RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1301
(429 letters)
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 169 bits (428), Expect = 2e-48
Identities = 87/465 (18%), Positives = 169/465 (36%), Gaps = 67/465 (14%)
Query: 27 LTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVL 86
L P P LP++G+L + + ++F + + +G +F + LG P +V+ G + I+E L
Sbjct: 3 LPPGPSPLPVLGNLLQMDRKG-LLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 61
Query: 87 FVKATDFDGRPNISRYNDLFSGN--------------RENCKKLSQMSKAIRAFVMENLM 132
+A F GR I+ + +F G R + + R+
Sbjct: 62 VDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQE 121
Query: 133 NDRIVKYERNERNNN--DEEDYVDSLL----------ERVYNNRDKAKMDLNTALFSLED 180
R + E + D S+ +R L+ S
Sbjct: 122 EARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSL 181
Query: 181 IVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLRMSGVHKLK------------- 227
I + + L + +E++ + H+
Sbjct: 182 ISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVY 241
Query: 228 --------------------VIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEV 267
++ L G S + ++ +P+V ++QKE+
Sbjct: 242 LLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI 301
Query: 268 DAITLISRDVTLADRKQMPYTEATILESIRM--IASPIVPHVATQNSSIGGFEVKKDTMI 325
+ + R L DR +MPYT+A I E R+ + VPH T+++ G+ + K+T +
Sbjct: 302 EQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 361
Query: 326 FLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFT 385
F P + P F P F++A+G + + E F+PFS G+R C+G + + F
Sbjct: 362 FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFL 421
Query: 386 TLASLFQSYDLKKLPGQQYKVPI----GDLALPYNTFRFNFSPRN 426
++ Q++ + P + + + +++ F R+
Sbjct: 422 FFTTILQNFSI-ASPVPPEDIDLTPRESGVGNVPPSYQIRFLARH 465
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 168 bits (425), Expect = 7e-48
Identities = 91/462 (19%), Positives = 170/462 (36%), Gaps = 64/462 (13%)
Query: 29 PMPWALPIIGHLHLLGQY-EVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLF 87
P P LP IG+++ L E+P+ + S+ +G IF L LG + +V+NG + +KE L
Sbjct: 2 PGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLV 61
Query: 88 VKATDFDGRPNISRYNDLFSGN--------------RENCKKLSQMSKAIRAFVMENLMN 133
++ F RP + + + R + + ++
Sbjct: 62 HQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILE 121
Query: 134 DRIVKYERNERNNNDEEDYVDSLLERVYN---------NRDKAKMDLNTALFSLEDIVGG 184
+ + E D+ + V N D + + V
Sbjct: 122 ETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVEL 181
Query: 185 HTAISNFIMKTLGFLVNHPNVQ----AKIQKEVDAITLRMSGVHKLKVIFSLED------ 234
+ S F+ ++ P + + V R+ + L
Sbjct: 182 AASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAY 241
Query: 235 ---------------------------IVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEV 267
I+ G +N + + F+ +PN+Q ++QKE+
Sbjct: 242 LDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI 301
Query: 268 DAITLISRDVTLADRKQMPYTEATILESIRMIASPI--VPHVATQNSSIGGFEVKKDTMI 325
D I + + D+ +MPYTEA + E +R + H ++++ + G+ + K T +
Sbjct: 302 DLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTV 361
Query: 326 FLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFT 385
N Y ++ + W +PE F PERF+++ G K E +PFS GRR C+G + ++ F
Sbjct: 362 ITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRHCLGEHLARMEMFL 421
Query: 386 TLASLFQSYDLKKLPGQQYKV-PIGDLALPYNTFRFNFSPRN 426
+L Q + L + P + L + R+
Sbjct: 422 FFTALLQRFHLHFPHELVPDLKPRLGMTLQPQPYLICAERRH 463
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 139 bits (351), Expect = 2e-37
Identities = 56/454 (12%), Positives = 129/454 (28%), Gaps = 57/454 (12%)
Query: 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFV 88
P P + +L LL + P QA I+ G IF+ + ++ IKE
Sbjct: 4 PQPKTFGELKNLPLLNT-DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE 62
Query: 89 KATDFDGRPNISRYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYE-------- 140
D + + D + K ++ + + Y
Sbjct: 63 SRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAV 122
Query: 141 -----RNERNNNDEEDYVDSL----------LERVYNNRDKAKMDLNTALFSLEDIVGGH 185
N ++ + + + Y + + + S+ +
Sbjct: 123 QLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEA 182
Query: 186 TAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLRM------------------------- 220
+ + K ++ + ++
Sbjct: 183 MNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSDDLLTHMLNGKDPE 242
Query: 221 --SGVHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVT 278
+ + + + + ++ ++ + + + E A L+ +
Sbjct: 243 TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPS 302
Query: 279 LADRKQMPYTEATILESIRM--IASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSP 336
KQ+ Y + E++R+ A + G + ++K + + L+
Sbjct: 303 YKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 362
Query: 337 ELWSE-PENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYD 395
+W + E F+PERF N F PF G+R+C+G + + L + + +D
Sbjct: 363 TIWGDDVEEFRPERFENPSAI--PQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 420
Query: 396 LKKLPGQQYKVPIGDLALPYNTFRFNFSPRNLRL 429
+ + L L F + + L
Sbjct: 421 FEDHTNYELD-IKETLTLKPEGFVVKAKSKKIPL 453
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 120 bits (302), Expect = 9e-31
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 238 GHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIR 297
G+ S+ + + L HP+VQ K+Q+E+DA+ T QM Y + + E++R
Sbjct: 279 GYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLR 338
Query: 298 MI-ASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGR 356
+ + + V ++ I G + K ++ + +Y L+ P+ W+EPE F PERF +
Sbjct: 339 LFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 398
Query: 357 IVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ--YKVPIGDLALP 414
+ P + PF G R+C+G + + L + Q++ K Q K+ +G L P
Sbjct: 399 NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQP 458
Query: 415 YNTFRFNFSPRN 426
R+
Sbjct: 459 EKPVVLKVESRD 470
Score = 63.9 bits (154), Expect = 1e-11
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFV 88
P P LP +G++ + K +G ++ G P + + + IK VL
Sbjct: 12 PGPTPLPFLGNILSYHKG--FCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVK 69
Query: 89 KATD-FDGRPNISRYNDLFSG 108
+ F R + S
Sbjct: 70 ECYSVFTNRRPFGPVGFMKSA 90
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 99.0 bits (245), Expect = 2e-23
Identities = 58/415 (13%), Positives = 114/415 (27%), Gaps = 30/415 (7%)
Query: 34 LPIIGH-LHLLGQYEVPYQAFKVISKTHGS-IFRLKLGVVPAIVVNGLENIKEVLFVKAT 91
+ + L LL + Y K ++ + S +F+ +L I + G E K
Sbjct: 3 DKSLDNSLTLLKE---GYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRF 59
Query: 92 DFDGRPNISRYNDLFSGN------RENCKKLSQM------SKAIRAFVMENLMNDRIVKY 139
LF N + + +
Sbjct: 60 QRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVT 119
Query: 140 ERNERNNNDEEDYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFL 199
+ + + +L RV + +D + A +
Sbjct: 120 RWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGAVGPRHWKGR 179
Query: 200 VNHPNVQAKIQKEVDAITLRMSGVHKLKVIFSL---EDIVGGHTAISNFIMKTLGFLVNH 256
P + I+ ++ + + + G ++ + L
Sbjct: 180 RARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPI 239
Query: 257 PNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRM-IASPIVPHVATQNSSIG 315
+ + A+ + E + E R P + + ++
Sbjct: 240 VAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWN 299
Query: 316 GFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGR----R 371
E KK T + L+ Y N P LW P+ F+PERF + +P GG
Sbjct: 300 NCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREE---NLFDMIPQGGGHAEKGH 356
Query: 372 SCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDL-ALPYNTFRFNFSPR 425
C G + + +L L + +P Q + + +LP + F + R
Sbjct: 357 RCPGEGITIEVMKASLDFLVHQIEY-DVPEQSLHYSLARMPSLPESGFVMSGIRR 410
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 98.3 bits (243), Expect = 4e-23
Identities = 51/384 (13%), Positives = 101/384 (26%), Gaps = 21/384 (5%)
Query: 29 PMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFV 88
+ A P + L + P + H +F L L P ++ E ++ L
Sbjct: 5 SLREAWPYLKDLQ-----QDPLAVLLAWGRAHPRLF-LPLPRFPLALIFDPEGVEGALLA 58
Query: 89 KATDFDGRPN--ISRY--NDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNER 144
+ T +SR L + E+ K+ + K + + + R
Sbjct: 59 EGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFF 118
Query: 145 NNNDEEDYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPN 204
E+ + R + L +
Sbjct: 119 GEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEHALKALDRIMAQTRSPLALLDLA 178
Query: 205 VQAKIQKEVDAITLRMSGVHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQ 264
+A+ +K+ A+ + + L + L+ +
Sbjct: 179 AEARFRKDRGALYREAEALIVHPPLSHLPR---------ERALSEAVTLLVAGHETVASA 229
Query: 265 KEVDAITLISRDVTLADRKQMPYTEATILESIRMIASPIVPHVATQNSSIGGFEVKKDTM 324
+ L R + + + P + E +
Sbjct: 230 LTWSFLLLSHRPDWQKRVAESEEAALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPG 289
Query: 325 IFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISF 384
L + + E F+PERF+ G + PF G+R C+G L
Sbjct: 290 TTLVLSPYVTQRLHFPDGEAFRPERFLEERGT--PSGRYFPFGLGQRLCLGRDFALLEGP 347
Query: 385 TTLASLFQSYDLKKLPGQQYKVPI 408
L + F+ + L LP + +
Sbjct: 348 IVLRAFFRRFRLDPLPFPRVLAQV 371
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 96.3 bits (238), Expect = 3e-22
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 232 LEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTE-- 289
++ G S + L L+ HP V AK+Q+E++ + +R + DR MPYT+
Sbjct: 267 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV 326
Query: 290 ATILESIRMIASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPER 349
++ + +PH T + + + K T I ++ + + + PE F P
Sbjct: 327 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHH 386
Query: 350 FINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQ---YKV 406
F++ G K ++F+PFS G+R C+G + + F L S+ Q+++LK L +
Sbjct: 387 FLDEGGNFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTP 446
Query: 407 PIGDLALPYNTFRFNFSPRN 426
+ A ++ F P +
Sbjct: 447 VVNGFASVPPFYQLCFIPIH 466
Score = 78.2 bits (191), Expect = 3e-16
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 2/139 (1%)
Query: 27 LTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVL 86
L P P LP+IG++ +G + ++ +SK +G +F L G+ P +V++G E +KE L
Sbjct: 4 LPPGPTPLPVIGNILQIGIKD-ISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 62
Query: 87 FVKATDFDGRPNISRYNDLFSGNRENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNN 146
+F GR G + K IR F + L N + K +R
Sbjct: 63 IDLGEEFSGRGIFPLAERANRGFGIVFSN-GKKWKEIRRFSLMTLRNFGMGKRSIEDRVQ 121
Query: 147 NDEEDYVDSLLERVYNNRD 165
+ V+ L + + D
Sbjct: 122 EEARCLVEELRKTKASPCD 140
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 92.2 bits (227), Expect = 5e-21
Identities = 38/382 (9%), Positives = 99/382 (25%), Gaps = 33/382 (8%)
Query: 49 PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVLFVKATDFDGRPNISRYNDLFSG 108
+ + + + G + + V A V+ +K++L D R + + ++
Sbjct: 11 HHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGT 69
Query: 109 NRENCKKLSQMS--------KAIRAFVMENLMNDRIVKYERNERNNNDEEDYVDSLLERV 160
+ + +R V R+ + L
Sbjct: 70 WPLALWVAVENMFTAYGPNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAELPAG 129
Query: 161 YNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLRM 220
+ ++ + + ++G + + + + QA+ Q + +
Sbjct: 130 EPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFRALVDGVFDTTLDQAEAQANTARLYEVL 189
Query: 221 SGVHKLKVIFSLEDIVGGHTA---------------ISNFIMKTLGFLVNHPNVQAKIQK 265
+ K +D+ A + + ++ +
Sbjct: 190 DQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAV 249
Query: 266 EVDAITLISRDVTLADRKQMPYTEATILESIRMIASPIVPHVATQNSSIGGFEVKKDTMI 325
+ L + + + T + G + + I
Sbjct: 250 HTLLTRPDQLALVRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPI 309
Query: 326 FLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFT 385
+ N P+ + + F R + L F G C+G + ++
Sbjct: 310 LASYAAANRHPDWHEDADTFDATRTVKE---------HLAFGHGVHFCLGAPLARMEVTL 360
Query: 386 TLASLFQSYDLKKLPGQQYKVP 407
L SLF + +L ++P
Sbjct: 361 ALESLFGRFPDLRLADPAEELP 382
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 77.6 bits (189), Expect = 4e-16
Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 3/96 (3%)
Query: 333 NMSPELWSEPENFQPERFINADGR-IVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLF 391
N PE + +P +F P R+ ++ ++PF GR C+G + + L
Sbjct: 349 NRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLL 408
Query: 392 QSYDLKKL-PGQQYKVPIGDLAL-PYNTFRFNFSPR 425
+ Y+ + P + Y+ + + + R
Sbjct: 409 REYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR 444
Score = 76.1 bits (185), Expect = 1e-15
Identities = 16/135 (11%), Positives = 34/135 (25%), Gaps = 9/135 (6%)
Query: 27 LTPMPWALPIIGHLHLLGQYEVPYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVL 86
L + GHL P + + G + +L ++++G +
Sbjct: 2 LPRVSGGHDEHGHLEEFRTD--PIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFF 59
Query: 87 FVKATDFDGRPNISRYNDLF-------SGNRENCKKLSQMSKAIRAFVMENLMNDRIVKY 139
D D +F + + L + + V+
Sbjct: 60 RAGDDDLDQAKAYPFMTPIFGEGVVFDASPERRKEMLHNAALRGEQMKGHAATIEDQVRR 119
Query: 140 ERNERNNNDEEDYVD 154
+ E D +D
Sbjct: 120 MIADWGEAGEIDLLD 134
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 73.7 bits (179), Expect = 8e-15
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 9/100 (9%)
Query: 302 PIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPE 361
A ++ + G +K+ I L+ N E++S P+ F RF P
Sbjct: 315 KSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PN 365
Query: 362 HFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPG 401
L F G C+G + +L L +L G
Sbjct: 366 RHLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSG 405
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 73.3 bits (178), Expect = 9e-15
Identities = 47/387 (12%), Positives = 99/387 (25%), Gaps = 31/387 (8%)
Query: 49 PYQAFKVISKTHGSIFRL------KLGVVPAIVVNGLENIKEVL-----FVKATDFDGRP 97
P++ + HG + R+ +LG +G E ++ +L F F
Sbjct: 23 PHEDNFGLRA-HGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEHFTTRPQFTQSK 81
Query: 98 NISRYNDLFSGN---RENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEEDYVD 154
+ + F G + + F + + + + E
Sbjct: 82 SGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGP 141
Query: 155 SLLERVYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVD 214
S + L L D L A + +D
Sbjct: 142 SADLQGLFADPVGAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLD 201
Query: 215 AITLRMSGVHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLIS 274
+ R ++ + G + ++ A + L +
Sbjct: 202 NLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDN 261
Query: 275 RDVTLADRKQMPYTEATILE--SIRMIASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDL 332
+ E + E P +A ++ I G +K + +
Sbjct: 262 PGQIELLFESPEKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMA 321
Query: 333 NMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQ 392
N L +P+ R + F G C+G + + + +L++
Sbjct: 322 NRDEALTPDPDVLDANRA---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWR 372
Query: 393 SYDLKKLPGQQYKVPIGDLALPYNTFR 419
+ PG + VPI ++
Sbjct: 373 -----RFPGLRLAVPIEEVKYRSAFVD 394
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 71.4 bits (173), Expect = 4e-14
Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 14/123 (11%)
Query: 305 PHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFL 364
A ++ IG V+ + I +N N E++ P+ F R P+ L
Sbjct: 287 KRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWP-------PQDPL 339
Query: 365 PFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFSP 424
F G C+ + + T ++L+Q K P + VP+G + Y +
Sbjct: 340 GFGFGDHRCIAEHLAKAELTTVFSTLYQ-----KFPDLKVAVPLGK--INYTPLNRDVGI 392
Query: 425 RNL 427
+L
Sbjct: 393 VDL 395
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 67.5 bits (163), Expect = 7e-13
Identities = 45/389 (11%), Positives = 113/389 (29%), Gaps = 41/389 (10%)
Query: 60 HGSIFRLKL--GVVPAIVVNGLENIKEVL----FVKATDFDGRPNISRYNDLFSGN---- 109
G + R+ L G A +V ++++ V F + D + + + +
Sbjct: 29 EGPVTRISLPNGEGWAWLVTRHDDVRLVTNDPRFGREAVMDRQVTRLAPHFIPARGAVGF 88
Query: 110 ------RENCKKLSQMSKAIRAFVMENLMNDRIVKYERNERNNNDEEDYVDSLLERVYNN 163
+ ++ A + + + D +++
Sbjct: 89 LDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAV------L 142
Query: 164 RDKAKMDLNTALFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLRMSGV 223
+ + + I+ + + ++ + S
Sbjct: 143 SPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDS 202
Query: 224 HKLKVIFSLEDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTL---A 280
V L VG + + L ++ + L ++ +
Sbjct: 203 AGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRS 262
Query: 281 DRKQMPYTEATILESIRMIASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWS 340
+ + P +L I + + +A ++ I G ++ ++++ N PE++
Sbjct: 263 EPEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFP 322
Query: 341 EPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLP 400
+P+ ER P + F G C G + +L S + ++ ++P
Sbjct: 323 DPDRIDFERS---------PNPHVSFGFGPHYCPGGMLARLESELLVDAVLD-----RVP 368
Query: 401 GQQYKVPIGDLALPYNTFRFNFSPRNLRL 429
G + V D +P+ P L +
Sbjct: 369 GLKLAVAPED--VPFKKGALIRGPEALPV 395
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 66.8 bits (161), Expect = 1e-12
Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 26/173 (15%)
Query: 235 IVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILE 294
++ G A + I L+ HP+ A ++++ +P IL
Sbjct: 237 LLAGFEASVSLIGIGTYLLLTHPDQLALVRRD---------------PSALPNAVEEILR 281
Query: 295 SIRMIASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINAD 354
I A + IGG + + + + + N N P+ + +P F R
Sbjct: 282 YIAPP--ETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRD---- 335
Query: 355 GRIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVP 407
L F G CMG + +L L +LF + L V
Sbjct: 336 -----TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVV 383
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 66.4 bits (160), Expect = 2e-12
Identities = 17/133 (12%), Positives = 39/133 (29%), Gaps = 19/133 (14%)
Query: 297 RMIASPIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSE-PENFQPERFINADG 355
S ++ A ++ +G + + ++ L + F R
Sbjct: 279 STPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRT----- 333
Query: 356 RIVKPEHFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPY 415
+ F G C G + ++ + L +L+ + P VP +L
Sbjct: 334 ---SGNRHISFGHGPHVCPGAALSRMEAGVALPALYA-----RFPHLDLAVPAAEL---- 381
Query: 416 NTFRFNFSPRNLR 428
+ + +L
Sbjct: 382 -RNKPVVTQNDLF 393
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 65.6 bits (158), Expect = 2e-12
Identities = 51/378 (13%), Positives = 111/378 (29%), Gaps = 37/378 (9%)
Query: 49 PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLENIKEVL-----FVKATDFDGRPNISRYN 103
P+ A + + + IF G + V+ ++ V V +++ S
Sbjct: 13 PFPAIERL-REATPIFYWDEG--RSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAI 69
Query: 104 DLFSGNRENCKKLSQMS--KAIRAFVMENLMNDRIVKYERNERNNNDEEDYVDSLLERVY 161
S ++ +R V + + I + D+ S E
Sbjct: 70 PELSDMKKYGLFGLPPEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFD 129
Query: 162 NNRDKAKMDLNTALFSL-------EDIVGGHTAISNFIMKTLGFLVNHPNVQAKIQKEVD 214
RD A+ A+ +L ++ + + + + + +
Sbjct: 130 VVRDYAEGIPMRAISALLKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTE 189
Query: 215 AITLRMSGVHKLKVIFSLEDIV--------GGHTAISNFIMKTLGFLVNHPNVQAKIQKE 266
+ L + + + D++ G + ++ +G ++
Sbjct: 190 GLALLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIA 249
Query: 267 VDAITLISRDVTLADRKQMPYTEATILESIR---MIASPIVPHVATQNSSIGGFEVKKDT 323
+ L+ L K P L+ + I A Q+ G +KK
Sbjct: 250 FAVLNLLRSPEALELVKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGE 309
Query: 324 MIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMGNKMVQLIS 383
M+FL ++S P+ F R L + G C G + +L +
Sbjct: 310 MVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCPGVSLARLEA 360
Query: 384 FTTLASLFQSYDLKKLPG 401
+ ++F+ + KL
Sbjct: 361 EIAVGTIFRRFPEMKLKE 378
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 65.2 bits (157), Expect = 4e-12
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 19/125 (15%)
Query: 304 VPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHF 363
P +A ++ ++ G E+KK + + N P L + + R +P
Sbjct: 283 TPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR---------EPIPH 333
Query: 364 LPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFNFS 423
+ F G C+G + +L T L++ + P + P D FR
Sbjct: 334 VAFGHGVHHCLGAALARLELRTVFTELWR-----RFPALRLADPAQDT-----EFRLTTP 383
Query: 424 PRNLR 428
L
Sbjct: 384 AYGLT 388
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 64.0 bits (154), Expect = 8e-12
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 302 PIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPE 361
+P +AT + +G V+K ++ + N PE + P + + +R P
Sbjct: 281 DGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP--------NPT 332
Query: 362 HFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQYKVPIGDLALPYNTFRFN 421
L F G+ C G+ + + + + +L + K+PG VPI L +R
Sbjct: 333 SHLAFGRGQHFCPGSALGRRHAQIGIEALLK-----KMPGVDLAVPIDQL-----VWRTR 382
Query: 422 FSPRNLR 428
F R
Sbjct: 383 FQRRIPE 389
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 61.7 bits (148), Expect = 6e-11
Identities = 44/411 (10%), Positives = 108/411 (26%), Gaps = 24/411 (5%)
Query: 27 LTPMPWALP--IIGHLHLLGQYEV---PYQAFKVISKTHGSIFRLKLGVVPAIVVNGLEN 81
L P+P +P ++ + + +A+ V+ +++ + +
Sbjct: 1 LAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQL 60
Query: 82 IKEVL-----FVKATDFDGRPNISRYNDLFSG-NRENCKKLSQMSKAIRAFVMENLMNDR 135
I+E F F R Y+ + + + ++ ++ + + + + +R
Sbjct: 61 IREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENR 120
Query: 136 IVKYERNERNNNDEEDYVDSLLERVYNNRDKAKMDLNTALFSLEDIVGGHTAISNFIMKT 195
I + + + + + + + M L + T +
Sbjct: 121 IQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGS 180
Query: 196 LGFLVNHPNVQAKIQKEVDAITLRMSGVHKLKVIFSLEDIVGGHTAISNFIMKTLGFLVN 255
+ F + + ++ + V + LV
Sbjct: 181 MTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGR--PITSDEAKRMCGLLLVG 238
Query: 256 HPNVQAKIQKEVDAITLISRDVTLADRKQMPYTEATILESIRMIASPIVPHVATQNSSIG 315
+ S + ++ A E +R + + T +
Sbjct: 239 GLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFH 298
Query: 316 GFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFLPFSGGRRSCMG 375
G ++KK I L + + P + R + F G C+G
Sbjct: 299 GVQLKKGDQILLPQMLSGLDERENACPMHVDFSR---------QKVSHTTFGHGSHLCLG 349
Query: 376 NKMVQLISFTTLASLFQSY-DLKKLPGQQYKVPIGDLALPYNTFRFNFSPR 425
+ + TL D PG Q + + + P
Sbjct: 350 QHLARREIIVTLKEWLTRIPDFSIAPGAQIQHK-SGIVSGVQALPLVWDPA 399
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 56.4 bits (134), Expect = 2e-09
Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 305 PHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPEHFL 364
V + I + + ++ + N E++ +P++F P+R P L
Sbjct: 258 IRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRT---------PNPHL 308
Query: 365 PFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQY 404
F G C+G + +L + L + + +K++ ++
Sbjct: 309 SFGSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKKEK 348
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 53.3 bits (126), Expect = 2e-08
Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 302 PIVPHVATQNSSIGGFEVKKDTMIFLNNYDLNMSPELWSEPENFQPERFINADGRIVKPE 361
+ +G +++ + + N E++ + E F P+R N
Sbjct: 255 MRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNP-------- 306
Query: 362 HFLPFSGGRRSCMGNKMVQLISFTTLASLFQSYDLKKLPGQQY 404
L F G C+G + +L + + + + ++ +
Sbjct: 307 -HLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEK 348
>d2dara2 g.39.1.3 (A:8-52) PDZ and LIM domain protein 5, Enigma
{Human (Homo sapiens) [TaxId: 9606]}
Length = 45
Score = 25.5 bits (56), Expect = 1.9
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 348 ERFINADGRIVKPEHF 363
F+ A G+ PE F
Sbjct: 30 GPFLVALGKSWHPEEF 45
>d2axtc1 f.55.1.1 (C:27-473) Photosystem II CP43 protein PsbC
{Thermosynechococcus elongatus [TaxId: 146786]}
Length = 447
Score = 27.5 bits (61), Expect = 3.2
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 229 IFSLEDIVGGHTAI 242
+ +LED+VGGH I
Sbjct: 201 VNNLEDVVGGHIWI 214
Score = 25.9 bits (57), Expect = 9.8
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 176 FSLEDIVGGHTAI 188
+LED+VGGH I
Sbjct: 202 NNLEDVVGGHIWI 214
>d2axtb1 f.55.1.1 (B:2-489) Photosystem II core light harvesting
protein PsbB {Thermosynechococcus elongatus [TaxId:
146786]}
Length = 488
Score = 27.1 bits (60), Expect = 4.2
Identities = 3/14 (21%), Positives = 6/14 (42%)
Query: 229 IFSLEDIVGGHTAI 242
++ +V H A
Sbjct: 191 PYNPGGVVAHHIAA 204
Score = 26.3 bits (58), Expect = 9.4
Identities = 3/13 (23%), Positives = 6/13 (46%)
Query: 176 FSLEDIVGGHTAI 188
++ +V H A
Sbjct: 192 YNPGGVVAHHIAA 204
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.394
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,574,766
Number of extensions: 74256
Number of successful extensions: 222
Number of sequences better than 10.0: 1
Number of HSP's gapped: 194
Number of HSP's successfully gapped: 37
Length of query: 429
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 341
Effective length of database: 1,199,356
Effective search space: 408980396
Effective search space used: 408980396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.5 bits)