC----CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHHHTTCEETTEE
T ss_pred CEEEEECCCCCC----CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 345788875422 23457788899999888776 45566777899999888875 555554443
No 140
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=41.50 E-value=1.1e+02 Score=23.04 Aligned_cols=64 Identities=8% Similarity=-0.012 Sum_probs=43.8
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+..--. ...+.++..+||+|-.+.+. |.-+|-..+.+.++.++.. ++..+.+++.
T Consensus 72 ~~~~l~V~nl~~~~t----~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 140 (150)
T 2i2y_A 72 LDCKVYVGNLGNNGN----KTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRV 140 (150)
T ss_dssp TSCEEEEESCCSCCS----CHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHHHSSSCSSSSCC
T ss_pred CCCEEEEeCCCCCCC----HHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHHcCCCEECCeEE
Confidence 334568898865222 23467778899999998874 4556778899999988874 5555555443
No 141
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=41.38 E-value=66 Score=22.84 Aligned_cols=61 Identities=11% Similarity=0.084 Sum_probs=41.4
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDG 95 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~ 95 (429)
+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++...+..+.+
T Consensus 24 ~~~~lfV~nLp~~~----te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~~~~l~g 93 (109)
T 2rs2_A 24 SGCKMFIGGLSWQT----TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDS 93 (109)
T ss_dssp --CCEEEESCCTTC----CHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSSCEEETT
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHCCCcCCC
Confidence 33456888886421 2345778889999998888742 3478889999999998765444433
No 142
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.10 E-value=58 Score=22.68 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=39.0
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
--++||+..- --...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 10 ~l~V~nlp~~----~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 78 (104)
T 1p1t_A 10 SVFVGNIPYE----ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGR 78 (104)
T ss_dssp CEEEESCCTT----SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHHSSSBSCSSS
T ss_pred EEEEeCCCCc----CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 3577877542 2234577888999998887763 2345677889999888864 44445443
No 143
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.58 E-value=67 Score=22.16 Aligned_cols=64 Identities=8% Similarity=-0.037 Sum_probs=42.7
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
|..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++.
T Consensus 14 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~l~g~~~~g~~l 81 (99)
T 2cpj_A 14 QRSRLFVGNLPPDI----TEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQL 81 (99)
T ss_dssp CTTEEEEESCCTTC----CHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTTBCC
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCEeCCceE
Confidence 33456888886522 234577888999999888875 3445666788888888754 5545555443
No 144
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=40.58 E-value=68 Score=22.21 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=38.7
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
--++||+..- --...+.++..+||+|..+.+. |.-+|-..+.+.+..++.. ++..+.+
T Consensus 29 ~l~V~nlp~~----~~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g 90 (101)
T 2la4_A 29 TAYIGNIPHF----ATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIVALANFPFQG 90 (101)
T ss_dssp EEEEESCCTT----CCHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred EEEEcCCCcc----cCHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCeECC
Confidence 4578887642 2245677888999999888874 3445666788888877754 4444433
No 145
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.35 E-value=64 Score=22.56 Aligned_cols=63 Identities=13% Similarity=0.137 Sum_probs=43.2
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
.+..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.++
T Consensus 14 ~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 85 (105)
T 2dh8_A 14 DEIGKLFVGGLDWST----TQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 85 (105)
T ss_dssp SSSSEECCBSCCTTC----CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEETTE
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeECCE
Confidence 344456888886522 2345778889999998877632 34577789999999888765555554
No 146
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.24 E-value=90 Score=21.61 Aligned_cols=62 Identities=8% Similarity=0.108 Sum_probs=43.8
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++.
T Consensus 14 ~~l~V~nLp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 85 (103)
T 2dnm_A 14 ITLKVDNLTYRT----SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGREL 85 (103)
T ss_dssp CEEEEESCCTTC----CHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTTBCC
T ss_pred eEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECCcEE
Confidence 456888886522 244577888999999999874 3457788899999988874 5555655543
No 147
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.06 E-value=79 Score=21.63 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=41.9
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++
T Consensus 6 ~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 79 (98)
T 2cpf_A 6 SGLFIKNLNFST----TEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQLQGHTVDGHK 79 (98)
T ss_dssp CCEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHHSTTCEETTEE
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 346788886422 244577888999999888764 2346777899999999885 555555543
No 148
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.03 E-value=44 Score=24.00 Aligned_cols=59 Identities=12% Similarity=0.212 Sum_probs=40.7
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
--++||+..-- -...+.++..+||+|..+.+.. .-+|...+.+.++.++..++..+.++
T Consensus 29 ~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~ 96 (116)
T 1x4b_A 29 KLFIGGLSFET----TEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGR 96 (116)
T ss_dssp EEEEECCTTCC----CHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETTE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEECCE
Confidence 45788876422 2445778889999998887632 34567789999999987755555444
No 149
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.01 E-value=62 Score=23.12 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=45.2
Q ss_pred CCCCCCCCeeccccccCCC-Cc------hHHHHHHHHHhcCCeeEEeeC-----CccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 28 TPMPWALPIIGHLHLLGQY-EV------PYQAFKVISKTHGSIFRLKLG-----VVPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~-~~------~~~~~~~~~~~yG~if~i~lg-----~~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
-|.|...-++.|+..-... .+ ....+.+...+||+|..+.+. |.-+|-..+.+.++.++.. ++..|.
T Consensus 11 ~~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~ 90 (112)
T 2dit_A 11 RMRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQTLDGRWFG 90 (112)
T ss_dssp CCCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHHSTTCEET
T ss_pred CCCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 4556667788887442110 01 134677788899999888763 4446667788888888764 555565
Q ss_pred CCCC
Q psy1301 95 GRPN 98 (429)
Q Consensus 95 ~r~~ 98 (429)
+++.
T Consensus 91 gr~l 94 (112)
T 2dit_A 91 GRQI 94 (112)
T ss_dssp TEEC
T ss_pred CcEE
Confidence 5543
No 150
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.64 E-value=1e+02 Score=21.76 Aligned_cols=66 Identities=11% Similarity=0.052 Sum_probs=43.7
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh---cCccccCCCCc
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV---KATDFDGRPNI 99 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~---~~~~f~~r~~~ 99 (429)
.|...-++||+..= --..-+.++..+||.|-.+.+. +.-+|-..+.+.++.++.. +...+.+++..
T Consensus 13 ~p~~~l~V~nLp~~----~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~l~~~~~~i~Gr~l~ 84 (104)
T 1wex_A 13 SVSPVVHVRGLCES----VVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVTFAADVPVYIAGQQAF 84 (104)
T ss_dssp CCCSEEEEESCCSS----CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHHHSCCBSSSSBCE
T ss_pred CCCCEEEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHhccCCceECCEEEE
Confidence 34456789998642 2244577888999999888864 3456777888888888763 22235555443
No 151
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.43 E-value=90 Score=21.98 Aligned_cols=61 Identities=11% Similarity=0.092 Sum_probs=42.0
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+.+.++.++.. ++..+.+++
T Consensus 26 ~~l~V~nl~~~~----t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 90 (109)
T 1x4g_A 26 CTVYCGGIASGL----TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHV 90 (109)
T ss_dssp CEEEEECCSSCC----CHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred cEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHHcCCCEECCcE
Confidence 346788886522 234567778899999888874 4557778899988888864 544554443
No 152
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.18 E-value=72 Score=23.41 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=44.1
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh---cCccccCCCCc
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV---KATDFDGRPNI 99 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~---~~~~f~~r~~~ 99 (429)
..|...-++||+..=- -..-+.++..+||.|..+.+. |.-+|-..+.+.++.++.. ....+.+++..
T Consensus 28 ~~ps~~LfVgNLp~~v----te~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~~l~~~~~~l~Gr~l~ 100 (119)
T 2ad9_A 28 GVPSRVIHIRKLPIDV----TEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIY 100 (119)
T ss_dssp SSCCSEEEEESCCTTC----CHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHHHHHHHCCCBTTBCCE
T ss_pred CCCCCEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhccCCceECCeEEE
Confidence 3344567899986522 234577888999999888865 4456777788888887763 12345555443
No 153
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=37.97 E-value=56 Score=24.51 Aligned_cols=64 Identities=8% Similarity=0.069 Sum_probs=41.2
Q ss_pred CCCCCCCC--CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC-----ccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 27 LTPMPWAL--PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV-----VPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 27 ~ppgP~~~--P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~-----~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
+++.|... -++||+..= --...+.++..+||+|-++.+.. +-+|...+++.++.++.. ++..+.
T Consensus 21 ~~~~ps~VL~I~V~NL~~~----vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~LnG~~i~ 92 (130)
T 3zzy_A 21 AMAGQSPVLRIIVENLFYP----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIY 92 (130)
T ss_dssp ----CCSEEEEEEESCCSC----CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHHTTCEEE
T ss_pred ccCCCCceEEEEECCCCCC----CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHHcCCCeec
Confidence 55566654 459998531 12345778899999998888753 257888888888888765 444443
No 154
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=37.90 E-value=95 Score=21.17 Aligned_cols=59 Identities=14% Similarity=0.147 Sum_probs=40.1
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
--++||+..- --...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 4 ~l~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 72 (96)
T 2x1f_A 4 VVYLGSIPYD----QTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNLNGYQLGSR 72 (96)
T ss_dssp EEEEESCCTT----CCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEEEECCCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHHhCCCeECCe
Confidence 3467777542 1244577888999999998874 3346777899999888864 44455443
No 155
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.79 E-value=81 Score=21.63 Aligned_cols=64 Identities=14% Similarity=0.019 Sum_probs=43.0
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCee-EEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIF-RLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if-~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.+..--++||+..-- -...+.++..+||+|. .+.+. +.-+|-..+++.++.++.. ++..+.++.
T Consensus 7 ~~~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 81 (99)
T 2div_A 7 GMAASLWMGDLEPYM----DENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGAT 81 (99)
T ss_dssp SSSSEEEECSCCTTC----CHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHTTTTSEESSCS
T ss_pred CCccEEEEeCCCCCC----CHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHHHcCCccCCCC
Confidence 344556888886522 2455778889999988 77763 2235677889999988874 555555554
No 156
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.68 E-value=1e+02 Score=21.61 Aligned_cols=48 Identities=8% Similarity=0.111 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhhcCccccCCCC
Q psy1301 50 YQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFVKATDFDGRPN 98 (429)
Q Consensus 50 ~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~~~~~f~~r~~ 98 (429)
...+.++..+||+|..+.+. |.-+|-..+++.+..++... ..+.+++.
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~~-~~~~g~~l 82 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQNE-VGLVDNPL 82 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHTC-CBCSSSBC
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHhc-CCCCCCeE
Confidence 46788889999999998874 34467778999988888763 34444443
No 157
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=37.68 E-value=1.1e+02 Score=25.27 Aligned_cols=62 Identities=11% Similarity=0.161 Sum_probs=44.2
Q ss_pred CCCeeccccc-cCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 33 ALPIIGHLHL-LGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 33 ~~P~lG~~~~-~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.--++||+.. --. ...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++.
T Consensus 35 ~~l~V~nLp~~~~t----e~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~~l 102 (229)
T 2adc_A 35 SVLLVSNLNPERVT----PQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPI 102 (229)
T ss_dssp SEEEEESCCTTTCC----HHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHHHHTTCBCSSSBC
T ss_pred CEEEEeCCCcccCC----HHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHHHhCCCeECCeEE
Confidence 3468888865 222 34567788999999999875 5567888999999998863 5555655543
No 158
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=37.66 E-value=92 Score=21.91 Aligned_cols=59 Identities=8% Similarity=0.047 Sum_probs=41.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
--++||+..-. -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 28 ~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 96 (110)
T 1oo0_B 28 ILFVTSIHEEA----QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ 96 (110)
T ss_dssp EEEEESCCTTC----CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCc
Confidence 36888886522 234577888999999999874 3346778899999888874 44445443
No 159
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.14 E-value=39 Score=24.11 Aligned_cols=59 Identities=8% Similarity=0.060 Sum_probs=40.1
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 31 ~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~l~g~~~~g~ 97 (109)
T 2err_A 31 RLHVSNIPFRF----RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGR 97 (109)
T ss_dssp EEEEESCCTTC----CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHHHTTCEETTE
T ss_pred EEEEECCCCcC----CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHHcCCCEECCE
Confidence 45788875422 244577888999999888874 3446777888888888874 44455444
No 160
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=36.99 E-value=1.4e+02 Score=23.46 Aligned_cols=59 Identities=14% Similarity=0.234 Sum_probs=39.8
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
-++||+..- --...+.++..+||+|..+.+. +.-+|...+.+.++.++.. ++..+.+++
T Consensus 91 l~V~nLp~~----~te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~lng~~l~Gr~ 158 (177)
T 2f3j_A 91 LLVSNLDFG----VSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRP 158 (177)
T ss_dssp EEEECCCSC----CCHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHHSTTCBCSSSB
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHHhCCCEECCEE
Confidence 356665431 2245577888999999888874 3457778899999988874 444555543
No 161
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.80 E-value=88 Score=22.32 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=43.0
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
+..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+.+.++.++..-...+.+++
T Consensus 16 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g~~ 87 (116)
T 2cqd_A 16 TFTKIFVGGLPYHT----TDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRK 87 (116)
T ss_dssp SSSEEEEECCCSSC----CHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEETTEE
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCCcCCCEE
Confidence 33456888886522 2445778889999999888753 346777899999998876433454443
No 162
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=36.49 E-value=60 Score=22.10 Aligned_cols=62 Identities=10% Similarity=0.107 Sum_probs=42.1
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC--------ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV--------VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~--------~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 15 ~~~~l~v~nlp~~~----~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 85 (95)
T 2ywk_A 15 ADRTVFVGNLEARV----REEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIALLNGIRLYGR 85 (95)
T ss_dssp GGGEEEEECCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHHHHTTCEETTE
T ss_pred CCCEEEEECCCCCC----CHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHHHhCCCEECCC
Confidence 33456888886522 2455778889999998887742 346777899999888874 44445443
No 163
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.38 E-value=42 Score=24.00 Aligned_cols=64 Identities=13% Similarity=0.057 Sum_probs=43.0
Q ss_pred CCCCCCeeccccccCCCCchHHHHH---HHHHhcCCeeEEeeC------------CccEEEEcChHHHHHHHhh-cCccc
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFK---VISKTHGSIFRLKLG------------VVPAIVVNGLENIKEVLFV-KATDF 93 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~---~~~~~yG~if~i~lg------------~~~~vvv~~p~~i~~il~~-~~~~f 93 (429)
.+..--++||+..-.. ...+. ++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+
T Consensus 13 ~~~~~l~V~nLp~~~~----~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~ 88 (111)
T 2cpi_A 13 VQKNLVFVVGLSQRLA----DPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVV 88 (111)
T ss_dssp CCSSCEEEEEECTTTC----CHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEE
T ss_pred cCCCEEEEECCCCCCC----HHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEE
Confidence 3445668899865222 22344 777899999888764 2345777899999988886 65566
Q ss_pred cCCC
Q psy1301 94 DGRP 97 (429)
Q Consensus 94 ~~r~ 97 (429)
.+++
T Consensus 89 ~gr~ 92 (111)
T 2cpi_A 89 DGRT 92 (111)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 5553
No 164
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=36.05 E-value=89 Score=24.51 Aligned_cols=61 Identities=8% Similarity=0.098 Sum_probs=41.0
Q ss_pred CCCCCC--CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-----CccEEEEcChHHHHHHHhh-cCccc
Q psy1301 29 PMPWAL--PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-----VVPAIVVNGLENIKEVLFV-KATDF 93 (429)
Q Consensus 29 pgP~~~--P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-----~~~~vvv~~p~~i~~il~~-~~~~f 93 (429)
|.|... -++||+..= --...+.++..+||+|-++++. +.-+|-..|.+.++.++.. ++..+
T Consensus 41 ~~ps~vl~l~VgNL~~~----vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~LnG~~i 109 (164)
T 1sjr_A 41 AGQSPVLRIIVENLFYP----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNI 109 (164)
T ss_dssp CCCCCEEEEEECSCCSC----CCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHHSTTBCS
T ss_pred CCCCceEEEEEeCcCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHHhCCCEe
Confidence 444443 468888541 2234577888999999888873 2457778888888888775 44444
No 165
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=35.81 E-value=1.1e+02 Score=21.23 Aligned_cols=60 Identities=12% Similarity=0.091 Sum_probs=42.1
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 12 ~~l~V~nl~~~~----t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~ 73 (103)
T 2dgu_A 12 KVLFVRNLANTV----TEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGE 73 (103)
T ss_dssp CCEEEECCCTTC----CHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHHHCCCccCCC
Confidence 456888886522 234577888999999998874 4556777899999988874 54455444
No 166
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=35.28 E-value=67 Score=24.82 Aligned_cols=58 Identities=16% Similarity=0.289 Sum_probs=39.6
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcC--CeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHG--SIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG--~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
-++||+..-- -...+.++..+|| +|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 58 lfVgnLp~~~----te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~lng~~~~Gr 127 (156)
T 3n9u_C 58 VYVGSFSWWT----TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKVLNGE 127 (156)
T ss_dssp EEEECCCTTC----CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHSTTCEETTE
T ss_pred EEEeCCCCCC----CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 4666664421 2456778889999 89888863 2347788899999999876 55455443
No 167
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=35.24 E-value=68 Score=23.43 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=41.7
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+ . --...+.++..+||+|..+.++ |.-+|...+.+.++.++.. ++..+.+++.
T Consensus 38 ~~~~lfVgnl-~-----~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~~g~~l 103 (121)
T 2bz2_A 38 KGNTLYVYGE-D-----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQVESVQL 103 (121)
T ss_dssp CCCEEEEECS-S-----CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBCSSCBC
T ss_pred CCCEEEEcCC-C-----CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCeEE
Confidence 3344688883 2 2245677888999999888775 3456677788888888865 5555655543
No 168
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=35.17 E-value=34 Score=23.93 Aligned_cols=58 Identities=10% Similarity=0.155 Sum_probs=39.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++. ++..+.++
T Consensus 11 ~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~-~~~~~~g~ 76 (102)
T 2xs2_A 11 TVFVGGIDVRM----DETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE-SQINFHGK 76 (102)
T ss_dssp EEEEECCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT-CCCEETTE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh-CCCeECCE
Confidence 35788876422 234577788999999888763 234677778898988887 44445443
No 169
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=34.94 E-value=83 Score=25.56 Aligned_cols=62 Identities=6% Similarity=-0.028 Sum_probs=43.4
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
..-++||+....- -...+.++..+||+|..+.+. |.-+|...+++.++.++.. ++..+.+++
T Consensus 5 ~~l~V~nL~~~~~---~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~~lng~~~~g~~ 71 (205)
T 3tyt_A 5 PVLMVYGLDQSKM---NCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQK 71 (205)
T ss_dssp SEEEEECCCTTTC---CHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred CEEEEeCCCcccC---CHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHHHhCCCEECCce
Confidence 4568899872111 133577888999999999874 4568888999999988864 444555543
No 170
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=34.68 E-value=70 Score=21.24 Aligned_cols=58 Identities=10% Similarity=-0.011 Sum_probs=39.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.+
T Consensus 8 ~l~v~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 75 (87)
T 3bs9_A 8 HVFVGDLSPEI----TTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGG 75 (87)
T ss_dssp EEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 45788876422 2345778889999998887632 336777889999888875 4444443
No 171
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=33.96 E-value=59 Score=20.97 Aligned_cols=57 Identities=12% Similarity=0.149 Sum_probs=35.3
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++......+.++
T Consensus 4 ~v~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 69 (77)
T 1uaw_A 4 FIGGLSWQT----TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSK 69 (77)
T ss_dssp EEESCCSSC----CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSSC
T ss_pred EEeCCCCCC----CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCCCccCCE
Confidence 567765421 2334677788999987776532 23455678888888887643344333
No 172
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=33.58 E-value=1.2e+02 Score=20.91 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=39.9
Q ss_pred CCeeccccc-cCCCCchHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 34 LPIIGHLHL-LGQYEVPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~-~~~~~~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
--++||+.. -- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.+
T Consensus 24 ~l~V~nLp~~~~----t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~l~g~~~~g 84 (97)
T 2xnq_A 24 RLFIGNLPLKNV----SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEXESQEMNFG 84 (97)
T ss_dssp EEEEESCCSSCC----CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHHHTTSEETT
T ss_pred EEEEeCCCcccC----CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 457888864 22 234577788999999888874 4556777889999888874 4434433
No 173
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=33.49 E-value=65 Score=21.79 Aligned_cols=59 Identities=15% Similarity=0.228 Sum_probs=37.3
Q ss_pred eeccccccCCCCchHHHHHHHHHhcC--CeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHG--SIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG--~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
++||+..-- -...+.++..+|| +|..+.+.. .-+|-..+.+.++.++.. ++..+.++..
T Consensus 5 ~V~nL~~~~----t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~~l~g~~~~gr~i 75 (90)
T 3p5t_L 5 YIGNLTWWT----TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNP 75 (90)
T ss_dssp EEESCCTTC----CHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHHHGGGSCSSSCCC
T ss_pred EEeCCCCCC----CHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHHHcCCCeeCCEEE
Confidence 577775422 2345778889999 887776532 236667788888888753 5556655543
No 174
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=33.23 E-value=1.1e+02 Score=20.76 Aligned_cols=61 Identities=15% Similarity=0.048 Sum_probs=42.7
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---ccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---VPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
.|..--++||+..-. -...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.
T Consensus 15 ~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 79 (97)
T 1why_A 15 NPTTRLWVGGLGPNT----SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAKMRGFPLG 79 (97)
T ss_dssp CCCSCEEEECCCSSC----CHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHHHTTCBCS
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHHHCCCEeC
Confidence 344567889886522 2345778889999999988753 456777889988888874 544554
No 175
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=33.12 E-value=1.3e+02 Score=21.19 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=41.5
Q ss_pred CCCCCeecccccc-CCCCchHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 31 PWALPIIGHLHLL-GQYEVPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 31 P~~~P~lG~~~~~-~~~~~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
+..--++||+..- . -...+.++..+||+|..+.+. +.-+|-..+.+.++.++.. ++..+.++.
T Consensus 26 ~~~~l~V~nl~~~~~----t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 91 (110)
T 1wf1_A 26 INSRVFIGNLNTALV----KKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQT 91 (110)
T ss_dssp CSSEEEECSCCCSSC----CHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHHHTTCEETTEE
T ss_pred CCcEEEEeCCCcccC----CHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 3345688888652 2 244577888999999888762 3445666788888888854 544554443
No 176
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=32.62 E-value=1.2e+02 Score=20.92 Aligned_cols=61 Identities=7% Similarity=-0.032 Sum_probs=41.5
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
+..--++||+..-. -...+.++..+||+|..+.+. +.-+|-..+.+.++.++.. ++..+.+
T Consensus 14 ~~~~l~v~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g 83 (105)
T 2dnh_A 14 RDRKLFVGMLNKQQ----SEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMP 83 (105)
T ss_dssp CCCEEEEESCCTTC----CHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHHSSCCCCT
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHHcCCccCC
Confidence 34456888886522 244577888999999888764 2346777899999888864 4444444
No 177
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=32.55 E-value=83 Score=24.36 Aligned_cols=59 Identities=8% Similarity=0.045 Sum_probs=41.2
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.-++||+..- --...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 74 ~l~V~nLp~~----~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 142 (165)
T 1rk8_A 74 ILFVTSIHEE----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEALNGAEIMGQ 142 (165)
T ss_dssp EEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EEEEeCCCCC----CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 3688888652 2245577888999999888764 3446777888988888864 55455444
No 178
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=32.49 E-value=65 Score=22.79 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=30.7
Q ss_pred HHHHH-HhcCCeeEEeeCC--------ccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 53 FKVIS-KTHGSIFRLKLGV--------VPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 53 ~~~~~-~~yG~if~i~lg~--------~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
+.+.. .+||+|-.+.+.. .-+|-..+++.++.++.. ++..|.+|+
T Consensus 43 l~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~lng~~~~Gr~ 97 (104)
T 1jmt_A 43 VFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVIDLNNRWFNGQP 97 (104)
T ss_dssp HHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHHHCCCEECCEE
Confidence 33444 8999999998852 335666788888887765 555665554
No 179
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.04 E-value=1.3e+02 Score=20.99 Aligned_cols=60 Identities=5% Similarity=-0.084 Sum_probs=40.8
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCC-eeEEeeC----------CccEEEEcChHHHHHHHhh--c-CccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGS-IFRLKLG----------VVPAIVVNGLENIKEVLFV--K-ATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~-if~i~lg----------~~~~vvv~~p~~i~~il~~--~-~~~f~~r~ 97 (429)
--++||+..- --...+.++..+||+ |..+.+. |.-+|-..+++.++.++.. + ...+.++.
T Consensus 10 ~l~V~nLp~~----~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~~g~~~~~g~~ 83 (109)
T 2dis_A 10 RLFIGGIPKM----KKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRKLMPGRIQLWGHQ 83 (109)
T ss_dssp EEEEECCCTT----SCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTTTTTCCSCBTTBC
T ss_pred EEEEeCCCCc----CCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHHhhCCCceecCCe
Confidence 4578888642 223456788899998 9888875 2346777899999988875 2 24555543
No 180
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=31.95 E-value=1.4e+02 Score=22.01 Aligned_cols=56 Identities=7% Similarity=0.057 Sum_probs=37.7
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---C-ccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---V-VPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~-~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
++||+..= --...+.++..+||.|-.+++. | .-+|-..+.+.++.++.. ++..+.+
T Consensus 29 ~V~NL~~~----vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~~LnG~~i~g 89 (124)
T 2e5i_A 29 SIQNPLYP----ITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAALNGADIYA 89 (124)
T ss_dssp EEESCCSC----CCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHHHHTTCCCBT
T ss_pred EEcCcCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEecC
Confidence 47887541 1234688889999998777763 3 366777888877777764 5545543
No 181
>2kn4_A Immunoglobulin G-binding protein G, splicing FACT arginine/serine-rich 2, S35, splicing factor SC35,; RRM domain, cell WALL; NMR {Streptococcus SP}
Probab=31.64 E-value=1.7e+02 Score=22.16 Aligned_cols=64 Identities=8% Similarity=0.086 Sum_probs=44.2
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.+++.
T Consensus 69 ~~~~l~v~nl~~~~----~~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~l 142 (158)
T 2kn4_A 69 GMTSLKVDNLTYRT----SPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGREL 142 (158)
T ss_dssp BCCEEEEESCCTTC----CHHHHHHHHHHHSCEEEEECCCCSSCTTSCCEEEEEESBHHHHHHHHHHSTTEESSSSEE
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEeecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCeEE
Confidence 34456888886522 2345677789999999988753 246778899999999875 5555655543
No 182
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=31.15 E-value=91 Score=28.99 Aligned_cols=63 Identities=11% Similarity=0.115 Sum_probs=43.8
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
|..--||||+..-. -...+.++..+||+|..+.+. |.-+|...+++.++.++.. ++..+.++.
T Consensus 101 ~~~~lfV~nL~~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~lng~~i~gr~ 173 (437)
T 3pgw_S 101 AFKTLFVARVNYDT----TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 173 (437)
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHHcCCCEECCEE
Confidence 33457889985422 234577888899999888873 3457888899999988865 555555544
No 183
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.03 E-value=1.4e+02 Score=20.93 Aligned_cols=63 Identities=13% Similarity=0.123 Sum_probs=42.8
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC------ccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV------VPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~------~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
+..--++||+..-- -...+.++..+||+|..+.+.. .-+|...+.+.++.++.. ++..+.++.
T Consensus 21 ~~~~l~V~nLp~~~----t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 90 (109)
T 1x4a_A 21 NDCRIYVGNLPPDI----RTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYR 90 (109)
T ss_dssp CSSEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 33456888886522 2455778889999998887642 336788899999888854 444554443
No 184
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=31.01 E-value=65 Score=25.95 Aligned_cols=59 Identities=10% Similarity=0.155 Sum_probs=41.5
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
-++||+..- -....+.++..+||+|-.+.+. |.-+|-..+.+.++.++...+..+.+++
T Consensus 112 l~V~nLp~~----~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~~~~~~Gr~ 178 (193)
T 2voo_A 112 VYIKGFPTD----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKETD 178 (193)
T ss_dssp EEEECCCTT----CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCTTCEETTEE
T ss_pred EEecCCCCc----CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhCCCeECCEE
Confidence 477887542 2356688889999999888764 3456778899999999876544555443
No 185
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=30.76 E-value=1.4e+02 Score=21.17 Aligned_cols=61 Identities=11% Similarity=0.004 Sum_probs=41.4
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.++.
T Consensus 26 ~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 96 (115)
T 2cpz_A 26 ANLFIYHLPQEF----GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKR 96 (115)
T ss_dssp CCEEEESCCSSC----CHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHHHTTCEETTEE
T ss_pred cEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 456889886522 2356778889999998877632 235677889988888865 554555443
No 186
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.68 E-value=1e+02 Score=21.22 Aligned_cols=63 Identities=11% Similarity=0.093 Sum_probs=42.3
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
.+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 10 ~~~~~l~V~nLp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 82 (102)
T 2cqb_A 10 TTKRVLYVGGLAEEV----DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGR 82 (102)
T ss_dssp CCCSCEEEESCCSSC----CHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHHHTTEEETTE
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 344567889886522 2456778889999998888732 235666788888888864 44455444
No 187
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=30.51 E-value=1.6e+02 Score=23.53 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=40.5
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.+++
T Consensus 31 l~V~nLp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~~~~~~g~~ 99 (216)
T 2qfj_A 31 VYVGSIYYEL----GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRN 99 (216)
T ss_dssp EEEECCCTTC----CHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHHHSSCCCC-CC
T ss_pred EEEECCCCCC----CHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHHccCCeeCCee
Confidence 5777775421 234577888999999988873 3456888899999999874 444554443
No 188
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=30.15 E-value=1.6e+02 Score=21.56 Aligned_cols=51 Identities=10% Similarity=0.021 Sum_probs=36.7
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~ 88 (429)
--++||+..-. -...+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 65 ~l~v~nlp~~~----~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 65 VLYVGGLAEEV----DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEEEECCCTTC----CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEEEeCCCCC----CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 45778775422 235577888999999999873 2346778899999888864
No 189
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=29.48 E-value=1.5e+02 Score=20.93 Aligned_cols=64 Identities=11% Similarity=0.002 Sum_probs=43.3
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
+.+..--++||+..-- -...+.++..+||+|..+.+.. .-+|...+.+.++.++.. ++..+.++
T Consensus 12 ~~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 85 (115)
T 2dgo_A 12 TSNHFHVFVGDLSPEI----TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGR 85 (115)
T ss_dssp STTCEEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTCEETTE
T ss_pred CCCCcEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 3444457888886522 2445778889999998887642 336777899999998864 44455444
No 190
>2dng_A Eukaryotic translation initiation factor 4H; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=29.06 E-value=1e+02 Score=21.33 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=44.1
Q ss_pred CCCCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 26 DLTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 26 ~~ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
..|+.|..--++||+..-- -...+.++..+|| |..+.+. |.-+|-..+++.++.++.-++..+.++
T Consensus 9 ~~~~~~~~~l~V~nLp~~~----t~~~l~~~F~~~g-i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~~g~ 83 (103)
T 2dng_A 9 ELPTEPPYTAYVGNLPFNT----VQGDIDAIFKDLS-IRSVRLVRDKDTDKFKGFCYVEFDEVDSLKEALTYDGALLGDR 83 (103)
T ss_dssp CCCSSSCEEEEEESCCTTC----CHHHHHHHTTTSC-EEEEEEEECSSSCSEEEEEEEEESSHHHHHHHGGGTTCEETTE
T ss_pred CCCCCCCeEEEEeCCCCCC----CHHHHHHHHHhCC-ceEEEEeecCCCCccceEEEEEECCHHHHHHHHhhCCCeECCe
Confidence 3445555567899986522 2345777788897 8887764 133677889999999884455555544
Q ss_pred C
Q psy1301 97 P 97 (429)
Q Consensus 97 ~ 97 (429)
+
T Consensus 84 ~ 84 (103)
T 2dng_A 84 S 84 (103)
T ss_dssp E
T ss_pred E
Confidence 3
No 191
>2e5j_A Methenyltetrahydrofolate synthetase domain containing; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.88 E-value=1.4e+02 Score=20.34 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=38.9
Q ss_pred CCCeeccccccCCCCchHHHHHHHHHhcCCe-eEEeeC---CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 33 ALPIIGHLHLLGQYEVPYQAFKVISKTHGSI-FRLKLG---VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 33 ~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~i-f~i~lg---~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.--++||+..-- -...+.++..+||+| ..+..+ +.-+|-..+++.++.++.. ++..+.++.
T Consensus 20 ~~l~V~nL~~~~----t~~~l~~~F~~~G~v~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 85 (97)
T 2e5j_A 20 ADVYVGNLPRDA----RVSDLKRALRELGSVPLRLTWQGPRRRAFLHYPDSAAAQQAVSCLQGLRLGTDT 85 (97)
T ss_dssp CEEEEECCCTTC----CHHHHHHHHHHTTCCCSEEEEETTTTEEEEECSSHHHHHHHHHHHTTCCSSSSC
T ss_pred CEEEEeCCCCcC----cHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 346788886422 244577888999997 333222 3456777888888888865 555555544
No 192
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=28.87 E-value=1.3e+02 Score=19.86 Aligned_cols=58 Identities=9% Similarity=0.198 Sum_probs=38.7
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhc----C-------CeeEEeeC---CccEEEEcChHHHHHHHhhcCccccC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTH----G-------SIFRLKLG---VVPAIVVNGLENIKEVLFVKATDFDG 95 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~y----G-------~if~i~lg---~~~~vvv~~p~~i~~il~~~~~~f~~ 95 (429)
--++||+..-. -...+.++..+| | +|..+.+. |.-+|-..+++.++.++.-++..+.+
T Consensus 8 ~l~V~nLp~~~----t~~~l~~~F~~~~~~~g~~~~~~~~v~~~~~~~~kg~afV~f~~~~~a~~A~~l~g~~~~g 79 (87)
T 2hzc_A 8 RLYVGNIPFGI----TEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQG 79 (87)
T ss_dssp EEEEESCCTTC----CHHHHHHHHHHHHHHTTCCSSSSCSEEEEEECSSSSEEEEEESSHHHHHHHGGGTTCEETT
T ss_pred EEEEeCCCCCC----CHHHHHHHHHHHhhhcccccCCCCcceEEEecCCCcEEEEEcCCHHHHHHHHhcCCCEECC
Confidence 34788876422 234566677777 8 89988875 44567778999999888435544443
No 193
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=28.75 E-value=1.2e+02 Score=21.66 Aligned_cols=56 Identities=9% Similarity=0.027 Sum_probs=38.3
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCcccc
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFD 94 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~ 94 (429)
-++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.
T Consensus 43 l~V~nlp~~~----t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 108 (118)
T 2khc_A 43 LFIYHLPQEF----TDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVG 108 (118)
T ss_dssp EEEECSCTTC----CHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHHCCCCEET
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHHcCCCEEC
Confidence 5778775422 2355778889999999888742 346777889988888874 443443
No 194
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=28.75 E-value=1.5e+02 Score=20.82 Aligned_cols=55 Identities=7% Similarity=-0.159 Sum_probs=40.1
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---CccEEEEcChHHHHHHHhh
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---VVPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---~~~~vvv~~p~~i~~il~~ 88 (429)
.|...-++||+..=- --.-+.++..+||+|-.+.+. |.-+|-..+.+.++.++..
T Consensus 19 ~ps~~l~V~NLp~~~----te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 19 PASPVVHIRGLIDGV----VEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp CCCSEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCCC----CHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 455678999986522 234567888999999888763 4567777889888888764
No 195
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=28.64 E-value=93 Score=23.72 Aligned_cols=64 Identities=13% Similarity=0.129 Sum_probs=44.1
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+..-- -...+.++..+||+|..+.+. +.-+|...+++.++.++.. ++..+.++..
T Consensus 38 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 111 (156)
T 1h2v_Z 38 KSCTLYVGNLSFYT----TEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYINGTRLDDRII 111 (156)
T ss_dssp TCCEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHTTTSEETTEEC
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCEECCeEE
Confidence 34457888886422 245577888999999888872 1336778899999998875 5555555443
No 196
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.42 E-value=1.4e+02 Score=20.40 Aligned_cols=64 Identities=14% Similarity=0.209 Sum_probs=43.2
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.+++.
T Consensus 11 ~~~~l~v~nLp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 84 (102)
T 1x5s_A 11 DEGKLFVGGLSFDT----NEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQI 84 (102)
T ss_dssp CCSEEEEESCCTTC----CHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHHHTTCCTTSCCC
T ss_pred CCCEEEEECCCCCC----CHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCeEE
Confidence 34456888886422 2345777888999998888753 335677888988888854 5555655543
No 197
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.21 E-value=1.4e+02 Score=20.00 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=43.9
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.|..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.+++.
T Consensus 6 ~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~l 72 (90)
T 2dnq_A 6 SGMVKLFIGNLPREA----TEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRNLHHYKLHGVNI 72 (90)
T ss_dssp SCCEEEEEESCCSSC----CHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHHHTTCBCSSCBC
T ss_pred CCCeEEEEeCCCCCC----CHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHHhcCCccCCcEE
Confidence 334456788886522 234577888999999888764 4556777899999888864 4445555543
No 198
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=27.90 E-value=1e+02 Score=23.49 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=40.6
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
--++||+..- --...+.++..+||+|..+.+.. .-+|-..+++.++.++..++..+.+++
T Consensus 89 ~l~V~nlp~~----~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~~g~~ 157 (167)
T 2cjk_A 89 KIFVGGIGPD----VRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRK 157 (167)
T ss_dssp EEEEEEECTT----CCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSEECSSSSC
T ss_pred eEEECCCCCC----CCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCCEEeCCeE
Confidence 4567777542 22345777888999998888642 335777899999998875554554443
No 199
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.41 E-value=69 Score=21.47 Aligned_cols=49 Identities=4% Similarity=-0.017 Sum_probs=34.8
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHH
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVL 86 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il 86 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.+.
T Consensus 7 ~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~ 59 (88)
T 1wf0_A 7 GVFVGRCTGDM----TEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLC 59 (88)
T ss_dssp EEEEESCCSSS----CHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTT
T ss_pred EEEEeCCCCCC----CHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHh
Confidence 35778875422 234577888999999999875 45577788888887643
No 200
>2e5g_A U6 snRNA-specific terminal uridylyltransferase 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.30 E-value=1.4e+02 Score=20.13 Aligned_cols=59 Identities=8% Similarity=0.081 Sum_probs=39.1
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC----ccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV----VPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~----~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
-++||+..- --...+.++..+||+|-.+..-. .-+|-..+++.++.++.-++..+.++.
T Consensus 11 l~V~nl~~~----~t~~~l~~~F~~~G~v~~v~~~~~~g~~afV~f~~~~~a~~ai~l~g~~~~g~~ 73 (94)
T 2e5g_A 11 VFVSGFPRG----VDSAQLSEYFLAFGPVASVVMDKDKGVFAIVEMGDVGAREAVLSQSQHSLGGHR 73 (94)
T ss_dssp EEEECCCTT----CCHHHHHHHGGGTSCEEEEEECSSSCCEEEEEESSHHHHHHHHTCSCCEETTEE
T ss_pred EEEECCCCC----CCHHHHHHHHHhcCCeEEEEEcCCCCcEEEEEECCHHHHHHHHhcCCeEECCEE
Confidence 467887542 22456778889999988874322 235666789999988875555555543
No 201
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=27.20 E-value=1.6e+02 Score=20.40 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=38.7
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~ 88 (429)
.+..--++||+..-- -...+.++..+||+|..+.+.. .-+|-..+.+.++.++..
T Consensus 11 ~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 11 HDAIKLFIGQIPRNL----DEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp TTCEEEEEESCCTTC----CHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 333456888886522 2345778889999999888743 346777888888888864
No 202
>2ki2_A SS-DNA binding protein 12RNP2; HP0827, RRM, SS-DNA binding proteins, RNA binding protein/SS-DNA binding protein complex; NMR {Helicobacter pylori}
Probab=26.73 E-value=93 Score=20.82 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=35.4
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
++||+..- --...+.++..+||+|..+.+.. .-+|-..+.+ ++.++.. ++..+.+++
T Consensus 5 ~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~-a~~a~~~l~g~~~~g~~ 71 (90)
T 2ki2_A 5 YVGNLVYS----ATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQEES-VSEAIAKLDNTDFMGRT 71 (90)
T ss_dssp EEEEECTT----SSHHHHTTTHHHHTCCSEEEECCCSSSCCCCEEEEEEECTTH-HHHHHHTSCSSCCSSSS
T ss_pred EECCCCCC----CCHHHHHHHHHhcCCEEEEEEEEcCCCCCcceEEEEEECCHH-HHHHHHHhCCCEECCeE
Confidence 56666542 12344667778999998888742 2356778888 6666654 444554443
No 203
>2cpx_A Hypothetical protein FLJ11016; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.97 E-value=1.2e+02 Score=21.43 Aligned_cols=65 Identities=11% Similarity=0.045 Sum_probs=42.1
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCe----eEEeeC-----CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSI----FRLKLG-----VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~i----f~i~lg-----~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
.|..--++||+..- --...+.++..+||+| ..+.+. |.-+|-..+.+.++.++.. ++..+.+++.
T Consensus 23 ~~~~~l~V~nLp~~----~t~~~l~~~f~~~G~v~~~~~~~~~~~g~~~g~afV~f~~~~~a~~Ai~~l~g~~~~g~~l 97 (115)
T 2cpx_A 23 EPNKVLYLKNLSPR----VTERDLVSLFARFQEKKGPPIQFRMMTGRMRGQAFITFPNKEIAWQALHLVNGYKLYGKIL 97 (115)
T ss_dssp SCCSEEEEECCCTT----CCHHHHHHHTHHHHHSSSSCCEEEEECSSSCSEEEEECSSHHHHHHHHHHSTTCBCSSCBC
T ss_pred CCCCEEEEeCCCCC----CCHHHHHHHHHHhCCccceEEEEEcCCCccceEEEEEECCHHHHHHHHHHhCCCEeCCcEE
Confidence 34456789998642 2234566778899987 555432 3446777899999988875 5555655543
No 204
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=25.52 E-value=1.9e+02 Score=20.78 Aligned_cols=60 Identities=12% Similarity=0.181 Sum_probs=41.0
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.+++
T Consensus 37 ~l~V~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 105 (124)
T 2kt5_A 37 KLLVSNLDFGV----SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGRP 105 (124)
T ss_dssp EEEEESCCSSC----CHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHHHHTTEESSSCE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHHHcCCCEECCcE
Confidence 45788875422 234577888999999888763 3446777899999888874 554555543
No 205
>3q2s_C Cleavage and polyadenylation specificity factor S; CFIM, CFIM25, CFIM68, CPSF5, CPSF6, CPSF, 3' END processing, processing, cleavage factor; 2.90A {Homo sapiens} PDB: 3q2t_C
Probab=25.32 E-value=1.3e+02 Score=24.88 Aligned_cols=58 Identities=16% Similarity=0.229 Sum_probs=39.3
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcC--CeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHG--SIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG--~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
-+|||+..-. -...+.++..+|| .|..+.+.. .-+|...+.+.++.++.. ++..+..+
T Consensus 71 lfVgnL~~~~----te~~L~~~F~~~G~~~v~~v~i~~d~~tg~skGfaFV~f~~~~~a~~Ai~~lng~~~~Gr 140 (229)
T 3q2s_C 71 LYIGNLTWWT----TDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQ 140 (229)
T ss_dssp EEEESCCTTC----CHHHHHHHHHTTTCCCEEEEEEEECTTTCCEEEEEEEEESCTTHHHHHHTTSTTSCBTTB
T ss_pred EEEeCCCCCC----CHHHHHHHHHHHCCcceEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCeECCE
Confidence 4788875422 2446778889999 898887632 237788899889888874 44444443
No 206
>1qm9_A Polypyrimidine tract-binding protein; ribonucleoprotein, RNP, RNA, spicing, translation; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1
Probab=24.67 E-value=1.8e+02 Score=22.91 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=41.2
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC----CccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG----VVPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg----~~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
++||+..-. --...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++.
T Consensus 7 ~v~nlp~~~---~~~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~g~~l 71 (198)
T 1qm9_A 7 LVSNLNPER---VTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPI 71 (198)
T ss_dssp EEECCCSSS---CCHHHHHHHHHTTCCCSEEECSTTCSSCCEEECTTTHHHHHHHHHHTTCCCSSCCC
T ss_pred EEeCCCccc---CCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCeecCeEE
Confidence 567765411 1235577888999999999875 4567888899999998863 5555655543
No 207
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=24.51 E-value=60 Score=23.02 Aligned_cols=39 Identities=10% Similarity=0.029 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCeeEEeeCC-ccEEEEcChHHHHHHHhh
Q psy1301 50 YQAFKVISKTHGSIFRLKLGV-VPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 50 ~~~~~~~~~~yG~if~i~lg~-~~~vvv~~p~~i~~il~~ 88 (429)
..-+.++...||.|.--|+-. .-.+++.+++.+++++..
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 456778889999877777754 557899999999999984
No 208
>2cpy_A RNA-binding protein 12; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.56 E-value=1.1e+02 Score=21.90 Aligned_cols=63 Identities=3% Similarity=-0.099 Sum_probs=41.6
Q ss_pred CCCCCCCeeccccccCCCCchHHHHHHHHHhcCCe-eEEeeC--------CccEEEEcChHHHHHHHhhcCccccC
Q psy1301 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSI-FRLKLG--------VVPAIVVNGLENIKEVLFVKATDFDG 95 (429)
Q Consensus 29 pgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~i-f~i~lg--------~~~~vvv~~p~~i~~il~~~~~~f~~ 95 (429)
+.+..--++||+..-- -...+.++..+||.| -.+.+. |.-+|-..+.+.++.++..++..+.+
T Consensus 12 ~~~~~~l~V~nLp~~~----t~~~l~~~F~~~g~v~~~v~i~~d~~g~~~G~afV~F~~~~~a~~Al~~~~~~~~g 83 (114)
T 2cpy_A 12 NSAKVCAHITNIPFSI----TKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLHRKKLNG 83 (114)
T ss_dssp CSCCCEEEEESCCTTS----CHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGCSEEETT
T ss_pred CCCccEEEEeCcCCcC----CHHHHHHHHHhCCCcCCeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCCCccCC
Confidence 4444556888886522 234577788899998 444442 45578888999999998765444433
No 209
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=23.39 E-value=65 Score=15.60 Aligned_cols=12 Identities=50% Similarity=0.709 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHH
Q psy1301 258 NVQAKIQKEVDA 269 (429)
Q Consensus 258 ~~~~~l~~Ei~~ 269 (429)
.+|+++|+|+..
T Consensus 8 nlqkkirkelkq 19 (26)
T 1m46_B 8 NLQKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 578999998764
No 210
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=23.16 E-value=41 Score=28.92 Aligned_cols=30 Identities=27% Similarity=0.529 Sum_probs=24.4
Q ss_pred CCCCEEeechhhhccCCCCCCCC--------------CCCCCCC
Q psy1301 320 KKDTMIFLNNYDLNMSPELWSEP--------------ENFQPER 349 (429)
Q Consensus 320 pkGt~v~~~~~~~~~d~~~~~~p--------------~~F~PeR 349 (429)
|.||.|+.....-+.||+.|.+| -.|||..
T Consensus 64 ~~GTLvmPt~t~~~~dp~~w~~ppvp~~~~~~ir~~~p~fDp~~ 107 (268)
T 3ijw_A 64 EEGTIIMPTQSSDLSDPKHWSRPPVPEEWWQIIRDNVPAFEPHI 107 (268)
T ss_dssp TTSEEEEECCCGGGSCGGGCCSSCCCHHHHHHHHHHSCCBCTTT
T ss_pred CCCeEEEeccccccCChhhhcCCCCcHHHHHHHHhhCCCCCccc
Confidence 57998888887778899999776 4788875
No 211
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=23.03 E-value=1.2e+02 Score=24.53 Aligned_cols=64 Identities=14% Similarity=0.107 Sum_probs=41.1
Q ss_pred CCCCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccC
Q psy1301 28 TPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDG 95 (429)
Q Consensus 28 ppgP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~ 95 (429)
|..|..--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.+
T Consensus 11 p~~p~~tlfVgnLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~~~~~~~~g 84 (213)
T 4f02_A 11 PSYPMASLYVGDLHPDV----TEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKG 84 (213)
T ss_dssp ----CCEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEeCCCCCC----CHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHHhhhhhcCC
Confidence 33444556899986522 245677888999999888763 2346888899999988865 3334433
No 212
>2e44_A Insulin-like growth factor 2 mRNA binding protein 3; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.96 E-value=1.8e+02 Score=19.59 Aligned_cols=62 Identities=5% Similarity=0.014 Sum_probs=41.7
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEe-eCCc-----cEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLK-LGVV-----PAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~-lg~~-----~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
..--++||+..-. -...+.++..+||+|-.+. +... -+|-..+++.++.++.. ++..+.+++
T Consensus 15 ~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~~~~i~~~~~~~~afV~f~~~~~a~~Ai~~l~g~~~~g~~ 83 (96)
T 2e44_A 15 IRKLQIRNIPPHL----QWEVLDSLLVQYGVVESCEQVNTDSETAVVNVTYSSKDQARQALDKLNGFQLENFT 83 (96)
T ss_dssp CCCEEEEEECSSS----CHHHHHHHHHHHSCEEEEEEECCSSSSEEEEEEESSHHHHHHHHHHHTTCBCSSCB
T ss_pred CCEEEEEcCCCCC----CHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 3457899986522 2445778889999998883 4322 46777899988888864 554555544
No 213
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.94 E-value=1.8e+02 Score=19.49 Aligned_cols=61 Identities=13% Similarity=0.184 Sum_probs=41.7
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC-ccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV-VPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~-~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
..--++||+..- --...+.++..+||+|..+.+.. .-+|-..+++.++.++.. ++..+.++
T Consensus 10 ~~~l~V~nLp~~----~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~ 72 (92)
T 2dgt_A 10 STKLHVGNISPT----CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGK 72 (92)
T ss_dssp SEEEEEESCCSS----CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHHHTTEEETTE
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 345688888642 22455778889999998888753 445667788888888864 54455444
No 214
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=22.88 E-value=1.7e+02 Score=22.06 Aligned_cols=50 Identities=16% Similarity=0.136 Sum_probs=36.4
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV 88 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~ 88 (429)
-++||+..- --...+.++..+||+|..+.+. |.-+|-..+++.++.++.+
T Consensus 6 l~v~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 64 (167)
T 2cjk_A 6 MFIGGLNWD----TTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64 (167)
T ss_dssp EEECSCCTT----CCHHHHHHHHTTTCCEEEEECCCCTTTSSCCSCEEEEESSTHHHHHHHHS
T ss_pred EEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEEECCCCCCccceEEEEEccHHHHHHHHhc
Confidence 356777542 1244577888999999999874 3456888899999999875
No 215
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.82 E-value=1.9e+02 Score=19.83 Aligned_cols=62 Identities=10% Similarity=-0.064 Sum_probs=42.2
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
+..--++||+..-- -...+.++..+||+|..+.+. +.-+|-..+++.++.++.. ++..+.++
T Consensus 14 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 83 (103)
T 2cqi_A 14 QPRTLYVGNLSRDV----TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGK 83 (103)
T ss_dssp CCCEEEEESCCTTC----CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred CCCEEEEeCCCccC----CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHHHhCCCCcCCC
Confidence 34457888886522 244577888999999888764 2446777899999888873 44445444
No 216
>2lea_A Serine/arginine-rich splicing factor 2; SR protein, RNA binding protein; NMR {Homo sapiens} PDB: 2leb_A 2lec_A
Probab=22.77 E-value=2.3e+02 Score=20.86 Aligned_cols=61 Identities=8% Similarity=0.106 Sum_probs=43.1
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---------ccEEEEcChHHHHHHHhh-cCccccCCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---------VPAIVVNGLENIKEVLFV-KATDFDGRPN 98 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---------~~~vvv~~p~~i~~il~~-~~~~f~~r~~ 98 (429)
--++||+..- --...+.++..+||+|..+.+.. .-+|-..+.+.++.++.. ++..+.+++.
T Consensus 49 ~l~V~nLp~~----~te~~L~~~F~~~G~i~~v~i~~~~~~g~~~G~afV~F~~~~~A~~Ai~~l~g~~i~g~~l 119 (135)
T 2lea_A 49 SLKVDNLTYR----TSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGREL 119 (135)
T ss_dssp CEEEECCCSS----CHHHHHHHHHGGGSCCSEEECCCCSSSSSCCSCCEEECSCHHHHHHHHTTTTTCCSSSSCC
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHcCCCEECCEEE
Confidence 4678888642 23456778889999999988743 347788899999998875 5545555543
No 217
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=22.41 E-value=1.2e+02 Score=22.81 Aligned_cols=57 Identities=12% Similarity=0.118 Sum_probs=38.5
Q ss_pred eeccccccCCCCchHHHHHHHHHhcCCeeEEeeC--------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 36 IIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG--------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 36 ~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg--------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.++
T Consensus 4 ~V~nlp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~~l~~~~~~g~ 69 (166)
T 3md3_A 4 YVGNLDKAI----TEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENN 69 (166)
T ss_dssp EEEEEETTC----CHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred EECCCCCcC----CHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHHHcCCCccCCC
Confidence 567765321 234577888999999888873 3356778899999988843 44455444
No 218
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=22.36 E-value=1.2e+02 Score=20.82 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=38.3
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC----------ccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV----------VPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~----------~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
-++||+..--. ...+.++..+|| |..+.+.. .-+|-..+.+.++.++.-++..+.++.
T Consensus 22 l~V~nLp~~~t----~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~Ai~l~g~~~~g~~ 89 (100)
T 2j76_E 22 AFLGNLPYDVT----EESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESLGNRR 89 (100)
T ss_dssp EEESCCSSCCS----SSHHHHHSCSSC-EEEEECSCCTTTTCCCCSCEEEEECCHHHHHHHHHTTTCCBTTBC
T ss_pred EEEeCCCCCCC----HHHHHHHHHhcC-CeEEEEEecCCcCCccCeEEEEEECCHHHHHHHHhcCCCEECCeE
Confidence 46788754222 224567778999 99988742 346778899999988844555555443
No 219
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=22.34 E-value=2.3e+02 Score=20.72 Aligned_cols=60 Identities=5% Similarity=-0.032 Sum_probs=40.8
Q ss_pred CCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 34 LPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 34 ~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
--++||+..-- -...+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++.
T Consensus 44 ~l~V~nLp~~~----~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 113 (139)
T 1u6f_A 44 NLMVNYIPTTV----DEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAGLNGFNILNKR 113 (139)
T ss_dssp EEEEESCSTTC----CHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHHTTTEECSSCE
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 45788875422 234577888999999888763 2346778899999988874 554555543
No 220
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.01 E-value=2.3e+02 Score=20.48 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=41.4
Q ss_pred CCCCCCee--ccccccCCCCchHHHHHHHHHhcCCeeEEeeCC---ccEEEEcChHHHHHHHhh-cCccc
Q psy1301 30 MPWALPII--GHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV---VPAIVVNGLENIKEVLFV-KATDF 93 (429)
Q Consensus 30 gP~~~P~l--G~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~---~~~vvv~~p~~i~~il~~-~~~~f 93 (429)
-|..--++ ||+..= --...+++...+||.|-.+.+.. .-+|-..+++.++.++.. ++..+
T Consensus 23 ~pt~~L~V~Ng~L~~~----~te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~lnG~~~ 88 (114)
T 2cq2_A 23 YATQSLVVANGGLGNG----VSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVTLNGKEV 88 (114)
T ss_dssp SCCSEEEEETCTGGGT----CCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHHTTTCEE
T ss_pred CCCCEEEEECCCCCCC----CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEE
Confidence 44556788 667542 12456788889999999888752 456777888888888875 44333
No 221
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=21.84 E-value=1.3e+02 Score=23.65 Aligned_cols=62 Identities=13% Similarity=0.171 Sum_probs=43.0
Q ss_pred CCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhhcCccccCC
Q psy1301 31 PWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFVKATDFDGR 96 (429)
Q Consensus 31 P~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~~~~~f~~r 96 (429)
+..--++||+..-- -...+.++..+||+|..+.+. |.-+|...+++.++.++...+..+.++
T Consensus 12 ~~~~l~V~nLp~~~----te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~~g~ 82 (196)
T 1l3k_A 12 QLRKLFIGGLSFET----TDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGR 82 (196)
T ss_dssp GGGEEEEESCCTTC----CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEETTE
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEECCE
Confidence 33456889886522 244577888999999887753 234688899999999997755445443
No 222
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.71 E-value=1.8e+02 Score=19.27 Aligned_cols=64 Identities=8% Similarity=0.102 Sum_probs=43.8
Q ss_pred CCCCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeCC-ccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 30 MPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGV-VPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 30 gP~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg~-~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
.+..--++||+..-- -...+.++..+||+|-.+.+.. .-+|-..+++.++.++.. ++..+.++.
T Consensus 7 ~~~~~l~V~nlp~~~----t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~l~g~~~~g~~ 72 (90)
T 2dnp_A 7 GNTWKIFVGNVSAAC----TSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKR 72 (90)
T ss_dssp CCSCCEEEESCCTTC----CHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHHHTTCEETTEE
T ss_pred CCCCEEEEeCCCCCC----CHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 344456888886522 2345777888999998888753 556777889888888874 554555543
No 223
>1b7f_A Protein (SXL-lethal protein), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3; splicing regulation, RNP domain, RNA complex; 2.60A {Drosophila melanogaster} SCOP: d.58.7.1 d.58.7.1 PDB: 3sxl_A* 1sxl_A 2sxl_A
Probab=20.53 E-value=2.3e+02 Score=21.26 Aligned_cols=59 Identities=8% Similarity=0.019 Sum_probs=40.3
Q ss_pred CeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC---------CccEEEEcChHHHHHHHhh-cCccccCCC
Q psy1301 35 PIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG---------VVPAIVVNGLENIKEVLFV-KATDFDGRP 97 (429)
Q Consensus 35 P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg---------~~~~vvv~~p~~i~~il~~-~~~~f~~r~ 97 (429)
-++||+..-- -...+.++..+||+|..+.+. |.-+|-..+++.++.++.. ++..+.+++
T Consensus 6 l~v~nlp~~~----~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~a~~~l~~~~~~g~~ 74 (168)
T 1b7f_A 6 LIVNYLPQDM----TDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKR 74 (168)
T ss_dssp EEEECCCTTC----CHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred EEEeCCCCCC----CHHHHHHHHHhcCCeeEEEEEEeCCCCccceEEEEEECCHHHHHHHHHhcCCCEeCCcE
Confidence 4677775421 234577888999999888864 2456778899999998863 444554443
No 224
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=20.28 E-value=48 Score=28.63 Aligned_cols=23 Identities=17% Similarity=0.423 Sum_probs=19.1
Q ss_pred CCCCEEeechhhhccCCCCCCCC
Q psy1301 320 KKDTMIFLNNYDLNMSPELWSEP 342 (429)
Q Consensus 320 pkGt~v~~~~~~~~~d~~~~~~p 342 (429)
|.||.|+.....-+.||+.|.+|
T Consensus 62 ~~GTLvmPtft~~~~dp~~w~~~ 84 (273)
T 2nyg_A 62 EEGTIVMPSQSVELSDPKEWGNP 84 (273)
T ss_dssp TTSEEEEECCCTTSSCGGGCCSS
T ss_pred CCCeEEEeccccccCChhhhcCC
Confidence 57888888888888899988765
No 225
>2ghp_A U4/U6 snRNA-associated splicing factor PRP24; RNA chaperone, RNA binding domain, RNA recognition motif, SP factor, snRNP, spliceosome; 2.70A {Saccharomyces cerevisiae} SCOP: d.58.7.1 d.58.7.1 d.58.7.1 PDB: 2go9_A 2kh9_A
Probab=20.22 E-value=1.5e+02 Score=25.33 Aligned_cols=62 Identities=8% Similarity=0.004 Sum_probs=43.6
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC-------CccEEEEcChHHHHHHHhhcCccccCCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG-------VVPAIVVNGLENIKEVLFVKATDFDGRP 97 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg-------~~~~vvv~~p~~i~~il~~~~~~f~~r~ 97 (429)
..--++||+..=- -...+.++..+||+|..+.+. |.-+|-..+++.++.++..++..+.+++
T Consensus 41 ~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~A~~A~~~~~~~~~g~~ 109 (292)
T 2ghp_A 41 LTTVLVKNLPKSY----NQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQNE 109 (292)
T ss_dssp -CEEEEEEECTTC----CHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHTTTTCEETTEE
T ss_pred CCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEEECCHHHHHHHHHhCCcEeCCcE
Confidence 3457889986522 234577888999999888763 3457888999999999965555565544
No 226
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=20.15 E-value=1.5e+02 Score=25.06 Aligned_cols=65 Identities=11% Similarity=0.084 Sum_probs=42.7
Q ss_pred CCCCeeccccccCCCCchHHHHHHHHHhcCCeeEEeeC------CccEEEEcChHHHHHHHhh-cCccccCC
Q psy1301 32 WALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLG------VVPAIVVNGLENIKEVLFV-KATDFDGR 96 (429)
Q Consensus 32 ~~~P~lG~~~~~~~~~~~~~~~~~~~~~yG~if~i~lg------~~~~vvv~~p~~i~~il~~-~~~~f~~r 96 (429)
..--++||+..--...+....+.++..+||+|..+.+. |.-+|-..+.+.++.++.. ++..+.++
T Consensus 9 ~~~l~V~nlp~~~~~~~l~~~L~~~F~~~G~i~~v~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 80 (282)
T 3pgw_A 9 NHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK 80 (282)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhccCCeEEEEEcCCCCcceEEEEEECCHHHHHHHHHHhcCCeeCCc
Confidence 34568899864222122333466888999999888864 3457788899999888854 44445444
Done!